BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005943
(668 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/724 (57%), Positives = 506/724 (69%), Gaps = 89/724 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL+ IV A+RHCG+ +++KQGKS H +IK G S +++ NL+SMYADFT L DA+KL
Sbjct: 1 MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM KNIV+WTTMV+AYTSN +P AI+LY ML+ S PNGFMYS VLKAC L G+
Sbjct: 61 FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
++LGRLIH+R +RE L+YD VL+N LLDMYVKCG L+ RK+FD+ A N W
Sbjct: 121 IELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRA-----NSTSW 175
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+M+SG Y K G +++ + LFN MP+R+VVSW I
Sbjct: 176 NTMISG--------------------------YFKEGLVEEAVNLFNQMPDRNVVSWNTI 209
Query: 239 I------------------------------------------------VGCF------E 244
I + C+ E
Sbjct: 210 IAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLE 269
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
SCF +SALVDMYSNCN L +A +LFDQYS S ++ LWNSM+SGYV++E+N A+
Sbjct: 270 SSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAV 329
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+++ IH SG +DSYT +SALK CINLLN R +QVH LIVTSG+ELDY+VGS L+D
Sbjct: 330 NMIAQIHHSGASVDSYTLSSALKVCINLLNV--RLGIQVHALIVTSGHELDYVVGSILVD 387
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LYA+LGN+K A +LFHRLPKKD+VAWSGL+MGC K LNSLA LFRDM+ +V+Q+I
Sbjct: 388 LYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYI 447
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+S+VLKVCS LAS+ GKQVHAFC+KRG+E E +T+T+LIDMY KCGE++DGL LF +
Sbjct: 448 VSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVA 507
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+RDVV WTGIIVGC QNGRA EA+ F++M+QS LKPNE+T+LGVL+ACRHAGLV EA T
Sbjct: 508 DRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQT 567
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
IF +MK ++ LEP LEHYYCMVDLL QAG F + E+LIAEMPFKPDKTIW+SML AC TH
Sbjct: 568 IFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTH 627
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWI 664
NT LVS IAE LLA P DPS YVMLSN Y TLGMWDSLS+VR+A KKLG K AG SWI
Sbjct: 628 RNTGLVSTIAENLLANCPNDPSIYVMLSNAYGTLGMWDSLSQVREAAKKLGVKAAGTSWI 687
Query: 665 EVSS 668
E+SS
Sbjct: 688 EISS 691
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/724 (55%), Positives = 488/724 (67%), Gaps = 90/724 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL RIV +R CG+ R+ + G+SLH IIK G+ D+F NNLL+MY D + L DA +L
Sbjct: 1 MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE +N+ +WTTM++AY+S+ RP+ A++ Y MLE S PNGF+YSAVLKAC L GD
Sbjct: 61 FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L+ G+LIH R+ R L +DTVLMNTLLDMYVKCGSL+ RK+FD ++++ W
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTS------W 174
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+M+SG Y K G +++ + LF MPE D VSW I
Sbjct: 175 NTMISG--------------------------YGKEGLMEEAVNLFYQMPEPDTVSWNSI 208
Query: 239 IVG--------------------------CFECS-------------------------- 246
I G F C+
Sbjct: 209 IAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFG 268
Query: 247 --CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
CFT SALVD YSNCN L EA K+FD+YS +AS + LWNSM+SGYV+NEQN AI
Sbjct: 269 SCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYVVNEQNSAAI 328
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L+S IHS G +DS+TF SALK CINL NF R LQV GL VTSGYELDY+VGS LID
Sbjct: 329 NLVSQIHSLGAHVDSFTFGSALKVCINLQNF--RLGLQVQGLAVTSGYELDYVVGSILID 386
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LYA G +K AL LF+RLP+KD+V WS LI CTK GLNSL + LFRDM+N + +V+QFI
Sbjct: 387 LYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFI 446
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
ISSVLK CS L L GKQVH+FCVK G+E E IT+TSLID+Y KCGEI+DGLALF
Sbjct: 447 ISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTS 506
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ERD V +TGII+GCGQNGRA EA+ +FQEMI+ LKPNEITFLGVLSACRHAGLVEEAWT
Sbjct: 507 ERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWT 566
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
IF MK EY +EPH+EHYYC+V+LL QAGCF +AE+LIAEMPF+PD+TIW S+L AC TH
Sbjct: 567 IFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTH 626
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWI 664
T+LV+ IAE+LL T PEDPS V LSNVYATL MWD K+R+ KK+G K+AG SWI
Sbjct: 627 KKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEMWDDSRKMREVIKKVGMKEAGKSWI 686
Query: 665 EVSS 668
++ S
Sbjct: 687 QIKS 690
>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/706 (54%), Positives = 491/706 (69%), Gaps = 56/706 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M + I + LRHC R+ K+G ++H + K+G D+F NNL+SMYA+F ++ DA K+
Sbjct: 1 MYVNIIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKV 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +NIV+WTTMV+A+T RP AIRLYN M + S PNG+MYSAVLKAC GD
Sbjct: 61 FDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPK--SETPNGYMYSAVLKACGFVGD 118
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-------NWAASA 171
L LG+LI ERI +KL+ DT+LMN+L+DM+VKCGSL ++F S N S
Sbjct: 119 LGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSG 178
Query: 172 YG------------------NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
Y NV WNSM++G + +R E S+ M+ +
Sbjct: 179 YSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGS---QRALE-----FVSM--MHKR 228
Query: 214 CGEIDDGLALFNFMPERDVVSWTGII-VG----------CFECSCFTLSALVDMYSNCNV 262
C ++DD F F + + G++ +G +E SCFTLSAL+DMYSNCN
Sbjct: 229 CIKLDD----FTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCND 284
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L EA KLFDQ+SS+ AS N+ALWNSM+SGYV+N ++ A+ LLS IH SG +DSYTF
Sbjct: 285 LIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTF 344
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
ALK CINLL+ R LQ+HGLIVT GYELDY+VGS L+DLYA+L N+ AL +FHRL
Sbjct: 345 GGALKVCINLLS--RRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRL 402
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P+KD++AWSGLIMGC + GLN LA+ +F+ M+ +++ F+IS++LKVCS LASLR GK
Sbjct: 403 PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGK 462
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
QVHA CVK G+E E T+TSL+DMY KCGEI+D L LF E+D+VSWTGIIVGCGQNG
Sbjct: 463 QVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNG 522
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+A EA+ +F EMI+S + PNEITFLGVLSACR+AGLVEEA +IF SMK YGLEPHLEHY
Sbjct: 523 KAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHY 582
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CMVDLL G ++AE+LIA MPF+P++T W ++L AC T N+TKL++ +A+ LL +P
Sbjct: 583 CCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATP 642
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
DPS YV LSN YA+LGMW +LSK R+A KK G KKAG+SWIEVSS
Sbjct: 643 NDPSTYVTLSNAYASLGMWHTLSKAREASKKFGIKKAGLSWIEVSS 688
>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/698 (54%), Positives = 482/698 (69%), Gaps = 56/698 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M + I + LRHC R+ K+G ++H + K+G D+F NNL+SMYA+F ++ DA K+
Sbjct: 1 MYVNIIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKV 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +NIV+WTTMV+A+T RP AIRLYN M + S PNG+MYSAVLKAC GD
Sbjct: 61 FDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPK--SETPNGYMYSAVLKACGFVGD 118
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-------NWAASA 171
L LG+LI ERI +KL+ DT+LMN+L+DM+VKCGSL ++F S N S
Sbjct: 119 LGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSG 178
Query: 172 YG------------------NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
Y NV WNSM++G + +R E S+ M+ +
Sbjct: 179 YSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNGS---QRALE-----FVSM--MHKR 228
Query: 214 CGEIDDGLALFNFMPERDVVSWTGII-VG----------CFECSCFTLSALVDMYSNCNV 262
C ++DD F F + + G++ +G +E SCFTLSAL+DMYSNCN
Sbjct: 229 CIKLDD----FTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCND 284
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L EA KLFDQ+SS+ AS N+ALWNSM+SGYV+N ++ A+ LLS IH SG +DSYTF
Sbjct: 285 LIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTF 344
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
ALK CINLL+ R LQ+HGLIVT GYELDY+VGS L+DLYA+L N+ AL +FHRL
Sbjct: 345 GGALKVCINLLS--RRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRL 402
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P+KD++AWSGLIMGC + GLN LA+ +F+ M+ +++ F+IS++LKVCS LASLR GK
Sbjct: 403 PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGK 462
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
QVHA CVK G+E E T+TSL+DMY KCGEI+D L LF E+D+VSWTGIIVGCGQNG
Sbjct: 463 QVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNG 522
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+A EA+ +F EMI+S + PNEITFLGVLSACR+AGLVEEA +IF SMK YGLEPHLEHY
Sbjct: 523 KAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHY 582
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CMVDLL G ++AE+LIA MPF+P++T W ++L AC T N+TKL++ +A+ LL +P
Sbjct: 583 CCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATP 642
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAG 660
DPS YV LSN YA+LGMW +LSK R+A KK G KK G
Sbjct: 643 NDPSTYVTLSNAYASLGMWHTLSKAREASKKFGIKKPG 680
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/718 (50%), Positives = 474/718 (66%), Gaps = 89/718 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL+ I LRHCG+ ++ K+G+S+ +IK G+SQ++F NN++SMY DF L+DAHK+
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM+ +NIV+WTTMV+ YTS+ +PN AI LY ML+ N FMYSAVLKAC L GD
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ LG L++ERI +E L D VLMN+++DMYVK G +L + S++ + WN+
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG----RLIEANSSFKEILRPSSTSWNT 178
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT---- 236
++SG Y K G +D+ + LF+ MP+ +VVSW
Sbjct: 179 LISG--------------------------YCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 237 --------------------GIIVGCFECSC----------------------------- 247
G+++ F C
Sbjct: 213 GFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESS 272
Query: 248 -FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +SAL+DMYSNC L A +F Q S+ VA+WNSM+SG+++NE+NE A+ L
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS---VAVWNSMLSGFLINEENEAALWL 329
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L I+ S +C DSYT + ALK CIN +N R LQVH L+V SGYELDYIVGS L+DL+
Sbjct: 330 LLQIYQSDLCFDSYTLSGALKICINYVNL--RLGLQVHSLVVVSGYELDYIVGSILVDLH 387
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A +GN++ A +LFHRLP KD++A+SGLI GC K G NSLA+ LFR++I D +QFI+S
Sbjct: 388 ANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVS 447
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
++LKVCS LASL GKQ+H C+K+G+E E +T T+L+DMY+KCGEID+G+ LF M ER
Sbjct: 448 NILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER 507
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
DVVSWTGIIVG GQNGR +EA YF +MI ++PN++TFLG+LSACRH+GL+EEA +
Sbjct: 508 DVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTL 567
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+MK EYGLEP+LEHYYC+VDLLGQAG F +A +LI +MP +PDKTIW S+L AC TH N
Sbjct: 568 ETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKN 627
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWI 664
LV++IAE+LL P+DPS Y LSN YATLGMWD LSKVR+A KKLG K++GMSWI
Sbjct: 628 AGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKESGMSWI 685
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/721 (49%), Positives = 477/721 (66%), Gaps = 89/721 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL+ I LRHCG+ ++ K+G+S+ I+K G+SQ++F NN++SMY DF L+DAHK+
Sbjct: 3 MDLKLIAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKV 62
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +NIV+WTTMV+ YT + +P+ AI LY M+E N F+YSAVLKAC L GD
Sbjct: 63 FDEMTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGD 122
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ LG ++ERI +E L+ D VLMN+++DM+VK G L+ + S++ N WN+
Sbjct: 123 IQLGSFVYERIGKENLKGDVVLMNSVVDMFVKNGRLS----EANSSFKEILRPNSTSWNT 178
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++SG Y K G +++ ++LFN +P+ ++VSW +I
Sbjct: 179 LISG--------------------------YCKAGMVEEAVSLFNRIPQPNIVSWNCLIS 212
Query: 241 -------------------------------------------------GC-----FECS 246
GC E S
Sbjct: 213 GFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHGCVVKSGLESS 272
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F LSAL+DMYSNC L +A +F Q + VA+WNSM+SG+++NE+NE A+ L
Sbjct: 273 PFALSALIDMYSNCGSLSDAADVFHQEK---PALCNTVAVWNSMLSGFLINEENEAALGL 329
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L ++ S +C DSYT + ALK CINL+N R LQVH L+V SGYELDYIVGS L+DL+
Sbjct: 330 LLLLYKSDLCFDSYTLSGALKICINLVNL--RLGLQVHSLVVVSGYELDYIVGSILVDLH 387
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A +GN++ A +LFHRLP KD++A+SGLI GC K G NSLA+ LFR++I D +QFI+S
Sbjct: 388 ANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVS 447
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+LKVCS LASL GKQ+H C+K+G++ E +T T+L DMY+KCGEID+ + LF M ER
Sbjct: 448 SILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDGMLER 507
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
DVVSWTGIIVG GQNGR +EA YF +MI S ++PNE+TFLG+LSACRH+GL+EEA +I
Sbjct: 508 DVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSIL 567
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+MK EYGLEP+LEHYYC+VDLLGQAG F +AE+LI +MP +PDKTIW S+L AC TH N
Sbjct: 568 ETMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKN 627
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEV 666
L+++IAE+LL PEDPS Y LSN YATLGMWD LS+VR+A KKLG K++GMSWIE
Sbjct: 628 AGLITVIAEKLLKAFPEDPSLYTSLSNAYATLGMWDQLSEVREAAKKLGAKESGMSWIEF 687
Query: 667 S 667
+
Sbjct: 688 A 688
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/703 (51%), Positives = 476/703 (67%), Gaps = 52/703 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL +I ALR CG+ ++IK KSLH IIK GLS IF N+++S+YA + +DA L
Sbjct: 1 MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +NIVS+TTMV+A+T++ RP+ A+ LYNHMLE +V+PN F+YSAVLKAC L GD
Sbjct: 61 FDEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGD 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL- 177
++LG L+H+ ++ +LE+DTVLMN LLDMYVKCGSL +++F + ++++ + L
Sbjct: 121 VELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILG 180
Query: 178 ------------------------WNSMLSG--------GKQVHAFCVKRGFEKEDVTLT 205
WNS+++G Q + +G + + T
Sbjct: 181 HAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFP 240
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+ GE+ G + II ECSC+ +S+L+DMYSNC +L E
Sbjct: 241 CALKACGLLGELTMGRQIH-----------CCIIKSGLECSCYCISSLIDMYSNCKLLDE 289
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A K+FD+ S A S +A+WNSM+SGYV N A+ +++ +H SG DSYTF+ A
Sbjct: 290 AMKIFDKNSPLAES----LAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIA 345
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK CI N R A QVHGLI+T GYELD++VGS LIDLYA+ GN+ SAL LF RLP K
Sbjct: 346 LKVCIYFDNL--RLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNK 403
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DVVAWS LI+GC + GL +L + LF DM++ + +++ F++S VLKV S LASL+ GKQ+H
Sbjct: 404 DVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIH 463
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+FC+K+G+E E + T+L DMY KCGEI+D LALF + E D +SWTGIIVGC QNGRA
Sbjct: 464 SFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRAD 523
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
+AI+ +MI+S KPN+IT LGVL+ACRHAGLVEEAWTIF S++ E+GL P EHY CM
Sbjct: 524 KAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCM 583
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD+ +AG F +A LI +MPFKPDKTIW S+L AC T+ N L +I+AE LLATSPED
Sbjct: 584 VDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDA 643
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
S Y+MLSNVYA+LGMWD+LSKVR+A +K+G K AG SWIE+ S
Sbjct: 644 SVYIMLSNVYASLGMWDNLSKVREAVRKVGIKGAGKSWIEIFS 686
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/720 (49%), Positives = 463/720 (64%), Gaps = 87/720 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL I A R+C + RSIK KSLH IIK G IF NN++S+Y+ +S+ DA +
Sbjct: 1 MDLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNM 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +NIVSWTTMV+ T++ P+ A+ LYN M+E +PN F+YSAVLKAC L +
Sbjct: 61 FDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRN 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
++LG+++H I + KL+ D VLMN LLDMYVKCGSL D + N WN+
Sbjct: 121 VELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLR----DAQRVFCEIPCKNATSWNT 176
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++ G Y K G IDD + LF+ MPE D+VSW II
Sbjct: 177 LILG--------------------------YAKQGLIDDAMKLFDKMPEPDIVSWNSIIA 210
Query: 241 ------------------------------------GC------------------FECS 246
GC FE S
Sbjct: 211 GLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESS 270
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
C+ +SAL+DMYS+C +L EA K+FDQY +S ++ALWNSM+SG+V+N EA+++
Sbjct: 271 CYCISALIDMYSSCKLLSEATKIFDQYFR-NSSVSESLALWNSMLSGHVVNGDYVEALSM 329
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+SH+H SG+ D YTF+ LK C+N N + A QVHG ++TSGYELD +VGS LID+Y
Sbjct: 330 ISHMHRSGVRFDFYTFSIVLKICMNFDNLS--LASQVHGFVITSGYELDCVVGSILIDIY 387
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A+ G++ +AL LF RLP KDVVAWS LI GC + G + LA+ LF DMI+ ++ F+IS
Sbjct: 388 AKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVIS 447
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
VLK CS LAS + GKQVH+ C+K+G+E E + T+LIDMY KCG+I+D L+LF + E
Sbjct: 448 IVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEI 507
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D +SWT IIVGC QNGRA+EAI+ +MI+S KPN+IT LGVL+ACRH+GLVEEAW +F
Sbjct: 508 DTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVF 567
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
S++ +GL P EHY CMVD+LGQAG F++A +LI+EMPFKPDKTIW+S+L AC T+ N
Sbjct: 568 NSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKN 627
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEV 666
L +I+AE LLATSPED S Y+MLSNVYA LGMWDS+SKVR+ KK+G+K+AG + E+
Sbjct: 628 RDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEI 687
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 164/647 (25%), Positives = 246/647 (38%), Gaps = 166/647 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG R+++ GK +H I + L DI N LL MY SL DA ++F E+ KN
Sbjct: 111 VLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKN 170
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG----------------------- 105
SW T++ Y + A++L++ M E V N
Sbjct: 171 ATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGK 230
Query: 106 ------FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR- 158
F + +VLKAC S +L LGR IH I + E ++ L+DMY C L+
Sbjct: 231 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 290
Query: 159 -KLFDQYSNWAASAYGNVALWNSMLSG--------------------------------- 184
K+FDQY +S ++ALWNSMLSG
Sbjct: 291 TKIFDQYFR-NSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVL 349
Query: 185 -----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID--------------- 218
QVH F + G+E + V + LID+Y K G I+
Sbjct: 350 KICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVV 409
Query: 219 --------------DGLALFNFMP------ERDVVSWTGIIVGC---------------- 242
D LA FM + D + ++ C
Sbjct: 410 AWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLC 469
Query: 243 ----FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+E +AL+DMY+ C + +A LF S + W S+I G N
Sbjct: 470 LKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMS------WTSIIVGCAQNG 523
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLN-----FNSRFALQVHGLIVTSG 351
+ EEAI+LL + SG + T L AC + L+ FNS HGLI
Sbjct: 524 RAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNS--IETNHGLIPCPE 581
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ + ++D+ + G + A++L +P K D WS L+ C + LA ++
Sbjct: 582 HY------NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVA 635
Query: 411 RDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-----DITLTSLI 464
++ S +DV+ +I+ S V + L +V K G ++ +I
Sbjct: 636 EHLLATSPEDVSVYIMLS--NVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYF 693
Query: 465 DMYLKCGEIDDGL-----ALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+L G GL + + E D+VSW +I G N E
Sbjct: 694 MEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYE 740
>gi|147801708|emb|CAN65641.1| hypothetical protein VITISV_018600 [Vitis vinifera]
Length = 869
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/705 (50%), Positives = 430/705 (60%), Gaps = 139/705 (19%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL RIV +R CG+ R+ + G+SLH IIK G+ D+F NNLL+MY D + L DA +L
Sbjct: 1 MDLHRIVSVIRQCGRXRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE +N+ +WTTM++AY+S+ RP+ A++ Y MLE S PNGF+YSAVLKAC L GD
Sbjct: 61 FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L+ G+LIH R+ R L +DTVLMNTLLDMYVKCGSL+ RK+FD ++++ W
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTS------W 174
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+M+SG Y K G +++ + LF MPE D VSW I
Sbjct: 175 NTMISG--------------------------YGKEGLMEEAVNLFYQMPEPDTVSWNSI 208
Query: 239 IVG--------------------------CFECS-------------------------- 246
I G F C+
Sbjct: 209 IAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFG 268
Query: 247 --CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
CFT SALVD YSNCN L EA K+FD+YS +AS + LWNSM+SGYV+NEQN AI
Sbjct: 269 SCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYVVNEQNSAAI 328
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L+S IHS G +DSYTF SALK CINL NF R LQV GL VTSGYELDY+VGS LID
Sbjct: 329 NLVSQIHSLGARVDSYTFGSALKVCINLQNF--RLGLQVQGLAVTSGYELDYVVGSILID 386
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LYA G +K AL LFHRLP+KD+V WS LI TK GLNSL + LFRDM+N + +V+QFI
Sbjct: 387 LYANDGKIKDALRLFHRLPEKDIVVWSSLISWYTKMGLNSLVFSLFRDMVNLDIEVDQFI 446
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
ISSVLK CS L L GKQVH+FCVK G+E E IT+TSLID+Y KCGEI+DGLALF
Sbjct: 447 ISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTS 506
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ERD V +TGII+GCGQNGRA EA+ +FQEMI+ LKPNEITFL
Sbjct: 507 ERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFL----------------- 549
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+AE+LIAEMPF+PD+TIW S+L AC TH
Sbjct: 550 --------------------------------EAEELIAEMPFEPDQTIWNSLLGACGTH 577
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
T+LV+ IAE+LL T PEDPS V LSNVYATL MWD K+R+
Sbjct: 578 KKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEMWDDSRKMRE 622
>gi|302141863|emb|CBI19066.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/568 (48%), Positives = 346/568 (60%), Gaps = 63/568 (11%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW 167
+V++ C GR +H I + + D N LL MYV L R+LFD+
Sbjct: 8 SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDE---- 63
Query: 168 AASAYGNVALWNSMLSG----GKQVHA--FCVKRGFEKEDVTLTSLIDMYLK-CGEIDDG 220
+ NVA W +M+S G+ A F V+ K + L LK CG + D
Sbjct: 64 --TLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD- 120
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
L + R + G ++ L+DMY C L ARK+FD ++++
Sbjct: 121 LESGKLIHGRVFRANLGF-------DTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTS 173
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
WN+MISGY EEA+ L + + +++NS
Sbjct: 174 ------WNTMISGYGKEGLMEEAVNLFYQMPEP-----------------DTVSWNS--- 207
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+ +G+ + LIDLYA G +K AL LF+RLP+KD+V WS LI CTK
Sbjct: 208 -------IIAGFGI-------LIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKM 253
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
GLNSL + LFRDM+N + +V+QFIISSVLK CS L L GKQVH+FCVK G+E E IT+
Sbjct: 254 GLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITV 313
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
TSLID+Y KCGEI+DGLALF ERD V +TGII+GCGQNGRA EA+ +FQEMI+ LK
Sbjct: 314 TSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLK 373
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PNEITFLGVLSACRHAGLVEEAWTIF MK EY +EPH+EHYYC+V+LL QAGCF +AE+
Sbjct: 374 PNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEE 433
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
LIAEMPF+PD+TIW S+L AC TH T+LV+ IAE+LL T PEDPS V LSNVYATL M
Sbjct: 434 LIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEM 493
Query: 641 WDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
WD K+R+ KK+G K+AG SWI++ S
Sbjct: 494 WDDSRKMREVIKKVGMKEAGKSWIQIKS 521
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 283/535 (52%), Gaps = 54/535 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL RIV +R CG+ R+ + G+SLH IIK G+ D+F NNLL+MY D + L DA +L
Sbjct: 1 MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE +N+ +WTTM++AY+S+ RP+ A++ Y MLE S PNGF+YSAVLKAC L GD
Sbjct: 61 FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L+ G+LIH R+ R L +DTVLMNTLLDMYVKCGSL+ RK+FD ++++ W
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTS------W 174
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+M+SG Y K G +++ + LF MPE D VSW I
Sbjct: 175 NTMISG--------------------------YGKEGLMEEAVNLFYQMPEPDTVSWNSI 208
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I G L+D+Y+N + +A +LF + ++ +W+S+IS
Sbjct: 209 IAG--------FGILIDLYANDGKIKDALRLFYRLPE------KDIVVWSSLISWCTKMG 254
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
N +L + + + +D + +S LKAC +L+ S QVH V SGYE + I
Sbjct: 255 LNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGS--GKQVHSFCVKSGYESERIT 312
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++LIDLYA+ G ++ L LF+ ++D V ++G+IMGC ++G A F++MI
Sbjct: 313 VTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGL 372
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N+ VL C + + + + E ++++ + G +
Sbjct: 373 KPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAE 432
Query: 478 ALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
L MP E D W ++ CG + + E + + E + + L P + + L LS
Sbjct: 433 ELIAEMPFEPDQTIWNSLLGACGTH-KKTELVNFIAERLLTTL-PEDPSILVTLS 485
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 37/295 (12%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+D + S ++ C F R +H I+ G D +NL+ +Y + +K A
Sbjct: 1 MDLHRIVSVIRQCGRFRAF--RHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDAR 58
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCL 435
LF +++V W+ +I + G A + M+ S + N F+ S+VLK C +
Sbjct: 59 RLFDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLV 118
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L GK +H + + + + +L+DMY+KCG + +F + SW +I
Sbjct: 119 GDLESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMI 178
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G+ G +EA+ F +M + P+ +++ +++ +G+
Sbjct: 179 SGYGKEGLMEEAVNLFYQMPE----PDTVSWNSIIAG--------------------FGI 214
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++DL G DA +L +P K D +W+S++ C LV
Sbjct: 215 ---------LIDLYANDGKIKDALRLFYRLPEK-DIVVWSSLISWCTKMGLNSLV 259
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/732 (31%), Positives = 377/732 (51%), Gaps = 90/732 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +S++ G +H I K GLS D N+L+++Y+ A KL DE + ++
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDL 122
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+ +++ Y N A+ ++ M G V+ N F +S+VLKACS+ DL +G+ +H
Sbjct: 123 VSWSALISGYAQNGLGGGALMAFHEMHLLG-VKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM------ 181
+ E D + NTL+ MY KC +++LFD+ NV WN++
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER------NVVSWNALFSCYVQ 235
Query: 182 ---------------LSG-----------------------GKQVHAFCVKRGFEKEDVT 203
LSG GK +H + +K G++ + +
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------- 242
+L+DMY K G++ D +++F + + D+VSW +I GC
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLH 355
Query: 243 -------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
E F LVDMYS C++L +AR F+ ++ WN++ISGY
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE------KDLIAWNAIISGYS 409
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
++ EA++L +H G+ + T ++ LK+ L + QVHGL V SG+ D
Sbjct: 410 QYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH--VCRQVHGLSVKSGFHSD 467
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
V ++LID Y + +V+ A +F D+V+++ +I ++G A LF +M +
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++F+ SS+L C+ L++ +GKQ+H +K GF + SL++MY KCG IDD
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 587
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
F + ER +VSW+ +I G Q+G ++A+ F +M++ + PN IT + VL AC H
Sbjct: 588 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGLV EA F SM+ +G +P EHY CM+DLLG+AG ++A +L+ +MPF+ + ++W
Sbjct: 648 AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWG 707
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L A H + +L AE L PE +V+L+N+YA+ G W+++++VR+ +
Sbjct: 708 ALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSK 767
Query: 656 EKK-AGMSWIEV 666
KK GMSWIEV
Sbjct: 768 VKKEPGMSWIEV 779
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 160/625 (25%), Positives = 265/625 (42%), Gaps = 134/625 (21%)
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+++ G+ P YS +L C + L G IH IT+ L D + N L+++Y KC
Sbjct: 46 LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105
Query: 155 SL--TRKLFDQYS-----NWAA--SAYGNVAL----------------------WNSMLS 183
RKL D+ S +W+A S Y L ++S+L
Sbjct: 106 XFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 184 G---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
GKQVH V GFE + +L+ MY KC E D LF+ +PER+VVS
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS 225
Query: 235 WTGII------------VGCF--------ECSCFTLS----------------------- 251
W + VG F + + F+LS
Sbjct: 226 WNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285
Query: 252 ------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
ALVDMY+ L +A +F++ ++ WN++I+G VL+E
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ------PDIVSWNAVIAGCVLHEH 339
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+E+A+ LL + Q+H ++ E D V
Sbjct: 340 HEQALELLGQMKR-----------------------------QLHSSLMKMDMESDLFVS 370
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
L+D+Y++ ++ A F+ LP+KD++AW+ +I G +++ + A LF +M
Sbjct: 371 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 430
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
NQ +S++LK + L + +QVH VK GF + + SLID Y KC ++D +
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ D+VS+T +I Q G+ +EA+ F EM LKP+ +L+AC +
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 550
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E+ + + +YG + +V++ + G DDA + +E+ + + W++M+
Sbjct: 551 EQGKQLHVHIL-KYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIG 608
Query: 600 ACETHNNTKLVSIIAEQLL--ATSP 622
H + + + Q+L SP
Sbjct: 609 GLAQHGHGRQALQLFNQMLKEGVSP 633
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 167/351 (47%), Gaps = 10/351 (2%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++ + +L+ I S +++ L C + R LQ+H I SG D +
Sbjct: 36 EDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSL--RPGLQIHAHITKSGLSDDPSI 93
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++LI+LY++ A +L + D+V+WS LI G ++GL A + F +M
Sbjct: 94 RNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGV 153
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N+F SSVLK CS + LR GKQVH V GFE + +L+ MY KC E D
Sbjct: 154 KCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKR 213
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF +PER+VVSW + Q EA+ F EM+ S +KPNE + +++AC GL
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGL 271
Query: 539 VEEAWTIFTS---MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+ + +K Y +P + +VD+ + G DA + ++ +PD W
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWN 328
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+++ C H + + + Q+ K M S+++ ++G+ D SK
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSK 379
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 364/679 (53%), Gaps = 43/679 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V L C +++ +G L I+ G D+F G L++M+ ++DA K+F
Sbjct: 204 DKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVF 263
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + R+++++WT+M+T +++ A L+ M E G V+P+ + ++LKAC+ L
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEG-VQPDKVAFVSLLKACNHPEAL 322
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+ G+ +H R+ L+ + + LL MY KCGS+ D + NV W +M
Sbjct: 323 EQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSME----DALEVFNLVKGRNVVSWTAM 378
Query: 182 LSG----GKQVHAFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
++G G+ AF ++ G E VT S++ + + G + +
Sbjct: 379 IAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHD------- 431
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
II + +AL+ MY+ C L +AR +F++ S NV WN+MI+
Sbjct: 432 ----RIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ------NVVAWNAMIT 481
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ----VHGLIV 348
YV +E+ + A+ + G+ DS TFTS L C S AL+ V LI+
Sbjct: 482 AYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC------KSPDALELGKWVQSLII 535
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+G+E D + + L+ ++ G++ SA+ LF+ +P++D+V+W+ +I G +HG N A+
Sbjct: 536 RAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD 595
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
F+ M S +Q + +L C+ +L G+++HA + + + + T LI MY
Sbjct: 596 YFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYT 655
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG IDD +F +P+++V SWT +I G Q+GR KEA+ F +M Q +KP+ ITF+G
Sbjct: 656 KCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVG 715
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
LSAC HAGL++E F SMK ++ +EP +EHY CMVDL G+AG +A + I +M K
Sbjct: 716 ALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVK 774
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
PD +W ++L AC+ H + +L +A++ L P D YV+LSN+YA GMW ++K+R
Sbjct: 775 PDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMR 834
Query: 649 KAGKKLG-EKKAGMSWIEV 666
K G KK G SWIEV
Sbjct: 835 KVMLDRGVVKKPGQSWIEV 853
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 156/602 (25%), Positives = 265/602 (44%), Gaps = 117/602 (19%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
YS++L+ C +L G IH I K++ D + N L+ MY KCG+ +++FD+
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP 166
Query: 166 NWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTL------------ 204
+ +V WN +L G Q +H V+ G + + T
Sbjct: 167 D------KDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220
Query: 205 -----------------------TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
T+LI+M++KCG +DD L +FN +P RD+++WT +I G
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280
Query: 242 C-----FECSC------------------------------------------------- 247
F+ +C
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340
Query: 248 -FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ +AL+ MY+ C + +A ++F+ NV W +MI+G+ + + EEA
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKG------RNVVSWTAMIAGFAQHGRMEEAFLF 394
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ + SG+ + TF S L AC Q+H I+ +GY D V + L+ +Y
Sbjct: 395 FNKMIESGIEPNRVTFMSILGACSRPSALKQ--GRQIHDRIIKAGYITDDRVRTALLSMY 452
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A+ G++ A +F R+ K++VVAW+ +I +H A F+ ++ + +
Sbjct: 453 AKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+L VC +L GK V + ++ GFE + +L+ M++ CG++ + LF MPER
Sbjct: 513 SILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER 572
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D+VSW II G Q+G + A YF+ M +S +KP++ITF G+L+AC + E +
Sbjct: 573 DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLH 632
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++ E L+ + ++ + + G DDA + +P K + W SM+ H
Sbjct: 633 -ALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGR 690
Query: 607 TK 608
K
Sbjct: 691 GK 692
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 211/432 (48%), Gaps = 24/432 (5%)
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY----GN--VALWNSMISGYV 295
C C F+ +V +S V+ E F Y++ + +Y GN V + N+ +
Sbjct: 17 CRICVRFSRQFIVS-FSPRLVILEEFDTFRLYTTSFSGSYSKGQGNEFVDIKNTQRANAF 75
Query: 296 LNE-----QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
LN Q EA+ +L + S + I T++S L+ CI N ++H I S
Sbjct: 76 LNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD--GERIHNHIKFS 133
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ D + + LI +YA+ GN SA ++F +P KDV +W+ L+ G +H A+ L
Sbjct: 134 KIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLH 193
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M+ +++ +L C+ ++ +G ++ + + G++ + T+LI+M++KC
Sbjct: 194 EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKC 253
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G +DD L +F +P RD+++WT +I G ++ + K+A FQ M + ++P+++ F+ +L
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
AC H +E+ + MK E GL+ + ++ + + G +DA ++ + + +
Sbjct: 314 KACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR-N 371
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
W +M+ H + + +++ + E P++ +S + A S K
Sbjct: 372 VVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE-PNRVTFMSILGAC-----SRPSALKQ 425
Query: 651 GKKLGEK--KAG 660
G+++ ++ KAG
Sbjct: 426 GRQIHDRIIKAG 437
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/759 (30%), Positives = 385/759 (50%), Gaps = 118/759 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ G+ ++ I K G+ DIF N L++MYA + A ++FD+M K++
Sbjct: 117 LQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDV 176
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW ++ Y + A +L+ M++ SV+P+ + ++L AC+ + ++D GR ++
Sbjct: 177 YSWNLLLGGYVQHGLYEEAFKLHEQMVQ-DSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + + D + L++M++KCG + K+FD ++ W SM++G
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT------RDLVTWTSMITGLAR 289
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK+VHA + G++ E
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------- 244
T+++ MY KCG ++D L +F+ + R+VVSWT +I G +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 245 -----------CSCFTLSAL-------------------------VDMYSNCNVLCEARK 268
+C + SAL + MY+ C L +A +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F++ S NV WN+MI+ YV +EQ + A+ + G+ +S TFTS L
Sbjct: 470 VFEKISK------QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C + + VH LI+ +G E D V + L+ ++ G++ SA LF+ +PK+D+V
Sbjct: 524 CKSSDSL--ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLV 581
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+W+ +I G +HG N +A+ F+ M S ++ + +L C+ +L G+++HA
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
+ F+ + + T LI MY KCG I+D +F +P+++V SWT +I G Q+GR KEA+
Sbjct: 642 TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEAL 701
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M Q +KP+ ITF+G LSAC HAGL+EE F SMK E+ +EP +EHY CMVDL
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDL 760
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
G+AG ++A + I +M +PD +W ++L AC+ H N +L A++ L P D +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V+LSN+YA GMW ++K+RK G KK G SWIEV
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 252/518 (48%), Gaps = 48/518 (9%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
YSA+L+ C +L G I+ I + ++ D + NTL++MY KCG+ +++FD
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR 172
Query: 166 NWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
+V WN +L G Q +H V+ + + T S+++
Sbjct: 173 E------KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+D G L+N I+ ++ F +AL++M+ C + +A K+FD +
Sbjct: 227 VDKGRELYNL-----------ILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT- 274
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
++ W SMI+G + + ++A L + G+ D F S L+AC N
Sbjct: 275 -----RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC------N 323
Query: 337 SRFALQ----VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
AL+ VH + G++ + VG+ ++ +Y + G+++ ALE+F + ++VV+W+
Sbjct: 324 HPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +HG A+L F MI S + N+ S+L CS ++L+RG+Q+ ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ +D T+L+ MY KCG + D +F+ + +++VV+W +I Q+ + A+A FQ
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+++ +KPN TF +L+ C+ + +E W F MK GLE L +V +
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVN 561
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
G A+ L +MP K D W +++ H ++
Sbjct: 562 CGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQV 598
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 206/405 (50%), Gaps = 23/405 (5%)
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T ++L+ + +K + DG ++N + + V + F + L++MY+ C
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGV-----------QPDIFMRNTLINMYAKCGN 160
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
A+++FD +V WN ++ GYV + EEA L + + D TF
Sbjct: 161 TISAKQIFDDMRE------KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTF 214
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S L AC + N + +++ LI+ +G++ D VG+ LI+++ + G++ A ++F L
Sbjct: 215 VSMLNACADARNVDK--GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNL 272
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P +D+V W+ +I G +HG A LF+ M ++ S+L+ C+ +L +GK
Sbjct: 273 PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGK 332
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+VHA + G++ E T+++ MY KCG ++D L +F + R+VVSWT +I G Q+G
Sbjct: 333 KVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEH 561
R EA +F +MI+S ++PN +TF+ +L AC ++ I ++ YG + +
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR- 451
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++ + + G DA ++ ++ K + W +M+ A H
Sbjct: 452 -TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQ 494
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 200/498 (40%), Gaps = 119/498 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V LR C +++QGK +H R+ + G +I+ G +LSMY S+ DA ++FD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSWT M+ + + R + A +N M+E G +EPN + ++L ACS L G+
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQ 433
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
I + I D + LL MY KCGSL ++F++ S NV WN+M++
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK------QNVVAWNAMIT 487
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
GK VH +K G E
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLES 547
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------- 244
+ +L+ M++ CG++ LFN MP+RD+VSW II G +
Sbjct: 548 DLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ 607
Query: 245 -----CSCFTLSALVDMYSNCNVLCEARKLF----------------------------- 270
T + L++ ++ L E R+L
Sbjct: 608 ESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIE 667
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D + + NV W SMI+GY + + +EA+ L + G+ D TF AL AC
Sbjct: 668 DAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727
Query: 331 N-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L +F S + + G ++DL+ R G + A+E ++
Sbjct: 728 HAGLIEEGLHHFQSMKEFNIEPRMEHYGC---------MVDLFGRAGLLNEAVEFIIKMQ 778
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D W L+ C H
Sbjct: 779 VEPDSRVWGALLGACQVH 796
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KD + ++ +K G + A + + +S+ + + S++L++C +L G+++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
+ K G + + +LI+MY KCG +F M E+DV SW ++ G Q+G
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+EA ++M+Q +KP++ TF+ +L+AC A V++ ++ ++ + G + L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY-NLILKAGWDTDLFVGTA 251
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
++++ + G DA ++ +P + D W SM+ H K
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFK 294
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/759 (30%), Positives = 385/759 (50%), Gaps = 118/759 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ G+ ++ I K G+ DIF N L++MYA + A ++FD+M K++
Sbjct: 117 LQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDV 176
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW ++ Y + A +L+ M++ SV+P+ + ++L AC+ + ++D GR ++
Sbjct: 177 YSWNLLLGGYVQHGLYEEAFKLHEQMVQ-DSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + + D + L++M++KCG + K+FD ++ W SM++G
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT------RDLVTWTSMITGLAR 289
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK+VHA + G++ E
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------- 244
T+++ MY KCG ++D L +F+ + R+VVSWT +I G +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 245 -----------CSCFTLSAL-------------------------VDMYSNCNVLCEARK 268
+C + SAL + MY+ C L +A +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F++ S NV WN+MI+ YV +EQ + A+ + G+ +S TFTS L
Sbjct: 470 VFEKISK------QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C + + VH LI+ +G E D V + L+ ++ G++ SA LF+ +PK+D+V
Sbjct: 524 CKSSDSL--ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLV 581
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+W+ +I G +HG N +A+ F+ M S ++ + +L C+ +L G+++HA
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
+ F+ + + T LI MY KCG I+D +F +P+++V SWT +I G Q+GR KEA+
Sbjct: 642 TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEAL 701
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M Q +KP+ ITF+G LSAC HAGL+EE F SMK E+ +EP +EHY CMVDL
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDL 760
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
G+AG ++A + I +M +PD +W ++L AC+ H N +L A++ L P D +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V+LSN+YA GMW ++K+RK G KK G SWIEV
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 252/518 (48%), Gaps = 48/518 (9%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
YSA+L+ C +L G I+ I + ++ D + NTL++MY KCG+ +++FD
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR 172
Query: 166 NWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
+V WN +L G Q +H V+ + + T S+++
Sbjct: 173 E------KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+D G L+N I+ ++ F +AL++M+ C + +A K+FD +
Sbjct: 227 VDKGRELYNL-----------ILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT- 274
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
++ W SMI+G + + ++A L + G+ D F S L+AC N
Sbjct: 275 -----RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC------N 323
Query: 337 SRFALQ----VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
AL+ VH + G++ + VG+ ++ +Y + G+++ ALE+F + ++VV+W+
Sbjct: 324 HPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +HG A+L F MI S + N+ S+L CS ++L+RG+Q+ ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ +D T+L+ MY KCG + D +F+ + +++VV+W +I Q+ + A+A FQ
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+++ +KPN TF +L+ C+ + +E W F MK GLE L +V +
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVN 561
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
G A+ L +MP K D W +++ H ++
Sbjct: 562 CGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQV 598
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 206/405 (50%), Gaps = 23/405 (5%)
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T ++L+ + +K + DG ++N + + V + F + L++MY+ C
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGV-----------QPDIFMWNTLINMYAKCGN 160
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
A+++FD +V WN ++ GYV + EEA L + + D TF
Sbjct: 161 TISAKQIFDDMRE------KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTF 214
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S L AC + N + +++ LI+ +G++ D VG+ LI+++ + G++ A ++F L
Sbjct: 215 VSMLNACADARNVDK--GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNL 272
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P +D+V W+ +I G +HG A LF+ M ++ S+L+ C+ +L +GK
Sbjct: 273 PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGK 332
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+VHA + G++ E T+++ MY KCG ++D L +F + R+VVSWT +I G Q+G
Sbjct: 333 KVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEH 561
R EA +F +MI+S ++PN +TF+ +L AC ++ I ++ YG + +
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR- 451
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++ + + G DA ++ ++ K + W +M+ A H
Sbjct: 452 -TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQ 494
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 200/498 (40%), Gaps = 119/498 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V LR C +++QGK +H R+ + G +I+ G +LSMY S+ DA ++FD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSWT M+ + + R + A +N M+E G +EPN + ++L ACS L G+
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQ 433
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
I + I D + LL MY KCGSL ++F++ S NV WN+M++
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK------QNVVAWNAMIT 487
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
GK VH +K G E
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLES 547
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------- 244
+ +L+ M++ CG++ LFN MP+RD+VSW II G +
Sbjct: 548 DLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ 607
Query: 245 -----CSCFTLSALVDMYSNCNVLCEARKLF----------------------------- 270
T + L++ ++ L E R+L
Sbjct: 608 ESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIE 667
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D + + NV W SMI+GY + + +EA+ L + G+ D TF AL AC
Sbjct: 668 DAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727
Query: 331 N-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L +F S + + G ++DL+ R G + A+E ++
Sbjct: 728 HAGLIEEGLHHFQSMKEFNIEPRMEHYGC---------MVDLFGRAGLLNEAVEFIIKMQ 778
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D W L+ C H
Sbjct: 779 VEPDSRVWGALLGACQVH 796
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KD + ++ +K G + A + + +S+ + + S++L++C +L G+++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
+ K G + + +LI+MY KCG +F M E+DV SW ++ G Q+G
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+EA ++M+Q +KP++ TF+ +L+AC A V++ ++ ++ + G + L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY-NLILKAGWDTDLFVGTA 251
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
++++ + G DA ++ +P + D W SM+ H K
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFK 294
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/761 (31%), Positives = 373/761 (49%), Gaps = 105/761 (13%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R L+ R I K +H +II GL D F N L+++ + +++A +FD+
Sbjct: 28 REFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDK 87
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M KN+++W++MV+ Y+ A+ ++ + PN F+ ++V++AC+ G ++
Sbjct: 88 MPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK 147
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV------ 175
G +H + R + D + +L+D Y K G++ R +FDQ S A + +
Sbjct: 148 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 207
Query: 176 --------ALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVT 203
L+ M L GGKQ+HA+ ++RG E +
Sbjct: 208 CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 267
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------------------- 241
+ LID Y KC + G LF+ M ++++SWT +I G
Sbjct: 268 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 327
Query: 242 ---CFEC-----SC-------------------------FTLSALVDMYSNCNVLCEARK 268
F C SC F + L+DMY+ N+L +A+K
Sbjct: 328 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKK 387
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+FD A NV +N+MI GY E+ EA+ L + TF S L
Sbjct: 388 VFD------VMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGV 441
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+L F + Q+HGLI+ G LD GS LID+Y++ VK A +F + +KD+V
Sbjct: 442 SASL--FALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 499
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ + G T+H N A L+ + S Q N+F ++++ S LASLR G+Q H
Sbjct: 500 VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 559
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
VK G + +L+DMY KCG I++ +F RDVV W +I Q+G A+EA+
Sbjct: 560 VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEAL 619
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F+EM++ ++PN +TF+ VLSAC HAG VE+ F SM P +G++P EHY C+V L
Sbjct: 620 GMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSL 678
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG++G +A++ I +MP +P +W S+L AC N +L AE ++T P+D Y
Sbjct: 679 LGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSY 738
Query: 629 VMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEVSS 668
++LSN++A+ GMW + KVR + K+ G SWIEV++
Sbjct: 739 ILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNN 779
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/762 (31%), Positives = 369/762 (48%), Gaps = 106/762 (13%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+LR AL+ C R++++GK+LH R+++ G D F ++LL+MY L DA +F
Sbjct: 59 ELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVF 118
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M +++V+WT MV+A T+ A+RL+ M E G V PNGF +A LKAC++ DL
Sbjct: 119 DGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVV-PNGFALAAALKACTVGSDL 177
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYS----NWAA----- 169
+H + + + +D + ++L++ YV CG + R L D +W A
Sbjct: 178 GFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEY 237
Query: 170 ---SAYGNVALWNSML-------------------------SGGKQVHAFCVKRGFEKED 201
Y V L L G+ VH +KRG E +
Sbjct: 238 ARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDR 297
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERD------------------------------ 231
V LI+MY KC +D +F + E D
Sbjct: 298 VLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDM 357
Query: 232 --------------VVSWTG-----------IIVGCFECSCFTLSALVDMYSNCNVLCEA 266
V S TG I+ F + A+V MY + +A
Sbjct: 358 GVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDA 417
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
FD ++A WN+++SG+ E + + + G+ + YT+ L
Sbjct: 418 ILAFDLMQG------PDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGIL 471
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+ C +L++ RF QVH ++ SG++ DY V L+D+Y + G +A +F RL ++D
Sbjct: 472 RCCTSLMDL--RFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERD 529
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V +W+ ++ K A FR M+ N+ N +++ L VCS LA L G Q+H+
Sbjct: 530 VFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHS 589
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ +K G+ ++ ++L+DMY+KCG + D LF D+V W II G Q+G +
Sbjct: 590 YTIKSGWNSSVVS-SALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYK 648
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ FQEMI P+EITF+GVLSAC HAGL++E F + YG+ P LEHY CMV
Sbjct: 649 ALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMV 708
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+L +AG +AE LI EMP PD ++W ++L AC H N ++ AE+L + P+D S
Sbjct: 709 DILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDIS 768
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
++LSN+YA L W+ ++K+R G KK G SWIE++
Sbjct: 769 SCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEIN 810
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/759 (30%), Positives = 369/759 (48%), Gaps = 106/759 (13%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L++C ++R + + K +H ++++ G+ DIF N L++MY S+ DAH++F EM R
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++++SW ++++ Y A +L+ M G + PN Y ++L AC +L+ G+
Sbjct: 91 RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI-PNKITYISILTACYSPAELENGKK 149
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--------------------------- 159
IH +I + + D + N+LL MY KCG L R
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209
Query: 160 ------LFDQYSNWAASA----YGNVA---LWNSMLSGGKQVHAFCVKRGFEKEDVTLTS 206
LF Q S+ S Y N+ SML GK++H V+ G + T+
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---------VGCFE------------- 244
L+ M ++CG++D F + +RDVV + +I V FE
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 245 --------CSCFTLSA-------------------------LVDMYSNCNVLCEARKLFD 271
+C T A L+ MY+ C L +AR+LF
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
++ WN++I+GY E EA+ L + S G+ TF L AC N
Sbjct: 390 TMPKR------DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ +H I+ SG + + + + L+++Y R G++ A +F +DV++W+
Sbjct: 444 SSAYAD--GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G +HG AY LF++M N + + +SVL C +L GKQ+H +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G + + +LI+MY++CG + D +F + RDV+SWT +I GC G +AI F
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 512 QEMIQSRLKPNE-ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+M +P + TF +LSAC HAGLV E + IF+SM+ EYG+ P +EHY C+V LLG
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+A F +AE LI +MPF PD +W ++L AC H N L A L + +P+ Y++
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
LSNVYA G WD ++K+R+ + G K+ G SWIEV +
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDN 780
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 11/245 (4%)
Query: 412 DMINSNQ----DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
D+ N++Q + ++ ++L+ C+ L K++HA V+ G + LI+MY
Sbjct: 13 DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY 72
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+KC + D +FK MP RDV+SW +I Q G K+A F+EM + PN+IT++
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYI 132
Query: 528 GVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+L+AC +E I + +K Y +P +++ ++ + G+ G A Q+ A +
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGIS 190
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT--SPEDPSKYVMLSNVYATLGMWDSL 644
+ D + +ML K + Q+ + SP D Y+ L + + T M D
Sbjct: 191 PR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEG 248
Query: 645 SKVRK 649
++ K
Sbjct: 249 KRIHK 253
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/744 (30%), Positives = 372/744 (50%), Gaps = 117/744 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
LH +IK+G S+D N+L+++Y+ A KL DE + ++VSW+++++ Y N
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
A+ ++N M G V+ N F + +VLKACS+ DL++GR +H E D + N
Sbjct: 63 VEEALLVFNEMCLLG-VKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------------ 184
TL+ MY KCG L +R+LF NV WN++ S
Sbjct: 122 TLVVMYAKCGLLDDSRRLF------GGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV 175
Query: 185 --------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
G+++H +K G + + + +L+DMY K GEI+
Sbjct: 176 RSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIE 235
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSC--------------------FTLSA------ 252
+A+F + DVVSW II GC C FTLS+
Sbjct: 236 GAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACA 295
Query: 253 -----------------------------LVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
LVDMYS C ++ +AR+ +D +
Sbjct: 296 AMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK------KD 349
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ WN++ISGY + +A++L S + S + + T ++ LK+ +L + Q+
Sbjct: 350 IIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAI--KVCKQI 407
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H + + SG D+ V ++L+D Y + ++ A ++F +D+VA++ +I +++G
Sbjct: 408 HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDG 467
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A L+ M +++ + FI SS+L C+ L++ +GKQ+H +K GF + SL
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++MY KCG I+D F +P R +VSW+ +I G Q+G KEA+ F +M++ + PN
Sbjct: 528 VNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNH 587
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
IT + VL AC HAGLV E F M+ +G++P EHY CM+DLLG++G ++A +L+
Sbjct: 588 ITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVN 647
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
+PF+ D +W ++L A H N +L A+ L PE +V+L+N+YA+ GMW++
Sbjct: 648 SIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWEN 707
Query: 644 LSKVRKAGKKLGEKK-AGMSWIEV 666
++KVRK K KK GMSWIE+
Sbjct: 708 VAKVRKFMKDSKVKKEPGMSWIEI 731
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 247/587 (42%), Gaps = 114/587 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +R + G+ +H + G D F N L+ MYA L+D+ +LF + +N+
Sbjct: 89 LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNV 148
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW + + Y ++ A+ L+ M+ G + PN F S +L AC+ + DLGR IH
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSG-IMPNEFSISIILNACAGLQEGDLGRKIHG 207
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + L+ D N L+DMY K G + + + + A+ +V WN++++G
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAV----AVFQDIAHPDVVSWNAIIAGCVLHD 263
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G+Q+H+ +K +
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC-------SCF---------- 248
L+DMY KC +DD ++ MP++D+++W +I G +C S F
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF 383
Query: 249 ---TLSALV-----------------------------------DMYSNCNVLCEARKLF 270
TLS ++ D Y CN + EA K+F
Sbjct: 384 NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
++ +W ++ + SMI+ Y EEA+ L + + + D + +S L AC
Sbjct: 444 EE-RTWE-----DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
NL + L VH + G+ D ++L+++YA+ G+++ A F +P + +V+W
Sbjct: 498 NLSAYEQGKQLHVHA--IKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSW 555
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCV 449
S +I G +HG A LF M+ N + SVL C+ + GKQ V
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEV 615
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
G + +ID+ + G++++ + L +P E D W ++
Sbjct: 616 MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALL 662
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+++H ++ G+ D + ++L+ LY++ A +L + DVV+WS L+ G ++
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G A L+F +M N+F SVLK CS L G++VH V GFE +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+L+ MY KCG +DD LF + ER+VVSW + Q+ EA+ F+EM++S +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 521 PNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
PNE + +L+AC AGL E + + + GL+ +VD+ +AG + A
Sbjct: 181 PNEFSISIILNAC--AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ ++ PD W +++ C H+ L ++ +++ + P+ + + S + A
Sbjct: 239 AVFQDIA-HPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR-PNMFTLSSALKACAA 296
Query: 640 M 640
M
Sbjct: 297 M 297
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 173/436 (39%), Gaps = 101/436 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + G+ LH +IK D+F L+ MY+ ++DA + +D M +K+
Sbjct: 290 ALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKD 349
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
I++W +++ Y+ A+ L++ M ++ N S VLK+ + + + + IH
Sbjct: 350 IIAWNALISGYSQCGDHLDAVSLFSKMFSE-DIDFNQTTLSTVLKSVASLQAIKVCKQIH 408
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW-----------AASAYGN- 174
+ + D ++N+LLD Y KC + K+F++ + W A S YG+
Sbjct: 409 TISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT-WEDLVAYTSMITAYSQYGDG 467
Query: 175 ----------------------VALWN-----SMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
+L N S GKQ+H +K GF + SL
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
++MY KCG I+D F+ +P R +VSW+ +I G
Sbjct: 528 VNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG-------------------------- 561
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
Y + +EA+ L + + G+ + T S L
Sbjct: 562 --------------------------YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLC 595
Query: 328 AC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-K 384
AC L+N ++ ++ + + Y + +IDL R G + A+EL + +P +
Sbjct: 596 ACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY---ACMIDLLGRSGKLNEAVELVNSIPFE 652
Query: 385 KDVVAWSGLIMGCTKH 400
D W L+ H
Sbjct: 653 ADGFVWGALLGAARIH 668
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/682 (33%), Positives = 366/682 (53%), Gaps = 41/682 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD R+++ LR C +S+KQGK +H +++ GL DIF NL+++Y + A +
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 61 FDEMARKNIVS-WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD M +S W ++ YT N A+ L+ +L Y ++P+ + Y +VLKAC
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVAL 177
LG++IH + + L D V+ ++L+ MY KC + + LF++ +VA
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPE------KDVAC 174
Query: 178 WNSMLSGGKQVHAF--------CVKR-GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+++S Q F ++R GFE VT+T+ I + +++ G+ +
Sbjct: 175 WNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHE--- 231
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+I F F SALVDMY C L A ++F+Q V WN
Sbjct: 232 --------ELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPK------KTVVAWN 277
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLI 347
SMISGY L + I L +++ G+ T +S + C +F VHG
Sbjct: 278 SMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF---VHGYT 334
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + + D + S+L+DLY + G V+ A +F +PK VV+W+ +I G G A
Sbjct: 335 IRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEAL 394
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF +M S + + +SVL CS LA+L +G+++H +++ + ++ + +L+DMY
Sbjct: 395 GLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMY 454
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG +D+ ++FK +P+RD+VSWT +I G +G+A A+ F EM+QS +KP+ +TFL
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFL 514
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP- 586
+LSAC HAGLV+E F M YG+ P +EHY C++DLLG+AG +A +++ + P
Sbjct: 515 AILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+ D + +++ AC H N L + IA L+ P+D S Y++LSN+YA+ WD +
Sbjct: 575 IRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRV 634
Query: 647 VRKAGKKLGEKK-AGMSWIEVS 667
VR K+LG KK G SWIE++
Sbjct: 635 VRSKMKELGLKKNPGCSWIEIN 656
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/759 (30%), Positives = 378/759 (49%), Gaps = 117/759 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +S++ G +H I K GLS D N+L+++Y+ + A KL DE + ++
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDL 122
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+ +++ Y N A+ ++ M G V+ N F +S+VLKACS+ DL +G+ +H
Sbjct: 123 VSWSALISGYAQNGLGGGALMAFHEMHLLG-VKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM------ 181
+ E D + NTL+ MY KC +++LFD+ NV WN++
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER------NVVSWNALFSCYVQ 235
Query: 182 ---------------LSG-----------------------GKQVHAFCVKRGFEKEDVT 203
LSG GK +H + +K G++ + +
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-------------------------TGI 238
+L+DMY K G++ D +++F + + D+VSW +GI
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGI 355
Query: 239 IVGCF------------------------------ECSCFTLSALVDMYSNCNVLCEARK 268
F E F LVDMYS C++L +AR
Sbjct: 356 CPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 415
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F+ ++ WN++ISGY ++ EA++L +H G+ + T ++ LK+
Sbjct: 416 AFNLLPE------KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 469
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
L + QVHGL V SG+ D V ++LID Y + +V+ A +F D+V
Sbjct: 470 TAGLQVVH--VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLV 527
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+++ +I ++G A LF +M + ++F+ SS+L C+ L++ +GKQ+H
Sbjct: 528 SFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI 587
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
+K GF + SL++MY KCG IDD F + ER +VSW+ +I G Q+G ++A+
Sbjct: 588 LKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQAL 647
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M++ + PN IT + VL AC HAGLV EA F SM+ +G +P EHY CM+DL
Sbjct: 648 QLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDL 707
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AG ++A +L+ +MPF+ + ++W ++L A H + +L AE L PE +
Sbjct: 708 LGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTH 767
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
V+L+N+YA+ G W+++++VR+ + KK GMSWIEV
Sbjct: 768 VLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEV 806
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 170/626 (27%), Positives = 282/626 (45%), Gaps = 107/626 (17%)
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
++++ G+ P YS +L C + L G IH IT+ L D + N L+++Y KC
Sbjct: 45 NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104
Query: 154 GSL--TRKLFDQYS-----NWAA--SAYGNVAL----------------------WNSML 182
+ RKL D+ S +W+A S Y L ++S+L
Sbjct: 105 RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 183 SG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
GKQVH V GFE + +L+ MY KC E D LF+ +PER+VV
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 234 SWTGII------------VGCF--------ECSCFTLS---------------------- 251
SW + VG F + + F+LS
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284
Query: 252 -------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
ALVDMY+ L +A +F++ ++ WN++I+G VL+E
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ------PDIVSWNAVIAGCVLHE 338
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+E+A+ LL + SG+C + +T +SALKAC + Q+H ++ E D V
Sbjct: 339 HHEQALELLGQMKRSGICPNIFTLSSALKACAGM--GLKELGRQLHSSLMKMDMESDLFV 396
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
L+D+Y++ ++ A F+ LP+KD++AW+ +I G +++ + A LF +M
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
NQ +S++LK + L + +QVH VK GF + + SLID Y KC ++D
Sbjct: 457 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 516
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F+ D+VS+T +I Q G+ +EA+ F EM LKP+ +L+AC +
Sbjct: 517 IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSA 576
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E+ + + +YG + +V++ + G DDA + +E+ + + W++M+
Sbjct: 577 FEQGKQLHVHIL-KYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMI 634
Query: 599 KACETHNNTKLVSIIAEQLL--ATSP 622
H + + + Q+L SP
Sbjct: 635 GGLAQHGHGRQALQLFNQMLKEGVSP 660
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 151/311 (48%), Gaps = 10/311 (3%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q+ + +L+ I S +++ L C + R LQ+H I SG D +
Sbjct: 36 QDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSL--RPGLQIHAHITKSGLSDDPSI 93
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++LI+LY++ N A +L + D+V+WS LI G ++GL A + F +M
Sbjct: 94 RNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGV 153
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N+F SSVLK CS + LR GKQVH V GFE + +L+ MY KC E D
Sbjct: 154 KCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKR 213
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF +PER+VVSW + Q EA+ F EM+ S +KPNE + +++AC GL
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGL 271
Query: 539 VEEAWTIFTS---MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+ + +K Y +P + +VD+ + G DA + ++ +PD W
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWN 328
Query: 596 SMLKACETHNN 606
+++ C H +
Sbjct: 329 AVIAGCVLHEH 339
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 168/433 (38%), Gaps = 95/433 (21%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + G+ LH ++K + D+F L+ MY+ L DA F+ + K+
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+++W +++ Y+ A+ L+ M + G + N S +LK+ + + + R +H
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMHKEG-IGFNQTTLSTILKSTAGLQVVHVCRQVH 483
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------YSNWAASAYGN 174
+ D ++N+L+D Y KC + ++F++ + +A G
Sbjct: 484 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 543
Query: 175 VAL-----------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
AL +S+L+ GKQ+H +K GF + SL+
Sbjct: 544 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 603
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+MY KCG IDD F+ + ER +VSW+ +I G
Sbjct: 604 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL-------------------------- 637
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
A +G +A+ L + + G+ + T S L A
Sbjct: 638 --------AQHGHG------------------RQALQLFNQMLKEGVSPNHITLVSVLGA 671
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDV 387
C N + L + G++ + +IDL R G + A+EL +++P + +
Sbjct: 672 C-NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANA 730
Query: 388 VAWSGLIMGCTKH 400
W L+ H
Sbjct: 731 SVWGALLGAARIH 743
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/682 (34%), Positives = 368/682 (53%), Gaps = 41/682 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD R+++ LR +S+KQGK LH +++ GL D++ NL+S+Y + A +
Sbjct: 1 MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60
Query: 61 FDEMARKNIVSWTT-MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD + +S ++ YT N + A+ L++ ++ Y ++P+ + Y +VLKAC
Sbjct: 61 FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+ LG++IH + +E L D V+ ++L+ MY KC KLFD+ + +VA
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD------KDVAC 174
Query: 178 WNSMLS----GGKQVHA---FCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+++S GK A F + R GFE + VT+T+ I + ++D G +
Sbjct: 175 WNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREI----- 229
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+++V+ F F +ALVDMY C L A ++F+Q + V WN
Sbjct: 230 HKELVN------SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPN------KTVVAWN 277
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLI 347
SMI+GY I L ++S G+ T TS L AC +F VHG I
Sbjct: 278 SMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKF---VHGYI 334
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + + D + S+L+DLY + G V+SA +F +PK V+W+ +I G G A
Sbjct: 335 IRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDAL 394
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF +M S + + +SVL CS LA+L +G+++H V+R ++ + +L+DMY
Sbjct: 395 RLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMY 454
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG +++ +FK +PERD+VSWT +I G +GR EA+ F EM+QS +KP+ +TFL
Sbjct: 455 AKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFL 514
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP- 586
+LSAC HAGLV++ F M YG+ P +EHY C++ LLG+AG +A +++ P
Sbjct: 515 AILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPE 574
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
D + +++ AC H N L IAE L+ P+D S Y++LSN+YA+ G WD +
Sbjct: 575 ISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRM 634
Query: 647 VRKAGKKLGEKK-AGMSWIEVS 667
VR K LG KK G SWIE++
Sbjct: 635 VRSKMKDLGLKKNPGCSWIEIN 656
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 356/676 (52%), Gaps = 34/676 (5%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ + L C +++ G+ +H I + G S D+ GN+L+SMYA L A +L
Sbjct: 383 MNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAREL 442
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +++++SW ++ Y + A++LY M G V+P + +L AC+ S
Sbjct: 443 FNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG-VKPGRVTFLHLLSACTNSSA 501
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
G++IHE I R ++ + L N L++MY +CGS+ + + + + ++ WNS
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSI----MEAQNVFEGTRARDIISWNS 557
Query: 181 MLSGGKQVHAFCV---------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M++G Q ++ K G E + +T S++ ++ G +
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML----- 612
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
II + +AL++MY C L +A ++F + NV W +MI
Sbjct: 613 ------IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR------HRNVMSWTAMI 660
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
G+ ++ +A L + + G TF+S LKAC++ + + H I+ SG
Sbjct: 661 GGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAH--ILNSG 718
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
YELD VG+ LI Y++ G++ A ++F ++P +D+++W+ +I G ++GL A
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAY 778
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M +N+F S+L CS ++L GK+VHA VKR + + +LI MY KCG
Sbjct: 779 QMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCG 838
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+++ +F E++VV+W +I Q+G A +A+ +F M + +KP+ TF +LS
Sbjct: 839 SLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILS 898
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H+GLV E IF+S++ ++GL P +EHY C+V LLG+AG F +AE LI +MPF PD
Sbjct: 899 ACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDA 958
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+W ++L AC H N L A L + +P+ YV+LSNVYA G WD ++K+R+
Sbjct: 959 AVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVM 1018
Query: 652 KKLG-EKKAGMSWIEV 666
+ G K+ G SWIEV
Sbjct: 1019 EGRGIRKEPGRSWIEV 1034
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/644 (24%), Positives = 302/644 (46%), Gaps = 80/644 (12%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V+ +++C ++RS+ + K +H ++++ G+ DIF N L++MY S++DAH++F +M R
Sbjct: 86 VDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR 145
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++++SW ++++ Y A +L+ M G + P+ Y ++L AC +L+ G+
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI-PSKITYISILTACCSPAELEYGKK 204
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS- 183
IH +I + D + N+LL+MY KC L R++F + +V +N+ML
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF------SGIYRRDVVSYNTMLGL 258
Query: 184 -GGKQVHAFCV-------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
K C+ G + VT +L+D + +D+G + + S
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS- 317
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
I VG +AL M+ C + A++ + ++ +V ++N++I+
Sbjct: 318 -DIRVG---------TALATMFVRCGDVAGAKQALEAFADR------DVVVYNALIAALA 361
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ EEA + S G+ ++ T+ S L AC + +H I G+ D
Sbjct: 362 QHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGA--GELIHSHISEVGHSSD 419
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+G++LI +YAR G++ A ELF+ +PK+D+++W+ +I G + A L++ M +
Sbjct: 420 VQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS 479
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ +L C+ ++ GK +H ++ G + +L++MY +CG I +
Sbjct: 480 EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F+ RD++SW +I G Q+G + A F EM + L+P++ITF VL C++
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599
Query: 536 A-----------------------------------GLVEEAWTIFTSMKPEYGLEPHLE 560
G +++A+ +F S++ ++
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-----HRNVM 654
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKAC 601
+ M+ G A +L +M FKP K+ ++S+LKAC
Sbjct: 655 SWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKAC 698
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 231/552 (41%), Gaps = 79/552 (14%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
E N Y +++ C+ L + IH ++ + D L N L++MYVKC R +
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKC----RSV 133
Query: 161 FDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCV-----KRGFEKEDVTLTSLIDMY 211
D + + +V WNS++S G + AF + GF +T S++
Sbjct: 134 SDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC 193
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
E++ G + + II ++ ++L++MY C L AR++F
Sbjct: 194 CSPAELEYGKKIH-----------SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF- 241
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA--C 329
+ +V +N+M+ Y EE I L + S G+ D T+ + L A
Sbjct: 242 -----SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTT 296
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
++L+ R +H L V G D VG+ L ++ R G+V A + +DVV
Sbjct: 297 PSMLDEGKR----IHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVV 352
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
++ LI +HG A+ + M + +N+ SVL CS +L G+ +H+
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ G + SLI MY +CG++ LF MP+RD++SW II G + EA+
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472
Query: 510 YFQEMIQSRLKPNEITFLGVLSAC-----------------------------------R 534
+++M +KP +TFL +LSAC R
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDK 591
G + EA +F + + + M+ Q G ++ A +L EM +PDK
Sbjct: 533 RCGSIMEAQNVFEGTRAR-----DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587
Query: 592 TIWASMLKACET 603
+AS+L C+
Sbjct: 588 ITFASVLVGCKN 599
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 412 DMINSNQ----DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL-IDM 466
D+ N+ Q + N+ +++ C+ SL K++HA V+ G DI L++L I+M
Sbjct: 68 DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGV-GPDIFLSNLLINM 126
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+KC + D +F MP RDV+SW +I Q G K+A F+EM + P++IT+
Sbjct: 127 YVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITY 186
Query: 527 LGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+ +L+AC +E I + ++ Y +P +++ ++++ G+ A Q+ + +
Sbjct: 187 ISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI 244
Query: 586 PFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
++ D + +ML + + + + + P D Y+ L + + T M D
Sbjct: 245 -YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 645 SKVRK 649
++ K
Sbjct: 304 KRIHK 308
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/676 (32%), Positives = 349/676 (51%), Gaps = 44/676 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V+ L+ C + + + GK +H I+++G+ +++ N LL +Y S+N+A +LFD+ +
Sbjct: 48 VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN 107
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K++VSW M++ Y A L+ M + G +EP+ F + ++L ACS L+ GR
Sbjct: 108 KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEG-LEPDKFTFVSILSACSSPAALNWGRE 166
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY 172
+H R+ L + + N L+ MY KCGS+ R++FD ++ +A S Y
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 226
Query: 173 GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
+L K HA ++ G +T +++ ++ G + + E +
Sbjct: 227 AQESL--------KTYHAM-LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESE- 276
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+AL MY C + +AR++F+ + +V WN+MI
Sbjct: 277 ----------HHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR------DVIAWNTMIG 320
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
G V + Q EEA + + + D T+ + L AC ++H V G
Sbjct: 321 GLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC--GKEIHARAVKDGL 378
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D G+ LI++Y++ G++K A ++F R+PK+DVV+W+ L+ G G ++ F+
Sbjct: 379 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKK 438
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ + N+ VLK CS +L+ GK++HA VK G + +L+ MY KCG
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGS 498
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++D + + + M RDVV+W +I G QNGR EA+ F+ M ++PN TF+ V+SA
Sbjct: 499 VEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSA 558
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
CR LVEE F SM+ +YG+ P +HY CMVD+L +AG +AE +I MPFKP
Sbjct: 559 CRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAA 618
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L AC H N ++ AEQ L P++ YV LS +YA GMW ++K+RK K
Sbjct: 619 MWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMK 678
Query: 653 KLGEKK-AGMSWIEVS 667
+ G KK G SWIEV+
Sbjct: 679 ERGVKKEPGRSWIEVA 694
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+L ++H G +DSY + L++C+ + QVH I+ G + + + + L+ L
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLA--VGKQVHEHILRFGMKPNVYIINTLLKL 88
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y G+V A LF + K VV+W+ +I G GL A+ LF M + ++F
Sbjct: 89 YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S+L CS A+L G++VH ++ G +LI MY KCG + D +F M
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RD VSWT + ++G A+E++ + M+Q ++P+ IT++ VLSAC +E+ I
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ E + + + + G DA ++ +P + D W +M+
Sbjct: 269 HAQI-VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR-DVIAWNTMI 319
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/679 (32%), Positives = 363/679 (53%), Gaps = 42/679 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL L+ C +R+SI+ G+ + I G+ D G L+ MY L + +F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+++ I W M++ Y+ + +I L+ MLE G ++PN + +S++LK + +
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELG-IKPNSYTFSSILKCFAAVARV 267
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMY-----VKCGSLTRKLFDQYSNWAASAYGNVA 176
+ GR +H I + ++N+L+ Y V+C +KLFD+ ++ +V
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCA---QKLFDELTDR------DVI 318
Query: 177 LWNSMLSGGKQVHAFCVKRGFE--------KEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WNSM+SG V RG E D+ L +++++++ C I G L
Sbjct: 319 SWNSMISG--YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI--GTLLLG--- 371
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
V+ I + + L+DMYS C L A ++F++ V W
Sbjct: 372 --KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE------KTVVSWT 423
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
SMI+GYV ++ AI L + S G+ D Y TS L AC +N N + VH I
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACA--INGNLKSGKIVHDYIR 481
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ E + V + L D+YA+ G++K A ++F + KKDV++W+ +I G TK+ L + A
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALT 541
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF +M ++ + ++ +L C+ LA+L +G+++H + ++ G+ ++ +++DMY+
Sbjct: 542 LFAEMQRESKP-DGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYV 600
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG + +LF +P +D+VSWT +I G G +G EAI F +M + ++P+E++F+
Sbjct: 601 KCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFIS 660
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+L AC H+GL++E W IF MK E +EP+LEHY CMVDLL + G A + I MP K
Sbjct: 661 ILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIK 720
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
PD TIW ++L C H++ KL +AE++ PE+ YV+L+N+YA W+ + K+R
Sbjct: 721 PDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLR 780
Query: 649 KA-GKKLGEKKAGMSWIEV 666
K G++ +K G SWIE+
Sbjct: 781 KKIGQRGLKKNPGCSWIEI 799
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 247/763 (32%), Positives = 366/763 (47%), Gaps = 107/763 (14%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++A R G R + +H + GL D GN L+ +YA + A ++F
Sbjct: 44 DLTCALQACRGRGNRWPLVL--EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF 101
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E++ ++ VSW M++ Y + A RLY+ M + +V P ++ S+VL AC+
Sbjct: 102 KELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQM-HWTAVIPTPYVLSSVLSACTKGKLF 160
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLF------DQY------SNW 167
GR+IH ++ ++ +T + N L+ +Y+ GS L ++F D+ S
Sbjct: 161 AQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGH 220
Query: 168 AASAYGNVAL--WNSM-LSG-----------------------GKQVHAFCVKRGFEKED 201
A +G AL ++ M LSG GKQ+H++ +K G +
Sbjct: 221 AQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY 280
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-------------------------T 236
+T SL+D+Y+KCG+I+ +FN +VV W T
Sbjct: 281 ITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT 340
Query: 237 GI------------------------------IVGCFECSCFTLSALVDMYSNCNVLCEA 266
GI I FE + L+DMYS L +A
Sbjct: 341 GIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKA 400
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
RK+ + +V W SMI+GYV ++ EEA+ + G+ D+ SA
Sbjct: 401 RKILEMLEK------RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC + R LQ+H + SGY D + + L++LYAR G + A LF + KD
Sbjct: 455 SACAGIKAM--RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKD 512
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+ W+GLI G + L A ++F M + N F S + + LA +++GKQVH
Sbjct: 513 EITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
VK G E +LI +Y KCG I+D +F M R+ VSW II C Q+GR E
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLE 632
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M Q LKPN++TF+GVL+AC H GLVEE + F SM YGL P +HY C+V
Sbjct: 633 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG D A + + EMP + IW ++L AC+ H N ++ + A+ LL P D +
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSA 752
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN YA G W + +VRK K G K+ G SWIEV +
Sbjct: 753 SYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++ +++ + E+ ++L++ S + S T AL+AC N L++H V
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGN-RWPLVLEIHATSVVR 72
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G D ++G+ LIDLYA+ G V A ++F L +D V+W ++ G + GL A+ L+
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY 132
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + +++SSVL C+ +G+ +HA K+ F E +LI +YL
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G +F M D V++ +I G Q G + A+ F EM S L+P+ +T +L
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 531 SACRHAGLVEEA 542
+AC G +++
Sbjct: 253 AACASVGDLQKG 264
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 247/763 (32%), Positives = 365/763 (47%), Gaps = 107/763 (14%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++A R G R + +H + GL D GN L+ +YA + A ++F
Sbjct: 44 DLTCALQACRGRGNRWPLVL--EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF 101
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E++ ++ VSW M++ Y A RLY+ M + +V P ++ S+VL AC+
Sbjct: 102 KELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQM-HWTAVIPTPYVLSSVLSACTKGKLF 160
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLF------DQY------SNW 167
GR+IH ++ ++ +T + N L+ +Y+ GS L ++F D+ S
Sbjct: 161 AQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGH 220
Query: 168 AASAYGNVAL--WNSM-LSG-----------------------GKQVHAFCVKRGFEKED 201
A +G AL ++ M LSG GKQ+H++ +K G +
Sbjct: 221 AQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY 280
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-------------------------T 236
+T SL+D+Y+KCG+I+ +FN +VV W T
Sbjct: 281 ITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT 340
Query: 237 GI------------------------------IVGCFECSCFTLSALVDMYSNCNVLCEA 266
GI I FE + L+DMYS L +A
Sbjct: 341 GIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKA 400
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
RK+ + +V W SMI+GYV ++ EEA+ + G+ D+ SA
Sbjct: 401 RKILEMLEK------RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC + R LQ+H + SGY D + + L++LYAR G + A LF + KD
Sbjct: 455 SACAGIKAM--RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKD 512
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+ W+GLI G + L A ++F M + N F S + + LA +++GKQVH
Sbjct: 513 EITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
VK G E +LI +Y KCG I+D +F M R+ VSW II C Q+GR E
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLE 632
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M Q LKPN++TF+GVL+AC H GLVEE + F SM YGL P +HY C+V
Sbjct: 633 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG D A + + EMP + IW ++L AC+ H N ++ + A+ LL P D +
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSA 752
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN YA G W + +VRK K G K+ G SWIEV +
Sbjct: 753 SYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++ +++ + E+ ++L++ S + S T AL+AC N L++H V
Sbjct: 14 LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGN-RWPLVLEIHATSVVR 72
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G D ++G+ LIDLYA+ G V A ++F L +D V+W ++ G + GL A+ L+
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY 132
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + +++SSVL C+ +G+ +HA K+ F E +LI +YL
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G +F M D V++ +I G Q G + A+ F EM S L+P+ +T +L
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 531 SACRHAGLVEEA 542
+AC G +++
Sbjct: 253 AACASVGDLQKG 264
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/678 (33%), Positives = 352/678 (51%), Gaps = 36/678 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + ++ C ++ G+ +H GL+ D++ G+ L+ MY+D L DA F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M ++ V W M+ Y A+RL+ +M G EPN + L C+ DL
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSG-CEPNFATLACFLSVCAAEADL 258
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G +H + LE + + NTLL MY KC R L D + + ++ WN M
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKC----RCLDDAWRLFELLPRDDLVTWNGM 314
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE----------RD 231
+SG CV+ G E + L DM L+ G D + L + +P ++
Sbjct: 315 ISG-------CVQNGLLDEALGL--FCDM-LRSGARPDSVTLVSLLPALTDLNGLKQGKE 364
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
V + II C F +SALVD+Y C + AR L+D AA A +V + +++I
Sbjct: 365 VHGY--IIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYD-----AARAI-DVVIGSTVI 416
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
SGYVLN +E+A+ + ++ + ++ T S L AC ++ ++HG ++ +
Sbjct: 417 SGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALP--LGQEIHGYVLRNA 474
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
YE V S L+D+YA+ G + + +F ++ KD V W+ +I +++G A LFR
Sbjct: 475 YEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFR 534
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M N ISS L C+ L ++ GK++H +K + + ++LIDMY KCG
Sbjct: 535 QMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCG 594
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
++ L +F+FMP+++ VSW II G +G KE++++ M + KP+ +TFL ++S
Sbjct: 595 NMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALIS 654
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC HAGLVEE +F M EY + P +EH+ CMVDL ++G D A Q IA+MPFKPD
Sbjct: 655 ACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDA 714
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
IW ++L AC H N +L I +++L P + YV++SN+ A G WD +SKVR+
Sbjct: 715 GIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLM 774
Query: 652 KKLG-EKKAGMSWIEVSS 668
K K G SW++V++
Sbjct: 775 KDNKILKIPGYSWVDVNN 792
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/682 (33%), Positives = 361/682 (52%), Gaps = 41/682 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD R+++ LR C +S+KQGK +H +++ GL DIF L++ Y + A +
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 61 FDEMARKNIVS-WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD M +S W ++ YT N A+ L+ +L Y ++P+ + Y +V KAC
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVAL 177
LG++IH + + L D V+ ++L+ MY KC + + LF++ +VA
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPE------KDVAC 174
Query: 178 WNSMLSGGKQVHAF--------CVKR-GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+++S Q F ++R GFE VT+T+ I + +++ G+ +
Sbjct: 175 WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHE--- 231
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+I F F SALVDMY C L A ++F+Q V WN
Sbjct: 232 --------ELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPK------KTVVAWN 277
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLI 347
SMISGY L I L +++ G+ T +S + C +F VHG
Sbjct: 278 SMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF---VHGYT 334
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + + D V S+L+DLY + G V+ A ++F +PK VV+W+ +I G G A
Sbjct: 335 IRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEAL 394
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF +M S + + +SVL CS LA+L +GK++H +++ + ++ + +L+DMY
Sbjct: 395 GLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMY 454
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG +D+ ++FK +P+RD+VSWT +I G +G A A+ F EM+QS +KP+ + FL
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFL 514
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP- 586
+LSAC HAGLV+E F M YG+ P +EHY C++DLLG+AG +A +++ + P
Sbjct: 515 AILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+ D + +++ AC H N L + IA L+ P+D S Y++LSN+YA+ WD +
Sbjct: 575 IRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRV 634
Query: 647 VRKAGKKLGEKK-AGMSWIEVS 667
VR K+LG KK G SWIE++
Sbjct: 635 VRSKMKELGLKKNPGCSWIEIN 656
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 343/671 (51%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + QG+ +H + K+G +IF GN ++++Y S A ++F +M ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T+++ + A+ ++ M ++ + P+ S++L AC+ GDL G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ + + D ++ +LLD+YVKCG + L + +S NV LWN ML Q++
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVI----FNSSDRTNVVLWNLMLVAFGQIN 324
Query: 190 A-------FCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
FC + G T ++ EID G + + + TG
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK------TG--- 375
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
FE + L+DMYS L +AR++ + +V W SMI+GYV +E
Sbjct: 376 --FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE------KDVVSWTSMIAGYVQHECC 427
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ + G+ D+ SA+ C IN + R LQ+H I SGY D +
Sbjct: 428 KDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM----RQGLQIHARIYVSGYSGDVSI 483
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L++LYAR G ++ A F + KD + W+GL+ G + GL+ A +F M S
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N F S L + LA +++GKQ+HA +K G E +LI +Y KCG +D
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F M ER+ VSW II C Q+GR EA+ F +M + +KPN++TF+GVL+AC H GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE + F SM EYG+ P +HY C++D+ G+AG D A++ I EMP D +W ++L
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC+ H N ++ A+ LL P D + YV+LSN YA W + +VRK + G K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 658 KAGMSWIEVSS 668
+ G SWIEV +
Sbjct: 784 EPGRSWIEVKN 794
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 209/535 (39%), Gaps = 97/535 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +++G LH + K G+S D +LL +Y + A +F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R N+V W M+ A+ + L+ M G + PN F Y +L+ C+ + ++DLG
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDLGE 365
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV--- 175
IH + E D + L+DMY K G L R++ + +W + G V
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 176 ---------------ALWN------SMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
+W S +SG G Q+HA G+ +
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+L+++Y +CG I + + F + +D ++W G++ G F S L
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG------FAQSGL------------ 527
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+EEA+ + + SG+ + +TF SA
Sbjct: 528 ----------------------------------HEEALKVFMRMDQSGVKHNVFTFVSA 553
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L A NL Q+H ++ +G+ + VG+ LI LY + G+ + A F + ++
Sbjct: 554 LSASANLAEIKQ--GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQV 444
+ V+W+ +I C++HG A LF M N VL CS + + G
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + G +ID++ + G++D + MP D + W ++ C
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSAC 726
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLI 347
++G++ +E + ++L + + F AL+AC N R ++H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG----NGRRWQVVPEIHAKA 68
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
VT G IVG+ LIDLY++ G V A +F L +D V+W ++ G ++GL A
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L+R M + +++SSVL C+ +G+ +HA K GF E ++I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
L+CG +F MP RD V++ +I G Q G + A+ F+EM S L P+ +T
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 528 GVLSACRHAGLVEEA 542
+L+AC G +++
Sbjct: 249 SLLAACASLGDLQKG 263
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL IKQGK +H R+IK G S + GN L+S+Y S DA F EM+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW T++T+ + + R A+ L++ M + G ++PN + VL ACS G ++ G
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLS 183
+ ++ E + ++D++ + G L R K F + AA A +W ++LS
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM----VWRTLLS 724
Query: 184 GGK-----QVHAFCVKRGFEKE 200
K +V F K E E
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELE 746
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK---QVHAFCVKRGFEKEDITLTSLID 465
LF D + + + L+ C + RR + ++HA V RG K I LID
Sbjct: 28 LFADKARQHGGLGPLDFACALRACR--GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+Y K G + +F+ + RD VSW ++ G QNG +EA+ +++M ++ + P
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA--------GCFDD 577
VLS+C A L + I +H +C +G A G F
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQ---------GYKHGFCSEIFVGNAVITLYLRCGSFRL 196
Query: 578 AEQLIAEMPFKPDKTI 593
AE++ +MP + T
Sbjct: 197 AERVFCDMPHRDTVTF 212
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 343/671 (51%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + QG+ +H + K+G +IF GN ++++Y S A ++F +M ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T+++ + A+ ++ M ++ + P+ S++L AC+ GDL G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ + + D ++ +LLD+YVKCG + L + +S NV LWN ML Q++
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVI----FNSSDRTNVVLWNLMLVAFGQIN 324
Query: 190 A-------FCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
FC + G T ++ EID G + + + TG
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK------TG--- 375
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
FE + L+DMYS L +AR++ + +V W SMI+GYV +E
Sbjct: 376 --FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE------KDVVSWTSMIAGYVQHECC 427
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ + G+ D+ SA+ C IN + R LQ+H I SGY D +
Sbjct: 428 KDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM----RQGLQIHARIYVSGYSGDVSI 483
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L++LYAR G ++ A F + KD + W+GL+ G + GL+ A +F M S
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N F S L + LA +++GKQ+HA +K G E +LI +Y KCG +D
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F M ER+ VSW II C Q+GR EA+ F +M + +KPN++TF+GVL+AC H GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE + F SM EYG+ P +HY C++D+ G+AG D A++ I EMP D +W ++L
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC+ H N ++ A+ LL P D + YV+LSN YA W + +VRK + G K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 658 KAGMSWIEVSS 668
+ G SWIEV +
Sbjct: 784 EPGRSWIEVKN 794
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 209/535 (39%), Gaps = 97/535 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +++G LH + K G+S D +LL +Y + A +F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R N+V W M+ A+ + L+ M G + PN F Y +L+ C+ + ++DLG
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDLGE 365
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV--- 175
IH + E D + L+DMY K G L R++ + +W + G V
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 176 ---------------ALWN------SMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
+W S +SG G Q+HA G+ +
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+L+++Y +CG I + + F + +D ++W G++ G F S L
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG------FAQSGL------------ 527
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+EEA+ + + SG+ + +TF SA
Sbjct: 528 ----------------------------------HEEALKVFMRMDQSGVKHNVFTFVSA 553
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L A NL Q+H ++ +G+ + VG+ LI LY + G+ + A F + ++
Sbjct: 554 LSASANLAEIKQ--GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQV 444
+ V+W+ +I C++HG A LF M N VL CS + + G
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + G +ID++ + G++D + MP D + W ++ C
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSAC 726
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLI 347
++G++ +E + ++L + + F AL+AC N R ++H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG----NGRRWQVVPEIHAKA 68
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
VT G IVG+ LIDLY++ G V A +F L +D V+W ++ G ++GL A
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L+R M + +++SSVL C+ +G+ +HA K GF E ++I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
L+CG +F MP RD V++ +I G Q G + A+ F+EM S L P+ +T
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 528 GVLSACRHAGLVEEA 542
+L+AC G +++
Sbjct: 249 SLLAACASLGDLQKG 263
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL IKQGK +H R+IK G S + GN L+S+Y S DA F EM+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW T++T+ + + R A+ L++ M + G ++PN + VL ACS G ++ G
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLS 183
+ ++ E + ++D++ + G L R K F + AA A +W ++LS
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM----VWRTLLS 724
Query: 184 GGK-----QVHAFCVKRGFEKE 200
K +V F K E E
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELE 746
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK---QVHAFCVKRGFEKEDITLTSLID 465
LF D + + + L+ C + RR + ++HA V RG K I LID
Sbjct: 28 LFADKARQHGGLGPLDFACALRACR--GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+Y K G + +F+ + RD VSW ++ G QNG +EA+ +++M ++ + P
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA--------GCFDD 577
VLS+C A L + I +H +C +G A G F
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQ---------GYKHGFCSEIFVGNAVITLYLRCGSFRL 196
Query: 578 AEQLIAEMPFK 588
AE++ +MP +
Sbjct: 197 AERVFCDMPHR 207
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/676 (32%), Positives = 347/676 (51%), Gaps = 44/676 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V+ L+ C + + + GK +H I++ G+ +++ N LL +YA S+N+A +LFD+ +
Sbjct: 32 VKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSN 91
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K++VSW M++ Y A L+ +++ +EP+ F + ++L ACS L+ GR
Sbjct: 92 KSVVSWNVMISGYAHRGLAQEAFNLFT-LMQQERLEPDKFTFVSILSACSSPAVLNWGRE 150
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY 172
IH R+ L DT + N L+ MY KCGS+ R++FD ++ +A S Y
Sbjct: 151 IHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 210
Query: 173 GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G +L K HA +R +T +++ ++ G + + E +
Sbjct: 211 GEESL--------KTYHAMLQER-VRPSRITYMNVLSACGSLAALEKGKQIHAHIVESE- 260
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ +AL MY C +AR++F+ S Y +V WN+MI
Sbjct: 261 ----------YHSDVRVSTALTKMYMKCGAFKDAREVFECLS------YRDVIAWNTMIR 304
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
G+V + Q EEA + G+ D T+T+ L AC ++H G
Sbjct: 305 GFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLAR--GKEIHARAAKDGL 362
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D G+ LI++Y++ G++K A ++F R+PK+DVV+W+ L+ ++ F+
Sbjct: 363 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQ 422
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ N+ VLK CS +L+ GK++HA VK G + +L+ MY KCG
Sbjct: 423 MLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGS 482
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++D + +F+ M RDVV+W +I G GQNGR EA+ ++ M ++PN TF+ VLSA
Sbjct: 483 VEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
CR LVEE F M +YG+ P +HY CMVD+L +AG +AE +I +P KP
Sbjct: 543 CRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAA 602
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L AC H N ++ AE L P++ YV LS +YA GMW ++K+RK K
Sbjct: 603 MWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMK 662
Query: 653 KLGEKK-AGMSWIEVS 667
+ G KK G SWIE++
Sbjct: 663 ERGVKKEPGRSWIEIA 678
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+L ++H G +DSY + L++C+ + QVH I+ G + + + + L+ L
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLA--VGKQVHEHILRCGVKPNVYITNTLLKL 72
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
YA G+V A +LF + K VV+W+ +I G GL A+ LF M + ++F
Sbjct: 73 YAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S+L CS A L G+++H ++ G + +LI MY KCG + D +F M
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RD VSWT + ++G +E++ + M+Q R++P+ IT++ VLSAC +E+ I
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252
Query: 546 FTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + EY + + + + + G F DA ++ + ++ D W +M++
Sbjct: 253 HAHIVESEYHSDVRVS--TALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIRG 305
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/762 (30%), Positives = 378/762 (49%), Gaps = 107/762 (14%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR+ LR C + + +GK++H ++IK G++ D N+L+++YA S N A K+F
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
E+ +++VSWT ++T + + + A+ L+ M G VE N F Y+ LKACS+ DL+
Sbjct: 188 EIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG-VEANEFTYATALKACSMCLDLE 246
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNS 180
G+ +H + D + + L+D+Y KCG L ++F N WN+
Sbjct: 247 FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVF------LCMPKQNAVSWNA 300
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
+L+G G+ VH+ ++ G
Sbjct: 301 LLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIG 360
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------ 244
E ++ L+DMY KCG D L +F + + DVVSW+ II C +
Sbjct: 361 CELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT-CLDQKGQSREAAEVF 419
Query: 245 ---------CSCFTLSALV-------DMY------------------SNCNVLC----EA 266
+ FTL++LV D+Y + CN L +
Sbjct: 420 KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKI 479
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ D + A+ ++ WN+++SG+ NE + + + + + + G + YTF S L
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
++C +L + + QVH IV + + + VG+ L+D+YA+ ++ A +F+RL K+D
Sbjct: 540 RSCSSLSDVD--LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRD 597
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+ AW+ ++ G + G A F M N+F ++S L CS +A+L G+Q+H+
Sbjct: 598 LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS 657
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K G + ++L+DMY KCG ++D +F + RD VSW II G Q+G+ +
Sbjct: 658 MAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGK 717
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F+ M+ P+E+TF+GVLSAC H GL+EE F S+ YG+ P +EHY CMV
Sbjct: 718 ALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMV 777
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG F + E I EM + IW ++L AC+ H N + A +L PE S
Sbjct: 778 DILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDS 837
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
Y++LSN++A GMWD ++ VR G KK G SW+EV+
Sbjct: 838 NYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 879
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/671 (33%), Positives = 354/671 (52%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +S+K GK +H + GL +D+F G++L+ +YA+ L+DA LFD + +K+
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDS 124
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y N AI+++ M + ++PN ++ VL C+ LDLG +H
Sbjct: 125 VLWNVMLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
LE D+ + NTLL MY KC L RKLFD S ++ WN ++SG
Sbjct: 184 IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFD------TSPQSDLVSWNGIISGYVQ 237
Query: 185 ----GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ H F + G + + +T S +L C +++ L+L + + +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFAS----FLPC--VNELLSLKHCKEIHGYIIRHAV 291
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
++ F SAL+D+Y C + A+K+ Q SS+ + + +MISGYVLN
Sbjct: 292 VL-----DVFLKSALIDIYFKCRDVEMAQKILCQSSSF------DTVVCTTMISGYVLNG 340
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+N+EA+ + M S TF+S A L N ++HG I+ + + V
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALN--LGKELHGSIIKTKLDEKCHV 398
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
GS ++D+YA+ G + A +F+R+ +KD + W+ +I C+++G A LFR M
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ IS L C+ L +L GK++H +K + +SLIDMY KCG ++
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRR 518
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M ER+ VSW II G +G KE +A F EM+++ ++P+ +TFLG++SAC HAG
Sbjct: 519 VFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQ 578
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E + M EYG+ +EHY C+ D+ G+AG D+A + I MPF PD +W ++L
Sbjct: 579 VDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLL 638
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC H N +L + ++ L P + YV+L+NV A G W + KVR K+ G +K
Sbjct: 639 GACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRK 698
Query: 659 -AGMSWIEVSS 668
G SWIEV++
Sbjct: 699 VPGYSWIEVNN 709
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/608 (24%), Positives = 249/608 (40%), Gaps = 109/608 (17%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY SL DA LF + +W M+ +T + N+A+ Y ML G V P+ +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG-VSPDKY 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY 164
+ V+KAC + +G+++HE + L+ D + ++L+ +Y + G L+ + LFD
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 165 SNWAASAYGNVALWNSMLSG---------------------------------------- 184
+ LWN ML+G
Sbjct: 120 PQ------KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEA 173
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G Q+H V G E + +L+ MY KC + LF+ P+ D+VSW GII
Sbjct: 174 MLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIIS 233
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G YV N
Sbjct: 234 G----------------------------------------------------YVQNGLM 241
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA L + S+G+ DS TF S L C+N L + + ++HG I+ LD + S
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFL-PCVNEL-LSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LID+Y + +V+ A ++ + D V + +I G +G N A FR ++
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
SS+ + LA+L GK++H +K +++ ++++DMY KCG +D +F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ E+D + W +I C QNGR EAI F++M + + ++ G LSAC + +
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I M + L L ++D+ + G + + ++ M + ++ W S++ A
Sbjct: 480 YGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQER-NEVSWNSIISA 537
Query: 601 CETHNNTK 608
H + K
Sbjct: 538 YGNHGDLK 545
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK +H +IK L D++ ++L+ MYA +LN + ++F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M +N VSW ++++AY ++ + L++ ML G ++P+ + ++ AC +G +
Sbjct: 521 DRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQV 579
Query: 122 DLGRLIHERITRE 134
D G + +T E
Sbjct: 580 DEGIRYYHLMTEE 592
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/705 (31%), Positives = 361/705 (51%), Gaps = 74/705 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ HC + R + GK +H ++ + GL+ DI+ GN+L++ Y+ F + ++F M +++
Sbjct: 85 IEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDV 144
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W++M+ AY N P A + M + ++EPN + ++LKAC+ L+ R IH
Sbjct: 145 VTWSSMIAAYAGNNHPAKAFDTFERMKD-ANIEPNRITFLSILKACNNYSMLEKAREIHT 203
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ +E D + L+ MY KCG SL ++F + NV W +++ Q
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKER------NVVSWTAIIQANAQ 257
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
++ ++ G VT SL++ ++ G + + + ER +
Sbjct: 258 HRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL------ 311
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN- 297
E +AL+ MY CN + +AR+ FD+ S +V W++MI+GY +
Sbjct: 312 -----ETDVVVANALITMYCKCNCIQDARETFDRMSKR------DVISWSAMIAGYAQSG 360
Query: 298 ----EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
E +E LL + G+ + TF S LKAC ++ Q+H I G+E
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC--SVHGALEQGRQIHAEISKVGFE 418
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D + + + ++YA+ G++ A ++F ++ K+VVAW+ L+ K G + A +F +M
Sbjct: 419 SDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEM 478
Query: 414 INSN--------------QDV-----------------NQFIISSVLKVCSCLASLRRGK 442
N D+ ++ I S+L+ C L++L RGK
Sbjct: 479 STRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGK 538
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
VHA VK G E + + TSLI MY KCGE+ + +F + RD V+W ++ G GQ+G
Sbjct: 539 LVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHG 598
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
EA+ F+ M++ R+ PNEITF V+SAC AGLV+E IF M+ ++ ++P +HY
Sbjct: 599 IGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHY 658
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CMVDLLG+AG +AE+ I MP +PD ++W ++L AC++H+N +L A +L P
Sbjct: 659 GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEP 718
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+ S YV LSN+YA G WD +KVRK G KK G S IE+
Sbjct: 719 SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEI 763
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 181/483 (37%), Gaps = 143/483 (29%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C ++ +G+ +H I + GL D+ N L++MY + DA + FD M++
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK 343
Query: 67 KNIVSWTTMV-----TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++++SW+ M+ + Y + + +L M G V PN + ++LKACS+ G L
Sbjct: 344 RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREG-VFPNKVTFMSILKACSVHGAL 402
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA----- 169
+ GR IH I++ E D L + +MY KCGS+ ++F + N WA+
Sbjct: 403 EQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 170 ---------------SAYGNVALWNSMLSGGKQ--------------------------- 187
+ NV WN M++G Q
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522
Query: 188 -----------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
VHA VK G E + V TSLI MY KCGE+ + +F+ + R
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR 582
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D V+W ++ G YG +
Sbjct: 583 DTVAWNAMLAG---------------------------------------YGQHGI---- 599
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
EA+ L + + + TFT+ + AC R L G +
Sbjct: 600 ---------GPEAVDLFKRMLKERVPPNEITFTAVISAC-------GRAGLVQEGREIFR 643
Query: 351 GYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLN 403
+ D+ + ++DL R G ++ A E R+P + D+ W L+ C H
Sbjct: 644 IMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNV 703
Query: 404 SLA 406
LA
Sbjct: 704 QLA 706
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
VN +++ C+ L GK VH + G + SLI+ Y K G++ +
Sbjct: 76 VNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQV 135
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ M RDVV+W+ +I N +A F+ M + ++PN ITFL +L AC + ++
Sbjct: 136 FRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSML 195
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E+A I T +K G+E + ++ + + G A ++ +M + + W ++++
Sbjct: 196 EKAREIHTVVKAS-GMETDVAVATALITMYSKCGEISLACEIFQKMKER-NVVSWTAIIQ 253
Query: 600 ACETHNNTKLVSIIAEQLL 618
A H + E++L
Sbjct: 254 ANAQHRKLNEAFELYEKML 272
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I+ L CG ++++GK +H +K GL D +L+ MY+ + +A +F
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVF 576
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+++ ++ V+W M+ Y + A+ L+ ML+ V PN ++AV+ AC +G +
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKE-RVPPNEITFTAVISACGRAGLV 635
Query: 122 DLGRLIHERITRE 134
GR I RI +E
Sbjct: 636 QEGREIF-RIMQE 647
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/717 (32%), Positives = 358/717 (49%), Gaps = 96/717 (13%)
Query: 20 KQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
K+G+ R + +++ ++ + N ++S Y L +A KLFDEM KN+ SW ++VT
Sbjct: 245 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTG 304
Query: 79 YTSNKRPNWAIRLYNHMLEYGSV------------------------------EPNGFMY 108
Y R + A L++ M E SV P+ ++
Sbjct: 305 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIF 364
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA 168
VL A + DL+L + + E D V+ + +L+ Y + GSL + +
Sbjct: 365 VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPE 424
Query: 169 ASAYGNVALWNSMLSGGKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
+ Y W +M++ Q +R E+ T T+++ Y + G I +
Sbjct: 425 RNEYS----WTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLI 480
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ + +VV+W II G Y+ +L EA+ LF + N
Sbjct: 481 FDEILNPNVVAWNAIIAG---------------YTQNGMLKEAKDLFQKM------PVKN 519
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
A W +MI+G+V NE++ EA+ LL +H SG +FTSAL AC N+ + +
Sbjct: 520 SASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDV--EIGRVI 577
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVK------------------------------ 373
H L + +G + + V + LI +YA+ GNV+
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYML 637
Query: 374 -SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F ++PK+DVV+W+ +I + G +A LF DM+ NQ ++S+L C
Sbjct: 638 DDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
L +++ G+Q HA K GF+ SLI MY KCG +DG +F+ MPE D+++W
Sbjct: 698 GNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWN 756
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++VGC QNG KEAI F++M + P++++FLGVL AC HAGLV+E W F SM +
Sbjct: 757 AVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQK 816
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
YG+ P + HY CMVDLLG+AG +AE LI MP KPD IW ++L AC H N +L
Sbjct: 817 YGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQR 876
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+AE+L + + YV+LSN++A+ GMWD ++++RK K G K+ G+SWI+V +
Sbjct: 877 VAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKN 933
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 150/653 (22%), Positives = 272/653 (41%), Gaps = 118/653 (18%)
Query: 38 IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
+F N + + +A ++F+EM ++++VSW +M+ Y+ N + + A L++
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF-- 228
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
V N ++ +L + G ++ R + E +T E + V N ++ YV+ G L
Sbjct: 229 ---VGKNIRTWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLK 281
Query: 157 -TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
RKLFD+ NVA WNS+++G Y C
Sbjct: 282 NARKLFDEMPE------KNVASWNSVVTG--------------------------YCHCY 309
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECS------------CFTL-----SALVDMYS 258
+ + LF+ MPER+ VSW +I G S C T+ S V + S
Sbjct: 310 RMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLS 369
Query: 259 NCNVLCEARKLFDQYSSWAASAY-GNVALWNSMISGYVLN--------------EQNEEA 303
L + + + Y G+V + +++++ Y N E+NE +
Sbjct: 370 AITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYS 429
Query: 304 -ITLLSHIHSSGMCIDSYTF-------TSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
T+++ G D+ T A K + + + +Q LI +
Sbjct: 430 WTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAM-MTAYAQVGRIQKARLIFDEILNPN 488
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+ + +I Y + G +K A +LF ++P K+ +W+ +I G ++ + A L ++
Sbjct: 489 VVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHR 548
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S + +S L C+ + + G+ +H+ +K G + + LI MY KCG ++D
Sbjct: 549 SGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVED 608
Query: 476 GLALFKF-------------------------------MPERDVVSWTGIIVGCGQNGRA 504
G +F+ MP+RDVVSWT II Q G
Sbjct: 609 GSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHG 668
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+ A+ F +M+ +KPN++T +LSAC + G ++ F ++ + G + L
Sbjct: 669 EVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLFVGNS 727
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
++ + + G ++D + EMP + D W ++L C + K I EQ+
Sbjct: 728 LITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNGLGKEAIKIFEQM 778
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 131/312 (41%), Gaps = 74/312 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA------------------D 50
AL C ++ G+ +H IK G + + N L+SMYA D
Sbjct: 561 ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKD 620
Query: 51 FTS-------------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
S L+DA +F++M ++++VSWT +++AY A+ L+ ML
Sbjct: 621 TVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA 680
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM--NTLLDMYVKCGS 155
G ++PN +++L AC G + LG H I KL +DT L N+L+ MY KCG
Sbjct: 681 RG-IKPNQLTVTSLLSACGNLGAIKLGEQFHALIF--KLGFDTFLFVGNSLITMYFKCG- 736
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTL----------- 204
D + + ++ WN++L G C + G KE + +
Sbjct: 737 ----YEDGFCVFEEMPEHDLITWNAVLVG-------CAQNGLGKEAIKIFEQMEVEGILP 785
Query: 205 --TSLIDMYLKC---GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
S + + C G +D+G A FN M ++ GI+ + +C +VD+
Sbjct: 786 DQMSFLGVLCACSHAGLVDEGWAHFNSMTQK-----YGIMPLVYHYTC-----MVDLLGR 835
Query: 260 CNVLCEARKLFD 271
L EA L +
Sbjct: 836 AGYLSEAEALIE 847
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG +IK G+ H I K G +F GN+L++MY D +F+EM
Sbjct: 690 VTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK-CGYEDGFCVFEEMP 748
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++++W ++ N AI+++ M E + P+ + VL ACS +G +D G
Sbjct: 749 EHDLITWNAVLVGCAQNGLGKEAIKIFEQM-EVEGILPDQMSFLGVLCACSHAGLVDEG 806
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/767 (30%), Positives = 373/767 (48%), Gaps = 127/767 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ G +H +++ G+ F G+ LL +Y + DA ++FD+M+ +N+
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SWT ++ Y I+L+ M+ G V P+ F++ V KACS + +G+ +++
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ E ++ + ++LDM++KCG + R+ F++ + +V +WN M+SG
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE------FKDVFMWNIMVSGYTS 268
Query: 188 VHAF-----CVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALF-------NFMPERD 231
F C+ G + + VT ++I Y + G+ ++ F +F P +
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKP--N 326
Query: 232 VVSWTGIIVGC------FEC------------------------SCFTLS---------- 251
VVSWT +I G FE +C LS
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386
Query: 252 ----------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+LVD Y+ C + AR+ F ++ WN+M++GY
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ------TDLVSWNAMLAGYA 440
Query: 296 LNEQNEEAITLLSH-----------------------------------IHSSGMCIDSY 320
L +EEAI LLS +HS GM ++
Sbjct: 441 LRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTT 500
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T + AL AC + N + ++HG ++ + EL VGS LI +Y+ +++ A +F
Sbjct: 501 TISGALAACGQVRNL--KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
L +DVV W+ +I C + G + A L R+M SN +VN + S L CS LA+LR+
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK++H F ++ G + + L SLIDMY +CG I +F MP+RD+VSW +I G
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G +A+ FQ+ LKPN ITF +LSAC H+GL+EE W F MK EY ++P +E
Sbjct: 679 HGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
Y CMVDLL +AG F++ + I +MPF+P+ +W S+L AC H N L A L
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFEL 798
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
P+ YV+++N+Y+ G W+ +K+R K+ G K G SWIEV
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
CI+ Y S L+ C L +N R QVH +V +G ++ +GS L+++Y + G V+ A
Sbjct: 88 CIEIYA--SILQKCRKL--YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F ++ +++V +W+ ++ G LF M+N + F+ V K CS L
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+ R GK V+ + + GFE S++DM++KCG +D F+ + +DV W ++
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G K+A+ +M S +KP+++T+ ++S +G EEA F M
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF---KPDKTIWASMLKAC 601
+P++ + ++ Q G +A + +M KP+ AS + AC
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL CGQ R++K GK +H +++ + G+ L+SMY+ SL A +F E++
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V W ++++A + R A+ L M +VE N + L ACS L G+
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGK 620
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH+ I R L+ ++N+L+DMY +CGS+ +R++FD ++ WN M+S
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR------DLVSWNVMIS 674
Query: 184 -------GGKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G V+ F R G + +T T+L+ G I++G F M
Sbjct: 675 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G+ + A +L M +N D I +S+L+ C L +LR G QVHA V G + +
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII-VGCGQNGRAKEAIAYFQEMIQS 517
+ L+++Y + G ++D +F M ER+V SWT I+ + CG G +E I F M+
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGL-GDYEETIKLFYLMVNE 184
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC----MVDLLGQAG 573
++P+ F V AC ++ +Y L E C ++D+ + G
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVY-----DYMLSIGFEGNSCVKGSILDMFIKCG 239
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNN-TKLVSIIAEQLLATSPEDPSKYVMLS 632
D A + E+ FK D +W M+ + K + I++ L+ D + +
Sbjct: 240 RMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 633 NVYATLGMWDSLSK 646
+ YA G ++ SK
Sbjct: 299 SGYAQSGQFEEASK 312
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 17/243 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL C + +++QGK +H II+ GL F N+L+ MY S+ + ++FD M
Sbjct: 603 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
++++VSW M++ Y + A+ L+ G ++PN ++ +L ACS SG ++ G
Sbjct: 663 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG-LKPNHITFTNLLSACSHSGLIEEGW 721
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLS 183
+ T ++ ++D+ + G L F + + N A+W S+L
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP----NAAVWGSLL- 776
Query: 184 GGKQVHA------FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVS 234
G ++H + + FE E + + + ++Y G +D + M ER V
Sbjct: 777 GACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 836
Query: 235 WTG 237
G
Sbjct: 837 PPG 839
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/743 (31%), Positives = 368/743 (49%), Gaps = 106/743 (14%)
Query: 23 KSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
K +H I+ G Q D+F N LL Y+ +DA KLFD M +N+V+W++MV+ YT
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A+ L+ + S +PN ++ ++V++AC+ G+L +H + + D
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG---------NVALWNSM---- 181
+ +L+D Y K G + R +FD W A G ++ L+N M
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
L GGKQ+H + ++RGF+ + + +ID YLKC ++ G
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310
Query: 222 ALFNFMPERDVVSWTGIIVGC-------------------------FEC-----SCFTLS 251
LFN + ++DVVSWT +I GC F C SC +L
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370
Query: 252 AL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
AL +DMY+ C+ L ARK+FD ++ NV
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAI------NVVS 424
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
+N+MI GY ++ EA+ L + S TF S L +L + Q+H L
Sbjct: 425 YNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLEL--SSQIHCL 482
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
I+ G LD GS LID+Y++ V A +F + +D+V W+ + G ++ N +
Sbjct: 483 IIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEES 542
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
L++D+ S N+F ++V+ S +ASLR G+Q H +K G + + SL+DM
Sbjct: 543 LKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDM 602
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I++ F +RD+ W +I Q+G A +A+ F+ MI +KPN +TF
Sbjct: 603 YAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTF 662
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+G+LSAC HAGL++ + F SM ++G+EP ++HY CMV LLG+AG +A++ + +MP
Sbjct: 663 VGLLSACSHAGLLDLGFHHFESMS-KFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMP 721
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
KP +W S+L AC + +L + AE ++ P D Y++LSN++A+ GMW S+
Sbjct: 722 IKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRM 781
Query: 647 VR-KAGKKLGEKKAGMSWIEVSS 668
VR K K+ G SWIEV++
Sbjct: 782 VREKMDMSRVVKEPGWSWIEVNN 804
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Query: 335 FNSRFALQVHGLIVTSGY-ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
S + ++H IV G+ + D + + L+ Y+++ A +LF +P +++V WS +
Sbjct: 65 LTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSM 124
Query: 394 IMGCTKHGLNSLAYLLF-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+ T+HG + A LLF R M + ++ N++I++SV++ C+ L +L + Q+H F VK G
Sbjct: 125 VSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGG 184
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F ++ TSLID Y K G +D+ +F + + V+WT II G + GR++ ++ F
Sbjct: 185 FVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFN 244
Query: 513 EMIQSRLKPNEITFLGVLSAC 533
+M + + P+ VLSAC
Sbjct: 245 QMREGDVYPDRYVISSVLSAC 265
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 359/708 (50%), Gaps = 77/708 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHK 59
+DL+ + L+ SI QGK LH K GL Q + N LL MY S+ DAHK
Sbjct: 3 LDLQNLARFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHK 62
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LFDEM +N SW TM+ Y + +IRL++ M N + ++ V + +G
Sbjct: 63 LFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMM-----SNKNDYSWNVVFSGFAKAG 117
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS----------NW 167
++++ R R+ E + V+ N+++ Y + GS +LF + + +
Sbjct: 118 EMEIAR----RLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTF 173
Query: 168 AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + GKQ+HA + E + V +SLI++Y KCG++D + N M
Sbjct: 174 VLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTM 233
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
E D F+LSAL+ Y+N + +AR+ F + S+ V +W
Sbjct: 234 EEPDD---------------FSLSALITGYANHGRMNDARRAFYRKSNSC------VVVW 272
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
NS+ISGYV N + EA L + + G+ +D T + L AC +L N S+ Q+H
Sbjct: 273 NSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCN--SQHGKQMHAYA 330
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL------------------------- 382
G D +V S ID Y++ G++ A +LF L
Sbjct: 331 CKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAK 390
Query: 383 ------PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
P K +++W+ +I+G +++G A LF M + +N+F ++SV+ C+ ++
Sbjct: 391 QIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASIS 450
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
SL G+Q+ A G + +++ TSL+D Y KCG I+ G LF M + D +SW +++
Sbjct: 451 SLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLM 510
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G NG EA+ F EM + ++P EITF GVLSAC H GLV+E W F M+ +Y ++
Sbjct: 511 GYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHID 570
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P +EHY CMVDL +AGC ++A LI MPF+ D ++W+S+L+ C H L +A+Q
Sbjct: 571 PGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQ 630
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSW 663
++ PE+ YV LS+++AT G W+S + VRK ++ +K G SW
Sbjct: 631 IIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSW 678
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/684 (32%), Positives = 347/684 (50%), Gaps = 64/684 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++++ GK +H I + G S D+ GN L+SMYA L A +LF M ++++
Sbjct: 337 LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDL 396
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW ++ Y + A+RLY M G V+P + +L AC+ S G++IHE
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEG-VKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
I R ++ + L N L++MY +CGSL + + + + +V WNSM++G Q
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSL----MEAQNVFEGTQARDVISWNSMIAGHAQ-- 509
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGCFEC 245
G + LF M E D +++ ++ GC
Sbjct: 510 ------------------------HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 246 SCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
L +AL++MY C L +AR +F + +V
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ------HRDVM 599
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
W +MI G ++ +AI L + + G TF+S LK C + + +V
Sbjct: 600 SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDE--GKKVIA 657
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
I+ SGYELD VG+ LI Y++ G++ A E+F ++P +D+V+W+ +I G ++GL
Sbjct: 658 YILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQT 717
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A M + N+F S+L CS ++L GK+VHA VKR + + +LI
Sbjct: 718 AVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALIS 777
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG + +F + E++VV+W +I Q+G A +A+ +F M + +KP+ T
Sbjct: 778 MYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGST 837
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F +LSAC HAGLV E + IF+SM+ EYG+ P +EHY C+V LLG+A F +AE LI +M
Sbjct: 838 FTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 897
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF PD +W ++L AC H N L A L + +P+ Y++LSNVYA G WD ++
Sbjct: 898 PFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVA 957
Query: 646 KVRKAGKKLG-EKKAGMSWIEVSS 668
K+R+ + G K+ G SWIEV +
Sbjct: 958 KIRRVMEGRGIRKEPGRSWIEVDN 981
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/689 (25%), Positives = 305/689 (44%), Gaps = 110/689 (15%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L++C ++R + + K +H ++++ + DIF N L++MY S+ DAH++F EM R
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++++SW ++++ Y A +L+ M G + PN Y ++L AC +L+ G+
Sbjct: 91 RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI-PNKITYISILTACYSPAELENGKK 149
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--------------------------- 159
IH +I + + D + N+LL MY KCG L R
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209
Query: 160 ------LFDQYSNWAASAYGNVALWN--------SMLSGGKQVHAFCVKRGFEKEDVTLT 205
LF Q S+ S V N SML GK++H V+ G + T
Sbjct: 210 VKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---------VGCFE------------ 244
+L+ M ++CG++D F +RDVV + +I V FE
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 245 ---------CSCFTLSA-------------------------LVDMYSNCNVLCEARKLF 270
+C T A L+ MY+ C L +AR+LF
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
++ WN++I+GY E EA+ L + S G+ TF L AC
Sbjct: 389 YTMPKR------DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
N + +H I+ SG + + + + L+++Y R G++ A +F +DV++W
Sbjct: 443 NSSAYAD--GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G +HG AY LF++M N + + +SVL C +L GKQ+H +
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G + + +LI+MY++CG + D +F + RDV+SWT +I GC G +AI
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLL 569
F +M +P + TF +L C + ++E + + Y L+ + + ++
Sbjct: 621 FWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAY 678
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++G DA ++ +MP + D W ++
Sbjct: 679 SKSGSMTDAREVFDKMPSR-DIVSWNKII 706
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/591 (23%), Positives = 254/591 (42%), Gaps = 109/591 (18%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
Y A+L+ C+ L + IH ++ + D L N L++MYVKC R + D + +
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKC----RSVLDAHQVF 85
Query: 168 AASAYGNVALWNSMLS-------------------------------------------- 183
+V WNS++S
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---- 239
GK++H+ +K G++++ SL+ MY KCG++ +F + RDVVS+ ++
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 240 --------VGCF-ECSCFTLSA-------LVDMYSNCNVLCEARKLF------------- 270
+G F + S +S L+D ++ ++L E +++
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 271 ----------------DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
++ +A +V ++N++I+ + N EA + S G
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQ----VHGLIVTSGYELDYIVGSNLIDLYARLG 370
+ ++ T+ S L AC ++ AL+ +H I G+ D +G+ LI +YAR G
Sbjct: 326 VALNRTTYLSILNAC------STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ A ELF+ +PK+D+++W+ +I G + A L++ M + + +L
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ ++ GK +H ++ G + +L++MY +CG + + +F+ RDV+S
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS 499
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G Q+G + A FQEM L+P+ ITF VLS C++ +E I +
Sbjct: 500 WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT 559
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
E GL+ + ++++ + G DA + + + D W +M+ C
Sbjct: 560 -ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
A ++H +V + D + + LI++Y + +V A ++F +P++DV++W+ LI +
Sbjct: 46 AKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQ 105
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G A+ LF +M N+ N+ S+L C A L GK++H+ +K G++++
Sbjct: 106 QGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRV 165
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
SL+ MY KCG++ +F + RDVVS+ ++ Q KE + F +M +
Sbjct: 166 QNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
P+++T++ +L A +++E I + E GL + +V + + G D A+
Sbjct: 226 SPDKVTYINLLDAFTTPSMLDEGKRIH-KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAK 284
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNT 607
Q + D ++ +++ A H +
Sbjct: 285 QAFKGTADR-DVVVYNALIAALAQHGHN 311
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 13/246 (5%)
Query: 412 DMINSNQ----DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL-IDM 466
D+ N++Q + + ++L+ C+ L K++HA V+ + DI L++L I+M
Sbjct: 13 DVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVE-AWVGPDIFLSNLLINM 71
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+KC + D +FK MP RDV+SW +I Q G K+A F+EM + PN+IT+
Sbjct: 72 YVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITY 131
Query: 527 LGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+ +L+AC +E I + +K Y +P +++ ++ + G+ G A Q+ A +
Sbjct: 132 ISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI 189
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT--SPEDPSKYVMLSNVYATLGMWDS 643
+ D + +ML K + Q+ + SP D Y+ L + + T M D
Sbjct: 190 SPR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDE 247
Query: 644 LSKVRK 649
++ K
Sbjct: 248 GKRIHK 253
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C ++++GK +H I+K L D+ G L+SMYA S +A ++FD +
Sbjct: 738 VSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIE 797
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
KN+V+W M+ AY + + A+ +N M + G ++P+G ++++L AC+ +G
Sbjct: 798 KNVVTWNAMINAYAQHGLASKALGFFNCMEKEG-IKPDGSTFTSILSACNHAG 849
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/667 (32%), Positives = 341/667 (51%), Gaps = 34/667 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + K G+ LH I+K+GLS + F N L+++Y+ + +L A ++F +M R++
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR 279
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+S+ ++++ + A++L+ M + ++P+ +++L AC+ G G+ +H
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKM-QLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ + + D ++ +LLD+YVKC + + + + NV LWN ML Q+
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETA----HEYFLTTETENVVLWNVMLVAYGQLG 394
Query: 190 AFCVK---------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G T S++ G +D G + T +I
Sbjct: 395 NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH-----------TQVIK 443
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L AR + + +V W +MI+GY ++
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE------EDVVSWTAMIAGYTQHDLF 497
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + + G+ D+ F+SA+ AC + N Q+H SGY D +G+
Sbjct: 498 AEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ--GQQIHAQSYISGYSEDLSIGN 555
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LYAR G + A F ++ KD ++W+ LI G + G A +F M + +
Sbjct: 556 ALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEA 615
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F S + + A++++GKQ+HA +K G++ E LI +Y KCG I+D F
Sbjct: 616 NLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREF 675
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MPE++VVSW +I G Q+G EA++ F+EM Q L PN +TF+GVLSAC H GLV
Sbjct: 676 FEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVN 735
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E + F SM E+GL P EHY C+VDLLG+A A + I EMP +PD IW ++L A
Sbjct: 736 EGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSA 795
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A LL PED + YV+LSN+YA G WD + R+ K G KK
Sbjct: 796 CTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEP 855
Query: 660 GMSWIEV 666
G SWIEV
Sbjct: 856 GRSWIEV 862
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 169/695 (24%), Positives = 312/695 (44%), Gaps = 98/695 (14%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S+ K LH RI K G + G+ L+ +Y +++A KLFD++ N+ W
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS-GDLDLGRLIHERI 131
+++ + K + + L++ M+ +V P+ +++VL+ACS + IH +I
Sbjct: 80 NKVISGLLAKKLASQVLGLFSLMIT-ENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 132 TREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQY-----SNWAASAYG----------- 173
++ N L+D+Y K G L + +F++ +W A G
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198
Query: 174 -------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMY 211
+++S+LS G+Q+H F VK G E +L+ +Y
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLY 258
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------CFECSCFTLS 251
+ G + +F+ M RD +S+ +I G C + C T++
Sbjct: 259 SRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318
Query: 252 AL--------------------VDMYSNCNVLCEAR------KLFD---QYSSWAASAYG 282
+L + M + +++ E K FD + + +
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE 378
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV LWN M+ Y E+ + + G+ + YT+ S L+ C +L + Q
Sbjct: 379 NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALD--LGEQ 436
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H ++ SG++ + V S LID+YA+ G + +A + RL ++DVV+W+ +I G T+H L
Sbjct: 437 IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDL 496
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-T 461
+ A LF++M N + SS + C+ + +L +G+Q+HA G+ ED+++
Sbjct: 497 FAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGY-SEDLSIGN 555
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+ +Y +CG D F+ + +D +SW +I G Q+G +EA+ F +M Q+ ++
Sbjct: 556 ALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEA 615
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N TF +SA + +++ I +M + G + E ++ L + G +DA++
Sbjct: 616 NLFTFGSAVSATANTANIKQGKQIH-AMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674
Query: 582 IAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAE 615
EMP K + W +M+ H ++ VS+ E
Sbjct: 675 FFEMPEK-NVVSWNAMITGYSQHGYGSEAVSLFEE 708
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 220/541 (40%), Gaps = 118/541 (21%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+E + N Y + + C SG L + +H RI + + + VL + L+D+Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 156 LTR--KLFDQYSNWAASAYGNVALWNSML------------------------------- 182
+ KLFD + NV+ WN ++
Sbjct: 61 VDNAIKLFDDIPS------SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTF 114
Query: 183 -------SGGK-------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
SGGK Q+HA + GF + LID+Y K G +D +F +
Sbjct: 115 ASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF 174
Query: 229 ERDVVSWTGIIVG-----------------------------------CFECSCFTL--- 250
+D VSW +I G C + F L
Sbjct: 175 LKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQ 234
Query: 251 -----------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ALV +YS L A ++F + +Y NS+ISG
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY------NSLISG 288
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGY 352
++ A+ L + M D T S L AC ++ + + Q+H ++ G
Sbjct: 289 LAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGK---QLHSYVIKMGM 345
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D I+ +L+DLY + ++++A E F ++VV W+ +++ + G S +Y +F
Sbjct: 346 SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQ 405
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M NQ+ S+L+ C+ L +L G+Q+H +K GF+ + LIDMY K GE
Sbjct: 406 MQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGE 465
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+D + + + E DVVSWT +I G Q+ EA+ FQEM ++ + I F +SA
Sbjct: 466 LDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISA 525
Query: 533 C 533
C
Sbjct: 526 C 526
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 194/503 (38%), Gaps = 120/503 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C + +GK LH +IK G+S D+ +LL +Y + AH+ F
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF 372
Query: 62 DEMARKNIVSWTTMVTAYTS--NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+N+V W M+ AY N ++ I L ++ + PN + Y ++L+ C+ G
Sbjct: 373 LTTETENVVLWNVMLVAYGQLGNLSESYWIFL---QMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--------------------- 158
LDLG IH ++ + +++ + + L+DMY K G L
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489
Query: 159 ------------KLFDQYSNWAASAYGNVALWNSM--------LSGGKQVHAFCVKRGFE 198
KLF + N + N+ +++ L+ G+Q+HA G+
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRS-DNIGFSSAISACAGIQALNQGQQIHAQSYISGYS 548
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC---------------- 242
++ +L+ +Y +CG D F + +D +SW +I G
Sbjct: 549 EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQM 608
Query: 243 ----FECSCFTLSA-----------------------------------LVDMYSNCNVL 263
E + FT + L+ +YS C +
Sbjct: 609 NQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSI 668
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+A++ F + NV WN+MI+GY + EA++L + G+ + TF
Sbjct: 669 EDAKREFFEMPE------KNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 722
Query: 324 SALKACINLLNFNS-----RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
L AC ++ N R + HGL+ + Y+ ++DL R + A E
Sbjct: 723 GVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEH---YVC---VVDLLGRAALLCCAREF 776
Query: 379 FHRLP-KKDVVAWSGLIMGCTKH 400
+P + D + W L+ CT H
Sbjct: 777 IEEMPIEPDAMIWRTLLSACTVH 799
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C SL K++HA K GF+ ED+ + LID+YL GE+D+ + LF +P +V W
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I G A + + F MI + P+E TF VL AC + +
Sbjct: 80 NKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKII 139
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+G ++DL + G D A +L+ E F D W +M+ + N + +
Sbjct: 140 HHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFLKDSVSWVAMISGL-SQNGREDEA 197
Query: 612 IIAEQLLATSPEDPSKYVMLS 632
I+ + S P+ YV S
Sbjct: 198 ILLFCQMHKSAVIPTPYVFSS 218
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/759 (31%), Positives = 366/759 (48%), Gaps = 110/759 (14%)
Query: 9 ALRHCGQRRSIKQGK---SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
ALR C R S+K +H + I GL +D GN L+ +YA + A ++F++++
Sbjct: 47 ALREC--RGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLS 104
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ VSW M++ Y N A+ LY H + V P ++ S+VL AC+ + + GR
Sbjct: 105 ARDNVSWVAMLSGYARNGLGEEAVGLY-HQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY------------SNWAASA 171
L+H ++ ++ +TV+ N L+ +Y++ GSL+ ++F + S A
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223
Query: 172 YGNVAL----------WN-------SMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
G AL W S+L+ GKQ+H++ +K G + +
Sbjct: 224 NGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEG 283
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFECSCFTLSA---- 252
SL+D+Y+KCG I + L +F +VV W ++V F+ C ++A
Sbjct: 284 SLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRP 343
Query: 253 ------------------------------------------LVDMYSNCNVLCEARKLF 270
L+DMYS L +AR++
Sbjct: 344 NEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL 403
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ + +V W SMI+GYV +E +EA+ + G+ D+ SA+ AC
Sbjct: 404 EVLEA------KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACA 457
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+ R Q+H + SGY D + + L++LYAR G K A LF + KD + W
Sbjct: 458 GIKAM--RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITW 515
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+G++ G + GL A +F M + N F S + + LA +++GKQ+HA +K
Sbjct: 516 NGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIK 575
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G E +LI +Y KCG I+D F M ER+ VSW II C Q+G EA+
Sbjct: 576 TGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDL 635
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F +M Q LKPN++TF+GVL+AC H GLVEE F SM E+G+ P +HY C+VD+LG
Sbjct: 636 FDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILG 695
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG D A + + EMP + +W ++L AC H N ++ + A+ LL P D + YV+
Sbjct: 696 RAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVL 755
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
LSN YA G W VRK K G K+ G SWIEV +
Sbjct: 756 LSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKN 794
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 221/502 (44%), Gaps = 23/502 (4%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L C + +GK LH ++K G+S D +LL +Y + +A ++F
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
R N+V W M+ AY + L+ M+ G V PN F Y +L+ C+ +G++
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAG-VRPNEFTYPCLLRTCTYAGEI 361
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+LG IH + E D + L+DMY K G L R++ + +V W
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA------KDVVSWT 415
Query: 180 SMLSGGKQVHAFCVKRGFEK-EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
SM++G Q H FC K E +D+ L + + A M + + + +
Sbjct: 416 SMIAGYVQ-HEFC-KEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIH-SRV 472
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
V + +ALV++Y+ C EA LF+ A + + WN M+SG+ +
Sbjct: 473 YVSGYSADVSIWNALVNLYARCGRSKEAFSLFE------AIEHKDKITWNGMVSGFAQSG 526
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EEA+ + ++ +G+ + +TF S++ A NL + Q+H ++ +G + V
Sbjct: 527 LYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQ--GKQIHATVIKTGCTSETEV 584
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LI LY + G+++ A F + +++ V+W+ +I C++HG A LF M
Sbjct: 585 ANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGL 644
Query: 419 DVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N VL CS + + G + + G ++D+ + G++D
Sbjct: 645 KPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRAR 704
Query: 478 ALFKFMP-ERDVVSWTGIIVGC 498
+ MP + + W ++ C
Sbjct: 705 KFVEEMPVSANAMVWRTLLSAC 726
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 6/290 (2%)
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N ++G++ +E E+ ++L + + S F AL+ C + + +H
Sbjct: 10 NKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPV-IHAKA 68
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+T G D I G+ LIDLYA+ G V+ A +F +L +D V+W ++ G ++GL A
Sbjct: 69 ITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAV 128
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L+ M S +++SSVL C+ A +G+ VHA K+G E + +LI +Y
Sbjct: 129 GLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALY 188
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
L+ G + +F MP D V++ +I Q G + A+ F+EM S P+ +T
Sbjct: 189 LRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIA 248
Query: 528 GVLSACRHAGLVEE-----AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+L+AC G + + ++ + M P+Y +E L Y ++ +A
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/767 (30%), Positives = 372/767 (48%), Gaps = 127/767 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ G +H +++ G+ F G+ LL +Y + DA ++FD+M+ +N+
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SWT ++ Y I+L+ M+ G V P+ F++ V KACS + +G+ +++
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ E ++ + ++LDM++KCG + R+ F++ + +V +WN M+SG
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE------FKDVFMWNIMVSGYTS 268
Query: 188 VHAF-----CVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALF-------NFMPERD 231
F C+ G + + VT ++I Y + G+ ++ F +F P +
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKP--N 326
Query: 232 VVSWTGIIVGC------FEC------------------------SCFTLS---------- 251
VVSWT +I G FE +C LS
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386
Query: 252 ----------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+LVD Y+ C + AR+ F ++ WN+M++GY
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ------TDLVSWNAMLAGYA 440
Query: 296 LNEQNEEAITLLSH-----------------------------------IHSSGMCIDSY 320
L +EEAI LLS +HS GM ++
Sbjct: 441 LRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTT 500
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T + AL AC + N + ++HG ++ + EL VGS LI +Y+ +++ A +F
Sbjct: 501 TISGALAACGQVRNL--KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
L +DVV W+ +I C + G + A L R+M SN +VN + S L CS LA+LR+
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK++H F ++ G + + L SLIDMY +CG I +F MP+RD+VSW +I G
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G +A+ FQ LKPN ITF +LSAC H+GL+EE W F MK EY ++P +E
Sbjct: 679 HGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
Y CMVDLL +AG F++ + I +MPF+P+ +W S+L AC H N L A L
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFEL 798
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
P+ YV+++N+Y+ G W+ +K+R K+ G K G SWIEV
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
CI+ Y S L+ C L +N R QVH +V +G ++ +GS L+++Y + G V+ A
Sbjct: 88 CIEIYA--SILQKCRKL--YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F ++ +++V +W+ ++ G LF M+N + F+ V K CS L
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+ R GK V+ + + GFE S++DM++KCG +D F+ + +DV W ++
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G K+A+ +M S +KP+++T+ ++S +G EEA F M
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF---KPDKTIWASMLKAC 601
+P++ + ++ Q G +A + +M KP+ AS + AC
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL CGQ R++K GK +H +++ + G+ L+SMY+ SL A +F E++
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V W ++++A + R A+ L M +VE N + L ACS L G+
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGK 620
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH+ I R L+ ++N+L+DMY +CGS+ +R++FD ++ WN M+S
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR------DLVSWNVMIS 674
Query: 184 -------GGKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G V+ F R G + +T T+L+ G I++G F M
Sbjct: 675 VYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G+ + A +L M +N D I +S+L+ C L +LR G QVHA V G + +
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII-VGCGQNGRAKEAIAYFQEMIQS 517
+ L+++Y + G ++D +F M ER+V SWT I+ + CG G +E I F M+
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGL-GDYEETIKLFYLMVNE 184
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC----MVDLLGQAG 573
++P+ F V AC ++ +Y L E C ++D+ + G
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVY-----DYMLSIGFEGNSCVKGSILDMFIKCG 239
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNN-TKLVSIIAEQLLATSPEDPSKYVMLS 632
D A + E+ FK D +W M+ + K + I++ L+ D + +
Sbjct: 240 RMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 633 NVYATLGMWDSLSK 646
+ YA G ++ SK
Sbjct: 299 SGYAQSGQFEEASK 312
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 17/243 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL C + +++QGK +H II+ GL F N+L+ MY S+ + ++FD M
Sbjct: 603 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
++++VSW M++ Y + A+ L+ G ++PN ++ +L ACS SG ++ G
Sbjct: 663 QRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG-LKPNHITFTNLLSACSHSGLIEEGW 721
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLS 183
+ T ++ ++D+ + G L F + + N A+W S+L
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP----NAAVWGSLL- 776
Query: 184 GGKQVHA------FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVS 234
G ++H + + FE E + + + ++Y G +D + M ER V
Sbjct: 777 GACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 836
Query: 235 WTG 237
G
Sbjct: 837 PPG 839
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/667 (30%), Positives = 353/667 (52%), Gaps = 38/667 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + KS+H R++ G D++ GN L+ MY F L+ A K+F+EM +++VSW
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++++ Y +N N A+ +Y G V P+ + S+VL+AC G ++ G +IH I
Sbjct: 185 NSLISGYNANGYWNEALEIYYRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIE 243
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
+ ++ D ++ N LL MY K L R++FD+ + WN+M+ G QV
Sbjct: 244 KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM------VLRDAVSWNTMICGYSQVGL 297
Query: 191 F--CVK------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
+ +K F+ + +T+TS++ G+++ G + ++M I
Sbjct: 298 YEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM-----------ITSG 346
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+EC + L++MY+ C L ++++F + + WNSMI+ Y+ N +E
Sbjct: 347 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS------WNSMINVYIQNGSFDE 400
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + + + DS T+ L L + + ++H + G+ + +V + L
Sbjct: 401 AMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLH--LGKELHCDLAKMGFNSNIVVSNTL 457
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YA+ G + +L++F + +D++ W+ +I C +L + M +
Sbjct: 458 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 517
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L VCS LA+ R+GK++H K G E + LI+MY KCG + + +FK
Sbjct: 518 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 577
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M +DVV+WT +I CG G K+A+ F EM + + P+ + F+ ++ AC H+GLVEE
Sbjct: 578 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG 637
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK +Y +EP +EHY C+VDLL ++ D AE I MP KPD +IW ++L AC
Sbjct: 638 LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACR 697
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
+T++ ++E+++ +P+D YV++SN+YA LG WD + +RK+ K G KK G
Sbjct: 698 MSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGC 757
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 758 SWMEIQN 764
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 232/568 (40%), Gaps = 107/568 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR CG S+++G +H I K G+ +D+ N LLSMY F L D ++FD+M ++
Sbjct: 222 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 281
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW TM+ Y+ +I+L+ M+ +P+ +++L+AC GDL+ G+ +H
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEMVN--QFKPDLLTITSILQACGHLGDLEFGKYVH 339
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM------- 181
+ + E DT N L++MY KCG+L L Q +V+ WNSM
Sbjct: 340 DYMITSGYECDTTASNILINMYAKCGNL---LASQEVFSGMKCKDSVS-WNSMINVYIQN 395
Query: 182 ------------------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
L GK++H K GF V
Sbjct: 396 GSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSN 455
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+L+DMY KCGE+ D L +F M RD+++W II C +CN+
Sbjct: 456 TLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS------------EDCNL--- 500
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ ++S + + G+ D T S
Sbjct: 501 -------------------------------------GLRMISRMRTEGVTPDMATMLSI 523
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L C L R ++HG I G E D VG+ LI++Y++ G+++++ ++F + K
Sbjct: 524 LPVCSLLA--AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 581
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQV 444
DVV W+ LI C +G A F +M + + +++ CS + G
Sbjct: 582 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 641
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGR 503
H E ++D+ + +D MP + D W ++ C +G
Sbjct: 642 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGD 701
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ A + +I+ L P++ + ++S
Sbjct: 702 TEIAERVSERIIE--LNPDDTGYYVLVS 727
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 174/362 (48%), Gaps = 5/362 (1%)
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
AS NV LWNS+I N EA++L S + D+YTF S + AC LL+F
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF-- 131
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
A +H ++ G+ D +G+ LID+Y R ++ A ++F +P +DVV+W+ LI G
Sbjct: 132 EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 191
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+G + A ++ N + + +SSVL+ C L S+ G +H K G +K+
Sbjct: 192 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 251
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
I L+ MY K + DG +F M RD VSW +I G Q G +E+I F EM+ +
Sbjct: 252 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-N 310
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ KP+ +T +L AC H G +E + M G E ++++ + G
Sbjct: 311 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLA 369
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
++++ + M K D W SM+ + + + + + D YVML ++
Sbjct: 370 SQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQ 428
Query: 638 LG 639
LG
Sbjct: 429 LG 430
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 189/506 (37%), Gaps = 117/506 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I L+ CG ++ GK +H +I G D N L++MYA +L + ++F
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K+ VSW +M+ Y N + A++L+ M V+P+ Y +L + GDL
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM--KTDVKPDSVTYVMLLSMSTQLGDL 432
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
LG+ +H + + + V+ NTL+DMY KCG + L + N A ++ WN++
Sbjct: 433 HLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL-KVFENMKAR---DIITWNTI 488
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
++ GK++H K G
Sbjct: 489 IASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL 548
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E + LI+MY KCG + + +F M +DVV+WT +I C
Sbjct: 549 ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC--------------- 593
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
YG + ++A+ + ++G+
Sbjct: 594 ---------------------GMYG----------------EGKKAVRAFGEMEAAGIVP 616
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGN 371
D F + + AC S L GL + DY + + +DL +R
Sbjct: 617 DHVAFVAIIFAC-------SHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSAL 669
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A + +P K D W L+ C G +A + +I N D + + V
Sbjct: 670 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYV-LVSN 728
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKE 456
+ + L + + + RG +K+
Sbjct: 729 IYAALGKWDQVRSIRKSIKARGLKKD 754
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGCTK 399
++H LI+T G I + LI YA + S+ +F RL P +V W+ +I T
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRALTH 92
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+GL S A L+ + + + SV+ C+ L K +H + GF +
Sbjct: 93 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LIDMY + ++D +F+ MP RDVVSW +I G NG EA+ + +
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIF-----TSMKPEYGLEPHLEHYYCMVDLL----- 569
P+ T VL AC G VEE I +K + + L YC + L
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272
Query: 570 --------------------GQAGCFDDAEQLIAEM--PFKPDKTIWASMLKACETHNNT 607
Q G ++++ +L EM FKPD S+L+AC +
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 332
Query: 608 KLVSIIAEQLLATSPE-DPSKYVMLSNVYATLG 639
+ + + ++ + E D + +L N+YA G
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCG 365
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/729 (30%), Positives = 353/729 (48%), Gaps = 122/729 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ HC + R + GK +H ++ + G+ DI+ GN+L++ Y+ F + A ++F M +++
Sbjct: 63 IEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDV 122
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W++M+ AY N P A + M + ++EPN + ++LKAC+ L+ GR IH
Sbjct: 123 VTWSSMIAAYAGNNHPAKAFDTFERMTD-ANIEPNRITFLSILKACNNYSILEKGRKIHT 181
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT---------------------------RKL-- 160
+ +E D + L+ MY KCG ++ RKL
Sbjct: 182 IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241
Query: 161 -FDQYSNW-----AASAYGNVALWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
F+ Y + +A V+L NS L+ G+++H+ +RG E + + +LI
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KC + + +F+ M +RDV+SW+ +I G Y+
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAG---------------YAQ---------- 336
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
SGY E +E LL + G+ + TF S L+AC
Sbjct: 337 ----------------------SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
Q+H + G+ELD + + + ++YA+ G++ A ++F ++ K+VVA
Sbjct: 375 TAHGALEQ--GRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVA 432
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMIN--------------SNQDV--------------- 420
W+ + K G S A +F +M N D+
Sbjct: 433 WTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF 492
Query: 421 --NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ + ++L+ C LA L RGK VHA VK G E + + TSLI MY KCG++ +
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M RD V+W ++ G GQ+G EA+ F+ M++ R+ PNEIT V+SAC AGL
Sbjct: 553 VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGL 612
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E IF M+ ++ + P +HY CMVDLLG+AG +AE+ I MP +PD ++W ++L
Sbjct: 613 VQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC++HNN +L A +L P S Y+ LSN+YA G WD +KVR+ G KK
Sbjct: 673 GACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732
Query: 659 -AGMSWIEV 666
G S IE+
Sbjct: 733 DRGESSIEI 741
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 194/469 (41%), Gaps = 115/469 (24%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C ++ +G+ +H I + GL D+ N L++MY S+ +A ++FD M++
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK 321
Query: 67 KNIVSWTTMVTAYTSN-----KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++++SW+ M+ Y + + + +L M G V PN + ++L+AC+ G L
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREG-VFPNKVTFMSILRACTAHGAL 380
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ GR IH +++ E D L + +MY KCGS+ ++F + +N NV W
Sbjct: 381 EQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMAN------KNVVAWT 434
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW---- 235
S LS MY+KCG++ +F+ MP R+VVSW
Sbjct: 435 SFLS--------------------------MYIKCGDLSSAEKVFSEMPTRNVVSWNLMI 468
Query: 236 -----TGIIVGCFEC---------------------SCFTL------------------- 250
G IV FE +C L
Sbjct: 469 AGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE 528
Query: 251 ------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
++L+ MYS C + EAR +FD+ S+ A WN+M++GY + EA+
Sbjct: 529 SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA------WNAMLAGYGQHGDGLEAV 582
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN--- 361
L + + + T T+ + AC SR L G + + D+ +
Sbjct: 583 DLFKRMLKERVSPNEITLTAVISAC-------SRAGLVQEGREIFRMMQEDFKMTPRKQH 635
Query: 362 ---LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
++DL R G ++ A E +P + D+ W L+ C H LA
Sbjct: 636 YGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLA 684
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 153/297 (51%), Gaps = 4/297 (1%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EAI LL I G+ ++S T+ ++ C F VH + G E+D +G++
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFED--GKMVHKQLDELGVEIDIYLGNS 96
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LI+ Y++ +V SA ++F R+ +DVV WS +I + + A+ F M ++N + N
Sbjct: 97 LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ S+LK C+ + L +G+++H G E + T+LI MY KCGEI +F
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M ER+VVSWT II Q+ + EA +++M+Q+ + PN +TF+ +L++C +
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + E GLE + ++ + + +A ++ M K D W++M+
Sbjct: 277 GRRIHSHI-SERGLETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMI 331
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L CG +++GK +H +K GL D +L+ MY+ + +A +F
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVF 554
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M+ ++ V+W M+ Y + A+ L+ ML+ V PN +AV+ ACS +G +
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKE-RVSPNEITLTAVISACSRAGLV 613
Query: 122 DLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWN 179
GR I + + K+ ++D+ + G L + F Q + ++++W+
Sbjct: 614 QEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQ----SMPCEPDISVWH 669
Query: 180 SMLSGGK-----QVHAFCVKRGFEKEDVTLT---SLIDMYLKCGEIDDGLALFNFMPER 230
++L K Q+ E E + +L ++Y + G DD + M +R
Sbjct: 670 ALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR 728
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 352/667 (52%), Gaps = 38/667 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + KS+H R++ G D++ GN L+ MY F L+ A K+F+EM +++VSW
Sbjct: 184 CAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 243
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++++ Y +N N A+ +Y G V P+ + S+VL+AC G ++ G +IH I
Sbjct: 244 NSLISGYNANGYWNEALEIYYRFRNLGVV-PDSYTMSSVLRACGGLGSVEEGDIIHGLIE 302
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
+ ++ D ++ N LL MY K L R++FD+ + WN+M+ G QV
Sbjct: 303 KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM------VLRDAVSWNTMICGYSQVGL 356
Query: 191 F--CVK------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
+ +K F+ + +T+TS++ G+++ G + ++M I
Sbjct: 357 YEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM-----------ITSG 405
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+EC + L++MY+ C L ++++F + + WNSMI+ Y+ N +E
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVF------SGMKCKDSVSWNSMINVYIQNGSFDE 459
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + + + DS T+ L L + ++H + G+ + +V + L
Sbjct: 460 AMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLX--LGKELHCDLAKMGFNSNIVVSNTL 516
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YA+ G + +L++F + +D++ W+ +I C +L + M +
Sbjct: 517 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 576
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L VCS LA+ R+GK++H K G E + LI+MY KCG + + +FK
Sbjct: 577 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 636
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M +DVV+WT +I CG G K+A+ F EM + + P+ + F+ ++ AC H+GLVEE
Sbjct: 637 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG 696
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK +Y +EP +EHY C+VDLL ++ D AE I MP KPD +IW ++L AC
Sbjct: 697 LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACR 756
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
+T++ ++E+++ +P+D YV++SNVYA LG WD + +RK+ K G KK G
Sbjct: 757 MSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGC 816
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 817 SWMEIQN 823
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 232/567 (40%), Gaps = 107/567 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG S+++G +H I K G+ +D+ N LLSMY F L D ++FD+M ++
Sbjct: 282 LRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 341
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW TM+ Y+ +I+L+ M+ +P+ +++L+AC GDL+ G+ +H+
Sbjct: 342 VSWNTMICGYSQVGLYEESIKLFMEMVN--QFKPDLLTITSILQACGHLGDLEFGKYVHD 399
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM-------- 181
+ E DT N L++MY KCG+L L Q +V+ WNSM
Sbjct: 400 YMITSGYECDTTASNILINMYAKCGNL---LASQEVFSGMKCKDSVS-WNSMINVYIQNG 455
Query: 182 -----------------------------------LSGGKQVHAFCVKRGFEKEDVTLTS 206
L GK++H K GF V +
Sbjct: 456 SFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNT 515
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+DMY KCGE+ D L +F M RD+++W II C +CN+
Sbjct: 516 LVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS------------EDCNL---- 559
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ ++S + + G+ D T S L
Sbjct: 560 ------------------------------------GLRMISRMRTEGVTPDMATMLSIL 583
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
C L R ++HG I G E D VG+ LI++Y++ G+++++ ++F + KD
Sbjct: 584 PVCSLLA--AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD 641
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVH 445
VV W+ LI C +G A F +M + + +++ CS + G H
Sbjct: 642 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 701
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRA 504
E ++D+ + +D MP + D W ++ C +G
Sbjct: 702 RMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDT 761
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ A + +I+ L P++ + ++S
Sbjct: 762 EIAQRVSERIIE--LNPDDTGYYVLVS 786
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 173/362 (47%), Gaps = 5/362 (1%)
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
AS NV WNS+I N EA++L S + D+YTF S + AC LL+F
Sbjct: 133 ASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF-- 190
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
A +H ++ G+ D +G+ LID+Y R ++ A ++F +P +DVV+W+ LI G
Sbjct: 191 EMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 250
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+G + A ++ N + + +SSVL+ C L S+ G +H K G +K+
Sbjct: 251 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 310
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
I L+ MY K + DG +F M RD VSW +I G Q G +E+I F EM+ +
Sbjct: 311 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-N 369
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ KP+ +T +L AC H G +E + M G E ++++ + G
Sbjct: 370 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLA 428
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
++++ + M K D W SM+ + + + + + D YVML ++
Sbjct: 429 SQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQ 487
Query: 638 LG 639
LG
Sbjct: 488 LG 489
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 189/506 (37%), Gaps = 117/506 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I L+ CG ++ GK +H +I G D N L++MYA +L + ++F
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K+ VSW +M+ Y N + A++L+ M V+P+ Y +L + GDL
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT--DVKPDSVTYVMLLSMSTQLGDL 491
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
LG+ +H + + + V+ NTL+DMY KCG + L + N A ++ WN++
Sbjct: 492 XLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL-KVFENMKAR---DIITWNTI 547
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
++ GK++H K G
Sbjct: 548 IASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL 607
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E + LI+MY KCG + + +F M +DVV+WT +I C
Sbjct: 608 ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC--------------- 652
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
YG + ++A+ + ++G+
Sbjct: 653 ---------------------GMYG----------------EGKKAVRAFGEMEAAGIVP 675
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGN 371
D F + + AC S L GL + DY + + +DL +R
Sbjct: 676 DHVAFVAIIFAC-------SHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSAL 728
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A + +P K D W L+ C G +A + +I N D + + V
Sbjct: 729 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYV-LVSN 787
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKE 456
V + L + + + RG +K+
Sbjct: 788 VYAALGKWDQVRSIRKSIKARGLKKD 813
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGCTK 399
++H LI+T G I + LI YA + S+ +F RL P +V W+ +I T
Sbjct: 93 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYXWNSIIRALTH 151
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+GL S A L+ + + + SV+ C+ L K +H + GF +
Sbjct: 152 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYI 211
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LIDMY + ++D +F+ MP RDVVSW +I G NG EA+ + +
Sbjct: 212 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIF-----TSMKPEYGLEPHLEHYYCMVDLL----- 569
P+ T VL AC G VEE I +K + + L YC + L
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331
Query: 570 --------------------GQAGCFDDAEQLIAEM--PFKPDKTIWASMLKACETHNNT 607
Q G ++++ +L EM FKPD S+L+AC +
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 391
Query: 608 KLVSIIAEQLLATSPE-DPSKYVMLSNVYATLG 639
+ + + ++ + E D + +L N+YA G
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCG 424
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 319/648 (49%), Gaps = 125/648 (19%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R N V W + Y N N A+RLY M G + P+ ++ +V+KA
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKA----------- 129
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
CGS S L G
Sbjct: 130 ---------------------------CGS-----------------------QSDLQAG 139
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII------ 239
++VH + RGFE + + T+L MY KCG +++ +F+ MP+RDVVSW II
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 240 -------------------------------------------VGCF------ECSCFTL 250
+ C+ E +
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ LV+MY+ C + A KLF++ +VA WN++I GY LN Q+ EA+ + +
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMP------IRDVASWNAIIGGYSLNSQHHEALAFFNRM 313
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ +S T S L AC +L F Q+HG + SG+E + +VG+ L+++YA+ G
Sbjct: 314 QVRGIKPNSITMVSVLPACAHL--FALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG 371
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
NV SA +LF R+PKK+VVAW+ +I G ++HG A LF +M + F I SVL
Sbjct: 372 NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLP 431
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ +L +GKQ+H + ++ GFE + T L+D+Y KCG ++ LF+ MPE+DVVS
Sbjct: 432 ACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS 491
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
WT +I+ G +G ++A+A F +M ++ K + I F +L+AC HAGLV++ F MK
Sbjct: 492 WTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMK 551
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+YGL P LEHY C+VDLLG+AG D+A +I M +PD +W ++L AC H N +L
Sbjct: 552 SDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELG 611
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
A+ L P++ YV+LSN+YA W+ ++K+RK K+ G KK
Sbjct: 612 EQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKK 659
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 242/532 (45%), Gaps = 99/532 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG + ++ G+ +H II G D+ G L SMY SL +A ++FD M ++++
Sbjct: 127 IKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDV 186
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ Y+ N +P A+ L++ M + ++PN +V+ C+ L+ G+ IH
Sbjct: 187 VSWNAIIAGYSQNGQPYEALALFSEM-QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ-----YSNWAASAYG--------- 173
R +E D +++N L++MY KCG++ KLF++ ++W A G
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305
Query: 174 NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+A +N M L G+Q+H + ++ GFE DV +L++
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG ++ LF MP+++VV+W II G
Sbjct: 366 MYAKCGNVNSAYKLFERMPKKNVVAWNAIISG---------------------------- 397
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Y + EA+ L + + G+ DS+ S L AC
Sbjct: 398 ------------------------YSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPAC 433
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ L Q+HG + SG+E + +VG+ L+D+YA+ GNV +A +LF R+P++DVV+
Sbjct: 434 AHFLALEQ--GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS 491
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I+ HG A LF M + ++ +++L CS + +G Q C+
Sbjct: 492 WTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQ-CM 550
Query: 450 KR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
K G + L+D+ + G +D+ + K M E D W ++ C
Sbjct: 551 KSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 186/448 (41%), Gaps = 119/448 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C +++QGK +HC I+ G+ D+ N L++MYA ++N AHKLF+ M
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++ SW ++ Y+ N + + A+ +N M G ++PN +VL AC+ L+ G+
Sbjct: 284 IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-IKPNSITMVSVLPACAHLFALEQGQ 342
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
IH R E + V+ N L++MY KCG++ KLF++ NV WN+++S
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK------KNVVAWNAIIS 396
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G GKQ+H + ++ GFE
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
V T L+D+Y KCG ++ LF MPE+DVVSWT +I+
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL------------------- 497
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
AYG ++ E+A+ L S + +G +D
Sbjct: 498 --------------------AYG-------------IHGHGEDALALFSKMQETGTKLDH 524
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVK 373
FT+ L AC S L GL + DY + L+DL R G++
Sbjct: 525 IAFTAILTAC-------SHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLD 577
Query: 374 SALELFHRLP-KKDVVAWSGLIMGCTKH 400
A + + + D W L+ C H
Sbjct: 578 EANGIIKNMSLEPDANVWGALLGACRIH 605
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/671 (32%), Positives = 342/671 (50%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + QG+ +H + K+G +IF GN ++++Y S A ++F +M ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T+++ + A+ ++ M ++ + P+ S++L AC+ GDL G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ + + D ++ +LLD+YVKCG + L + +S NV LWN ML Q++
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVI----FNSSDRTNVVLWNLMLVAFGQIN 324
Query: 190 A-------FCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
FC + G T ++ EID G + + + TG
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK------TG--- 375
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
FE + L+DMYS L +AR++ + +V W SMI+GYV +E
Sbjct: 376 --FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE------KDVVSWTSMIAGYVQHECC 427
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ + G+ D+ SA+ C IN + R LQ+H I SGY D +
Sbjct: 428 KDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM----RQGLQIHARIYVSGYSGDVSI 483
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L++LYAR G ++ A F + KD + +GL+ G + GL+ A +F M S
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N F S L + LA +++GKQ+HA +K G E +LI +Y KCG +D
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F M ER+ VSW II C Q+GR EA+ F +M + +KPN++TF+GVL+AC H GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE + F SM EYG+ P +HY C++D+ G+AG D A++ I EMP D +W ++L
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC+ H N ++ A+ LL P D + YV+LSN YA W + +VRK + G K
Sbjct: 724 SACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRK 783
Query: 658 KAGMSWIEVSS 668
+ G SWIEV +
Sbjct: 784 EPGRSWIEVKN 794
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 216/505 (42%), Gaps = 37/505 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +++G LH + K G+S D +LL +Y + A +F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R N+V W M+ A+ + L+ M G + PN F Y +L+ C+ + ++DLG
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDLGE 365
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH + E D + L+DMY K G L R++ + +V W SM++
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE------KDVVSWTSMIA 419
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP--------ERDVVSW 235
G Q H C L + +M KCG D + L + + + +
Sbjct: 420 GYVQ-HECCKD--------ALAAFKEMQ-KCGIWPDNIGLASAISGCAGINAMRQGLQIH 469
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
I V + +ALV++Y+ C + EA +SS+ + N ++SG+
Sbjct: 470 ARIYVSGYSGDVSIWNALVNLYARCGRIREA------FSSFEEMELKDGITGNGLVSGFA 523
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ +EEA+ + + SG+ + +TF SAL A NL Q+H ++ +G+ +
Sbjct: 524 QSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQ--GKQIHARVIKTGHSFE 581
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VG+ LI LY + G+ + A F + +++ V+W+ +I C++HG A LF M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKK 641
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N VL CS + + G + + G +ID++ + G++D
Sbjct: 642 EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLD 701
Query: 475 DGLALFKFMP-ERDVVSWTGIIVGC 498
+ MP D + W ++ C
Sbjct: 702 RAKKFIEEMPIAADAMVWRTLLSAC 726
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLI 347
++G++ +E + ++L + + F AL+AC N R ++H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG----NGRRWQVVPEIHAKA 68
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
VT G IVG+ LIDLY++ G V A +F L +D V+W ++ G ++GL A
Sbjct: 69 VTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L+R M + +++SSVL C+ +G+ +HA K GF E ++I +Y
Sbjct: 129 GLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLY 188
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
L+CG +F MP RD V++ +I G Q G + A+ F+EM S L P+ +T
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 528 GVLSACRHAGLVEEA 542
+L+AC G +++
Sbjct: 249 SLLAACASLGDLQKG 263
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL IKQGK +H R+IK G S + GN L+S+Y S DA F EM+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW T++T+ + + R A+ L++ M + G ++PN + VL ACS G ++ G
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLS 183
+ ++ E + ++D++ + G L R K F + AA A +W ++LS
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM----VWRTLLS 724
Query: 184 GGK-----QVHAFCVKRGFEKE 200
K +V F K E E
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELE 746
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK---QVHAFCVKRGFEKEDITLTSLID 465
LF D + + + L+ C + RR + ++HA V RG K I LID
Sbjct: 28 LFADKARQHGGLGPLDFACALRACR--GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+Y K G + +F+ + RD VSW ++ G QNG +EA+ +++M ++ + P
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA--------GCFDD 577
VLS+C A L + I +H +C +G A G F
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQ---------GYKHGFCSEIFVGNAVITLYLRCGSFRL 196
Query: 578 AEQLIAEMPFK 588
AE++ +MP +
Sbjct: 197 AERVFCDMPHR 207
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/703 (31%), Positives = 366/703 (52%), Gaps = 67/703 (9%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR CG RS GK +H ++I G D F GN L+ MYA K+FDEM +N
Sbjct: 282 ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN 341
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+W ++++A N A+ L+ M E G + N F ++L A + D+ GR +H
Sbjct: 342 QVTWNSIISAEAQFGHFNDALVLFLRMQESG-YKSNRFNLGSILMASAGLADIGKGRELH 400
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ- 187
+ R L D +L + L+DMY KCG + + + + + N +N++L+G Q
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVE----EAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
H + G + + T T+L+ + + G + + ++ I
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK--NI 514
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
IV + LV MYS C L A+++F++ A N WNSMI GY N
Sbjct: 515 IVE---------TELVHMYSECGRLNYAKEIFNRM------AERNAYSWNSMIEGYQQNG 559
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ +EA+ L + +G+ D ++ +S L +C++L +S+ ++H IV + E + I+
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL--SDSQKGRELHNFIVRNTMEEEGIL 617
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVA----------------------------- 389
L+D+YA+ G++ A +++ + KKDV+
Sbjct: 618 QVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNT 677
Query: 390 --WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
W+ ++ G GL ++ F +M+ S+ + + + +++ +CS L +L G Q+H+
Sbjct: 678 ALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSL 737
Query: 448 CVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K+GF + L T+L+DMY KCG I +F M +++VSW +I G ++G +KE
Sbjct: 738 IIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKE 797
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ ++EM + + PNE+TFL +LSAC H GLVEE IFTSM+ +Y +E EHY CMV
Sbjct: 798 ALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMV 857
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AG +DA++ + +MP +P+ + W ++L AC H + + + A++L P++P
Sbjct: 858 DLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPG 917
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
YV++SN+YA G W + +R+ K G KK G+SWIE++S
Sbjct: 918 PYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINS 960
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 172/732 (23%), Positives = 309/732 (42%), Gaps = 128/732 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
++ C S ++GKS+H ++I G + D + +L +YA L+D A KLF+EM
Sbjct: 78 IQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPE 137
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+ +W TM+ AY +RLY M G+ + F + +V+KAC D+ R
Sbjct: 138 RNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS-DKFTFPSVIKACIAMEDMGGVRQ 196
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCG-------SLTRKLFDQYSNWAASAYGNV---- 175
+ + + L + + L+D Y + G SL W A G V
Sbjct: 197 LQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILS 256
Query: 176 -----ALWNSML------------------------SGGKQVHAFCVKRGFEKEDVTLTS 206
+++ ML GGKQVH+ + GF+ + +
Sbjct: 257 WEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 316
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------CFECS 246
LIDMY KC + + L +F+ M ER+ V+W II ++ +
Sbjct: 317 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376
Query: 247 CFTLSALVDMYSNCNVLCEARK-------------------LFDQYSS----------WA 277
F L +++ + + + R+ L D YS +
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS-GMCIDSYTFTSALKACINLLNFN 336
+ N +N++++GYV + EEA+ L + S G+ D +TFT+ L C N N N
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
Q+H ++ + + IV + L+ +Y+ G + A E+F+R+ +++ +W+ +I G
Sbjct: 497 Q--GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEG 554
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++G A LF+ M + + F +SS+L C L+ ++G+++H F V+ E+E
Sbjct: 555 YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE 614
Query: 457 DITLTSLIDMYLKCGEID-------------------------------DGLALFKFMPE 485
I L+DMY KCG +D D LF M +
Sbjct: 615 GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQ 674
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+ W I+ G G KE+ +F EM++S ++ + +T + +++ C +E +
Sbjct: 675 RNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQL 734
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + + + + +VD+ + G A + M K + W +M+ H
Sbjct: 735 HSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG 793
Query: 606 NTKLVSIIAEQL 617
+K I+ E++
Sbjct: 794 CSKEALILYEEM 805
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/587 (25%), Positives = 265/587 (45%), Gaps = 62/587 (10%)
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-----TR 158
N YS++++ C S G+ IH ++ D LM +L +Y + G L R
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
KLF++ N+ WN+M+ +V + + D + I
Sbjct: 130 KLFEEMPER------NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+A+ + R + S ++ C+ F ALVD Y+ + +A D+ +
Sbjct: 184 ACIAMEDMGGVRQLQS--SVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTS- 240
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
V WN++I+GYV EEA + + G+C D++TF SAL+ C L + +
Sbjct: 241 -----VVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG- 294
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
QVH ++ G++ D VG+ LID+YA+ + +S L++F + +++ V W+ +I
Sbjct: 295 -GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ G + A +LF M S N+F + S+L + LA + +G+++H V+ + I
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM-IQS 517
++L+DMY KCG +++ +F+ + ER+ VS+ ++ G Q G+A+EA+ + +M +
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSED 473
Query: 518 RLKPNEITFLGVLSAC-----RHAGLVEEAWTIFTSMKPEYGLEPHLEHYY--------- 563
++P++ TF +L+ C + G A I ++ +E L H Y
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533
Query: 564 ----------------CMVDLLGQAGCFDDAEQLIAEMPF---KPDKTIWASMLKAC--- 601
M++ Q G +A +L +M KPD +SML +C
Sbjct: 534 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 593
Query: 602 -ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
++ +L + I T E+ V+L ++YA G D KV
Sbjct: 594 SDSQKGRELHNFIVRN---TMEEEGILQVVLVDMYAKCGSMDYAWKV 637
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKL 60
D+ +V + C +++ G LH IIK G + L+ MY+ ++ A +
Sbjct: 711 DVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTV 770
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M KNIVSW M++ Y+ + A+ LY M + G + PN + A+L ACS +G
Sbjct: 771 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKG-MYPNEVTFLAILSACSHTGL 829
Query: 121 LDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL 156
++ G I + + +E ++D+ + G L
Sbjct: 830 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRL 866
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD--- 475
DVN SS+++ C S +RGK +H + G+ + +T ++ +Y + G +DD
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
LF+ MPER++ +W +I+ + E + + M S ++ TF V+ AC
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/765 (30%), Positives = 374/765 (48%), Gaps = 106/765 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHK 59
++ R+I L + Q I K +H +I+ +G + DIF N LL Y+ +N A+K
Sbjct: 36 IEQRKIGRELANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANK 95
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LFD M+ KN+V+W++MV+ YT + A+ L+ + + +PN ++ ++V++AC+ G
Sbjct: 96 LFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFG 155
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG------------------------- 154
L+ IH + + D + +L+D Y K
Sbjct: 156 GLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIA 215
Query: 155 --------SLTRKLFDQYS-------NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
++ KLFDQ + S+ + L L GGKQ+H + ++ G
Sbjct: 216 GYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVM 275
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC----------------- 242
+ + ID Y KC ++ G LF+ M +++VVSWT +I GC
Sbjct: 276 DVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMA 335
Query: 243 --------FEC-----SC-------------------------FTLSALVDMYSNCNVLC 264
F C SC F + L+DMY+ C+ L
Sbjct: 336 RMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLT 395
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ARK+F+ ++ +Y N+MI GY ++ EA+ L + S F S
Sbjct: 396 DARKVFNLMAAIDLVSY------NAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L +L ++ + Q+HGLI+ G LD GS LID+Y++ V A +F +
Sbjct: 450 LLGVSASL--YHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQD 507
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KD+V W+ + G T+ N + L++ + S N+F ++V+ S +ASLR G+Q
Sbjct: 508 KDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQF 567
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H +K GF+ + +L+DMY K G I++ F +D W +I Q+G A
Sbjct: 568 HNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEA 627
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
++A+ F++MI LKPN +TF+GVLSAC H GL++ + F SM ++G+EP +EHY C
Sbjct: 628 EKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGIEHYVC 686
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
MV LLG+AG +A++ I +MP K +W S+L AC N +L + AE ++ +P D
Sbjct: 687 MVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPAD 746
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN++A+ GMW ++ ++R+ G K+ G SWIEV++
Sbjct: 747 SGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNN 791
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 346/677 (51%), Gaps = 34/677 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + ++ C ++ G+ +H GL+ D++ G+ L+ MYAD L +A F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + ++ V W M+ + A+RL+ +M G EPN + L C+ DL
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASG-CEPNFATLACFLSVCATDADL 258
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G +H + LE + + NTLL MY KC L D + + ++ WN M
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLD----DAWRLFELMPQDDLVTWNGM 314
Query: 182 LSGGKQ----VHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
+SG Q V AF + + G + +TL SL+ + G + +
Sbjct: 315 ISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGY------ 368
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
I+ C F +SALVD+Y C + A+ L+D AA A +V + ++MIS
Sbjct: 369 -----IVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYD-----AARAI-DVVIGSTMIS 417
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GYVLN +EEA+ + ++ + ++ T S L C ++ Q+HG ++ + Y
Sbjct: 418 GYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALP--LGQQIHGYVLRNAY 475
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
E V S L+D+YA+ G + + +F ++ +KD V W+ +I +++G A LFR
Sbjct: 476 ERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQ 535
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M N IS+ L C+ L ++ GK++H +K + + ++LIDMY KCG
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++ L +F+FMP+++ VSW II G +G KE+++ M + KP+ +TFL ++SA
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISA 655
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C HAGLVEE +F M +Y + P +EH+ CMVDL ++G D A Q IA+MPFKPD
Sbjct: 656 CAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAG 715
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
IW ++L AC H N +L I +++L P + YV++SN+ A G WD +SKVR+ K
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 653 KLG-EKKAGMSWIEVSS 668
K G SW++V++
Sbjct: 776 DNKILKIPGYSWVDVNN 792
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 221/671 (32%), Positives = 351/671 (52%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +S+K GK +H + GL +D+F G++L+ +YA+ L+DA LFD + +K+
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDS 124
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y N AI+++ M + ++PN ++ VL C+ LDLG +H
Sbjct: 125 VLWNVMLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
LE D+ + NTLL MY KC L RKLFD ++ WN ++SG
Sbjct: 184 IAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQ------SDLVSWNGIISGYVQ 237
Query: 185 ----GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ H F + G + + +T S +L C +++ L+L + + +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFAS----FLPC--VNELLSLKHCKEIHGYIIRHAV 291
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
++ F SAL+D+Y C + A+K Q SS+ + + +MISGYVLN
Sbjct: 292 VL-----DVFLKSALIDIYFKCRDVEMAQKNLCQSSSF------DTVVCTTMISGYVLNG 340
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+N+EA+ + M S TF+S A L N ++HG I+ + + V
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALN--LGKELHGSIIKTKLDEKCHV 398
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
GS ++D+YA+ G + A +F+R+ +KD + W+ +I C+++G A LFR M
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ IS L C+ L +L GK++H +K + +SLIDMY KCG ++
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRR 518
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M E++ VSW II G +G KE +A F EM+++ ++P+ +TFLG++SAC HAG
Sbjct: 519 VFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQ 578
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E + M EYG+ +EHY C+ D+ G+AG +A + I MPF PD +W ++L
Sbjct: 579 VDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLL 638
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC H N +L + ++ L P + YV+L+NV A G W + KVR K+ G +K
Sbjct: 639 GACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRK 698
Query: 659 -AGMSWIEVSS 668
G SWIEV++
Sbjct: 699 VPGYSWIEVNN 709
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/608 (24%), Positives = 249/608 (40%), Gaps = 109/608 (17%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY SL DA LF + +W M+ +T + N+A+ Y ML G V P+ +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG-VSPDKY 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY 164
+ V+KAC + +G+++HE + L+ D + ++L+ +Y + G L+ + LFD
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 165 SNWAASAYGNVALWNSMLSG---------------------------------------- 184
+ LWN ML+G
Sbjct: 120 PQ------KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEA 173
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G Q+H V G E + +L+ MY KC + LF+ +P+ D+VSW GII
Sbjct: 174 MLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIIS 233
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G YV N
Sbjct: 234 G----------------------------------------------------YVQNGLM 241
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA L + S+G+ DS TF S L C+N L + + ++HG I+ LD + S
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFL-PCVNEL-LSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LID+Y + +V+ A + + D V + +I G +G N A FR ++
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
SS+ + LA+L GK++H +K +++ ++++DMY KCG +D +F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ E+D + W +I C QNGR EAI F++M + + ++ G LSAC + +
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I M + L L ++D+ + G + + ++ M K ++ W S++ A
Sbjct: 480 YGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEK-NEVSWNSIISA 537
Query: 601 CETHNNTK 608
H + K
Sbjct: 538 YGNHGDLK 545
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK +H +IK L D++ ++L+ MYA +LN + ++F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KN VSW ++++AY ++ + L++ ML G ++P+ + ++ AC +G +
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQV 579
Query: 122 DLGRLIHERITRE 134
D G + +T E
Sbjct: 580 DEGIRYYHLMTEE 592
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 239/758 (31%), Positives = 368/758 (48%), Gaps = 109/758 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CGQR+ I+ G+ LH + D +++MY+ S +D+ +FD++ RKN
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +V+AYT N+ A+ +++ ++ +P+ F V+KAC+ DL LG++IH
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
T+ L D + N L+ MY KCG + K+F+ N+ WNS++ G
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER------NLVSWNSIICGFS 178
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G VH VK G +E
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE----CSCFTL------ 250
+ SLIDMY KC + + LF+ ++++VSW +I G C F L
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298
Query: 251 ---SALVDMYSNCNVL--CEARKLFD--------------QYSSWAASAY---------- 281
D ++ NVL C R Q + A+A+
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Query: 282 ------------GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
V+ WN+++ GY N +A+ L + SG+ D +T S L AC
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + + + ++HG + +G +D +G +L+ LY G +A LF + + +V+
Sbjct: 419 SRMKSLH--YGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 476
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I G +++GL A LFR M++ + I V CS L++LR GK++H F +
Sbjct: 477 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 536
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K ++ +S+IDMY K G I +F + E+DV SW II G G +GR KEA+
Sbjct: 537 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 596
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F++M++ LKP++ TF G+L AC HAGLVE+ F M + +EP LEHY C+VD+L
Sbjct: 597 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 656
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG DDA +LI EMP PD IW+S+L +C H N L +A +LL PE P YV
Sbjct: 657 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 716
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++SN++A G WD + +VR K +G +K AG SWIEV
Sbjct: 717 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEV 754
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 205/510 (40%), Gaps = 130/510 (25%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C I++G ++H +K GL++++ N+L+ MY+ L++A LF
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
D+ +KNIVSW +M+ Y + L M E ++ + F VL C +
Sbjct: 263 DKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE 322
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L + +H R L+ + ++ N + Y +CG+L + ++FD S+ W
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSS------W 376
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N++L G G+++H F ++
Sbjct: 377 NALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR 436
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------- 241
G + SL+ +Y+ CG+ LF+ M R +VSW +I G
Sbjct: 437 NGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINL 496
Query: 242 -------------------CFECS------------CFTL-----------SALVDMYSN 259
C CS CF L S+++DMY+
Sbjct: 497 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 556
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
+ ++++FD+ +VA WN +I+GY ++ + +EA+ L + G+ D
Sbjct: 557 GGCIGLSQRIFDRLRE------KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDD 610
Query: 320 YTFTSALKACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+TFT L AC + L FN L +H + +L++ + ++D+ R G +
Sbjct: 611 FTFTGILMACSHAGLVEDGLEYFNQ--MLNLHNI----EPKLEHY--TCVVDMLGRAGRI 662
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
AL L +P D WS L+ C HG
Sbjct: 663 DDALRLIEEMPGDPDSRIWSSLLSSCRIHG 692
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 192/467 (41%), Gaps = 96/467 (20%)
Query: 111 VLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-- 165
+L+AC D+++GR +HE ++ + D VL ++ MY CGS +R +FD+
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 166 ---NWAA--SAYGNVALWNSMLSG--------------------------------GKQV 188
W A SAY L+ +S G+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
H K + +LI MY KCG +++ + +F MPER++VSW II G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICG------- 176
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+S L E+ F + M+ G EE+
Sbjct: 177 --------FSENGFLQESFNAFRE-----------------MLVG-------EESFV--- 201
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
D T + L C + A VHGL V G + +V ++LID+Y++
Sbjct: 202 --------PDVATLVTVLPVCAGEEDIEKGMA--VHGLAVKLGLNEELMVNNSLIDMYSK 251
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI--NSNQDVNQFIIS 426
+ A LF + KK++V+W+ +I G + + L + M ++ ++F I
Sbjct: 252 CRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTIL 311
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+VL VC + L+ K++H + + G + ++ + I Y +CG + +F M +
Sbjct: 312 NVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTK 371
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
V SW ++ G QN ++A+ + +M S L P+ T +L AC
Sbjct: 372 TVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/648 (32%), Positives = 337/648 (52%), Gaps = 40/648 (6%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G + D F G++L+ +YA+ + DA +LFD+M K+ V W M+ + PN A++++
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M +PN +++VL C+ + G +H + +D ++ N L+ MY K
Sbjct: 62 EDMRNC-QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 153 CGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
G L+ KLF+ + NV WN M++G V+ GF E L S +
Sbjct: 121 FGQLSDALKLFNTMPD------TNVVTWNGMIAG-------FVQNGFMDEASLLFSEM-- 165
Query: 211 YLKCGEIDDGLALFNFMPE----------RDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ G D + +F+P +++ + I+ F SAL+D+Y C
Sbjct: 166 -ISAGVSPDSITFASFLPSVTESASLKQGKEIHGY--ILRHGIALDVFLKSALIDIYFKC 222
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ A K+F Q S ++ + ++ISGYVLN N +A+ + + M ++
Sbjct: 223 RDVGMACKIFKQ------STNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAV 276
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T S L AC L N ++H I+ G + VGS ++D+YA+ G + A ++F
Sbjct: 277 TLASVLPACAGLATLN--LGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFR 334
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
R+P+KD V W+ +I C+++G A LFR M + IS+ L C+ L +L
Sbjct: 335 RMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHH 394
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK +H+F +K F+ E ++LIDMY KCG + +F M E++ VSW II G
Sbjct: 395 GKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGS 454
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G + ++A F +M++ ++P+ +TFL +LSAC HAG V++ F M EYG+ +E
Sbjct: 455 HGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARME 514
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY C+VDL G+AG ++A + I MPF PD +W ++L AC H N +L + + LL
Sbjct: 515 HYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDL 574
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
PE+ YV+LSNV+A G W S+ K+R KK G +K G SWIEV+
Sbjct: 575 DPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVN 622
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 219/537 (40%), Gaps = 119/537 (22%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G LH +I G D N L++MY+ F L+DA KLF+ M N+V+W M+ +
Sbjct: 92 GNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ 151
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + A L++ M+ G V P+ +++ L + + S L G+ IH I R + D
Sbjct: 152 NGFMDEASLLFSEMISAG-VSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVF 210
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSN------------WAASAYGNVAL----W----- 178
L + L+D+Y KC + K+F Q +N + + N AL W
Sbjct: 211 LKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEK 270
Query: 179 ---NSM--------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
N++ L+ GK++HA +K G ++ ++++DMY KCG +D
Sbjct: 271 MSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAY 330
Query: 222 ALFNFMPERDVVSWTGIIVGC----------------------FEC--------SCFTL- 250
+F MPE+D V W II C ++C +C L
Sbjct: 331 QIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLP 390
Query: 251 ------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
SAL+DMY C L AR +FD N
Sbjct: 391 ALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMRE------KNEVS 444
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS-----RFAL 341
WNS+I+ Y + E ++ L + G+ D TF + L AC + + R
Sbjct: 445 WNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMT 504
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ +G+ + + ++DL+ R G + A E +P D W L+ C H
Sbjct: 505 EEYGIPARMEHY------ACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVH 558
Query: 401 GLNSLAYLLFRDMINSNQDVNQ--FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G LA + R +++ + + + ++S+V S+R+ + + KRG +K
Sbjct: 559 GNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRK---IRSLMKKRGVQK 612
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 50/335 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C ++ GK LH I+K+GL + G+ ++ MYA L+ A+++F M
Sbjct: 278 LASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP 337
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V W ++T + N +P AI L+ M G + + SA L AC+ L G+
Sbjct: 338 EKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREG-LSYDCVSISAALSACANLPALHHGK 396
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS-------NWAASAYG--- 173
IH + + + + + L+DMY KCG+L+ R +FD N +AYG
Sbjct: 397 AIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHG 456
Query: 174 ----NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
++AL++ ML + G + + VT +++ G++D G+ F M E
Sbjct: 457 HLEVSLALFHKML-----------EDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTE 505
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS------SW-----AA 278
GI +C +VD++ L EA + W A
Sbjct: 506 E-----YGIPARMEHYAC-----IVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGAC 555
Query: 279 SAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHS 312
+GNV L + L+ +N LLS++H+
Sbjct: 556 RVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHA 590
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK++H +IK ++F + L+ MY +L+ A +F
Sbjct: 375 DCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVF 434
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KN VSW +++ AY S+ ++ L++ MLE G ++P+ + +L AC +G +
Sbjct: 435 DMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDG-IQPDHVTFLTILSACGHAGQV 493
Query: 122 DLGRLIHERITRE-----KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVA 176
D G +T E ++E+ ++D++ + G L F+ N S V
Sbjct: 494 DKGIQYFRCMTEEYGIPARMEH----YACIVDLFGRAGRLNEA-FETIKNMPFSPDDGV- 547
Query: 177 LWNSMLSGGKQVHA 190
W ++L G +VH
Sbjct: 548 -WGTLL-GACRVHG 559
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 347/668 (51%), Gaps = 40/668 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C RS+K GK +H I+K D+ N++L+MY SL DA K FD M +N+VSW
Sbjct: 167 CTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSW 226
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T M++ Y+ N + N AI +Y ML+ G P+ + +++KAC ++GD+DLGR +H +
Sbjct: 227 TIMISGYSQNGQENDAIIMYIQMLQSGYF-PDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG----GK 186
+ ++ + N L+ MY + G + +F S ++ W SM++G G
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIST------KDLISWASMITGFTQLGY 339
Query: 187 QVHAFCV-----KRGF-EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++ A + ++GF + + S+ E + G + + + +
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL--GRNVFA 397
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
GC +L DMY+ L A + F Q S ++ WN++I+ + +
Sbjct: 398 GC---------SLCDMYAKFGFLPSAIRAFYQIES------PDLVSWNAIIAAFSDSGDV 442
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI + +G+ D TF S L AC + + N Q+H I+ G + + V +
Sbjct: 443 NEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQ--GTQIHSYIIKIGLDKEAAVCN 500
Query: 361 NLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+L+ +Y + N+ A +F + + ++V+W+ ++ C +H + LF+ M+ S
Sbjct: 501 SLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENK 560
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ I+++L C+ LASL G QVH F VK G + LIDMY KCG + +
Sbjct: 561 PDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDV 620
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F D+VSW+ +IVG Q G EA+ F+ M ++PNE+T+LGVLSAC H GLV
Sbjct: 621 FGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLV 680
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
EE W + +M+ E G+ P EH CMVDLL +AGC +AE I +M F PD T+W ++L
Sbjct: 681 EEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLA 740
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
+C+TH N + AE +L P + + V+LSN++A++G W ++++R K++G +K
Sbjct: 741 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKV 800
Query: 659 AGMSWIEV 666
G SWI V
Sbjct: 801 PGQSWIAV 808
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 232/524 (44%), Gaps = 40/524 (7%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A+ +N + S++ Y ++ AC+ L G+ IH+ I + + D VL N +L
Sbjct: 140 ALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHIL 199
Query: 148 DMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRG 196
+MY KCGSL RK FD NV W M+SG Q ++ ++ G
Sbjct: 200 NMYGKCGSLKDARKAFDTMQ------LRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSG 253
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ + +T S+I G+ID G L +I ++ +AL+ M
Sbjct: 254 YFPDPLTFGSIIKACCIAGDIDLGRQLHGH-----------VIKSGYDHHLIAQNALISM 302
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y+ + A +F S+ ++ W SMI+G+ EA+ L + G
Sbjct: 303 YTRFGQIVHASDVFTMIST------KDLISWASMITGFTQLGYEIEALYLFRDMFRQGFY 356
Query: 317 -IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + F S AC +LL F Q+HG+ G + G +L D+YA+ G + SA
Sbjct: 357 QPNEFIFGSVFSACRSLLE--PEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSA 414
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ F+++ D+V+W+ +I + G + A F M+++ + S+L C
Sbjct: 415 IRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSP 474
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGI 494
++ +G Q+H++ +K G +KE SL+ MY KC + D +FK + E ++VSW I
Sbjct: 475 VTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAI 534
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
+ C Q+ +A E F+ M+ S KP+ IT +L C +E + + G
Sbjct: 535 LSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHC-FSVKSG 593
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
L + ++D+ + G A + PD W+S++
Sbjct: 594 LVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQ-NPDIVSWSSLI 636
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 192/439 (43%), Gaps = 36/439 (8%)
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
C+ + +E ++ S I++ K + L FNF P+ + G +C ++
Sbjct: 113 CLIKQHSRE-LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIR 171
Query: 252 AL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+L ++MY C L +ARK FD NV
Sbjct: 172 SLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ------LRNVVS 225
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
W MISGY N Q +AI + + SG D TF S +KAC + + Q+HG
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACC--IAGDIDLGRQLHGH 283
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
++ SGY+ I + LI +Y R G + A ++F + KD+++W+ +I G T+ G A
Sbjct: 284 VIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEA 343
Query: 407 YLLFRDMINSN-QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LFRDM N+FI SV C L G+Q+H C K G + SL D
Sbjct: 344 LYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCD 403
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G + + F + D+VSW II +G EAI +F +M+ + L P+ IT
Sbjct: 404 MYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGIT 463
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL +L AC + + I + + + GL+ ++ + + DA + ++
Sbjct: 464 FLSLLCACGSPVTINQGTQIHSYII-KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDV 522
Query: 586 PFKPDKTIWASMLKACETH 604
+ W ++L AC H
Sbjct: 523 SENANLVSWNAILSACLQH 541
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 189/495 (38%), Gaps = 116/495 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C I G+ LH +IK G + N L+SMY F + A +F ++ K++
Sbjct: 265 IKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDL 324
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+T +T A+ L+ M G +PN F++ +V AC + + GR IH
Sbjct: 325 ISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHG 384
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS-------NWAA--SAYGNVALWNS 180
+ L + +L DMY K G L + Y +W A +A+ + N
Sbjct: 385 MCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNE 444
Query: 181 -------------------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
++ G Q+H++ +K G +KE SL+
Sbjct: 445 AIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLT 504
Query: 210 MYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFE------------------------ 244
MY KC + D +F + E ++VSW I+ C +
Sbjct: 505 MYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNI 564
Query: 245 --------CS------------CFTLSA-----------LVDMYSNCNVLCEARKLFDQY 273
C+ CF++ + L+DMY+ C L AR +F
Sbjct: 565 TITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVF--- 621
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
++ ++ W+S+I GY EA+ L + + G+ + T+ L AC
Sbjct: 622 ---GSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSAC---- 674
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S L G + E++ + S ++DL AR G + A ++ D
Sbjct: 675 ---SHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPD 731
Query: 387 VVAWSGLIMGCTKHG 401
+ W L+ C HG
Sbjct: 732 ITMWKTLLASCKTHG 746
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + S++ G +HC +K GL D+ N L+ MYA SL A +F
Sbjct: 566 ITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQ 625
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+IVSW++++ Y + A+ L+ M G V+PN Y VL ACS G ++ G
Sbjct: 626 NPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLG-VQPNEVTYLGVLSACSHIGLVEEG 683
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 228/766 (29%), Positives = 361/766 (47%), Gaps = 117/766 (15%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++V L+ C + QG+ H +++ G+ + G LL MY + DA +F ++
Sbjct: 48 QLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
W M+ +T + ++A+ Y ML G++ P+ + + V+KAC + LG
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALG 166
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R++H++I E D + ++L+ Y + G + R LFD+ + + LWN ML
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS------KDGVLWNVML 220
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
+G G Q+H V G E
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLE 280
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF------ECSC----- 247
+ +L+ MY KCG + D LF+ MP+ D+V+W G+I G E SC
Sbjct: 281 MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340
Query: 248 --------------------------------------------FTLSALVDMYSNCNVL 263
F SAL+D+Y C +
Sbjct: 341 ISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDV 400
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
ARK+FDQ + ++ + +MISGYVLN N A+ + + M +S T
Sbjct: 401 EMARKIFDQRTPV------DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L ++HG I+ +G+ VGS ++D+YA+ G + A + F +
Sbjct: 455 SVLPACAGLAALT--LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 512
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KD V W+ +I C+++G A LFR M + + IS+ L C+ L +L GK+
Sbjct: 513 DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 572
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+HAF ++ F + ++LIDMY KCG +D +F M E++ VSW II G +GR
Sbjct: 573 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGR 632
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
K+++ F M+ ++P+ +TFL ++SAC HAG V+E F M E G+ +EHY
Sbjct: 633 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 692
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
CMVDL G+AG ++A +I MPF PD +W ++L AC H N +L + + L P+
Sbjct: 693 CMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQ 752
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+ YV+LSNV+A G W+S+ K+R K+ G +K G SWI+V++
Sbjct: 753 NSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNN 798
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK +H +++ D+F + L+ MY+ +L+ A ++F
Sbjct: 550 DCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 609
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KN VSW +++ AY ++ R ++ L++ ML G ++P+ + A++ AC +G +
Sbjct: 610 DTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQV 668
Query: 122 DLG 124
D G
Sbjct: 669 DEG 671
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 235/763 (30%), Positives = 359/763 (47%), Gaps = 108/763 (14%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L R++ + G R + ++H R G D+F N LL Y++ L DA LFD
Sbjct: 18 LARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFD 77
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +N+VSW ++++ YT + R + AI L+ + PN F+ ++VL+AC+ S +
Sbjct: 78 RMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVS 137
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVK------------------------------ 152
LG +H + L+ + + L+++Y K
Sbjct: 138 LGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYA 197
Query: 153 ---CGSLTRKLFDQYS---------NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKE 200
CG + +LFD+ A++ AL L GG+Q+H + + E +
Sbjct: 198 QIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSAL--GFLEGGRQIHGYAYRSATETD 255
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------- 241
+ LID+Y KC + LF+ M R++VSWT +I G
Sbjct: 256 TSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ 315
Query: 242 ------CFEC-----SCFTLSA-------------------------LVDMYSNCNVLCE 265
F C SC +L+A L+DMY+ C L E
Sbjct: 316 AGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTE 375
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR +FD + A +Y N+MI GY N EA+ + + + TF S
Sbjct: 376 ARAVFDALAEDDAISY------NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSL 429
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L + L + Q+HGLI+ SG LD S LID+Y++ V A +F+ L K
Sbjct: 430 LGVSSSQLAI--ELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK 487
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D+V W+ +I G ++ A LF ++ S N+F +++ V S LAS+ G+Q H
Sbjct: 488 DMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFH 547
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A+ +K G + + +LIDMY KCG I +G LF+ DV+ W +I Q+G A+
Sbjct: 548 AWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAE 607
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EA+ F+ M ++ ++PN +TF+GVLSAC HAG V E F SMK Y +EP +EHY +
Sbjct: 608 EALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASV 667
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
V+L G++G A++ I MP KP +W S+L AC N ++ AE L P D
Sbjct: 668 VNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDS 727
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEVS 667
YV+LSN+YA+ G+W + +R+ G K+ G SWIEV+
Sbjct: 728 GPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVT 770
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 346/663 (52%), Gaps = 106/663 (15%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
++ N F + +VLKAC+++ DL LG+ +H + + D + N+L+ +Y KCG R
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 159 KLFDQYSN-----WAA--SAYGN-------VALWNSM-LSG------------------- 184
LFD + W A S Y + V+L++ M LSG
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+++H + +K G++ + + +L+DMY K G ++D ++F+ + + D+VSW II
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185
Query: 241 GCF-------------------EC-SCFTLSA---------------------------- 252
GC C + FTLS+
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGS 245
Query: 253 -------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
L+DMYS CN + +AR +F ++ WN++ISG+ NE++EEA +
Sbjct: 246 DSFLGVGLIDMYSKCNSMDDARLVFKLMPER------DMIAWNAVISGHSQNEEDEEAAS 299
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L +H+ G+ + T ++ LK+ L N+ R Q+H L + SG+E D V ++LID
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCR---QIHALSLKSGFEFDNYVVNSLID 356
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
Y + G+V+ A +F P D+V ++ L+ + G A L+ +M + + F+
Sbjct: 357 TYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFV 416
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
SS+L C+ L++ +GKQVH +K GF + SL++MY KCG I+D F +P
Sbjct: 417 CSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
R +VSW+ +I G Q+G KEA+ F++M++ + PN IT + VL AC HAGLV EA
Sbjct: 477 VRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKH 536
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F SMK +G+EP EHY CM+DLLG+AG + A +L+ +MPF+ + +W ++L A H
Sbjct: 537 YFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIH 596
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSW 663
N L AE LLA PE +V+L+N+YA++GMWD +++VR+ K KK GMSW
Sbjct: 597 KNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSW 656
Query: 664 IEV 666
+EV
Sbjct: 657 LEV 659
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 175/433 (40%), Gaps = 95/433 (21%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + G+ LH +IK + D F G L+ MY+ S++DA +F M ++
Sbjct: 218 ALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERD 277
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+++W +++ ++ N+ A L+ M G + N S VLK+ + + R IH
Sbjct: 278 MIAWNAVISGHSQNEEDEEAASLFPLMHTEG-IGFNQTTLSTVLKSIAALQANYMCRQIH 336
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------YSNWAASAYGN 174
+ E+D ++N+L+D Y KCG + ++F++ + +A G
Sbjct: 337 ALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGE 396
Query: 175 VALW-----------------NSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
AL +S+L+ GKQVH +K GF + SL+
Sbjct: 397 EALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLV 456
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+MY KCG I+D F+ +P R +VSW+ +I G
Sbjct: 457 NMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGG--------------------------- 489
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
A YG +EA+ L + G+ + T S L A
Sbjct: 490 -------LAQHGYG------------------KEALQLFKQMLKVGVPPNHITLVSVLCA 524
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDV 387
C N + + + + G E + +IDL R G +++A+EL +++P + +
Sbjct: 525 C-NHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANA 583
Query: 388 VAWSGLIMGCTKH 400
+ W L+ H
Sbjct: 584 LVWGALLGAARIH 596
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 233/792 (29%), Positives = 372/792 (46%), Gaps = 137/792 (17%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+R ++ C S+K GK H R+I G D++ N L+ MY + LN A+K+F+
Sbjct: 43 IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLY-----------NHML--------------- 96
+M++++++S+ TM++ Y N A + N ML
Sbjct: 103 KMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDV 162
Query: 97 --EYGSVEPNGF---MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ G E GF ++ VLKACS+ D LG +H I R D V + LLDMY
Sbjct: 163 FLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA 222
Query: 152 KCGSL--TRKLFDQ--YSNW---------------------------------AASAYGN 174
KC L + K+F + NW + S Y +
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282
Query: 175 VALWNSMLSG---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
V + LS G Q+HA +K F + T+ +DMY KCG + D +FN +P+
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342
Query: 232 V-----------------------------------VSWTGIIVGC-------------- 242
+ +S +G C
Sbjct: 343 LQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402
Query: 243 ------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ ++++DMY C L EA +FD+ A + WN++I+ +
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVS------WNAVIAAHEQ 456
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N EE + L + + M D +T+ S LKAC + NS +++H I+ SG LD
Sbjct: 457 NGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNS--GMEIHNRIIKSGLGLDS 514
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VG LID+Y + G ++ A ++ R+ ++ +V+W+ +I G T + A+ F +M+
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + F + VL C+ LAS+ GKQ+H +K + ++L+DMY KCG + D
Sbjct: 575 SVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDS 634
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F+ P +D V+W +I G Q+G +EA+ YF+ M ++PN TF+ +L AC H
Sbjct: 635 ALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHM 694
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G +++ F +M EYGLEP +EHY CM+D++G++G +A +LI EMPF+ D IW +
Sbjct: 695 GFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRT 754
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK--KL 654
+L C+ H N ++ +L PED S ++LSN+YA GMW +S++RK + KL
Sbjct: 755 LLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKL 814
Query: 655 GEKKAGMSWIEV 666
+K+ G SWIEV
Sbjct: 815 -KKEPGCSWIEV 825
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 228/712 (32%), Positives = 366/712 (51%), Gaps = 80/712 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFT-SLNDAH 58
++LR + L+ SI QGK LH +K GL + + N LL MYA ++ DAH
Sbjct: 3 LELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAH 62
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
LFDEM +N SW TM+ Y +++L++ M + N + ++ V+ + +
Sbjct: 63 NLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLM-----PQKNDYSWNVVISGFAKA 117
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK---LFDQY-SNWAASAYGN 174
G+LD+ + + + R + V N+++ Y + G R+ LF + SN + G+
Sbjct: 118 GELDVAKKLFNEMPRR----NGVAWNSMIHGYARNG-FAREAVGLFKELNSNPLEKSCGD 172
Query: 175 VALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ S++ GKQVHA + E + V ++SLI++Y KCG +D +
Sbjct: 173 TFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLK 232
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
M E D F+LSAL+ Y+NC + +A ++F S+
Sbjct: 233 MMDEVDD---------------FSLSALIMGYANCGRMSDAVRIFRTKSNPC------FV 271
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
+WNS+ISGYV N + +A L++ + ++ + +DS T T L AC + N+++A Q+HG
Sbjct: 272 VWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSS--TGNAQYAKQMHG 329
Query: 346 LIVTSGYELDYIVGSNLIDLYARL-------------------------------GNVKS 374
+ G IV S ID Y++ G ++
Sbjct: 330 YVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRD 389
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A +F +P K +++W+ +I+G ++ A +F M + +++F ++SV+ C+C
Sbjct: 390 AKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACAC 449
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
++SL G+QV A + G E + TSL+D Y KCG I++G LF M + D VSW +
Sbjct: 450 ISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSM 509
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
++G NG E + F EM Q+ L+P +ITF GVLSAC H GLVEE F MK +Y
Sbjct: 510 LMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYH 569
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
++P +EHY CMVDL +AGC +A L+ MPF+ D ++W+S+L+ C H + L +A
Sbjct: 570 IDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVA 629
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIE 665
+Q++ +PE S YV LS ++AT G W+S + VRK +K +K G SW +
Sbjct: 630 QQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKHPGFSWAD 681
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 340/665 (51%), Gaps = 30/665 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G +HC I+ G D+ TG L+ MY+ L+ A +F EM +N
Sbjct: 177 LKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNS 236
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W+ ++ Y N R ++LY ML+ G + + +++ ++C+ +LG +H
Sbjct: 237 VCWSAVIAGYVRNDRFTEGLKLYKVMLDEG-MGVSQATFASAFRSCAGLSAFELGTQLHA 295
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ YD ++ LDMY KC + RK+F+ + N ++ AL +
Sbjct: 296 YALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHN--ALIVGYARQDQV 353
Query: 188 VHAFCVKRGFEKE--DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FE 244
+ A + R +K D SL C I L + + G+ V C +
Sbjct: 354 LEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYL---------EGIQLHGLAVKCGLD 404
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ + ++DMY+ C L EA +FD A + WN++I+ + NE EE +
Sbjct: 405 FNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS------WNAIIAAHEQNEHVEETL 458
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + S M D YTF S +KAC N + ++VHG ++ SG LD+ VGS +ID
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALN--YGMEVHGRVIKSGMGLDWFVGSAIID 516
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT--KHGLNSLAYLLFRDMINSNQDVNQ 422
+Y + G + A ++ RL ++ V+W+ +I G + K G N+L+Y F M+ +
Sbjct: 517 MYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY--FSRMLQVGVIPDN 574
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F ++VL +C+ LA++ GKQ+H +K + ++++DMY KCG + D +F+
Sbjct: 575 FTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK 634
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
P+RD V+W+ +I +G ++AI F+EM +KPN F+ VL AC H G V++
Sbjct: 635 APKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG 694
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F M+ YGL+P +EHY CMVDLLG++G ++A +LI MPF+ D IW ++L C
Sbjct: 695 LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICR 754
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
N ++ A LL P+D S YV+LSNVYA GMW ++K+R K +K+ G
Sbjct: 755 LQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGC 814
Query: 662 SWIEV 666
SWI+V
Sbjct: 815 SWIQV 819
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 160/692 (23%), Positives = 276/692 (39%), Gaps = 146/692 (21%)
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNG-FMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
S P +AI H + + P +S + + CS ++ G+ H +IT
Sbjct: 17 SQTTPPYAI----HSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPT 72
Query: 140 TVLMNTLLDMYVKCGSLTR--KLFDQYS-----NWAASAYG------------------- 173
+ N LL Y KC +L +FD+ +W +G
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 174 -NVALWNSMLSG--------------------------------------------GKQV 188
+V WNSMLS G QV
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------- 241
H ++ GF+ + VT T+L+DMY C ++D +F MPER+ V W+ +I G
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252
Query: 242 ----------------------------CFECSCFTL--------------------SAL 253
C S F L +A
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT 312
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+DMY+ C+ + +ARK+F+ + + ++ N++I GY +Q EA+ + + S
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSH------NALIVGYARQDQVLEALEIFRSLQKS 366
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ D + + AL AC + + +Q+HGL V G + + V + ++D+YA+ G +
Sbjct: 367 YLDFDEISLSGALTACSAIKGYLE--GIQLHGLAVKCGLDFNICVANTILDMYAKCGALM 424
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A +F + KD V+W+ +I ++ LF M+ S + + + SV+K C+
Sbjct: 425 EACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACA 484
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+L G +VH +K G + +++IDMY KCG + + + + + ER VSW
Sbjct: 485 GKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNS 544
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II G + + A++YF M+Q + P+ T+ VL C + VE I +
Sbjct: 545 IISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI---L 601
Query: 554 GLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN-NTKLV 610
L+ H + Y +VD+ + G D+ + + P K D W++M+ A H +
Sbjct: 602 KLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHGLGEDAI 660
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
+ E L + + ++ + A +G D
Sbjct: 661 KLFEEMQLQNVKPNHTIFISVLRACAHMGFVD 692
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 220/666 (33%), Positives = 344/666 (51%), Gaps = 28/666 (4%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ CG G+ +HC+ +K G +D+ G +L+ MY D +FDEM KN
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT++++ Y N + I L N M G V PNGF ++ VL A + ++ G +H
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEG-VNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
I + E+ T + N L+ MY+K + + D + + + + WN M+ G
Sbjct: 229 AMIVKNGFEFTTFVCNALICMYLK----SEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G + F + V L+ + + ++ NF + G++ +E
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTV--FCTALKLCSQQRELNFTKQLHC----GVVKNGYE 338
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ +AL+ YS C+ + EA KLF A A NV W +MI G+V N NE+A+
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLFSM-----ADAAHNVVTWTAMIGGFVQNNNNEKAV 393
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G+ + +T+++ L S Q+H I+ + YE V + L+D
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVLAGK------PSSLLSQLHAQIIKAYYEKVPSVATALLD 447
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
Y + GNV + +F+ +P KD+VAWS ++ G + + A +F ++ N++
Sbjct: 448 AYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYT 507
Query: 425 ISSVLKVCSC-LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
SSV+ CS A++ GKQ+HA VK G ++L+ MY K G I+ +F
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
ERD+VSW +I G GQ+G AK+A+ FQ M L +++TF+GVL+AC HAGLVEE
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F M +Y ++ +EHY CMVDL +AG FD A +I MPF TIW ++L AC
Sbjct: 628 KYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMS 662
H N +L + AE+L++ P D YV+LSN++A G W+ + VRK ++ +K+AG S
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747
Query: 663 WIEVSS 668
WIE+ +
Sbjct: 748 WIEIKN 753
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 32/362 (8%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A +LFD+ + +++ +N ++ + N + EA+ L +HSSG+ +D T + A
Sbjct: 57 AHQLFDE------TPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCA 110
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK C L F+ QVH + SG+ D VG++L+D+Y + + + +F + K
Sbjct: 111 LKVCGVL--FDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK 168
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
+VV+W+ L+ G ++GLN L M + N F ++VL + + + G QVH
Sbjct: 169 NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A VK GFE +LI MYLK + D A+F M RD V+W +I G G
Sbjct: 229 AMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYL 288
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACR-----------HAGLVEEAWTIFTSMKPEYG 554
E F M + +K + F L C H G+V+ + ++
Sbjct: 289 EGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT--- 345
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-CETHNNTKLVSII 613
++ + D+A +L + + W +M+ + +NN K V +
Sbjct: 346 ---------ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLF 396
Query: 614 AE 615
+
Sbjct: 397 CQ 398
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 241/751 (32%), Positives = 366/751 (48%), Gaps = 94/751 (12%)
Query: 9 ALRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
ALR C G R +H + I GLS GN L+ +YA + A ++F+E++ +
Sbjct: 47 ALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVR 106
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+ VSW +++ Y N A+RLY M G V P ++ S++L AC+ + LGRLI
Sbjct: 107 DNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV-PTPYVLSSILSACTKTELFQLGRLI 165
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLF------------DQYSNWAASAYG 173
H ++ ++ +T + N L+ +Y++C S L ++F S A +G
Sbjct: 166 HVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHG 225
Query: 174 NVAL--WNSM-LSG-----------------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ AL ++ M LSG GKQ+H++ +K G + + SL
Sbjct: 226 DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL 285
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFECSCFTLSALVD--- 255
+D+Y+K G+I++ L +F+ +VV W ++V F+ L+A V
Sbjct: 286 LDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNK 345
Query: 256 -----MYSNCNVLCE----------------------ARKLFDQYS--SWAASAY----- 281
M C E + L D YS W A
Sbjct: 346 FTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDM 405
Query: 282 ---GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+V W SMI+GYV +E +EA+ + + G+ D+ SA+ AC + +
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ- 464
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
Q+H + SGY D + + L+ LYAR G K A F + K+ + W+GLI G
Sbjct: 465 -GSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFA 523
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ GL A +F M + N F S + + LA +++GKQ+HA +K G+ E
Sbjct: 524 QSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETE 583
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+LI +Y KCG I+D F M +R+ VSW II C Q+GR EA+ F +M Q
Sbjct: 584 ISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQG 643
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
LKP+++TF+GVL+AC H GLVEE F SM E+G+ P +HY C+VD+LG+AG D A
Sbjct: 644 LKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRA 703
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
++ + EMP D +W ++L AC+ H N ++ A+ LL P D + YV+LSN YA
Sbjct: 704 KRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVT 763
Query: 639 GMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
G W S ++RK K G K+ G SWIEV +
Sbjct: 764 GKWASRDQIRKIMKDRGVRKEPGRSWIEVKN 794
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 217/507 (42%), Gaps = 41/507 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +++GK LH ++K G+S D +LL +Y + +A ++FD
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD 306
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R N+V W M+ AY + ++ ML G V PN F Y +L+ C+ +G++ LG
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAG-VRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
IH + + D + L+DMY K G L + ++ D +V W SM++
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEE------KDVVSWTSMIA 419
Query: 184 GGKQVHAFCVKR----------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
G Q H FC + G +++ L S I + G +
Sbjct: 420 GYVQ-HEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIH--------- 469
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ V + + LV +Y+ C + EA +SS+ A + WN +ISG
Sbjct: 470 --ARVYVSGYSADVSIWNGLVYLYARCGISKEA------FSSFEAIEHKEGITWNGLISG 521
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
+ + EEA+ + + +G + +TF S++ A NL + Q+H ++ +GY
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQ--GKQIHARVIKTGYT 579
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ + + LI LY + G+++ A F + K++ V+W+ +I C++HG A LF M
Sbjct: 580 SETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQM 639
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ VL CS + + G + + G ++D+ + G+
Sbjct: 640 KQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQ 699
Query: 473 IDDGLALFKFMP-ERDVVSWTGIIVGC 498
+D + MP D + W ++ C
Sbjct: 700 LDRAKRFVEEMPIPADSMVWRTLLSAC 726
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 17/325 (5%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL- 341
A +N ++G++ + E+ + L + M + + F AL+AC R+ L
Sbjct: 5 GAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRAC---RGSGRRWPLV 61
Query: 342 -QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
++H + G I+G+ LIDLYA+ G V+ A +F L +D V+W ++ G ++
Sbjct: 62 PEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQN 121
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
GL A L+R+M S +++SS+L C+ + G+ +H K+GF E
Sbjct: 122 GLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG 181
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+LI +YL+C +F M D V++ +I G Q G A+ F EM S L
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLS 241
Query: 521 PNEITFLGVLSACRHAGLVEE-----AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
P+ +T +L+AC G + + ++ + M +Y +E L +DL ++G
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL------LDLYVKSGDI 295
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKA 600
++A Q I + + + +W ML A
Sbjct: 296 EEALQ-IFDSGDRTNVVLWNLMLVA 319
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 341/669 (50%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C ++ G+ +H GL +D++ G+ L+ MYAD L+ A ++FD M ++
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y A+ L+ M G +PN + L C+ DL G +H
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASG-CDPNFATLACFLSVCAAEADLLSGVQLHT 272
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
+ LE + + NTL+ MY KC L + + + ++ WN M+SG Q
Sbjct: 273 LAVKYGLEPEVAVANTLVSMYAKCQCLE----EAWRLFGLMPRDDLVTWNGMISGCVQNG 328
Query: 188 -----VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ FC K G + + VTL SL+ + G + + I+
Sbjct: 329 LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGY-----------IVR 377
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
C F +SALVD+Y C + A+ +FD S +V + ++MISGYVLN +
Sbjct: 378 NCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSI------DVVIGSTMISGYVLNRMS 431
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
E A+ + ++ + G+ ++ S L AC ++ R ++HG ++ + YE V S
Sbjct: 432 EAAVKMFRYLLALGIKPNAVMVASTLPACASMAAM--RIGQELHGYVLKNAYEGRCYVES 489
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+Y++ G + + +F ++ KD V W+ +I ++G A LFR MI
Sbjct: 490 ALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKY 549
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N ISS+L C+ L ++ GK++H +K + ++LIDMY KCG ++ L +F
Sbjct: 550 NNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVF 609
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ MPE++ VSW II G +G KE++ M + K + +TFL ++SAC HAG V+
Sbjct: 610 EHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQ 669
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E +F M EY +EP +EH CMVDL +AG D A Q IA+MPFKPD IW ++L A
Sbjct: 670 EGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHA 729
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKA 659
C H N +L I +++L P + YV++SN+ A G WD +SK+R+ K K +K
Sbjct: 730 CRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIP 789
Query: 660 GMSWIEVSS 668
G SW++V++
Sbjct: 790 GYSWVDVNN 798
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 28/276 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C +++ G+ LH ++K + + L+ MY+ L+ +H +F +M+
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMS 512
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W +M++++ N P A+ L+ M+ G V+ N S++L AC+ + G+
Sbjct: 513 AKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEG-VKYNNVTISSILSACAGLPAIYYGK 571
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH I + + D + L+DMY KCG+ L ++F+ N WNS++S
Sbjct: 572 EIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPE------KNEVSWNSIIS 625
Query: 184 G-------GKQVHAFCV--KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+ V C + GF+ + VT +LI G++ +GL LF M E +
Sbjct: 626 AYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHI- 684
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
E LS +VD+YS L +A +
Sbjct: 685 ---------EPQVEHLSCMVDLYSRAGKLDKAMQFI 711
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 16/294 (5%)
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI------VGSNLIDLYARLGNV 372
+Y + L+ C+ + L++H VTSG LD + + L+ +Y
Sbjct: 36 AYRLLALLRGCVAPSHLP--LGLRIHARAVTSGL-LDAAGPGPAALQTRLVGMYVLARRF 92
Query: 373 KSALELFHRLPKKDV---VAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQFIISS 427
+ A+ +F LP+ + W+ LI G T G + LA L + M S+ + +
Sbjct: 93 RDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPY 152
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+K C+ L +L G+ VH G +++ ++LI MY G +D +F M ERD
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V W ++ G + G A+ F+ M S PN T LS C + + T
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ +YGLEP + +V + + C ++A +L MP + D W M+ C
Sbjct: 273 -LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP-RDDLVTWNGMISGC 324
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 343/652 (52%), Gaps = 33/652 (5%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HC IK G + I+T NN++S YA + A K+F E ++++ VSW TM+ + +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A+ M YG +G+ + ++LK + G +++G+ +H + + E + +
Sbjct: 82 ETALEFLKSMKRYG-FAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
LLDMY KC ++ D + + + N WN+++SG QV RG T
Sbjct: 141 LLDMYAKC----ERVEDAFEVFKSINIRNSVTWNALISGYAQVG----DRG------TAF 186
Query: 206 SLID-MYLKCGEIDDG-------LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
L+D M L+ EIDDG L + + I+ +A++ Y
Sbjct: 187 WLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S C + +A ++FD A ++ WNSM++ Y++N Q EEA L + G
Sbjct: 247 SECGSIEDAERVFD-----GAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEP 301
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY--ARLGNVKSA 375
D YT+TS + A + +HGL++ G E + ++LI +Y + ++ A
Sbjct: 302 DIYTYTSVISAAFE--GSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
L +F L KD V+W+ ++ G ++ GL+ A F +M + ++ + S+VL+ CS L
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDL 419
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
A+L+ G+QVH +K GFE +SLI MY KCG I+D F P+ ++W +I
Sbjct: 420 ATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLI 479
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+GR K A+ F M R+K + ITF+ VL+AC H GLVEE W+ SM+ +YG+
Sbjct: 480 FGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGI 539
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P +EHY CM+DLLG+AG D+A+ LI MPF+PD +W ++L AC T + +L S +A
Sbjct: 540 PPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVAS 599
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
LL PE+ YV+LS+++ L W+ + +++ K+ G KK G SWIEV
Sbjct: 600 HLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEV 651
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 238/520 (45%), Gaps = 42/520 (8%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ G+ +H ++K G ++F G+ LL MYA + DA ++F + +N V+W +++
Sbjct: 116 VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISG 175
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y A L + M E VE + ++ +L L +H +I + L
Sbjct: 176 YAQVGDRGTAFWLLDCM-ELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLAS 234
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFC 192
DT + N ++ Y +CGS+ ++FD A ++ WNSML+ ++ AF
Sbjct: 235 DTTVCNAIITAYSECGSIEDAERVFD-----GAIETRDLVTWNSMLAAYLVNNQEEEAFQ 289
Query: 193 V-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+ GFE + T TS+I + G +L + +R + E
Sbjct: 290 LFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGL-----------EFLV 338
Query: 248 FTLSALVDMY--SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++L+ MY S+ + EA +F+ + + WNS+++G+ + +E+A+
Sbjct: 339 PISNSLIAMYLKSHSKSMDEALNIFESLEN------KDHVSWNSILTGFSQSGLSEDALK 392
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
++ S + ID Y F++ L++C +L + QVH L++ SG+E + V S+LI +
Sbjct: 393 FFENMRSQYVVIDHYAFSAVLRSCSDLATL--QLGQQVHVLVLKSGFEPNGFVASSLIFM 450
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++ G ++ A + F PK +AW+ LI G +HG +A LF M + ++
Sbjct: 451 YSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 510
Query: 426 SSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+VL CS + + G + + G +ID+ + G +D+ AL + MP
Sbjct: 511 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 570
Query: 485 -ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
E D + W ++ C G + A +++ L+P E
Sbjct: 571 FEPDAMVWKTLLGACRTCGDIELASQVASHLLE--LEPEE 608
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 225/500 (45%), Gaps = 49/500 (9%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD-EMARKNIVSWTTMVTA 78
K +H +I+K+GL+ D N +++ Y++ S+ DA ++FD + +++V+W +M+ A
Sbjct: 218 KLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAA 277
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y N + A +L+ M G EP+ + Y++V+ A G+ +H + + LE+
Sbjct: 278 YLVNNQEEEAFQLFLEMQVLG-FEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEF 336
Query: 139 DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL-WNSMLSGGKQVHAFCVKRGF 197
+ N+L+ MY+K S K D+ N S + WNS+L+G Q F
Sbjct: 337 LVPISNSLIAMYLKSHS---KSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKF 393
Query: 198 EKEDVTLTSLIDMYLKCGEIDD--GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ + +ID Y + LA + V+ ++ FE + F S+L+
Sbjct: 394 FENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL----VLKSGFEPNGFVASSLIF 449
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C V+ +ARK FD A+ + WNS+I GY + + + A+ L + +
Sbjct: 450 MYSKCGVIEDARKSFD------ATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRV 503
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARL 369
+D TF + L AC S L G E DY + + IDL R
Sbjct: 504 KLDHITFVAVLTAC-------SHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRA 556
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN--SNQDVNQFIIS 426
G + A L +P + D + W L+ C G LA + ++ + ++S
Sbjct: 557 GRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLS 616
Query: 427 SV---LKVCSCLASLRR------GKQVHAFC---VK---RGFEKEDITLTSLIDMYLKCG 471
S+ L+ + AS++R K+V + VK R F ED + + ++YL+ G
Sbjct: 617 SMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLG 676
Query: 472 EIDDGLALFKFMPERDVVSW 491
E+ + + ++ +++S+
Sbjct: 677 ELMEEIRRLDYVANSEIMSY 696
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 122/287 (42%), Gaps = 64/287 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C +++ G+ +H ++K G + F ++L+ MY+ + DA K FD + +
Sbjct: 413 LRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS 472
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG----- 124
++W +++ Y + R A+ L+ +++ V+ + + AVL ACS G ++ G
Sbjct: 473 IAWNSLIFGYAQHGRGKIALDLF-FLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLK 531
Query: 125 ----------RLIH-----------ERITREK-------LEYDTVLMNTLLDMYVKCGSL 156
R+ H R+ K E D ++ TLL CG +
Sbjct: 532 SMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDI 591
Query: 157 TRKLFDQYSN--------------WAASAYGNVALWNSMLS--------GGKQVHAFC-- 192
+L Q ++ +S +G++ WN S G K+V +
Sbjct: 592 --ELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWI 649
Query: 193 -VK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
VK R F ED + + ++YL+ GE+ + + +++ +++S+
Sbjct: 650 EVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEIMSY 696
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S +L R H +K G T ++I Y KCGEI +F +RD VSW
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G G + A+ + + M + + +F +L G VE + SM +
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH-SMMVK 128
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G E ++ ++D+ + +DA ++ + + T W +++
Sbjct: 129 MGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALI 173
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 220/669 (32%), Positives = 345/669 (51%), Gaps = 65/669 (9%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
S+D+ + N++L+ Y + DA LF++M +N+VSWT M++ Y + A ++
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M G + P+ +++ L A G+LD+ + + E D V+ +L++Y +
Sbjct: 215 MHREGLL-PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCV-KRGFEKEDVTLTSLID 209
S+ + + N W++M++ GG+ A V +R K T+LI
Sbjct: 274 SVLDTAIKFFESMIER---NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALIT 330
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+CG IDD LF +PE VVSW +I G Y ++ EA++L
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVSWNALITG---------------YMQNGMVNEAKEL 375
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ + N W MI+GY N ++EEA+ LL +H SGM + TS AC
Sbjct: 376 FDKMP------FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
N++ + QVH L V G + + + LI +Y + N++ A ++F R+ KD+V+
Sbjct: 430 SNIVALET--GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487
Query: 390 WSGLIMGCTKHGL-----NSLAYLLFRDMIN-------------SNQDVNQF-------- 423
W+ + ++ L N+ +L RD ++ SN+ + F
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547
Query: 424 -----IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
I++ +L VC L + + G+Q+H +K G + E I +LI MY KCG D
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRR 606
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M ERD+ +W II G Q+G +EAI +Q M + + PNE+TF+G+L+AC HAGL
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E W F SM +YGL P EHY CMVDLLG+ G AEQ I +MP +PD IW+++L
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-K 657
AC+ H N ++ AE+L P + YVMLSN+Y++LGMW +++VRK K+ G K
Sbjct: 727 GACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIK 786
Query: 658 KAGMSWIEV 666
+ G SW ++
Sbjct: 787 EPGCSWTQI 795
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 242/552 (43%), Gaps = 112/552 (20%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
+ +A ++FD M R++I++W +M++AY N P+ A LY+ ++ A+L
Sbjct: 50 VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD------AISGGNMRTGAIL- 102
Query: 114 ACSLSGDLDLGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAAS 170
LSG LGR++ R+ LE +TV N ++ YV+ G +T R+LFD A
Sbjct: 103 ---LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD------AM 153
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+V+ WNSML+G Y ++ D LF MPER
Sbjct: 154 PSRDVSSWNSMLTG--------------------------YCHSLQMVDARNLFEKMPER 187
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
++VSWT +I G YG +
Sbjct: 188 NLVSWTVMISG---------------------------------------YGRI------ 202
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
E + +A + +H G+ D F SAL A L N + +L+V L + +
Sbjct: 203 -------ENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV--LALKT 253
Query: 351 GYELDYIVGSNLIDLYARLGNV-KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G+E D ++G+ ++++Y+R +V +A++ F + +++ WS +I + G A +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 410 F-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
+ RD + S I+ + + LA R ++ E ++ +LI Y+
Sbjct: 314 YERDPVKS--------IACRTALITGLAQCGRIDDARIL-FEQIPEPIVVSWNALITGYM 364
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G +++ LF MP R+ +SW G+I G QNGR++EA+ QE+ +S + P+ +
Sbjct: 365 QNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTS 424
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+ AC + +E T S+ + G + + ++ + G+ + A Q+ + M K
Sbjct: 425 IFFACSNIVALETG-TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK 483
Query: 589 PDKTIWASMLKA 600
D W S L A
Sbjct: 484 -DIVSWNSFLAA 494
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G+ R+++ + + R++ ++DI + N+ L+ L++A FD M ++ VSWT
Sbjct: 465 GKCRNMEYARQVFSRMV----TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
T+++AY ++ N A+ + M + PN + + +L C G +G+ IH +
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIK 579
Query: 134 EKLEYDTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----- 187
++ + ++ N L+ MY KCG + +R++FD ++ WN++++G Q
Sbjct: 580 LGMDSELIVANALISMYFKCGCADSRRIFDLMEE------RDIFTWNTIITGYAQHGLGR 633
Query: 188 ----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
++ G +VT L++ G +D+G F M +
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ 679
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 23/246 (9%)
Query: 338 RFALQ-VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
RFA++ HG + SG + + DL RLG V A E+F +P++D++AW+ +I
Sbjct: 22 RFAVRHAHGELEVSG------CSARIRDL-GRLGRVGEAREVFDAMPRRDIIAWNSMISA 74
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG-FEK 455
+G+ A L+ + N ++S ++ G+ + A V G E+
Sbjct: 75 YCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL---------GRVLEARRVFDGMLER 125
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ ++I Y++ G+I LF MP RDV SW ++ G + + +A F++M
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMP 185
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ L + G H +AW IF M E GL P ++ + + G
Sbjct: 186 ERNLVSWTVMISGYGRIENHG----KAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNL 240
Query: 576 DDAEQL 581
D E L
Sbjct: 241 DVLESL 246
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + K G+ +H IK G+ ++ N L+SMY D+ ++FD M ++I +W
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK-CGCADSRRIFDLMEERDIFTW 619
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
T++T Y + AI++Y HM E V PN + +L ACS +G +D G
Sbjct: 620 NTIITGYAQHGLGREAIKMYQHM-ESAGVLPNEVTFVGLLNACSHAGLVDEG 670
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 222/681 (32%), Positives = 356/681 (52%), Gaps = 39/681 (5%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD ++ ALR C + +KQGK +H RI G +I +L+ Y A +
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 61 FDEMARKNIVS-WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F VS W +++AYT+N R A++L++ + V P+ + Y VLKAC G
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVAL 177
+ GR IH + + L +D + ++L++MY KC KLFD++ +V
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQ------RDVGC 174
Query: 178 WNSMLS----GGKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+++S GK A + GFE VT T ++ + ++ G + +
Sbjct: 175 WNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELI 234
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
ER ++ F LSALVDMY C L A+++F++ N WN
Sbjct: 235 ERRIL-----------LDAFVLSALVDMYGKCGCLEMAKEVFEKIPR------KNAITWN 277
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+MI+GY L + I LL ++ G T TS + A + R +HG I+
Sbjct: 278 AMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQL--RHGKFIHGYIL 335
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ ++D + +LID Y + G V SA +F + K +VV+W+ +I G G + A
Sbjct: 336 RNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALH 395
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
++ +M + + SS L CS LA+L +G+++H + E +I + +L+DMY
Sbjct: 396 IYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYA 455
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG++D+ LF +P+RD+VSWT +I G +G+A EA+ F EM + ++ + +TFL
Sbjct: 456 KCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLA 515
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE-MPF 587
VLSAC HAGLV+E + F M +Y ++P +EHY C++DLLG+AG +A +++
Sbjct: 516 VLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKET 575
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+ D + +++ AC HNN L I + L+ P+DPS Y++LSN+YA++ WD + KV
Sbjct: 576 RSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKV 635
Query: 648 RKAGKKLGEKKA-GMSWIEVS 667
R+ K+LG KK+ G SWIE++
Sbjct: 636 RRKMKELGLKKSPGCSWIEIN 656
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 220/669 (32%), Positives = 345/669 (51%), Gaps = 65/669 (9%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
S+D+ + N++L+ Y + DA LF++M +N+VSWT M++ Y + A ++
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M G + P+ +++ L A G+LD+ + + E D V+ +L++Y +
Sbjct: 215 MHREGLL-PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCV-KRGFEKEDVTLTSLID 209
S+ + + N W++M++ GG+ A V +R K T+LI
Sbjct: 274 SVLDTAIKFFESMIER---NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALIT 330
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+CG IDD LF +PE VVSW +I G Y ++ EA++L
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVSWNALITG---------------YMQNGMVNEAKEL 375
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ + N W MI+GY N ++EEA+ LL +H SGM + TS AC
Sbjct: 376 FDKMP------FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
N++ + QVH L V G + + + LI +Y + N++ A ++F R+ KD+V+
Sbjct: 430 SNIVALET--GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487
Query: 390 WSGLIMGCTKHGL-----NSLAYLLFRDMIN-------------SNQDVNQF-------- 423
W+ + ++ L N+ +L RD ++ SN+ + F
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547
Query: 424 -----IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
I++ +L VC L + + G+Q+H +K G + E I +LI MY KCG D
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRR 606
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M ERD+ +W II G Q+G +EAI +Q M + + PNE+TF+G+L+AC HAGL
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E W F SM +YGL P EHY CMVDLLG+ G AEQ I +MP +PD IW+++L
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-K 657
AC+ H N ++ AE+L P + YVMLSN+Y++LGMW +++VRK K+ G K
Sbjct: 727 GACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIK 786
Query: 658 KAGMSWIEV 666
+ G SW ++
Sbjct: 787 EPGCSWTQI 795
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 242/552 (43%), Gaps = 112/552 (20%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
+ +A ++FD M R++I++W +M++AY N P+ A LY+ ++ A+L
Sbjct: 50 VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD------AISGGNMRTGAIL- 102
Query: 114 ACSLSGDLDLGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAAS 170
LSG LGR++ R+ LE +TV N ++ YV+ G +T R+LFD A
Sbjct: 103 ---LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD------AM 153
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+V+ WNSML+G Y ++ D LF MPER
Sbjct: 154 PSRDVSSWNSMLTG--------------------------YCHSLQMVDARNLFEKMPER 187
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
++VSWT +I G YG +
Sbjct: 188 NLVSWTVMISG---------------------------------------YGRI------ 202
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
E + +A + +H G+ D F SAL A L N + +L+V L + +
Sbjct: 203 -------ENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV--LALKT 253
Query: 351 GYELDYIVGSNLIDLYARLGNV-KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G+E D ++G+ ++++Y+R +V +A++ F + +++ WS +I + G A +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 410 F-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
+ RD + S I+ + + LA R ++ E ++ +LI Y+
Sbjct: 314 YERDPVKS--------IACRTALITGLAQCGRIDDARIL-FEQIPEPIVVSWNALITGYM 364
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G +++ LF MP R+ +SW G+I G QNGR++EA+ QE+ +S + P+ +
Sbjct: 365 QNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTS 424
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+ AC + +E T S+ + G + + ++ + G+ + A Q+ + M K
Sbjct: 425 IFFACSNIVALETG-TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK 483
Query: 589 PDKTIWASMLKA 600
D W S L A
Sbjct: 484 -DIVSWNSFLAA 494
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G+ R+++ + + R++ ++DI + N+ L+ L++A FD M ++ VSWT
Sbjct: 465 GKCRNMEYARQVFSRMV----TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
T+++AY ++ N A+ + M + PN + + +L C G +G+ IH +
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIK 579
Query: 134 EKLEYDTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----- 187
++ + ++ N L+ MY KCG + +R++FD ++ WN++++G Q
Sbjct: 580 LGMDSELIVANALISMYFKCGCADSRRIFDLMEE------RDIFTWNTIITGYAQHGLGR 633
Query: 188 ----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
++ G +VT L++ G +D+G F M +
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ 679
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 23/246 (9%)
Query: 338 RFALQ-VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
RFA++ HG + SG + + DL RLG V A E+F +P++D++AW+ +I
Sbjct: 22 RFAVRHAHGELEVSG------CSARIRDL-GRLGRVGEAREVFDAMPRRDIIAWNSMISA 74
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG-FEK 455
+G+ A L+ + N ++S ++ G+ + A V G E+
Sbjct: 75 YCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL---------GRVLEARRVFDGMLER 125
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ ++I Y++ G+I LF MP RDV SW ++ G + + +A F++M
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMP 185
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ L + G H +AW IF M E GL P ++ + + G
Sbjct: 186 ERNLVSWTVMISGYGRIENHG----KAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNL 240
Query: 576 DDAEQL 581
D E L
Sbjct: 241 DVLESL 246
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + K G+ +H IK G+ ++ N L+SMY D+ ++FD M ++I +W
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK-CGCADSRRIFDLMEERDIFTW 619
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
T++T Y + AI++Y HM E V PN + +L ACS +G +D G
Sbjct: 620 NTIITGYAQHGLGREAIKMYQHM-ESAGVLPNEVTFVGLLNACSHAGLVDEG 670
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/677 (31%), Positives = 349/677 (51%), Gaps = 38/677 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I+ L C +++ G+ +H + ++ GL D+ N +L+MYA S+ +A ++F
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +K++VSWT + Y R A ++ M + G V PN Y +VL A S L
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV-PNRITYISVLNAFSSPAAL 243
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWN 179
G+ +H RI E DT + L+ MY KCGS R++F++ N ++ WN
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN------RDLIAWN 297
Query: 180 SMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ G +V+ + G +T L++ + + G + + + +
Sbjct: 298 TMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA 357
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
S G+ +AL+ MYS C + +AR +FD+ +V W +M
Sbjct: 358 GFTSDIGV-----------QNALISMYSRCGSIKDARLVFDKM------VRKDVISWTAM 400
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I G + EA+T+ + +G+ + T+TS L AC + + ++H +V +
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE--WGRRIHQQVVEA 458
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G D VG+ L+++Y+ G+VK A ++F R+ ++D+VA++ +I G H L A LF
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLF 518
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+ ++ ++L C+ SL +++H K GF + +L+ Y KC
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKC 578
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G D +F+ M +R+V+SW II G Q+GR ++A+ F+ M +KP+ +TF+ +L
Sbjct: 579 GSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLL 638
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC HAGL+EE F SM ++ + P +EHY CMVDLLG+AG D+AE LI MPF+ +
Sbjct: 639 SACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQAN 698
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
IW ++L AC H N + AE L ++ YV LS++YA GMWDS +K+RK
Sbjct: 699 TRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKL 758
Query: 651 GKKLG-EKKAGMSWIEV 666
++ G K+ G SWI+V
Sbjct: 759 MEQRGVTKEPGRSWIQV 775
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/604 (22%), Positives = 263/604 (43%), Gaps = 103/604 (17%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
L+ + N Y +LK C DL GR +H+ I + + D +N L++MY++CGS
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSG----------------------------- 184
+ R+++ + S + + WN+M+ G
Sbjct: 74 IEEARQVWKKLSYMERTVHS----WNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTI 129
Query: 185 ---------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G+++H ++ G + +++MY KCG I++ +F+ M +
Sbjct: 130 MSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK 189
Query: 230 RDVVSWTGIIVGCFEC----SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG--- 282
+ VVSWT I G +C + F + ++ + + +SS AA +G
Sbjct: 190 KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAV 249
Query: 283 ------------------------------------------NVALWNSMISGYVLNEQN 300
++ WN+MI G
Sbjct: 250 HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYW 309
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EEA + + + G+ + T+ L AC+N + + ++H + +G+ D V +
Sbjct: 310 EEASEVYNQMQREGVMPNKITYVILLNACVNSAALH--WGKEIHSRVAKAGFTSDIGVQN 367
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LI +Y+R G++K A +F ++ +KDV++W+ +I G K G + A ++++M + +
Sbjct: 368 ALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEP 427
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N+ +S+L CS A+L G+++H V+ G + +L++MY CG + D +F
Sbjct: 428 NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVF 487
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M +RD+V++ +I G + KEA+ F + + LKP+++T++ +L+AC ++G +E
Sbjct: 488 DRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 547
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
A I T ++ + G +V + G F DA + +M K + W +++
Sbjct: 548 WAREIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGG 605
Query: 601 CETH 604
H
Sbjct: 606 SAQH 609
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 144/302 (47%), Gaps = 6/302 (1%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ + A+ ++ ++ G ++S + LK CI + + + QVH I+ D
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVA--GRQVHQHIIQHRTVPDQYT 60
Query: 359 GSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ LI++Y + G+++ A +++ +L ++ V +W+ +++G ++G A L R M
Sbjct: 61 VNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQH 120
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
++ I S L C +L G+++H ++ G + +++MY KCG I++
Sbjct: 121 GLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEA 180
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F M ++ VVSWT I G GR++ A FQ+M Q + PN IT++ VL+A
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
++ + + + G E +V + + G + D Q+ ++ D W +
Sbjct: 241 AALKWGKAVHSRI-LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNT 298
Query: 597 ML 598
M+
Sbjct: 299 MI 300
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 219/666 (32%), Positives = 343/666 (51%), Gaps = 28/666 (4%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ CG G+ +HC+ +K G +D+ G +L+ MY D +FDEM KN
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT++++ Y N + I L N M G V PNGF ++ VL A + ++ G +H
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEG-VNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
I + E+ T + N L+ MY+K + + D + + + + WN M+ G
Sbjct: 229 AMIVKNGFEFTTFVCNALICMYLK----SEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G + F + V L+ + + ++ NF + G++ +E
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTV--FCTALKLCSQQRELNFTKQLHC----GVVKNGYE 338
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ +AL+ YS C+ + EA KLF A A NV W +MI G+V N N++A+
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLFSM-----ADAAHNVVTWTAMIGGFVQNNNNKKAV 393
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G+ + +T+++ L S Q+H I+ + YE V + L+D
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVLAGK------PSSLLSQLHAQIIKAYYEKVPSVATALLD 447
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
Y + GNV + +F+ +P KD+VAWS ++ G + + A +F ++ N++
Sbjct: 448 AYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYT 507
Query: 425 ISSVLKVCSC-LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
SSV+ CS A++ GKQ+HA VK G ++L+ MY K G I+ +F
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
ERD+VSW +I G GQ+G AK+A+ FQ M L +++TF+GVL+AC HAGLVEE
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F M +Y ++ EHY CMVDL +AG FD A +I MPF TIW ++L AC
Sbjct: 628 KYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMS 662
H N +L + AE+L++ P D YV+LSN++A G W+ + VRK ++ +K+AG S
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747
Query: 663 WIEVSS 668
WIE+ +
Sbjct: 748 WIEIKN 753
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 156/354 (44%), Gaps = 31/354 (8%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A +LFD+ + +++ +N ++ + N + EA+ L +HSSG+ +D T + A
Sbjct: 57 AHQLFDE------TPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCA 110
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK C L F+ QVH + SG+ D VG++L+D+Y + + + +F + K
Sbjct: 111 LKVCGVL--FDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK 168
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
+VV+W+ L+ G ++GLN L M + N F ++VL + + + G QVH
Sbjct: 169 NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A VK GFE +LI MYLK + D A+F M RD V+W +I G G
Sbjct: 229 AMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYL 288
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACR-----------HAGLVEEAWTIFTSMKPEYG 554
E F M + +K + F L C H G+V+ + ++
Sbjct: 289 EGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT--- 345
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
++ + D+A +L + + W +M+ +NN K
Sbjct: 346 ---------ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNK 390
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 338/669 (50%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +I G+ +H GL D+F G+ L+ MYA+ L DA ++FD MA ++
Sbjct: 153 VKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDC 212
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y + A+ L+ M G EPN + L + DL G +H
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASG-CEPNFATLACFLSVSATESDLFFGVQLHT 271
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
+ LE + + NTL+ MY KC L D + + ++ WN M+SG Q
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLD----DGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 188 -----VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ FC K G + VTL SL+ + G L + I+
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY-----------IVR 376
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
C F +SALVD+Y C + A+ ++D +S +V + ++MISGYVLN +
Sbjct: 377 NCVHMDVFLVSALVDIYFKCRAVRMAQSVYD------SSKAIDVVIGSTMISGYVLNGMS 430
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EA+ + ++ G+ ++ S L AC ++ + ++H + + YE V S
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAM--KLGQELHSYALKNAYEGRCYVES 488
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+YA+ G + + +F ++ KD V W+ +I ++G A LFR+M
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ ISSVL C+ L ++ GK++H +K + ++LIDMY KCG ++ +F
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ MPE++ VSW II G G KE+++ + M + K + +TFL ++SAC HAG V+
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E +F M EY + P +EH+ CMVDL +AG D A +LI +MPFKPD IW ++L A
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H N +L I +++L P + YV++SN+ A G WD +SKVR+ K +K
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIP 788
Query: 660 GMSWIEVSS 668
G SW++V++
Sbjct: 789 GYSWVDVNN 797
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C ++K G+ LH +K + + L+ MYA L+ +H +F +++
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W +M++++ N P A+ L+ M G V+ + S+VL AC+ + G+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-VKYSNVTISSVLSACASLPAIYYGK 570
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGNVA 176
IH + + + D + L+DMY KCG+L ++F+ N ++YG
Sbjct: 571 EIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYG 630
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L +S + + + GF+ + VT +L+ G++ +GL LF M E ++
Sbjct: 631 LVKESVSLLRHMQ----EEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ F C +VD+YS L +A +L
Sbjct: 687 ---MEHFAC-------MVDLYSRAGKLDKAMELI 710
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L+ C++ + + LQVHG VT+G + D + + L+ +Y + A+ +F L
Sbjct: 44 AVLRGCVSPSHLS--LGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 383 PKKDV---VAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQFIISSVLKVCSCLAS 437
P+ + W+ LI G T G A L + M S + V+K C+ L +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+ G+ VH G + + ++LI MY G + D +F M ERD V W ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT----SMKPEY 553
+ G A+ F +M S +PN T AC + E+ F ++ +Y
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATL-----ACFLSVSATESDLFFGVQLHTLAVKY 276
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
GLE + +V + + C DD +L MP + D W M+ C
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 236/757 (31%), Positives = 353/757 (46%), Gaps = 108/757 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S+K GK +H II+ G D+ L++MY S++DA +FD+M +N+
Sbjct: 37 LKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNV 96
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ R A + M G + PN + Y ++L A + +G L+ + +H
Sbjct: 97 ISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI-PNSYTYVSILNANASAGALEWVKEVHS 155
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNW-------AASAYGNV 175
L D + N L+ MY K GS+ R +FD +W A G
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215
Query: 176 A--LWNSMLSGG--------------------------KQVHAFCVKRGFEKEDVTLTSL 207
A L+ M GG K+VH K GF + +L
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNAL 275
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC----FTL------------- 250
I MY KCG IDD +F+ M +RDV+SW +I G + C FT+
Sbjct: 276 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDS 335
Query: 251 --------------------------------------SALVDMYSNCNVLCEARKLFDQ 272
SA V MY C + +A+ +FD+
Sbjct: 336 TTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK 395
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
A NV WN+MI G + EA++L + G D+ TF + L A N+
Sbjct: 396 L------AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA--NV 447
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+ +VH + +G +D VG+ L+ +YA+ GN A ++F + +++V W+
Sbjct: 448 GEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTV 506
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +HG A+ LF M+ + S+L C+ +L K+VH+ V G
Sbjct: 507 MISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAG 566
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ +L+ MY KCG +DD +F M ERDV SWT +I G Q+GR +A+ F
Sbjct: 567 LVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFV 626
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M KPN +F+ VLSAC HAGLV+E F S+ +YG+EP +EHY CMVDLLG+A
Sbjct: 627 KMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRA 686
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G ++A+ I MP +P W ++L AC T+ N ++ A++ L P+ S YV+LS
Sbjct: 687 GQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 746
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
N+YA G W+ VR ++ G K+ G SWIEV +
Sbjct: 747 NIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDN 783
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 243/601 (40%), Gaps = 125/601 (20%)
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M+ Y A+++Y+ M G +PN Y ++LKAC L G+ IH I +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------------------ 162
+ D + L++MYVKCGS+ + +FD
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 163 ---QYSNWAASAYGNVALWNSMLSGG-----KQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
Q + ++Y V++ N+ S G K+VH+ V G + +L+ MY K
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G IDD +F+ M ERD+ SWT +I G + EA LF Q
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQ---------------EAFSLFLQ-- 222
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
M G L T LS +++S + T T AL+
Sbjct: 223 ---------------MERGGCL----PNLTTYLSILNASAI-----TSTGALE------- 251
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+ +VH +G+ D VG+ LI +YA+ G++ A +F + +DV++W+ +I
Sbjct: 252 ----WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMI 307
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++G A+ +F M + S+L + K+VH V+ G
Sbjct: 308 GGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLV 367
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ ++ + MY++CG IDD +F + R+V +W +I G Q +EA++ F +M
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQM 427
Query: 515 IQSRLKPNEITFLGVLSA----------------CRHAGLVE-EAWTIFTSMKPEYG--- 554
+ P+ TF+ +LSA AGLV+ M + G
Sbjct: 428 RREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTM 487
Query: 555 ---------LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM---PFKPDKTIWASMLKACE 602
+E ++ + M+ L Q GC +A L +M PD T + S+L AC
Sbjct: 488 YAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA 547
Query: 603 T 603
+
Sbjct: 548 S 548
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 15/373 (4%)
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI GY E+A+ + S + G + T+ S LKAC + ++ ++ ++H I+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSL--KWGKKIHAHIIQ 58
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
SG++ D V + L+++Y + G++ A +F ++ +++V++W+ +I G +G A+
Sbjct: 59 SGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F M N + S+L + +L K+VH+ V G + +L+ MY K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G IDD +F M ERD+ SWT +I G Q+GR +EA + F +M + PN T+L +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 530 L--SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
L SA G +E + + G L ++ + + G DDA +L+ +
Sbjct: 239 LNASAITSTGALEWVKEVHKH-AGKAGFISDLRVGNALIHMYAKCGSIDDA-RLVFDGMC 296
Query: 588 KPDKTIWASML-----KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
D W +M+ C T + + E + D + Y+ L N + + G W+
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP----DSTTYLSLLNTHVSTGAWE 352
Query: 643 SLSKVRKAGKKLG 655
+ +V K ++G
Sbjct: 353 WVKEVHKHAVEVG 365
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V L C +++ K +H + GL D+ GN L+ MYA S++DA ++F
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++ SWT M+ + R A+ L+ M G +PNG+ + AVL ACS +G +
Sbjct: 595 DDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEG-FKPNGYSFVAVLSACSHAGLV 653
Query: 122 DLGR 125
D GR
Sbjct: 654 DEGR 657
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 239/781 (30%), Positives = 358/781 (45%), Gaps = 124/781 (15%)
Query: 2 DLRRIVEALRH-CGQRRSI---------------KQGKSLHCRIIKYGLSQDIFTGNNLL 45
D R+ + +R CGQ I K GK +H II+ G D+ L+
Sbjct: 202 DAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALV 261
Query: 46 SMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG 105
+MY S+ DA +FD+M +N++SWT M+ R A L+ M G + PN
Sbjct: 262 NMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI-PNS 320
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
+ Y ++L A + +G L+ + +H L D + N L+ MY K GS+ R +FD
Sbjct: 321 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 380
Query: 164 YS-----NWAASAYG------------------------NVALWNSMLSGG--------- 185
+ +W G N+ + S+L+
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440
Query: 186 --KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
K VH + GF + +LI MY KCG IDD +F+ M +RDV+SW ++ G
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLA 500
Query: 244 ECSC----FTL------------------------------------------------- 250
+ C FT+
Sbjct: 501 QNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFR 560
Query: 251 --SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
SA + MY C + +AR LFD+ S +V WN+MI G EA++L
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLS------VRHVTTWNAMIGGAAQQRCGREALSLFL 614
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ G D+ TF + L A N+ + +VH +G +D VG+ L+ Y++
Sbjct: 615 QMQREGFIPDATTFINILSA--NVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSK 671
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
GNVK A ++F + +++V W+ +I G +HG A+ F M+ + S+
Sbjct: 672 CGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSI 731
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L C+ +L K+VH V G + +L+ MY KCG IDD ++F M ERDV
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV 791
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
SWT +I G Q+GR EA+ +F +M KPN +++ VL+AC HAGLV+E F S
Sbjct: 792 FSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLS 851
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M +YG+EP +EHY CMVDLLG+AG ++AE I MP +PD W ++L AC T+ N +
Sbjct: 852 MTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLE 911
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ A++ L P+ S YV+LSN+YA G W+ VR ++ G K+ G SWIEV
Sbjct: 912 MAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVD 971
Query: 668 S 668
+
Sbjct: 972 N 972
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 226/545 (41%), Gaps = 114/545 (20%)
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF 161
+ F Y +L+ C D+ L + +H I + +E + + N LL +Y++CG L R++F
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176
Query: 162 DQYSNWAASAYGNVALWNSMLSG------------------------------------- 184
D+ N+ +W +M+ G
Sbjct: 177 DKLLK------KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 185 -------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
GK++HA ++ GF+ + T+L++MY+KCG I+D +F+ M ER+V+SWT
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I G + YG
Sbjct: 291 MIGGL------------------------------------AHYG--------------- 299
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ +EA L + G +SYT+ S L A N + +VH V +G LD
Sbjct: 300 -RGQEAFHLFLQMQREGFIPNSYTYVSILNA--NASAGALEWVKEVHSHAVNAGLALDLR 356
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VG+ L+ +YA+ G++ A +F + ++D+ +W+ +I G +HG A+ LF M +
Sbjct: 357 VGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNG 416
Query: 418 QDVNQFIISSVLKVCSCLAS---LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N S+L S +AS L K VH + GF + +LI MY KCG ID
Sbjct: 417 CLPNLTTYLSILNA-SAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSID 475
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F M +RDV+SW ++ G QNG EA F +M Q L P+ T+L +L+
Sbjct: 476 DARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNT-- 533
Query: 535 HAGLVEEAWTIFTSMKP-EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H W E GL + + + G DDA L ++ + T
Sbjct: 534 HGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR-HVTT 592
Query: 594 WASML 598
W +M+
Sbjct: 593 WNAMI 597
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 19/424 (4%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
II E + + + L+ +Y C L AR++FD+ N+ +W +MI GY
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLK------KNIYIWTTMIGGYAEY 197
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E+A+ + + + T+ S LKAC +N ++ ++H I+ SG++ D
Sbjct: 198 GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNL--KWGKKIHAHIIQSGFQSDVR 255
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + L+++Y + G+++ A +F ++ +++V++W+ +I G +G A+ LF M
Sbjct: 256 VETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREG 315
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N + S+L + +L K+VH+ V G + +L+ MY K G IDD
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M ERD+ SWT +I G Q+GR +EA + F +M ++ PN T+L +L+A A
Sbjct: 376 VVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAS 435
Query: 538 LVEEAWT-IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
W + E G L ++ + + G DDA +L+ + D W +
Sbjct: 436 TSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDA-RLVFDGMCDRDVISWNA 494
Query: 597 ML-----KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
M+ C T + + E L+ D + Y+ L N + + + +++V K
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVP----DSTTYLSLLNTHGSTDALEWVNEVHKHA 550
Query: 652 KKLG 655
+ G
Sbjct: 551 VETG 554
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 8/321 (2%)
Query: 288 NSMISGYVLNEQN----EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
N+ + G N ++A+ +L G+ IDS+++ + L+ C+ + A QV
Sbjct: 83 NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDI--LLAKQV 140
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H I+ SG E + V + L+ +Y R G ++ A ++F +L KK++ W+ +I G ++G
Sbjct: 141 HVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHA 200
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A ++ M N+ S+LK C C +L+ GK++HA ++ GF+ + T+L
Sbjct: 201 EDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETAL 260
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++MY+KCG I+D +F M ER+V+SWT +I G GR +EA F +M + PN
Sbjct: 261 VNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNS 320
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
T++ +L+A AG +E + S GL L +V + ++G DDA +
Sbjct: 321 YTYVSILNANASAGALEWVKEVH-SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 379
Query: 584 EMPFKPDKTIWASMLKACETH 604
M + D W M+ H
Sbjct: 380 GMT-ERDIFSWTVMIGGLAQH 399
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 41/275 (14%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L+ C ++ I K +H IIK G+ Q+++ N LL +Y L A ++FD++ +
Sbjct: 122 VNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLK 181
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
KNI WTTM+ Y A+R+Y+ M + +PN Y ++LKAC +L G+
Sbjct: 182 KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKK 240
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD---------------------- 162
IH I + + D + L++MYVKCGS+ + +FD
Sbjct: 241 IHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGR 300
Query: 163 -----------QYSNWAASAYGNVALWNSMLSGG-----KQVHAFCVKRGFEKEDVTLTS 206
Q + ++Y V++ N+ S G K+VH+ V G + +
Sbjct: 301 GQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNA 360
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ MY K G IDD +F+ M ERD+ SWT +I G
Sbjct: 361 LVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 358/667 (53%), Gaps = 32/667 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG ++ G+ +H +IK GL D+F GN L+ MY ++++A K+FD M N+
Sbjct: 153 IKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNL 212
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +M+ A++ N + L ML + P+ +L C+ G++D+G IH
Sbjct: 213 VSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHG 272
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ L + ++ N ++ MY KCG L + ++ + NV WN+M+S
Sbjct: 273 LAVKLGLSEEVMVNNAMVYMYSKCGYLN----EAQMSFVKNNNKNVVSWNTMIS------ 322
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEID-DGLALFNFMPE-------RDVVSWTGI-IV 240
AF ++ G E L L +M ++ E+ + + + N +P R + G
Sbjct: 323 AFSLE-GDVNEAFNL--LQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFR 379
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
CF+ + +A + Y+ C L A K+F S+ WN++I G+ N
Sbjct: 380 HCFQHVELS-NAFILAYAKCGALNSAEKVFHGIGDKTVSS------WNALIGGHAQNGDP 432
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+A+ LL + SG D +T +S L AC +L + ++ ++HG ++ +G E D+ VG+
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSL--QYGKEIHGYVLRNGLETDFFVGT 490
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L+ Y G SA LF R+ K++V+W+ +I G +++GL + LFR ++
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++ I SV CS L++LR GK+ H + +K ++ S+IDMY K G I + +F
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVF 610
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ +++V SW IIV G +G KEAI ++ M + P+ T++G+L AC HAGLVE
Sbjct: 611 DGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVE 670
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F M+ +EP LEHY C++D+L +AG DDA +L+ EMP + D IW+S+L++
Sbjct: 671 EGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRS 730
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C T ++ +A++LL P+ YV+LSN+YA LG WD + +VR+ K++G +K A
Sbjct: 731 CRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDA 790
Query: 660 GMSWIEV 666
G SWIEV
Sbjct: 791 GCSWIEV 797
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 170/620 (27%), Positives = 293/620 (47%), Gaps = 55/620 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG ++ I+ G+ LH + D L+ MYA S D+ +FD M KN
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++ W +V+ YT N ++++ ++ +P+ F + +V+KAC D+ LG +IH
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + L D + N L+ MY KCG++ K+FD N+ WNSM+
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE------TNLVSWNSMIC--- 220
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP------ERDV---VSWTG 237
AF + GF ++ L L++M + G + D + + +P E D+ +
Sbjct: 221 ---AFS-ENGFSRDSFDL--LMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ +G E +A+V MYS C L EA+ S+ + NV WN+MIS + L
Sbjct: 275 VKLGLSE-EVMVNNAMVYMYSKCGYLNEAQM------SFVKNNNKNVVSWNTMISAFSLE 327
Query: 298 EQNEEAITLLSHIHSSG--MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
EA LL + G M + T + L AC++ L R ++HG ++
Sbjct: 328 GDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQL--RSLKELHGYSFRHCFQ-- 383
Query: 356 YIVGSN-LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
++ SN I YA+ G + SA ++FH + K V +W+ LI G ++G A L M
Sbjct: 384 HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S Q + F ISS+L C+ L SL+ GK++H + ++ G E + TSL+ Y+ CG+
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKAS 503
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
LF M ++++VSW +I G QNG E++A F++ + ++ +EI + V AC
Sbjct: 504 SARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACS 563
Query: 535 HAGLV----EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
+ E + +++ E ++D+ ++GC ++ ++ + D
Sbjct: 564 QLSALRLGKEAHGYVLKALQTEDAFVG-----CSIIDMYAKSGCIKESRKVFDGL---KD 615
Query: 591 KTI--WASMLKACETHNNTK 608
K + W +++ A H + K
Sbjct: 616 KNVASWNAIIVAHGIHGHGK 635
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 194/475 (40%), Gaps = 110/475 (23%)
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT-LLDMYVKCGSL--TRKLFDQYSNW 167
+L+AC D++ GR +H+ ++ + ++NT L+ MY CGS +R +FD
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET- 107
Query: 168 AASAYGNVALWNSMLSG------------------------------------------- 184
N+ WN+++SG
Sbjct: 108 -----KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDV 162
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+ +H +K G + +L+ MY KCG +D+ + +F+FMPE ++VSW +I
Sbjct: 163 RLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICA- 221
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F + F+ R FD
Sbjct: 222 FSENGFS-----------------RDSFD------------------------------- 233
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
L+ + G+ D T + L C + + +HGL V G + +V + +
Sbjct: 234 --LLMEMLGEEGLLPDVVTVVTILPVCAGEGEVD--IGMGIHGLAVKLGLSEEVMVNNAM 289
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-- 420
+ +Y++ G + A F + K+VV+W+ +I + G + A+ L ++M +++
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N+ I +VL C LR K++H + + F+ +++ + I Y KCG ++ +F
Sbjct: 350 NEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELS-NAFILAYAKCGALNSAEKVF 408
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+ ++ V SW +I G QNG ++A+ +M S +P+ T +L AC H
Sbjct: 409 HGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 194/505 (38%), Gaps = 121/505 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + G +H +K GLS+++ N ++ MY+ LN+A F
Sbjct: 247 DVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF 306
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGD 120
+ KN+VSW TM++A++ N A L M G ++ N VL AC
Sbjct: 307 VKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQ 366
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L + +H R ++ L N + Y KCG+L K+F + S+ W
Sbjct: 367 LRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSS------W 419
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+++ G GK++H + ++
Sbjct: 420 NALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLR 479
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE---------- 244
G E + TSL+ Y+ CG+ LF+ M ++++VSW +I G +
Sbjct: 480 NGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLAL 539
Query: 245 --------------------CSCFTLSAL-------------------------VDMYSN 259
+C LSAL +DMY+
Sbjct: 540 FRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAK 599
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
+ E+RK+FD NVA WN++I + ++ +EAI L + G D
Sbjct: 600 SGCIKESRKVFDGLKD------KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDR 653
Query: 320 YTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+T+ L AC L+ ++ ++ + Y + LID+ AR G + AL
Sbjct: 654 FTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY---ACLIDMLARAGRLDDALR 710
Query: 378 LFHRLPKK-DVVAWSGLIMGCTKHG 401
L + +P++ D WS L+ C G
Sbjct: 711 LVNEMPEEADNRIWSSLLRSCRTFG 735
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 346/672 (51%), Gaps = 41/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C Q +S+ + K +H +K + D + L +Y + A +LFDE+ ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W ++ AY N + AI LY+ ML G V PN + Y VLKACS ++ G IH
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
LE D + L+D Y KCG L ++LF S + +V WN+M++G
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS------HRDVVAWNAMIAGC-S 186
Query: 188 VHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++ C + G T+ ++ + + G AL + R + G
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN--G 244
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++VG + L+DMY+ C L ARK+FD N W++MI GYV +
Sbjct: 245 VVVG---------TGLLDMYAKCQCLLYARKIFD------VMGVRNEVSWSAMIGGYVXS 289
Query: 298 EQNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ +EA+ L I M T S L+AC L + + ++H I+ G LD
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR--GRKLHCYIIKLGXVLDI 347
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
++G+ L+ +YA+ G + A+ F + KD V++S ++ GC ++G ++A +FR M S
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
D + + VL CS LA+L+ G H + + RGF + + +LIDMY KCG+I
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F M D+VSW +I+G G +G EA+ F +++ LKP++ITF+ +LS+C H+
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E F +M ++ + P +EH CMVD+LG+AG D+A I MPF+PD IW++
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L AC H N +L +++++ + PE +V+LSN+Y+ G WD + +R K G
Sbjct: 588 LLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Query: 657 KK-AGMSWIEVS 667
KK G SWIE++
Sbjct: 648 KKIPGCSWIEIN 659
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 171/442 (38%), Gaps = 106/442 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L G+ +++ GK+LH ++ + G LL MYA L A K+FD M
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW+ M+ Y + A+ L++ M+ +++P +VL+AC+ DL GR
Sbjct: 273 VRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAY----------G 173
+H I + D +L NTLL MY KCG + + FD + + ++ G
Sbjct: 333 KLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG 392
Query: 174 NVALWNSM-----LSG------------------GKQVHAFC-----VKRGFEKEDVTLT 205
N A+ S+ LSG H FC + RGF + +
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LIDMY KCG+I +FN M D+VSW +I+G
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIG------------------------ 488
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
Y ++ EA+ L + + G+ D TF
Sbjct: 489 ----------------------------YGIHGLGMEALGLFHDLLALGLKPDDITFICL 520
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELF 379
L +C S L + G + D+ + ++D+ R G + A
Sbjct: 521 LSSC-------SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573
Query: 380 HRLP-KKDVVAWSGLIMGCTKH 400
+P + DV WS L+ C H
Sbjct: 574 RNMPFEPDVRIWSALLSACRIH 595
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L+ C SL K++H +K + L L +YL C ++ LF +P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+ W II NG AI + M+ ++PN+ T+ VL AC +E+ I +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
K +GLE + +VD + G +A++L + M + D W +M+ C
Sbjct: 134 HAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++ L C +++ G H +I G + D N L+ MY+ ++ A ++F
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M R +IVSW M+ Y + A+ L++ +L G ++P+ + +L +CS SG +
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFICLLSSCSHSGLV 530
Query: 122 DLGRLIHERITRE 134
GRL + ++R+
Sbjct: 531 MEGRLWFDAMSRD 543
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 338/669 (50%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +I G+ +H GL D+F G+ L+ MYA+ L DA ++FD MA ++
Sbjct: 153 VKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDC 212
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y + A+ L+ M G EPN + L + DL G +H
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASG-CEPNFATLACFLSVSATESDLFFGVQLHT 271
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
+ LE + + NTL+ MY KC L D + + ++ WN M+SG Q
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLD----DGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 188 -----VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ FC K G + VTL SL+ + G L + I+
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY-----------IVR 376
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
C F +SALVD+Y C + A+ ++D +S +V + ++MISGYVLN +
Sbjct: 377 NCVHMDVFLVSALVDIYFKCRAVRMAQSVYD------SSKAIDVVIGSTMISGYVLNGMS 430
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EA+ + ++ G+ ++ S L AC ++ + ++H + + YE V S
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAM--KLGQELHSYALKNAYEGRCYVES 488
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+YA+ G + + +F ++ KD V W+ +I ++G A LFR+M
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ ISSVL C+ L ++ GK++H +K + ++LIDMY KCG ++ +F
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ MPE++ VSW II G G KE+++ + M + K + +TFL ++SAC HAG V+
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E +F M EY + P +EH+ CMVDL +AG D A +LI +MPFKPD IW ++L A
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H N +L I +++L P + YV++SN+ A G WD +SKVR+ K +K
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIP 788
Query: 660 GMSWIEVSS 668
G SW++V++
Sbjct: 789 GYSWVDVNN 797
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C ++K G+ LH +K + + L+ MYA L+ +H +F +++
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W +M++++ N P A+ L+ M G V+ + S+VL AC+ + G+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-VKYSNVTISSVLSACASLPAIYYGK 570
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGNVA 176
IH + + + D + L+DMY KCG+L ++F+ N ++YG
Sbjct: 571 EIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYG 630
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L +S + + + GF+ + VT +L+ G++ +GL LF M E ++
Sbjct: 631 LVKESVSLLRHMQ----EEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ F C +VD+YS L +A +L
Sbjct: 687 ---MEHFAC-------MVDLYSRAGKLDKAMELI 710
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 10/284 (3%)
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L+ C++ + + LQVHG VT+G + D + + L+ +Y + A+ +F L
Sbjct: 44 AVLRGCVSPSHLS--LGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 383 PKKDV---VAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQFIISSVLKVCSCLAS 437
P+ + W+ LI G T G A L + M S + V+K C+ L +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+ G+ VH G + + ++LI MY G + D +F M ERD V W ++ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
+ G A+ F +M S +PN T LS + + T + +YGLE
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT-LAVKYGLES 280
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ +V + + C DD +L MP + D W M+ C
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 361/689 (52%), Gaps = 62/689 (8%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR + + C RS+ QG+ +H I+ D N++LSMY SL DA ++FD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +N+VS+T+++T Y+ N + AIRLY ML+ V P+ F + +++KAC+ S D+
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVG 185
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG----NVALW 178
LG+ +H ++ + + + N L+ MYV+ F+Q S+ + YG ++ W
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVR--------FNQMSDASRVFYGIPMKDLISW 237
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM----------YL------KCGEI---DD 219
+S+++G Q+ GFE E L+ L +M Y+ C + D
Sbjct: 238 SSIIAGFSQL-------GFEFE--ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
G + + ++ I GC +L DMY+ C L AR++FDQ
Sbjct: 289 GSQIHGLCIKSELAG--NAIAGC---------SLCDMYARCGFLNSARRVFDQIER---- 333
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ A WN +I+G N +EA+++ S + SSG D+ + S L A + +
Sbjct: 334 --PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ-- 389
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCT 398
+Q+H I+ G+ D V ++L+ +Y ++ LF D V+W+ ++ C
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+H LF+ M+ S + + + ++L+ C ++SL+ G QVH + +K G E
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
LIDMY KCG + +F M RDVVSW+ +IVG Q+G +EA+ F+EM +
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PN +TF+GVL+AC H GLVEE ++ +M+ E+G+ P EH C+VDLL +AG ++A
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
E+ I EM +PD +W ++L AC+T N L AE +L P + + +V+L +++A+
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Query: 639 GMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
G W++ + +R + KK KK G SWIE+
Sbjct: 690 GNWENAALLRSSMKKHDVKKIPGQSWIEI 718
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 149/620 (24%), Positives = 258/620 (41%), Gaps = 144/620 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + GK LH ++IK S + N L++MY F ++DA ++F + K++
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW++++ ++ A+ ML +G PN +++ + LKACS D G IH
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY-----SNW-------AASAYGN- 174
+ +L + + +L DMY +CG L R++FDQ ++W A + Y +
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 175 -VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
V++++ M LS G Q+H++ +K GF + SL+
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 210 MYLKCGEIDDGLALF-NFMPERDVVSWTGIIVGCF------------------ECS---- 246
MY C ++ LF +F D VSW I+ C EC
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 247 ----------------------CFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
C++L + L+DMY+ C L +AR++FD
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ +V W+++I GY + EEA+ L + S+G+ + TF L AC
Sbjct: 535 DN------RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC---- 584
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S L GL + + + ++ + S ++DL AR G + A + + D
Sbjct: 585 ---SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD 641
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VV W L+ C G LA +++ ++ F ++ + +CS AS G +A
Sbjct: 642 VVVWKTLLSACKTQGNVHLAQKAAENILK----IDPFNSTAHVLLCSMHAS--SGNWENA 695
Query: 447 FCVKRGFEKED---ITLTSLIDMYLKCGEIDDGLALF----KFMPERDVVS------WTG 493
++ +K D I S I EI+D + +F F PERD + W+
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWI-------EIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQ 748
Query: 494 IIVGCGQNGRAKEAIAYFQE 513
++ C N + K+ + + E
Sbjct: 749 MLDEC--NPQHKKRLQFIHE 766
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 346/672 (51%), Gaps = 41/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C Q +S+ + K +H +K + D + L +Y + A +LFDE+ ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W ++ AY N + AI LY+ ML G V PN + Y VLKACS ++ G IH
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
LE D + L+D Y KCG L ++LF S + +V WN+M++G
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS------HRDVVAWNAMIAGC-S 186
Query: 188 VHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++ C + G T+ ++ + + G AL + R + G
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN--G 244
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++VG + L+DMY+ C L ARK+FD N W++MI GYV +
Sbjct: 245 VVVG---------TGLLDMYAKCQCLLYARKIFD------VMGVRNEVSWSAMIGGYVAS 289
Query: 298 EQNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ +EA+ L I M T S L+AC L + + ++H I+ G LD
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR--GRKLHCYIIKLGSVLDI 347
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
++G+ L+ +YA+ G + A+ F + KD V++S ++ GC ++G ++A +FR M S
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
D + + VL CS LA+L+ G H + + RGF + + +LIDMY KCG+I
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F M D+VSW +I+G G +G EA+ F +++ LKP++ITF+ +LS+C H+
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E F +M ++ + P +EH CMVD+LG+AG D+A I MPF+PD IW++
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L AC H N +L +++++ + PE +V+LSN+Y+ G WD + +R K G
Sbjct: 588 LLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Query: 657 KK-AGMSWIEVS 667
KK G SWIE++
Sbjct: 648 KKIPGCSWIEIN 659
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 173/442 (39%), Gaps = 106/442 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L G+ +++ GK+LH ++ + G LL MYA L A K+FD M
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW+ M+ Y ++ A+ L++ M+ +++P +VL+AC+ DL GR
Sbjct: 273 VRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAY----------G 173
+H I + D +L NTLL MY KCG + + FD+ + + ++ G
Sbjct: 333 KLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNG 392
Query: 174 NVALWNSM-----LSG-----------------------GKQVHAFCVKRGFEKEDVTLT 205
N A+ S+ LSG G H + + RGF + +
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LIDMY KCG+I +FN M D+VSW +I+G
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIG------------------------ 488
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
Y ++ EA+ L + + G+ D TF
Sbjct: 489 ----------------------------YGIHGLGMEALGLFHDLLALGLKPDDITFICL 520
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELF 379
L +C S L + G + D+ + ++D+ R G + A
Sbjct: 521 LSSC-------SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573
Query: 380 HRLP-KKDVVAWSGLIMGCTKH 400
+P + DV WS L+ C H
Sbjct: 574 RNMPFEPDVRIWSALLSACRIH 595
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L+ C SL K++H +K + L L +YL C ++ LF +P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+ W II NG AI + M+ ++PN+ T+ VL AC +E+ I +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
K +GLE + +VD + G +A++L + M + D W +M+ C
Sbjct: 134 HAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++ L C +++ G H +I G + D N L+ MY+ ++ A ++F
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M R +IVSW M+ Y + A+ L++ +L G ++P+ + +L +CS SG +
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFICLLSSCSHSGLV 530
Query: 122 DLGRLIHERITRE 134
GRL + ++R+
Sbjct: 531 MEGRLWFDAMSRD 543
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 353/675 (52%), Gaps = 43/675 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V + C RS+K GK +H I+K D+ N++L+MY SL DA K FD M
Sbjct: 84 VNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQL 143
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VSWT M++ Y+ N + N AI +Y ML G P+ + +++KAC ++GD+DLG
Sbjct: 144 RSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYF-PDQLTFGSIIKACCIAGDIDLGGQ 202
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG 184
+H + + ++ + N L+ MY K G + +F S ++ W SM++G
Sbjct: 203 LHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIST------KDLISWASMITG 256
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN--FMPERDVV--SWTGIIV 240
Q+ G+E E + L DM+ + G +F F R ++ + I
Sbjct: 257 FTQL-------GYEIEALYL--FRDMFRQ-GVYQPNEFIFGSVFSACRSLLKPEFGRQIQ 306
Query: 241 GCFECSCFTLS-------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
G C+ F L +L DMY+ L A++ F Q S ++ WN++I+
Sbjct: 307 GM--CAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES------PDLVSWNAIIAA 358
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
+ N EAI + G+ D TF + L AC + + N +Q+H I+ G +
Sbjct: 359 -LANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQ--GMQIHSYIIKMGLD 415
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRD 412
V ++L+ +Y + N+ A +F + + ++V+W+ ++ C++H A+ LF+
Sbjct: 416 KVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKL 475
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ S + I+++L C+ L SL G QVH F VK G + LIDMY KCG
Sbjct: 476 MLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGL 535
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ +F D+VSW+ +IVG Q G +EA+ F+ M ++PNE+T+LGVLSA
Sbjct: 536 LKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSA 595
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H GLVEE W ++ +M+ E G+ P EH CMVDLL +AGC +AE I + F PD T
Sbjct: 596 CSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDIT 655
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L +C+TH N + AE +L P + + V+LSN++A+ G W ++++R K
Sbjct: 656 MWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMK 715
Query: 653 KLG-EKKAGMSWIEV 666
++G +K G SWIEV
Sbjct: 716 QMGVQKVPGQSWIEV 730
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 174/353 (49%), Gaps = 7/353 (1%)
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAI-TLLSHIHSSGMCIDSYTFTSALKACINLL 333
S+ + +G NS I+ + EA+ T H+ +S + ++ T+ + + AC N+
Sbjct: 35 SYDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVR 94
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ ++ ++H I+ S + D ++ ++++++Y + G++K A + F + + VV+W+ +
Sbjct: 95 SL--KYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIM 152
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G +++G + A +++ M+ S +Q S++K C + G Q+H +K G+
Sbjct: 153 ISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGY 212
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ I +LI MY K G+I +F + +D++SW +I G Q G EA+ F++
Sbjct: 213 DHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRD 272
Query: 514 MI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M Q +PNE F V SACR + L E M ++GL ++ + D+ +
Sbjct: 273 MFRQGVYQPNEFIFGSVFSACR-SLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKF 331
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL-LATSPED 624
G A++ ++ PD W +++ A + + + + + + P+D
Sbjct: 332 GFLPSAKRAFYQIE-SPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDD 383
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + S++ G +HC +K GL D+ N L+ MYA L A +FD
Sbjct: 488 ITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQ 547
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+IVSW++++ Y A+ L+ M G V+PN Y VL ACS G ++ G
Sbjct: 548 NPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLG-VQPNEVTYLGVLSACSHIGLVEEG 605
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 239/782 (30%), Positives = 369/782 (47%), Gaps = 131/782 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C RR++K GK H +I G + +F N L+ MY +L A+K+F+EM +++I
Sbjct: 31 FQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDI 90
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP----------NGFMYSAV-------- 111
VSW TMV R A ++N M +G V NG + ++
Sbjct: 91 VSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRD 150
Query: 112 -------------LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
LK CSL D LG IH + +YD V + L+DMY KC SL
Sbjct: 151 LGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLED 210
Query: 159 KLFDQYS-----NW---------------------------------AASAYGNVALWNS 180
L D +S NW + S Y +V +
Sbjct: 211 SL-DVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA 269
Query: 181 MLSG---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
LS G Q+H +K F + + T+ +DMY KC + D LF+ +P+ ++ S+
Sbjct: 270 GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNA 329
Query: 238 IIVG--------------------CFECSCFTLS------ALVDMYSN------------ 259
+I+G F +LS A++ +S
Sbjct: 330 MIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSN 389
Query: 260 -CNVLCEARKLFDQYSSWAA--SAYG--------NVALWNSMISGYVLNEQNEEAITLLS 308
+ +C A + D Y A A G + WN++I+ EQNE LS
Sbjct: 390 LSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITAC---EQNESEGKTLS 446
Query: 309 HIHS---SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
H + S M D +T+ S LKAC F++ ++VHG I+ SG L VGS L+D+
Sbjct: 447 HFGAMLRSKMEPDEFTYGSVLKACAGQRAFSN--GMEVHGRIIKSGMGLKMFVGSALVDM 504
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++ G ++ A ++ +RL ++ +V+W+ +I G + + + F M+ + + F
Sbjct: 505 YSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTY 564
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
++VL C+ LA++ GKQ+HA +K + ++L+DMY KCG + D L +F+ P+
Sbjct: 565 ATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPK 624
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RD V+W +I G +G +EA+ F+ M+ +KPN TF+ VL AC H G ++
Sbjct: 625 RDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFY 684
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M Y LEP LEHY CMVD+LG++G ++A +LI +MPF+ D IW ++L C+
Sbjct: 685 FQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQG 744
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
N ++ A LL PED S Y +LSN+YA GMW +SK+R+ + +K+ G SWI
Sbjct: 745 NVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWI 804
Query: 665 EV 666
EV
Sbjct: 805 EV 806
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/619 (22%), Positives = 251/619 (40%), Gaps = 139/619 (22%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
+S + + CS L G+ H + + N L+ MYVKC +L K+F++
Sbjct: 27 FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86
Query: 166 -----NW---------------------AASAYGNVALWNSMLSG--------------- 184
+W + +G+V WNS++SG
Sbjct: 87 QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
G Q+H V+ GF+ + VT ++L+DMY KC
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN 206
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------------------ 245
++D L +F+ +P+++ +SW+ I GC +
Sbjct: 207 SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFR 266
Query: 246 SCFTLS-------------------------ALVDMYSNCNVLCEARKLFDQYSSWAASA 280
SC LS A +DMY+ C+ + +A KLF
Sbjct: 267 SCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH---- 322
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
N+ +N+MI GY NEQ +A L + + D + + AL A + +
Sbjct: 323 --NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE--G 378
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
LQ+HGL + S + V + ++D+Y + G + A LF + +D V+W+ +I C ++
Sbjct: 379 LQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQN 438
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
F M+ S + ++F SVLK C+ + G +VH +K G +
Sbjct: 439 ESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG 498
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
++L+DMY KCG +++ + + E+ +VSW II G +++++ +F M++ ++
Sbjct: 499 SALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
P+ T+ VL C + V I M K E + ++ +VD+ + G D+
Sbjct: 559 PDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITS--TLVDMYSKCGNMHDSL 616
Query: 580 QLIAEMPFKPDKTIWASML 598
+ + P K D W +M+
Sbjct: 617 LMFRKAP-KRDSVTWNAMI 634
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 44/254 (17%)
Query: 321 TFTSALKACINLLNFNSRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
TF+ + C N R AL + H ++ SG+ V + LI +Y + ++ A
Sbjct: 26 TFSHIFQECSN------RRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAY 79
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN---------------SNQDVN 421
++F +P++D+V+W+ ++ GC G LA +F M + N D+
Sbjct: 80 KVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQ 139
Query: 422 QFI-----------------ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
+ I ++ LK+CS L G Q+H V+ GF+ + +T ++L+
Sbjct: 140 KSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALV 199
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY KC ++D L +F +P+++ +SW+ I GC QN + + F+EM + + ++
Sbjct: 200 DMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQS 259
Query: 525 TFLGVLSACRHAGL 538
T+ V +C AGL
Sbjct: 260 TYASVFRSC--AGL 271
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 213/701 (30%), Positives = 334/701 (47%), Gaps = 106/701 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C RS++ GK +H ++K D+ N++L+MY SL DA K+FD M +N+VSW
Sbjct: 73 CSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSW 132
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ Y+ N + A+ Y ML+ G V P+ F + +++KACS GD+ LGR +H +
Sbjct: 133 TSVIAGYSQNGQGGNALEFYFQMLQSG-VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------- 184
+ + + N L+ MY K +L D +S A ++ W SM++G
Sbjct: 192 KSEFGAHIIAQNALISMYTK-SNLIIDALDVFSRMATR---DLISWGSMIAGFSQLGYEL 247
Query: 185 -------------------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
G+Q+H +K G ++ SL
Sbjct: 248 EALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
DMY KCG + +F + D+V+W II G
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAG-------------------------- 341
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
AYG A +EAI S + G+ D T S L
Sbjct: 342 -----------FAYGGDA---------------KEAIAFFSQMRHQGLIPDEITVRSLLC 375
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
AC + +QVHG I G +LD V + L+ +YA+ ++ A+ F + D
Sbjct: 376 ACTSPSELYQ--GMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ ++ C +H + L + M S + +++VL + S+ G QVH
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHC 493
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ +K G + LID+Y KCG + +F M DVVSW+ +I+G Q G +E
Sbjct: 494 YALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEE 553
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F+ M + +KPN +TF+GVL+AC H GLVEE W ++ +M+ E+G+ P EH CMV
Sbjct: 554 ALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMV 613
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLL +AGC ++AE I +M F PD +W ++L AC+TH N + AE +L P + +
Sbjct: 614 DLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSA 673
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+V+L N+YA+ G W+ ++++R K+ G +K G SWIEV
Sbjct: 674 AHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEV 714
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 186/495 (37%), Gaps = 116/495 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C I G+ LH ++K I N L+SMY + DA +F MA +++
Sbjct: 171 IKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDL 230
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+ ++ A+ + ML G PN F++ +V ACS + GR +H
Sbjct: 231 ISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHG 290
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----W----AASAYGN---- 174
+ L D +L DMY KCG L+ R +F Q W A AYG
Sbjct: 291 MSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKE 350
Query: 175 -VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+A ++ M L G QVH + K G + + +L+
Sbjct: 351 AIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLT 410
Query: 210 MYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCF------------------------- 243
MY KC E+ D + F M D+VSW I+ C
Sbjct: 411 MYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYI 470
Query: 244 -------------------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
+ C+ L + L+D+Y+ C L A K+FD
Sbjct: 471 TLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM 530
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ +V W+S+I GY EEA+ L + + + TF L AC
Sbjct: 531 IN------PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC---- 580
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S L G + E ++ + S ++DL AR G + A H++ D
Sbjct: 581 ---SHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPD 637
Query: 387 VVAWSGLIMGCTKHG 401
+V W L+ C HG
Sbjct: 638 IVVWKTLLAACKTHG 652
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 16/273 (5%)
Query: 288 NSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
N I+ + EAI + +G C+ T+ + AC L + ++H
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEH--GKKIHDH 88
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
++ S D + ++++++Y + ++K A ++F +P+++VV+W+ +I G +++G A
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+ M+ S +QF S++K CS L + G+Q+HA +K F I +LI M
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEIT 525
Y K I D L +F M RD++SW +I G Q G EA+ YF+EM+ Q PNE
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFI 268
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
F V SAC + ++PEYG + H
Sbjct: 269 FGSVFSACS------------SLLQPEYGRQLH 289
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/672 (32%), Positives = 343/672 (51%), Gaps = 42/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG ++ K +H G D+F G++L+ +Y D ++DA LFDE+ ++
Sbjct: 184 IKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDC 243
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W M+ Y N N A+ + M V+PN + +L C+ G + G +H
Sbjct: 244 ILWNVMLNGYVKNGDFNSALGTFQEMRN-SCVKPNSVSFVCLLSVCATRGIVRAGIQLHG 302
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ R E D + NT++ MY KCG+L RK+FD + WN +++G
Sbjct: 303 LVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQ------TDTVTWNGLIAG--- 353
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
V+ GF E V +L + G D + +F+P V +G + C E
Sbjct: 354 ----YVQNGFTDEAV---ALFKAMVTSGVKLDSITFASFLPS---VLKSGSLKYCKEVHS 403
Query: 248 FTL-----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + SALVD+Y + A K F Q + +VA+ +MISGYVL
Sbjct: 404 YIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ------NTLVDVAVCTAMISGYVL 457
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N N EA+ L + GM + T S L AC L + + ++H I+ G E
Sbjct: 458 NGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL--KLGKELHCDILKKGLENVC 515
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VGS++ +YA+ G + A + F R+P KD V W+ +I+ +++G LA LFR M S
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTS 575
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ +S+ L C+ +L GK++H F V+ F + ++LIDMY KCG++
Sbjct: 576 GTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALA 635
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
++F M ++ VSW II G +GR +E + F EM+++ ++P+ +TFL ++SAC HA
Sbjct: 636 RSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHA 695
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV+E F M EYG+ +EH+ CMVDL G+AG +A I MPF PD W S
Sbjct: 696 GLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGS 755
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L AC H N +L + ++ L+ P + YV+LSNV+A G W+S+ KVR K+ G
Sbjct: 756 LLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGV 815
Query: 656 EKKAGMSWIEVS 667
+K G SWI+V+
Sbjct: 816 QKIPGYSWIDVN 827
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 240/560 (42%), Gaps = 107/560 (19%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+Q + +H +++ G++ + G+ +L MY S D LF + + W ++ +
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ ++A+ + ML +V P+ + + V+KAC ++ L +++HE D
Sbjct: 153 SMLGCFDFALMFFFRMLG-SNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMD 211
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
+ ++L+ +Y G + + LFD+ + LWN ML+G
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDEL------PVRDCILWNVMLNGYVKNGDFNSALGT 265
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
G Q+H ++ GFE + ++I MY K
Sbjct: 266 FQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSK 325
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
CG + D +F+ MP+ D V+W G+I G
Sbjct: 326 CGNLFDARKIFDIMPQTDTVTWNGLIAG-------------------------------- 353
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
YV N +EA+ L + +SG+ +DS TF S L + +
Sbjct: 354 --------------------YVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK-- 391
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ + ++ +VH IV G D + S L+D+Y + G+V+ A + F + DV + +
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G +GLN A LFR +I N ++SVL C+ LASL+ GK++H +K+G
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL 511
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
E +S+ MY K G +D F+ MP +D V W +IV QNG+ + AI F++
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQ 571
Query: 514 MIQSRLKPNEITFLGVLSAC 533
M S K + ++ LSAC
Sbjct: 572 MGTSGTKFDSVSLSATLSAC 591
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 2/257 (0%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H ++ G +GS ++ +Y + K LF RL + W+ LI G + G
Sbjct: 97 QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
A + F M+ SN +++ V+K C L ++ K VH GF + +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SLI +Y G I D LF +P RD + W ++ G +NG A+ FQEM S +KP
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N ++F+ +LS C G+V A + G E ++ + + G DA ++
Sbjct: 277 NSVSFVCLLSVCATRGIV-RAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 582 IAEMPFKPDKTIWASML 598
MP + D W ++
Sbjct: 336 FDIMP-QTDTVTWNGLI 351
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 145/335 (43%), Gaps = 46/335 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C S+K GK LHC I+K GL G+++ MYA L+ A++ F M
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP 542
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V W M+ +++ N +P AI L+ M G+ + + SA L AC+ L G+
Sbjct: 543 VKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT-KFDSVSLSATLSACANYPALYYGK 601
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+H + R DT + +TL+DMY KCG +L R +FD +W N WNS+++
Sbjct: 602 ELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMM-DWK-----NEVSWNSIIA 655
Query: 184 G----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ V+ G + + VT ++ G +D+G+ F M E
Sbjct: 656 AYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEE---- 711
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS---------W-----AASA 280
GI +C +VD+Y L EA FD S W A
Sbjct: 712 -YGICARMEHFAC-----MVDLYGRAGRLHEA---FDTIKSMPFTPDAGTWGSLLGACRL 762
Query: 281 YGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GNV L V L+ N LLS++H+
Sbjct: 763 HGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGA 797
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/679 (32%), Positives = 346/679 (50%), Gaps = 50/679 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C R ++H I++ S +F N LL+ Y A +L DEM R N
Sbjct: 24 LRSCSAPR---HAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNA 78
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ ++ AY+ +P ++ + V + F Y+A L ACS +G L G+ +H
Sbjct: 79 VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
E + + N+L+ MY +CG + R++FD AA +V+ WN+++SG
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFD-----AADERDDVS-WNALVSGYVR 192
Query: 185 -GKQ-----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG- 237
G Q V A + G L S+I C DD P D+ +
Sbjct: 193 AGAQDDMLRVFAMMRRSGIGLNSFALGSVIKC---CAGSDD--------PVMDIAAAVHG 241
Query: 238 -IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
++ F+ F SA+V MY+ L EA LF NV ++N+MI+G
Sbjct: 242 CVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLD------PNVVVFNAMIAGLCR 295
Query: 297 NEQN------EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+E EA++L S + S GM +TF+S ++AC NL + F Q+HG ++
Sbjct: 296 DEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRAC-NLAG-DIEFGKQIHGQVLKH 353
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
++ D +GS LIDLY G ++ F +PK+DVV W+ +I GC ++ L A LF
Sbjct: 354 CFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLF 413
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+++ + + F ISSV+ C+ LA R G+Q+ F K GF + S I MY +
Sbjct: 414 HELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARS 473
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G++ + F+ M D+VSW+ +I Q+G A++A+ +F EM+ +++ PNEITFLGVL
Sbjct: 474 GDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVL 533
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
+AC H GLV+E + +MK EY L P ++H C+VDLLG+AG DAE I + F +
Sbjct: 534 TACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDE 593
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
IW S+L +C H + + ++A++++ P + YV L N+Y G SK+R
Sbjct: 594 PVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDV 653
Query: 651 GKKLGEKK-AGMSWIEVSS 668
K+ G KK G+SWIE+ S
Sbjct: 654 MKERGVKKEPGLSWIELRS 672
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 15/243 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + C + G+ + C K G + GN+ + MYA ++ A + F EM
Sbjct: 428 ISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEME 487
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+IVSW+ +++++ + A+R +N M++ V PN + VL ACS G +D G
Sbjct: 488 SHDIVSWSAVISSHAQHGCARDALRFFNEMVD-AKVVPNEITFLGVLTACSHGGLVDEGL 546
Query: 126 LIHERITREKLEYDTVLMNT-LLDMYVKCGSLT-RKLFDQYSNWAASAYGNVALWNSMLS 183
+E + E T+ T ++D+ + G L + F + S + + +W S+L+
Sbjct: 547 KYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIF----HDEPVIWRSLLA 602
Query: 184 GGK--------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
+ Q+ A + + +L ++YL GE+ + + M ER V
Sbjct: 603 SCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKE 662
Query: 236 TGI 238
G+
Sbjct: 663 PGL 665
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 219/711 (30%), Positives = 364/711 (51%), Gaps = 99/711 (13%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+ + G ++H RII+ GL NL Y+ A KL + + ++VSW+ ++
Sbjct: 64 KDVSSGMAIHARIIRLGLLGLRNRLVNL---YSKCQCFRVARKLVIDSSEPDLVSWSALI 120
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE-----RI 131
+ Y N R A+ Y M G+ + N F +S+VLK CSL+ +L+LG+ IH +
Sbjct: 121 SGYVQNGRGEEALLTYYEMYLLGA-KGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEM 179
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
+ + ++T+L+ C L + + G +VH +
Sbjct: 180 ISTGISPNEFSLSTVLN---ACAGLEDENY-----------------------GMKVHGY 213
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF-------- 243
+K G++ + + +L+DMY K G + +A+F +P+ D+VSW +I GC
Sbjct: 214 LIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLA 273
Query: 244 ------------ECSCFTLSA-----------------------------------LVDM 256
S FTLS+ L+DM
Sbjct: 274 LKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDM 333
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
YS C +L +AR +FD +V +WNS+ISGY + EA++L ++++ G+
Sbjct: 334 YSKCGLLQDARMVFDLMPX------KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+ T ++ LK+ + + F QVH + + SGY+ D V ++L+D Y + ++ A
Sbjct: 388 FNQTTLSTILKSTAG--SQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAA 445
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
++F P +D+VA++ +I +++GL A ++ M + + + FI SS+ C+ L+
Sbjct: 446 KVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLS 505
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ +GKQ+H +K G + SL++MY KCG IDD +F + R +VSW+ +I
Sbjct: 506 AYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIG 565
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G ++A+ F +M+++ + PN IT + VLSAC HAGLV EA F M+ +G+
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P EHY CMVD+LG+ G D+A L+ EMPF+ +W ++L A H N +L AE
Sbjct: 626 PTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEM 685
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK-LGEKKAGMSWIEV 666
LL PE +++L+N+YA+ GMWD+++KVR++ K L +K+ GMSWIE+
Sbjct: 686 LLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIEL 736
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 230/561 (40%), Gaps = 109/561 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C G +H +IK G D F+ N LL MYA A +F E+ + +I
Sbjct: 195 LNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDI 254
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ +++ + A++L M Y V P+ F S+ LKAC+ G + LGR +H
Sbjct: 255 VSWNAVIAGCVLHEKNDLALKLLGKMGSY-RVAPSMFTLSSALKACAAIGLVKLGRQLHS 313
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + +E D+ + L+DMY KCG L R +FD +V +WNS++SG
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX------KDVIVWNSIISGYSN 367
Query: 185 ----------------------------------GKQVHAFC-------VKRGFEKEDVT 203
G Q + FC +K G++ +
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
SL+D Y KC ++D +F P D+V++T +I
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMIT----------------------- 464
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A S YG EEA+ + + + D++ F+
Sbjct: 465 -------------AYSQYG----------------LGEEALKMYLRMQDRDIKPDAFIFS 495
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S AC NL + + VH ++ G D G++L+++YA+ G++ A +F+ +
Sbjct: 496 SLFNACANLSAYEQGKQIHVH--VLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS 553
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ +V+WS +I G +HG A LF M+ + N + SVL C+ + ++
Sbjct: 554 WRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARR 613
Query: 444 VHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
K G ++D+ + G +D+ + L K MP + + G ++G +
Sbjct: 614 FFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIH 673
Query: 503 RAKEAIAYFQEMIQSRLKPNE 523
+ E + EM+ + L+P +
Sbjct: 674 KNIELGRHAAEMLLT-LEPEK 693
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 41/273 (15%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C +K G+ LH ++K + D F G L+ MY+ L DA +FD M K+
Sbjct: 295 ALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKD 354
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++ W ++++ Y++ A+ L+ +M + G +E N S +LK+ + S +H
Sbjct: 355 VIVWNSIISGYSNCGYDIEAMSLFTNMYKEG-LEFNQTTLSTILKSTAGSQANGFCEQVH 413
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD--------QYSNW--AASAYG--- 173
+ +YD + N+LLD Y KC L K+F+ Y++ A S YG
Sbjct: 414 TISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGE 473
Query: 174 ----------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
+ +++S+ + GKQ+H +K G + SL+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+MY KCG IDD +FN + R +VSW+ +I G
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGG 566
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 223/686 (32%), Positives = 353/686 (51%), Gaps = 49/686 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + AL H + I G +H +IIK G DIF+ NNL+ MY L K+F
Sbjct: 75 DPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVF 134
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS----- 116
EM KN+VSWT +V+ N + +Y M+ G V PN F V KAC+
Sbjct: 135 GEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLV-PNEFALGCVTKACAALGGC 193
Query: 117 -LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYG 173
+ G+L+ GR IH I + ++ + T +MN+L+DMY K G K+FD+ +
Sbjct: 194 LVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQD------K 247
Query: 174 NVALWNSMLSG------GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
++ WN++ +G +++ F K G + VT + L CGE D ++
Sbjct: 248 DIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRF---CGEALDLVSGL 304
Query: 225 NF--MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
F + R +S + S+L++M+S C + A +FD ++ +
Sbjct: 305 QFHCLAFRFGISDEASVT----------SSLINMFSRCGAMRMACLVFD------SAPFK 348
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
++ N MISGY LN N EA+ L +++ G+ D TF+SAL+AC N + Q
Sbjct: 349 SIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFR--TENQKLGRQ 406
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+HG IV SG+ V S+L+ Y G + + E F+ + + D+V+W +I G
Sbjct: 407 MHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGY 466
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+S A L + + ++FI S+ C+ +A+ R+ K VH+ VK G+E ++
Sbjct: 467 SSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASA 526
Query: 463 LIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+ID Y KCG+I++ +F RDV+ + +++ +G +EA+ F++M + L+P
Sbjct: 527 VIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEP 586
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
++ TF+ V+SAC H GLVE+ F SM +YG++P ++Y C+VDL + G +DA+ +
Sbjct: 587 SQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHI 646
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I MPF P IW S+L C H N +L A++LL PE+ + YV+LS VY+ G W
Sbjct: 647 IETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSW 706
Query: 642 DSLSKVRKAGKKLGE-KKAGMSWIEV 666
+KVRK + G K G SWIE+
Sbjct: 707 SDAAKVRKGMIERGLWKDPGCSWIEI 732
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 228/733 (31%), Positives = 350/733 (47%), Gaps = 93/733 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C R+++ GK H R+I +F N L+ MY + L A K+FD M +++
Sbjct: 49 FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDT 108
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS--VEPNGF------------MYSAVLKAC 115
VSW M+ Y A +L++ M G VE F ++ VLK+C
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSC 168
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV 175
S D G IH + + D V + LLDMY KC L G +
Sbjct: 169 SSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDL-----------RGGL 217
Query: 176 ALWNSMLSGGK---QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD-GLALFNFMPER- 230
L+ M G Q+H +K F + V T+ +DMY+KC + D LFN +P
Sbjct: 218 ELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHN 277
Query: 231 ----------------------------------DVVSWTGIIVGCF------------- 243
D VS +G C
Sbjct: 278 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHG 337
Query: 244 -------ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + +A++DMY C L EA +F++ S A + WN++I+ +
Sbjct: 338 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS------WNAIIAAHEQ 391
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N E+ ++L + SGM D +T+ S LKAC N +++H I+ S LD
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNC--GMEIHNRIIKSRMGLDS 449
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VG LID+Y++ G ++ A +L RL ++ VV+W+ +I G + + A F M+
Sbjct: 450 FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 509
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
D + F +++L C+ L ++ GKQ+HA +K+ + + ++L+DMY KCG + D
Sbjct: 510 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 569
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F+ P RD V+W ++ G Q+G +EA+ F+ M +KPN TFL VL AC H
Sbjct: 570 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 629
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLVE+ F SM YGL+P LEHY C+VD++G++G A +LI MPF+ D IW +
Sbjct: 630 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 689
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L C+ H N ++ A +L PED + YV+LSN+YA GMW+ ++K+RK + G
Sbjct: 690 LLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 749
Query: 656 EKKAGMSWIEVSS 668
+K+ G SWIE+ S
Sbjct: 750 KKEPGCSWIEIKS 762
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 175/440 (39%), Gaps = 107/440 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A R C + +G +H +K +I N +L MY +L +A +F+EM ++
Sbjct: 319 AXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRD 378
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ A+ N + L+ ML+ G +EP+ F Y +VLKAC+ L+ G IH
Sbjct: 379 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG-MEPDEFTYGSVLKACAGWQALNCGMEIH 437
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
RI + ++ D+ + L+DMY KCG + + KL D+ A V WN+++SG
Sbjct: 438 NRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRL------AEQTVVSWNAIISGFS 491
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GKQ+HA +K+ + +
Sbjct: 492 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 551
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
++L+DMY KCG + D +F P RD V+W ++ G
Sbjct: 552 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG--------------------- 590
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
Y + EEA+ + ++ + + TF
Sbjct: 591 -------------------------------YAQHGLGEEALKIFEYMQLENVKPNHATF 619
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L+AC + + + H ++ G + S ++D+ R G V ALEL +
Sbjct: 620 LAVLRACGH-MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM 678
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
P + D V W L+ C HG
Sbjct: 679 PFEADAVIWRTLLSXCKIHG 698
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S + + CS +L GKQ HA + F+ LI MY+KC ++ +F MP
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMP 104
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+RD VSW ++ G G A F M
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAM 134
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 336/667 (50%), Gaps = 34/667 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ LH + KYG S + + N L+++Y+ + A K+F +M K+
Sbjct: 220 LSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ ++++ + A+ L+ M + ++P+ +++L AC+ +G L G +H
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKM-KRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
+ + + D ++ LLD+YV C + + + + NV LWN ML ++
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTA----HEMFLTAQTENVVLWNVMLVAFGKLD 394
Query: 189 ---HAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+F + R G T S++ G +D G + T +I
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH-----------TQVIK 443
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A + + +V W ++ISGY +
Sbjct: 444 TGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE------DDVVSWTALISGYAQHNLF 497
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + + G+ D+ F+SA+ AC + N Q+H SGY D +G+
Sbjct: 498 AEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQ--GRQIHAQSYVSGYSEDLSIGN 555
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LYAR G +K A F ++ KD ++W+GLI G + G A +F M + +
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ F S + + +A++++GKQ+HA +KRGF+ + +LI Y KCG I+D F
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MPE++ VSW +I G Q+G EA+ F++M Q PN +TF+GVLSAC H GLV
Sbjct: 676 CEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVT 735
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F SM E+GL P HY C+VDL+ +AG A + I EMP +PD TIW ++L A
Sbjct: 736 KGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSA 795
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A+ LL PED + YV+LSN+YA G WD + R+ + G KK
Sbjct: 796 CTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEP 855
Query: 660 GMSWIEV 666
G SWIEV
Sbjct: 856 GRSWIEV 862
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 160/683 (23%), Positives = 307/683 (44%), Gaps = 97/683 (14%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S+ + K LH +I+K G + N L+ +Y L+ K+F++M +++ SW
Sbjct: 20 CLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSW 79
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG-DLDLGRLIHERI 131
+++ + K N + L++ M+E +V P +++VL+ACS + IH RI
Sbjct: 80 DKIISGFMEKKMSNRVLDLFSCMIE-ENVSPTEISFASVLRACSGHRIGIRYAEQIHARI 138
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASAYGNVAL 177
L ++ N L+ +Y K G + RK+FD S ++ + Y A+
Sbjct: 139 ICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAI 198
Query: 178 -----------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMY 211
++S+LSG G+Q+HA K G E +L+ +Y
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLY 258
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSCFTLS 251
+ +F+ M +D VS+ +I G + C T++
Sbjct: 259 SRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVA 318
Query: 252 ALVDMYSNCNVLCEARK-------------------LFDQYSS----------WAASAYG 282
+L+ ++ LC+ + L D Y + + +
Sbjct: 319 SLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE 378
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV LWN M+ + + E+ + + G+ + +T+ S L+ C ++ + Q
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD--LGEQ 436
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H ++ +G++ + V S LID+YA+ G + +A + L + DVV+W+ LI G +H L
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-T 461
+ A F++M+N + SS + C+ + +L +G+Q+HA G+ ED+++
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGY-SEDLSIGN 555
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+ +Y +CG I + F+ + +D +SW G+I G Q+G ++A+ F +M +++L+
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ TF +SA + +++ I +M + G + +E ++ + G +DA +
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQIH-AMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674
Query: 582 IAEMPFKPDKTIWASMLKACETH 604
EMP K D + W +M+ H
Sbjct: 675 FCEMPEKNDVS-WNAMITGYSQH 696
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 226/539 (41%), Gaps = 97/539 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C ++ +G+ LH +IK G+S D+ LL +Y + + + AH++F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+N+V W M+ A+ + + R++ M G + PN F Y ++L+ C+ G L
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI-PNQFTYPSILRTCTSVGAL 431
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLF-DQYSNWAA--SAY 172
DLG IH ++ + +++ + + L+DMY K G L R L D +W A S Y
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491
Query: 173 G-----------------------NVALWNSM--------LSGGKQVHAFCVKRGFEKED 201
N+ +++ L+ G+Q+HA G+ ++
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+L+ +Y +CG I + F + +D +SW G+I G
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG-------------------- 591
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
F Q SGY E+A+ + + ++ + + +T
Sbjct: 592 --------FAQ-------------------SGYC-----EDALKVFAQMNRAKLEASFFT 619
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F SA+ A N+ N Q+H +I+ G++ D V + LI YA+ G+++ A F
Sbjct: 620 FGSAVSAAANIANIKQ--GKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCE 677
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P+K+ V+W+ +I G ++HG + A LF M + N VL CS + + +G
Sbjct: 678 MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKG 737
Query: 442 -KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + G + ++D+ + G + + MP E D W ++ C
Sbjct: 738 LGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSAC 796
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 8/280 (2%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+C + T+ L C+N + ++HG I+ G+ + ++ + L+D+Y LG++
Sbjct: 5 GICANCQTYIWLLDLCLNSGSLVE--CKKLHGKILKLGFGNESVLCNKLVDVYFALGDLD 62
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
+++F +P + V +W +I G + +++ LF MI N + +SVL+ CS
Sbjct: 63 GVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
Query: 434 C-LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+R +Q+HA + G I LI +Y K G I +F + +D VSW
Sbjct: 123 GHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWV 182
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G QNG +EAI F EM + + P F VLS C L + + ++ +
Sbjct: 183 AMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH-ALVFK 241
Query: 553 YGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPD 590
YG LE Y C +V L + F AE++ ++M K +
Sbjct: 242 YG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/673 (31%), Positives = 344/673 (51%), Gaps = 30/673 (4%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L+ CG G +H ++K+G D+ TG+ LL MYA L+D+ +F
Sbjct: 180 DRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVF 239
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E+ KN VSW+ M+ N R + L+ M G V + +Y+++ ++C+ L
Sbjct: 240 SELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVG-VGVSQSIYASLFRSCAALSAL 298
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWN 179
LG+ +H + D ++ LDMY KCG + +K+ + +Y + +
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGY 358
Query: 180 SMLSGGKQV---HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ G Q +K G +++TL+ ++ C I L R V
Sbjct: 359 ARSDRGFQALKSFQLLLKTGLGFDEITLSGALN---ACASIRGDL------EGRQV---H 406
Query: 237 GIIVGCFECSCFTLS-ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G+ V S ++ A++DMY C L EA LFD A + WN++I+
Sbjct: 407 GLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS------WNAIIAACE 460
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N EE + + + S M D +T+ S LKAC N+ +++H I+ SG D
Sbjct: 461 QNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNT--GMEIHTRIIKSGMGFD 518
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VG+ L+D+Y + G ++ A ++ R +K +V+W+ +I G + + A+ F M+
Sbjct: 519 SFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLE 578
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ + F ++VL C+ LA++ GKQ+HA +K+ + + ++L+DMY KCG + D
Sbjct: 579 MGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQD 638
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F+ P RD V+W ++ G +G +EA+ F+ M +KPN TF+ VL AC H
Sbjct: 639 SQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAH 698
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLV++ F M EYGL+P EHY CMVD+LG++G D+A L+ +MPF+ D IW
Sbjct: 699 MGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWR 758
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK--K 653
++L C+ H N ++ LL P+D S V+LSN+YA GMW ++S++RK + K
Sbjct: 759 NLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNK 818
Query: 654 LGEKKAGMSWIEV 666
L +K+ G SWIE+
Sbjct: 819 L-KKEPGCSWIEL 830
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
Y D + +++I YA G + A + F+ +P++DVV+W+ +I G ++G + +F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+M ++ ++ VLK C L G QVH VK GF+ + +T ++L+ MY KC
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+DD L++F +PE++ VSW+ +I GC QN R E + F+EM + ++ + +
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290
Query: 532 ACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+C + + + ++K +G + + +D+ + G DA+++++ MP
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVG--TATLDMYAKCGRMADAQKVLSSMP 344
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 37/209 (17%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK---------------- 469
S + + CS SL GKQ HA + GFE L+ MY+K
Sbjct: 53 SHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYL 112
Query: 470 ---------------CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
CGE+D F MPERDVVSW +I G QNG +++I F EM
Sbjct: 113 RDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEM 172
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEA--WTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+ + + + VL AC G +EE + ++G + + ++ + +
Sbjct: 173 GRCGVGFDRASLAVVLKAC---GALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
DD+ + +E+P K + W++M+ C
Sbjct: 230 KRLDDSLSVFSELPEK-NWVSWSAMIAGC 257
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 222/698 (31%), Positives = 352/698 (50%), Gaps = 80/698 (11%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R L+ R I K +H +II GL D F N L+++ + +++A +FD+
Sbjct: 50 REFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDK 109
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M KN+++W++MV+ Y+ A+ ++ + PN F+ ++V++AC+ G ++
Sbjct: 110 MPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK 169
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
G +H + R + D + +L+D Y K G++ R +FDQ S
Sbjct: 170 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS---------------- 213
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF------NFMPERDVVSW 235
EK VT T++I Y KCG L LF N +P+R VVS
Sbjct: 214 ----------------EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVS- 256
Query: 236 TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
++ C E ++ L+D Y+ CN + RKLFDQ
Sbjct: 257 -SVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM-- 313
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
N+ W +MISGY+ N + EA+ L ++ G D + TS L +C
Sbjct: 314 ----VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSC------ 363
Query: 336 NSRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
SR AL QVH + + E D V + LID+YA+ + A ++F + +++V++++
Sbjct: 364 GSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYN 423
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G + S A LF +M Q N+F ++++ S LASLR G+Q H VK
Sbjct: 424 AMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM 483
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G + +L+DMY KCG I++ +F RDVV W +I Q+G A+EA+ F
Sbjct: 484 GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF 543
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+EM++ ++PN +TF+ VLSAC HAG VE+ F SM P +G++P EHY C+V LLG+
Sbjct: 544 REMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGR 602
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
+G +A++ I +MP +P +W S+L AC N +L AE ++T P+D Y++L
Sbjct: 603 SGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILL 662
Query: 632 SNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEVSS 668
SN++A+ GMW + KVR + K+ G SWIEV++
Sbjct: 663 SNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNN 700
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 232/757 (30%), Positives = 363/757 (47%), Gaps = 110/757 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++++G H I + GL +D+F G L+ MY+ L A ++FD+M ++++
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDV 195
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA-CSLSGDLDLGRLIH 128
V+W M+ + ++ P A+ + M G VEP+ + C LS +++L R IH
Sbjct: 196 VAWNAMIAGLSQSEDPCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLS-NIELCRSIH 253
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN------------ 174
+ R ++ + + N L+D+Y KCG + R++FDQ + ++G
Sbjct: 254 GYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV 311
Query: 175 --VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+ L++ M L GK++H +++ + + + T L+
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------------- 241
MY KCGE + LF + RD+V+W+ II
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 242 --------CFECS---------CFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
C + S CFT+ +ALV MY+ C A F++
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
SS ++ WNS+I+GY AI + + S + D+ T + AC L
Sbjct: 492 SS------RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ + +HGLIV G+E D V + LID+YA+ G++ SA LF++ KD V W+
Sbjct: 546 DLDQ--GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++G A F M N N SVL + LA+ R G HA ++ G
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + SLIDMY KCG++D LF M +D VSW ++ G +G AIA F
Sbjct: 664 FLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFS 723
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M +S+++ + ++F+ VLSACRHAGLVEE IF SM +Y ++P LEHY CMVDLLG+A
Sbjct: 724 LMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRA 783
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G FD+ I MP +PD +W ++L +C H+N KL + + L+ P +P+ +V+LS
Sbjct: 784 GLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLS 843
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
++YA G W K R LG KK G SW+E+ +
Sbjct: 844 SIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 176/678 (25%), Positives = 283/678 (41%), Gaps = 110/678 (16%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +II G + +L+++Y+ F + A +FD + + W +M+ AYT +K+
Sbjct: 51 IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
N A+ +Y M+E G +EP+ + ++ VLKAC+ + +L G H I R LE D +
Sbjct: 110 YNEALEMYYCMVEKG-LEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ--------------- 187
L+DMY K G L R++FD+ +V WN+M++G Q
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPK------RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQ 222
Query: 188 -----------------------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
+H + +R F LID+Y KCG++D
Sbjct: 223 LVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVD 280
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFT-LSALVDMYSNCNV--------------- 262
+F+ M ++D VSW ++ G CF + L D NV
Sbjct: 281 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA 340
Query: 263 -----------------------LCEARKLFDQYSSWAASAYGNVALW----------NS 289
+ A L Y+ + W ++
Sbjct: 341 ETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSA 400
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
+I+ V EEA++L + + M + T S L AC +L + +H V
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL--KLGKSIHCFTVK 458
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
+ + D G+ L+ +YA+ G +AL F+R+ +D+V W+ LI G + G A +
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F + S + + + V+ C+ L L +G +H VK GFE + +LIDMY K
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578
Query: 470 CGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
CG + LF K +D V+W II QNG AKEAI+ F +M PN +TF+
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 638
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
VL A + E F + + G + ++D+ + G D +E+L EM K
Sbjct: 639 VLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697
Query: 589 PDKTIWASMLKACETHNN 606
D W +ML H +
Sbjct: 698 -DTVSWNAMLSGYAVHGH 714
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 167/443 (37%), Gaps = 108/443 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C +K GKS+HC +K + D+ TG L+SMYA A F+ M+
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++IV+W +++ Y P AI ++ + L ++ P+ V+ AC+L DLD G
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMF-YKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF-----------------------D 162
IH I + E D + N L+DMY KCGSL F +
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 163 QYSNWAASAYGNVALWN---------SMLSG---------GKQVHAFCVKRGFEKEDVTL 204
++ A S++ + L N S+L G HA ++ GF +
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SLIDMY KCG++D LFN M +D VSW ++ G
Sbjct: 672 NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSG----------------------- 708
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y ++ + AI L S + S + IDS +F S
Sbjct: 709 -----------------------------YAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALEL 378
L AC L G + Y + +L +DL R G L
Sbjct: 740 VLSAC-------RHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGF 792
Query: 379 FHRLP-KKDVVAWSGLIMGCTKH 400
+P + D W L+ C H
Sbjct: 793 IKVMPVEPDAGVWGALLGSCRMH 815
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
LQ+H I+ SG++ + + ++LI+LY+ A +F P + W+ +I T+
Sbjct: 49 LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
+ A ++ M+ + +++ + VLK C+ +L+ G H +RG E++
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
L+DMY K G++ +F MP+RDVV+W +I G Q+ EA+ +F+ M ++
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227
Query: 521 PNEITFLGVLSA 532
P+ ++ L +
Sbjct: 228 PSSVSLLNLFPG 239
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 40/248 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C + QG +H I+K G D N L+ MYA SL A LF
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 62 DEMA-RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
++ K+ V+W ++ AY N AI + H + + PN + +VL A +
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF-HQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
G H I + +T++ N+L+DMY KCG L + KLF++ + + W
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD------HKDTVSW 702
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVS 234
N+MLSG Y G D +ALF+ M E D VS
Sbjct: 703 NAMLSG--------------------------YAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 235 WTGIIVGC 242
+ ++ C
Sbjct: 737 FVSVLSAC 744
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 208/666 (31%), Positives = 353/666 (53%), Gaps = 44/666 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFT-----GNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
++ + ++LH ++ G Q + L+++Y +F SL A F + K I++W
Sbjct: 42 NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAW 101
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ + AI Y+ ML++G V P+ + Y VLKACS L LGR +HE +
Sbjct: 102 NAILRGLVAVGHFTKAIHFYHSMLQHG-VTPDNYTYPLVLKACSSLHALQLGRWVHETM- 159
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
K + + + ++DM+ KCGS+ R++F++ + ++A W +++ G G+
Sbjct: 160 HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPD------RDLASWTALICGTMWNGE 213
Query: 187 QVHAFCVKRGFEKEDVTLTSLI--DMYLKCGEIDD---GLALFNFMPERDVVSWTGIIVG 241
+ A + R E + S+I + CG ++ G+AL +
Sbjct: 214 CLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMAL-----------QVCAVRS 262
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
FE + +A++DMY C EA ++F Y +V W+++I+GY N +
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHM------VYSDVVSWSTLIAGYSQNCLYQ 316
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
E+ L + + G+ ++ TS L A L ++H ++ G D +VGS
Sbjct: 317 ESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQ--GKEMHNFVLKEGLMSDVVVGSA 374
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LI +YA G++K A +F KD++ W+ +I+G G A+ FR + + N
Sbjct: 375 LIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPN 434
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ S+L +C+ + +LR+GK++H + K G SLIDMY KCG ++ G +FK
Sbjct: 435 FITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFK 494
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M R+V ++ +I CG +G+ ++ +A++++M + +PN++TF+ +LSAC HAGL++
Sbjct: 495 QMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDR 554
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
W ++ SM +YG+EP++EHY CMVDL+G+AG D A + I MP PD ++ S+L AC
Sbjct: 555 GWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGAC 614
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAG 660
HN +L ++AE++L +D YV+LSN+YA+ W+ +SKVR K G EKK G
Sbjct: 615 RLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPG 674
Query: 661 MSWIEV 666
SWI+V
Sbjct: 675 SSWIQV 680
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 49/281 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG+ ++K G +L ++ G D++ N ++ MY +AH++F M
Sbjct: 236 VASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMV 295
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VSW+T++ Y+ N + +LY M+ G + N + ++VL A L G+
Sbjct: 296 YSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVG-LATNAIVATSVLPALGKLELLKQGK 354
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H + +E L D V+ + L+ MY CGS+ + S + ++ ++ +WNSM+ G
Sbjct: 355 EMHNFVLKEGLMSDVVVGSALIVMYANCGSIK----EAESIFECTSDKDIMVWNSMIVGY 410
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GK++H + K G
Sbjct: 411 NLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNV 470
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
SLIDMY KCG ++ G +F M R+V ++ +I C
Sbjct: 471 SVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISAC 511
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C Q +++QGK +H + K GL ++ GN+L+ MY+ L K+F +M
Sbjct: 438 VVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMM 497
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+ ++ TM++A S+ + + Y M E G+ PN + ++L ACS +G LD G
Sbjct: 498 VRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN-RPNKVTFISLLSACSHAGLLDRGW 556
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSL 156
L++ + + +E + + ++D+ + G L
Sbjct: 557 LLYNSMINDYGIEPNMEHYSCMVDLIGRAGDL 588
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/670 (31%), Positives = 346/670 (51%), Gaps = 39/670 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R C QR + G +H +IK G +D++ G +L+ +YA ++ A +FD + K
Sbjct: 149 IRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTP 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+WT ++T YT + R +++L+N M+E +V P+ ++ S++L ACS+ G L G+ IH
Sbjct: 209 VTWTAIITGYTKSGRSEVSLQLFNLMME-SNVIPDKYVLSSILNACSVLGYLKGGKQIHA 267
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ R + + D N L+D Y KCG + + LFD+ N+ W +M++G Q
Sbjct: 268 YVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLD------VKNIISWTTMIAGYMQ 321
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ + G++ ++ +S++ CG +D R + S+ +
Sbjct: 322 NSYDWEAVELVGEMFRMGWKPDEYACSSVLT---SCGSVD------ALQHGRQIHSY--V 370
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I C E F +AL+DMYS CN L +A+++FD + +V +N+MI GY
Sbjct: 371 IKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTC------HSVVYYNAMIEGYSRQG 424
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
A+ + + + TF S L LL + + Q+HGLI+ G+ LD
Sbjct: 425 YLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLC--LQLSKQIHGLIIKYGFSLDKFT 482
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
S LID+Y++ ++ A +F KD+V W+ L G + A+ L+ D+ S +
Sbjct: 483 SSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRE 542
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N+F +++ S LASL G+Q H +K G E + +L+DMY KCG +++
Sbjct: 543 RPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEK 602
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F +D W +I Q+G+ +EA+ F+ M+ + + PN +TF+ VLSAC H G
Sbjct: 603 IFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGF 662
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VE+ + SM YG+EP +EHY +V LLG+AG +A + I +M +P +W S+L
Sbjct: 663 VEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLL 721
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC N +L AE ++ P D YVMLSN++A+ GMW + ++R G K
Sbjct: 722 SACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVK 781
Query: 658 KAGMSWIEVS 667
+ G SWIEV+
Sbjct: 782 EPGQSWIEVN 791
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 136/259 (52%), Gaps = 5/259 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
+VH +V G + D + + L+ Y ++G+V A LF ++P +++V+WS ++ T+ G
Sbjct: 61 KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLG 120
Query: 402 LNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
N A L F + + D +N++I++S+++ C G QVH++ +K GF ++
Sbjct: 121 YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG 180
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
TSL+ +Y K GEID +F + + V+WT II G ++GR++ ++ F M++S +
Sbjct: 181 TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVI 240
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
P++ +L+AC G ++ I ++ E ++ + Y ++D + G +
Sbjct: 241 PDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMD--VSTYNVLIDFYTKCGRVKAGK 298
Query: 580 QLIAEMPFKPDKTIWASML 598
L + K + W +M+
Sbjct: 299 ALFDRLDVK-NIISWTTMI 316
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 350/671 (52%), Gaps = 44/671 (6%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
+ALR C S++Q +H RI S ++F GN ++ Y S+ A FD +ARK
Sbjct: 32 DALRQCQDLESVRQ---IHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARK 87
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N SW +M+TAY N A+ LY M ++PN +Y+ VL AC+ L+ G+ I
Sbjct: 88 NDYSWGSMLTAYAQNGHYRAALDLYKRM----DLQPNPVVYTTVLGACASIKALEEGKAI 143
Query: 128 HERITREK-LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H RI+ K L+ D +L N+LL MY KCGSL ++LF++ S + S+ WN+M++
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS------WNAMIAA 197
Query: 185 GKQVHAFC-VKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q F R +E DV T TS++ G +D G + + R
Sbjct: 198 YAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT------ 251
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
E +AL+ MY+ C L +A K+F + +V W++MI+ + +
Sbjct: 252 -----ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR------DVVSWSAMIAAFAETD 300
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+EAI S + G+ + YTF S L AC ++ + R VH I+ +GY++ +
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL--RAGRAVHDQILGNGYKITLVN 358
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
G+ L+DLY G++ A LF ++ +D W+ LI G +K G + L+R+M N+ +
Sbjct: 359 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 418
Query: 419 -DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ I S V+ C+ L + +Q H+ G + + TSL++MY + G ++
Sbjct: 419 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESAR 478
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M RD ++WT +I G ++G A+ ++EM +P+E+TF+ VL AC HAG
Sbjct: 479 QVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAG 538
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L E+ +F S++ +Y + P++ HY C++DLL +AG DAE+LI MP +P+ W+S+
Sbjct: 539 LQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSL 598
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L A H + K + A Q+ P DP+ YV+LSNV+A G ++ VR G +
Sbjct: 599 LGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVK 658
Query: 657 KKAGMSWIEVS 667
K+ G SWIEV+
Sbjct: 659 KRRGSSWIEVA 669
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 176/432 (40%), Gaps = 80/432 (18%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+R L C + QG+ +H I G D+ N LL+MYA L+DA K+F
Sbjct: 220 VRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQ 279
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ R+++VSW+ M+ A+ + AI Y+ M G V PN + +++VL AC+ GDL
Sbjct: 280 RLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG-VRPNYYTFASVLLACASVGDLR 338
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
GR +H++I + V L+D+Y GSL R LFDQ N + LW
Sbjct: 339 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR------DEGLW-- 390
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
T LI Y K G L L+ M V T II
Sbjct: 391 ------------------------TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIY 426
Query: 241 GCFECSCFTLSALVD-------------------------MYSNCNVLCEARKLFDQYSS 275
C +C +L A D MYS L AR++FD+ SS
Sbjct: 427 SCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSS 486
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+ W ++I+GY + ++ A+ L + G TF L AC
Sbjct: 487 R------DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC------ 534
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVV 388
S LQ G + + DY + N +IDL +R G + A EL + +P + + V
Sbjct: 535 -SHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV 593
Query: 389 AWSGLIMGCTKH 400
WS L+ H
Sbjct: 594 TWSSLLGASRIH 605
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 339/670 (50%), Gaps = 40/670 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G +HC I+ G D+ TG+ L+ MY+ L+ A ++F EM +N+
Sbjct: 145 LKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNL 204
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W+ ++ Y N R ++L+ ML+ G + + Y++V ++C+ LG +H
Sbjct: 205 VCWSAVIAGYVQNDRFIEGLKLFKDMLKVG-MGVSQSTYASVFRSCAGLSAFKLGTQLHG 263
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ YD+++ LDMY KC ++ K+F+ N +Y + +
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIV---------- 313
Query: 188 VHAFCVKRGFEKEDVTL------TSLIDMYLKCGEIDDGLALFN---FMPERDVVSWTGI 238
G+ ++D L SL YL EI AL + + G+
Sbjct: 314 --------GYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365
Query: 239 IVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
V C + + ++DMY C L EA +FD A + WN++I+ + N
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVS------WNAIIAAHEQN 419
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E+ + ++L + S M D +T+ S +KAC N + +++HG IV SG LD+
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALN--YGMEIHGRIVKSGMGLDWF 477
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS L+D+Y + G + A ++ RL +K V+W+ +I G + + A F M+
Sbjct: 478 VGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ F ++VL VC+ +A++ GKQ+HA +K + ++L+DMY KCG + D
Sbjct: 538 VIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSR 597
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F+ P+RD V+W+ +I +G ++AI F+EM +KPN F+ VL AC H G
Sbjct: 598 LMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMG 657
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
V++ F M+ YGL+PH+EHY CMVDLLG++ ++A +LI M F+ D IW ++
Sbjct: 658 YVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTL 717
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L C+ N ++ LL P+D S YV+L+NVYA +GMW ++K+R K +
Sbjct: 718 LSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLK 777
Query: 657 KKAGMSWIEV 666
K+ G SWIEV
Sbjct: 778 KEPGCSWIEV 787
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 212/449 (47%), Gaps = 28/449 (6%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ GKQ HA + F L+ Y K ++ +F+ MP RDV+SW +I G
Sbjct: 22 LNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFG 81
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y+ + A+ LFD +V WNS++S Y+ N N
Sbjct: 82 ---------------YAEIGNMGFAQSLFDTMPE------RDVVSWNSLLSCYLHNGVNR 120
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
++I + + S + D TF+ LKAC + ++ LQVH L + G+E D + GS
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYG--LGLQVHCLAIQMGFENDVVTGSA 178
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+Y++ + A +F +P++++V WS +I G ++ LF+DM+ V+
Sbjct: 179 LVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
Q +SV + C+ L++ + G Q+H +K F + I T+ +DMY KC + D +F
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH-AGLVE 540
+P S+ IIVG + + +A+ FQ + ++ L +EI+ G L+AC G +E
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
++K G + + ++D+ G+ G +A + +M + D W +++ A
Sbjct: 359 GIQLHGLAVKCGLGFNICVAN--TILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415
Query: 601 CETHNN-TKLVSIIAEQLLATSPEDPSKY 628
E + K +S+ L +T D Y
Sbjct: 416 HEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/607 (23%), Positives = 254/607 (41%), Gaps = 90/607 (14%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQ 163
F +S +L+ CS L+ G+ H ++ + N L+ Y K ++ K+FD+
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEID 218
+ +V WN+M+ G ++ + E++ V+ SL+ YL G
Sbjct: 67 M------PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNR 120
Query: 219 DGLALFNFMPE----RDVVSWTGIIVGC--------------------FECSCFTLSALV 254
+ +F M D +++ ++ C FE T SALV
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMYS C L A ++F + N+ W+++I+GYV N++ E + L + G
Sbjct: 181 DMYSKCKKLDGAFRIFREMPE------RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVG 234
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
M + T+ S ++C L F + Q+HG + S + D I+G+ +D+YA+ +
Sbjct: 235 MGVSQSTYASVFRSCAGLSAF--KLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSD 292
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ++F+ LP +++ +I+G + A +F+ + + ++ +S L CS
Sbjct: 293 AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSV 352
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ G Q+H VK G +++DMY KCG + + +F M RD VSW I
Sbjct: 353 IKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAI 412
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEY 553
I QN + ++ F M++S ++P++ T+ V+ AC + I + K
Sbjct: 413 IAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGM 472
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQL-------------------------------- 581
GL+ + +VD+ G+ G +AE++
Sbjct: 473 GLDWFVGS--ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYF 530
Query: 582 --IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ EM PD +A++L C +L I Q+L K + S+VY
Sbjct: 531 SQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQIL--------KLNLHSDVYIAST 582
Query: 640 MWDSLSK 646
+ D SK
Sbjct: 583 LVDMYSK 589
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 184/467 (39%), Gaps = 112/467 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +G LH +K GL +I N +L MY +L +A +FD+M R++
Sbjct: 346 ALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRD 405
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ A+ N+ + L+ ML ++EP+ F Y +V+KAC+ L+ G IH
Sbjct: 406 AVSWNAIIAAHEQNEEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGMEIH 464
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
RI + + D + + L+DMY KCG L K+ D+ + WNS++SG
Sbjct: 465 GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVS------WNSIISGFS 518
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GKQ+HA +K +
Sbjct: 519 SQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVY 578
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
++L+DMY KCG + D +F P+RD V+W+ +I
Sbjct: 579 IASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMIC---------------------- 616
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
Y + E+AI L + + + F
Sbjct: 617 ------------------------------AYAYHGHGEQAIKLFEEMQLLNVKPNHTIF 646
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFH 380
S L+AC ++ + + I+ S Y LD + S ++DL R V AL+L
Sbjct: 647 ISVLRACAHMGYVDKGLH---YFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIE 703
Query: 381 RLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN-QDVNQFII 425
+ + D V W L+ C G +A F ++ + QD + +++
Sbjct: 704 SMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVL 750
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+F S +L+ CS L +L GKQ HA + F L+ Y K ++ +F
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
MP RDV+SW +I G + G + + Q + + + + +++ +LS H G+ +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGN----MGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 542 AWTIFTSMK 550
+ IF M+
Sbjct: 122 SIEIFVRMR 130
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/708 (30%), Positives = 338/708 (47%), Gaps = 133/708 (18%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN-- 93
+ I+ N LL+ + +NDA KLFD+M +K+ SW TM+++Y + R A L++
Sbjct: 63 ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 94 ----------------------------HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ + + F +VL+ CS G + G
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+IH + + E + ++ L+DMY KC ++ F N LW +M++G
Sbjct: 183 MIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEF--LFKGLEFDRKNHVLWTAMVTGY 240
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
G+QVH F VK GF
Sbjct: 241 AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 300
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
++L+DMY KCG++ + + M + DVVSW ++VG
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVG-------------------- 340
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+V + EEA+ L ++H M ID YT
Sbjct: 341 --------------------------------FVRHGLEEEALRLFKNMHGRNMKIDDYT 368
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F S L C+ + + N + VHGLI+ +G+E +V + L+D+YA+ G++ A +F +
Sbjct: 369 FPSVLNCCV-VGSINPK---SVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +KDV++W+ L+ G ++ + + +F DM + + +QFI++S+L C+ L L G
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 484
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
KQVH +K G SL+ MY KCG +DD A+F M +DV++WT IIVG QN
Sbjct: 485 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 544
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G+ + ++ ++ M+ S +P+ ITF+G+L AC HAGLV+E F M YG++P EH
Sbjct: 545 GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 604
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y CM+DL G++G D+A+QL+ +M KPD T+W S+L AC H N +L A L
Sbjct: 605 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELE 664
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
P + YVMLSN+Y+ W+ ++K+RK K G K+ G SW+E++S
Sbjct: 665 PMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINS 712
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 211/541 (39%), Gaps = 117/541 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD--EMARK 67
LR C I+ G+ +H ++K G ++F L+ MYA +++A LF E RK
Sbjct: 169 LRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRK 228
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N V WT MVT Y N A+ + +M G VE N + + +L ACS G +
Sbjct: 229 NHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG-VECNQYTFPTILTACSSVLARCFGEQV 287
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H I + + + + L+DMY KCG L + + + + +V WNS++ G
Sbjct: 288 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMED------DDVVSWNSLMVGF 341
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
K VH +K GFE +
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLV 401
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+L+DMY K G++D +F M E+DV+SWT ++ G
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTG---------------------- 439
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y N +EE++ + + +G+ D +
Sbjct: 440 ------------------------------YAQNNSHEESLKIFCDMRVTGVNPDQFIVA 469
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L F QVH + SG V ++L+ +YA+ G + A +F +
Sbjct: 470 SILSACAELTLL--EFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ 527
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KDV+ W+ +I+G ++G + + M++S + +L CS + G++
Sbjct: 528 VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587
Query: 444 V-----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVG 497
+ +K G E +ID++ + G++D+ L M + D W ++
Sbjct: 588 YFQQMNKVYGIKPGPEH----YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Query: 498 C 498
C
Sbjct: 644 C 644
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
KS+H IIK G N L+ MYA ++ A+ +F++M K+++SWT++VT Y N
Sbjct: 384 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 443
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
+++++ M G V P+ F+ +++L AC+ L+ G+ +H + L + +
Sbjct: 444 NSHEESLKIFCDMRVTG-VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV 502
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFCV 193
N+L+ MY KCG L D + + + +V W +++ G Q + V
Sbjct: 503 YNSLVAMYAKCGCLD----DADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
G + +T L+ G +D+G F M + GI G +C +
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKV-----YGIKPGPEHYAC-----M 608
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+D++ L EA++L DQ + +W S++S ++E E A
Sbjct: 609 IDLFGRSGKLDEAKQLLDQ-----MDVKPDATVWKSLLSACRVHENLELA 653
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 178/465 (38%), Gaps = 128/465 (27%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H I+K G +++ + L+ MYA L +A + + M ++VSW +++ +
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343
Query: 82 NKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ A+RL+ +M +G +++ + + + +VL C + G ++ + +H I + E
Sbjct: 344 HGLEEEALRLFKNM--HGRNMKIDDYTFPSVLNCC-VVGSIN-PKSVHGLIIKTGFENYK 399
Query: 141 VLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------------- 184
++ N L+DMY K G + Y+ + +V W S+++G
Sbjct: 400 LVSNALVDMYAKTGDMDC----AYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCD 455
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
GKQVH +K G SL+ MY KCG
Sbjct: 456 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 515
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+DD A+F M +DV++WT IIVG
Sbjct: 516 LDDADAIFVSMQVKDVITWTAIIVG----------------------------------- 540
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN 334
Y N + ++ + SSG D TF L AC L++
Sbjct: 541 -----------------YAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVD 583
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGL 393
++ Q++ + Y + +IDL+ R G + A +L ++ K D W L
Sbjct: 584 EGRKYFQQMNKVYGIKPGPEHY---ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640
Query: 394 IMGCTKH-----------------GLNSLAYLLFRDMINSNQDVN 421
+ C H +N++ Y++ +M ++++ N
Sbjct: 641 LSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWN 685
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ L C + ++ GK +H IK GL SQ ++ N+L++MYA L+DA +F
Sbjct: 468 VASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVY--NSLVAMYAKCGCLDDADAIFVS 525
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M K++++WT ++ Y N + +++ Y+ M+ G+ P+ + +L ACS +G +D
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGT-RPDFITFIGLLFACSHAGLVDE 584
Query: 124 GRLIHERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
GR +++ + ++ ++D++ + G L ++L DQ + +W S
Sbjct: 585 GRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQ-----MDVKPDATVWKS 639
Query: 181 MLSG 184
+LS
Sbjct: 640 LLSA 643
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 344/668 (51%), Gaps = 32/668 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G +H +K G D+ TG+ LL MYA L+ + + F M KN
Sbjct: 181 LKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNW 240
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+ ++ N + L+ M + G V + +++V ++C+ L LG +H
Sbjct: 241 VSWSAIIAGCVQNDDLRGGLELFKEMQKAG-VGVSQSTFASVFRSCAGLSALRLGSQLHG 299
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ D V+ LDMY+KC +L+ +KLF+ N N+ +N+++ G
Sbjct: 300 HALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH------NLQSYNAIIVGYAR 353
Query: 185 -GKQVHAFCVKRGFEKEDVTL--TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
K + A + R +K + L SL + C I L E V +
Sbjct: 354 SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDL-------EGLQVHGLSMKSL 406
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
C C +A++DMY C L EA +F++ S A + WN++I+ + N E
Sbjct: 407 CQSNICVA-NAILDMYGKCGALVEACLVFEEMVSRDAVS------WNAIIAAHEQNGNEE 459
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+ ++L + SGM D +T+ S LKAC N +++H I+ S LD VG
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNC--GMEIHNRIIKSRLGLDSFVGIA 517
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+Y++ G ++ A +L RL ++ VV+W+ +I G + + A F M+ D +
Sbjct: 518 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
F +++L C+ L ++ GKQ+HA +K+ + + ++L+DMY KCG + D +F+
Sbjct: 578 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 637
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
P RD V+W ++ G Q+G +EA+ F+ M +KPN TFL VL AC H GLVE+
Sbjct: 638 KAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEK 697
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F SM YGL+P LEHY C+VD++G++G A +LI MPF+ D IW ++L C
Sbjct: 698 GLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSIC 757
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAG 660
+ H N ++ A +L PED + YV+LSN+YA GMW+ ++K+RK + G +K+ G
Sbjct: 758 KIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPG 817
Query: 661 MSWIEVSS 668
SWIE+ S
Sbjct: 818 CSWIEIKS 825
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 31/466 (6%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ HA + F+ LI MY+KC +++ +F+ MP+RD VSW ++ G
Sbjct: 58 LCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFG 117
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y+ + A+KLFD A +V WNS+ISGY+ N +
Sbjct: 118 ---------------YAGRGDIGVAQKLFD------AMPERDVVSWNSLISGYLHNGDHR 156
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+ I + + G D TF LK+C +L + +Q+HGL V G++ D + GS
Sbjct: 157 KVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG--GIQIHGLAVKMGFDCDVVTGSA 214
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ + +++ FH +P+K+ V+WS +I GC ++ LF++M + V+
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
Q +SV + C+ L++LR G Q+H +K F + + T+ +DMY+KC + D LF
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH-AGLVE 540
+P ++ S+ IIVG ++ + EA+ F+ + +S L +E++ G AC G +E
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
SMK + ++ ++D+ G+ G +A + EM + D W +++ A
Sbjct: 395 GLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAA 451
Query: 601 CETH-NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
E + N K +S+ L S +P ++ S + A G W +L+
Sbjct: 452 HEQNGNEEKTLSLFVWML--QSGMEPDEFTYGSVLKACAG-WQALN 494
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 156/624 (25%), Positives = 259/624 (41%), Gaps = 138/624 (22%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
+S + + CS L G+ H R+ + + + N L+ MY+KC L K+FD
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104
Query: 166 -----NWAASAYG--------------------NVALWNSMLS----------------- 183
+W A +G +V WNS++S
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164
Query: 184 ---------------------------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
GG Q+H VK GF+ + VT ++L+DMY KC +
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC------------------------------S 246
+D + F+ MPE++ VSW+ II GC + S
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 247 CFTLSAL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAY 281
C LSAL +DMY CN L +A+KLF+ +
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH----- 339
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
N+ +N++I GY +++ EA+ + + SG+ +D + + A +AC + L
Sbjct: 340 -NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIK--GDLEGL 396
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVHGL + S + + V + ++D+Y + G + A +F + +D V+W+ +I ++G
Sbjct: 397 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LF M+ S + ++F SVLK C+ +L G ++H +K +
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+LIDMY KCG ++ L + E+ VVSW II G +++EA F +M++ + P
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
+ T+ +L C + VE I +K E + ++ +VD+ + G D Q
Sbjct: 577 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS--TLVDMYSKCGNMQDF-Q 633
Query: 581 LIAEMPFKPDKTIWASMLKACETH 604
LI E D W +M+ H
Sbjct: 634 LIFEKAPNRDFVTWNAMVCGYAQH 657
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 175/440 (39%), Gaps = 107/440 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A R C + +G +H +K +I N +L MY +L +A +F+EM ++
Sbjct: 382 AFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRD 441
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ A+ N + L+ ML+ G +EP+ F Y +VLKAC+ L+ G IH
Sbjct: 442 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG-MEPDEFTYGSVLKACAGWQALNCGMEIH 500
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
RI + +L D+ + L+DMY KCG + + KL D+ A V WN+++SG
Sbjct: 501 NRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL------AEQTVVSWNAIISGFS 554
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GKQ+HA +K+ + +
Sbjct: 555 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 614
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
++L+DMY KCG + D +F P RD V+W ++ G
Sbjct: 615 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG--------------------- 653
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
Y + EEA+ + ++ + + TF
Sbjct: 654 -------------------------------YAQHGLGEEALKIFEYMQLENVKPNHATF 682
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L+AC + + + H ++ G + S ++D+ R G V ALEL +
Sbjct: 683 LAVLRACGH-MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM 741
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
P + D V W L+ C HG
Sbjct: 742 PFEADAVIWRTLLSICKIHG 761
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 235/752 (31%), Positives = 356/752 (47%), Gaps = 121/752 (16%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+S+ QG +H ++K GL +F N+LLS Y+ A ++FDE+ VSW+++V
Sbjct: 18 QSLLQGAHIHAHLLKSGLFA-VFR-NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
TAY++N P A+ + M SV N F+ VLK +G G +H L
Sbjct: 76 TAYSNNAMPRDALGAFRSM-RSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGL 131
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
D + N L+ MY G + R +FD+ A N WN ++S
Sbjct: 132 GGDIFVANALVAMYGGFGFVDEARMVFDE-----AGCERNTVSWNGLMSAYVKNDRCSHA 186
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
G++VHA ++ G++K+ T +L+DM
Sbjct: 187 VKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDM 246
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSCFTL 250
Y K G+I +F +PE DVVSW I GC + FTL
Sbjct: 247 YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 251 SA-----------------------------------LVDMYSNCNVLCEARKLFDQYSS 275
S+ LVDMY+ +L +A+K+FD
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFD---- 362
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
W ++ LWN++ISG Q+ EA++L + G ++ T + LK+ +L
Sbjct: 363 WIPQR--DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+ QVH L G+ D V + LID Y + + A +F + D++A++ +I
Sbjct: 421 SD--TRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMIT 478
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
++ A LF +M+ D + F++SS+L C+ L++ +GKQVHA +KR F
Sbjct: 479 ALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ +L+ Y KCG I+D F +PE+ VVSW+ +I G Q+G K A+ F M+
Sbjct: 539 DVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMV 598
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ PN IT VL AC HAGLV+EA F SMK +G+E EHY CM+DLLG+AG
Sbjct: 599 DEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKL 658
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
DDA +L+ MPF+ + +W ++L A H + +L + AE+L PE +V+L+N Y
Sbjct: 659 DDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTY 718
Query: 636 ATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
A+ GMWD ++KVRK K KK MSW+E+
Sbjct: 719 ASAGMWDDVAKVRKLMKDSKVKKEPAMSWVEL 750
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 236/499 (47%), Gaps = 41/499 (8%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R ++ G+ +H +I+ G +D+FT N L+ MY+ + A +F ++ ++VSW
Sbjct: 212 CTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSW 271
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ + A+ L M G V PN F S++LKAC+ SG +LGR IH +
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLV-PNVFTLSSILKACAGSGAFNLGRQIHGFMV 330
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---GKQ 187
+ + D + L+DMY K G L +K+FD W ++ LWN+++SG G Q
Sbjct: 331 KANADSDNYIAFGLVDMYAKHGLLDDAKKVFD----WIPQR--DLVLWNALISGCSHGAQ 384
Query: 188 VHA-----FC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
HA FC K GF+ TL +++ I D + + +S + ++
Sbjct: 385 -HAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVN 443
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G L+D Y C+ L A ++F+++ S+ ++ + SMI+ +
Sbjct: 444 G-----------LIDSYWKCDCLNYAYRVFEKHGSY------DIIAFTSMITALSQCDHG 486
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
E+AI L + G+ D + +S L AC +L + QVH ++ + D G+
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQ--GKQVHAHLIKRQFMSDVFAGN 544
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ YA+ G+++ A F LP+K VV+WS +I G +HG A +F M++ +
Sbjct: 545 ALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISP 604
Query: 421 NQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N ++SVL C+ + K+ ++ G E+ + +ID+ + G++DD + L
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMEL 664
Query: 480 FKFMP-ERDVVSWTGIIVG 497
MP + + W ++
Sbjct: 665 VNSMPFQTNAAVWGALLAA 683
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 41/272 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+ +H ++K D + L+ MYA L+DA K+FD + ++++
Sbjct: 310 LKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDL 369
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W +++ + + A+ L+ M + G + N +AVLK+ + + R +H
Sbjct: 370 VLWNALISGCSHGAQHAEALSLFCRMRKEG-FDVNRTTLAAVLKSTASLEAISDTRQVHA 428
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN------------- 174
+ D+ ++N L+D Y KC L ++F+++ ++ A+ +
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGED 488
Query: 175 -VALWNSML------------------------SGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ ML GKQVHA +KR F + +L+
Sbjct: 489 AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVY 548
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
Y KCG I+D F+ +PE+ VVSW+ +I G
Sbjct: 549 TYAKCGSIEDADLAFSGLPEKGVVSWSAMIGG 580
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 29/305 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ +I + +H K G D N L+ Y LN A+++F++
Sbjct: 407 LAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG 466
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+I+++T+M+TA + AI+L+ ML G ++P+ F+ S++L AC+ + G+
Sbjct: 467 SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-LDPDPFVLSSLLNACASLSAYEQGK 525
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H + + + D N L+ Y KCGS+ D ++ V W++M+ G
Sbjct: 526 QVHAHLIKRQFMSDVFAGNALVYTYAKCGSIE----DADLAFSGLPEKGVVSWSAMIGGL 581
Query: 185 -----GKQ---VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
GK+ V V +T+TS++ G +D+ FN M E + T
Sbjct: 582 AQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERT 641
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
C ++D+ L +A +L + N A+W ++++ +
Sbjct: 642 EEHYAC----------MIDLLGRAGKLDDAMELVNSMPFQT-----NAAVWGALLAASRV 686
Query: 297 NEQNE 301
+ E
Sbjct: 687 HRDPE 691
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 321/662 (48%), Gaps = 119/662 (17%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW 167
++LK C S L G+LIH++I L+ + L +L+++Y C + +F N
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 168 AASAYGNVALWNSMLSG------------------------------------------- 184
++ LWN +++
Sbjct: 68 L-----DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRV 122
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW------- 235
GK VH +K GF + V ++S + MY KC +D + LF+ MPERDV SW
Sbjct: 123 GYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCY 182
Query: 236 ----------------------------TGIIVGC--------------------FECSC 247
T +I C F
Sbjct: 183 YQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG 242
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F SALVDMY C L A+++F+Q NV WNSMI+GY L ++ I L
Sbjct: 243 FVSSALVDMYGKCGCLEMAKEVFEQIQR------KNVVSWNSMIAGYSLKGDSKSCIELF 296
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ G+ T +S L AC +N +F +HG I+ + E D V S+LIDLY
Sbjct: 297 RRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF---IHGYIIRNRVEADIFVNSSLIDLY 353
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ GN+ SA +F +PK +VV+W+ +I G K G A ++F DM + + +
Sbjct: 354 FKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFT 413
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
SVL CS LA L +GK++H F ++ E ++ + +L+DMY KCG +D+ L +F +PER
Sbjct: 414 SVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER 473
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D VSWT +I G +G+A EA+ F++M QS KP+++TFL +LSAC HAGLV+E F
Sbjct: 474 DFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYF 533
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP-FKPDKTIWASMLKACETHN 605
M EYG +P +EHY C++DLLG+ G +A +++ P + D + +++ AC H
Sbjct: 534 NQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHK 593
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
L I L+ P+DPS Y++LSN+YA++ WD + KVR K+LG KK G SWI
Sbjct: 594 KLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWI 653
Query: 665 EV 666
EV
Sbjct: 654 EV 655
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 366/690 (53%), Gaps = 65/690 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ + ++ GK +H + K+G D T N L+++Y +K+FD ++ +N
Sbjct: 17 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 76
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LSGDLDLGR 125
VSW +++++ S ++ A+ + ML+ +VEP+ F +V+ ACS + L +G+
Sbjct: 77 QVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGK 135
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLS 183
+H R K E ++ ++NTL+ MY K G L S ++G ++ WN++LS
Sbjct: 136 QVHAYGLR-KGELNSFIINTLVAMYGKLGKLAS------SKVLLGSFGGRDLVTWNTVLS 188
Query: 184 GGKQVHAFC---------VKRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFNFMPE 229
Q V G E ++ T++S++ L+ G+ AL N
Sbjct: 189 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN---- 244
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G + + F SALVDMY NC + R++FD + LWN+
Sbjct: 245 -----------GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR------KIGLWNA 287
Query: 290 MISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY NE ++EA+ L + S+G+ +S T + AC+ F+ + A +HG +V
Sbjct: 288 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA--IHGFVV 345
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G + D V + L+D+Y+RLG + A+ +F ++ +D+V W+ +I G + A L
Sbjct: 346 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 405
Query: 409 LFRDMINSNQDV-----------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
L M N + V N + ++L C+ L++L +GK++HA+ +K +
Sbjct: 406 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 465
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG + +F +P+++V++W II+ G +G +EAI + M+
Sbjct: 466 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 525
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+TF+ V +AC H+G+V+E IF MKP+YG+EP +HY C+VDLLG+AG +
Sbjct: 526 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 585
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A QL+ MP +K W+S+L A HNN ++ I A+ L+ P S YV+L+N+Y+
Sbjct: 586 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 645
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ G+WD ++VR+ K+ G K+ G SWIE
Sbjct: 646 SAGLWDKATEVRRNMKEQGVRKEPGCSWIE 675
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 61/446 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I L C ++ GK LH +K G L ++ F G+ L+ MY + + ++FD M
Sbjct: 218 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 277
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ I W M+ Y+ N+ A+ L+ M E + N + V+ AC SG
Sbjct: 278 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 337
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
IH + + L+ D + NTL+DMY + G + ++F + + ++ WN+M+
Sbjct: 338 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR------DLVTWNTMI 391
Query: 183 SG--------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+G ++V + + +TL +++ + G
Sbjct: 392 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 451
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + ++ T + VG SALVDMY+ C L +RK+FDQ
Sbjct: 452 IHAYAIKNNLA--TDVAVG---------SALVDMYAKCGCLQMSRKVFDQIPQ------K 494
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WN +I Y ++ +EAI LL + G+ + TF S AC S +
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC-------SHSGMV 547
Query: 343 VHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPK--KDVVAWSGLI 394
GL + + DY V + ++DL R G +K A +L + +P+ AWS L+
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV 420
H + + +++I +V
Sbjct: 608 GASRIHNNLEIGEIAAQNLIQLEPNV 633
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 231/763 (30%), Positives = 359/763 (47%), Gaps = 121/763 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + L +++ G LH ++K G + N+L+S Y+ A ++FDE+
Sbjct: 7 ISQQLTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIP 64
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW+++VTAY++N P AI+ ++ M G V N F VLK D LG
Sbjct: 65 DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-VCCNEFALPVVLKCVP---DAQLGA 120
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H D + N L+ MY G + R++FD+ A + N WN ++S
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE-----AGSERNAVSWNGLMS 175
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G+QVHA V+ G+EK
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 235
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------ 241
+ T +L+DMY+K G +D +F MP+ DVVSW +I G
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 242 -----------------CFECSCFTLS--------------------ALVDMYSNCNVLC 264
C F L LVDMY+ + L
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+A K+FD S + ++ LWN++ISG +++EA ++ + G+ ++ T +
Sbjct: 356 DAMKVFDWMS------HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAA 409
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
LK+ +L ++ QVH L G+ D V + LID Y + + A+ +F
Sbjct: 410 VLKSTASLEAASA--TRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 467
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
D++A + +I ++ A LF +M+ + + F++SS+L C+ L++ +GKQV
Sbjct: 468 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
HA +KR F + +L+ Y KCG I+D F +PER VVSW+ +I G Q+G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
K A+ F M+ + PN IT VL AC HAGLV+EA F SMK +G++ EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
M+DLLG+AG DDA +L+ MPF+ + ++W ++L A H + +L + AE+L PE
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+V+L+N YA+ GMW+ ++KVRK K +K+ MSW+EV
Sbjct: 708 SGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEV 750
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 350/671 (52%), Gaps = 43/671 (6%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
+ALR C S++Q +H RI S ++F GN ++ Y S+ A FD +ARK
Sbjct: 32 DALRQCQDLESVRQ---IHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARK 87
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N SW +M+TAY N A+ LY M ++PN +Y+ VL AC+ L+ G+ I
Sbjct: 88 NDYSWGSMLTAYAQNGHYRAALDLYKRM----DLQPNPVVYTTVLGACASIEALEEGKAI 143
Query: 128 HERITREK-LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H RI+ K L+ D +L N+LL MY KCGSL ++LF++ S + V+ WN+M++
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRS-----VSSWNAMIAA 198
Query: 185 GKQVHAFC-VKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q F R +E DV T TS++ G +D G + + R
Sbjct: 199 YAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT------ 252
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
E +AL+ MY+ C L +A K+F + +V W++MI+ + +
Sbjct: 253 -----ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR------DVVSWSAMIAAFAETD 301
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+EAI S + G+ + YTF S L AC ++ + R VH I+ +GY++ +
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL--RAGRAVHDQILGNGYKITLVN 359
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
G+ L+DLY G++ A LF ++ +D W+ LI G +K G + L+R+M N+ +
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 419
Query: 419 -DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ I S V+ C+ L + +Q H+ G + + TSL++MY + G ++
Sbjct: 420 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESAR 479
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M RD ++WT +I G ++G A+ ++EM +P+E+TF+ VL AC HAG
Sbjct: 480 QVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAG 539
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L E+ +F S++ +Y + P++ HY C++DLL +AG DAE+LI MP +P+ W+S+
Sbjct: 540 LQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSL 599
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L A H + K + A Q+ P DP+ YV+LSNV+A G ++ VR G +
Sbjct: 600 LGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVK 659
Query: 657 KKAGMSWIEVS 667
K+ G SWIEV+
Sbjct: 660 KRRGSSWIEVA 670
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 176/432 (40%), Gaps = 80/432 (18%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+R L C + QG+ +H I G D+ N LL+MYA L+DA K+F
Sbjct: 221 VRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQ 280
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ R+++VSW+ M+ A+ + AI Y+ M G V PN + +++VL AC+ GDL
Sbjct: 281 RLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG-VRPNYYTFASVLLACASVGDLR 339
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
GR +H++I + V L+D+Y GSL R LFDQ N + LW
Sbjct: 340 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR------DEGLW-- 391
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
T LI Y K G L L+ M V T II
Sbjct: 392 ------------------------TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIY 427
Query: 241 GCFECSCFTLSALVD-------------------------MYSNCNVLCEARKLFDQYSS 275
C +C +L A D MYS L AR++FD+ SS
Sbjct: 428 SCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSS 487
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+ W ++I+GY + ++ A+ L + G TF L AC
Sbjct: 488 R------DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC------ 535
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVV 388
S LQ G + + DY + N +IDL +R G + A EL + +P + + V
Sbjct: 536 -SHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV 594
Query: 389 AWSGLIMGCTKH 400
WS L+ H
Sbjct: 595 TWSSLLGASRIH 606
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 351/668 (52%), Gaps = 38/668 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C + ++ G +H ++ G D++ GN L+ MY+ F L++A +F+EM+ ++
Sbjct: 128 INSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS 187
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++++ Y SN A+ +Y+ G V P+ F S+VL AC + G +H
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAVHG 246
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I + + D ++ N LL MY K L R++F + A + WN+M+ G Q
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKM------AVKDSVTWNTMICGYAQ 300
Query: 188 V--HAFCVK------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ H VK GF + +++TS I + G++ G + ++ I
Sbjct: 301 LGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYL-----------I 349
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
FEC + L+DMY+ C L A+++FD + + WNS+I+GY +
Sbjct: 350 GSGFECDTVACNILIDMYAKCGDLLAAQEVFD------TTKCKDSVTWNSLINGYTQSGY 403
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+E + + DS TF L L + N +H ++ G+E + I+G
Sbjct: 404 YKEGLESFKMMKMERKP-DSVTFVLLLSIFSQLADINQ--GRGIHCDVIKFGFEAELIIG 460
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++L+D+YA+ G + L++F + D+++W+ +I ++ + + +M
Sbjct: 461 NSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLM 520
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ + +L +CS LA R+GK++H + K GFE +LI+MY KCG +++ + +
Sbjct: 521 PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKV 580
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
FK+M E+DVV+WT +I G G K+A+ FQ+M S + P+ + F+ + AC H+G+V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+E F MK +Y LEP +EHY C+VDLL ++G AE+ I MP KPD ++W ++L
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
AC NT + +++++L + +D YV++SN+YATLG WD + VR + K G +K+
Sbjct: 701 ACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKE 760
Query: 659 AGMSWIEV 666
G SWIE+
Sbjct: 761 PGSSWIEI 768
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 166/644 (25%), Positives = 296/644 (45%), Gaps = 53/644 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
L+ ++ Q +++H II GLS + L+S YA + +F ++ N
Sbjct: 26 LKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNN 85
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +++ A T N A+ Y M E ++P+ F + +V+ +C+ DL+LG ++H
Sbjct: 86 VYLWNSIIRALTHNGLFTQALGYYTEMRE-KKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGG- 185
E E D + N L+DMY + L R +F++ SN + + WNS++SG
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVS------WNSLISGYC 198
Query: 186 ---------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE---IDDGLALFNFMPERDVV 233
H F + G + T++S++ L CG + +G+A+ + + +
Sbjct: 199 SNGFWEDALDMYHKFRMT-GMVPDCFTMSSVL---LACGSLMAVKEGVAVHGVIEKIGIA 254
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+I+G + L+ MY L EAR++F + A + WN+MI G
Sbjct: 255 G--DVIIG---------NGLLSMYFKFERLREARRVFSKM------AVKDSVTWNTMICG 297
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y ++E ++ L + G D + TS ++AC + + + VH ++ SG+E
Sbjct: 298 YAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ--SGDLQVGKFVHKYLIGSGFE 354
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D + + LID+YA+ G++ +A E+F KD V W+ LI G T+ G F+ M
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 414 -INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ D F++ +L + S LA + +G+ +H +K GFE E I SL+D+Y KCGE
Sbjct: 415 KMERKPDSVTFVL--LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGE 472
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+DD L +F +M D++SW +I EM L P+E T LG+L
Sbjct: 473 MDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPM 532
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C + + I + G E ++ ++++ + G ++ ++ M K D
Sbjct: 533 CSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVV 590
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
W +++ A + K ++ A Q + S P ++ ++A
Sbjct: 591 TWTALISAFGMYGEGK-KALKAFQDMELSGVLPDSVAFIAFIFA 633
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 198/507 (39%), Gaps = 119/507 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ I +R CGQ ++ GK +H +I G D N L+ MYA L A ++F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
D K+ V+W +++ YT + + + M +E +P+ + +L S D
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER---KPDSVTFVLLLSIFSQLAD 437
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
++ GR IH + + E + ++ N+LLD+Y KCG + L +S +A ++ WN+
Sbjct: 438 INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD-DLLKVFSYMSAH---DIISWNT 493
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
+++ GK++H + K G
Sbjct: 494 VIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSG 553
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
FE +LI+MY KCG +++ + +F +M E+DVV+WT +I
Sbjct: 554 FESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALI----------------- 596
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
SA+G + + ++A+ + SG+
Sbjct: 597 ----------------------SAFG-------------MYGEGKKALKAFQDMELSGVL 621
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLG 370
DS F + + AC S + GL + DY + + +DL AR G
Sbjct: 622 PDSVAFIAFIFAC-------SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674
Query: 371 NVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+ A E +P K D W L+ C G ++A + + ++ N D + + V
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYV-LVS 733
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ + L + K V +G +KE
Sbjct: 734 NIYATLGKWDQVKTVRNSMKTKGLKKE 760
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 344/669 (51%), Gaps = 38/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G+ +H +K L D+ N +L+MYA S+++A ++FD+M K++
Sbjct: 251 LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSV 310
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT ++ Y A ++ M + G V PN Y VL A S L G+ +H
Sbjct: 311 VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVV-PNRITYINVLNAFSGPAALKWGKTVHS 369
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I E D + L+ MY KCGS R++F++ N ++ WN+M+ G
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN------RDLIAWNTMIGGLAE 423
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+++ + G +T L++ + + G R++ S +
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG---------REIHS--RV 472
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ F +AL+ MY+ C + +AR LF++ ++ W +MI G +
Sbjct: 473 VKDGFMFDISVQNALISMYARCGSIKDARLLFNKM------VRKDIISWTAMIGGLAKSG 526
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EA+ + + +G+ + T+TS L AC + + + ++H ++ +G D V
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD--WGRRIHQQVIEAGLATDAHV 584
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+++Y+ G+VK A ++F R+ ++D+VA++ +I G H L A LF +
Sbjct: 585 ANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 644
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ ++L C+ SL K++H+ +K G+ + +L+ Y KCG D L
Sbjct: 645 KPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALL 704
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M +R+V+SW II GC Q+GR ++ + F+ M +KP+ +TF+ +LSAC HAGL
Sbjct: 705 VFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGL 764
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+EE F SM ++G+ P +EHY CMVDLLG+AG D+ E LI MPF+ + IW ++L
Sbjct: 765 LEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALL 824
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC H N + AE L P++ + YV LS++YA GMWDS +K+RK ++ G K
Sbjct: 825 GACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTK 884
Query: 658 KAGMSWIEV 666
+ G SWIEV
Sbjct: 885 EPGRSWIEV 893
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 248/599 (41%), Gaps = 123/599 (20%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
L+ N Y +LK C DL GR +HE I + D +N L++MY++CGS
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSG----------------------------- 184
+ R+++++ ++ + + WN+M+ G
Sbjct: 192 IEEARQVWNKLNHTERTVHS----WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATT 247
Query: 185 ---------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G+++H +K + +++MY KCG I + +F+ M
Sbjct: 248 MRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMET 307
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ VVSWT II G Y++C
Sbjct: 308 KSVVSWTIIIGG---------------YADCG---------------------------- 324
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQ----VH 344
+E A + + G+ + T+ IN+LN F+ AL+ VH
Sbjct: 325 ---------HSEIAFEIFQKMQQEGVVPNRITY-------INVLNAFSGPAALKWGKTVH 368
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
I+ +G+E D VG+ L+ +YA+ G+ K ++F +L +D++AW+ +I G + G
Sbjct: 369 SHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWE 428
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A ++ M N+ +L C +L G+++H+ VK GF + +LI
Sbjct: 429 EASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALI 488
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY +CG I D LF M +D++SWT +I G ++G EA+A FQ+M Q+ LKPN +
Sbjct: 489 SMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRV 548
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
T+ +L+AC ++ I + E GL +V++ G DA Q+
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQV-IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDR 607
Query: 585 MPFKPDKTIWASMLKACETHN----NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
M + D + +M+ HN KL + E+ L D Y+ + N A G
Sbjct: 608 MT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL---KPDKVTYINMLNACANSG 662
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+ A+ ++ ++ G ++S + LK CI + + + +VH I+ LD +
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVA--GREVHEHIIQHCTVLDQYTVN 180
Query: 361 NLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
LI++Y + G+++ A +++++L ++ V +W+ +++G ++G A L R+M
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + +L C ++L G+++H +K + +++MY KCG I +
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M + VVSWT II G G ++ A FQ+M Q + PN IT++ VL+A
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ T+ + + G E L +V + + G + D Q+ ++ D W +M+
Sbjct: 361 LKWGKTVHSHI-LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMI 418
Query: 599 KACETHNNTKLVSIIAEQL 617
N + S I Q+
Sbjct: 419 GGLAEGGNWEEASEIYHQM 437
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ L C S++ K +H ++K G D GN L+S YA S +DA +FD+M +
Sbjct: 652 INMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMK 711
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N++SW ++ + R ++L+ M G ++P+ + ++L ACS +G L+ GR
Sbjct: 712 RNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG-IKPDIVTFVSLLSACSHAGLLEEGRR 770
Query: 127 IHERITREKLEYDTV-LMNTLLDMYVKCGSLTRKLFDQYSNWAASA--YGNVALWNSMLS 183
++R+ T+ ++D+ + G L D+ + N +W ++L
Sbjct: 771 YFCSMSRDFGITPTIEHYGCMVDLLGRAGQL-----DEVEALIKTMPFQANTRIWGALL- 824
Query: 184 GGKQVHA--FCVKRGFEK-------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G ++H +R E +L MY G D L M +R V
Sbjct: 825 GACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTK 884
Query: 235 WTG 237
G
Sbjct: 885 EPG 887
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 366/690 (53%), Gaps = 65/690 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ + ++ GK +H + K+G D T N L+++Y +K+FD ++ +N
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LSGDLDLGR 125
VSW +++++ S ++ A+ + ML+ +VEP+ F +V+ ACS + L +G+
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLS 183
+H R K E ++ ++NTL+ MY K G L S ++G ++ WN++LS
Sbjct: 223 QVHAYGLR-KGELNSFIINTLVAMYGKLGKLAS------SKVLLGSFGGRDLVTWNTVLS 275
Query: 184 GGKQVHAFC---------VKRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFNFMPE 229
Q V G E ++ T++S++ L+ G+ AL N
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN---- 331
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G + + F SALVDMY NC + R++FD + LWN+
Sbjct: 332 -----------GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD------RKIGLWNA 374
Query: 290 MISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY NE ++EA+ L + S+G+ +S T + AC+ F+ + A +HG +V
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA--IHGFVV 432
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G + D V + L+D+Y+RLG + A+ +F ++ +D+V W+ +I G + A L
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 409 LFRDMINSNQDV-----------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
L M N + V N + ++L C+ L++L +GK++HA+ +K +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG + +F +P+++V++W II+ G +G +EAI + M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+TF+ V +AC H+G+V+E IF MKP+YG+EP +HY C+VDLLG+AG +
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A QL+ MP +K W+S+L A HNN ++ I A+ L+ P S YV+L+N+Y+
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ G+WD ++VR+ K+ G K+ G SWIE
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 61/446 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I L C ++ GK LH +K G L ++ F G+ L+ MY + + ++FD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ I W M+ Y+ N+ A+ L+ M E + N + V+ AC SG
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
IH + + L+ D + NTL+DMY + G + ++F + + ++ WN+M+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED------RDLVTWNTMI 478
Query: 183 SG--------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+G ++V + + +TL +++ + G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + ++ T + VG SALVDMY+ C L +RK+FDQ
Sbjct: 539 IHAYAIKNNLA--TDVAVG---------SALVDMYAKCGCLQMSRKVFDQIPQ------K 581
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WN +I Y ++ +EAI LL + G+ + TF S AC S +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC-------SHSGMV 634
Query: 343 VHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPK--KDVVAWSGLI 394
GL + + DY V + ++DL R G +K A +L + +P+ AWS L+
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV 420
H + + +++I +V
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNV 720
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W L+ + L A L + DMI + + ++LK + L + GKQ+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 450 KRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
K G+ + +T+ +L+++Y KCG+ +F + ER+ VSW +I + + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
F+ M+ ++P+ T + V++AC + + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 224/691 (32%), Positives = 352/691 (50%), Gaps = 64/691 (9%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKL 60
L +VE+ RH ++ HC+ K G+ I+ NN+L Y+ S LN A KL
Sbjct: 4 LNSVVESSRH-----ALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKL 58
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM K+ V+W TM+T Y + A M G + +G+ + ++LK + +
Sbjct: 59 FDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRG-FQADGYTFGSILKGVAHACR 117
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
DLG+ +H I + E + LLDMY KC ++ D Y + N WN+
Sbjct: 118 HDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKC----ERVEDAYDVFQGMPVRNFVSWNA 173
Query: 181 MLSGGKQV----HAF----CV-KRGFEKEDVTLTSLID-----------MYLKCGEIDDG 220
++ G QV AF C+ K G ED T L+ M L C I G
Sbjct: 174 LIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHG 233
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
L +N + C+ TL+A YS C +L +A+++FD A
Sbjct: 234 LEFYNAL-----------------CNA-TLTA----YSECGLLEDAKRVFD-----GAVG 266
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
++ WNSM+ Y++++++E+A L + G D YT+T + AC + N +
Sbjct: 267 TRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKN--YG 324
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGN--VKSALELFHRLPKKDVVAWSGLIMGCT 398
H L++ G E + + LI +Y +L N +++AL LFH + KD V+W+ ++ G +
Sbjct: 325 KSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFS 384
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ G + A LF M +S ++++ + S+VL+ CS LA L+ G+Q+H VK GF+ D
Sbjct: 385 QMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDF 444
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+SLI MY KCG I+D F+ + ++W I+ Q+G+ A+ F M +
Sbjct: 445 VASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMRERE 504
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+K + +TF+ VL+AC H GLVE+ + SM+ +YG+ P +EHY C VDL G+AG ++A
Sbjct: 505 VKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEA 564
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+ LI MPF+P+ + ++L AC N +L + +A QLL PE+ YV+LSN+Y L
Sbjct: 565 KALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHL 624
Query: 639 GMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
WD + V + ++ KK G SWIEV +
Sbjct: 625 KRWDDKASVTRLMRERKVKKVPGWSWIEVKN 655
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 237/763 (31%), Positives = 365/763 (47%), Gaps = 121/763 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + L +++ G LH ++K G S F N+L+S Y+ A ++FDE+
Sbjct: 7 ISQQLTRYAAAQALLPGAHLHASLLKSG-SLASFR-NHLISFYSKCRRPCCARRVFDEIP 64
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW+++VTAY++N P AI+ ++ M G V N F VLK D LG
Sbjct: 65 DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-VCCNEFALPVVLKCVP---DARLGA 120
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H D + N L+ MY G + R++F++ A + N WN ++S
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE-----ADSERNAVSWNGLMS 175
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G+QVHA V+ G++K
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC----------------- 242
+ T +L+DMY+K G +D +F MP+ DVVSW +I GC
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 243 ---FECSCFTLSA-----------------------------------LVDMYSNCNVLC 264
+ FTLS+ LVDMY+ + L
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ARK+FD W + ++ L N++ISG +++EA++L + G+ ++ T +
Sbjct: 356 DARKVFD----WMF--HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
LK+ +L ++ QVH L V G+ D V + LID Y + + A +F
Sbjct: 410 VLKSTASLEAAST--TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
D++A + +I ++ A LF +M+ + + F++SS+L C+ L++ +GKQV
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
HA +KR F + +L+ Y KCG I+D F +PER VVSW+ +I G Q+G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
K A+ F M+ + PN IT VL AC HAGLV+EA F SMK +G++ EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
M+DLLG+AG DDA +L+ MPF+ + +IW ++L A H + +L + AE+L PE
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+V+L+N YA+ GMW+ ++KVRK K +K+ MSWIEV
Sbjct: 708 SGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEV 750
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 366/690 (53%), Gaps = 65/690 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ + ++ GK +H + K+G D T N L+++Y +K+FD ++ +N
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LSGDLDLGR 125
VSW +++++ S ++ A+ + ML+ +VEP+ F +V+ ACS + L +G+
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLS 183
+H R K E ++ ++NTL+ MY K G L S ++G ++ WN++LS
Sbjct: 223 QVHAYGLR-KGELNSFIINTLVAMYGKLGKLAS------SKVLLGSFGGRDLVTWNTVLS 275
Query: 184 GGKQVHAFC---------VKRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFNFMPE 229
Q V G E ++ T++S++ L+ G+ AL N
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN---- 331
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G + + F SALVDMY NC + R++FD + LWN+
Sbjct: 332 -----------GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD------RKIGLWNA 374
Query: 290 MISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY NE ++EA+ L + S+G+ +S T + AC+ F+ + A +HG +V
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA--IHGFVV 432
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G + D V + L+D+Y+RLG + A+ +F ++ +D+V W+ +I G + A L
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 409 LFRDMINSNQDV-----------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
L M N + V N + ++L C+ L++L +GK++HA+ +K +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG + +F +P+++V++W II+ G +G +EAI + M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+TF+ V +AC H+G+V+E IF MKP+YG+EP +HY C+VDLLG+AG +
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A QL+ MP +K W+S+L A HNN ++ I A+ L+ P S YV+L+N+Y+
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ G+WD ++VR+ K+ G K+ G SWIE
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 61/446 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I L C ++ GK LH +K G L ++ F G+ L+ MY + + ++FD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ I W M+ Y+ N+ A+ L+ M E + N + V+ AC SG
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
IH + + L+ D + NTL+DMY + G + ++F + + ++ WN+M+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED------RDLVTWNTMI 478
Query: 183 SG--------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+G ++V + + +TL +++ + G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + ++ T + VG SALVDMY+ C L +RK+FDQ
Sbjct: 539 IHAYAIKNNLA--TDVAVG---------SALVDMYAKCGCLQMSRKVFDQIPQ------K 581
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WN +I Y ++ +EAI LL + G+ + TF S AC S +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC-------SHSGMV 634
Query: 343 VHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPK--KDVVAWSGLI 394
GL + + DY V + ++DL R G +K A +L + +P+ AWS L+
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV 420
H + + +++I +V
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNV 720
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W L+ + L A L + DMI + + ++LK + L + GKQ+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 450 KRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
K G+ + +T+ +L+++Y KCG+ +F + ER+ VSW +I + + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
F+ M+ ++P+ T + V++AC + + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 237/763 (31%), Positives = 364/763 (47%), Gaps = 121/763 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + L +++ G LH ++K G S F N+L+S Y+ A + FDE+
Sbjct: 7 ISQQLTRYAAAQALLPGAHLHASLLKSG-SLASFR-NHLISFYSKCRRPCCARRFFDEIP 64
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW+++VTAY++N P AI+ ++ M G V N F VLK D LG
Sbjct: 65 DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-VCCNEFALPVVLKCVP---DARLGA 120
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H D + N L+ MY G + R++F++ A + N WN ++S
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE-----ADSERNAVSWNGLMS 175
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G+QVHA V+ G++K
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC----------------- 242
+ T +L+DMY+K G +D +F MP+ DVVSW +I GC
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 243 ---FECSCFTLSA-----------------------------------LVDMYSNCNVLC 264
+ FTLS+ LVDMY+ + L
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ARK+FD W + ++ L N++ISG +++EA++L + G+ ++ T +
Sbjct: 356 DARKVFD----WMF--HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
LK+ +L ++ QVH L V G+ D V + LID Y + + A +F
Sbjct: 410 VLKSTASLEAAST--TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
D++A + +I ++ A LF +M+ + + F++SS+L C+ L++ +GKQV
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
HA +KR F + +L+ Y KCG I+D F +PER VVSW+ +I G Q+G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
K A+ F M+ + PN IT VL AC HAGLV+EA F SMK +G++ EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
M+DLLG+AG DDA +L+ MPF+ + +IW ++L A H + +L + AE+L PE
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+V+L+N YA+ GMW+ ++KVRK K +K+ MSWIEV
Sbjct: 708 SGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEV 750
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 351/668 (52%), Gaps = 38/668 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C + ++ G +H ++ G D++ GN L+ MY+ F L++A +F+EM+ ++
Sbjct: 128 INSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS 187
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++++ Y SN A+ +Y+ G V P+ F S+VL AC + G +H
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAVHG 246
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I + + D ++ N LL MY K L R++F + A + WN+M+ G Q
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKM------AVKDSVTWNTMICGYAQ 300
Query: 188 V--HAFCVK------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ H VK GF + +++TS I + G++ G + ++ I
Sbjct: 301 LGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYL-----------I 349
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
FEC + L+DMY+ C L A+++FD + + WNS+I+GY +
Sbjct: 350 GSGFECDTVACNILIDMYAKCGDLLAAQEVFD------TTKCKDSVTWNSLINGYTQSGY 403
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+E + + DS TF L L + N +H ++ G+E + I+G
Sbjct: 404 YKEGLESFKMMKMERKP-DSVTFVLLLSIFSQLADINQ--GRGIHCDVIKFGFEAELIIG 460
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++L+D+YA+ G + L++F + D+++W+ +I ++ + + +M
Sbjct: 461 NSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLM 520
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ + +L +CS LA R+GK++H + K GFE +LI+MY KCG +++ + +
Sbjct: 521 PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKV 580
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
FK+M E+DVV+WT +I G G K+A+ FQ+M S + P+ + F+ + AC H+G+V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+E F MK +Y LEP +EHY C+VDLL ++G AE+ I MP KPD ++W ++L
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
AC NT + +++++L + +D YV++SN+YATLG WD + VR + K G +K+
Sbjct: 701 ACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKE 760
Query: 659 AGMSWIEV 666
G SWIE+
Sbjct: 761 PGSSWIEI 768
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 160/608 (26%), Positives = 283/608 (46%), Gaps = 52/608 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
L+ ++ Q +++H II GLS + L+S YA + +F ++ N
Sbjct: 26 LKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNN 85
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +++ A T N A+ Y M E ++P+ F + +V+ +C+ DL+LG ++H
Sbjct: 86 VYLWNSIIRALTHNGLFTQALGYYTEMRE-KKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGG- 185
E E D + N L+DMY + L R +F++ SN + + WNS++SG
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVS------WNSLISGYC 198
Query: 186 ---------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE---IDDGLALFNFMPERDVV 233
H F + G + T++S++ L CG + +G+A+ + + +
Sbjct: 199 SNGFWEDALDMYHKFRMT-GMVPDCFTMSSVL---LACGSLMAVKEGVAVHGVIEKIGIA 254
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+I+G + L+ MY L EAR++F + A + WN+MI G
Sbjct: 255 G--DVIIG---------NGLLSMYFKFERLREARRVFSKM------AVKDSVTWNTMICG 297
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y ++E ++ L + G D + TS ++AC + + + VH ++ SG+E
Sbjct: 298 YAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ--SGDLQVGKFVHKYLIGSGFE 354
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D + + LID+YA+ G++ +A E+F KD V W+ LI G T+ G F+ M
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 414 -INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ D F++ +L + S LA + +G+ +H +K GFE E I SL+D+Y KCGE
Sbjct: 415 KMERKPDSVTFVL--LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGE 472
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+DD L +F +M D++SW +I EM L P+E T LG+L
Sbjct: 473 MDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPM 532
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C + + I + + G E ++ ++++ + G ++ ++ M K D
Sbjct: 533 CSLLAVRRQGKEIHGYIF-KSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVV 590
Query: 593 IWASMLKA 600
W +++ A
Sbjct: 591 TWTALISA 598
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 198/507 (39%), Gaps = 119/507 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ I +R CGQ ++ GK +H +I G D N L+ MYA L A ++F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
D K+ V+W +++ YT + + + M +E +P+ + +L S D
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER---KPDSVTFVLLLSIFSQLAD 437
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
++ GR IH + + E + ++ N+LLD+Y KCG + L +S +A ++ WN+
Sbjct: 438 INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD-DLLKVFSYMSAH---DIISWNT 493
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
+++ GK++H + K G
Sbjct: 494 VIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSG 553
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
FE +LI+MY KCG +++ + +F +M E+DVV+WT +I
Sbjct: 554 FESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALI----------------- 596
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
SA+G + + ++A+ + SG+
Sbjct: 597 ----------------------SAFG-------------MYGEGKKALKAFQDMELSGVL 621
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLG 370
DS F + + AC S + GL + DY + + +DL AR G
Sbjct: 622 PDSVAFIAFIFAC-------SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674
Query: 371 NVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+ A E +P K D W L+ C G ++A + + ++ N D + + V
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYV-LVS 733
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ + L + K V +G +KE
Sbjct: 734 NIYATLGKWDQVKTVRNSMKTKGLKKE 760
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 366/717 (51%), Gaps = 85/717 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHC-----------RIIKYGLSQDIFTGNNLLSMYA 49
+D RR+ + + +R ++ + C R+ S+D+ + N++++ Y
Sbjct: 112 LDARRVFDGM---PERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYC 168
Query: 50 DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
+ DA LF +M ++N+V+WT M++ Y ++ ++ M+ + P+ ++
Sbjct: 169 HSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR-MMHHEGASPDQSNFA 227
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS---LTRKLFDQYSN 166
+VL A + DL + ++ + + E D V+ ++L++Y + S + K FD
Sbjct: 228 SVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFD---- 283
Query: 167 WAASAYGNVALWNSMLS----GGKQVHAFCV-KRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
N W++M++ GG+ A V R K + T+L+ +CG I +
Sbjct: 284 --GMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEAR 341
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
LF +P+ VVSW +I G + + +VD EA++LFD+ +
Sbjct: 342 ILFEQIPDPIVVSWNAMITG------YMQNGMVD---------EAKELFDRMP------F 380
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
N W MI+GY N ++EEA+ LL +H +GM + TS+ AC ++ +
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALET--GR 438
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVH L V +G + + V + LI +Y + N++ ++F+R+ KD V+W+ I ++
Sbjct: 439 QVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNN 498
Query: 402 L---------NSL----------------------AYLLFRDMINSNQDVNQFIISSVLK 430
+ N L A F+ M++ ++ N I++ +L
Sbjct: 499 MLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLS 558
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
VC L S + G+Q+H +K G + E I +L+ MY KCG D +F M ERD+ +
Sbjct: 559 VCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFT 617
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W I GC Q+G +EAI ++ M + PNE+TF+G+L+AC HAGLV+E W F SM
Sbjct: 618 WNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMS 677
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+YGL P LEHY CMVDLLG+ G AE+ I +MP +PD IW+++L AC+ H N ++
Sbjct: 678 RDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIG 737
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
AE+L T P + YVMLSN+Y++LGMW ++++RK K+ G K+ G SW+++
Sbjct: 738 RRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQI 794
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 230/513 (44%), Gaps = 62/513 (12%)
Query: 123 LGRLIHERITREKLEY-DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LGRL R + + + D + N+++ Y G L R LFD S GNV
Sbjct: 46 LGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISG------GNVRTAT 99
Query: 180 SMLSG----GKQVHAFCVKRGF-EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+LSG G+ + A V G E+ V +++ Y++ G+I LF+ MP RDV S
Sbjct: 100 ILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTS 159
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W ++ G C +R++ D ++ + N+ W MISGY
Sbjct: 160 WNSMVTG---------------------YCHSRQMVDAWNLFKQMPQRNLVTWTVMISGY 198
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V EQ+ + + +H G D F S L A L + L+ L++ +G+E
Sbjct: 199 VRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLR--PLVLKTGFES 256
Query: 355 DYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF-RD 412
D ++G++++++Y R + + A++ F + +++ WS +I + G A ++ RD
Sbjct: 257 DVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRD 316
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED----ITLTSLIDMYL 468
+ S I S + + LA R G+ A + FE+ ++ ++I Y+
Sbjct: 317 PVKS--------IPSQTALLTGLA--RCGRITEARIL---FEQIPDPIVVSWNAMITGYM 363
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G +D+ LF MP R+ +SW G+I G QNGR++EA+ Q + ++ + P+ +
Sbjct: 364 QNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTS 423
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMP 586
AC H G +E + S+ + G + Y C ++ + G+ + Q+ M
Sbjct: 424 SFLACSHIGALETGRQVH-SLAVKAGCQ--FNSYVCNALISMYGKCRNMEYVRQVFNRMR 480
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
K D W S + A +N + I + +L+
Sbjct: 481 VK-DTVSWNSFIAALVQNNMLEDARHIFDNMLS 512
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 18/249 (7%)
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
LD S I ARLG ++ A E+F +P +D++AW+ +I G+ A +LF +
Sbjct: 31 LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-EKEDITLTSLIDMYLKCGE 472
N ++S ++ G+ + A V G E+ + +++ Y++ G+
Sbjct: 91 SGGNVRTATILLSGYARL---------GRVLDARRVFDGMPERNTVAWNAMVSCYVQNGD 141
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
I LF MP RDV SW ++ G + + +A F++M Q L + G +
Sbjct: 142 ITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRI 201
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM---VDLLGQAGCFDDAEQLIAEMPFKP 589
+H + W IF M E G P ++ + V L G + L+ + F+
Sbjct: 202 EQHG----KGWDIFRMMHHE-GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFES 256
Query: 590 DKTIWASML 598
D I S+L
Sbjct: 257 DVVIGTSIL 265
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 236/768 (30%), Positives = 364/768 (47%), Gaps = 126/768 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL G RS+ G LH ++K GL N+LL++Y+ + A +FDE+
Sbjct: 7 IGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIP 64
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW+++VTAY++N P A+ + M G V N F VLK D+ G
Sbjct: 65 DPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRG-VPCNEFALPVVLKCAP---DVRFGA 120
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H +L +D + N L+ +Y G + R++FD+Y N WN+M+S
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGER--NAVSWNTMIS 178
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G+QVH V+ G+EK
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------- 244
+ T +L+DMY K G+I+ +F MP DVVSW I GC
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMK 298
Query: 245 -----CSCFTLSA-----------------------------------LVDMYSNCNVLC 264
+ FTLS+ LVDMY+ L
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID--SYTF 322
+ARK+FD ++ LWN++ISG + ++ E ++L + G+ +D T
Sbjct: 359 DARKVFDFMPRR------DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 412
Query: 323 TSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S LK+ + ++R QVH L G D V + LID Y + G + A+++F
Sbjct: 413 ASVLKSTASSEAICHTR---QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 382 LPKKDVVAWSGLIMGCTK--HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
D+++ + ++ ++ HG +++ LF M+ + + F++SS+L C+ L++
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIK--LFVQMLRKGLEPDSFVLSSLLNACTSLSAYE 527
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
+GKQVHA +KR F + +L+ Y KCG I+D F +PER +VSW+ +I G
Sbjct: 528 QGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLA 587
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
Q+G K A+ F M+ + PN IT VLSAC HAGLV++A F SMK +G++
Sbjct: 588 QHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTE 647
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
EHY CM+D+LG+AG +DA +L+ MPF+ + +W ++L A H + +L + AE+L
Sbjct: 648 EHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFT 707
Query: 620 TSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
PE +V+L+N YA+ GMWD ++KVRK K KK MSW+E+
Sbjct: 708 LEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEI 755
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 130/312 (41%), Gaps = 31/312 (9%)
Query: 1 MDLRR--IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH 58
+D+ R + L+ +I + +H K GL D N L+ Y L+ A
Sbjct: 405 LDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAI 464
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
K+F E +I+S TTM+TA + AI+L+ ML G +EP+ F+ S++L AC+
Sbjct: 465 KVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG-LEPDSFVLSSLLNACTSL 523
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
+ G+ +H + + + D N L+ Y KCGS+ D ++ + W
Sbjct: 524 SAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIE----DADMAFSGLPERGIVSW 579
Query: 179 NSMLSG------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
++M+ G GK+ + G +TLTS++ G +DD F M E
Sbjct: 580 SAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ T C ++D+ L +A +L + A N A+W +
Sbjct: 640 TFGIDRTEEHYAC----------MIDILGRAGKLEDAMELVNNMPFQA-----NAAVWGA 684
Query: 290 MISGYVLNEQNE 301
++ ++ E
Sbjct: 685 LLGASRVHRDPE 696
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 228/762 (29%), Positives = 364/762 (47%), Gaps = 106/762 (13%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+LR AL+ C RR++++G+ LH R+++ L D F ++LL+MY L DA ++F
Sbjct: 49 ELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVF 108
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M ++IV+WT M++A+T+ + A+ ++ M + G + PNGF ++VLKACS
Sbjct: 109 DGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEG-IAPNGFTLASVLKACSGGSHS 167
Query: 122 DLGRLIHERITR---------------------EKLEYDTVLM----------NTLLDMY 150
+H ++ + E +TVL+ N LL+ Y
Sbjct: 168 KFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGY 227
Query: 151 VKCGSLTRKLF---------DQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
+ G R + D+ S + + + G+ VHA +KRG E ++
Sbjct: 228 ARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDN 287
Query: 202 VTLTSLIDM-------------YLKCGEID------------------DGLALFN----- 225
V + L++M +++ E D + L LF
Sbjct: 288 VLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGM 347
Query: 226 --------FMPERDVVSWTGIIVGCFECSCFTL-----------SALVDMYSNCNVLCEA 266
F+ V S TG C + + A+++MY + +A
Sbjct: 348 GVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDA 407
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
FD + WN+++S + E+ + + + G + YT+ S L
Sbjct: 408 TVTFDLIHE------PDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVL 461
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+ C +L+N RF QVH I+ SG + D V L+D+YA+ G SA +F +L ++D
Sbjct: 462 RCCTSLMNL--RFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERD 519
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+W+ ++ G K FR M+ N + ++ L VCS +ASL G Q+H+
Sbjct: 520 AFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHS 579
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ +K G+ ++ +L+DMY+KCG I D LF RD V+W II G Q+G +
Sbjct: 580 WAIKSGWNSSVVS-GALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYK 638
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F++M+ +P+ ITF+GVLSAC HAGL+ E F S+ YG+ P +EHY CMV
Sbjct: 639 ALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMV 698
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+L +AG +AE LI +MP PD +IW ++L AC H N ++ AE+L P D S
Sbjct: 699 DILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDAS 758
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
++LSN+YA LG W +++VR G KK G SWIE++
Sbjct: 759 SSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEIN 800
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 221/698 (31%), Positives = 338/698 (48%), Gaps = 78/698 (11%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
+ ++ N LS L+ A L DEM +N+VSW T++ A ++R A+ LY ML
Sbjct: 73 NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
G V P F ++VL AC LD GR H + L+ + + N LL MY KCG +
Sbjct: 133 REGLV-PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGV 191
Query: 157 TR--KLFDQYSN--------------WAASAYGNVALWNSMLSGGKQV------------ 188
+LFD ++ A S + L+ M G +V
Sbjct: 192 EDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSC 251
Query: 189 --------------------HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
HA V++GF + SLIDMY KC ++D+ + +F+ +P
Sbjct: 252 AQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP 311
Query: 229 ERDVVSWTGIIVGCFECSCFT--LSALVDM-----------YSNCNVLC-------EARK 268
VSW +I G + + L L M YSN C AR
Sbjct: 312 NISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARA 371
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+FD+ S + V WN+++SGY E +++ + L + + D T L +
Sbjct: 372 MFDKISRPS------VTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSS 425
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C L + QVH V D V S L+D+Y++ G + A +F+R+ ++DVV
Sbjct: 426 CSRLGILD--LGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVV 483
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ +I G H LN A+ F+ M + + +S++ C+ L+S+ +G+Q+HA
Sbjct: 484 CWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQI 543
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
VK G+++ ++LIDMY KCG +DD F M +++V+W +I G QNG ++A+
Sbjct: 544 VKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAV 603
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F+ M+ + +P+ +TF+ VL+ C H+GLV+EA F SM+ YG+ P EHY C++D
Sbjct: 604 DLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDG 663
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AG + E LI MP K D +W +L AC H+N +L A+ L P++PS Y
Sbjct: 664 LGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPY 723
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
V+LSN+YA+LG S VR G K G SWI+
Sbjct: 724 VLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWID 761
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 245/581 (42%), Gaps = 101/581 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ G+ H +K GL +++F N LL MY + DA +LFD MA
Sbjct: 143 LASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMA 202
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLD- 122
N VS+T M+ + A+RL+ M G V + S+VL +C + + + D
Sbjct: 203 SPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSG-VRVDPVAVSSVLGSCAQACASEFDV 261
Query: 123 -----LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNV 175
LG+ IH I R+ D + N+L+DMY KC + K+FD N + +
Sbjct: 262 VRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVS---- 317
Query: 176 ALWNSMLSGGKQVHAFCV---------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
WN +++G Q ++ + G E +VT ++++ +K ++ A+F+
Sbjct: 318 --WNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDK 375
Query: 227 MPERDVVSWTGIIVG-CFE-----------------------------CSCFTL------ 250
+ V +W ++ G C E SC L
Sbjct: 376 ISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLG 435
Query: 251 -------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
S LVDMYS C + AR +F++ + +V WNSMI
Sbjct: 436 TQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTER------DVVCWNSMI 489
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
SG ++ NEEA + +GM ++ S + +C L + Q+H IV G
Sbjct: 490 SGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQ--GRQIHAQIVKDG 547
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
Y+ + VGS LID+YA+ GN+ A F + K++VAW+ +I G ++G A LF
Sbjct: 548 YDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFE 607
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-DIT-----LTSLID 465
M+ + Q + +VL CS G A E IT T LID
Sbjct: 608 YMLTTEQRPDGVTFIAVLTGCS-----HSGLVDEAIAFFNSMESTYGITPLAEHYTCLID 662
Query: 466 MYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAK 505
+ G + + AL MP + D + W ++ C + A+
Sbjct: 663 GLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAE 703
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 41/418 (9%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + + L+++Y G D L F +P + S+ +A +
Sbjct: 38 GLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSY---------------NAALS 82
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
L AR L D+ NV WN++I+ +E+ EA+ L + G+
Sbjct: 83 AARRAGDLDAARALLDEMPDR------NVVSWNTVIAALARSERAGEALELYEGMLREGL 136
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+T S L AC + + + HGL V G + + V + L+ +Y + G V+ A
Sbjct: 137 VPTHFTLASVLSACGAVAALDD--GRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDA 194
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS-- 433
+ LF + + V+++ ++ G + G A LF M S V+ +SSVL C+
Sbjct: 195 VRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQA 254
Query: 434 ------CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+ + R G+ +HA V++GF + SLIDMY KC ++D+ + +F +P
Sbjct: 255 CASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIS 314
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VSW +I G GQ G +A+ M +S +PNE+T+ +L++C A V A +F
Sbjct: 315 TVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFD 374
Query: 548 SM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKAC 601
+ +P L YC +L D +L M +PD+T A +L +C
Sbjct: 375 KISRPSVTTWNTLLSGYCQEEL------HQDTVELFRRMQHQNVQPDRTTLAVILSSC 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 31/221 (14%)
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK---------------------- 384
++ +G D + + L++LY+ G AL F LP+
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 385 ---------KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++VV+W+ +I + A L+ M+ F ++SVL C +
Sbjct: 94 RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
A+L G++ H VK G ++ +L+ MY KCG ++D + LF M + VS+T ++
Sbjct: 154 AALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMM 213
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
G Q G +A+ F M +S ++ + + VL +C A
Sbjct: 214 GGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQA 254
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 338/666 (50%), Gaps = 36/666 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C RS++ G+ +H ++ D+ N++LSMY SL +A +FD M KN+VSW
Sbjct: 108 CSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSW 167
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+M++ Y+ + AI LY ML G + P+ F + +++K+CS D L R +H +
Sbjct: 168 TSMISGYSRYGEEDNAITLYVQMLRSGHI-PDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQV 188
+ + D + N L+ MY K + D + ++ ++ W SM++G G ++
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMA----DAINVFSRIIIKDLISWGSMIAGFSQLGYEL 282
Query: 189 HAFCVKRG------FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
A C R ++ + S K E D G + + + S + GC
Sbjct: 283 EALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS--DLFAGC 340
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+L DMY+ C L AR +F ++ WN++I+G+ +E
Sbjct: 341 ---------SLCDMYAKCGFLESARTVFYHIEK------PDLVAWNAIIAGFASVSNAKE 385
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
+ + S + +G+ + T S L AC + N +QVH IV G+ LD V ++L
Sbjct: 386 SSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH--GIQVHSYIVKMGFNLDIPVCNSL 443
Query: 363 IDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+ +Y++ N+ AL++F + K D+V+W+ L+ C + L + M S +
Sbjct: 444 LSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPD 503
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+++VL +AS G Q+H F +K G + +LI+MY KCG ++ +F
Sbjct: 504 HVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFD 563
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ D++SW+ +IVG Q G KEA F+ M +KPNEITF+G+L+AC H G+VEE
Sbjct: 564 SIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEE 623
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
++ +M+ +Y + P EH CMVDLL +AGC D AE I +MPF PD +W ++L AC
Sbjct: 624 GLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAAC 683
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
+ H N ++ AE +L P + + VML N++A+ G W +++R + +++ K G
Sbjct: 684 KVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPG 743
Query: 661 MSWIEV 666
SWIE+
Sbjct: 744 QSWIEI 749
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 192/495 (38%), Gaps = 116/495 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C K + LH ++K D+ N L+SMY F+ + DA +F + K++
Sbjct: 206 VKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDL 265
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+ ++ A+ + ML +PN F++ + ACS + D GR IH
Sbjct: 266 ISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHG 325
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALWNS-- 180
+ L D +L DMY KCG L R +F W A G ++ N+
Sbjct: 326 LCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKE 385
Query: 181 -------------------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
ML+ G QVH++ VK GF + SL+
Sbjct: 386 SSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLS 445
Query: 210 MYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCF------------------------- 243
MY KC ++D L +F + + D+VSW ++ C
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHV 505
Query: 244 -------------------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
+ CF + +AL++MY+ C L ARK+FD
Sbjct: 506 TLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ ++ W+S+I GY +EA L + G+ + TF L AC
Sbjct: 566 GN------PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTAC---- 615
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S + GL + + DY + S ++DL AR G + A + ++P D
Sbjct: 616 ---SHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPD 672
Query: 387 VVAWSGLIMGCTKHG 401
VV W L+ C HG
Sbjct: 673 VVVWKTLLAACKVHG 687
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 45/334 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C + + G +H I+K G + DI N+LLSMY+ ++LNDA ++F+++
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464
Query: 66 RK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
K +IVSW T++TA + +RL M ++P+ + VL + ++G
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA-SRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
IH I + L D + N L++MY KCGSL RK+FD N ++ W+S++
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN------PDIISWSSLI 577
Query: 183 SGGKQVHAFCVKRGFE-----------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
G Q A C K FE ++T ++ G +++GL L+ M E
Sbjct: 578 VGYAQ--AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDY 635
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS------SW-----AASA 280
+S T CSC +VD+ + L A Q W A
Sbjct: 636 RISPTK-----EHCSC-----MVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKV 685
Query: 281 YGNVALWNSMISGYV-LNEQNEEAITLLSHIHSS 313
+GN+ + + ++ N A+ +L +IH+S
Sbjct: 686 HGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHAS 719
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S+ + + ++ CS L SL G+++H + ++ + I ++ MY KCG + +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F MP ++VVSWT +I G + G AI + +M++S P+ TF ++ +C
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC 209
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 213/649 (32%), Positives = 315/649 (48%), Gaps = 119/649 (18%)
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LG+LIH++I L+ + L +L+++Y C + +F N ++ LWN
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-----DITLWNG 267
Query: 181 MLSG---------------------------------------------GKQVHAFCVKR 195
+++ GK VH +K
Sbjct: 268 LMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKS 327
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-------------------- 235
GF + V ++S + MY KC +D + LF+ MPERDV SW
Sbjct: 328 GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELF 387
Query: 236 ---------------TGIIVGC--------------------FECSCFTLSALVDMYSNC 260
T +I C F F SALVDMY C
Sbjct: 388 EEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC 447
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
L A+++F+Q NV WNSMI+GY L ++ I L + G+
Sbjct: 448 GCLEMAKEVFEQIQR------KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLT 501
Query: 321 TFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
T +S L AC +N +F +HG I+ + E D V S+LIDLY + GN+ SA +F
Sbjct: 502 TLSSILMACSRSVNLQLGKF---IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+PK +VV+W+ +I G K G A ++F DM + + +SVL CS LA L
Sbjct: 559 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 618
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
+GK++H F ++ E ++ + +L+DMY KCG +D+ L +F +PERD VSWT +I G
Sbjct: 619 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 678
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G+A EA+ F++M QS KP+++TFL +LSAC HAGLV+E F M EYG +P +
Sbjct: 679 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 738
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMP-FKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
EHY C++DLLG+ G +A +++ P + D + +++ AC H L I L+
Sbjct: 739 EHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLI 798
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P+DPS Y++LSN+YA++ WD + KVR K+LG KK G SWIEV
Sbjct: 799 EKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 847
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 219/523 (41%), Gaps = 108/523 (20%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + GK +H +IK G + D+ ++ + MYA DA KLFDEM +++
Sbjct: 305 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV 364
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW +++ Y + +P A+ L+ M + +P+ + V+ +C+ DL+ G+ IH
Sbjct: 365 ASWNNVISCYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 423
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ R D + + L+DMY KCG L +++F+Q NV WNSM++G
Sbjct: 424 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQR------KNVVSWNSMIAGYSL 477
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK +H + ++ E +
Sbjct: 478 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 537
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+SLID+Y KCG I +F MP+ +VVSW +I G + + L ALV
Sbjct: 538 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSY-LEALV--------- 587
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ + + +G+ D+ TFT
Sbjct: 588 ------------------------------------------IFTDMRKAGVKPDAITFT 605
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L ++H I+ S E++ +V L+D+YA+ G V AL +F++LP
Sbjct: 606 SVLPACSQLAVLEK--GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 663
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-K 442
++D V+W+ +I HG A LF M S+ ++ ++L CS + G
Sbjct: 664 ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCY 723
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+ + GF+ + LID+ + G + + + + P+
Sbjct: 724 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 194/455 (42%), Gaps = 108/455 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + +++GK +H +++ G + D F + L+ MY L A ++F+++ RKN+VSW
Sbjct: 409 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW 468
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M+ Y+ I L+ M E G + P S++L ACS S +L LG+ IH I
Sbjct: 469 NSMIAGYSLKGDSKSCIELFRRMDEEG-IRPTLTTLSSILMACSRSVNLQLGKFIHGYII 527
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------- 184
R ++E D + ++L+D+Y KCG++ + + N + NV WN M+SG
Sbjct: 528 RNRVEADIFVNSSLIDLYFKCGNIGSAE-NVFQNMPKT---NVVSWNVMISGYVKVGSYL 583
Query: 185 ------------------------------------GKQVHAFCVKRGFEKEDVTLTSLI 208
GK++H F ++ E +V + +L+
Sbjct: 584 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 643
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KCG +D+ L +FN +PERD VSWT +I
Sbjct: 644 DMYAKCGAVDEALHIFNQLPERDFVSWTSMI----------------------------- 674
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+AYG+ + Q EA+ L + S D TF + L A
Sbjct: 675 ----------AAYGS-------------HGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 711
Query: 329 C--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--K 384
C L++ + Q +I G++ S LIDL R+G ++ A E+ R P +
Sbjct: 712 CSHAGLVDEGCYYFNQ---MIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIR 768
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+DV S L C H L + R +I + D
Sbjct: 769 EDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPD 803
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 338/666 (50%), Gaps = 36/666 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C RS++ G+ +H ++ D+ N++LSMY SL +A +FD M KN+VSW
Sbjct: 108 CSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSW 167
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+M++ Y+ + AI LY ML G + P+ F + +++K+CS D L R +H +
Sbjct: 168 TSMISGYSRYGEEDNAITLYVQMLRSGHI-PDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQV 188
+ + D + N L+ MY K + D + ++ ++ W SM++G G ++
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMA----DAINVFSRIIIKDLISWGSMIAGFSQLGYEL 282
Query: 189 HAFCVKRG------FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
A C R ++ + S K E D G + + + S + GC
Sbjct: 283 EALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS--DLFAGC 340
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+L DMY+ C L AR +F ++ WN++I+G+ +E
Sbjct: 341 ---------SLCDMYAKCGFLESARTVFYHIEK------PDLVAWNAIIAGFASVSNAKE 385
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
+ + S + +G+ + T S L AC + N +QVH IV G+ LD V ++L
Sbjct: 386 SSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH--GIQVHSYIVKMGFNLDIPVCNSL 443
Query: 363 IDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+ +Y++ N+ AL++F + K D+V+W+ L+ C + L + M S +
Sbjct: 444 LSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPD 503
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+++VL +AS G Q+H F +K G + +LI+MY KCG ++ +F
Sbjct: 504 HVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFD 563
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ D++SW+ +IVG Q G KEA F+ M +KPNEITF+G+L+AC H G+VEE
Sbjct: 564 SIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEE 623
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
++ +M+ +Y + P EH CMVDLL +AGC D AE I +MPF PD +W ++L AC
Sbjct: 624 GLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAAC 683
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
+ H N ++ AE +L P + + VML N++A+ G W +++R + +++ K G
Sbjct: 684 KVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPG 743
Query: 661 MSWIEV 666
SWIE+
Sbjct: 744 QSWIEI 749
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 192/495 (38%), Gaps = 116/495 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C K + LH ++K D+ N L+SMY F+ + DA +F + K++
Sbjct: 206 VKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDL 265
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+ ++ A+ + ML +PN F++ + ACS + D GR IH
Sbjct: 266 ISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHG 325
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALWNS-- 180
+ L D +L DMY KCG L R +F W A G ++ N+
Sbjct: 326 LCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKE 385
Query: 181 -------------------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
ML+ G QVH++ VK GF + SL+
Sbjct: 386 SSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLS 445
Query: 210 MYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCF------------------------- 243
MY KC ++D L +F + + D+VSW ++ C
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHV 505
Query: 244 -------------------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
+ CF + +AL++MY+ C L ARK+FD
Sbjct: 506 TLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ ++ W+S+I GY +EA L + G+ + TF L AC
Sbjct: 566 GN------PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTAC---- 615
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S + GL + + DY + S ++DL AR G + A + ++P D
Sbjct: 616 ---SHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPD 672
Query: 387 VVAWSGLIMGCTKHG 401
VV W L+ C HG
Sbjct: 673 VVVWKTLLAACKVHG 687
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 45/334 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C + + G +H I+K G + DI N+LLSMY+ ++LNDA ++F+++
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464
Query: 66 RK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
K +IVSW T++TA + +RL M ++P+ + VL + ++G
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA-SRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
IH I + L D + N L++MY KCGSL RK+FD N ++ W+S++
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN------PDIISWSSLI 577
Query: 183 SGGKQVHAFCVKRGFE-----------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
G Q A C K FE ++T ++ G +++GL L+ M E
Sbjct: 578 VGYAQ--AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDY 635
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS------SW-----AASA 280
+S T CSC +VD+ + L A Q W A
Sbjct: 636 RISPTK-----EHCSC-----MVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKV 685
Query: 281 YGNVALWNSMISGYV-LNEQNEEAITLLSHIHSS 313
+GN+ + + ++ N A+ +L +IH+S
Sbjct: 686 HGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHAS 719
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S+ + + ++ CS L SL G+++H + ++ + I ++ MY KCG + +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F MP ++VVSWT +I G + G AI + +M++S P+ TF ++ +C
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC 209
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 325/637 (51%), Gaps = 45/637 (7%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA--IRLYNHMLEYGSVEPNGFMYSAV 111
L+ AH LFD++ ++ ++ ++ AY+S+ A + LY ML + V PN + +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRH-RVAPNNYTFPFA 131
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA 171
LKACS D GR IH L+ D + LLDMYVKC L D +A
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP----DAAHIFATMP 187
Query: 172 YGNVALWNSMLSG----GKQVHAFC-------VKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
++ WN+ML+G G HA TL +L+ + + G + G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
Query: 221 LALFNF------MPERDVVS--WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
++ + P R+ S G+++G +AL+DMY+ C L AR++FD
Sbjct: 248 TSVHAYCIRACLHPNRNSKSKLTDGVLLG---------TALLDMYAKCGSLLYARRVFD- 297
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACIN 331
A N W+++I G+VL + +A L + + G+C S T SAL+AC +
Sbjct: 298 -----AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 352
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + R Q+H L+ SG D G++L+ +YA+ G + A+ LF + KD V++S
Sbjct: 353 LDHL--RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ G ++G A+L+F+ M N + + + S++ CS LA+L+ G+ H + R
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G E +LIDMY KCG ID +F MP RD+VSW +I G G +G KEA A F
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 530
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
EM P+ +TF+ +LSAC H+GLV E F M YGL P +EHY CMVDLL +
Sbjct: 531 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 590
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G D+A + I MP + D +W ++L AC + N L ++ + PE +V+L
Sbjct: 591 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
SN+Y+ G +D ++VR K G KK+ G SWIE++
Sbjct: 651 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 687
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 198/500 (39%), Gaps = 121/500 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C G+++H I GL D+F LL MY L DA +F M ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 69 IVSWTTMVTAYTSNKRPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+V+W M+ Y + + A+ L + ++ + PN A+L + G L G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 128 H----------ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAAS 170
H R ++ KL +L LLDMY KCGSL R++FD W+A
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 171 AYGNV---------ALWNSMLSG-------------------------GKQVHAFCVKRG 196
G V L+ +ML+ G+Q+HA K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------ 244
+ SL+ MY K G ID +ALF+ M +D VS++ ++ G +
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 245 ------------------CSCFTLSAL-------------------------VDMYSNCN 261
+C L+AL +DMY+ C
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +R++F+ S ++ WN+MI+GY ++ +EA L +++ G D T
Sbjct: 491 RIDLSRQVFNMMPSR------DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 544
Query: 322 FTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F L AC + ++ F + HG +T E YI ++DL +R G + A E
Sbjct: 545 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME-HYIC---MVDLLSRGGFLDEAYEF 600
Query: 379 FHRLP-KKDVVAWSGLIMGC 397
+P + DV W L+ C
Sbjct: 601 IQSMPLRADVRVWVALLGAC 620
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I ALR C ++ G+ LH + K G+ D+ GN+LLSMYA ++ A LFDEMA
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VS++ +V+ Y N R A ++ M + +VEP+ +++ ACS L GR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N L+DMY KCG L+R++F+ + ++ WN+M++
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR------DIVSWNTMIA 515
Query: 184 G------GKQVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G GK+ A ++ GF + VT L+ G + +G F+ M
Sbjct: 516 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C +++ G+ H +I GL+ + N L+ MYA ++ + ++F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ M ++IVSW TM+ Y + A L+ M G P+G + +L ACS SG
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSHSG 556
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 217/741 (29%), Positives = 360/741 (48%), Gaps = 87/741 (11%)
Query: 4 RRIVEALRH--------CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN 55
R +V RH C S +SLH +K GL D+F L+++YA F +
Sbjct: 753 RSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIR 812
Query: 56 DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC 115
+A LFD MA +++V W M+ AY A+ L++ G P+ + +
Sbjct: 813 EARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTG-FRPDDVTLRTLSRVV 871
Query: 116 SLSGDLDLGRLIHERITR----EKLEYDTVLMNTLLDMYVKCGSLTRKL---FDQYSNWA 168
++ + T+ + D ++ N L +++ G + D ++
Sbjct: 872 KCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRV 931
Query: 169 ASAYGNVALWNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
A + ++++G GKQ+H ++ G ++ LI+MY+K G + +
Sbjct: 932 ACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARS 991
Query: 223 LFNFMPERDVVSWTGIIVGCF-----ECSC------------------------------ 247
+F M E D++SW +I GC ECS
Sbjct: 992 VFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEG 1051
Query: 248 ---------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
F +AL+D+YS + EA LF + ++A
Sbjct: 1052 GYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF------DLAS 1105
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN+++ GY+++ +A+ L + SG D T +A KA L+ Q+H +
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQ--GKQIHAV 1163
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+V G+ LD V S ++D+Y + G ++SA +F +P D VAW+ +I GC ++G A
Sbjct: 1164 VVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHA 1223
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+ M S +++ ++++K CS L +L +G+Q+HA VK + +TSL+DM
Sbjct: 1224 LFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDM 1283
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I+D LFK R + SW +IVG Q+G AKEA+ +F+ M + P+ +TF
Sbjct: 1284 YAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTF 1343
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+GVLSAC H+GLV EA+ F SM+ YG+EP +EHY C+VD L +AG ++AE++I+ MP
Sbjct: 1344 IGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMP 1403
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F+ +++ ++L AC + + +AE+LLA P D + YV+LSNVYA W++++
Sbjct: 1404 FEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVAS 1463
Query: 647 VRKAGKKLGEKK-AGMSWIEV 666
R +K+ KK G SW+++
Sbjct: 1464 ARNMMRKVNVKKDPGFSWVDL 1484
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 179/675 (26%), Positives = 294/675 (43%), Gaps = 91/675 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN- 68
LR + GK H RI+ G D F NNL++MYA SL+ A KLFD N
Sbjct: 663 LRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNR 722
Query: 69 -IVSWTTMVTAYTSN-KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+V+W +++A ++ + + L+ +L V + V K C LS
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLF-RLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + L++D + L+++Y K G + R LFD A +V LWN M+
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFD------GMAVRDVVLWNVMM-- 833
Query: 185 GKQVHAFCV------------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN------F 226
K C+ + GF +DVTL +L +KC + L F F
Sbjct: 834 -KAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL-SRVVKCKKNILELKQFKAYATKLF 891
Query: 227 MPE---RDVVSWTGII------------VGCF--------ECSCFTLSALVDMYSNCNVL 263
M + DV+ W + V CF C T ++ + + N L
Sbjct: 892 MYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCL 951
Query: 264 CEARKL--------FDQY----------------SSWAASAYG-----NVALWNSMISGY 294
+++ DQ S A S +G ++ WN+MISG
Sbjct: 952 ELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGC 1011
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
L+ E ++ + H+ + D +T S L+AC +L A Q+H + +G L
Sbjct: 1012 TLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEG-GYYLATQIHACAMKAGVVL 1070
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V + LID+Y++ G ++ A LF D+ +W+ ++ G G A L+ M
Sbjct: 1071 DSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQ 1130
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S + +Q + + K L L++GKQ+HA VKRGF + + ++DMYLKCGE++
Sbjct: 1131 ESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEME 1190
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F +P D V+WT +I GC +NG+ + A+ + +M S+++P+E TF ++ AC
Sbjct: 1191 SARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACS 1250
Query: 535 HAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
+E+ I ++ K +P + +VD+ + G +DA L + +
Sbjct: 1251 LLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTRRIAS- 1307
Query: 594 WASMLKACETHNNTK 608
W +M+ H N K
Sbjct: 1308 WNAMIVGLAQHGNAK 1322
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 144/602 (23%), Positives = 263/602 (43%), Gaps = 89/602 (14%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW 167
++L+ + DL LG+ H RI D + N L+ MY KCGSL+ RKLFD +
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD- 719
Query: 168 AASAYGNVALWNSML--------------------------------------------- 182
++ WN++L
Sbjct: 720 ---TNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASP 776
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
S + +H + VK G + + +L+++Y K G I + LF+ M RDVV W +++
Sbjct: 777 SASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWN-VMMKA 835
Query: 243 FECSCFTLSALVDMYSNCN-----------------VLCEARKL-FDQYSSWAASAY--- 281
+ +C A++ ++S + V C+ L Q+ ++A +
Sbjct: 836 YVDTCLEYEAML-LFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYD 894
Query: 282 ---GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK--ACINLLNFN 336
+V +WN +S ++ + EA+ + +S + D TF L A +N L
Sbjct: 895 DDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELG 954
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
Q+HG+++ SG + VG+ LI++Y + G+V A +F ++ + D+++W+ +I G
Sbjct: 955 K----QIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL-ASLRRGKQVHAFCVKRGFEK 455
CT GL + +F ++ + +QF ++SVL+ CS L Q+HA +K G
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVL 1070
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ T+LID+Y K G++++ LF D+ SW I+ G +G +A+ + M
Sbjct: 1071 DSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQ 1130
Query: 516 QSRLKPNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+S + ++IT + A GLV + ++ + G L ++D+ + G
Sbjct: 1131 ESGERSDQITLVNAAKAA--GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGE 1188
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+ A ++ +E+P PD W +M+ C N + ++ + S P +Y + V
Sbjct: 1189 MESARRVFSEIP-SPDDVAWTTMISGC-VENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 635 YA 636
A
Sbjct: 1247 KA 1248
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 230/757 (30%), Positives = 361/757 (47%), Gaps = 110/757 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++++G H I + GL +D+F G L+ MY+ L A ++FD+M ++++
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDV 195
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA-CSLSGDLDLGRLIH 128
V+W M+ + ++ P A+ + M G VEP+ + C LS +++L R IH
Sbjct: 196 VAWNAMIAGLSQSEDPCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLS-NIELCRSIH 253
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN------------ 174
+ R ++ + + N L+D+Y KCG + R++FDQ + ++G
Sbjct: 254 GYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV 311
Query: 175 --VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+ L++ M L GK++H +++ + + + T L+
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------------- 241
MY KCGE + LF + RD+V+W+ II
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 242 --------CFECS---------CFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
C + S CFT+ +ALV MY+ C A F++
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
SS ++ WNS+I+GY AI + + S + D+ T + AC L
Sbjct: 492 SS------RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ + +HGLIV G+E D V + LID+YA+ G++ SA LF++ KD V W+
Sbjct: 546 DLDQ--GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++G A F M N N SVL + LA+ R G HA ++ G
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + SLIDMY KCG++ LF M +D VSW ++ G +G AIA F
Sbjct: 664 FLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFS 723
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M +S+++ + ++F+ VLSACRH GLVEE IF SM +Y ++P LEHY CMVDLLG+A
Sbjct: 724 LMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRA 783
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G FD+ I MP +PD +W ++L +C H+N KL + + L+ P +P+ +V+LS
Sbjct: 784 GLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLS 843
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
++YA G W K R LG KK G SW+E+ +
Sbjct: 844 SIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/630 (25%), Positives = 268/630 (42%), Gaps = 111/630 (17%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +II G + +L+++Y+ F + A +FD + + W +M+ AYT +K+
Sbjct: 51 IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
N A+ +Y M+E G +EP+ + ++ VLKAC+ + +L G H I R LE D +
Sbjct: 110 YNEALEMYYCMVEKG-LEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ--------------- 187
L+DMY K G L R++FD+ +V WN+M++G Q
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPK------RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQ 222
Query: 188 -----------------------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
+H + +R F LID+Y KCG++D
Sbjct: 223 LVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVD 280
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+F+ M ++D VSW ++ G CF E +LFD+
Sbjct: 281 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFV---------------EVLELFDKMK---- 321
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
GNV I+ + SA A ++
Sbjct: 322 --LGNVR-------------------------------INKVSAVSAFLAAAETIDLEK- 347
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
++HG + + D +V + L+ +YA+ G + A +LF L +D+VAWS +I
Sbjct: 348 -GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ G A LF++M N N+ + S+L C+ L+ L+ GK +H F VK + +
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
T T+L+ MY KCG L F M RD+V+W +I G Q G AI F ++ S
Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ P+ T +GV+ AC +++ T + + G E ++D+ + G A
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSA 585
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTK 608
E L + F D+ W ++ A + + K
Sbjct: 586 EFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 166/443 (37%), Gaps = 108/443 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C +K GKS+HC +K + D+ TG L+SMYA A F+ M+
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++IV+W +++ Y P AI ++ + L ++ P+ V+ AC+L DLD G
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMF-YKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF-----------------------D 162
IH I + E D + N L+DMY KCGSL F +
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 163 QYSNWAASAYGNVALWN---------SMLSG---------GKQVHAFCVKRGFEKEDVTL 204
++ A S++ + L N S+L G HA ++ GF +
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SLIDMY KCG++ LFN M +D VSW ++ G
Sbjct: 672 NSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSG----------------------- 708
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y ++ + AI L S + S + IDS +F S
Sbjct: 709 -----------------------------YAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALEL 378
L AC L G + Y + +L +DL R G L
Sbjct: 740 VLSAC-------RHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGF 792
Query: 379 FHRLP-KKDVVAWSGLIMGCTKH 400
+P + D W L+ C H
Sbjct: 793 IKVMPVEPDAGVWGALLGSCRMH 815
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
LQ+H I+ SG++ + + ++LI+LY+ A +F P + W+ +I T+
Sbjct: 49 LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
+ A ++ M+ + +++ + VLK C+ +L+ G H +RG E++
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
L+DMY K G++ +F MP+RDVV+W +I G Q+ EA+ +F+ M ++
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227
Query: 521 PNEITFLGVLSA 532
P+ ++ L +
Sbjct: 228 PSSVSLLNLFPG 239
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 40/248 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C + QG +H I+K G D N L+ MYA SL A LF
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 62 DEMA-RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
++ K+ V+W ++ AY N AI + H + + PN + +VL A +
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF-HQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
G H I + +T++ N+L+DMY KCG L + KLF++ + + W
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD------HKDTVSW 702
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVS 234
N+MLSG Y G D +ALF+ M E D VS
Sbjct: 703 NAMLSG--------------------------YAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 235 WTGIIVGC 242
+ ++ C
Sbjct: 737 FVSVLSAC 744
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 351/671 (52%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +++ GK + I++ G D+F ++L+ +YAD + DA + FD+M K+
Sbjct: 17 IKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDC 76
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y + AI+L+ M+ +P+ ++ VL ++ GR +H
Sbjct: 77 VLWNVMINGYVQCGESDSAIKLFKDMMS-SEAKPDSVTFACVLSISCSEAMVEYGRQLHG 135
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ R L++ ++ NTL+ +Y K L RKLFD ++ +WN M+ G
Sbjct: 136 LVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI------DLVVWNRMIGG--- 186
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-------RDVVSWTGIIV 240
V+ GF +D ++ L + + G D + +F+P + + G IV
Sbjct: 187 ----YVQNGF-MDDASM--LFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239
Query: 241 --GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
G + SAL+D+Y C A K+F+ + + ++ ++ +MISGYVLN
Sbjct: 240 RHGVI-LDVYLNSALIDLYFKCRDAVMACKMFNLSTKF------DIVIYTAMISGYVLNG 292
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
N++A+ + + M ++ TF+S L AC L + ++HG I+ + E V
Sbjct: 293 MNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAI--KLGRELHGYIIKNELEEKCPV 350
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
GS ++++YA+ G + A +F R+ KD + W+ +I ++ G A LFR M
Sbjct: 351 GSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGV 410
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ +S+ L C+ + +L GK++H F +K FE + +++LI+MY KCG+++
Sbjct: 411 KYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARL 470
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M E++ V+W II G +G +++A F M++ ++P+ ITFL +LS+C HAG
Sbjct: 471 VFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQ 530
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VE+ F M EYG+ +EHY CM DL G+AG D+A ++I MPF P ++W ++L
Sbjct: 531 VEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLL 590
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC H N +L + + LL P++ Y++L++V A G W S+ K++ K+ G +K
Sbjct: 591 GACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQK 650
Query: 658 KAGMSWIEVSS 668
G SWIEV++
Sbjct: 651 VPGCSWIEVNN 661
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 233/550 (42%), Gaps = 108/550 (19%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
V P+ + + V+K C+ ++ LG++I + I + D + ++L+ +Y G + R
Sbjct: 6 VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
+ FD+ + + LWN M++G
Sbjct: 66 RFFDKMID------KDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS 119
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+Q+H V+ G + + +L+ +Y K ++ D LF+ MP+ D+V
Sbjct: 120 ISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W +I G Y
Sbjct: 180 WNRMIGG----------------------------------------------------Y 187
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V N ++A L + + S+G+ DS TFTS L + + ++HG IV G L
Sbjct: 188 VQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQ--IKEIHGYIVRHGVIL 245
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D + S LIDLY + + A ++F+ K D+V ++ +I G +G+N A +FR ++
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N SS+L C+ LA+++ G+++H + +K E++ +++++MY KCG +D
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F + +D + W II Q+G+ +EAI F++M +K + +T LSAC
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+ + I M + E L ++++ + G + A +L+ + + ++ W
Sbjct: 426 NIPALHYGKEIHGFMI-KGAFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAW 483
Query: 595 ASMLKACETH 604
S++ A H
Sbjct: 484 NSIIAAYGYH 493
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ D YTF +K C L N R + +I+ G++LD V S+LI LYA G ++
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNV--RLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A F ++ KD V W+ +I G + G + A LF+DM++S + + VL +
Sbjct: 63 DARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISC 122
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
A + G+Q+H V+ G + + +L+ +Y K ++ D LF MP+ D+V W
Sbjct: 123 SEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNR 182
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+I G QNG +A F EMI + +KP+ ITF L +
Sbjct: 183 MIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPS 221
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + AL C ++ GK +H +IK D+F + L++MYA LN A +F
Sbjct: 413 DCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVF 472
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M KN V+W +++ AY + ++ L+++MLE G ++P+ + +L +C +G +
Sbjct: 473 NLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG-IQPDHITFLTILSSCGHAGQV 531
Query: 122 DLGRLIHERITRE 134
+ G +T E
Sbjct: 532 EDGVRYFRCMTEE 544
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 229/684 (33%), Positives = 352/684 (51%), Gaps = 56/684 (8%)
Query: 10 LRHCGQRR-SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C R S+ GK H +IK +F NNLL MY + A KLFD M ++N
Sbjct: 25 LVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRN 84
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++++ YT + + L+ + + F +S L C + DL LGRLIH
Sbjct: 85 VVSWNSLISGYTQMGFYHEVMNLFKEA-RMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 143
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
IT L +L N+L+DMY KCG + R +F+ +A +V+ WNS+++G
Sbjct: 144 ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE-----SADELDSVS-WNSLIAGYV 197
Query: 187 QVHA---------FCVKRGFEKEDVTLTSLIDM-------YLKCGEIDDGLALFNFMPER 230
++ + ++ G L S + ++CG++ G A+ +
Sbjct: 198 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV-KLGLDL 256
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
DVV T AL+D Y+ L +A K+F NV ++N+M
Sbjct: 257 DVVVGT---------------ALLDTYAKIGDLEDATKIFKLMPD------PNVVMYNAM 295
Query: 291 ISGYV-----LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
I+G++ +E EA+ L + S GM +TF+S LKAC + F Q+H
Sbjct: 296 IAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC--GKQIHA 353
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
I + D +G+ L++LY+ G+++ L+ FH PK DVV+W+ LI+G ++G
Sbjct: 354 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 413
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LF +++ S + ++F IS +L C+ LA+++ G+Q+HA+ +K G I S I
Sbjct: 414 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 473
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG+ID FK D+VSW+ +I Q+G AKEA+ F+ M S + PN IT
Sbjct: 474 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 533
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FLGVL AC H GLVEE F MK ++G+ P+++H C+VDLLG+AG +AE I +
Sbjct: 534 FLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDS 593
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
F+ D +W S+L AC H T +AE+++ PE + YV+L N+Y G+ +
Sbjct: 594 GFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 653
Query: 646 KVRKAGKKLGEKK-AGMSWIEVSS 668
++R K G KK G+SWIEV +
Sbjct: 654 EIRNLMKDRGVKKEPGLSWIEVGN 677
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 240/575 (41%), Gaps = 125/575 (21%)
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+N Y + + Y+ +++ + +G L G+L H + + + L+N LL MY
Sbjct: 6 HNPQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYC 65
Query: 152 KCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG------------------------- 184
KCG + +KLFD+ NV WNS++SG
Sbjct: 66 KCGETDVAKKLFDRMPKR------NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLD 119
Query: 185 -------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
G+ +HA G + SLIDMY KCG ID +F
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE 179
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
E D VSW +I G
Sbjct: 180 SADELDSVSWNSLIAG-------------------------------------------- 195
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF--ALQV 343
YV N+E + LL + G+ ++SY SALKAC + NF+S +
Sbjct: 196 --------YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS--NFSSSIECGKML 245
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG------C 397
HG V G +LD +VG+ L+D YA++G+++ A ++F +P +VV ++ +I G
Sbjct: 246 HGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETM 305
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
N YL F +M + ++F SS+LK CS + + GKQ+HA K + ++
Sbjct: 306 ADEFANEAMYLFF-EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 364
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+L+++Y G I+DGL F P+ DVVSWT +IVG QNG+ + + F E++ S
Sbjct: 365 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 424
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD----LLGQAG 573
KP+E T +LSAC + V+ I Y ++ + ++ + + + + G
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQIHA-----YAIKTGIGNFTIIQNSQICMYAKCG 479
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
D A E PD W+ M+ + H K
Sbjct: 480 DIDSANMTFKETK-NPDIVSWSVMISSNAQHGCAK 513
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 221/579 (38%), Gaps = 147/579 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL CG+ ++ G+ +H I GL + N+L+ MY ++ A +F+ +
Sbjct: 126 ALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELD 185
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLDLGRL 126
VSW +++ Y + +RL ML +G + N + + LKAC + S ++ G++
Sbjct: 186 SVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG-LNLNSYALGSALKACGSNFSSSIECGKM 244
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + L+ D V+ LLD Y K G L K+F + NV ++N+M++G
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD------PNVVMYNAMIAG 298
Query: 185 -------------------------------------------------GKQVHAFCVKR 195
GKQ+HA K
Sbjct: 299 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY 358
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ ++ +L+++Y G I+DGL F+ P+ DVVSWT +IVG
Sbjct: 359 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG-------------- 404
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+V N Q E +TL + SG
Sbjct: 405 --------------------------------------HVQNGQFEGGLTLFHELLFSGR 426
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D +T + L AC NL S Q+H + +G I+ ++ I +YA+ G++ SA
Sbjct: 427 KPDEFTISIMLSACANLAAVKS--GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 484
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
F D+V+WS +I +HG A LF M S N VL CS
Sbjct: 485 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS-- 542
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
H V+ G Y + + D G+ +V I+
Sbjct: 543 ---------HGGLVEEGLR------------YFEIMKKDHGIT-------PNVKHSACIV 574
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
G+ GR EA ++ ++ S + + + + +LSACR
Sbjct: 575 DLLGRAGRLAEAESF---IMDSGFEGDPVMWRSLLSACR 610
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 209/669 (31%), Positives = 336/669 (50%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + K G+ LH ++K G S + + N L+++Y+ + A ++F+ M +++
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ ++++ + + A+ L+ M ++P+ +++L ACS G L +G+ H
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMC-LDCLKPDCVTVASLLSACSSVGALLVGKQFHS 396
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + D +L LLD+YVKC + + + ++ NV LWN ML
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSDIKTA----HEFFLSTETENVVLWNVMLVAYGLLD 452
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++ G E T S++ +D G + T ++
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH-----------TQVLK 501
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A K+F + +V W +MI+GY +E+
Sbjct: 502 TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE------KDVVSWTAMIAGYAQHEKF 555
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + G+ D+ F SA+ AC + N Q+H SGY D VG+
Sbjct: 556 AEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQ--GQQIHAQACVSGYSDDLSVGN 613
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LYAR G V+ A F ++ KD ++W+ LI G + G A LF M + Q++
Sbjct: 614 ALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEI 673
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F + + +A+++ GKQ+HA +K G + E LI +Y KCG IDD F
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MPE++ +SW ++ G Q+G +A++ F++M Q + PN +TF+GVLSAC H GLV+
Sbjct: 734 FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVD 793
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F SM+ +GL P EHY C+VDLLG++G A + + EMP +PD + ++L A
Sbjct: 794 EGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N + A LL P+D + YV+LSN+YA G W + R+ K G KK
Sbjct: 854 CIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEP 913
Query: 660 GMSWIEVSS 668
G SWIEV++
Sbjct: 914 GRSWIEVNN 922
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/682 (24%), Positives = 298/682 (43%), Gaps = 109/682 (15%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G LH +I+K G ++ L+ +Y F L+ A +FDEM + + W ++ + +
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG--RLIHERITREKLEYD 139
K + L+ ML+ V+P+ Y+ VL+ C GD+ IH R E
Sbjct: 147 GKMAGRVLGLFRRMLQ-EKVKPDERTYAGVLRGCG-GGDVPFHCVEKIHARTITHGYENS 204
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA----------------------- 169
+ N L+D+Y K G L +K+FD +W A
Sbjct: 205 LFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHT 264
Query: 170 -SAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
Y +++S+LS G+Q+H +K+GF E +L+ +Y + G
Sbjct: 265 SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 220 GLALFNFMPERDVVSWTGIIVG-----------------CFEC---SCFTLS-------- 251
+FN M +RD VS+ +I G C +C C T++
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 252 ---------------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
AL+D+Y C+ + A + F ++ NV
Sbjct: 385 VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF------LSTETENV 438
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
LWN M+ Y L + E+ + + + G+ + +T+ S L+ C +L + Q+H
Sbjct: 439 VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVD--LGEQIH 496
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
++ +G++ + V S LID+YA+LG + AL++F RL +KDVV+W+ +I G +H +
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF++M + + +S + C+ + +L +G+Q+HA G+ + +L+
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
+Y +CG++ D F + +D +SW +I G Q+G +EA++ F +M ++ + N
Sbjct: 617 SLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSF 676
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TF G + + +M + G + E ++ L + G DDAE+ E
Sbjct: 677 TF-GPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFE 735
Query: 585 MPFKPDKTIWASMLKACETHNN 606
MP K ++ W +ML H +
Sbjct: 736 MPEK-NEISWNAMLTGYSQHGH 756
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 214/479 (44%), Gaps = 66/479 (13%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW------ 235
S G ++H +K GF E V L+D+Y+ G++D + +F+ MP R + W
Sbjct: 84 FSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHR 143
Query: 236 -----------------------------TGIIVGC---------------------FEC 245
G++ GC +E
Sbjct: 144 FVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYEN 203
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
S F + L+D+Y L A+K+FD + + W +M+SG + EEA+
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS------WVAMLSGLSQSGCEEEAVL 257
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L +H+SG+ Y F+S L AC + + + Q+HGL++ G+ L+ V + L+ L
Sbjct: 258 LFCQMHTSGVYPTPYIFSSVLSACTKVEFY--KVGEQLHGLVLKQGFSLETYVCNALVTL 315
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y+RLGN A ++F+ + ++D V+++ LI G ++ G + A LF+ M + +
Sbjct: 316 YSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTV 375
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+S+L CS + +L GKQ H++ +K G + I +L+D+Y+KC +I F
Sbjct: 376 ASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET 435
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+VV W ++V G E+ F +M ++PN+ T+ +L C V+ I
Sbjct: 436 ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 495
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
T + + G + ++ ++D+ + G D A ++ + K D W +M+ H
Sbjct: 496 HTQVL-KTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEK-DVVSWTAMIAGYAQH 552
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 206/496 (41%), Gaps = 102/496 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C ++ GK H IK G+S DI LL +Y + + AH+ F
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF 430
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+N+V W M+ AY N + +++ M G +EPN F Y ++L+ CS +
Sbjct: 431 LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEG-IEPNQFTYPSILRTCSSLRAV 489
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NWAASAYG- 173
DLG IH ++ + +++ + + L+DMY K G L K+F + +W A G
Sbjct: 490 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGY 549
Query: 174 ------------------------NVALWNSM--------LSGGKQVHAFCVKRGFEKED 201
N+ +++ L+ G+Q+HA G+ +
Sbjct: 550 AQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDL 609
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+L+ +Y +CG++ D F+ + +D +SW +I G
Sbjct: 610 SVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISG-------------------- 649
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
F Q SG+ EEA++L S + +G I+S+T
Sbjct: 650 --------FAQ-------------------SGHC-----EEALSLFSQMSKAGQEINSFT 677
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F A+ A N + Q+H +I+ +G++ + V + LI LYA+ GN+ A F
Sbjct: 678 FGPAVSA--AANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFE 735
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P+K+ ++W+ ++ G ++HG A LF DM N VL CS + + G
Sbjct: 736 MPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEG 795
Query: 442 -------KQVHAFCVK 450
++VH K
Sbjct: 796 IKYFQSMREVHGLVPK 811
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 30/276 (10%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C +++ QG+ +H + G S D+ GN L+S+YA + DA+ FD++ K+
Sbjct: 580 AISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD 639
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SW ++++ + + A+ L++ M + G E N F + + A + ++ LG+ IH
Sbjct: 640 NISWNSLISGFAQSGHCEEALSLFSQMSKAGQ-EINSFTFGPAVSAAANVANVKLGKQIH 698
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYSNWAASAYGNVALWNSMLSGG 185
I + + +T + N L+ +Y KCG++ R+ F+ N WN+ML+G
Sbjct: 699 AMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEK-------NEISWNAMLTGY 751
Query: 186 KQ-VHAFCVKRGFE--------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
Q H F FE VT ++ G +D+G+ F M E
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVH----- 806
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
G++ +C +VD+ +L AR+ ++
Sbjct: 807 GLVPKPEHYAC-----VVDLLGRSGLLSRARRFVEE 837
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 340/663 (51%), Gaps = 26/663 (3%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G +HC I+ G D+ TG+ L+ MY+ L+DA ++F EM +N+
Sbjct: 145 LKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNL 204
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W+ ++ Y N R ++L+ ML+ G + + Y++V ++C+ LG +H
Sbjct: 205 VCWSAVIAGYVQNDRFIEGLKLFKDMLKVG-MGVSQSTYASVFRSCAGLSAFKLGTQLHG 263
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ YD+++ LDMY KC + K+F+ N +Y + + + G
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQG-- 321
Query: 188 VHAFCVKRGFEKEDVTL--TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FE 244
+ A + + ++ ++ SL C I L + + G+ V C
Sbjct: 322 LKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHL---------EGIQLHGLAVKCGLG 372
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ + ++DMY C L EA +F++ A + WN++I+ + NE+ + +
Sbjct: 373 FNICVANTILDMYGKCGALMEACLIFEEMERRDAVS------WNAIIAAHEQNEEIVKTL 426
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+L + S M D +T+ S +KAC N + ++HG I+ SG LD+ VGS L+D
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALN--YGTEIHGRIIKSGMGLDWFVGSALVD 484
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + G + A ++ RL +K V+W+ +I G + + A F M+ + +
Sbjct: 485 MYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYT 544
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
++VL VC+ +A++ GKQ+HA +K + ++L+DMY KCG + D +F+ P
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+RD V+W+ +I +G ++AI F+EM +KPN F+ VL AC H G V++
Sbjct: 605 KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLH 664
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F M YGL+P +EHY CMVDLLG++G ++A +LI MPF+ D IW ++L C+
Sbjct: 665 YFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQ 724
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N ++ LL P+D S YV+L+NVYA +GMW ++K+R K +K+ G SW
Sbjct: 725 GNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSW 784
Query: 664 IEV 666
IEV
Sbjct: 785 IEV 787
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 215/452 (47%), Gaps = 34/452 (7%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ GKQVH + GF L+ Y K +++ +F+ MP+RDV+SW +I G
Sbjct: 22 LNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFG 81
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y+ + A+ LFD +V WNS++S Y+ N N
Sbjct: 82 ---------------YAGIGNMGFAQSLFDSMPE------RDVVSWNSLLSCYLHNGVNR 120
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
++I + + S + D TF LKAC + ++ LQVH L + G+E D + GS
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYG--LGLQVHCLAIQMGFENDVVTGSA 178
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+Y++ + A +F +P++++V WS +I G ++ LF+DM+ V+
Sbjct: 179 LVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
Q +SV + C+ L++ + G Q+H +K F + I T+ +DMY KC + D +F
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFN 298
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC----RHAG 537
+P S+ IIVG + + +A+ FQ + ++ L +EI+ G L+AC RH
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE 358
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
++ + + GL ++ ++D+ G+ G +A + EM + D W ++
Sbjct: 359 GIQ-----LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAI 412
Query: 598 LKACETHNN-TKLVSIIAEQLLATSPEDPSKY 628
+ A E + K +S+ L +T D Y
Sbjct: 413 IAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 146/645 (22%), Positives = 259/645 (40%), Gaps = 142/645 (22%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS 165
+S +L+ CS L+ G+ +H ++ + N LL Y K + K+FD+
Sbjct: 9 FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68
Query: 166 -----NWAASAYG--------------------NVALWNSMLS-------GGKQVHAF-- 191
+W +G +V WNS+LS K + F
Sbjct: 69 QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 192 -----------------------------------CVKRGFEKEDVTLTSLIDMYLKCGE 216
++ GFE + VT ++L+DMY KC +
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 217 IDDGLALFNFMPERDVVSWTGIIVG----------------------------------- 241
+DD +F MPER++V W+ +I G
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 242 CFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
C S F L +A +DMY+ C + +A K+F+ + +Y
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
N++I GY +Q +A+ + + + + D + + AL AC + +
Sbjct: 309 ------NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE--GI 360
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+HGL V G + V + ++D+Y + G + A +F + ++D V+W+ +I ++
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNE 420
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LF M+ S + + F SV+K C+ +L G ++H +K G + +
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DMY KCG + + + + E+ VSW II G +++ A YF +M++ + P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAE 579
+ T+ VL C + +E I + L+ H + Y +VD+ + G D+
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQI---LKLQLHSDVYIASTLVDMYSKCGNMQDSR 597
Query: 580 QLIAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAE-QLLATSP 622
+ + P K D W++M+ A H K +++ E QLL P
Sbjct: 598 LMFEKAP-KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKP 641
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 180/463 (38%), Gaps = 104/463 (22%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +G LH +K GL +I N +L MY +L +A +F+EM R++
Sbjct: 346 ALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRD 405
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ A+ N+ + L+ ML ++EP+ F Y +V+KAC+ L+ G IH
Sbjct: 406 AVSWNAIIAAHEQNEEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGTEIH 464
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
RI + + D + + L+DMY KCG L + A WNS++SG
Sbjct: 465 GRIIKSGMGLDWFVGSALVDMYGKCG----MLMEAEKIHARLEEKTTVSWNSIISGFSSQ 520
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
GKQ+HA +K +
Sbjct: 521 KQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIA 580
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
++L+DMY KCG + D +F P+RD V+W+ +I
Sbjct: 581 STLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMIC------------------------ 616
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y + E+AI L + + + F S
Sbjct: 617 ----------------------------AYAYHGLGEKAINLFEEMQLLNVKPNHTIFIS 648
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
L+AC + + + + ++ G + S ++DL R G V AL+L +P
Sbjct: 649 VLRACAH-MGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPF 707
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN-QDVNQFII 425
+ D V W L+ C G +A F ++ + QD + +++
Sbjct: 708 EADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVL 750
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 35/249 (14%)
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF+ L+ C NL N QVH ++ +G+ V + L+ Y + + A ++F
Sbjct: 8 TFSHILQKCSNLKALNP--GKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLF-----RDMINSN-------------QDVNQ 422
R+P++DV++W+ LI G G A LF RD+++ N + +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 423 FI-------------ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F+ + +LK CS + G QVH ++ GFE + +T ++L+DMY K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
C ++DD +F+ MPER++V W+ +I G QN R E + F++M++ + ++ T+ V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 530 LSACRHAGL 538
+C AGL
Sbjct: 246 FRSC--AGL 252
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/685 (31%), Positives = 351/685 (51%), Gaps = 53/685 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L L+ C +++S++ GK +H II G+S D G L+ MY + L K+
Sbjct: 92 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKI 151
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD++ + W +++ Y ++ L+ M + G V N + ++ VLK + G
Sbjct: 152 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV-GNCYTFTCVLKCFAALGK 210
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
+ + +H + + +T ++N+L+ Y K G + LFD+ S +V W
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE------PDVVSW 264
Query: 179 NSMLSGGKQVHAFCVKRGFEKE-------------DVTLTSLIDMYLKCGEIDD---GLA 222
NSM++G CV GF +V LT+L+ + + C I + G A
Sbjct: 265 NSMING-------CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
L F + CF + L+DMYS C L A ++F +
Sbjct: 318 LHGFG-----------VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTT----- 361
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+ W S+I+ YV +AI L + S G+ D YT TS + AC + +
Sbjct: 362 -IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK--GRD 418
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
VH ++ +G + V + LI++YA+ G+V+ A +F ++P KD+V+W+ +I G +++ L
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ A LF DM + + ++ VL C+ LA+L +G+++H ++RG+ + +
Sbjct: 479 PNEALELFLDMQKQFKP-DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACA 537
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+DMY KCG + LF +P++D++SWT +I G G +G EAI+ F EM + ++P+
Sbjct: 538 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPD 597
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
E +F +L+AC H+GL+ E W F SM+ E G+EP LEHY C+VDLL + G A + I
Sbjct: 598 ESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFI 657
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MP KPD TIW +L C H++ KL +AE + P++ YV+L+NVYA W+
Sbjct: 658 ESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWE 717
Query: 643 SLSKVRKAGKKLGEKK-AGMSWIEV 666
+ K+RK +K G K+ G SWIEV
Sbjct: 718 EVKKLRKRMQKRGFKQNPGCSWIEV 742
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 214/637 (33%), Positives = 325/637 (51%), Gaps = 45/637 (7%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA--IRLYNHMLEYGSVEPNGFMYSAV 111
L+ AH LFD++ ++ ++ ++ AY+S+ A + LY ML + V PN + +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRH-RVAPNNYTFPFA 131
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA 171
LKACS D GR IH L+ D + LLDMYVKC L D +A
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP----DAAHIFATMP 187
Query: 172 YGNVALWNSMLSG----GKQVHAFC-------VKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
++ WN+ML+G G HA TL +L+ + + G + G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
Query: 221 LALFNFM------PERDVVS--WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
++ + R+ S G+++G +AL+DMY+ C L AR++FD
Sbjct: 248 TSVHAYRIRACLHSNRNSKSKLTDGVLLG---------TALLDMYAKCGSLLYARRVFD- 297
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACIN 331
A N W+++I G+VL + +A L + + G+C S T SAL+AC +
Sbjct: 298 -----AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 352
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + R Q+H L+ SG D G++L+ +YA+ G + A+ LF + KD V++S
Sbjct: 353 LDHL--RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ G ++G A+L+F+ M N + + + S++ CS LA+L+ G+ H + R
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G E +LIDMY KCG ID +F MP RD+VSW +I G G +G KEA A F
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 530
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
EM P+ +TF+ +LSAC H+GLV E F M+ YGL P +EHY CMVDLL +
Sbjct: 531 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSR 590
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G D+A + I MP + D +W ++L AC + N L ++ + PE +V+L
Sbjct: 591 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
SN+Y+ G +D ++VR K G KK+ G SWIE++
Sbjct: 651 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 687
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 198/500 (39%), Gaps = 121/500 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C G+++H I GL D+F LL MY L DA +F M ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 69 IVSWTTMVTAYTSNKRPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+V+W M+ Y + + A+ L + ++ + PN A+L + G L G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 128 H----------ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAAS 170
H R ++ KL +L LLDMY KCGSL R++FD W+A
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 171 AYGNV---------ALWNSMLSG-------------------------GKQVHAFCVKRG 196
G V L+ +ML+ G+Q+HA K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------ 244
+ SL+ MY K G ID +ALF+ M +D VS++ ++ G +
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 245 ------------------CSCFTLSAL-------------------------VDMYSNCN 261
+C L+AL +DMY+ C
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +R++F+ S ++ WN+MI+GY ++ +EA L +++ G D T
Sbjct: 491 RIDLSRQVFNMMPSR------DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 544
Query: 322 FTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F L AC + ++ F + HG +T E YI ++DL +R G + A E
Sbjct: 545 FICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRME-HYIC---MVDLLSRGGFLDEAYEF 600
Query: 379 FHRLP-KKDVVAWSGLIMGC 397
+P + DV W L+ C
Sbjct: 601 IQSMPLRADVRVWVALLGAC 620
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I ALR C ++ G+ LH + K G+ D+ GN+LLSMYA ++ A LFDEMA
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VS++ +V+ Y N R A ++ M + +VEP+ +++ ACS L GR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N L+DMY KCG L+R++F+ + ++ WN+M++
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR------DIVSWNTMIA 515
Query: 184 G------GKQVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G GK+ A ++ GF + VT L+ G + +G F+ M
Sbjct: 516 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C +++ G+ H +I GL+ + N L+ MYA ++ + ++F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ M ++IVSW TM+ Y + A L+ M G P+G + +L ACS SG
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSHSG 556
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 352/673 (52%), Gaps = 47/673 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G +H R+IK G D +LL MY + + L+DA K FD M +++
Sbjct: 107 LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDV 166
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W+++V + N + + + +++ M+ +VEP+ +V +ACS G L LGR +H
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISE-AVEPDSVTMLSVTEACSELGSLRLGRSVHG 225
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY-----SNWAA--SAYGNVALWNS 180
+ R ++E + L N+L+ MY K G L +LF+ + W S Y +
Sbjct: 226 YVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM------PERDVVS 234
L+ ++ F E VT+ ++ + G + +G ++ F+ PE D
Sbjct: 286 ALNVFAKMQEF----KMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELD--- 338
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
F AL+++Y++ L + K+F+ + WN++IS +
Sbjct: 339 -------------FLGPALMELYADTGNLRDCHKVFETIKE------KTILSWNTLISIF 379
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N Q EEA+ L + + G+ DSY+ S+L AC ++F S+ Q+HG I+ +G
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSAC-GTISF-SQLGAQIHGYIIKTGNFN 437
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D++ + LID+YA+ G V SA ++F ++ +K +V W+ +I G +++G + A LF M
Sbjct: 438 DFVQNA-LIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 496
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ +++ SV++ CS L L +GK VH + G K+ T+L DMY KCGE+
Sbjct: 497 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 556
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F M ER +VSW+ +I G G +G+ I+ F +M+ S +KPN+ITF+ +LSAC
Sbjct: 557 MAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS 616
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAG VEE F SM E+G+EP +H+ CMVDLL +AG + A Q+I +PF + +IW
Sbjct: 617 HAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIW 675
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L C H ++ I + LL D Y +LSN+YA G WD KVR K
Sbjct: 676 GALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSK 735
Query: 655 GEKK-AGMSWIEV 666
G +K G S IE+
Sbjct: 736 GLRKVPGYSTIEI 748
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 34/294 (11%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H + +G + LI+ YA++G +S+ +F PK D W LI G
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 402 LNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
A L+ +M+ +Q ++ F+ SVLK CS L G +VH +K GFE + +
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
TSL+ MY + +DD F MP RDVV+W+ I++ QNG+A E + F +MI ++
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 521 PNEITFLGVLSACRHAG----------------------LVEEAWTIFTSMKPEYGLEPH 558
P+ +T L V AC G L ++ + Y E
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 559 LEHYYC--------MVDLLGQAGCFDDAEQLIAEM---PFKPDKTIWASMLKAC 601
E+ C M+ Q+GCF +A + A+M +P++ +L AC
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC 312
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 179/450 (39%), Gaps = 124/450 (27%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEM 64
+V L C + +K+G+S+H +I+ + ++ F G L+ +YAD +L D HK+F+ +
Sbjct: 305 MVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETI 364
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
K I+SW T+++ +T N +P A+ L+ M G + P+ + ++ L AC LG
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG-LMPDSYSLASSLSACGTISFSQLG 423
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
IH I + ++ + N L+DMY KCG + K+F++ ++ WNSM+
Sbjct: 424 AQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKE------KSLVTWNSMI 476
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
G GK VH + G
Sbjct: 477 CGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR 536
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
K+ T+L DMY KCGE+ +F+ M ER +VSW+ +I G
Sbjct: 537 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAG----------------- 579
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
Y ++ Q I+L + + SG+ +
Sbjct: 580 -----------------------------------YGMHGQINATISLFNQMLGSGIKPN 604
Query: 319 SYTFTSALKACINL-------LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
TF L AC + L FNS + G E + + ++DL +R G+
Sbjct: 605 DITFMHILSACSHAGAVEEGKLYFNS---------MSEFGVEPKHDHFACMVDLLSRAGD 655
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ A ++ LP + W L+ GC H
Sbjct: 656 LNGAYQIITSLPFPANSSIWGALLNGCRIH 685
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + ++ C +++GK +H ++I YGL +D + L MY+ L AH +
Sbjct: 502 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 561
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M+ ++IVSW+ M+ Y + + N I L+N ML G ++PN + +L ACS +G
Sbjct: 562 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG-IKPNDITFMHILSACSHAGA 620
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
++ G+L ++ +E ++D+ + G L Y + + N ++W
Sbjct: 621 VEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLN----GAYQIITSLPFPANSSIWG 676
Query: 180 SMLSG 184
++L+G
Sbjct: 677 ALLNG 681
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 219/688 (31%), Positives = 356/688 (51%), Gaps = 60/688 (8%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR + + C RS+ QG+ +H I+ D N++LSMY SL DA ++FD
Sbjct: 64 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 123
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +N+VS+T+++T Y+ N + AI LY ML+ V P+ F + +++KAC+ +GD+
Sbjct: 124 FMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLV-PDQFAFGSIIKACACAGDVV 182
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG----NVALW 178
LG+ +H ++ + + + N L+ MYV+ F+Q S+ + YG ++ W
Sbjct: 183 LGKQLHAQVIKLESSSHLIAQNALIAMYVR--------FNQMSDASKVFYGIPAKDLISW 234
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN---------FMPE 229
+S+++G Q+ GFE E L+ L +M L G +F P+
Sbjct: 235 SSIIAGFSQL-------GFEFE--ALSHLKEM-LSFGVFHPNEYIFGSSLKACSSLLRPD 284
Query: 230 RDV--------VSWTG-IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+ TG I GC +L DMY+ C L AR++F+Q
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGC---------SLCDMYARCGFLDSARRVFNQIER----- 330
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
+ A WN +I+G N +EA+++ S + +SG D+ + S L A +
Sbjct: 331 -PDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQ--G 387
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTK 399
+Q+H I+ G+ D V ++L+ +Y ++ LF K D V+W+ ++ C +
Sbjct: 388 MQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQ 447
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
H LF+ M+ S + + + ++L+ C ++SL+ G QVH + K G E
Sbjct: 448 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFI 507
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
LIDMY KCG + +F M DVVSW+ +IVG Q+G +EA+ F+EM S +
Sbjct: 508 KNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGI 567
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+PN +TF+GVL+AC H GLVEE ++ M+ E+G+ P EH C+VDLL +AG ++AE
Sbjct: 568 EPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAE 627
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ I EM +PD +W ++L AC+T N L AE +L P + + +V+L +++A+ G
Sbjct: 628 RFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSG 687
Query: 640 MWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
W+ + +R + KK KK G SWI+V
Sbjct: 688 NWEDAALLRSSMKKHDVKKIPGQSWIDV 715
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 340/657 (51%), Gaps = 44/657 (6%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
HC+ IK G S DI+ NN+LS Y +S L A LFDEM+ ++ V+W TM++ Y ++
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A LY M +G + P+ + + ++LK + + LD+G+ +H I + E
Sbjct: 82 SLGSAWELYKSMKSFG-LMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAG 140
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEK 199
+ LLDMY KC ++ D + + N WN++++G G AF + R E+
Sbjct: 141 SALLDMYAKC----ERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEE 196
Query: 200 EDVTLTSLIDMYLKCGEIDDGL--ALFNFMPERDVVSWT-----GIIVGCFECSCFTLSA 252
E V L DDG L + E+ T II + +A
Sbjct: 197 EGVRL-------------DDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNA 243
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+ YS C L +A ++FD A ++ WNSM++ ++ +++ E A L +
Sbjct: 244 TITSYSQCGSLEDAERVFD-----GAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQ 298
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY--ARLG 370
G D YT+T+ + AC + N S +HGL++ G E + + +I +Y +
Sbjct: 299 FGFEPDIYTYTTIISACSHKDNGKS-----LHGLVIKRGLEQLVPICNAVIAMYLESSSN 353
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+++ AL +FH + KD V+W+ ++ G ++ G + A LF M + D++ + S+VL+
Sbjct: 354 SMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLR 413
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS LA+L+ G+Q+H VK GFE D +SLI MY KCG I+D F+ + ++
Sbjct: 414 SCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSIT 473
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W I+ Q+G+ A+ F +M ++K + ITF+ L+AC H GLVE+ + SM
Sbjct: 474 WNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMA 533
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+YG+ P +EHY C VDL G+AG D+A+ LI MPF PD +W ++L AC + +L
Sbjct: 534 SDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELA 593
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
+ +A LL PE+ YV+LSN+Y L WD + + + ++ KK G SWIEV
Sbjct: 594 AQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEV 650
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 235/517 (45%), Gaps = 45/517 (8%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H I+K G + ++ G+ LL MYA + DA +F + R+N VSW ++ +
Sbjct: 121 GQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVL 180
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A L M E G +G +S +L L +H +I + +++D
Sbjct: 181 EGDHDTAFWLLRCMEEEGVRLDDG-TFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNT 239
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-- 193
+ N + Y +CGSL ++FD A ++ WNSML+ ++ AF +
Sbjct: 240 VCNATITSYSQCGSLEDAERVFD-----GAVGSRDLVTWNSMLAAFLAHDRKETAFKLFL 294
Query: 194 ---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ GFE + T T++I C D+G +L + +R + I
Sbjct: 295 DMQQFGFEPDIYTYTTIIS---ACSHKDNGKSLHGLVIKRGLEQLVPIC----------- 340
Query: 251 SALVDMY--SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+A++ MY S+ N + +A +F S + WNS+++G+ +E A+ L
Sbjct: 341 NAVIAMYLESSSNSMEDALNVFHSMES------KDRVSWNSILTGFSQTGHSENALKLFV 394
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
H+ + + ID Y F++ L++C +L + Q+H L V SG+E + V S+LI +Y++
Sbjct: 395 HMRFAVVDIDHYAFSAVLRSCSDLATL--QLGQQIHVLTVKSGFESNDFVASSLIFMYSK 452
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G ++ A + F + K + W+ ++ +HG +A LF M + ++ +
Sbjct: 453 CGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAA 512
Query: 429 LKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ER 486
L CS + + +G+ + + G +D++ + G +D+ AL + MP +
Sbjct: 513 LTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDP 572
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
D + W ++ C G + A +++ L+P E
Sbjct: 573 DAMVWKTLLGACRACGDIELAAQVASHLLE--LEPEE 607
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 170/444 (38%), Gaps = 117/444 (26%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD-EMARKNIVSWT 73
+++ K LHC+IIK+G+ D N ++ Y+ SL DA ++FD + +++V+W
Sbjct: 215 EKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWN 274
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
+M+ A+ ++ R A +L+ M ++G EP+ + Y+ ++ ACS D G+ +H + +
Sbjct: 275 SMLAAFLAHDRKETAFKLFLDMQQFG-FEPDIYTYTTIISACSHK---DNGKSLHGLVIK 330
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--------- 184
LE + N ++ MY++ S + + D + + + + WNS+L+G
Sbjct: 331 RGLEQLVPICNAVIAMYLE--SSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSEN 388
Query: 185 -----------------------------------GKQVHAFCVKRGFEKEDVTLTSLID 209
G+Q+H VK GFE D +SLI
Sbjct: 389 ALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIF 448
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG I+D F + ++W I+
Sbjct: 449 MYSKCGMIEDARKSFEKTAKDSSITWNSIMF----------------------------- 479
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Y + Q + A+ L + + +D TF +AL AC
Sbjct: 480 -----------------------AYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTAC 516
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP 383
S L G + DY + + +DL+ R G + A L +P
Sbjct: 517 -------SHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMP 569
Query: 384 -KKDVVAWSGLIMGCTKHGLNSLA 406
D + W L+ C G LA
Sbjct: 570 FDPDAMVWKTLLGACRACGDIELA 593
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C +++ G+ +H +K G + F ++L+ MY+ + DA K F++ A+ +
Sbjct: 412 LRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSS 471
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++W +++ AY + + + A+ L+ M + V+ + + A L ACS G ++ GR +
Sbjct: 472 ITWNSIMFAYAQHGQGDVALGLFFQMRD-KKVKMDHITFVAALTACSHIGLVEQGRYL 528
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 223/763 (29%), Positives = 365/763 (47%), Gaps = 108/763 (14%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD- 62
RR+ L+ C ++QGK +H +I +S D +T +L MYA S +D K+F
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 63 -EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL---- 117
++ R +I W ++++++ N N A+ Y ML +G V P+ + ++KAC
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNF 154
Query: 118 -----------SGDLDLGRLIHERITREKLEY----------------DTVLMNTLLDMY 150
S +D + + + LEY D V+ N +L+ Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 151 VKCGSLTRKL-------FDQYSNWAASAYGNVALWNS--MLSGGKQVHAFCVKRGFEKED 201
KCG+L + DQ S A + +++ S ++ G Q+H V G + E
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------------- 241
SL+ MY KCG DD LF M D V+W +I G
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 242 ------------------------CFECSCFTL-----------SALVDMYSNCNVLCEA 266
C + C+ + SAL+D Y C + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ +F Q +S +V ++ +MISGY+ N +++ + + + + T S L
Sbjct: 395 QNIFSQCNSV------DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
LL + ++HG I+ G++ +G +ID+YA+ G + A E+F RL K+D
Sbjct: 449 PVIGILLAL--KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ +I C + S A +FR M S + IS+ L C+ L S GK +H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
F +K + + ++LIDMY KCG + + +FK M E+++VSW II CG +G+ K+
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 507 AIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
++ F EM++ S ++P++ITFL ++S+C H G V+E F SM +YG++P EHY C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VDL G+AG +A + + MPF PD +W ++L AC H N +L + + +L+ P +
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
YV++SN +A W+S++KVR K+ +K G SWIE++
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C S GK++H +IK+ L+ D+++ + L+ MYA +L A +F
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M KNIVSW +++ A ++ + ++ L++ M+E + P+ + ++ +C GD+
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 122 DLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
D G +T + ++ ++D++ + G LT + Y + + + +W
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT----EAYETVKSMPFPPDAGVWG 716
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
++L G ++H + E +V + L+D+
Sbjct: 717 TLL-GACRLH-----KNVELAEVASSKLMDL 741
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 214/682 (31%), Positives = 347/682 (50%), Gaps = 45/682 (6%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L+R V ++ R+ +Q +S + +S L + + A +FD
Sbjct: 6 LKREVVSILLINWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFD 65
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++ + ++V W M+ Y + +I LY HML+ G V P F + +LKACS L
Sbjct: 66 QIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-VTPTNFTFPFLLKACSSLQALQ 124
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LGRLIH L D + LL MY KCG L + LF+ S+ ++ WN+
Sbjct: 125 LGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR----DIVAWNA 180
Query: 181 MLSG-------GKQVHAFCV--KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M++ + +H+ + G TL S++ + + G A+ +
Sbjct: 181 MIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY---- 236
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
I F + +AL+DMY+ C++L ARK+F+ + N W++MI
Sbjct: 237 -------IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNK------KNDVCWSAMI 283
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCI-----DSYTFTSALKACINLLNFNSRFALQVHGL 346
GYVL++ +A+ L + +CI T + L+AC L + L H
Sbjct: 284 GGYVLHDSISDALAL----YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCH-- 337
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
++ SG +LD VG++LI +YA+ G + +A+ + KD V++S +I GC ++G A
Sbjct: 338 MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKA 397
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
L+FR M +S + ++L CS LA+L+ G H + V RGF + ++IDM
Sbjct: 398 LLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDM 457
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG+I +F M RD++SW +I+G G +G EA++ FQE+ LKP+++T
Sbjct: 458 YSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTL 517
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VLSAC H+GLV E F+SM + ++P + HY CMVDLL +AG D+A I MP
Sbjct: 518 IAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMP 577
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F P+ IW ++L AC TH N ++ +++++ PE +V++SN+Y+++G WD +
Sbjct: 578 FVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAY 637
Query: 647 VRKAGKKLGEKKA-GMSWIEVS 667
+R + G KK+ G SW+E+S
Sbjct: 638 IRSIQRHHGYKKSPGCSWVEIS 659
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/722 (29%), Positives = 350/722 (48%), Gaps = 81/722 (11%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S ++L +K GL D+F L+++YA F + +A LFD M +++V W M+
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVL----KACSLSGDLDLGRLIHERITR 133
AY + + L++ G + P+ +L K +L+ R ++
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSG-LRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFV 255
Query: 134 EKLEYDTVLMNTLLDMYVKCGS------LTRKLFDQYSNWAASAY----GNVALWNSMLS 183
+ D + N L Y++ G R + + Y VA N L
Sbjct: 256 CDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH-LE 314
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
GKQ+H V+ G+++ S I+MY+K G ++ +F M E D++SW +I GC
Sbjct: 315 LGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCA 374
Query: 244 -----ECS---------------------------------------------------C 247
ECS
Sbjct: 375 RSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS 434
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F +AL+D+YS + EA LF + ++A WN+M+ G+ +++ EA+ L
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGF------DLASWNAMMHGFTVSDNYREALRLF 488
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S +H G D TF +A KA L+ Q+H +++ + D V S ++D+Y
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQ--GKQIHAVVIKMRFHYDLFVISGILDMYL 546
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G +KSA ++F+++P D VAW+ +I GC ++G A + M + +++ ++
Sbjct: 547 KCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFAT 606
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
++K CS L +L +GKQ+HA +K + +TSL+DMY KCG I+D LF+ M R
Sbjct: 607 LVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRS 666
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V W +IVG Q+G A+EA+ +F EM + P+ +TF+GVLSAC H+GL +A+ F
Sbjct: 667 VALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFD 726
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SM+ YG+EP +EHY C+VD L +AG +AE++++ MPF+ T++ ++L AC +
Sbjct: 727 SMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDK 786
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+ +AE+L P D + YV+LSN+YA W++ R K++ KK G SWI++
Sbjct: 787 ETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDM 846
Query: 667 SS 668
+
Sbjct: 847 KN 848
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 174/682 (25%), Positives = 295/682 (43%), Gaps = 100/682 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD--EMARK 67
LRH + GK H I+ GL+ D + NNL++MYA SL A KLFD + +
Sbjct: 20 LRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDR 79
Query: 68 NIVSWTTMVTAYTSN------KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++V++ ++ AY ++ + A ++ +L + S + K C L G
Sbjct: 80 DLVTYNAILAAYAHTGELHDVEKTHEAFHIF-RLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ + L++D + L+++Y K + R LFD+ +V LWN
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRM------PVRDVVLWN 192
Query: 180 SMLS------GGKQV----HAF--------CV-----------KRGFEKE---------- 200
M+ G +V AF CV K FE+E
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252
Query: 201 --------DVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVV--SWTGIIVGCFECSCFT 249
DVT+ + YL+ GE + + F M + V S T I++ S
Sbjct: 253 LFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH 312
Query: 250 L----------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
L ++ ++MY + AR++F Q ++ W
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV------DLISW 366
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N++ISG + E ++ L + SG+ D +T TS L+AC +L + QVH
Sbjct: 367 NTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEE-SYCVGRQVHTCA 425
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G LD V + LID+Y++ G ++ A LFH D+ +W+ ++ G T A
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF M + +Q ++ K CL L++GKQ+HA +K F + ++ ++DMY
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY 545
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
LKCGE+ +F +P D V+WT +I GC +NG ++A+ + +M + ++P+E TF
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 528 GVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
++ AC +E+ I + MK +P + +VD+ + G +DA L M
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMN 663
Query: 587 FKPDKTIWASMLKACETHNNTK 608
+ +W +M+ H N +
Sbjct: 664 TR-SVALWNAMIVGLAQHGNAE 684
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 157/636 (24%), Positives = 272/636 (42%), Gaps = 99/636 (15%)
Query: 100 SVEPNGFM--YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
SV P+ + + ++L+ DL LG+ H I L D + N L+ MY KCGSL
Sbjct: 6 SVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLF 65
Query: 157 -TRKLFDQYS---------NWAASAYGNVA-----------------LWNSML------- 182
RKLFD N +AY + L S++
Sbjct: 66 SARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTL 125
Query: 183 -------------SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
S + + + VK G + + +L+++Y K I + LF+ MP
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 230 RDVVSWTGI------------IVGCFECSCFTLSAL-VDMYSNCNVLCEARKL------F 270
RDVV W + ++G F S F S L D S +L K
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLF--SAFHRSGLRPDCVSVRTILMGVGKKTVFEREL 243
Query: 271 DQYSSWAASAY-----GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+Q ++A + +V +WN +S Y+ + EA+ + S + DS T+
Sbjct: 244 EQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVI 303
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L +L + Q+HG +V G++ V ++ I++Y + G+V A +F ++ +
Sbjct: 304 LSVVASLNHLE--LGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL-ASLRRGKQV 444
D+++W+ +I GC + GL + LF D++ S +QF I+SVL+ CS L S G+QV
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H +K G + T+LID+Y K G++++ LF D+ SW ++ G +
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV------EEAWTIFTSMKPEYGLEPH 558
+EA+ F M + K ++ITF +A + AG + ++ + M+ Y L
Sbjct: 482 REALRLFSLMHERGEKADQITF---ANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV- 537
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
++D+ + G A ++ ++P PD W +++ C N + ++ +
Sbjct: 538 ---ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC-VENGEEEQALFTYHQM 592
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
+ P +Y +ATL SL + GK++
Sbjct: 593 RLAGVQPDEY-----TFATLVKACSLLTALEQGKQI 623
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 207/499 (41%), Gaps = 123/499 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V +L H ++ GK +H ++++G Q + N+ ++MY S+N A ++F +M
Sbjct: 306 VVASLNH------LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK 359
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLG 124
+++SW T+++ + ++RL+ +L G + P+ F ++VL+AC SL +G
Sbjct: 360 EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVG 418
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSML 182
R +H + + D+ + L+D+Y K G + LF + ++A WN+M+
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGF------DLASWNAMM 472
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
G GKQ+HA +K F
Sbjct: 473 HGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFH 532
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------- 244
+ ++ ++DMYLKCGE+ +FN +P D V+WT +I GC E
Sbjct: 533 YDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQM 592
Query: 245 ------------------CSCFT-----------------------LSALVDMYSNCNVL 263
CS T +++LVDMY+ C +
Sbjct: 593 RLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNI 652
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+A LF + ++ + VALWN+MI G + EEA+ + + S G+ D TF
Sbjct: 653 EDAYGLFRRMNTRS------VALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFI 706
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
L AC + S + T G E + S L+D +R G+++ A ++ +P
Sbjct: 707 GVLSACSH-SGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765
Query: 384 -KKDVVAWSGLIMGCTKHG 401
+ + L+ C G
Sbjct: 766 FEASATMYRTLLNACRVQG 784
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 333/647 (51%), Gaps = 42/647 (6%)
Query: 38 IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
+F N LL+ Y A +L DEM R+N VS+ ++ AY+ ++
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
G V+ + F Y+A L ACS +G L GR +H + L + N+L+ MY KCG +
Sbjct: 103 AG-VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 157 -TRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKEDVTLTS 206
R++FD A +V+ WNS++SG + V F + R G L S
Sbjct: 162 EARRVFD-----VAEERDDVS-WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGS 215
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+I C DG M + V I G + F +SA++DMY+ L EA
Sbjct: 216 VIKC---CSGRGDGT-----MDIAEAVHGCVIKAG-LDSDVFLVSAMIDMYAKKGALVEA 266
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGY------VLNEQNEEAITLLSHIHSSGMCIDSY 320
LF NV ++N+MI+G+ + E EA+TL S + S GM +
Sbjct: 267 AALFRSVQE------PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEF 320
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF+S L+AC NL + F Q+HG ++ ++ D +GS LIDLY G ++ F
Sbjct: 321 TFSSVLRAC-NLAGY-LEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFR 378
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
PK D+V W+ ++ GC ++ L+ A LF + + + + F ISSV+ C+ LA R
Sbjct: 379 SSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q+ F K GF++ + S + MY + G++D F+ M DVVSW+ +I Q
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G A++A+ +F EM+ +++ PNEITFLGVL+AC H GLV+E + +M +YGL P ++
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIK 558
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H C+VDLLG+AG DAE I+ F D IW S+L +C H + + ++A +++
Sbjct: 559 HCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL 618
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P + YV+L N+Y G SK R K+ G KK G+SWIE+
Sbjct: 619 EPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIEL 665
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 226/540 (41%), Gaps = 113/540 (20%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + ++ G+++H I GLS +F N+L+SMY+ + +A ++FD ++ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHER 130
++V+ Y +R++ M+ G + N F +V+K CS GD +D+ +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFA-MMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ + L+ D L++ ++DMY K G+L + + + + NV ++N+M++G
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALV----EAAALFRSVQEPNVVMFNTMIAGFCRTET 293
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
GKQ+H +K F+++
Sbjct: 294 VIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
D ++LID+Y G ++DG F P+ D+V+WT ++ GC
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGC------------------ 395
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
V NE +E+A++L +G+ D +
Sbjct: 396 ----------------------------------VQNELHEKALSLFHESLGAGLKPDLF 421
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T +S + AC +L +R Q+ SG++ ++G++ + +YAR G+V +A F
Sbjct: 422 TISSVMNACASLA--VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQ 479
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ DVV+WS +I +HG A F +M+++ N+ VL CS +
Sbjct: 480 EMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539
Query: 441 GKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGC 498
G + + K G T ++D+ + G + D A + D V W ++ C
Sbjct: 540 GLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASC 599
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I + C + G+ + C K G + GN+ + MYA ++ A + F
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM ++VSW+ +++ + + A+ ++ M++ V PN + VL ACS G +
Sbjct: 479 QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITFLGVLTACSHGGLV 537
Query: 122 DLGRLIHERITREKLEYDTVLMNT-LLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
D G +E +T++ T+ T ++D+ + G +L D + + S + + +W
Sbjct: 538 DEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAG----RLADAEAFISNSIFHADPVIWR 593
Query: 180 SMLSGGKQVH------AFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPER 230
S+L+ + +H R E E + S L +MYL GE+ + M +R
Sbjct: 594 SLLASCR-IHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQR 652
Query: 231 DVVSWTGI 238
V G+
Sbjct: 653 GVKKEPGL 660
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 333/647 (51%), Gaps = 42/647 (6%)
Query: 38 IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
+F N LL+ Y A +L DEM R+N VS+ ++ AY+ ++
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
G V+ + F Y+A L ACS +G L GR +H + L + N+L+ MY KCG +
Sbjct: 103 AG-VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 157 -TRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKEDVTLTS 206
R++FD A +V+ WNS++SG + V F + R G L S
Sbjct: 162 EARRVFD-----VAEERDDVS-WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGS 215
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+I C DG M + V I G + F +SA++DMY+ L EA
Sbjct: 216 VIKC---CSGRGDGT-----MDIAEAVHGCVIKAG-LDSDVFLVSAMIDMYAKKGALVEA 266
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGY------VLNEQNEEAITLLSHIHSSGMCIDSY 320
LF NV ++N+MI+G+ + E EA+TL S + S GM +
Sbjct: 267 AALFRSVQE------PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEF 320
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF+S L+AC NL + F Q+HG ++ ++ D +GS LIDLY G ++ F
Sbjct: 321 TFSSVLRAC-NLAGY-LEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFR 378
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
PK D+V W+ ++ GC ++ L+ A LF + + + + F ISSV+ C+ LA R
Sbjct: 379 SSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q+ F K GF++ + S + MY + G++D F+ M DVVSW+ +I Q
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G A++A+ +F EM+ +++ PNEITFLGVL+AC H GLV+E + +M +YGL P ++
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIK 558
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H C+VDLLG+AG DAE I+ F D IW S+L +C H + + ++A +++
Sbjct: 559 HCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL 618
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P + YV+L N+Y G SK R K+ G KK G+SWIE+
Sbjct: 619 EPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIEL 665
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 226/540 (41%), Gaps = 113/540 (20%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + ++ G+++H I GLS +F N+L+SMY+ + +A ++FD ++ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHER 130
++V+ Y +R++ M+ G + N F +V+K CS GD +D+ +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFA-MMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ + L+ D L++ ++DMY K G+L + + + + NV ++N+M++G
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALV----EAAALFRSVQEPNVVMFNTMIAGFCRTET 293
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
GKQ+H +K F+++
Sbjct: 294 VIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
D ++LID+Y G ++DG F P+ D+V+WT ++ GC
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGC------------------ 395
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
V NE +E+A++L +G+ D +
Sbjct: 396 ----------------------------------VQNELHEKALSLFHESLGAGLKPDLF 421
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T +S + AC +L +R Q+ SG++ ++G++ + +YAR G+V +A F
Sbjct: 422 TISSVMNACASLA--VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQ 479
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ DVV+WS +I +HG A F +M+++ N+ VL CS +
Sbjct: 480 EMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539
Query: 441 GKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGC 498
G + + K G T ++D+ + G + D A + D V W ++ C
Sbjct: 540 GLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASC 599
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I + C + G+ + C K G + GN+ + MYA ++ A + F
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM ++VSW+ +++ + + A+ ++ M++ V PN + VL ACS G +
Sbjct: 479 QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITFLGVLTACSHGGLV 537
Query: 122 DLGRLIHERITREKLEYDTVLMNT-LLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
D G +E + ++ T+ T ++D+ + G +L D + + + + +W
Sbjct: 538 DEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAG----RLADAEAFISNGIFHADPVIWR 593
Query: 180 SMLSGGKQVH------AFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPER 230
S+L+ + +H R E E + S L +MYL GE+ + M +R
Sbjct: 594 SLLASCR-IHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQR 652
Query: 231 DVVSWTGI 238
V G+
Sbjct: 653 GVKKEPGL 660
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 338/671 (50%), Gaps = 46/671 (6%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C Q SLHC I+K G S +F + L+SMY+ + +A LFD+M ++ VSW
Sbjct: 51 CAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSW 110
Query: 73 TTMVTAYTSNKRPNWAIRLYNHML---EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+M+ Y+ A L+ M+ E + + F + VLKAC G +G+ +H
Sbjct: 111 NSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHG 170
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + D + + + MY KCG L FDQ N ++ WN+M++G Q
Sbjct: 171 YAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIEN------KDIVAWNTMITGYAQ 224
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+E+E + L M L+ + +D F + + + CF
Sbjct: 225 -------NCYEEEAIEL--FYQMELEGFKPND--TTFCCVLKASTAMSDSAVGRCFHAKV 273
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSW-----AASAYG-----NVALWNSMISGYVLN 297
L +D++ A L D YS + A+G N+ +N++I+GY L
Sbjct: 274 LKLGCSMDVFV-------ATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLM 326
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA--LQVHGLIVTSGYELD 355
+ EEA+ + S + S GM DS+TF +C + +S A QVH V G + D
Sbjct: 327 GKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC----SVSSTVAEGAQVHVHSVKFGLDSD 382
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VG+++++ Y++ G SALE F + + + V W+G+I G ++G A + F M
Sbjct: 383 VSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRK 442
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++F SSV+K S A++ +G+ +HA +K G + +++IDMY KCG ++D
Sbjct: 443 FIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVED 502
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F MPE++VVSW +I G QNG KEA+ FQEM S + P +TF+G+L AC H
Sbjct: 503 AQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSH 562
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGLVEE + M YG+ P +EH CMVDLLG+AG ++AE + F + IW
Sbjct: 563 AGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWG 622
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
S+L AC H N+ + S A+ L P S Y LSN+YA+ +W +S++R K +G
Sbjct: 623 SLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMG 682
Query: 656 -EKKAGMSWIE 665
EK+ G SWIE
Sbjct: 683 VEKEPGCSWIE 693
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 185/496 (37%), Gaps = 114/496 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ CG + GK +H +K G D+F + + MY L+ A FD++
Sbjct: 149 LATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIE 208
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+IV+W TM+T Y N AI L+ M E +PN + VLKA + D +GR
Sbjct: 209 NKDIVAWNTMITGYAQNCYEEEAIELFYQM-ELEGFKPNDTTFCCVLKASTAMSDSAVGR 267
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVK----------CGSLTRK-------LFDQYS--- 165
H ++ + D + L+DMY K G ++++ L YS
Sbjct: 268 CFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMG 327
Query: 166 ---------------NWAASAYGNVALW-----NSMLSGGKQVHAFCVKRGFEKEDVTLT 205
++ V L+ +S ++ G QVH VK G + +
Sbjct: 328 KYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGN 387
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
S+++ Y KCG D L F + + V W GII G F + AL+ C+
Sbjct: 388 SIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISG-FAQNGEGEKALMQ-------FCK 439
Query: 266 ARKLFDQ------------YSSWAASAYG------------------------------- 282
RK D+ SSWAA G
Sbjct: 440 MRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGM 499
Query: 283 --------------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
NV WNSMI+GY N +EA+ L + SSG+ + TF L A
Sbjct: 500 VEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFA 559
Query: 329 C--INLLNFNSRF-ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE-LFHRLPK 384
C L+ F L VH + E + ++DL R G ++ A L
Sbjct: 560 CSHAGLVEEGRNFYNLMVHNYGIPPSMEH----CTCMVDLLGRAGYLEEAEAFLLSSSFS 615
Query: 385 KDVVAWSGLIMGCTKH 400
K+ W L+ C H
Sbjct: 616 KEPGIWGSLLSACGVH 631
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 37/254 (14%)
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ +VV W+ I + GL A F M+ + + N S+ + C+
Sbjct: 3 ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H +K+GF + + LI MY K I + LF MPERD VSW +I G Q G
Sbjct: 63 LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122
Query: 504 AKEAIAYFQEMIQS----RLKPNEITFLGVLSA-----CRHAGLVEEAWTIFTSMKPEYG 554
+EA F MI S +L ++ T VL A C G + + +
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182
Query: 555 LEPHLEHYYCMVDLLGQAG------------------------CF-DDAEQLIAEMP--- 586
+ + YC +L AG C+ ++A +L +M
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242
Query: 587 FKPDKTIWASMLKA 600
FKP+ T + +LKA
Sbjct: 243 FKPNDTTFCCVLKA 256
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M E +VV WT I + G +A++ F +M+++ ++PN IT+ +SAC + A
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
T + + G L ++ + + +A L +MP + D + W SM+
Sbjct: 61 -TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVS-WNSMI 114
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 221/712 (31%), Positives = 357/712 (50%), Gaps = 81/712 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHK 59
+DL + L C SI +G+ LH +K G+ + + GN LL MY+ S+ +A +
Sbjct: 4 LDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LF+EM ++N SW TM+ Y + ++ L++ M + F ++ V+ + G
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM-----PHKDAFSWNVVISGFAKEG 118
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK---LFDQYS-NWAASAYGNV 175
+L++ R R+ E + + N+++ Y C ++ LF S N G+
Sbjct: 119 NLEVAR----RLFNEMPWKNGIAWNSMIHGYA-CNGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 176 ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
+ +++ GKQ+HA V E + V +SL+++Y KCG+ID + N
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M E D F+LSAL+ Y++C + +AR++F + V L
Sbjct: 234 MKEPDA---------------FSLSALISGYASCGRMNDARRIF------CLKSNACVVL 272
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WNSMISGYV N + EA+ L +++ G+ D TF S L AC L + +QVH
Sbjct: 273 WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQ--GIQVHAH 330
Query: 347 IVTSGYELDYIVGSNLIDLYARL-------------------------------GNVKSA 375
+ G+ D I+ S L+D+Y++ G + A
Sbjct: 331 VYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDA 390
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F +P K +++W+ +I+G +++ A LF +M +++F ++ V+ C+ +
Sbjct: 391 RQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASI 450
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+SL G+Q+ A G E + I TSL+D Y KCG ++ G LF M + D V W ++
Sbjct: 451 SSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSML 510
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
+G NG EA+ F +M ++P +ITF+GVLSAC H GLVEE F +MK +Y +
Sbjct: 511 MGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHI 570
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P +EHY CMVDL +AG +DA LI +MP K D ++W+S+L+ C H N L +A+
Sbjct: 571 NPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAK 630
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA--GKKLGEKKAGMSWIE 665
+++ PE+ YV LS +YAT W ++VRK KK+ K G SW +
Sbjct: 631 RIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKI-PKVPGCSWAD 681
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 222/680 (32%), Positives = 351/680 (51%), Gaps = 48/680 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARK 67
LR C S+ Q ++H I + S +F N LL+ Y + + A +L DEM R+
Sbjct: 20 LRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N VS+ ++ AY+ + ++ + H V+ + F Y+A L ACS +G L G+++
Sbjct: 77 NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGG 185
H E L + N+L+ MY +CG + R++FD + + WNS++SG
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFD------VTEERDDVSWNSLVSGY 190
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-----ERDVVSWTGIIV 240
+V G +E + + +L+ +C + AL + + + V +
Sbjct: 191 LRV-------GAHEEMLRVFALMR---RCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVH 240
Query: 241 GC-----FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
GC + F SA+VDMY+ L EA LF NV ++N+MI+G
Sbjct: 241 GCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLD------PNVVVFNAMIAGLC 294
Query: 296 LNEQN------EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
+E EA++L S + S GM +TF+S ++AC NL + F Q+HG ++
Sbjct: 295 RDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRAC-NLAG-DIEFGKQIHGQVLK 352
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
++ D +GS LIDLY ++ F +PK+DVV W+ +I GC ++ L A L
Sbjct: 353 HCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALAL 412
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F +++ + F ISSV+ C+ LA +R G+Q+ F K GF++ S I MY +
Sbjct: 413 FHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYAR 472
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G ++ + F+ M DVVSW+ II Q+G A++A+ +F EM+ +++ PNEITFLGV
Sbjct: 473 SGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGV 532
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L+AC H GLV+E + MK EYGL P ++H C+VDLLG+AG DAE I + F
Sbjct: 533 LTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHD 592
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
+ +W S+L +C H + + ++A++++ P YV L N+Y G SK+R
Sbjct: 593 EPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRD 652
Query: 650 AGKKLGEKK-AGMSWIEVSS 668
K+ G KK G+SWIE+ S
Sbjct: 653 LMKERGVKKEPGLSWIELRS 672
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 17/244 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + C ++ G+ + C K G + GN+ + MYA ++ A + F EM
Sbjct: 428 ISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEME 487
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VSW+ +++++ + A++ +N M+ V PN + VL ACS G +D G
Sbjct: 488 SHDVVSWSAIISSHAQHGCARQALQFFNEMVG-AKVVPNEITFLGVLTACSHGGLVDEGL 546
Query: 126 LIHERITREKLEYDTVLMNT-LLDMYVKCGSLT-RKLFDQYSNWAASAYGNVALWNSMLS 183
+E + E TV T ++D+ + G L + F + S + + +W S+L
Sbjct: 547 RYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIF----HDEPVVWQSLL- 601
Query: 184 GGKQVH------AFCVKRGFEKEDVT---LTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G ++H R E + + +L +MYL GE+ G + + M ER V
Sbjct: 602 GSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKK 661
Query: 235 WTGI 238
G+
Sbjct: 662 EPGL 665
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 224/690 (32%), Positives = 364/690 (52%), Gaps = 54/690 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L+ C + R + GK +H R+I++ + D N+L+S+Y+ A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 61 FDEMAR---KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
F+ M R +++VSW+ M+ Y +N R AI+++ LE G V PN + Y+AV++ACS
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRACSN 178
Query: 118 SGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYSNWAASAYG 173
S + +GR+ + + E D + +L+DM+VK + K+FD+ S
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL------ 232
Query: 174 NVALWNSMLSGGKQ-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
NV W M++ Q + F V GFE + TL+S+ + C E++
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV---FSACAELE------ 283
Query: 225 NFMPERDVVSWT--GIIVGCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAAS 279
N + + SW +V ECS LVDMY+ C+ + + RK+FD+ +
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHS-- 335
Query: 280 AYGNVALWNSMISGYVLN-EQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNS 337
V W ++I+GY+ N EAI L S + + G + +TF+SA KAC NL +
Sbjct: 336 ----VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD--P 389
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R QV G G + V +++I ++ + ++ A F L +K++V+++ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ A+ L ++ V+ F +S+L + + S+R+G+Q+H+ VK G
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI MY KCG ID +F FM R+V+SWT +I G ++G A + F +MI+
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+T++ +LSAC H GLV E W F SM ++ ++P +EHY CMVDLL +AG D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A + I MPF+ D +W + L AC H+NT+L + A ++L P +P+ Y+ LSN+YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ +++R+ K+ K+ G SWIEV
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 224/690 (32%), Positives = 364/690 (52%), Gaps = 54/690 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L+ C + R + GK +H R+I++ + D N+L+S+Y+ A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 61 FDEMAR---KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
F+ M R +++VSW+ M+ Y +N R AI+++ LE G V PN + Y+AV++ACS
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRACSN 178
Query: 118 SGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYSNWAASAYG 173
S + +GR+ + + E D + +L+DM+VK + K+FD+ S
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL------ 232
Query: 174 NVALWNSMLSGGKQ-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
NV W M++ Q + F V GFE + TL+S+ + C E++
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV---FSACAELE------ 283
Query: 225 NFMPERDVVSWT--GIIVGCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAAS 279
N + + SW +V ECS LVDMY+ C+ + + RK+FD+ +
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHS-- 335
Query: 280 AYGNVALWNSMISGYVLN-EQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNS 337
V W ++I+GY+ N EAI L S + + G + +TF+SA KAC NL +
Sbjct: 336 ----VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD--P 389
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R QV G G + V +++I ++ + ++ A F L +K++V+++ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ A+ L ++ V+ F +S+L + + S+R+G+Q+H+ VK G
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI MY KCG ID +F FM R+V+SWT +I G ++G A + F +MI+
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+T++ +LSAC H GLV E W F SM ++ ++P +EHY CMVDLL +AG D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A + I MPF+ D +W + L AC H+NT+L + A ++L P +P+ Y+ LSN+YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ +++R+ K+ K+ G SWIEV
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 224/756 (29%), Positives = 353/756 (46%), Gaps = 113/756 (14%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA----------DFTSLND---- 56
R G++ S K+ H R++ GL+ D F N L+ +Y+ F +L
Sbjct: 18 RSGGRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVY 77
Query: 57 -----------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG 99
A L M +N VSW T++ A + P A+ +Y ML+ G
Sbjct: 78 SYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEG 137
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR- 158
+ P F ++VL AC LD GR H + L+ + N LL MY KCGS+
Sbjct: 138 -LAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADA 196
Query: 159 -KLFDQYSNWAASAYGNVALWNSMLSGG-------------------------------- 185
+LFD + ++ A+ + GG
Sbjct: 197 VRLFDGMPSPNEVSF--TAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACA 254
Query: 186 ----------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+ +HA V++GF + SL+D+Y K ++D+ + +F +
Sbjct: 255 QACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSS 314
Query: 230 RDVVSWTGII-----VGCFECSCFTLSALVD--------MYSNCNVLC-------EARKL 269
+VSW +I +GC+E + L + + YSN C AR +
Sbjct: 315 VSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAM 374
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ + V WN+++SGY E ++E I L + + D T L +C
Sbjct: 375 FDKIPKPS------VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSC 428
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L NF QVH V D V S LID+Y++ G V AL +F+ + ++DVV
Sbjct: 429 SRLGNF--ELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVC 486
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I G H L+ A+ + M + + +S++ +C+ L+S+ +G+Q+HA +
Sbjct: 487 WNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVL 546
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G+++ SLIDMY K G +DD F M +++V+W +I G QNG ++A+
Sbjct: 547 KDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVE 606
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ M+ ++ KP+ +TF+ VL+ C H+GLV+EA T F SM+ YG+ P +EHY C++D L
Sbjct: 607 LFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDAL 666
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+A F + E +I +MP+K D +W +L AC H+N +L A+ L P++PS YV
Sbjct: 667 ARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYV 726
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWI 664
+LSN+YATLG S VR G K G SW+
Sbjct: 727 LLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWV 762
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 216/503 (42%), Gaps = 91/503 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ G+ H +K GL F N LL MY S+ DA +LFD M
Sbjct: 145 LASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMP 204
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKAC--SLSGDLD 122
N VS+T M+ + A+RL+ M G V+P S+VL AC + +GD +
Sbjct: 205 SPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDP--VAVSSVLGACAQACAGDYN 262
Query: 123 LGRL------IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGN 174
+ R IH + R+ D + N+L+D+Y K + K+F+ S+ +
Sbjct: 263 VARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVS------ 316
Query: 175 VALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ WN +++G Q V F + GFE +VT ++++ +K ++ A+F+
Sbjct: 317 IVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFD 376
Query: 226 FMPERDVVSWTGIIVG-----------------------------------CFECSCFTL 250
+P+ V +W ++ G C F L
Sbjct: 377 KIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFEL 436
Query: 251 --------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
S L+D+YS C + A +F+ + +V WNSM
Sbjct: 437 GKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER------DVVCWNSM 490
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
ISG ++ +EEA L + +GM ++ S + C L + Q+H ++
Sbjct: 491 ISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQ--GRQMHAQVLKD 548
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GY+ + VG +LID+YA+ GN+ A F+ + K++VAW+ +I G ++G A LF
Sbjct: 549 GYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELF 608
Query: 411 RDMINSNQDVNQFIISSVLKVCS 433
M+ + Q + +VL CS
Sbjct: 609 EYMLTTKQKPDSVTFIAVLTGCS 631
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + + GK +H ++ L D+F + L+ +Y+ + A +F+ M +++
Sbjct: 425 LSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDV 484
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W +M++ + A M E G + P Y++++ C+ + GR +H
Sbjct: 485 VCWNSMISGLAIHSLSEEAFDFLKQMRENG-MFPTESSYASMINLCARLSSIPQGRQMHA 543
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL-TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ- 187
++ ++ + + + +L+DMY K G++ +LF + N+ WN M+ G Q
Sbjct: 544 QVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLF-----FNCMIVKNLVAWNEMIHGYAQN 598
Query: 188 --------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + + + VT +++ G +D+ + FN M
Sbjct: 599 GFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSM 646
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 347/657 (52%), Gaps = 39/657 (5%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS--NK 83
H +K G D++T NN+L+ Y L A LFDEM ++ VSW TM+ + + N
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+W + + E + + + ++LK + +G LG+ +H I + +
Sbjct: 81 EASWDVL---RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG 137
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
+ LLDMY KC KL D Y ++ + + N WN+M++G Q + T
Sbjct: 138 SALLDMYAKC----EKLEDAYLSFLSISKHNTVSWNAMINGYAQA----------GDRET 183
Query: 204 LTSLIDMYLKCGE-IDDGL--ALFNFMPERDVVSWTG-----IIVGCFECSCFTLSALVD 255
L+D + GE +DDG L + + D + T II E +AL+
Sbjct: 184 AFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALIT 243
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
YS C L +A+++FD +++ ++ WNS+++ Y+L Q + A LL + G
Sbjct: 244 SYSKCGSLDDAKRIFD-----SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGF 298
Query: 316 CIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR--LGNV 372
D Y++TS + AC N ++ N R +HGL++ G+E + + LI +Y + G++
Sbjct: 299 EPDLYSYTSIISACFNENISNNGR---SLHGLVIKRGFEQSVPISNALISMYLKSDYGSM 355
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
K AL +F L KD V+W+ ++ G ++ G + A F M ++ D++ + S+VL+ C
Sbjct: 356 KEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSC 415
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S LA+ + G+Q+H +K G E + +SLI MY KCG I+D F+ + ++W
Sbjct: 416 SDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWN 475
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ G Q+G+ A+ F M + ++K + ITF+ VL+AC H GLVE+ M+ +
Sbjct: 476 ALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESD 535
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
YG+ P +EHY C VDL G++G ++A+ LI EMPFKPD T+W + L AC + N +L
Sbjct: 536 YGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQ 595
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+A LL PE+ YV+LSN+Y L WD +KV++ K+ G KK G SWIEV++
Sbjct: 596 VAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNN 652
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 190/495 (38%), Gaps = 129/495 (26%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H IIK G +++++ G+ LL MYA L DA+ F +++ N VSW M+ Y
Sbjct: 118 GQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQ 177
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A L + M + G +G Y+ +L + +L +H +I + LE
Sbjct: 178 AGDRETAFWLLDCMEQEGEKVDDG-TYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N L+ Y KCGSL +++FD +++ ++ WNS+L+
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFD-----SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI 291
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC- 214
G+ +H +KRGFE+ +LI MYLK
Sbjct: 292 DMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSD 351
Query: 215 -GEIDDGLALFNFMPERDVVSWTGIIVG-------------------------------- 241
G + + L +F + +D VSW I+ G
Sbjct: 352 YGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAV 411
Query: 242 ---CFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAA 278
C + + F L S+L+ MYS C ++ +AR+ F++ S
Sbjct: 412 LRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASK--- 468
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+ WN+++ GY + Q A+ L + + +D TF + L AC S
Sbjct: 469 ---NSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTAC-------SH 518
Query: 339 FALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWS 391
L G E DY V + +DLY R G ++ A L +P K D W
Sbjct: 519 IGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWK 578
Query: 392 GLIMGCTKHGLNSLA 406
+ C G LA
Sbjct: 579 TFLGACRSCGNIELA 593
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY--ADFTSLNDAHK 59
DL + C G+SLH +IK G Q + N L+SMY +D+ S+ +A
Sbjct: 301 DLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALC 360
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F+ + K+ VSW +++T + A++ + HM +++ + + +SAVL++CS
Sbjct: 361 IFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLA 419
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAY 172
LG+ IH + LE + + ++L+ MY KCG + R+ F++ S W A +
Sbjct: 420 TFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMF 479
Query: 173 G-------NVALWNSMLSGGKQV---------------HAFCVKRGFE-----KEDVTLT 205
G NVAL L K+V H V++G + + D +
Sbjct: 480 GYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP 539
Query: 206 S-------LIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALV 254
+D+Y + G +++ AL MP + D W + C C L+ V
Sbjct: 540 PRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQV 596
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 354/659 (53%), Gaps = 39/659 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H +IK GL D+F GN L++MY F ++ A K+F M +N+VSW ++++ ++
Sbjct: 50 GEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSE 109
Query: 82 NKRPNWAIRLYNHMLEYGSVE----PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
N ++ ++ ++E + E P+ VL C+ D+ +G IH + L
Sbjct: 110 N---GFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLS 166
Query: 138 YDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
D + N+L+DMY KCG LT + LFD+ + N WN+M+ G G AF
Sbjct: 167 EDVRVNNSLVDMYSKCGYLTEAQMLFDKNNR------KNAVSWNTMIGGLCTKGYIFEAF 220
Query: 192 CVKRGFE-KEDVTL--TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ R + +ED+ + +++++ C EI +L +++ ++ I F+
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSL------KELHGYS--IRHGFQYDEL 272
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ V Y+ C +L A ++F YS + V WN++I G N +A+ L
Sbjct: 273 VANGFVAAYAKCGMLICAERVF--YSMETKT----VNSWNALIGGCAQNGDPRKALNLYI 326
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ SG+ D +T S L A +L + R+ +VHG ++ G E+D +G +L+ LY
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSL--RYGKEVHGFVLRHGLEIDSFIGISLLSLYIH 384
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G SA LF + +K V+W+ +I G +++GL A +LFR +++ + + SV
Sbjct: 385 CGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSV 444
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L CS ++LR GK+ H + +K ++ S IDMY K G I + ++F + +D+
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
SW II G +G +E+I F+ M + P+ TF+G+L+ C HAGLVEE F
Sbjct: 505 ASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNE 564
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M+ +G+EP LEHY C++D+LG+AG DDA +L+ EMP +PD +W+S+L C +
Sbjct: 565 MQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELE 624
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ I+AE+LL P++ YV LSN+YA G WD + +VR+ K +G +K AG SWIE+
Sbjct: 625 IGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIEL 683
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 192/498 (38%), Gaps = 107/498 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + ++ G +H +K GLS+D+ N+L+ MY+ L +A LF
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+ RKN VSW TM+ + A L+ M +E N +L AC L
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL 252
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL------------------------- 156
+ +H R +YD ++ N + Y KCG L
Sbjct: 253 RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGC 312
Query: 157 -----TRKLFDQYSNWAASAY-------GNVALWNSMLSG---GKQVHAFCVKRGFEKED 201
RK + Y S G++ L ++ L GK+VH F ++ G E +
Sbjct: 313 AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS 372
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------------- 241
SL+ +Y+ CGE LF+ M E+ VSW +I G
Sbjct: 373 FIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD 432
Query: 242 ---------------CF---------ECSCFTLSAL-----------VDMYSNCNVLCEA 266
C E C+ L AL +DMY+ + E+
Sbjct: 433 GFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKES 492
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R +FD + ++A WN++I+ Y ++ EE+I L + G D +TF L
Sbjct: 493 RSVFDGLKN------KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGIL 546
Query: 327 KAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
C L+ ++ ++ G E + ++D+ R G + AL L H +P+
Sbjct: 547 TVCSHAGLVEEGLKYFNEMQNF---HGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPE 603
Query: 385 K-DVVAWSGLIMGCTKHG 401
+ D WS L+ C G
Sbjct: 604 QPDSRVWSSLLSFCRNFG 621
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 399 KHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRG--KQVHAFCVKRGFEK 455
++ L S A +F +I + + + F V+K C+ SL RG + +H +K G
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLL 64
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ +LI MY K G +D + +F +MP R++VSW II G +NG +K+ EM+
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 516 --QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
+ L P+ T + VL C V+ I + + GL + +VD+ + G
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIH-GLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 574 CFDDAEQLIAEMPFKPDKTIWASML 598
+A Q++ + + + W +M+
Sbjct: 184 YLTEA-QMLFDKNNRKNAVSWNTMI 207
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 216/694 (31%), Positives = 350/694 (50%), Gaps = 78/694 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHK 59
+DL + L C SI +G+ LH +K G+ + + GN LL MY+ S+ +A +
Sbjct: 4 LDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LF+EM ++N SW TM+ Y + ++ L++ M + F ++ V+ + G
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM-----PHKDAFSWNVVISGFAKEG 118
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK---LFDQYS-NWAASAYGNV 175
+L++ R R+ E + + N+++ Y C ++ LF S N G+
Sbjct: 119 NLEVAR----RLFNEMPWKNGIAWNSMIHGYA-CNGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 176 ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
+ +++ GKQ+HA V E + V +SL+++Y KCG+ID + N
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M E D F+LSAL+ Y++C + +AR++F S+ V L
Sbjct: 234 MKEPD---------------AFSLSALISGYASCGRMNDARRIFCLKSNXC------VVL 272
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WNSMISGYV N + EA+ L +++ G+ D TF S L AC L + +QVH
Sbjct: 273 WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQ--GIQVHAH 330
Query: 347 IVTSGYELDYIVGSNLIDLYARL-------------------------------GNVKSA 375
+ G+ D I+ S L+D+Y++ G + A
Sbjct: 331 VYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDA 390
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F +P K +++W+ +I+G +++ A LF +M +++F ++ V+ C+ +
Sbjct: 391 RQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASI 450
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+SL G+Q+ A G E + I TSL+D Y KCG ++ G LF M + D V W ++
Sbjct: 451 SSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSML 510
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
+G NG EA+ F +M ++P +ITF+GVLSAC H GLVEE F +MK +Y +
Sbjct: 511 MGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHI 570
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P +EHY CMVDL +AG +DA LI +MP K D ++W+S+L+ C H N L +A+
Sbjct: 571 NPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAK 630
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
+++ PE+ YV LS +YAT W ++VRK
Sbjct: 631 RIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRK 664
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/683 (27%), Positives = 311/683 (45%), Gaps = 116/683 (16%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCR--------IIKYGLSQDIFTGNNLLSMYADFTSL 54
LR + E R C +R K + R +IK G + F GN L +Y+ +
Sbjct: 706 LRLVAEKKRECDERDQ----KFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTG 761
Query: 55 NDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
ND+ ++F+++ KN++SW + A+ +R
Sbjct: 762 NDSLRVFEDIIDKNLISWNIFLKAF---------VRF----------------------- 789
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA--- 171
G+L+ R + + + + D V NT++ YV G L F +S +
Sbjct: 790 ----GELERARDVFDEMPKR----DVVSWNTMISGYVSFG-LFDDAFRFFSEMQKAGIRP 840
Query: 172 ----YGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNF 226
Y + + S GKQ+HA ++ G + +V + SLI MY K G +D +F
Sbjct: 841 SGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFIT 900
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M E D++SW +I C S Y N+AL
Sbjct: 901 MEELDIISWNSLIWSC----------------------------------GKSGYQNLAL 926
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
+VL + S G D +T ++ + C NL + Q+ L
Sbjct: 927 -----RQFVL-------------MRSVGYSPDQFTVSTVITVCSNLQDLEK--GEQIFAL 966
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G+ + IV S IDL+++ ++ ++ +F + + D V + +I HG A
Sbjct: 967 CIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENA 1026
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF + N +F +S VL S L + +G Q+H+ VK G E + I +SL++M
Sbjct: 1027 LQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEM 1086
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G ID + F + RD++SW +I+G NGR +A+ F+E++ P+EIT
Sbjct: 1087 YAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITL 1146
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
GVL AC GLV+E +IF+SM+ EYG+ P +EHY C+VD++ + G +A ++ MP
Sbjct: 1147 AGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMP 1206
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+P IW S+L ACE + + + +AE+++ P+ Y++L+ Y G W+SL +
Sbjct: 1207 HEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVR 1266
Query: 647 VRKAGKKLGEKKA-GMSWIEVSS 668
V +A K+ G +K G SWI + +
Sbjct: 1267 VXRAMKEKGVRKVIGCSWIGIKN 1289
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 216/660 (32%), Positives = 348/660 (52%), Gaps = 42/660 (6%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H +K GL +++ G++L+SMYA + A K+FD + +N+V W M+ Y
Sbjct: 346 GLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N N + L+ +M G P+ F YS++L AC+ LDLG +H I + K +
Sbjct: 406 NGYANEVMELFFNMKSCG-FYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKR 195
+ N L+DMY K G+L R+ F+ N NV+ WN ++ G Q V AF + R
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRN-----RDNVS-WNVIIVGYVQEEDEVEAFHLFR 518
Query: 196 -----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
G ++V+L S++ ++ G V + G E ++
Sbjct: 519 RMNLLGILPDEVSLASILSACASVRGLEQG----------KQVHCLSVKTGQ-ETKLYSG 567
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S+L+DMY+ C + A K+ A +V N++I+GY E+A+ L +
Sbjct: 568 SSLIDMYAKCGAIDSAHKIL------ACMPERSVVSMNALIAGYA-QINLEQAVNLFRDM 620
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD-YIVGSNLIDLYARL 369
G+ TF S L AC N Q+H LI+ G +LD +G +L+ +Y
Sbjct: 621 LVEGINSTEITFASLLDACHEQQKLN--LGRQIHSLILKMGLQLDDEFLGVSLLGMYMNS 678
Query: 370 GNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
A LF K V W+ +I G +++ + +A L+++M + N +Q S
Sbjct: 679 LRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSA 738
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERD 487
L+ C+ ++S++ G + H+ GF+ +++T ++L+DMY KCG++ + +FK M ++D
Sbjct: 739 LRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKD 798
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+SW +IVG +NG A++A+ F EM QS + P+++TFLGVL+AC H+G V E IF
Sbjct: 799 VISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFD 858
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
M YG++P +H CMVDLLG+ G +AE+ I ++ F+PD +WA+ML AC H +
Sbjct: 859 MMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDD 918
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
AE+L+ P++ S YV+LSN+YA G WD ++ +R+ ++ G KK G SWI V
Sbjct: 919 IRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVV 978
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 176/656 (26%), Positives = 286/656 (43%), Gaps = 83/656 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +K G+ +HC ++K G + L+ MYA L DA +FD +
Sbjct: 167 LSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDK 226
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+M+ Y P A++++ M + G EP+ + V+ A +DLGRL +
Sbjct: 227 VSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ-EPDQVAFVTVINAY-----VDLGRLDNA 280
Query: 130 RITREKLEYDTVLM-NTLLDMYVKCGSLTRKL-FDQYSNWAA-----SAYGNVALWNSML 182
++ V+ N ++ + K G + F Q A S G+V + L
Sbjct: 281 SDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASL 340
Query: 183 SG---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ G VHA +K+G +SL+ MY KCG+++ +F+ + E++VV W ++
Sbjct: 341 AALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAML 400
Query: 240 VGCFE--------------------------------CSC-------------------- 247
G + C+C
Sbjct: 401 GGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFA 460
Query: 248 ---FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
F +ALVDMY+ L +AR+ F+ + NV+ WN +I GYV E EA
Sbjct: 461 SNLFVGNALVDMYAKSGALEDARQQFELIRN-----RDNVS-WNVIIVGYVQEEDEVEAF 514
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L ++ G+ D + S L AC ++ QVH L V +G E GS+LID
Sbjct: 515 HLFRRMNLLGILPDEVSLASILSACASVRGLEQ--GKQVHCLSVKTGQETKLYSGSSLID 572
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ G + SA ++ +P++ VV+ + LI G + L A LFRDM+ + +
Sbjct: 573 MYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLEQ-AVNLFRDMLVEGINSTEIT 631
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALF-KF 482
+S+L C L G+Q+H+ +K G + +D L SL+ MY+ D LF +F
Sbjct: 632 FASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEF 691
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ V WT +I G QN + A+ ++EM + P++ TF+ L AC +++
Sbjct: 692 SNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDG 751
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
T S+ G + +VD+ + G + Q+ EM K D W SM+
Sbjct: 752 -TETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 173/660 (26%), Positives = 301/660 (45%), Gaps = 84/660 (12%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K +H + +K G GN ++ +YA ++ A + F ++ K+I++W ++++ ++
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
P+ ++ + + G V PN F ++ VL +C+ + GR +H + + E +
Sbjct: 139 GFPHLVVKYFGLLWNSG-VWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYC 197
Query: 143 MNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAF 191
L+ MY KC LT R +FD A V+ W SM+ G +V
Sbjct: 198 EGALIGMYAKCNFLTDARSIFD-----GAVELDKVS-WTSMIGGYIKVGLPEEAVKVFQE 251
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
K G E + V ++I+ Y+ G +D+ LF+ MP R+VV+W +I G + + +
Sbjct: 252 MEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAK-GGYGVE 310
Query: 252 ALVDMYSNC------NVLCEARKLFDQYSSWAASAYG--------------NVALWNSMI 291
A ++ + N + + +S AA +G NV + +S++
Sbjct: 311 A-IEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLV 369
Query: 292 SGY--------------VLNEQN-----------------EEAITLLSHIHSSGMCIDSY 320
S Y LNEQN E + L ++ S G D +
Sbjct: 370 SMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDF 429
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T++S L AC L + Q+H +I+ + + + VG+ L+D+YA+ G ++ A + F
Sbjct: 430 TYSSILSACACLKYLD--LGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFE 487
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ +D V+W+ +I+G + A+ LFR M ++ ++S+L C+ + L +
Sbjct: 488 LIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQ 547
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GKQVH VK G E + + +SLIDMY KCG ID + MPER VVS +I G Q
Sbjct: 548 GKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ 607
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
++A+ F++M+ + EITF +L AC + I S+ + GL+ L+
Sbjct: 608 I-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIH-SLILKMGLQ--LD 663
Query: 561 HYYCMVDLLG---QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+ V LLG + DA L +E +W +M+ ++ S++A QL
Sbjct: 664 DEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQND----CSVVALQL 719
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 241/565 (42%), Gaps = 83/565 (14%)
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD--------LGRLIHERITREKLEYDTV 141
R+Y H+L+ N S +K SL ++ ++IH + + V
Sbjct: 42 RIYTHILQ------NCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKGV 95
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA------------------LWNS- 180
L N ++D+Y KC + + F Q + A+ ++ LWNS
Sbjct: 96 LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSG 155
Query: 181 -------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
M+ G+QVH VK GFE +LI MY KC + D
Sbjct: 156 VWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDAR 215
Query: 222 ALFNFMPERDVVSWTGIIVGCF--------------------ECSCFTLSALVDMYSNCN 261
++F+ E D VSWT +I G E +++ Y +
Sbjct: 216 SIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLG 275
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
L A LF + + NV WN MISG+ EAI ++ +G+ T
Sbjct: 276 RLDNASDLFSRMPN------RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRST 329
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L A +L + F L VH + G + VGS+L+ +YA+ G +++A ++F
Sbjct: 330 LGSVLSAIASLAALD--FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDT 387
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
L +++VV W+ ++ G ++G + LF +M + + F SS+L C+CL L G
Sbjct: 388 LNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLG 447
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
Q+H+ +K F +L+DMY K G ++D F+ + RD VSW IIVG Q
Sbjct: 448 HQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQE 507
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
EA F+ M + P+E++ +LSAC +E+ + + + G E L
Sbjct: 508 EDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHC-LSVKTGQETKLYS 566
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMP 586
++D+ + G D A +++A MP
Sbjct: 567 GSSLIDMYAKCGAIDSAHKILACMP 591
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 238/526 (45%), Gaps = 36/526 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G LH IIK + ++F GN L+ MYA +L DA + F+ + ++
Sbjct: 435 LSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDN 494
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ Y + A L+ M G + P+ +++L AC+ L+ G+ +H
Sbjct: 495 VSWNVIIVGYVQEEDEVEAFHLFRRMNLLG-ILPDEVSLASILSACASVRGLEQGKQVHC 553
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
+ E ++L+DMY KCG++ + A +V N++++G Q+
Sbjct: 554 LSVKTGQETKLYSGSSLIDMYAKCGAIDSA----HKILACMPERSVVSMNALIAGYAQIN 609
Query: 189 --HAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
A + R G ++T SL+D + +++ G + + + + +G
Sbjct: 610 LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLI----------LKMG 659
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
F +L+ MY N +A LF ++S+ ++ +W +MISG N+ +
Sbjct: 660 LQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSA-----VVWTAMISGLSQNDCSV 714
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
A+ L + S + D TF SAL+AC + + + H LI +G++ D + S
Sbjct: 715 VALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKD--GTETHSLIFHTGFDSDELTSSA 772
Query: 362 LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+YA+ G+VKS++++F + KKDV++W+ +I+G K+G A +F +M S+
Sbjct: 773 LVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTP 832
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ VL CS + G+ + V G + ++D+ + G + +
Sbjct: 833 DDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEF 892
Query: 480 F-KFMPERDVVSWTGIIVGC---GQNGRAKEAIAYFQEMIQSRLKP 521
K E D W ++ C G + R ++A E+ P
Sbjct: 893 INKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSP 938
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V ALR C SIK G H I G D T + L+ MYA + + ++F
Sbjct: 731 DQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVF 790
Query: 62 DEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
EM+R K+++SW +M+ + N A+R+++ M + V P+ + VL ACS SG
Sbjct: 791 KEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEM-KQSHVTPDDVTFLGVLTACSHSGR 849
Query: 121 LDLGRLIHE 129
+ GRLI +
Sbjct: 850 VSEGRLIFD 858
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 335/659 (50%), Gaps = 58/659 (8%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + R+ Q K LHC IIK + + F NNL++ Y+ ++ A +FD+M + N SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN--GFMYSAVLKACSLSGDLDLGRLIHER 130
TM++AY+ + + M E S+ PN G +++++ SG + G ++
Sbjct: 75 NTMLSAYSKSGD-------LSTMQEIFSIMPNRDGVSWNSLI-----SGYVCYGSVVEAV 122
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
T + D VL +L R F S+ G V L G+Q+H
Sbjct: 123 KTYNSMMKDGVL------------NLNRITFSTML-LLVSSQGCVDL-------GRQIHG 162
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
VK GF +SL+DMY K G + +F+ + ER+VV + +I G
Sbjct: 163 QIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSG---- 218
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
M + L K D S W +MI+G + N EA+ L +
Sbjct: 219 -----MVKDSKRLFHGMKERDSIS------------WTTMITGLIQNGLEAEAMDLFRDM 261
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
GM +D YTF S L AC L ++H LI+ SGY + VGS L+D+Y +
Sbjct: 262 RQEGMAMDQYTFGSVLTACGGLRALKE--GKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+V+ A +F R+ K+VV+W+ +++G ++G + A +F DM + + + F + SV+
Sbjct: 320 SVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVIS 379
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ LASL G Q H + G +LI +Y KCG I+D LF M RD VS
Sbjct: 380 SCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVS 439
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
WT ++ G Q G+A E I F+ M+ LKP+ +TF+ VLSAC AGLVE F SM
Sbjct: 440 WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESML 499
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++G+ P +HY CM+DL G+AG ++A+ I +MPF PD WA++L +C + N ++
Sbjct: 500 KDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIG 559
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
AE LL P++P+ Y++LS++YA G W +++++R+ ++ G +K G SWI+ S
Sbjct: 560 KWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKS 618
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 42/337 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG R++K+GK +H II+ G + ++F G+ L+ MY S+ A +
Sbjct: 268 MDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F MA KN+VSWT M+ Y N A+R++ M G +EP+ F +V+ +C+
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG-IEPDDFTLGSVISSCANLAS 386
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L+ G H + L + N L+ +Y KCGS+ + +LFD+ S + + W
Sbjct: 387 LEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS------FRDEVSW 440
Query: 179 NSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+++SG Q + + +G + + VT +++ + G ++ G F M +
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS------SWAA----- 278
GII +C ++D++ L EA+ ++ WA
Sbjct: 501 DH-----GIIPFSDHYTC-----MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550
Query: 279 SAYGN--VALWNSMISGYVLNEQNEEAITLLSHIHSS 313
YGN + W + S L+ QN LLS I+++
Sbjct: 551 RLYGNEEIGKWAAE-SLLELDPQNPAGYILLSSIYAA 586
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 232/754 (30%), Positives = 357/754 (47%), Gaps = 123/754 (16%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+S+ G +H ++K GL N+LLS Y+ A ++FDE VSW+++V
Sbjct: 18 QSLFLGAHIHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLV 75
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
TAY++N P A+ + M G V N F VLK +G LG +H L
Sbjct: 76 TAYSNNALPREALAAFRAMRARG-VRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGL 131
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
D + N L+ MY G + R++FD+ A+ N WN M+S
Sbjct: 132 SGDIFVANALVAMYGGFGFVDEARRVFDE-----AARDRNAVSWNGMMSAFVKNDRCSDA 186
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
G++VHA V+ G++K+ T +L+DM
Sbjct: 187 VELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDM 246
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSCFTL 250
Y K G+I +F +P+ DVVSW I GC + FTL
Sbjct: 247 YSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 251 S-------------------------------------ALVDMYSNCNVLCEARKLFDQY 273
S ALVDMY+ +L +ARK+F+
Sbjct: 307 SSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFE-- 364
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
W ++ LWN++ISG + E+++L + G I+ T + LK+ +L
Sbjct: 365 --WIPRK--DLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ QVH L G+ D V + LID Y + ++ A ++F +++A++ +
Sbjct: 421 AISD--TTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSM 478
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I ++ A LF +M+ + + F++SS+L C+ L++ +GKQVHA +KR F
Sbjct: 479 ITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKF 538
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +L+ Y KCG I+D F +P++ VVSW+ +I G Q+G K A+ F+
Sbjct: 539 MTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRR 598
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M+ R+ PN IT VL AC HAGLV+EA F+SMK +G++ EHY CM+DLLG+AG
Sbjct: 599 MVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAG 658
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
DDA +L+ MPF+ + +W ++L A H + +L + AE+L PE +V+L+N
Sbjct: 659 KLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLAN 718
Query: 634 VYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
YA+ GMWD ++KVRK K KK MSW+E+
Sbjct: 719 TYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVEL 752
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 233/500 (46%), Gaps = 41/500 (8%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R ++ G+ +H +++ G +D+FT N L+ MY+ ++ A +F ++ + ++VSW
Sbjct: 212 CTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSW 271
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK--ACSLSGDLDLGRLIHER 130
++ + A+ L M G V PN F S++LK A + +G LGR IH
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLV-PNVFTLSSILKACAGAGAGAFALGRQIHGF 330
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + + D + L+DMY K G L RK+F+ W ++ LWN+++SG
Sbjct: 331 MIKACADSDDYIGVALVDMYAKYGLLDDARKVFE----WIPRK--DLLLWNALISGCSHG 384
Query: 185 ---GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
G+ + FC K G + TL +++ I D + + +S + ++
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVV 444
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
G L+D Y CN L A K+F+++SS N+ + SMI+ +
Sbjct: 445 NG-----------LIDSYWKCNCLRYANKVFEEHSS------DNIIAFTSMITALSQCDH 487
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
E+AI L + G+ D + +S L AC +L + QVH ++ + D G
Sbjct: 488 GEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ--GKQVHAHLIKRKFMTDVFAG 545
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+ YA+ G+++ A F LP K VV+WS +I G +HG A +FR M++
Sbjct: 546 NALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIA 605
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLA 478
N ++SVL C+ + K + + G ++ + + +ID+ + G++DD +
Sbjct: 606 PNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 665
Query: 479 LFKFMP-ERDVVSWTGIIVG 497
L MP E + W ++
Sbjct: 666 LVNSMPFEANAAVWGALLAA 685
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 31/311 (9%)
Query: 2 DLRR--IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
D+ R + L+ +I +H K G D N L+ Y L A+K
Sbjct: 403 DINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANK 462
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F+E + NI+++T+M+TA + AI+L+ ML G +EP+ F+ S++L AC+
Sbjct: 463 VFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-LEPDPFVLSSLLNACASLS 521
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+ G+ +H + + K D N L+ Y KCGS+ D ++ V W+
Sbjct: 522 AYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIE----DADLAFSGLPDKGVVSWS 577
Query: 180 SMLSG----GKQVHAFCVKRGFEKE-----DVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ G G A V R E +TLTS++ G +D+ F+ M E
Sbjct: 578 AMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEM 637
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ T C ++D+ L +A +L + A N A+W ++
Sbjct: 638 FGIDRTEEHYSC----------MIDLLGRAGKLDDAMELVNSMPFEA-----NAAVWGAL 682
Query: 291 ISGYVLNEQNE 301
++ ++ E
Sbjct: 683 LAASRVHRDPE 693
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 6/176 (3%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
IS +L + SL G +HA +K G L+ Y KC +F P
Sbjct: 7 ISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDETP 64
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+ VSW+ ++ N +EA+A F+ M ++ NE VL AGL +
Sbjct: 65 DPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHA 124
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ S GL + +V + G G D+A ++ E + W M+ A
Sbjct: 125 VAVST----GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 346/657 (52%), Gaps = 39/657 (5%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS--NK 83
H +K G D++T NN+L+ Y L A LFDEM ++ VSW TM+ + + N
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+W + + E + + + ++LK + +G LG+ +H I + +
Sbjct: 81 EASWDVL---RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG 137
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
+ LLDMY KC KL D Y ++ + + N WN+M++G Q + T
Sbjct: 138 SALLDMYAKC----EKLEDAYLSFLSISKHNTVSWNAMINGYAQA----------GDRET 183
Query: 204 LTSLIDMYLKCGE-IDDGL--ALFNFMPERDVVSWTG-----IIVGCFECSCFTLSALVD 255
L+D + GE +DDG L + + D + T II E +AL+
Sbjct: 184 AFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALIT 243
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
YS C L +A+++FD +++ ++ WNS+++ Y+L Q + A LL + G
Sbjct: 244 SYSKCGSLDDAKRIFD-----SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGF 298
Query: 316 CIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR--LGNV 372
D Y++TS + AC N ++ N R +HGL++ G+E + + LI +Y + G++
Sbjct: 299 EPDLYSYTSIISACFNENISNNGR---SLHGLVIKRGFEQSVPISNALISMYLKSDYGSM 355
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
K AL +F L KD V+W+ ++ G ++ G + A F M ++ D++ + S+VL+ C
Sbjct: 356 KEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSC 415
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S LA+ + G+Q+H +K G E + +SLI MY KCG I+D F+ + ++W
Sbjct: 416 SDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWN 475
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ G Q+G+ A+ F M ++K + ITF+ VL+AC H GLVE+ M+ +
Sbjct: 476 ALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESD 535
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
YG+ P +EHY C VDL G++G ++A+ LI EMPFKPD T+W + L AC + N +L
Sbjct: 536 YGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQ 595
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+A LL PE+ YV+LSN+Y L WD +KV++ K+ G KK G SWIEV++
Sbjct: 596 VAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNN 652
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 190/495 (38%), Gaps = 129/495 (26%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H IIK G +++++ G+ LL MYA L DA+ F +++ N VSW M+ Y
Sbjct: 118 GQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQ 177
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A L + M + G +G Y+ +L + +L +H +I + LE
Sbjct: 178 AGDRETAFWLLDCMEQEGEKVDDG-TYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N L+ Y KCGSL +++FD +++ ++ WNS+L+
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFD-----SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI 291
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC- 214
G+ +H +KRGFE+ +LI MYLK
Sbjct: 292 DMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSD 351
Query: 215 -GEIDDGLALFNFMPERDVVSWTGIIVG-------------------------------- 241
G + + L +F + +D VSW I+ G
Sbjct: 352 YGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAV 411
Query: 242 ---CFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAA 278
C + + F L S+L+ MYS C ++ +AR+ F++ S
Sbjct: 412 LRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASK--- 468
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+ WN+++ GY + Q A+ L + + +D TF + L AC S
Sbjct: 469 ---NSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTAC-------SH 518
Query: 339 FALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWS 391
L G E DY V + +DLY R G ++ A L +P K D W
Sbjct: 519 IGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWK 578
Query: 392 GLIMGCTKHGLNSLA 406
+ C G LA
Sbjct: 579 TFLGACRSCGNIELA 593
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY--ADFTSLNDAHK 59
DL + C G+SLH +IK G Q + N L+SMY +D+ S+ +A
Sbjct: 301 DLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALC 360
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F+ + K+ VSW +++T + A++ + HM +++ + + +SAVL++CS
Sbjct: 361 IFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLA 419
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAY 172
LG+ IH + LE + + ++L+ MY KCG + R+ F++ S W A +
Sbjct: 420 TFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMF 479
Query: 173 G-------NVALWNSMLSGGKQV---------------HAFCVKRGFE-----KEDVTLT 205
G NVAL L K+V H V++G + + D +
Sbjct: 480 GYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP 539
Query: 206 S-------LIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALV 254
+D+Y + G +++ AL MP + D W + C C L+ V
Sbjct: 540 PRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQV 596
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 212/678 (31%), Positives = 349/678 (51%), Gaps = 39/678 (5%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L L+ C +++S++ GK +H II G+S D G L+ MY + L K+
Sbjct: 367 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKI 426
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD++ + W +++ Y ++ L+ M + G V N + ++ VLK + G
Sbjct: 427 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCVLKCFAALGK 485
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
+ + +H + + +T ++N+L+ Y K G + LFD+ S +V W
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE------PDVVSW 539
Query: 179 NSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
NSM++G G ++ + G E + TL S++ + G + G AL F
Sbjct: 540 NSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFG-- 597
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ CF + L+DMYS C L A ++F + + W S
Sbjct: 598 ---------VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTT------IVSWTS 642
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
I+ YV +AI L + S G+ D YT TS + AC + + VH ++
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK--GRDVHSYVIK 700
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
+G + V + LI++YA+ G+V+ A +F ++P KD+V+W+ +I G +++ L + A L
Sbjct: 701 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALEL 760
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F DM + + ++ VL C+ LA+L +G+++H ++RG+ + +L+DMY K
Sbjct: 761 FLDMQKQFKP-DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAK 819
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + LF +P++D++SWT +I G G +G EAI+ F EM + ++P+E +F +
Sbjct: 820 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVI 879
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L+AC H+GL+ E W F SM+ E G+EP LEHY C+VDLL + G A + I MP KP
Sbjct: 880 LNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKP 939
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D TIW +L C H++ KL +AE + P++ YV+L+NVYA W+ + K+RK
Sbjct: 940 DTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 999
Query: 650 AGKKLGEKK-AGMSWIEV 666
+K G K+ G SWIEV
Sbjct: 1000 RMQKRGFKQNPGCSWIEV 1017
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/703 (30%), Positives = 338/703 (48%), Gaps = 90/703 (12%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
++++ N +S L A L M +N VSW T++ A + P A+ +Y ML
Sbjct: 75 NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGML 134
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ G + P F ++VL AC LD GR H + L+ + + N LL MY KCGS+
Sbjct: 135 QEG-LAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSV 193
Query: 157 TR--KLFDQYSNWAASAYGNVALWNSMLSG------------------------------ 184
+LFD W +S N + +M+ G
Sbjct: 194 ADAVRLFD----WMSSP--NEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVS 247
Query: 185 ----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+ +HA V++GF+ + SLIDMY K ++D+ +
Sbjct: 248 SVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMK 307
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLS-ALVDM------------YSNCNVLC----- 264
+F M +VSW ++ G + C+ + ++D+ YSN C
Sbjct: 308 VFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARD 367
Query: 265 --EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
AR +FD+ S +V WN+++SGY E +++ I L + + D T
Sbjct: 368 VPSARAMFDKISK------PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTL 421
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L C L QVH V D V S LID+Y++ G V A +F+ +
Sbjct: 422 AVILSTCSRLGIL--ELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMM 479
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++DVV W+ +I G H LN A+ F+ M + + +S++ C+ L+S+ +G+
Sbjct: 480 TERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGR 539
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
Q+HA +K G+++ +SLIDMY KCG +DD F M +++V+W +I G QNG
Sbjct: 540 QIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNG 599
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
++A+ F+ M+ ++ KP+ +TF+ VL+ C H+GLV+EA F SM+ YG+ P +EHY
Sbjct: 600 FGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHY 659
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C++D LG+AG F + +I +MP+K D +W +L AC H+N +L A+ L P
Sbjct: 660 TCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDP 719
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWI 664
++PS YV+LSN+YATLG S VR G K G SW+
Sbjct: 720 KNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWV 762
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 137/565 (24%), Positives = 241/565 (42%), Gaps = 83/565 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ G+ H +K GL + F N LL MY S+ DA +LFD M+
Sbjct: 145 LASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMS 204
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLDL 123
N VS+T M+ + + A+RL+ M ++ + S+VL AC + +GD ++
Sbjct: 205 SPNEVSFTAMMGGLAQSGAVDDALRLFARM-SRSAIRVDPVAVSSVLGACAQACAGDYNV 263
Query: 124 GRL------IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNV 175
R IH + R+ + D + N+L+DMY K + K+F+ S+ + +
Sbjct: 264 ARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVS------I 317
Query: 176 ALWNSMLSGGKQVHAFCVKR-----------GFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
WN +++G Q+ C +R GFE +VT ++++ +K ++ A+F
Sbjct: 318 VSWNILVTGYGQLG--CYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMF 375
Query: 225 NFMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLC 264
+ + + V +W ++ G + TL+ ++ S +L
Sbjct: 376 DKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILE 435
Query: 265 EARK-------------------LFDQYSSWAASAYG----------NVALWNSMISGYV 295
++ L D YS +V WNSMISG
Sbjct: 436 LGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLA 495
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
++ NEEA + +GM ++ S + +C L + Q+H ++ GY+ +
Sbjct: 496 IHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQ--GRQIHAQVLKDGYDQN 553
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VGS+LID+YA+ GN+ A F+ + K++VAW+ +I G ++G A LF M+
Sbjct: 554 VYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLT 613
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ Q + +VL CS + ++ G T LID + G
Sbjct: 614 TKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFA 673
Query: 475 DGLALFKFMPER-DVVSWTGIIVGC 498
+ +A+ MP + D + W ++ C
Sbjct: 674 EVVAVIDKMPYKDDAILWEVLLAAC 698
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 240/542 (44%), Gaps = 55/542 (10%)
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT-R 133
+V Y+ + P A+R + + PN + Y+A + A +GDL R + R+ R
Sbjct: 51 LVELYSLSGLPCHALRAFRAL-----PRPNVYSYNAAISAACRAGDLAAARDLLGRMPDR 105
Query: 134 EKLEYDTVLM--------NTLLDMYVKCGSLTRKLFDQYSNWAA--SAYGNVALWNSMLS 183
+ ++TV+ L+MY G L L A+ SA G VA L
Sbjct: 106 NAVSWNTVIAAVARSDSPGEALEMYR--GMLQEGLAPTNFTLASVLSACGAVA----ALD 159
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
G++ H VK G + L+ MY KCG + D + LF++M + VS+T ++ G
Sbjct: 160 DGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLA 219
Query: 244 ECSC----------FTLSAL-VDMYSNCNVL------CEARKLFDQYSSWAASAYGNVA- 285
+ + SA+ VD + +VL C + A S + V
Sbjct: 220 QSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVR 279
Query: 286 --------LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ NS+I Y + +EA+ + + S + I S+ L L
Sbjct: 280 KGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM--SSVSIVSWNI---LVTGYGQLGCYE 334
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R AL+V L+ SG+E + + SN++ + +V SA +F ++ K V W+ L+ G
Sbjct: 335 R-ALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGY 393
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ L+ LFR M + N ++ ++ +L CS L L GKQVH+ VK +
Sbjct: 394 GQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDM 453
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+ LIDMY KCG++ +F M ERDVV W +I G + +EA +F++M ++
Sbjct: 454 FVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMREN 513
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ P E ++ ++++C + + I + + G + ++ ++D+ + G DD
Sbjct: 514 GMFPTESSYASMINSCARLSSIPQGRQIHAQVLKD-GYDQNVYVGSSLIDMYAKCGNMDD 572
Query: 578 AE 579
A
Sbjct: 573 AR 574
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 207/467 (44%), Gaps = 47/467 (10%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + L L+++Y G L F +P +V S+ I C L+A D
Sbjct: 40 GLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAA--CRAGDLAAARD 97
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+ ++ D+ N WN++I+ ++ EA+ + + G+
Sbjct: 98 LLG---------RMPDR----------NAVSWNTVIAAVARSDSPGEALEMYRGMLQEGL 138
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
++T S L AC + + + HGL V G + + V + L+ +Y + G+V A
Sbjct: 139 APTNFTLASVLSACGAVAALDD--GRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADA 196
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--S 433
+ LF + + V+++ ++ G + G A LF M S V+ +SSVL C +
Sbjct: 197 VRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQA 256
Query: 434 CLA------SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
C ++R + +HA V++GF+ + SLIDMY K ++D+ + +F+ M
Sbjct: 257 CAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVS 316
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
+VSW ++ G GQ G + A+ M +S +PNE+T+ +L++C A V A +F
Sbjct: 317 IVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFD 376
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKACETH 604
+ +P + + ++ GQ D +L M +PD+T A +L C
Sbjct: 377 KIS-----KPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRL 431
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+L +Q+ + S K ++ ++++ G+ D SK + G
Sbjct: 432 GILEL----GKQVHSAS----VKLLLHNDMFVASGLIDMYSKCGQVG 470
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 208/515 (40%), Gaps = 102/515 (19%)
Query: 136 LEYDTVLMNTLLDMYVKCG----------SLTRKLFDQYSNWAASAY------------- 172
L DT L+N L+++Y G +L R Y N A SA
Sbjct: 41 LAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSY-NAAISAACRAGDLAAARDLL 99
Query: 173 -----GNVALWNSML-------SGGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEID 218
N WN+++ S G+ + + ++ G + TL S++ +D
Sbjct: 100 GRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALD 159
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
DG + VG + + F + L+ MY+ C + +A +LFD W +
Sbjct: 160 DGRRCHGL----------AVKVG-LDGNQFVENGLLGMYTKCGSVADAVRLFD----WMS 204
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL--NFN 336
S N + +M+ G + ++A+ L + + S + +D +S L AC ++N
Sbjct: 205 SP--NEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYN 262
Query: 337 S----RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
R A +H L+V G++ D VG++LID+YA+ + A+++F + +V+W+
Sbjct: 263 VARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNI 322
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
L+ G + L R +V + G
Sbjct: 323 LVTGYGQ-----------------------------------LGCYERALEVLDLMQESG 347
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
FE ++T ++++ +K ++ A+F + + V +W ++ G GQ ++ I F+
Sbjct: 348 FEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFR 407
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC--MVDLLG 570
M ++P+ T +LS C G++E + ++ L H + + ++D+
Sbjct: 408 RMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSA---SVKLLLHNDMFVASGLIDMYS 464
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ G A Q+I M + D W SM+ H+
Sbjct: 465 KCGQVGIA-QIIFNMMTERDVVCWNSMISGLAIHS 498
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 82/332 (24%)
Query: 347 IVTSGYELDYIVGSNLIDLYA-------------------------------RLGNVKSA 375
++ +G D + + L++LY+ R G++ +A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+L R+P ++ V+W+ +I + A ++R M+ F ++SVL C +
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
A+L G++ H VK G + L+ MY KCG + D + LF +M + VS+T ++
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC---------------------- 533
G Q+G +A+ F M +S ++ + + VL AC
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHA 275
Query: 534 ----------RHAG-----------LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+H G ++EA +F SM + + +V GQ
Sbjct: 276 LVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-----SVSIVSWNILVTGYGQL 330
Query: 573 GCFDDAEQ---LIAEMPFKPDKTIWASMLKAC 601
GC++ A + L+ E F+P++ +++ML +C
Sbjct: 331 GCYERALEVLDLMQESGFEPNEVTYSNMLASC 362
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 354/680 (52%), Gaps = 41/680 (6%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFT-GNNLLSMYADFTSLNDAHKL 60
++ +++ LR C ++ SI++ K++H ++K +D+ N+ +Y+ + A +
Sbjct: 118 VQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGV 177
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM ++N+ SWT M+ T + + + ML G + P+ F YSA++++C
Sbjct: 178 FDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG-ILPDKFAYSAIIQSCIGLDS 236
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L+LG+++H +I + +LL+MY K GS+ D Y + N WN+
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE----DSYWVFNMMTEHNQVSWNA 292
Query: 181 MLSG----GKQVHAF----CVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M+SG G + AF +K G ++ TL S+ K +++ G + N E
Sbjct: 293 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELG 352
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL---WN 288
+ ++VG +AL+DMYS C L +AR +FD + + N + WN
Sbjct: 353 IEG--NVLVG---------TALIDMYSKCGSLHDARSVFD-------TNFINCGVNTPWN 394
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+MISGY + ++EA+ L + +G+ D YT+ S A + +F VHG+++
Sbjct: 395 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSL--QFGRVVHGMVL 452
Query: 349 TSGYELDYIVGSNLI-DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
G +L + +N I D Y++ G ++ ++F R+ ++D+V+W+ L+ ++ L A
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
F M NQF SSVL C+ L L G+QVH K G + E ++LIDMY
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 572
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG I + +F + D+VSWT II G Q+G ++A+ F+ M S +K N +T L
Sbjct: 573 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 632
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VL AC H G+VEE F M+ YG+ P +EHY C++DLLG+ G DDA + I +MP
Sbjct: 633 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 692
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+P++ +W ++L C H N +L I A ++L+ PE + YV+LSN Y G ++ +
Sbjct: 693 EPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSL 752
Query: 648 RKAGKKLGEKK-AGMSWIEV 666
R K G KK G SWI V
Sbjct: 753 RNVMKDQGVKKEPGYSWISV 772
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 354/680 (52%), Gaps = 41/680 (6%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFT-GNNLLSMYADFTSLNDAHKL 60
++ +++ LR C ++ SI++ K++H ++K +D+ N+ +Y+ + A +
Sbjct: 64 VQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGV 123
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM ++N+ SWT M+ T + + + ML G + P+ F YSA++++C
Sbjct: 124 FDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG-ILPDKFAYSAIIQSCIGLDS 182
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L+LG+++H +I + +LL+MY K GS+ D Y + N WN+
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE----DSYWVFNMMTEHNQVSWNA 238
Query: 181 MLSG----GKQVHAFCV----KRGFEKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M+SG G + AF + K G ++ TL S+ K +++ G + N E
Sbjct: 239 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELG 298
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL---WN 288
+ ++VG +AL+DMYS C L +AR +FD + + N + WN
Sbjct: 299 IEG--NVLVG---------TALIDMYSKCGSLHDARSVFD-------TNFINCGVNTPWN 340
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+MISGY + ++EA+ L + +G+ D YT+ S A + +F VHG+++
Sbjct: 341 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSL--QFGRVVHGMVL 398
Query: 349 TSGYELDYIVGSNLI-DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
G +L + +N I D Y++ G ++ ++F R+ ++D+V+W+ L+ ++ L A
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
F M NQF SSVL C+ L L G+QVH K G + E ++LIDMY
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 518
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG I + +F + D+VSWT II G Q+G ++A+ F+ M S +K N +T L
Sbjct: 519 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 578
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VL AC H G+VEE F M+ YG+ P +EHY C++DLLG+ G DDA + I +MP
Sbjct: 579 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 638
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+P++ +W ++L C H N +L I A ++L+ PE + YV+LSN Y G ++ +
Sbjct: 639 EPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSL 698
Query: 648 RKAGKKLGEKK-AGMSWIEV 666
R K G KK G SWI V
Sbjct: 699 RNVMKDQGVKKEPGYSWISV 718
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 214/662 (32%), Positives = 325/662 (49%), Gaps = 105/662 (15%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKL 160
PN F+ ++V++AC+ G ++ G +H + R + D + +L+D Y K G + R +
Sbjct: 35 PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLV 94
Query: 161 FDQY-----SNWAASAYG---------NVALWNSM------------------------L 182
FDQ W G ++ L+ M L
Sbjct: 95 FDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFL 154
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG- 241
GGKQ+HA+ ++RG E + + LID Y KC + G LF+ M ++++SWT +I G
Sbjct: 155 EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY 214
Query: 242 ------------------------CFEC-----SCFTLSAL------------------- 253
F C SC +L AL
Sbjct: 215 MQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNE 274
Query: 254 ------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+DMY+ N+L +A+K+FD A NV +N+MI GY E+ EA+ L
Sbjct: 275 FVKNGLIDMYAKSNLLXDAKKVFD------VMAEQNVISYNAMIEGYSSQEKLSEALELF 328
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ TF S L +L F + Q+HGLI+ G LD GS LID+Y+
Sbjct: 329 HEMRVRLFPPSLLTFVSLLGVSASL--FALELSKQIHGLIIKXGVSLDLFAGSALIDVYS 386
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ VK A +F + +KD+V W+ + G T+H N A L+ + S Q N+F ++
Sbjct: 387 KCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAA 446
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
++ S LASLR G+Q H VK G + +L+DMY KCG I++ +F RD
Sbjct: 447 LITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRD 506
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VV W +I Q+G A+EA+ F+EM++ ++PN +TF+ VLSAC HAG VE+ F
Sbjct: 507 VVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFN 566
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SM P +G++P EHY C+V LLG++G +A++ I +MP +P +W S+L AC N
Sbjct: 567 SM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNV 625
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEV 666
+L AE ++T P+D Y++LSN++A+ GMW + KVR + K+ G SWIEV
Sbjct: 626 ELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEV 685
Query: 667 SS 668
++
Sbjct: 686 NN 687
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 400 HGLNSLAYLLFRDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
G + A ++F D+ S + N+F+++SV++ C+ L + +G Q+H F V+ GF+++
Sbjct: 14 EGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 73
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
TSLID Y K G+I+ +F + E+ V+WT II G + GR+ ++ F +M ++
Sbjct: 74 VGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133
Query: 519 LKPNEITFLGVLSAC 533
+ P+ VLSAC
Sbjct: 134 VVPDRYVVSSVLSAC 148
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 233/761 (30%), Positives = 348/761 (45%), Gaps = 111/761 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V LR G R + QG+ +H RI+ GL +++ GN+LL +Y SL D ++F +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ SWTT++TAYT + + AI +++ M + G V + + AVLKAC+ GDL GR
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEG-VRCDAVTFLAVLKACARLGDLSQGR 148
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYS----NWAASAYGN----- 174
IH I LE +VL N LL +Y CG + LF++ +W A+ N
Sbjct: 149 SIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVSWNAAIAANAQSGD 208
Query: 175 ----VALWNSM---------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ M + + +H+ + G E+ V T+L
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALAS 268
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------------- 244
Y + G +D +F+ ERDVVSW ++ G +
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAML-GAYAQHGHMSEAALLFARMLHEGIPPSKV 327
Query: 245 --------CSCFTLSALV--------------------DMYSNCNVLCEARKLFDQYSSW 276
CS ++ DMY+ C EAR LF+
Sbjct: 328 TLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-- 385
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
GN WN+MI+G Q + A+ L + GM T+ + L+A + N
Sbjct: 386 -----GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVAS--NPE 438
Query: 337 SRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP---KKDVVA 389
A+ ++H IV+ GY + +G+ ++ +YA G + A F R + DVV+
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I ++HG A FR M NQ +VL C+ A+L G VH
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR 558
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEAI 508
G E T+L MY +CG ++ +F K ERDVV + +I QNG A EA+
Sbjct: 559 HSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEAL 618
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F M Q +P+E +F+ VLSAC H GL +E W IF SM+ YG+ P +HY C VD+
Sbjct: 619 KLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDV 678
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AG DAE+LI M KP +W ++L AC + + + + P D S Y
Sbjct: 679 LGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAY 738
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
V+LSN+ A G WD ++VR + G K+AG SWIE+ S
Sbjct: 739 VVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKS 779
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 215/683 (31%), Positives = 347/683 (50%), Gaps = 48/683 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL L+ C + + +++GK +H I G+ + G L+ MY +L + ++
Sbjct: 449 LDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRI 508
Query: 61 FDEMARKN-IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD + N + W M++ Y +I L+ M + G + N + +S +LK + G
Sbjct: 509 FDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLG-ITGNSYTFSCILKCFATLG 567
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+ + IH + + ++N+L+ Y K G + KLFD+ + +V
Sbjct: 568 RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR------DVVS 621
Query: 178 WNSMLSGGKQVHAFCVKRGFE-------------KEDVTLTSLIDMYLKCGEIDDGLALF 224
WNSM+SG CV GF + V L +L++ C + L+L
Sbjct: 622 WNSMISG-------CVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS-LSLG 673
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+ + V + CF + L+DMYS C L +A + F++ V
Sbjct: 674 RALHGQGVKA-------CFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ------KTV 720
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
W S+I+ YV ++AI L + S G+ D Y+ TS L AC + + VH
Sbjct: 721 VSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDK--GRDVH 778
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
I + L V + L+D+YA+ G+++ A +F ++P KD+V+W+ +I G +K+ L +
Sbjct: 779 NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPN 838
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF +M ++ + ++ +L C LA+L G+ +H ++ G+ E +LI
Sbjct: 839 EALKLFAEMQKESRP-DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALI 897
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY+KCG + LF +PE+D+++WT +I GCG +G EAIA FQ+M + +KP+EI
Sbjct: 898 DMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEI 957
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TF +L AC H+GL+ E W F SM E +EP LEHY CMVDLL + G A LI
Sbjct: 958 TFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIET 1017
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
MP KPD TIW ++L C H++ +L +AE + P++ YV+L+N+YA W+ +
Sbjct: 1018 MPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEV 1077
Query: 645 SKVR-KAGKKLGEKKAGMSWIEV 666
K+R + GK+ +K G SWIEV
Sbjct: 1078 KKLRERIGKRGLKKSPGCSWIEV 1100
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 222/705 (31%), Positives = 335/705 (47%), Gaps = 87/705 (12%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT-SNKRPNWAIRLYN 93
S + ++ N LS L+ A L M R+N VSW T+++A S A+ +Y
Sbjct: 71 SPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYG 130
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M G + P F ++VL AC L GR H + L+ + + N LL MY KC
Sbjct: 131 RMRAEGLL-PTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKC 189
Query: 154 GSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------------------------- 187
GS+ D + A N + +M+ G Q
Sbjct: 190 GSVG----DAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSV 245
Query: 188 --------------------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
+HA V++GF + SLIDMY KC E+D+ +
Sbjct: 246 SSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAV 305
Query: 222 ALFNFMPERDVVSWTGIIVG-CFECSCFTLSALVDM------------YSNCNVLC---- 264
+F +P +VSW +I G E SC ++ + YSN C
Sbjct: 306 KVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKAR 365
Query: 265 ---EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
AR +FD+ S +V WN+++SGY EQ+++ I L + + D T
Sbjct: 366 DVHSARAMFDKISR------PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 419
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
L +C L + F QVH V D V S L+D+Y++ G + A +F++
Sbjct: 420 LAVILSSCSKLGILD--FGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNK 477
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ ++DVV W+ +I G T H LN A+ F+ M + + +S++ CS L+S+ G
Sbjct: 478 MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG 537
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+HA +K G+++ ++LIDMY KCG +DD F M +++V+W +I G QN
Sbjct: 538 RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQN 597
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G +A+ F+ M+ + KP+ +TF+ VL+ C H+GLV++A F SM+ YG+ P EH
Sbjct: 598 GLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEH 657
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y C++D LG+AG F + E LI +MP K D IW +L AC H+N +L AE L
Sbjct: 658 YTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRID 717
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
P++PS YV+LSN+YA+LG S VR G K G SWI+
Sbjct: 718 PKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWID 762
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 180/408 (44%), Gaps = 42/408 (10%)
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+++Y + G L F +P + S+ + C L A D+
Sbjct: 49 LVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAA--CRAGDLDAARDLLGGM-----P 101
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCIDSYTFTSA 325
R+ N WN++IS + + EA+ + + + G+ +T S
Sbjct: 102 RR--------------NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASV 147
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L AC L + HG+ V G + + V + L+ +Y + G+V A+ LF+ + +
Sbjct: 148 LSACGGLAALGD--GRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARP 205
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--------SCLAS 437
+ V+++ ++ G + G A LF M S V+ +SSVL C S +
Sbjct: 206 NEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARA 265
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
R G+ +HA V++GF + SLIDMY KC E+D+ + +F+ +P +VSW +I G
Sbjct: 266 FRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITG 325
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLE 556
GQ G +A+ M ++ +PNE+T+ +L++C A V A +F + +P
Sbjct: 326 FGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTW 385
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKAC 601
L YC Q D +L M +PD+T A +L +C
Sbjct: 386 NTLLSGYC------QEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSC 427
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +H +++ L D+F + L+ MY+ + A +F++M +++
Sbjct: 424 LSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDV 483
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W ++++ T + A + M E G + P Y++++ +CS + GR IH
Sbjct: 484 VCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSCSRLSSIPHGRQIHA 542
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
++ ++ + + + + L+DMY KCG++ R FD N+ WN M+ G Q
Sbjct: 543 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM------MMKNIVAWNEMIHGYAQ 596
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + + + VT +++ G +D +A FN M
Sbjct: 597 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 645
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 333/669 (49%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S++ G+ LH ++K G S D + N L+S+Y +L A +F M++++
Sbjct: 255 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 314
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T++ + A+ L+ M +EP+ ++++ ACS G L G+ +H
Sbjct: 315 VTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
T+ + + LL++Y KC + L + + NV LWN ML +
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETAL----DYFLETEVENVVLWNVMLVAYGLLD 429
Query: 189 ---HAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++F + R + E++ T S++ ++ G+++ G + + II
Sbjct: 430 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-----------SQIIK 478
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A + ++ A +V W +MI+GY +
Sbjct: 479 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF------AGKDVVSWTTMIAGYTQYNFD 532
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
++A+T + G+ D T+A+ AC L Q+H SG+ D +
Sbjct: 533 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE--GQQIHAQACVSGFSSDLPFQN 590
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LY+R G ++ + F + D +AW+ L+ G + G N A +F M D
Sbjct: 591 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 650
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F S +K S A++++GKQVHA K G++ E +LI MY KCG I D F
Sbjct: 651 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 710
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ ++ VSW II ++G EA+ F +MI S ++PN +T +GVLSAC H GLV+
Sbjct: 711 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 770
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F SM EYGL P EHY C+VD+L +AG A++ I EMP KPD +W ++L A
Sbjct: 771 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A LL PED + YV+LSN+YA WD+ R+ K+ G KK
Sbjct: 831 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 890
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 891 GQSWIEVKN 899
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/677 (24%), Positives = 291/677 (42%), Gaps = 95/677 (14%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ +G+ LH +I+K GL + L Y L A K+FDEM + I +W M+
Sbjct: 60 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 119
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
S L+ M+ +V PN +S VL+AC S D+ IH RI + L
Sbjct: 120 ELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178
Query: 137 EYDTVLMNTLLDMYVKCG--SLTRKLFD-----QYSNWAASAYG---------------- 173
TV+ N L+D+Y + G L R++FD +S+W A G
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238
Query: 174 --------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++S+LS G+Q+H +K GF + +L+ +Y G
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 298
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC--------------------SCFTLSALVDM 256
+ +F+ M +RD V++ +I G +C TL++LV
Sbjct: 299 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 358
Query: 257 YSNCNVLCEARK-------------------LFDQYSSWA----------ASAYGNVALW 287
S L ++ L + Y+ A + NV LW
Sbjct: 359 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 418
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N M+ Y L + + + + + + YT+ S LK CI L + Q+H I
Sbjct: 419 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGEQIHSQI 476
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + ++L+ V S LID+YA+LG + +A ++ R KDVV+W+ +I G T++ + A
Sbjct: 477 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
FR M++ ++ +++ + C+ L +L+ G+Q+HA GF + +L+ +Y
Sbjct: 537 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+CG+I++ F+ D ++W ++ G Q+G +EA+ F M + + N TF
Sbjct: 597 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 656
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+ A +++ + + + G + E ++ + + G DAE+ E+
Sbjct: 657 SAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715
Query: 588 KPDKTIWASMLKACETH 604
K ++ W +++ A H
Sbjct: 716 K-NEVSWNAIINAYSKH 731
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 205/491 (41%), Gaps = 82/491 (16%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--- 235
N L G+++H+ +K G + L D YL G++ +F+ MPER + +W
Sbjct: 58 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 117
Query: 236 --------------------------------TGIIVGCFECSC-----------FTLSA 252
+G++ C S
Sbjct: 118 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 177
Query: 253 LVDMYSNCNVLCE----------ARKLFD-----QYSSWAASAYGNVALWNSMISGYVLN 297
L D CN L + AR++FD +SSW A MISG N
Sbjct: 178 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA-----------MISGLSKN 226
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E EAI L ++ G+ Y F+S L AC + + Q+HGL++ G+ D
Sbjct: 227 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL--EIGEQLHGLVLKLGFSSDTY 284
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + L+ LY LGN+ SA +F + ++D V ++ LI G ++ G A LF+ M
Sbjct: 285 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 344
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + ++S++ CS +L RG+Q+HA+ K GF + +L+++Y KC +I+ L
Sbjct: 345 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 404
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F +VV W ++V G + + F++M + PN+ T+ +L C G
Sbjct: 405 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 464
Query: 538 LVEEAWTIFTS-MKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+E I + +K + L Y C ++D+ + G D A ++ K D W
Sbjct: 465 DLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSW 519
Query: 595 ASMLKACETHN 605
+M+ +N
Sbjct: 520 TTMIAGYTQYN 530
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 210/501 (41%), Gaps = 63/501 (12%)
Query: 195 RGFEKEDVTLTSLIDMYLKC-GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
RG TL L++ LK G +D+G L + + + +G C + L
Sbjct: 38 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI----------LKLGLDSNGCLS-EKL 86
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
D Y L A K+FD+ + WN MI E L + S
Sbjct: 87 FDFYLFKGDLYGAFKVFDEMPERT------IFTWNKMIKELASRNLIGEVFGLFVRMVSE 140
Query: 314 GMCIDSYTFTSALKACIN-LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ + TF+ L+AC + F+ Q+H I+ G +V + LIDLY+R G V
Sbjct: 141 NVTPNEGTFSGVLEACRGGSVAFD--VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 198
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F L KD +W +I G +K+ + A LF DM + SSVL C
Sbjct: 199 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 258
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ SL G+Q+H +K GF + +L+ +Y G + +F M +RD V++
Sbjct: 259 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 318
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV-----EEAWTI-- 545
+I G Q G ++A+ F+ M L+P+ T ++ AC G + A+T
Sbjct: 319 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 378
Query: 546 -FTSMKP-------------------EYGLEPHLEHYYCMVDLLGQAGCFDDAE---QLI 582
F S +Y LE +E+ +L G DD ++
Sbjct: 379 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 438
Query: 583 AEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYAT 637
+M + P++ + S+LK C + +L I Q++ T+ + + YV +L ++YA
Sbjct: 439 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAK 497
Query: 638 LG----MWDSLSKVRKAGKKL 654
LG WD L +R AGK +
Sbjct: 498 LGKLDTAWDIL--IRFAGKDV 516
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A+ C +++K+G+ +H + G S D+ N L+++Y+ + +++ F++
Sbjct: 554 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ ++W +V+ + + A+R++ M G ++ N F + + +KA S + ++ G+
Sbjct: 614 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGK 672
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-- 183
+H IT+ + +T + N L+ MY KCGS++ D + + N WN++++
Sbjct: 673 QVHAVITKTGYDSETEVCNALISMYAKCGSIS----DAEKQFLEVSTKNEVSWNAIINAY 728
Query: 184 -----GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G + + +F + VTL ++ G +D G+A F M +S
Sbjct: 729 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 788
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
C +VDM + +L A++ + + +W +++S V+
Sbjct: 789 PEHYVC----------VVDMLTRAGLLSRAKEFIQE-----MPIKPDALVWRTLLSACVV 833
Query: 297 NEQNE 301
++ E
Sbjct: 834 HKNME 838
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 333/669 (49%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S++ G+ LH ++K G S D + N L+S+Y +L A +F M++++
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T++ + A+ L+ M +EP+ ++++ ACS G L G+ +H
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
T+ + + LL++Y KC + L + + NV LWN ML +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETAL----DYFLETEVENVVLWNVMLVAYGLLD 469
Query: 189 ---HAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++F + R + E++ T S++ ++ G+++ G + + II
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-----------SQIIK 518
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A + ++ A +V W +MI+GY +
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF------AGKDVVSWTTMIAGYTQYNFD 572
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
++A+T + G+ D T+A+ AC L Q+H SG+ D +
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE--GQQIHAQACVSGFSSDLPFQN 630
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LY+R G ++ + F + D +AW+ L+ G + G N A +F M D
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F S +K S A++++GKQVHA K G++ E +LI MY KCG I D F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ ++ VSW II ++G EA+ F +MI S ++PN +T +GVLSAC H GLV+
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F SM EYGL P EHY C+VD+L +AG A++ I EMP KPD +W ++L A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A LL PED + YV+LSN+YA WD+ R+ K+ G KK
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 931 GQSWIEVKN 939
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/677 (24%), Positives = 291/677 (42%), Gaps = 95/677 (14%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ +G+ LH +I+K GL + L Y L A K+FDEM + I +W M+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
S L+ M+ +V PN +S VL+AC S D+ IH RI + L
Sbjct: 160 ELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 137 EYDTVLMNTLLDMYVKCG--SLTRKLFD-----QYSNWAASAYG---------------- 173
TV+ N L+D+Y + G L R++FD +S+W A G
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 174 --------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++S+LS G+Q+H +K GF + +L+ +Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC--------------------SCFTLSALVDM 256
+ +F+ M +RD V++ +I G +C TL++LV
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 257 YSNCNVLCEARK-------------------LFDQYSSWA----------ASAYGNVALW 287
S L ++ L + Y+ A + NV LW
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N M+ Y L + + + + + + YT+ S LK CI L + Q+H I
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGEQIHSQI 516
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + ++L+ V S LID+YA+LG + +A ++ R KDVV+W+ +I G T++ + A
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
FR M++ ++ +++ + C+ L +L+ G+Q+HA GF + +L+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+CG+I++ F+ D ++W ++ G Q+G +EA+ F M + + N TF
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+ A +++ + + + G + E ++ + + G DAE+ E+
Sbjct: 697 SAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 588 KPDKTIWASMLKACETH 604
K ++ W +++ A H
Sbjct: 756 K-NEVSWNAIINAYSKH 771
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 205/491 (41%), Gaps = 82/491 (16%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--- 235
N L G+++H+ +K G + L D YL G++ +F+ MPER + +W
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 236 --------------------------------TGIIVGCFECSC-----------FTLSA 252
+G++ C S
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 253 LVDMYSNCNVLCE----------ARKLFD-----QYSSWAASAYGNVALWNSMISGYVLN 297
L D CN L + AR++FD +SSW A MISG N
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA-----------MISGLSKN 266
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E EAI L ++ G+ Y F+S L AC + + Q+HGL++ G+ D
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL--EIGEQLHGLVLKLGFSSDTY 324
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + L+ LY LGN+ SA +F + ++D V ++ LI G ++ G A LF+ M
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + ++S++ CS +L RG+Q+HA+ K GF + +L+++Y KC +I+ L
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F +VV W ++V G + + F++M + PN+ T+ +L C G
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 538 LVEEAWTIFTS-MKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+E I + +K + L Y C ++D+ + G D A ++ K D W
Sbjct: 505 DLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSW 559
Query: 595 ASMLKACETHN 605
+M+ +N
Sbjct: 560 TTMIAGYTQYN 570
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 210/501 (41%), Gaps = 63/501 (12%)
Query: 195 RGFEKEDVTLTSLIDMYLKC-GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
RG TL L++ LK G +D+G L + + + +G C + L
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI----------LKLGLDSNGCLS-EKL 126
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
D Y L A K+FD+ + WN MI E L + S
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPE------RTIFTWNKMIKELASRNLIGEVFGLFVRMVSE 180
Query: 314 GMCIDSYTFTSALKACIN-LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ + TF+ L+AC + F+ Q+H I+ G +V + LIDLY+R G V
Sbjct: 181 NVTPNEGTFSGVLEACRGGSVAFD--VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F L KD +W +I G +K+ + A LF DM + SSVL C
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ SL G+Q+H +K GF + +L+ +Y G + +F M +RD V++
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV-----EEAWTI-- 545
+I G Q G ++A+ F+ M L+P+ T ++ AC G + A+T
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 546 -FTSMKP-------------------EYGLEPHLEHYYCMVDLLGQAGCFDDAE---QLI 582
F S +Y LE +E+ +L G DD ++
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 583 AEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYAT 637
+M + P++ + S+LK C + +L I Q++ T+ + + YV +L ++YA
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAK 537
Query: 638 LG----MWDSLSKVRKAGKKL 654
LG WD L +R AGK +
Sbjct: 538 LGKLDTAWDIL--IRFAGKDV 556
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A+ C +++K+G+ +H + G S D+ N L+++Y+ + +++ F++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ ++W +V+ + + A+R++ M G ++ N F + + +KA S + ++ G+
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGK 712
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-- 183
+H IT+ + +T + N L+ MY KCGS++ D + + N WN++++
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSIS----DAEKQFLEVSTKNEVSWNAIINAY 768
Query: 184 -----GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G + + +F + VTL ++ G +D G+A F M +S
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
C +VDM + +L A++ + + +W +++S V+
Sbjct: 829 PEHYVC----------VVDMLTRAGLLSRAKEFIQE-----MPIKPDALVWRTLLSACVV 873
Query: 297 NEQNE 301
++ E
Sbjct: 874 HKNME 878
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 356/745 (47%), Gaps = 91/745 (12%)
Query: 4 RRIVEALRH--------CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN 55
R V A RH C S +SLH +K GL D+F L+++YA F +
Sbjct: 720 RSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIR 779
Query: 56 DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC 115
+A LFD M +++V W M+ AY A+ L++ G + P+ + +
Sbjct: 780 EARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG-LRPDDVTLCTLARVV 838
Query: 116 SLSGDLDLGRLIHERITREKL--------EYDTVLMNTLLDMYVKCGSLTRKL---FDQY 164
++ +L + KL D + N L +++ G + D
Sbjct: 839 KSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMI 898
Query: 165 SNWAASAYGNVALWNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
++ A + S+++G GKQ+H V+ G ++ LI+MY+K G +
Sbjct: 899 NSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVS 958
Query: 219 DGLALFNFMPERDVVSWTGIIVGCF-----ECSC-------------------------- 247
+F M E D+VSW +I GC ECS
Sbjct: 959 RARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACS 1018
Query: 248 -------------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
F + L+D+YS + EA LF +
Sbjct: 1019 SLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF------ 1072
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
++A WN+M+ GY+++ +A+ L + SG + T +A KA L+ Q
Sbjct: 1073 DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQ--GKQ 1130
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+ ++V G+ LD V S ++D+Y + G ++SA +F+ +P D VAW+ +I GC ++G
Sbjct: 1131 IQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQ 1190
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A + M S +++ ++++K CS L +L +G+Q+HA VK + +TS
Sbjct: 1191 EEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTS 1250
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+DMY KCG I+D LFK + SW +IVG Q+G A+EA+ +F+EM + P+
Sbjct: 1251 LVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPD 1310
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF+GVLSAC H+GLV EA+ F SM+ YG+EP +EHY C+VD L +AG +AE++I
Sbjct: 1311 RVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVI 1370
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
+ MPF+ +++ ++L AC + + +AE+LLA P D + YV+LSNVYA W+
Sbjct: 1371 SSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWE 1430
Query: 643 SLSKVRKAGKKLGEKK-AGMSWIEV 666
+++ R +K KK G SW+++
Sbjct: 1431 NVASARNMMRKANVKKDPGFSWVDL 1455
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 174/679 (25%), Positives = 292/679 (43%), Gaps = 98/679 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA--RK 67
LRH + GK H RI+ G D F NNL++MY+ SL+ A KLFD +
Sbjct: 633 LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSR 692
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++V+W +++A+ R + + +L V + V K C LS +
Sbjct: 693 DLVTWNAILSAHADKARDGFHLF---RLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + L++D + L+++Y K G + R LFD +V LWN M+
Sbjct: 750 HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFD------GMGLRDVVLWNVMMKAY 803
Query: 185 ---GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDD---------GLALFNFM 227
G + A + + G +DVTL +L + + + G LF +
Sbjct: 804 VDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYD 863
Query: 228 PE---RDVVSWTGII------------VGCF--------ECSCFTLSALVDMYSNCNVLC 264
+ DV++W + V CF C T ++ + + N L
Sbjct: 864 DDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLE 923
Query: 265 EARKL--------FDQYSS----------------------WAASAYGNVALWNSMISGY 294
+++ DQ S W + V+ WN+MISG
Sbjct: 924 LGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVS-WNTMISGC 982
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
L+ E ++ + + G+ D +T S L+AC + L A Q+H + +G L
Sbjct: 983 ALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS-LGGGCHLATQIHACAMKAGVVL 1041
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V + LID+Y++ G ++ A LF D+ +W+ ++ G G A L+ M
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S + NQ +++ K L L++GKQ+ A VKRGF + ++ ++DMYLKCGE++
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F +P D V+WT +I GC +NG+ + A+ + M S+++P+E TF ++ AC
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221
Query: 535 HAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT- 592
+E+ I ++K +P + +VD+ + G +DA L FK T
Sbjct: 1222 LLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGL-----FKRTNTS 1274
Query: 593 ---IWASMLKACETHNNTK 608
W +M+ H N +
Sbjct: 1275 RIASWNAMIVGLAQHGNAE 1293
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 82/599 (13%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN- 166
++L+ + DL LG+ H RI D L N L+ MY KCGSL+ RKLFD +
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 167 ------WAA--SAYGNVA-----------------------------LWNSMLSGGKQVH 189
W A SA+ + A L ++ S + +H
Sbjct: 691 SRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
+ VK G + + +L+++Y K G I + LF+ M RDVV W +++ + +
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWN-VMMKAYVDTGLE 809
Query: 250 LSALVDMYSNCN---------VLCEARKLFDQYSS---W---AASAYG------------ 282
AL+ ++S N LC ++ + W AYG
Sbjct: 810 YEALL-LFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDG 868
Query: 283 -NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK--ACINLLNFNSRF 339
+V WN +S ++ + EA+ + +S + D TF L A +N L
Sbjct: 869 SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGK-- 926
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q+HG++V SG + VG+ LI++Y + G+V A +F ++ + D+V+W+ +I GC
Sbjct: 927 --QIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL-ASLRRGKQVHAFCVKRGFEKEDI 458
GL + +F D++ +QF ++SVL+ CS L Q+HA +K G +
Sbjct: 985 SGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF 1044
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
T+LID+Y K G++++ LF D+ SW ++ G +G +A+ + M +S
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104
Query: 519 LKPNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ N+IT A GLV + ++ + G L ++D+ + G +
Sbjct: 1105 ERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMES 1162
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A ++ E+P PD W +M+ C N + ++ + S P +Y + V A
Sbjct: 1163 ARRIFNEIP-SPDDVAWTTMISGC-VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKA 1219
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 353/692 (51%), Gaps = 92/692 (13%)
Query: 12 HCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD--FTSLNDAHKLFDEMARKNI 69
H ++KQ + ++I G D F + LL D F L+ + ++FD + N
Sbjct: 47 HLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNG 106
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W TM+ AY + A+ LY M++ +V P+ + Y V++AC++ G+ IH+
Sbjct: 107 FMWNTMMRAYIQSNSAEKALLLYKLMVK-NNVGPDNYTYPLVVQACAVRLLEFGGKEIHD 165
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + + D + NTL++MY CG++ RKLFD+ S + WNS+L+G
Sbjct: 166 HVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE------SPVLDSVSWNSILAG--- 216
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
Y+K G++++ +F+ MP+R++V+ +IV
Sbjct: 217 -----------------------YVKKGDVEEAKLIFDQMPQRNIVASNSMIV------- 246
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+ + EA KLF++ ++ W+++ISGY N EEA+ +
Sbjct: 247 --------LLGKMGQVMEAWKLFNEMDE------KDMVSWSALISGYEQNGMYEEALVMF 292
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE-------------- 353
++++GM +D S L AC +L + +HGL++ G E
Sbjct: 293 IEMNANGMRLDEVVVVSVLSACAHLSIVKT--GKMIHGLVIRMGIESYVNLQNALIHMYS 350
Query: 354 -----------------LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
LD I +++I + G+V+ A LF +P+KD+V+WS +I G
Sbjct: 351 GSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISG 410
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+H S LF +M ++ I+ SV+ C+ LA+L +GK VHA+ K G +
Sbjct: 411 YAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVN 470
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
I T+L+DMY+KCG +++ L +F M E+ V SW +I+G NG + ++ F EM
Sbjct: 471 VILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN 530
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+ + PNEITF+GVL ACRH GLV+E F SM ++G+EP+++HY CMVDLLG+AG +
Sbjct: 531 NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 590
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+AE+LI MP PD W ++L AC+ H +T++ + +L+ P+ +V+LSN++A
Sbjct: 591 EAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFA 650
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ G W+ + +VR K+ G K G S IE +
Sbjct: 651 SKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 682
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 52/327 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK- 59
+D +V L C +K GK +H +I+ G+ + N L+ MY+ + DA K
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 60 ------------------------------LFDEMARKNIVSWTTMVTAYTSNKRPNWAI 89
LFD M K+IVSW+ +++ Y + + +
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
L+ H ++ G + P+ + +V+ AC+ LD G+ +H I + L+ + +L TLLDM
Sbjct: 422 ALF-HEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDM 480
Query: 150 YVKCGSLTRKL--FDQYSNWAASAYGNVALW---NSMLSGGKQVHAFCVKRGFEKEDVTL 204
Y+KCG + L F+ S++ + + N ++ + + G ++T
Sbjct: 481 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITF 540
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
++ G +D+G F M E+ + GC +VD+ +L
Sbjct: 541 MGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC----------MVDLLGRAGLLN 590
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMI 291
EA KL + + +VA W +++
Sbjct: 591 EAEKLIE-----SMPMAPDVATWGALL 612
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C ++ QGK +H I K GL ++ G LL MY + +A ++F+ M
Sbjct: 439 LVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME 498
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K + SW ++ N ++ +++ M G + PN + VL AC G +D GR
Sbjct: 499 EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVI-PNEITFMGVLGACRHMGLVDEGR 557
Query: 126 L-IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
I + +E + ++D+ + G L KL + + +VA W ++L
Sbjct: 558 CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE-----SMPMAPDVATWGALL 612
Query: 183 SGGKQ 187
K+
Sbjct: 613 GACKK 617
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 224/753 (29%), Positives = 361/753 (47%), Gaps = 111/753 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ G+R+ I+ G+ +H + L D +++MYA S +D+ FD + KN
Sbjct: 91 LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKN 150
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W ++++Y+ N+ + + ++ M+ + P+ F + V+KAC+ D+ +G +H
Sbjct: 151 LFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVH 210
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML---- 182
+ + L D + N L+ Y G ++ KLFD N+ WNSM+
Sbjct: 211 GLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE------RNLVSWNSMIRVFS 264
Query: 183 ----------------------------SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
GK VH + VK +KE V +L+DMY K
Sbjct: 265 DNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKW 324
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVG--------------------------------- 241
G I D +F ++VVSW ++ G
Sbjct: 325 GCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILN 384
Query: 242 ----CF---------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQYSSWA 277
CF E C++L +A V Y+ C L A+++F S
Sbjct: 385 AVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKT 444
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH--SSGMCIDSYTFTSALKACINLLNF 335
++ WN++I GY + ++ ++L +H+ +SG+ D++T S L AC L +
Sbjct: 445 LNS------WNALIGGYA--QSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSL 496
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
R +VHG I+ + E D V +++ LY G + + LF + +V+W+ +I
Sbjct: 497 --RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G ++G A LFR M+ + +V CS L SLR G++ HA+ +K E
Sbjct: 555 GHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLED 614
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
S+IDMY K G I +F + E+ SW +I+G G +GRAKEAI F+EM
Sbjct: 615 NAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQ 674
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
++ P+++TFLGVL+AC H+GL+ E MK +GL+P+L+HY C++D+LG+AG
Sbjct: 675 RTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 734
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A ++ AEM +PD IW S+L C H N ++ +A +L PE P YV+LSN+Y
Sbjct: 735 DNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLY 794
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
A LG WD + +VR+ K++ K AG SWIE++
Sbjct: 795 AGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELN 827
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 202/499 (40%), Gaps = 110/499 (22%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + R I GK +H +K L +++ N L+ MY+ + + D+ +F
Sbjct: 275 DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIF 334
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS--VEPNGFMYSAVLKACSLSG 119
KN+VSW TMV +++ + L ML GS V+ + + C
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLA-GSEDVKADEVTILNAVPVCFDES 393
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD--------------- 162
L + +H +++ YD +L N + Y KCGSL+ +++F
Sbjct: 394 VLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIG 453
Query: 163 ---QYSNWAASAYGNVALWN-----------SMLSG---------GKQVHAFCVKRGFEK 199
Q S+ S ++ + N S+LS GK+VH F ++ E+
Sbjct: 454 GYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 513
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF---------------- 243
+ S++ +Y+ CGE+ LF+ M + +VSW +I G
Sbjct: 514 DLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMV 573
Query: 244 ----------------------------ECSCFTLSALVD-----------MYSNCNVLC 264
E + L L++ MY+ +
Sbjct: 574 LYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAIT 633
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
++ K+F+ +A++ WN+MI GY ++ + +EAI L + +G D TF
Sbjct: 634 QSSKVFNGLKEKSAAS------WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLG 687
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L AC + LL+ R+ Q+ + G + + + +ID+ R G + +AL + +
Sbjct: 688 VLTACNHSGLLHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEM 744
Query: 383 PKK-DVVAWSGLIMGCTKH 400
++ DV W+ L+ C H
Sbjct: 745 SEEPDVGIWNSLLSWCRIH 763
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 353/670 (52%), Gaps = 51/670 (7%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
++ +G+ +H + +GL ++F G++L+++YA +DA +FD KNIV W M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T + N+ P AIR++ +M+ Y +++ + F + ++L AC+ LG+ +H + +
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFC 192
+ + N LDMY K G++ D + ++ Y + WN++ G Q A C
Sbjct: 458 DISLFVANATLDMYSKYGAIG----DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 193 -VKR----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--- 244
+KR G +DV+ ++ I+ C I + TG + C
Sbjct: 514 MLKRMRLHGITPDDVSFSTAIN---ACSNIR--------------ATETGKQIHCLAIKY 556
Query: 245 --CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
CS + S+L+D+YS + +RK+F Q + ++ N++I+G+V N +
Sbjct: 557 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA------SSIVPINALIAGFVQNNNED 610
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVG 359
EAI L + G+ S TF+S L C LN S QVH + SG Y+ D ++G
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN--SAIGKQVHCYTLKSGVLYD-DTLLG 667
Query: 360 SNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+L +Y + ++ A +L +P K++ W+ +I G ++G + + F M + N
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ +SVLK CS + + GK++H K GF + ++LIDMY KCG++
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 479 LFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
FK + ++D++ W +IVG +NG A EA+ FQ+M + ++KP+E+TFLGVL AC H+G
Sbjct: 788 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 847
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L+ E F SM+ YGL P L+HY C +DLLG+ G +A++ I ++PF+PD +WA+
Sbjct: 848 LISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 907
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC H + + I A +L+ P+ S YV+LS+++A G W R++ ++ G
Sbjct: 908 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 967
Query: 658 K-AGMSWIEV 666
K G SWI V
Sbjct: 968 KFPGCSWITV 977
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 160/657 (24%), Positives = 282/657 (42%), Gaps = 84/657 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +HC ++K G S +F L+ MYA + +A ++FD +A +
Sbjct: 165 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDT 224
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W++M+ Y A+ L++ M + GS P+ ++ + SG LD + +
Sbjct: 225 ICWSSMIACYHRVGCYQEALALFSRMDKMGSA-PDQVTLVTIISTLASSGRLDHATALLK 283
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ TV N ++ + + G L+ +W + + + SMLS
Sbjct: 284 KMPTPS----TVAWNAVISGHAQSGLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAAN 337
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+Q+HA V G + +SLI++Y KCG D +F+ E+++V W +
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397
Query: 239 IVG-----------------------------------CFECSCFTL------------- 250
+ G C S F L
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 251 -------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+A +DMYS + +A+ LF Y + WN++ G N + EEA
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIP------YKDSISWNALTVGLAQNLEEEEA 511
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ +L + G+ D +F++A+ AC N+ + Q+H L + G ++ VGS+LI
Sbjct: 512 VCMLKRMRLHGITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLI 569
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
DLY++ G+V+S+ ++F ++ +V + LI G ++ A LF+ ++ +
Sbjct: 570 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 629
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKF 482
SS+L CS + GKQVH + +K G +D L SL +YLK ++D L
Sbjct: 630 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 689
Query: 483 MPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
MP+ +++ WT II G QNG ++ F M ++ +E TF VL AC +
Sbjct: 690 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 749
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + G + ++D+ + G + + E+ K D W SM+
Sbjct: 750 GKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/577 (23%), Positives = 243/577 (42%), Gaps = 68/577 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + ++LH RI++ G G++L+ +Y + A + + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ + + P + + ++ P+ F + VL ACS G L GR +H + +
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF--- 191
L+DMY KCG + R++FD A + W+SM++ +V +
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFD------GIACPDTICWSSMIACYHRVGCYQEA 243
Query: 192 ------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
K G + VTL ++I G +D AL MP V+W +I G +
Sbjct: 244 LALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 303
Query: 246 SC--------------------FTLSALVDMYSNCNVLCEARKLF--------------- 270
T ++++ +N E +++
Sbjct: 304 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363
Query: 271 --------------DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
D + + S N+ +WN+M++G+V NE EEAI + ++ +
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D +TF S L AC L +F QVH + + + ++ V + +D+Y++ G + A
Sbjct: 424 TDEFTFVSILGACTYLSSF--YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF +P KD ++W+ L +G ++ A + + M + S+ + CS +
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ GKQ+H +K G +SLID+Y K G+++ +F + +V +I
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
G QN EAI FQ++++ LKP+ +TF +LS C
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII- 239
+L+ G+QVH VK GF +L+DMY KCG++ + +F+ + D + W+ +I
Sbjct: 173 VLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIA 232
Query: 240 ----VGCFECSCFTLSAL---------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
VGC++ + S + V + + + L + +L + +
Sbjct: 233 CYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVA 292
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN++ISG+ + + L + S G+ TF S L A N+ F Q+H
Sbjct: 293 WNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE--GQQMHAA 350
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
V G + + VGS+LI+LYA+ G A +F +K++V W+ ++ G ++ L A
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEA 410
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+F+ M+ ++F S+L C+ L+S GKQVH +K + + +DM
Sbjct: 411 IRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDM 470
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G I D ALF +P +D +SW + VG QN +EA+ + M + P++++F
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
++AC + E I + +YG+ + ++DL + G + + ++ A++
Sbjct: 531 STAINACSNIRATETGKQIHC-LAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVD 589
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
I A + + +N + + + + L
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 195/498 (39%), Gaps = 115/498 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C S GK +HC IK + +F N L MY+ + ++ DA LF +
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +SW + N A+ + M +G + P+ +S + ACS + G+
Sbjct: 489 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGK 547
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------------- 164
IH + + + + ++L+D+Y K G + +RK+F Q
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607
Query: 165 -SNWAASAYGNV---------ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL- 204
+ A + V ++S+LSG GKQVH + +K G +D L
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVG---------------------- 241
SL +YLK ++D L MP+ +++ WT II G
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 242 -------------CFECSCF--------------------TLSALVDMYSNCNVLCEARK 268
C + + F SAL+DMYS C + + +
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F + + ++ WNSMI G+ N +EA+ L + + D TF L A
Sbjct: 788 AFKELKNKQ-----DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIA 842
Query: 329 CIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
C + L++ F +V+GL LD+ + IDL R G+++ A E +LP
Sbjct: 843 CTHSGLISEGRHFFGSMRKVYGLTP----RLDHY--ACFIDLLGRGGHLQEAQEAIDQLP 896
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W+ + C H
Sbjct: 897 FRPDGVVWATYLAACRMH 914
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 9/269 (3%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+S+ +HG I+ G L +G +L++LY + G V A ++ A S L+
Sbjct: 71 HSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLS 130
Query: 396 GCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+ G FR + + +QF ++ VL CS + L G+QVH VK GF
Sbjct: 131 CHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 190
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+DMY KCG++ + +F + D + W+ +I + G +EA+A F M
Sbjct: 191 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 250
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ P+++T + ++S +G ++ A + M P + ++ Q+G
Sbjct: 251 DKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGL 305
Query: 575 FDDAEQLIAEM---PFKPDKTIWASMLKA 600
+ L +M P ++ +ASML A
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSA 334
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ C + GK +H I K G + L+ MY+ + + + F
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 789
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
E+ K +I+ W +M+ + N + A+ L+ M E ++P+ + VL AC+ SG
Sbjct: 790 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGL 848
Query: 121 LDLGR 125
+ GR
Sbjct: 849 ISEGR 853
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/668 (31%), Positives = 332/668 (49%), Gaps = 82/668 (12%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L I L C +S+ QGK LH I G + L++ Y+ F+ L DAH +
Sbjct: 41 LHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITV 100
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
N + W ++++Y +N A+ Y M+ G V P+ F Y +VLKAC DLD
Sbjct: 101 NSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKG-VRPDNFTYPSVLKACGEKLDLD 159
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
GR +HE I +AYG+ WN
Sbjct: 160 FGREVHESIN-------------------------------------AAYGH--RWN--- 177
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
VH SL+ MY K GE+D LFN MPERD VSW GII
Sbjct: 178 ---LYVH---------------NSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISN- 218
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ + EA +LF++ A A N+ WN++ G V +
Sbjct: 219 --------------YASRGLWKEAFELFEEMR--LAGAEVNIITWNTIAGGCVQTRNFKG 262
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ LLS + + +D L AC ++ + +H + S ++ V + L
Sbjct: 263 ALELLSQMRRCDIDLDPVAMIIGLGACSHIGAI--KLGTVIHASAIRSCFDGFDNVRNAL 320
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I +Y+R +++ A LF + K + W+ ++ G T + A LFR+M+ S + N
Sbjct: 321 ITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNY 380
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
I+S+L C+ +A+L++GK+ H + ++R GFE + SL++MY + G++ +F
Sbjct: 381 VTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFD 440
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ RD V++T +I G G G K A+ F EMI+ R+KP+++T + VLSAC H+GLV E
Sbjct: 441 SLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTE 500
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+F M YG+ P +EH+ CMVDL G+AG + A+++I MP++P +WA+++ AC
Sbjct: 501 GNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGAC 560
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-G 660
H NT++ AE+LL PE+P YV+++N++A G W L++VR + LG +KA G
Sbjct: 561 RIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPG 620
Query: 661 MSWIEVSS 668
+W++V S
Sbjct: 621 CTWVDVGS 628
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
++N+D ISS+L C+ L SL +GKQ+HA + GFE + + L+ Y +
Sbjct: 34 SANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLA 93
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D + + + W +I NG EA++ ++EM+ ++P+ T+ VL AC
Sbjct: 94 DAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACG 153
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
++ + S+ YG +L + +V + G+ G D A +L +MP + D W
Sbjct: 154 EKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPER-DAVSW 212
Query: 595 ASML 598
++
Sbjct: 213 NGII 216
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 345/657 (52%), Gaps = 39/657 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H RI+K GL D G +LL MY + L+DA K+FDE+ +++VSW+++V Y
Sbjct: 121 GRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVE 180
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N RP + + M+ G V P+ +V +AC G L L + +H + R+++ D
Sbjct: 181 NGRPREGLEMLRWMVSEG-VGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDAS 239
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-----CVK 194
L N+L+ MY +C L + +F+ S+ + A W SM+S Q F K
Sbjct: 240 LRNSLIVMYGQCSYLRGAKGMFESVSD------PSTACWTSMISSCNQNGCFEEAIDAFK 293
Query: 195 RGFEKE----DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ E E VT+ S++ + G + +G ++ F+ R++ + +G
Sbjct: 294 KMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREM-DGADLDLG--------- 343
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
AL+D Y+ C + KL +V WN++IS Y NEEA+ L +
Sbjct: 344 PALMDFYAACWKISSCEKLL------CLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCM 397
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ DS++ S++ AC + RF Q+HG + G+ D V ++L+D+Y++ G
Sbjct: 398 LEKGLMPDSFSLASSISACAGASSV--RFGQQIHGHVTKRGFA-DEFVQNSLMDMYSKCG 454
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
V A +F ++ +K +V W+ +I G +++G++ A LF +M + D+N+ S ++
Sbjct: 455 FVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQ 514
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS L +GK +H V G +K+ T+L+DMY KCG++ +F MPE+ VVS
Sbjct: 515 ACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVS 574
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W+ +I G +G+ A F +M++S +KPNE+TF+ +LSACRHAG VEE F SM+
Sbjct: 575 WSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMR 634
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+YG+ P+ EH+ +VDLL +AG D A ++I D +IW ++L C H L+
Sbjct: 635 -DYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLI 693
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
I ++L D Y +LSN+YA G W KVR + +G KK G S IE+
Sbjct: 694 HNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIEI 750
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 189/463 (40%), Gaps = 124/463 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++ L C + +K+GKS+HC I++ + D+ G L+ YA ++ KL +
Sbjct: 307 MISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLI 366
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++VSW T+++ Y A+ L+ MLE G + P+ F ++ + AC+ + + G
Sbjct: 367 GNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKG-LMPDSFSLASSISACAGASSVRFG 425
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSML 182
+ IH +T+ D + N+L+DMY KCG L +FD+ W S + WN M+
Sbjct: 426 QQIHGHVTKRGFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKI--WEKS----IVTWNCMI 478
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
G GK +H V G +
Sbjct: 479 CGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQ 538
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
K+ T+L+DMY KCG++ +FN MPE+ VVSW+ +I
Sbjct: 539 KDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMI------------------- 579
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+AYG ++ Q A TL + + S + +
Sbjct: 580 --------------------AAYG-------------IHGQITAATTLFTKMVESHIKPN 606
Query: 319 SYTFTSALKACINL-------LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
TF + L AC + FNS ++ +G++ + + ++++DL +R G+
Sbjct: 607 EVTFMNILSACRHAGSVEEGKFYFNS---MRDYGIVPNAEHF------ASIVDLLSRAGD 657
Query: 372 VKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ A E+ + D W L+ GC HG L + + +++
Sbjct: 658 IDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKEL 700
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 7/264 (2%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H +V +G D + + L++ YAR+G++ S+ +F P D + LI H
Sbjct: 19 QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHH 78
Query: 402 LNSLAYLLFRDMINSNQDVNQ---FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
L L+ I + Q F+ SV+K S + L G++VH VK G + +
Sbjct: 79 LFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHV 138
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
TSL+ MY + G + D +F + RD+VSW+ ++ +NGR +E + + M+
Sbjct: 139 IGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEG 198
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ P+ +T L V AC G + A ++ ++ E + L + ++ + GQ
Sbjct: 199 VGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRN--SLIVMYGQCSYLRG 256
Query: 578 AEQLIAEMPFKPDKTIWASMLKAC 601
A+ + + P W SM+ +C
Sbjct: 257 AKGMFESVS-DPSTACWTSMISSC 279
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 1 MDLRRI--VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH 58
MD+ + + A++ C + +GK +H +++ G+ +D++ L+ MYA L A
Sbjct: 502 MDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQ 561
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+F+ M K++VSW+ M+ AY + + A L+ M+E ++PN + +L AC +
Sbjct: 562 GVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVE-SHIKPNEVTFMNILSACRHA 620
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
G ++ G+ + + + +++D+ + G +
Sbjct: 621 GSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGDI 658
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 351/653 (53%), Gaps = 32/653 (4%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK LHC I+K G S D+F N LL+ Y SL DA KLFDEM + N +S+ T+ Y+
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL---IHERITREKLEY 138
+ + + A+ + + G E N F+++ +LK L +DL L +H + +
Sbjct: 114 DHQFHQALHFILRIFKEGH-EVNPFVFTTLLK---LLVSMDLAHLCWTLHACVYKLGHHA 169
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYS-NWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
D + L+D Y G++ R +FD S G VA + + + F R
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 196 --GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
G++ + T++ + L GL FN + + GC++ F AL
Sbjct: 230 IMGYKPNNFTISGALKSCL-------GLEAFNVGKSVHGCA----LKGCYDHDLFVGIAL 278
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+++Y+ + +A++LF++ ++ W+ MI+ Y +++++EA+ L + +
Sbjct: 279 LELYAKSGEIIDAQRLFEEMPK------TDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ +++TF S L+AC + ++ + Q+H ++ G + V + ++D+YA+ G ++
Sbjct: 333 SVVPNNFTFASVLQACASSVSLD--LGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
++++LF LP ++ V W+ +I+G + G A LF M+ + + SSVL+ +
Sbjct: 391 NSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASA 450
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
LA+L G Q+H+ +K + K+ + SLIDMY KCG I+D F M +RD VSW
Sbjct: 451 SLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNA 510
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G +G + EA+ F M + KPN++TF+GVLSAC +AGL+ + F SM +Y
Sbjct: 511 MICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDY 570
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
++P +EHY CMV LLG+ G FD+A +LI E+ ++P +W ++L AC H L +
Sbjct: 571 DIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVC 630
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIE 665
A+ +L P D + +V+LSN+YAT G WD+++ VRK KK K+ G+SW+E
Sbjct: 631 AQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVE 683
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL+ C + GKS+H +K D+F G LL +YA + DA +LF+EM
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ +++ W+ M+ Y + R A+ L+ M + SV PN F +++VL+AC+ S LDLG+
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQ-TSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALW 178
IH + + L + + N ++D+Y KCG + + KLF++ + W G V L
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418
Query: 179 N---------------------------------SMLSGGKQVHAFCVKRGFEKEDVTLT 205
+ + L G Q+H+ +K + K+ V
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG I+D F+ M +RD VSW +I G
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICG 514
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/700 (31%), Positives = 349/700 (49%), Gaps = 85/700 (12%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
++ + LH + IKYG ++F N L+++Y L A KLFDEM+ +N+V+W +++ Y
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHERITREKLE 137
T N +P+ A + M+ G + PN + + + L+AC SG LG IH I++ +
Sbjct: 176 TQNGKPDEACARFRDMVRAGFI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234
Query: 138 YDTVLMNTLLDMYVKC---GSLTRKLFDQYSNWAASAYGNVALWNSMLS----------- 183
D V+ N L+ MY C + R +FD N WNS++S
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFD------GIGIRNSISWNSIISVYSRRGDAVSA 288
Query: 184 ---------------------------------GGKQVHAFCVKRGFEKEDVTL-TSLID 209
G++VHA ++ G V + L++
Sbjct: 289 YDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY K G I D ++F M E+D VSW +I G + C +A +M+S ++ E
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA--EMFS---LMPE---- 399
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCIDSYTFTSALKA 328
+DQ S WNS+I +E + +A+ + G + TF + L A
Sbjct: 400 YDQVS------------WNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA 447
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDV 387
++ L+ + + Q+H L++ D +G+ L+ Y + G + ++F R+ + +D
Sbjct: 448 -VSSLSLH-EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 505
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+W+ +I G + L A L M+ Q ++ F +++L C+ +A+L RG +VHA
Sbjct: 506 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHAC 565
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
++ E + + ++L+DMY KCG ID F+ MP R+V SW +I G ++G ++A
Sbjct: 566 GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 625
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F M+ P+ +TF+GVLSAC H G VEE + F SM Y L P +EH+ CMVD
Sbjct: 626 LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVD 685
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKLVSIIAEQLLATSPEDP 625
LLG+AG D+ I MP KP+ IW ++L AC N NT+L AE LL P++
Sbjct: 686 LLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNA 745
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
YV+L+N+YA+ W+ ++K R A K+ KK AG SW+
Sbjct: 746 VNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWV 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 35/298 (11%)
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
S A ++H + G+ + + + LI++Y R+G++ SA +LF + +++V W+ LI G
Sbjct: 115 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--SCLASLRRGKQVHAFCVKRGFE 454
T++G A FRDM+ + N + S L+ C S + + G Q+H K +
Sbjct: 175 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234
Query: 455 KEDITLTSLIDMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + LI MY C +D ++F + R+ +SW II + G A A F
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 294
Query: 514 MIQSRL----KPNE-ITFLGVLSACRHAGLVEEAWTIFTSMKP----------------- 551
M + L KPN+ + VL R G A I T +
Sbjct: 295 MQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSG 354
Query: 552 ---------EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E +E + ++ L Q C +DA ++ + MP + D+ W S++ A
Sbjct: 355 AIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMP-EYDQVSWNSVIGA 411
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++++G +H I+ L D+ G+ L+ MY+ ++ A + F+ M +N+
Sbjct: 547 LSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 606
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
SW +M++ Y + A++L+ M+ G P+ + VL ACS G ++ G
Sbjct: 607 YSWNSMISGYARHGHGEKALKLFTRMMLDGQ-PPDHVTFVGVLSACSHVGFVEEG 660
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 219/671 (32%), Positives = 357/671 (53%), Gaps = 43/671 (6%)
Query: 10 LRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR C G R + G+ +H RIIK G+ D +LL MY +L+DA K+FD M ++
Sbjct: 665 LRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 724
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W+T+V++ N A+R++ M++ G VEP+ +V++ C+ G L + R +H
Sbjct: 725 LVAWSTLVSSCLENCEVLKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVH 783
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ITR+ ++D L N+LL MY KCG L + K+F++ A N W +M+S
Sbjct: 784 GQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKI------AKKNAVSWTAMISSYN 837
Query: 185 -----GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
K + +F +K G E VTL S++ G I +G ++ F R++
Sbjct: 838 RGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRREL----- 892
Query: 238 IIVGCFECSCFTLS-ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + +LS ALV++Y+ C L + + N+ LWNS IS Y
Sbjct: 893 ------DPNYESLSPALVELYAECGRLGDCETILHVVGDR------NIVLWNSHISLYAH 940
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
EA+ L + + + DS+T S + AC N R Q+HG ++ + D
Sbjct: 941 RGMVIEALCLFRQMVTWRIKPDSFTLASIISACEN--TGLVRLGKQIHGHVIRTDVS-DE 997
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V +++ID+Y++ G V A +F ++ + +V W+ ++ G +++G + A LF M +S
Sbjct: 998 FVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHS 1057
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
++N+ +V++ CS + SL +G+ VH + G K+ T T+LIDMY KCG+++
Sbjct: 1058 CLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTA 1116
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F+ M R +VSW+ +I G +GR AI+ F +M++S KPNE+ F+ VLSAC H+
Sbjct: 1117 ETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 1176
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G VEE F MK +G+ P+ EH+ C +DLL ++G +A + I EMPF D ++W S
Sbjct: 1177 GSVEEGKYYFNLMK-LFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 1235
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
++ C H ++ I + +D Y +LSN+YA G W+ ++R A K L
Sbjct: 1236 LVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNL 1295
Query: 657 KK-AGMSWIEV 666
KK G S IE+
Sbjct: 1296 KKVPGYSAIEI 1306
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 235/509 (46%), Gaps = 39/509 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ + C + ++ +S+H +I + D N+LL+MY+ L + K+F
Sbjct: 759 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIF 818
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+++A+KN VSWT M+++Y + A+R ++ ML+ G +EPN ++L +C L+G +
Sbjct: 819 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSG-IEPNLVTLYSILSSCGLNGLI 877
Query: 122 DLGRLIHERITREKLE--YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
G+ +H R +L+ Y++ L L+++Y +CG +L D + N+ LWN
Sbjct: 878 REGKSVHGFAIRRELDPNYES-LSPALVELYAECG----RLGDCETILHVVGDRNIVLWN 932
Query: 180 SMLS----GGKQVHAFCVKRG-----FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
S +S G + A C+ R + + TL S+I G + G + +
Sbjct: 933 SHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRT 992
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
DV F ++++DMYS + A +FDQ + ++ WNSM
Sbjct: 993 DVSDE------------FVQNSVIDMYSKSGFVNLACTVFDQIK------HRSIVTWNSM 1034
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+ G+ N + EAI L +++ S + I+ TF + ++AC ++ + VH ++
Sbjct: 1035 LCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEK--GRWVHHKLIVC 1092
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G + D + LID+YA+ G++ +A +F + + +V+WS +I HG A F
Sbjct: 1093 GIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTF 1151
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M+ S N+ + +VL C S+ GK G ID+ +
Sbjct: 1152 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFIDLLSRS 1211
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G++ + K MP D W ++ GC
Sbjct: 1212 GDLKEAYRTIKEMPFLADASVWGSLVNGC 1240
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 145/588 (24%), Positives = 250/588 (42%), Gaps = 96/588 (16%)
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
+L+ H+L G + + + ++++ + G D RL+ E D+ + L+
Sbjct: 577 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP----DSFMYGVLIKC 632
Query: 150 YVKCG------SLTRKLFDQYSNWAASAYGNV----ALWNSMLSGGKQVHAFCVKRGFEK 199
V C L +L + + + + +V A LS G++VH +K G +
Sbjct: 633 NVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDD 692
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT----------------------- 236
+ V TSL+ MY + G + D +F+ MP RD+V+W+
Sbjct: 693 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMV 752
Query: 237 ------------GIIVGCFECSCFTLS--------------------ALVDMYSNCNVLC 264
++ GC E C ++ +L+ MYS C L
Sbjct: 753 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLL 812
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ K+F++ A N W +MIS Y E +E+A+ S + SG+ + T S
Sbjct: 813 SSEKIFEKI------AKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYS 866
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDY-IVGSNLIDLYARLGNVKSALELFHRLP 383
L +C LN R VHG + + +Y + L++LYA G + + H +
Sbjct: 867 ILSSC--GLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVG 924
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+++V W+ I G+ A LFR M+ + F ++S++ C +R GKQ
Sbjct: 925 DRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQ 984
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H ++ E + S+IDMY K G ++ +F + R +V+W ++ G QNG
Sbjct: 985 IHGHVIRTDVSDEFVQ-NSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGN 1043
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WT----IFTSMKPEYGLEPH 558
+ EAI F M S L+ N++TFL V+ AC G +E+ W I +K
Sbjct: 1044 SLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIK-------D 1096
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASMLKACETH 604
L ++D+ + G + AE + M +++I W+SM+ A H
Sbjct: 1097 LFTDTALIDMYAKCGDLNTAETVFRAM---SNRSIVSWSSMINAYGMH 1141
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 44/409 (10%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G ++ L++ Y+ +R +F+ + Y + ++ +I V
Sbjct: 583 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF------PYPDSFMYGVLIKCNVWC 636
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ AI L + S I + F S L+AC S +VHG I+ SG + D +
Sbjct: 637 HLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLS-VGRKVHGRIIKSGVDDDAV 695
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+ ++L+ +Y + GN+ A ++F +P +D+VAWS L+ C ++ A +F+ M++
Sbjct: 696 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDG 755
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + + SV++ C+ L LR + VH ++ F+ ++ SL+ MY KCG++
Sbjct: 756 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSE 815
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F+ + +++ VSWT +I + +++A+ F EM++S ++PN +T +LS+C G
Sbjct: 816 KIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNG 875
Query: 538 LVEE-----AWTIFTSMKPEY-GLEPHLEHYYC-------------------------MV 566
L+ E + I + P Y L P L Y +
Sbjct: 876 LIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHI 935
Query: 567 DLLGQAGCFDDAEQLIAEM---PFKPDKTIWASMLKACETHNNTKLVSI 612
L G +A L +M KPD AS++ ACE NT LV +
Sbjct: 936 SLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACE---NTGLVRL 981
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 353/670 (52%), Gaps = 51/670 (7%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
++ +G+ +H + +GL ++F G++L+++YA +DA +FD KNIV W M+
Sbjct: 349 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 408
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T + N+ P AIR++ +M+ Y +++ + F + ++L AC+ LG+ +H + +
Sbjct: 409 TGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 467
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFC 192
+ + N LDMY K G++ D + ++ Y + WN++ G Q A C
Sbjct: 468 DISLFVANATLDMYSKYGAIG----DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 523
Query: 193 -VKR----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--- 244
+KR G +DV+ ++ I+ C I + TG + C
Sbjct: 524 MLKRMRLHGITPDDVSFSTAIN---ACSNIR--------------ATETGKQIHCLAIKY 566
Query: 245 --CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
CS + S+L+D+YS + +RK+F Q + ++ N++I+G+V N +
Sbjct: 567 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA------SSIVPINALIAGFVQNNNED 620
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVG 359
EAI L + G+ S TF+S L C LN S QVH + SG Y+ D ++G
Sbjct: 621 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN--SAIGKQVHCYTLKSGVLYD-DTLLG 677
Query: 360 SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+L +Y + ++ A +L +P K++ W+ +I G ++G + + F M + N
Sbjct: 678 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 737
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ +SVLK CS + + GK++H K GF + ++LIDMY KCG++
Sbjct: 738 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 797
Query: 479 LFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
FK + ++D++ W +IVG +NG A EA+ FQ+M + ++KP+E+TFLGVL AC H+G
Sbjct: 798 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 857
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L+ E F SM+ YGL P L+HY C +DLLG+ G +A++ I ++PF+PD +WA+
Sbjct: 858 LISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 917
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC H + + I A +L+ P+ S YV+LS+++A G W R++ ++ G
Sbjct: 918 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 977
Query: 658 K-AGMSWIEV 666
K G SWI V
Sbjct: 978 KFPGCSWITV 987
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 160/657 (24%), Positives = 282/657 (42%), Gaps = 84/657 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +HC ++K G S +F L+ MYA + +A ++FD +A +
Sbjct: 175 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDT 234
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W++M+ Y A+ L++ M + GS P+ ++ + SG LD + +
Sbjct: 235 ICWSSMIACYHRVGCYQEALALFSRMDKMGSA-PDQVTLVTIISTLASSGRLDHATALLK 293
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ TV N ++ + + G L+ +W + + + SMLS
Sbjct: 294 KMPTPS----TVAWNAVISGHAQSGLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAAN 347
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+Q+HA V G + +SLI++Y KCG D +F+ E+++V W +
Sbjct: 348 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 407
Query: 239 IVG-----------------------------------CFECSCFTL------------- 250
+ G C S F L
Sbjct: 408 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 467
Query: 251 -------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+A +DMYS + +A+ LF Y + WN++ G N + EEA
Sbjct: 468 DISLFVANATLDMYSKYGAIGDAKALFSLIP------YKDSISWNALTVGLAQNLEEEEA 521
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ +L + G+ D +F++A+ AC N+ + Q+H L + G ++ VGS+LI
Sbjct: 522 VCMLKRMRLHGITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLI 579
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
DLY++ G+V+S+ ++F ++ +V + LI G ++ A LF+ ++ +
Sbjct: 580 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 639
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKF 482
SS+L CS + GKQVH + +K G +D L SL +YLK ++D L
Sbjct: 640 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 699
Query: 483 MPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
MP+ +++ WT II G QNG ++ F M ++ +E TF VL AC +
Sbjct: 700 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 759
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + G + ++D+ + G + + E+ K D W SM+
Sbjct: 760 GKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/577 (23%), Positives = 243/577 (42%), Gaps = 68/577 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + ++LH RI++ G G++L+ +Y + A + + ++++
Sbjct: 80 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ + + P + + ++ P+ F + VL ACS G L GR +H + +
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 199
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF--- 191
L+DMY KCG + R++FD A + W+SM++ +V +
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPNARRVFD------GIACPDTICWSSMIACYHRVGCYQEA 253
Query: 192 ------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
K G + VTL ++I G +D AL MP V+W +I G +
Sbjct: 254 LALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 313
Query: 246 SC--------------------FTLSALVDMYSNCNVLCEARKLF--------------- 270
T ++++ +N E +++
Sbjct: 314 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 373
Query: 271 --------------DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
D + + S N+ +WN+M++G+V NE EEAI + ++ +
Sbjct: 374 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 433
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D +TF S L AC L +F QVH + + + ++ V + +D+Y++ G + A
Sbjct: 434 TDEFTFVSILGACTYLSSF--YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 491
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF +P KD ++W+ L +G ++ A + + M + S+ + CS +
Sbjct: 492 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 551
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ GKQ+H +K G +SLID+Y K G+++ +F + +V +I
Sbjct: 552 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 611
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
G QN EAI FQ++++ LKP+ +TF +LS C
Sbjct: 612 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 648
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 195/488 (39%), Gaps = 80/488 (16%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
R +H RI R L ++L+++Y K G + W+A Y SG
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYA-------WSALGYAG-----ERASG 133
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC---GEIDD-GLALFNFMPERDVVSWTGIIV 240
C R DV L + Y++C G D GLA+ R V G V
Sbjct: 134 AASSLLSCHARSGSPGDV-LGAF--RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQV 190
Query: 241 GC------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
C F S F +ALVDMY+ C + AR++FD A + W+SMI+ Y
Sbjct: 191 HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD------GIACPDTICWSSMIACY 244
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+EA+ L S + G D T +
Sbjct: 245 HRVGCYQEALALFSRMDKMGSAPDQVTLVT------------------------------ 274
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+I A G + A L ++P VAW+ +I G + GL L++DM
Sbjct: 275 -------IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 327
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + +S+L + + + G+Q+HA V G + +SLI++Y KCG
Sbjct: 328 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 387
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F E+++V W ++ G QN +EAI FQ M++ L+ +E TF+ +L AC
Sbjct: 388 DAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT 447
Query: 535 -----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
+ G TI M + L +D+ + G DA+ L + +P+K
Sbjct: 448 YLSSFYLGKQVHCVTIKNCM------DISLFVANATLDMYSKYGAIGDAKALFSLIPYK- 500
Query: 590 DKTIWASM 597
D W ++
Sbjct: 501 DSISWNAL 508
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 195/498 (39%), Gaps = 115/498 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C S GK +HC IK + +F N L MY+ + ++ DA LF +
Sbjct: 439 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 498
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +SW + N A+ + M +G + P+ +S + ACS + G+
Sbjct: 499 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGK 557
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------------- 164
IH + + + + ++L+D+Y K G + +RK+F Q
Sbjct: 558 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 617
Query: 165 -SNWAASAYGNV---------ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL- 204
+ A + V ++S+LSG GKQVH + +K G +D L
Sbjct: 618 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 677
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVG---------------------- 241
SL +YLK ++D L MP+ +++ WT II G
Sbjct: 678 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 737
Query: 242 -------------CFECSCF--------------------TLSALVDMYSNCNVLCEARK 268
C + + F SAL+DMYS C + + +
Sbjct: 738 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 797
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F + + ++ WNSMI G+ N +EA+ L + + D TF L A
Sbjct: 798 AFKELKNKQ-----DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIA 852
Query: 329 CIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
C + L++ F +V+GL LD+ + IDL R G+++ A E +LP
Sbjct: 853 CTHSGLISEGRHFFGSMRKVYGLTP----RLDHY--ACFIDLLGRGGHLQEAQEAIDQLP 906
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W+ + C H
Sbjct: 907 FRPDGVVWATYLAACRMH 924
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 9/269 (3%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+S+ +HG I+ G L +G +L++LY + G V A ++ A S L+
Sbjct: 81 HSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLS 140
Query: 396 GCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+ G FR + + +QF ++ VL CS + L G+QVH VK GF
Sbjct: 141 CHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 200
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+DMY KCG++ + +F + D + W+ +I + G +EA+A F M
Sbjct: 201 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 260
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ P+++T + ++S +G ++ A + M P + ++ Q+G
Sbjct: 261 DKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGL 315
Query: 575 FDDAEQLIAEM---PFKPDKTIWASMLKA 600
+ L +M P ++ +ASML A
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSA 344
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ C + GK +H I K G + L+ MY+ + + + F
Sbjct: 740 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 799
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
E+ K +I+ W +M+ + N + A+ L+ M E ++P+ + VL AC+ SG
Sbjct: 800 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGL 858
Query: 121 LDLGR 125
+ GR
Sbjct: 859 ISEGR 863
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 347/688 (50%), Gaps = 61/688 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIK-------YGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L C Q +S+ +GK +H ++K L+ L+ +Y + L A +FD
Sbjct: 16 LESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFD 75
Query: 63 EMAR--KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
+M KN+V W ++ AY N AI LY ML YG + PN F + VLKACS +
Sbjct: 76 KMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYG-ITPNRFTFPFVLKACSALKE 134
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
GR IH I R +LE + + L+D Y KCG L +++FD+ +V W
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKR------DVVAW 188
Query: 179 NSMLSGGKQVHAFCVKRGFEKE----------DV-----TLTSLIDMYLKCGEIDDGLAL 223
NSM+SG F + G E DV T+ ++ + + G +
Sbjct: 189 NSMISG------FSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEI 242
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F R V ++VG + ++D+Y C + AR++FD N
Sbjct: 243 HGFCVRRGFVG--DVVVG---------TGILDVYGKCQCIDYARRIFDM-----MGIVKN 286
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHI---HSSGMCIDSYTFTSALKACINLLNFNSRFA 340
W++M+ YV+ + EA+ L + + + + T + ++ C NL + ++
Sbjct: 287 EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTC 346
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
L H + SG+ LD +VG+ L+ +YA+ G + A+ F+ + +D V+++ +I G ++
Sbjct: 347 L--HCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN 404
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G + +F +M S + + ++SVL C+ LA L G H + + GF + +
Sbjct: 405 GNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMIC 464
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+LIDMY KCG+ID +F M +R +VSW +I+ G +G EA+ F M LK
Sbjct: 465 NALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLK 524
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+++TF+ ++SAC H+GLV E F +M ++G+ P +EHY CMVDLL +AG F +
Sbjct: 525 PDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHS 584
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
I +MP +PD +W ++L AC + N +L +++++ PE +V+LSN+Y+ +G
Sbjct: 585 FIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGR 644
Query: 641 WDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
WD ++VR K+ G EK G SWIE+S
Sbjct: 645 WDDAAQVRFTQKEQGFEKSPGCSWIEIS 672
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 18/235 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ +R C + G LHC IK G D+ GN LLSMYA +N A + F+EM
Sbjct: 328 LATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMD 387
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ VS+T +++ Y N +R++ M + + P ++VL AC+ L G
Sbjct: 388 LRDAVSFTAIISGYVQNGNSEEGLRMFLEM-QLSGINPEKATLASVLPACAHLAGLHYGS 446
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
H DT++ N L+DMY KCG + RK+FD+ + WN+M+
Sbjct: 447 CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRG------IVSWNTMII 500
Query: 184 G----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G + A + G + +DVT LI G + +G FN M +
Sbjct: 501 AYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQ 555
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 166/442 (37%), Gaps = 109/442 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L Q S++ GK +H ++ G D+ G +L +Y ++ A ++FD M
Sbjct: 223 IVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMG 282
Query: 66 -RKNIVSWTTMVTAYTSNKRPNWAIRLYNH--MLEYGSVEPNGFMYSAVLKACSLSGDLD 122
KN V+W+ MV AY A+ L+ ML+ + + + V++ C+ DL
Sbjct: 283 IVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLS 342
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV 175
G +H + D ++ NTLL MY KCG + + F++ ++ A G V
Sbjct: 343 TGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYV 402
Query: 176 ALWNS----------MLSG-----------------------GKQVHAFCVKRGFEKEDV 202
NS LSG G H + + GF + +
Sbjct: 403 QNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTM 462
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+LIDMY KCG+ID +F+ M +R +VSW +I+
Sbjct: 463 ICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMII---------------------- 500
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
AYG I G L EA+ L ++ S G+ D TF
Sbjct: 501 -----------------AYG--------IHGIGL-----EALLLFDNMQSEGLKPDDVTF 530
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSAL 376
+ AC S L G + D+ + ++DL +R G K
Sbjct: 531 ICLISAC-------SHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVH 583
Query: 377 ELFHRLP-KKDVVAWSGLIMGC 397
++P + DV W L+ C
Sbjct: 584 SFIEKMPLEPDVRVWGALLSAC 605
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/669 (30%), Positives = 335/669 (50%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S++ G+ LH ++K G S D + N L+S+Y SL A +F M++++
Sbjct: 278 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDA 337
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T++ + A+ L+ M + +EP+ ++++ ACS G L G+ +H
Sbjct: 338 VTYNTLINGLSQCGYGEKAMELFKRM-QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
T+ + + LL++Y KC + L + + + NV LWN ML +
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETAL----NYFLETEVENVVLWNVMLVAYGLLD 452
Query: 189 ---HAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++F + R + E++ T S++ ++ G+++ G + + II
Sbjct: 453 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-----------SQIIK 501
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A + ++ A +V W +MI+GY +
Sbjct: 502 TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF------AGKDVVSWTTMIAGYTQYNFD 555
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
++A+T + G+ D T+A+ AC L Q+H SG+ D +
Sbjct: 556 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE--GQQIHAQACVSGFSSDLPFQN 613
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LY++ GN++ A F + D +AW+ L+ G + G N A +F M D
Sbjct: 614 ALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDS 673
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F S +K S A++++GKQVHA K G++ E ++I MY KCG I D F
Sbjct: 674 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQF 733
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ ++ VSW +I ++G EA+ F +MI S ++PN +T +GVLSAC H GLV+
Sbjct: 734 LELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 793
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F SM EYGL P EHY C+VD+L +AG A+ I EMP +PD +W ++L A
Sbjct: 794 KGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A LL PED + YV+LSN+YA WD+ R+ K+ G KK
Sbjct: 854 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEP 913
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 914 GQSWIEVKN 922
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/677 (24%), Positives = 291/677 (42%), Gaps = 95/677 (14%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ +G+ LH +I+K G + LL Y L+ A K+FDEM + I +W M+
Sbjct: 83 SLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIK 142
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
S L+ M+ +V PN +S VL+AC S D+ IH RI + L
Sbjct: 143 ELASRSLSGKVFCLFGRMVNE-NVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL 201
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAASAYG---------------- 173
T++ N L+D+Y + G + R++FD +S+W A G
Sbjct: 202 GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCD 261
Query: 174 --------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++S+LS G+Q+H +K GF + +L+ +Y G
Sbjct: 262 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGS 321
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC--------------------SCFTLSALVDM 256
+ +F+ M +RD V++ +I G +C TL++LV
Sbjct: 322 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVA 381
Query: 257 YSNCNVLCEARKLF-----------DQYSSWAASAYG------------------NVALW 287
S+ L ++L D+ + Y NV LW
Sbjct: 382 CSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLW 441
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N M+ Y L + + + + + + YT+ S LK CI L + Q+H I
Sbjct: 442 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGEQIHSQI 499
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + ++L+ V S LID+YA+LG + +A ++ R KDVV+W+ +I G T++ + A
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
FR M++ ++ +++ + C+ L +L+ G+Q+HA GF + +L+ +Y
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 619
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG I++ F+ D ++W ++ G Q+G +EA+ F M + + N TF
Sbjct: 620 SKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFG 679
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+ A +++ + + + G + E ++ + + G DA++ E+
Sbjct: 680 SAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738
Query: 588 KPDKTIWASMLKACETH 604
K ++ W +M+ A H
Sbjct: 739 K-NEVSWNAMINAYSKH 754
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 208/518 (40%), Gaps = 101/518 (19%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N L G+++H+ +K GF+ L+D YL G++D L +F+ MP
Sbjct: 81 NGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMP---------- 130
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
E + FT WN MI
Sbjct: 131 -----ERTIFT-------------------------------------WNKMIKELASRS 148
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-LLNFNSRFALQVHGLIVTSGYELDYI 357
+ + L + + + + TF+ L+AC + F+ Q+H I+ G I
Sbjct: 149 LSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFD--VVEQIHARIIYQGLGKSTI 206
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + LIDLY+R G V A +F L KD +W +I G +K+ A LF DM
Sbjct: 207 VCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLG 266
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ SSVL C + SL G+Q+H +K GF + +L+ +Y G +
Sbjct: 267 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAE 326
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M +RD V++ +I G Q G ++A+ F+ M L+P+ T ++ AC G
Sbjct: 327 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386
Query: 538 -----------------------------LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
L + I T++ Y LE +E+ +
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN--YFLETEVENVVLWNVM 444
Query: 569 LGQAGCFDDAE---QLIAEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
L G DD ++ +M + P++ + S+LK C + +L I Q++ TS
Sbjct: 445 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF 504
Query: 623 EDPSKYV--MLSNVYATLG----MWDSLSKVRKAGKKL 654
+ + YV +L ++YA LG WD L +R AGK +
Sbjct: 505 Q-LNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDV 539
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A+ C +++K+G+ +H + G S D+ N L+++Y+ ++ +A+ F++
Sbjct: 577 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ ++W +V+ + + A+R++ M G ++ N F + + +KA S + ++ G+
Sbjct: 637 AGDNIAWNALVSGFQQSGNNEEALRVFARMNREG-IDSNNFTFGSAVKAASETANMKQGK 695
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-- 183
+H IT+ + +T + N ++ MY KCGS++ D + + N WN+M++
Sbjct: 696 QVHAVITKTGYDSETEVCNAIISMYAKCGSIS----DAKKQFLELSMKNEVSWNAMINAY 751
Query: 184 -----GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G + + +F + VTL ++ G +D G+ F M
Sbjct: 752 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESM 802
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A++ + ++KQGK +H I K G + N ++SMYA S++DA K F E++ KN
Sbjct: 681 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKN 740
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW M+ AY+ + + A+ ++ M+ + +V PN VL ACS G +D G
Sbjct: 741 EVSWNAMINAYSKHGFGSEALDSFDQMI-HSNVRPNHVTLVGVLSACSHIGLVDKGIEYF 799
Query: 129 ERITRE-KLEYDTVLMNTLLDMYVKCGSLTR 158
E + E L ++DM + G L+R
Sbjct: 800 ESMNTEYGLAPKPEHYVCVVDMLTRAGLLSR 830
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/695 (30%), Positives = 335/695 (48%), Gaps = 102/695 (14%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ +G+ +H ++K G+ D+ N+LL+MY + DA ++F++M ++VSW TM++
Sbjct: 125 VYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISG 184
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+ + ++ + M+ + PN + + +CS L GR IH + + L+
Sbjct: 185 FQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDV 244
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------ 184
+ L+++L++MY+KCGS+ +F+ + S N +WN M+SG
Sbjct: 245 EEYLVSSLIEMYMKCGSIKNAENIFNSILD-KDSVRRNAVIWNVMISGYVSNGCFSQALL 303
Query: 185 --------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
GKQ+H K G + T+L+DMYL
Sbjct: 304 LFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYL 363
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG++ GL +F +++ W+ +I C + C T +A +LF +
Sbjct: 364 KCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPT---------------KALELFYE 408
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ + E+ + DS + L+AC +L
Sbjct: 409 F-------------------------KMEDGLA------------DSGILVAVLRACSSL 431
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+Q+HGL G+ D VGS L+DLYA+ ++ + ++F RL +KD+V+W+
Sbjct: 432 TLKPE--GMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNA 489
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
LI G + A FRDM N I+ +L VC+ L+ + K+VH + +++G
Sbjct: 490 LISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQG 549
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ SLI Y KCG+I+ L F+ MPER+ VSW II+G G + R E I F
Sbjct: 550 LGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFD 609
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M+ S +KP+ +TF +LSAC HAG V+E F SM ++ L+P LE Y CMVDLLG+A
Sbjct: 610 KMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRA 669
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G + A LI MP PD IW S+L +C+ H + L I+A + P V+L+
Sbjct: 670 GHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLA 729
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
N+Y LG SKVR K +G +KK G SWIEV
Sbjct: 730 NLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEV 764
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/513 (21%), Positives = 203/513 (39%), Gaps = 127/513 (24%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-- 64
V ++ C +S+ G+ +H ++K GL + + ++L+ MY S+ +A +F+ +
Sbjct: 215 VSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILD 274
Query: 65 ---ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
R+N V W M++ Y SN + A+ L+ M+ +G ++P+ ++ CS S D+
Sbjct: 275 KDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWG-IKPDYSTMVSLFSLCSESLDI 333
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
G+ IH I + L+ + + LLDMY+KCG + K+F + N N+ +W+
Sbjct: 334 AFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQN------HNLIMWS 387
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+++S G Q+H K
Sbjct: 388 AVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKM 447
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------- 241
GF + ++L+D+Y KC ++ +F + ++D+VSW +I G
Sbjct: 448 GFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAF 507
Query: 242 ---------------------CFECSCFTL--------------------SALVDMYSNC 260
C S TL ++L+ Y+ C
Sbjct: 508 RDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKC 567
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ + F++ ++ ++ L G ++ + +E I L + +SG+ D
Sbjct: 568 GDINSSLYTFEKMPERNDVSWNSIIL------GMGMHSRTDEMIVLFDKMVASGIKPDHV 621
Query: 321 TFTSALKACINLLNFNS---RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
TFT+ L AC + + F V + E Y + ++DL R G++ A +
Sbjct: 622 TFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLE-QY---TCMVDLLGRAGHLNQAYD 677
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLL 409
L +P D W L+ C HG LA ++
Sbjct: 678 LIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIV 710
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V LR C +G +H K G D+F G+ L+ +YA + + K+F ++
Sbjct: 421 LVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS 480
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K++VSW +++ Y ++ + A++ + M + + PN + +L C+ + L +
Sbjct: 481 QKDLVSWNALISGYAQDECADEALKAFRDM-QLEEIRPNTVTIACILSVCAHLSVMTLCK 539
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H + R+ L ++ N+L+ Y KCG + L+ + N WNS++ G
Sbjct: 540 EVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLY----TFEKMPERNDVSWNSIILGM 595
Query: 185 ------GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+ + F V G + + VT T+++ G +D+G F M E
Sbjct: 596 GMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVE 648
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 210/675 (31%), Positives = 347/675 (51%), Gaps = 46/675 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKN 68
L+ CG + G +H IKYG +F N+L+++YA +N A KLFD M R +
Sbjct: 65 LKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRND 124
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++++AY+ N A+ L++ ML+ G V N + ++A L+AC S + LG IH
Sbjct: 125 VVSWNSIISAYSGNGMCTEALCLFSEMLKAGVV-TNTYTFAAALQACEDSSFIKLGMQIH 183
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN-----VALWNSMLS 183
I + D + N L+ MYV+ G + AA +GN + WNSML+
Sbjct: 184 AAILKSGRVLDVYVANALVAMYVRFGKMPE---------AAVIFGNLEGKDIVTWNSMLT 234
Query: 184 GGKQVHAFCVKRGF---------EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G Q + F + + V++ S+I + G + +G + + + S
Sbjct: 235 GFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
I+VG + L+DMY+ C + + FD A+ ++ W + +GY
Sbjct: 295 --NILVG---------NTLIDMYAKCCCMSYGGRAFD------LMAHKDLISWTTAAAGY 337
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N+ +A+ LL + GM +D+ S L AC L N + ++HG + G
Sbjct: 338 AQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGL-NCLGKIK-EIHGYTIRGGLS- 394
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++ + +ID+Y G + A+ +F + KDVV+W+ +I +GL + A +F M
Sbjct: 395 DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK 454
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + + + S+L L++L++GK++H F +++GF E +L+DMY +CG ++
Sbjct: 455 ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVE 514
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F R+++ WT +I G +G + A+ F M ++ P+ ITFL +L AC
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H+GLV E + MK EY LEP EHY C+VDLLG+ C ++A Q++ M +P +W
Sbjct: 575 HSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVW 634
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H+N ++ + AE+LL ++P YV++SNV+A G W + +VR K
Sbjct: 635 CALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGS 694
Query: 655 G-EKKAGMSWIEVSS 668
G K G SWIEV +
Sbjct: 695 GLTKNPGCSWIEVGN 709
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 151/283 (53%), Gaps = 9/283 (3%)
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MY C + +A +FD+ S + + WN+M+ GYV N + A+ + + G+
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERS------IFTWNAMMGGYVSNGEALGALEMYREMRHLGV 54
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
DSYTF LKAC + + ++HGL + G + V ++L+ LYA+ ++ A
Sbjct: 55 SFDSYTFPVLLKACGIVEDLFC--GAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGA 112
Query: 376 LELFHRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
+LF R+ + DVV+W+ +I + +G+ + A LF +M+ + N + ++ L+ C
Sbjct: 113 RKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACED 172
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ ++ G Q+HA +K G + +L+ MY++ G++ + +F + +D+V+W +
Sbjct: 173 SSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSM 232
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+ G QNG EA+ +F ++ + LKP++++ + ++ A G
Sbjct: 233 LTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG 275
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 198/474 (41%), Gaps = 96/474 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C IK G +H I+K G D++ N L++MY F + +A +F + K+
Sbjct: 166 ALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKD 225
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
IV+W +M+T + N + A+ + + L+ ++P+ +++ A G L G+ IH
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFF-YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIH 284
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WAASAYG-------- 173
+ + + ++ NTL+DMY KC ++ + FD ++ W +A G
Sbjct: 285 AYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL 344
Query: 174 ----------------NVALWNSMLSGG---------KQVHAFCVKRGFEKEDVTLTSLI 208
+ + S+L K++H + ++ G + V ++I
Sbjct: 345 QALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTII 403
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
D+Y +CG ID + +F + +DVVSWT +I SC
Sbjct: 404 DVYGECGIIDYAVRIFESIECKDVVSWTSMI------SC--------------------- 436
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
YV N +A+ + S + +G+ D T S L A
Sbjct: 437 -------------------------YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA 471
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+L ++HG I+ G+ L+ + + L+D+YAR G+V+ A ++F ++++
Sbjct: 472 VCSLSTLKK--GKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLI 529
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
W+ +I HG A LF M + + ++L CS + GK
Sbjct: 530 LWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK 583
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I+ + G+ + GK +H IK G +I GN L+ MYA ++ + F
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D MA K+++SWTT Y NK A+ L L+ ++ + M ++L AC L
Sbjct: 320 DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQ-LQMEGMDVDATMIGSILLACRGLNCL 378
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY 172
+ IH R L D VL NT++D+Y +CG + ++F+ +W + S Y
Sbjct: 379 GKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCY 437
Query: 173 GNVALWN-------------------------------SMLSGGKQVHAFCVKRGFEKED 201
+ L N S L GK++H F +++GF E
Sbjct: 438 VHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEG 497
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+L+DMY +CG ++D +F R+++ WT +I
Sbjct: 498 SISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMI 535
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + G+V A +F ++ ++ + W+ ++ G +G A ++R+M + + +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+LK C + L G ++H +K G + + SL+ +Y KC +I+ LF M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 485 ER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
R DVVSW II NG EA+ F EM+++ + N TF L AC + ++
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 544 TIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + +K L+ ++ + +V + + G +A + + K D W SML
Sbjct: 181 QIHAAILKSGRVLDVYVAN--ALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSML 233
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/675 (31%), Positives = 345/675 (51%), Gaps = 34/675 (5%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++V L+ C + QG+ H +++ G+ + G LL MY + DA +F ++
Sbjct: 48 QLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
W M+ +T + ++A+ Y ML G++ P+ + + V+KAC + LG
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALG 166
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R++H++I E D + ++L+ Y + G + R LFD+ + + LWN ML
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS------KDGVLWNVML 220
Query: 183 SG-------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-RDVVS 234
+G F R E ++T + + EI + NF + +V
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI-----MINFGSQLHGLVV 275
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+G+ + + F AL+D+Y C + ARK+FDQ + ++ + +MISGY
Sbjct: 276 SSGLEMDSPVANTF---ALIDIYFKCRDVEMARKIFDQRTPV------DIVVCTAMISGY 326
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
VLN N A+ + + M +S T S L AC L ++HG I+ +G+
Sbjct: 327 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT--LGKELHGHILKNGHGG 384
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
VGS ++D+YA+ G + A + F + KD V W+ +I C+++G A LFR M
Sbjct: 385 SCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMG 444
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + IS+ L C+ L +L GK++HAF ++ F + ++LIDMY KCG +D
Sbjct: 445 MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLD 504
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F M E++ VSW II G +GR K+++ F M+ ++P+ +TFL ++SAC
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAG V+E F M E G+ +EHY CMVDL G+AG ++A +I MPF PD +W
Sbjct: 565 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 624
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H N +L + + L P++ YV+LSNV+A G W+S+ K+R K+
Sbjct: 625 GTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKER 684
Query: 655 G-EKKAGMSWIEVSS 668
G +K G SWI+V++
Sbjct: 685 GVQKVPGCSWIDVNN 699
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK +H +++ D+F + L+ MY+ +L+ A ++F
Sbjct: 451 DCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 510
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KN VSW +++ AY ++ R ++ L++ ML G ++P+ + A++ AC +G +
Sbjct: 511 DTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQV 569
Query: 122 DLG 124
D G
Sbjct: 570 DEG 572
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 216/748 (28%), Positives = 363/748 (48%), Gaps = 103/748 (13%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+++K+G +H IIK GL D++ NNLL +YA + A LFDEM +++VSWTT++
Sbjct: 30 QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLL 89
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+A+T NK A++L++ ML G PN F S+ L++CS G+ + G IH + + L
Sbjct: 90 SAHTRNKHHFEALQLFDMMLGSGQC-PNEFTLSSALRSCSALGEFEFGAKIHASVVKLGL 148
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------ 184
E + VL TL+D+Y KC + + A G+V W +M+S
Sbjct: 149 ELNHVLGTTLVDLYTKCDCTV----EPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQ 204
Query: 185 ---------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMY 211
GK +H+ + G E + T++I MY
Sbjct: 205 LYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMY 264
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF--TLSALVDM-----------YS 258
KC ++D + + P+ DV WT II G + S ++ALVDM Y+
Sbjct: 265 AKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYA 324
Query: 259 ---NCNVLCEARKLFDQYSS----------------------------------WAASAY 281
N + + +L +Q+ S + A
Sbjct: 325 SLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIAL 384
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
NV W S+I+G+ + EE++ L + + ++G+ +S+T ++ L AC + +
Sbjct: 385 PNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQ--TK 442
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
++HG I+ + ++D VG+ L+D YA G A + + +D++ ++ L + G
Sbjct: 443 KLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQG 502
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
+ +A + M N +++F ++S + + L + GKQ+H + K GFE+ +
Sbjct: 503 DHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSN 562
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL+ Y KCG + D +FK + E D VSW G+I G NG +A++ F +M + +KP
Sbjct: 563 SLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKP 622
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ +TFL ++ AC L+ + F SM+ Y + P L+HY C+VDLLG+ G ++A +
Sbjct: 623 DSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGV 682
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I MPFKPD I+ ++L AC H N L +A + L P DP+ Y++L+++Y G+
Sbjct: 683 IETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLP 742
Query: 642 DSLSKVRKAGKKLGEKKAGMS-WIEVSS 668
D K RK ++ G +++ W+EV S
Sbjct: 743 DFGDKTRKLMRERGLRRSPRQCWMEVKS 770
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 244/580 (42%), Gaps = 98/580 (16%)
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-- 166
VL C+ S L G +H I + L++D L N LL +Y KC + R LFD+ +
Sbjct: 23 VLSLCN-SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRD 81
Query: 167 ---WAA--SAYGN-------VALWNSMLSGGK------------------------QVHA 190
W SA+ + L++ ML G+ ++HA
Sbjct: 82 VVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC--- 247
VK G E V T+L+D+Y KC + L F+ + DVVSWT +I E S
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201
Query: 248 -----------------FTLSALVDMYS---------------------------NCNVL 263
FT L+ M S ++
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAII 261
Query: 264 C---EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
C + R++ D + +V LW S+ISG+V N Q EA+ L + SG+ +++
Sbjct: 262 CMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNF 321
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS-ALELF 379
T+ S L A ++L+ Q H ++ G E D VG+ L+D+Y + + + ++ F
Sbjct: 322 TYASLLNASSSVLSL--ELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAF 379
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ +V++W+ LI G +HG + LF +M + N F +S++L CS + S+
Sbjct: 380 RGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSII 439
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
+ K++H + +K + + +L+D Y G D+ ++ M RD++++T +
Sbjct: 440 QTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLN 499
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPH 558
Q G + A+ M +K +E + +SA G++E + S K G E
Sbjct: 500 QQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKS--GFERC 557
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+V + G DA ++ ++ +PD+ W ++
Sbjct: 558 NSVSNSLVHSYSKCGSMRDAYRVFKDIT-EPDRVSWNGLI 596
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 5/285 (1%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQ----VHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+S++ + C+ +L+ + L+ VH I+ G + D + +NL+ LYA+ V
Sbjct: 9 NSFSPCRFRETCLQVLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVG 68
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A LF +P +DVV+W+ L+ T++ + A LF M+ S Q N+F +SS L+ CS
Sbjct: 69 QARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCS 128
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L G ++HA VK G E + T+L+D+Y KC + L F+ + DVVSWT
Sbjct: 129 ALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTT 188
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I + + EA+ + +MI++ + PNE TF+ +L GL + + S +
Sbjct: 189 MISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITF 248
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G+E +L ++ + + +DA ++ + P K D +W S++
Sbjct: 249 GVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTP-KYDVCLWTSII 292
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 217/685 (31%), Positives = 353/685 (51%), Gaps = 52/685 (7%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R++++ L C ++I +G++LH RI+K G I+ N L++YA L+ A LFD
Sbjct: 12 RQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDS 71
Query: 64 MAR--KNIVSWTTMVTAYTSNKRPN---WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+ K+ VSW +++ A++ N + +AI L+ M+ +V PN + V A S
Sbjct: 72 INDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNL 131
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
D+ G+ H + D + ++LL+MY K G + RKLFD+ N
Sbjct: 132 SDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPER------NTV 185
Query: 177 LWNSMLSG-------GKQVHAFCVKRGFE--KEDVTLTSLI-----DMYLKCGEIDDGLA 222
W +M+SG K V F + R E + + LTS++ D+++ G LA
Sbjct: 186 SWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLA 245
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ N + +VS +ALV MY+ C L +A + F+ S
Sbjct: 246 IKNGLLA--IVS--------------VANALVTMYAKCGSLDDAVRTFE------FSGDK 283
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N W++M++GY +++A+ L + +HSSG+ +T + AC +L Q
Sbjct: 284 NSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVE--GKQ 341
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H G+ L V S ++D+YA+ G++ A + F + + DVV W+ +I G ++G
Sbjct: 342 MHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGD 401
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
L+ M N+ ++SVL+ CS LA+L +GKQ+HA +K GF+ E ++
Sbjct: 402 YEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSA 461
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L MY KCG +DDG +F MP RDV+SW +I G QNG +A+ F++M+ +KP+
Sbjct: 462 LSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPD 521
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF+ +LSAC H GLV+ W F M E+ + P +EHY CMVD+L +AG ++A++ I
Sbjct: 522 PVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFI 581
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
+W +L AC+ H N +L E+L+ + S YV+LS++Y LG +
Sbjct: 582 ESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRE 641
Query: 643 SLSKVRKAGKKLG-EKKAGMSWIEV 666
++ +VR+ K G K+ G SWIE+
Sbjct: 642 NVERVRRIMKARGVNKEPGCSWIEL 666
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 352/670 (52%), Gaps = 51/670 (7%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
++ +G+ +H + +GL ++F G++L+++YA +DA +FD KNIV W M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T + N+ P AIR++ +M+ Y +++ + F + ++L AC+ LG+ +H + +
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFC 192
+ + N LDMY K G++ D + ++ Y + WN++ G Q A C
Sbjct: 458 DISLFVANATLDMYSKYGAIG----DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 193 -VKR----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--- 244
+KR G +DV+ ++ I+ C I + TG + C
Sbjct: 514 MLKRMRLHGITPDDVSFSTAIN---ACSNIR--------------ATETGKQIHCLAIKY 556
Query: 245 --CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
CS + S+L+D+YS + +RK+F Q + ++ N++I+G+V N +
Sbjct: 557 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA------SSIVPINALIAGFVQNNNED 610
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVG 359
EAI L + G+ S TF+S L C LN S QVH + SG Y+ D ++G
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN--SAIGKQVHCYTLKSGVLYD-DTLLG 667
Query: 360 SNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+L +Y + ++ A +L +P K++ W+ +I G ++G + + F M + N
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ +SVLK CS + + GK++H K GF + ++LIDMY KCG++
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 479 LFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
FK + ++D++ W +IVG +NG A EA+ FQ+M + ++KP+E+TFLGVL AC H+G
Sbjct: 788 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 847
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L+ E F M+ YGL P L+HY C +DLLG+ G +A++ I ++PF+PD +WA+
Sbjct: 848 LISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 907
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC H + + I A +L+ P+ S YV+LS+++A G W R++ ++ G
Sbjct: 908 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 967
Query: 658 K-AGMSWIEV 666
K G SWI V
Sbjct: 968 KFPGCSWITV 977
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 160/657 (24%), Positives = 282/657 (42%), Gaps = 84/657 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +HC ++K G S +F L+ MYA + +A ++FD +A +
Sbjct: 165 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDT 224
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W++M+ Y A+ L++ M + GS P+ ++ + SG LD + +
Sbjct: 225 ICWSSMIACYHRVGCYQEALALFSRMDKMGSA-PDQVTLVTIISTLASSGRLDHATALLK 283
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ TV N ++ + + G L+ +W + + + SMLS
Sbjct: 284 KMPTPS----TVAWNAVISGHAQSGLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAAN 337
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+Q+HA V G + +SLI++Y KCG D +F+ E+++V W +
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397
Query: 239 IVG-----------------------------------CFECSCFTL------------- 250
+ G C S F L
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 251 -------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+A +DMYS + +A+ LF Y + WN++ G N + EEA
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIP------YKDSISWNALTVGLAQNLEEEEA 511
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ +L + G+ D +F++A+ AC N+ + Q+H L + G ++ VGS+LI
Sbjct: 512 VCMLKRMRLHGITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLI 569
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
DLY++ G+V+S+ ++F ++ +V + LI G ++ A LF+ ++ +
Sbjct: 570 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 629
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKF 482
SS+L CS + GKQVH + +K G +D L SL +YLK ++D L
Sbjct: 630 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 689
Query: 483 MPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
MP+ +++ WT II G QNG ++ F M ++ +E TF VL AC +
Sbjct: 690 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 749
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + G + ++D+ + G + + E+ K D W SM+
Sbjct: 750 GKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/577 (23%), Positives = 243/577 (42%), Gaps = 68/577 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + ++LH RI++ G G++L+ +Y + A + + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ + + P + + ++ P+ F + VL ACS G L GR +H + +
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF--- 191
L+DMY KCG + R++FD A + W+SM++ +V +
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFD------GIACPDTICWSSMIACYHRVGCYQEA 243
Query: 192 ------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
K G + VTL ++I G +D AL MP V+W +I G +
Sbjct: 244 LALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQS 303
Query: 246 SC--------------------FTLSALVDMYSNCNVLCEARKLF--------------- 270
T ++++ +N E +++
Sbjct: 304 GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363
Query: 271 --------------DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
D + + S N+ +WN+M++G+V NE EEAI + ++ +
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D +TF S L AC L +F QVH + + + ++ V + +D+Y++ G + A
Sbjct: 424 TDEFTFVSILGACTYLSSF--YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF +P KD ++W+ L +G ++ A + + M + S+ + CS +
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ GKQ+H +K G +SLID+Y K G+++ +F + +V +I
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
G QN EAI FQ++++ LKP+ +TF +LS C
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII- 239
+L+ G+QVH VK GF +L+DMY KCG++ + +F+ + D + W+ +I
Sbjct: 173 VLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIA 232
Query: 240 ----VGCFECSCFTLSAL---------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
VGC++ + S + V + + + L + +L + +
Sbjct: 233 CYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVA 292
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN++ISG+ + + L + S G+ TF S L A N+ F Q+H
Sbjct: 293 WNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE--GQQMHAA 350
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
V G + + VGS+LI+LYA+ G A +F +K++V W+ ++ G ++ L A
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEA 410
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+F+ M+ ++F S+L C+ L+S GKQVH +K + + +DM
Sbjct: 411 IRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDM 470
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G I D ALF +P +D +SW + VG QN +EA+ + M + P++++F
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
++AC + E I + +YG+ + ++DL + G + + ++ A++
Sbjct: 531 STAINACSNIRATETGKQIHC-LAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVD 589
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
I A + + +N + + + + L
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 195/498 (39%), Gaps = 115/498 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C S GK +HC IK + +F N L MY+ + ++ DA LF +
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 488
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +SW + N A+ + M +G + P+ +S + ACS + G+
Sbjct: 489 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATETGK 547
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------------- 164
IH + + + + ++L+D+Y K G + +RK+F Q
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607
Query: 165 -SNWAASAYGNV---------ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL- 204
+ A + V ++S+LSG GKQVH + +K G +D L
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVG---------------------- 241
SL +YLK ++D L MP+ +++ WT II G
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 242 -------------CFECSCF--------------------TLSALVDMYSNCNVLCEARK 268
C + + F SAL+DMYS C + + +
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F + + ++ WNSMI G+ N +EA+ L + + D TF L A
Sbjct: 788 AFKELKNKQ-----DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIA 842
Query: 329 CIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
C + L++ F +V+GL LD+ + IDL R G+++ A E +LP
Sbjct: 843 CTHSGLISEGRHFFGPMRKVYGLTP----RLDHY--ACFIDLLGRGGHLQEAQEAIDQLP 896
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W+ + C H
Sbjct: 897 FRPDGVVWATYLAACRMH 914
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 9/269 (3%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+S+ +HG I+ G L +G +L++LY + G V A ++ A S L+
Sbjct: 71 HSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLS 130
Query: 396 GCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+ G FR + + +QF ++ VL CS + L G+QVH VK GF
Sbjct: 131 CHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 190
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+DMY KCG++ + +F + D + W+ +I + G +EA+A F M
Sbjct: 191 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 250
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ P+++T + ++S +G ++ A + M P + ++ Q+G
Sbjct: 251 DKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP-----TPSTVAWNAVISGHAQSGL 305
Query: 575 FDDAEQLIAEM---PFKPDKTIWASMLKA 600
+ L +M P ++ +ASML A
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSA 334
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ C + GK +H I K G + L+ MY+ + + + F
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAF 789
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
E+ K +I+ W +M+ + N + A+ L+ M E ++P+ + VL AC+ SG
Sbjct: 790 KELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGL 848
Query: 121 LDLGR 125
+ GR
Sbjct: 849 ISEGR 853
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/684 (31%), Positives = 340/684 (49%), Gaps = 92/684 (13%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+S+HC+IIK GL ++ NNL++ YA SL AH +FDEM K+ SW T+++ Y
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 82 NKRPNWAIRLYNHML---------------EYG---------------SVEPNGFMYSAV 111
+ RL M ++G V P+ F S V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAA 169
L +C+ + LD+GR IH + + L + +LL+MY KCG + + +FD+ +
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT---- 204
Query: 170 SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
N++ WN +LI +Y++ G+ + + F MP+
Sbjct: 205 --VKNISTWN--------------------------ALISLYMQSGQFELAASQFEKMPD 236
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD+VSW +I G + + L ALV N F S +A A
Sbjct: 237 RDIVSWNSMISG-YSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACA--------- 286
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
N E + + IH+ + ++ T + A I++ + +++ LIV
Sbjct: 287 ----------NLEKLNIGKQIHAYILRAETETSGAVGNALISM--YAKSGGVEIARLIVE 334
Query: 350 SGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
L+ I ++L+D Y +LGNVK A E+F++L +DVVAW+ +I+G ++GL + A
Sbjct: 335 HNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDAL 394
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LFR M+N + N + ++++L V S L L GKQ+HA +K G +LI MY
Sbjct: 395 ELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMY 454
Query: 468 LKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
K G I+ +F +P ++++VSWT +I+ Q+G KEAI F+ M+ +KP+ IT
Sbjct: 455 AKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++GVLSAC H GLVE+ + M + +EP L HY CM+DL G+AG +A I M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +PD W S+L +C+ H N L + AE+LL P + Y+ L+NVY+ G W++ +
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 646 KVRKAGKKLG-EKKAGMSWIEVSS 668
+ RK K G K+ G+SWI + +
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKN 657
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD-EMARKNIVSWTTMVT 77
++ GK +H IK G S N L++MYA ++N A ++FD +K IVSWT+M+
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR-EKL 136
A + AI L+ ML G ++P+ Y VL AC+ G ++ GR + +T ++
Sbjct: 485 ALAQHGLGKEAINLFERMLSVG-MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEI 543
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
E ++D+Y + G L + N+A W S+L+ K +H
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEAYL--FIESMPIEPDNIA-WGSLLASCK-IHKNADLAK 599
Query: 197 FEKEDVTLT---------SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
E + L +L ++Y CG+ ++ M +R V GI
Sbjct: 600 VAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGI 650
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/684 (31%), Positives = 343/684 (50%), Gaps = 92/684 (13%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+S+HC+IIK GL ++ NNL++ YA SL AH +FDEM K+ SW T+++ Y
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 82 NKRPNWAIRLYNHML---------------EYG---------------SVEPNGFMYSAV 111
+ RL M ++G V P+ F S V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAA 169
L +C+ + LD+GR IH + + L + +LL+MY KCG + + +FD+ +
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT---- 204
Query: 170 SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
N++ WN +LI +Y++ G+ + + F MP+
Sbjct: 205 --VKNISTWN--------------------------ALISLYMQSGQFELAASQFEKMPD 236
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD+VSW +I G YS EA +F + + + N L S
Sbjct: 237 RDIVSWNSMISG---------------YSQQGYNLEALAIFSKMLNEPSLKPDNFTL-AS 280
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
++S N E + + IH+ + ++ T + A I++ + +++ LIV
Sbjct: 281 ILSACA----NLEKLNIGKQIHAYILRAETETSGAVGNALISM--YAKSGGVEIARLIVE 334
Query: 350 SGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
L+ I ++L+D Y +LGNVK A E+F++L +DVVAW+ +I+G ++GL + A
Sbjct: 335 HNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDAL 394
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LFR M+N + N + ++++L V S L L GKQ+HA +K G +LI MY
Sbjct: 395 ELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMY 454
Query: 468 LKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
K G I+ +F +P ++++VSWT +I+ Q+G KEAI F+ M+ +KP+ IT
Sbjct: 455 AKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++GVLSAC H GLVE+ + M + +EP L HY CM+DL G+AG +A I M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +PD W S+L +C+ H N L + AE+LL P + Y+ L+NVY+ G W++ +
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 646 KVRKAGKKLG-EKKAGMSWIEVSS 668
+ RK K G K+ G+SWI + +
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKN 657
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD-EMARKNIVSWTTMVT 77
++ GK +H IK G S N L++MYA ++N A ++FD +K IVSWT+M+
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR-EKL 136
A + AI L+ ML G ++P+ Y VL AC+ G ++ GR + +T ++
Sbjct: 485 ALAQHGLGKEAINLFERMLSVG-MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEI 543
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
E ++D+Y + G L + N+A W S+L+ K +H
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEAYL--FIESMPIEPDNIA-WGSLLASCK-IHKNADLAK 599
Query: 197 FEKEDVTLT---------SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
E + L +L ++Y CG+ ++ M +R V GI
Sbjct: 600 VAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGI 650
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 311/594 (52%), Gaps = 70/594 (11%)
Query: 38 IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
+F N + + +A ++F+EM ++++VSW +M+ Y+ N + + A L++
Sbjct: 39 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF-- 96
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
V N ++ +L + G ++ R + E +T E + V N ++ YV+ G L
Sbjct: 97 ---VGKNIRTWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLK 149
Query: 157 -TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
RKLFD+ NVA WNS+++G Y C
Sbjct: 150 NARKLFDEMPE------KNVASWNSVVTG--------------------------YCHCY 177
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVG-----------------CFECSCFTLSALVDMYS 258
+ + LF+ MPER+ VSW +I G C + ++ + ++ ++
Sbjct: 178 RMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFA 237
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
C L +A +L+++ N A W +MI+G+V NE++ EA+ LL +H SG
Sbjct: 238 QCGRLDDAIQLYER-----VPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPS 292
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+FTSAL AC N+ + +H L + +G + + V + LI +YA+ GNV+ +
Sbjct: 293 DSSFTSALSACANIGDV--EIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 350
Query: 379 FH--RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
F R+PK+DVV+W+ +I + G +A LF DM+ NQ ++S+L C L
Sbjct: 351 FRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLG 410
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+++ G+Q HA K GF+ SLI MY KCG +DG +F+ MPE D+++W ++V
Sbjct: 411 AIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLV 469
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
GC QNG KEAI F++M + P++++FLGVL AC HAGLV+E W F SM +YG+
Sbjct: 470 GCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIM 529
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
P + HY CMVDLLG+AG +AE LI MP KPD IW ++L AC H N +L+
Sbjct: 530 PLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNNELL 583
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 212/525 (40%), Gaps = 109/525 (20%)
Query: 20 KQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
K+G+ R + +++ ++ + N ++S Y L +A KLFDEM KN+ SW ++VT
Sbjct: 113 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTG 172
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVE---------------------------PNGFMYSAV 111
Y R + A L++ M E SV N + ++ +
Sbjct: 173 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTTM 232
Query: 112 LKACSLSGDLDLGRLIHERITRE--------------KLEYDTVLMNTLLDMYVKCGSLT 157
+ A + G LD ++ER+ + + E + L++++ + GS+
Sbjct: 233 IAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELH-RSGSVP 291
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
D A SA N+ + G+ +H+ +K G + + LI MY KCG +
Sbjct: 292 S---DSSFTSALSACANIG----DVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNV 344
Query: 218 DDGLALFNF--MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+DG +F MP+RDVVSWT II
Sbjct: 345 EDGSHVFRTIRMPKRDVVSWTAII------------------------------------ 368
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
S YV E A+ L + + G+ + T TS L AC NL
Sbjct: 369 ----------------SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAI 412
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+ Q H LI G++ VG++LI +Y + G + +F +P+ D++ W+ +++
Sbjct: 413 --KLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLV 469
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFE 454
GC ++GL A +F M +Q VL CS + G ++ K G
Sbjct: 470 GCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIM 529
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGC 498
T ++D+ + G + + AL + MP + D V W ++ C
Sbjct: 530 PLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 574
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG +IK G+ H I K G +F GN+L++MY D +F+EM
Sbjct: 399 VTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK-CGYEDGFCVFEEMP 457
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++++W ++ N AI+++ M E + P+ + VL ACS +G +D G
Sbjct: 458 EHDLITWNAVLVGCAQNGLGKEAIKIFEQM-EVEGILPDQMSFLGVLCACSHAGLVDEG 515
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G +++ +F M +RDVVSW +I G QNG+ EA F + ++ T+
Sbjct: 51 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTI 106
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+L+ G +EEA +F SM E ++ + M+ Q G +A +L EMP K
Sbjct: 107 LLTGYAKEGRIEEAREVFESMT-----ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK 161
Query: 589 PDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSK--YVMLSNVYATLGMWDS 643
+ W S++ C + ++ A +L PE S VM+S W++
Sbjct: 162 -NVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVMISGYVHISDYWEA 213
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 219/754 (29%), Positives = 361/754 (47%), Gaps = 121/754 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ C +++ GK++H II GL D + ++L+++Y + DA K+FD++ +
Sbjct: 60 LKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGV 119
Query: 68 ---NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++ W +++ Y + L M+++G ++ +G+ G
Sbjct: 120 SVDDVTIWNSIIDGYFRFGQ------LEEGMVQFGRMQSSGY---------------KEG 158
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLFDQYS----NWAASAYGN 174
+ IH I R L +D L L+D Y KCG T +KL D+ + N +G
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218
Query: 175 VALWNSML-------------------------------SGGKQVHAFCVKRGFEKEDVT 203
LW + L S GKQVH +K GFE +
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL---------- 253
TSL+ MY KC I+ +FN +P++++ W +I + + + AL
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALI-SAYVGNGYAYDALRIYKQMKLCT 337
Query: 254 --VDMYSNCNVLCEAR----------------------------KLFDQYSSWAASAYGN 283
D ++ NVL + L YS + S Y N
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397
Query: 284 ----------VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
V W S+ISG+ N + +EA+ + + + DS S + AC L
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ +HG ++ SG +LD V S+L+D+Y++ G + A +F +P K++VAW+ +
Sbjct: 458 KVD--LGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSI 515
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I ++ L L+ LF ++ ++ + +SVL S +A+L +GK VH + V+
Sbjct: 516 ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +LIDMY+KCG + +F+ + E+++V+W +I G G +G +AI F E
Sbjct: 576 PFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE 635
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M S +KP+++TFL +LS+C H+GL+EE +F MK ++G+EP +EHY +VDL G+AG
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
C DA + MP +PD++IW S+L +C+ H N +L ++A +LL P S YV L N
Sbjct: 696 CLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLN 755
Query: 634 VYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+Y +WD + +R + K+ G KK G SWIEV
Sbjct: 756 LYGEAELWDRTANLRASMKEKGLKKTPGCSWIEV 789
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 241/552 (43%), Gaps = 89/552 (16%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A++LY V F Y ++LKAC+ +L G+ IH I L D + ++L+
Sbjct: 40 ALKLYTK----SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95
Query: 148 DMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG--------------------- 184
++YVKCG+ T K+FDQ S +V +WNS++ G
Sbjct: 96 NIYVKCGTFTDAVKVFDQLPKSGVSV-DDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG 154
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWTGIIV 240
GKQ+H++ V+ + T+LID Y KCG + LF + +R ++V+W +I
Sbjct: 155 YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIG 214
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G +G LW + + Y+L +
Sbjct: 215 G---------------------------------------FGENGLWENSLEYYLLAKTE 235
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+ S +FT L AC F S F QVH + G+E D V +
Sbjct: 236 NVKVV-------------SSSFTCTLSAC-GQGEFVS-FGKQVHCDAIKVGFEDDPYVHT 280
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L+ +Y + ++SA ++F+ +P K++ W+ LI +G A +++ M
Sbjct: 281 SLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLS 340
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ F I +VL S G+ +H VKR + ++L+ MY K G+ + ++F
Sbjct: 341 DSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIF 400
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M ERDVV+W +I G QN + KEA+ +F+ M +KP+ ++SAC V+
Sbjct: 401 STMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVD 460
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
TI + GL+ + ++D+ + G + A + ++MP K + W S++ +
Sbjct: 461 LGCTIH-GFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSII-S 517
Query: 601 CETHNNTKLVSI 612
C NN +SI
Sbjct: 518 CYCRNNLPDLSI 529
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 144/309 (46%), Gaps = 32/309 (10%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q + I L S + +T+ S LKAC +L N ++ +H I+T+G D +
Sbjct: 33 QQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNL--QYGKTIHSSIITTGLHSDQYI 90
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKK-----DVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
S+LI++Y + G A+++F +LPK DV W+ +I G + G + F M
Sbjct: 91 TSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM 150
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+S + GKQ+H++ V+ + T+LID Y KCG
Sbjct: 151 QSSG--------------------YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRP 190
Query: 474 DDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ LFK + +R ++V+W +I G G+NG + ++ Y+ +K +F LSA
Sbjct: 191 TEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSA 250
Query: 533 CRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
C V + ++K + +P++ + ++ + G+ + AE++ E+P K +
Sbjct: 251 CGQGEFVSFGKQVHCDAIKVGFEDDPYV--HTSLLTMYGKCQMIESAEKVFNEVPDK-EI 307
Query: 592 TIWASMLKA 600
+W +++ A
Sbjct: 308 ELWNALISA 316
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/678 (30%), Positives = 350/678 (51%), Gaps = 70/678 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
++ C S ++GKS+H ++I G + D + +L +YA L+D A KLF+EM
Sbjct: 78 IQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPE 137
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+ +W TM+ AY A +++ ML+ G V P+ F +++ L+ C D G+
Sbjct: 138 RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIG-VCPDNFTFASALRVCGALRSRDGGKQ 196
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG 184
+H ++ + DT + N L+DMY KC K+FD+ N WNS++S
Sbjct: 197 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE------RNQVTWNSIISA 250
Query: 185 GKQVHAFC-----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
Q F + G + + T T+L+ + + G + + ++
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
IIV + LV MYS C L A+++F++ A N WNSMI G
Sbjct: 311 K--NIIVE---------TELVHMYSECGRLNYAKEIFNRM------AERNAYSWNSMIEG 353
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y N + +EA+ L + +G+ D ++ +S L +C++L +S+ ++H IV + E
Sbjct: 354 YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL--SDSQKGRELHNFIVRNTME 411
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKD--VVAWSGLIMGCTKHGLNSLAYLLFR 411
+ I+ L+D+YA+ G++ A +++ + KKD W+ ++ G GL ++ F
Sbjct: 412 EEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFL 471
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+M+ S+ + + + +++ + + T+L+DMY KCG
Sbjct: 472 EMLESDIEYDVLTMVTIVNLL-------------------------VLETALVDMYSKCG 506
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
I +F M +++VSW +I G ++G +KEA+ ++EM + + PNE+TFL +LS
Sbjct: 507 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GLVEE IFTSM+ +Y +E EHY CMVDLLG+AG +DA++ + +MP +P+
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 626
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+ W ++L AC H + + + A++L P++P YV++SN+YA G W + +R+
Sbjct: 627 STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 686
Query: 652 KKLGEKK-AGMSWIEVSS 668
K G KK G+SWIE++S
Sbjct: 687 KMKGVKKDPGVSWIEINS 704
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 203/478 (42%), Gaps = 105/478 (21%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR CG RS GK +H ++I G D F GN L+ MYA K+FDEM +N
Sbjct: 181 ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN 240
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEY-GSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
V+W ++++A N A+ L+ M E ++P+ F ++ +L C+ + + GR I
Sbjct: 241 QVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 300
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + R + + ++ L+ MY +CG L +++F++ A N WNSM+ G
Sbjct: 301 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM------AERNAYSWNSMIEGY 354
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
G+++H F V+ E+E
Sbjct: 355 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 414
Query: 202 VTLTSLIDMYLKCGEIDDGLALFN--FMPERDVVSWTGIIVGC----------------- 242
+ L+DMY KCG +D +++ +R+ W I+ G
Sbjct: 415 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEML 474
Query: 243 ---FECSCFTL----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
E T+ +ALVDMYS C + +AR +FD + N+ WN+
Sbjct: 475 ESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNG------KNIVSWNA 528
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MISGY + ++EA+ L + GM + TF + L AC S L GL +
Sbjct: 529 MISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSAC-------SHTGLVEEGLRIF 581
Query: 350 SGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ + DY + + ++DL R G ++ A E ++P + +V W L+ C H
Sbjct: 582 TSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 639
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD--- 475
DVN SS+++ C S +RGK +H + G+ + +T ++ +Y + G +DD
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
LF+ MPER++ +W +I+ + EA F M++ + P+ TF L C
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 222/687 (32%), Positives = 371/687 (54%), Gaps = 59/687 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM--ARK 67
L+ C + ++ GK LH ++ L D N+L+++Y+ A +F M +++
Sbjct: 59 LKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKR 118
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++VS++++++ + +N+ A+ +++ +L V PN + ++AV++AC G G +
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178
Query: 128 HERITREK-LEYDTVLMNTLLDMYVKCGSLT-----RKLFDQYSNWAASAYGNVALWNSM 181
+ + + + L+DM+VK SL RK+FD+ NV W M
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMRE------KNVVTWTLM 232
Query: 182 LSGGKQ-------VHAFC---VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ER 230
++ Q + F V G+ + TLT LI + C EI F+ +
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISV---CAEI-------QFLSLGK 282
Query: 231 DVVSW---TGIIVG-CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
++ SW +G+++ C CS LVDMY+ C ++ EARK+FD NV
Sbjct: 283 ELHSWVIRSGLVLDLCVGCS------LVDMYAKCGLVQEARKVFDGMREH------NVMS 330
Query: 287 WNSMISGYVLNE--QNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
W ++++GYV EA+ + S+ + G+ + +TF+ LKAC +L +F+ F QV
Sbjct: 331 WTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD--FGEQV 388
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH-GL 402
HG + G VG+ L+ +YA+ G ++SA + F L +K++V+ + + K L
Sbjct: 389 HGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNL 448
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
NS L R++ V+ F +S+L +C+ ++ +G+Q+HA VK GF + +
Sbjct: 449 NS-EQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LI MY KCG + L +F M + +V++WT II G ++G A +A+ F M+++ +KPN
Sbjct: 508 LISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPN 567
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
++T++ VLSAC H GL++EAW FTSM+ +G+ P +EHY CMVDLLG++G +A + I
Sbjct: 568 DVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFI 627
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MPF D +W + L +C H NTKL A+ +L P DP+ Y++LSN+YAT G W+
Sbjct: 628 NSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWE 687
Query: 643 SLSKVRKAGK-KLGEKKAGMSWIEVSS 668
++ +RK K K K+AG SWIEV +
Sbjct: 688 DVAAIRKNMKQKQITKEAGSSWIEVEN 714
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/683 (31%), Positives = 352/683 (51%), Gaps = 41/683 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS--QDIFTGNNLLSMYADFTSLNDAH 58
+ ++ +V+ LR C R +KQ K++H ++K S + N++ Y+ + ++ A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC 125
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+LFD+M+++N SWT ++ N + M G + P+ F YS +L+ C
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGL 184
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
++LG ++H +I T + LL+MY K +++ D Y + NV W
Sbjct: 185 DSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAK----LQEIEDSYKVFNTMTEVNVVSW 240
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC---GEIDDGLALFNFMPE----RD 231
N+M++G F D+ L + D++L+ G D RD
Sbjct: 241 NAMITG------------FTSNDLYLDAF-DLFLRMMGEGVTPDAQTFIGVAKAIGMLRD 287
Query: 232 V-----VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
V VS + +G + + +AL+DM S C L EAR +F+ S + + A
Sbjct: 288 VNKAKEVSGYALELGV-DSNTLVGTALIDMNSKCGSLQEARSIFN--SHFITCRFN--AP 342
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN+MISGY+ + NE+A+ L + + + + +D YT+ S A L + +VH
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLS--LGKKVHAR 400
Query: 347 IVTSGYELDYIVGSNLI-DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+ SG E++Y+ SN + + YA+ G+++ ++F+R+ +D+++W+ L+ ++
Sbjct: 401 AIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDK 460
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A +F +M NQF SSVL C+ L L G+QVH K G + + ++L+D
Sbjct: 461 AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVD 520
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG + D +F + D VSWT II G Q+G +A+ F+ M+Q ++PN +T
Sbjct: 521 MYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVT 580
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL AC H GLVEE F MK YGL P +EHY C+VDLL + G +DA + I+ M
Sbjct: 581 FLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRM 640
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +P++ +W ++L AC H N +L + A+++L+ E+ + YV+LSN Y G +
Sbjct: 641 PVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGL 700
Query: 646 KVRKAGKKLGEKK-AGMSWIEVS 667
+R K+ G KK G SWI V+
Sbjct: 701 SLRHVMKEQGVKKEPGCSWISVN 723
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 223/690 (32%), Positives = 365/690 (52%), Gaps = 54/690 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L+ C + R + GK +H R+I++ + D N+L+S+Y+ L A +
Sbjct: 60 MDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDV 119
Query: 61 FDEMAR---KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
F+ M R +++VSW+ M+ + +N R AI+L+ LE G V PN + Y+AV++ACS
Sbjct: 120 FETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLV-PNDYCYTAVIRACSN 178
Query: 118 SGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYSNWAASAYG 173
S + +GR+I + + E D + +L+DM+VK + K+FD+ S
Sbjct: 179 SDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL------ 232
Query: 174 NVALWNSMLSGGKQ-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
NV W M++ Q + F V GFE + TL+S+ + C E++
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV---FSACAELE------ 283
Query: 225 NFMPERDVVSWT--GIIVGCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAAS 279
N R + SW + ECS LVDMY+ C+ + + RK+FD+ +
Sbjct: 284 NLSLGRQLHSWAIRSGLADDVECS------LVDMYAKCSADGSVDDCRKVFDRMQDHS-- 335
Query: 280 AYGNVALWNSMISGYVLN-EQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNS 337
V W ++I+GY+ N EAI L S + + G + +TF+SA KAC N+ +
Sbjct: 336 ----VMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSD--P 389
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R QV G G + V +++I ++ + ++ A F L +K++V+++ + G
Sbjct: 390 RVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGT 449
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ A+ L ++ V+ F +S+L + + SLR+G+Q+H+ +K G
Sbjct: 450 CRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQ 509
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI MY KCG ID +F M R+V+SWT +I G ++G A+ + F +M +
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKE 569
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+T++ +LSAC H GLV E W F SM ++ ++P +EHY CMVDLL +AG D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A + I MPF+ D +W + L AC H+NT+L + A ++L P +P+ Y+ LSN+YA+
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYAS 689
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ +++R+ K+ K+ G SWIEV
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 217/691 (31%), Positives = 344/691 (49%), Gaps = 112/691 (16%)
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+N R + AI HM+ GS P+ YS LK C + D+G L+HE++T+ L+ D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 141 VLMNTLLDMYVKCGSL------------TRKLFD---QYSNWAASAYGNVALWN------ 179
V +N+L+ +Y KCG +R L S +A + G AL
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 180 --------------------SMLSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKC-GEI 217
+S G + F +K G+ + DV + LIDM++K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 218 DDGLALFNFMPERDVVSWT--------------------GIIVGCFECSCFTLSA----- 252
+F MPER+ V+WT +I +E FTLS
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 253 ------------------------------LVDMYSNCNV---LCEARKLFDQYSSWAAS 279
L++MY+ C+V +C ARK+FDQ
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH--- 338
Query: 280 AYGNVALWNSMISGYVLNE-QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
NV W +MI+GYV +EEA+ L + + + + +TF+S LKAC NL R
Sbjct: 339 ---NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAAL--R 393
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
QV V G+ V ++LI +YAR G + A + F L +K++++++ +I
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
K+ + A LF ++ + + F +S+L + + ++ +G+Q+HA +K G +
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+LI MY +CG I+ +F+ M +R+V+SWT II G ++G A +A+ F +M++
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PNE+T++ VLSAC H GLV E W F SM E+G+ P +EHY C+VD+LG++G +A
Sbjct: 574 VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
Q I MP+K D +W + L AC H N +L A+ ++ P DP+ Y++LSN+YA++
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASI 693
Query: 639 GMWDSLSKVRKAGK-KLGEKKAGMSWIEVSS 668
WD +S +RKA K K K+AG SW+EV +
Sbjct: 694 SKWDEVSNIRKAMKEKXLIKEAGCSWVEVEN 724
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 9/256 (3%)
Query: 291 ISGYVLNEQN----EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
++G ++ E N +AI+ L H+ G D T++ LK CI +F+ VH
Sbjct: 34 LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD--IGTLVHEK 91
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSL 405
+ S +LD + ++LI LY++ G + A +F + +D+++WS ++ + +
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLI 464
A L F DMI + N++ ++ + CS + G + F +K G+ + D+ + LI
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211
Query: 465 DMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
DM++K G++ +F+ MPER+ V+WT +I Q G A EAI F +MI S +P+
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDR 271
Query: 524 ITFLGVLSACRHAGLV 539
T GV+SAC + L+
Sbjct: 272 FTLSGVISACANMELL 287
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 214/683 (31%), Positives = 352/683 (51%), Gaps = 41/683 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS--QDIFTGNNLLSMYADFTSLNDAH 58
+ ++ +V+ LR C R +KQ K++H ++K S + N++ Y+ + ++ A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC 125
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+LFD+M+++N SWT ++ N + M G + P+ F YS +L+ C
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGL 184
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
++LG ++H +I T + LL+MY K +++ D Y + NV W
Sbjct: 185 DSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAK----LQEIEDSYKVFNTMTEVNVVSW 240
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC---GEIDDGLALFNFMPE----RD 231
N+M++G F D+ L + D++L+ G D RD
Sbjct: 241 NAMITG------------FTSNDLYLDAF-DLFLRMMGEGVTPDAQTFIGVAKAIGMLRD 287
Query: 232 V-----VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
V VS + +G + + +AL+DM S C L EAR +F+ S + + A
Sbjct: 288 VNKAKEVSGYALELGV-DSNTLVGTALIDMNSKCGSLQEARSIFN--SHFITCRFN--AP 342
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN+MISGY+ + NE+A+ L + + + + +D YT+ S A L + +VH
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLS--LGKKVHAR 400
Query: 347 IVTSGYELDYIVGSNLI-DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+ SG E++Y+ SN + + YA+ G+++ ++F+R+ +D+++W+ L+ ++
Sbjct: 401 AIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDK 460
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A +F +M NQF SSVL C+ L L G+QVH K G + + ++L+D
Sbjct: 461 AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVD 520
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG + D +F + D VSWT II G Q+G +A+ F+ M+Q ++PN +T
Sbjct: 521 MYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVT 580
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL AC H GLVEE F MK YGL P +EHY C+VDLL + G +DA + I+ M
Sbjct: 581 FLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRM 640
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +P++ +W ++L AC H N +L + A+++L+ E+ + YV+LSN Y G +
Sbjct: 641 PVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGL 700
Query: 646 KVRKAGKKLGEKK-AGMSWIEVS 667
+R K+ G KK G SWI V+
Sbjct: 701 SLRHLMKEQGVKKEPGCSWISVN 723
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 220/763 (28%), Positives = 359/763 (47%), Gaps = 121/763 (15%)
Query: 14 GQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G+R+ I+ G+ +H + + LS D +++MY+ S +D+ +FD + +KN+ W
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++++Y+ N+ + + ++ M+ + P+ F + V+KAC+ ++ +G +H +
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML---------- 182
+ +L D + N L+ Y GS++ D + N+ WNSM+
Sbjct: 212 KTRLVEDVFVSNALVSFYGTNGSVS----DALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267
Query: 183 --------------------------------------SGGKQVHAFCVKRGFEKEDVTL 204
GK VH +K +KE V
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN 327
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------------- 241
+L+DMY KCG I+D +F ++VVSW ++ G
Sbjct: 328 NALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGD 387
Query: 242 --------------CFECS---------CFTL------------SALVDMYSNCNVLCEA 266
CFE S C++L +A V Y+ C L A
Sbjct: 388 LRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYA 447
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++F S ++ WN++I GY + ++ + SSG+ D +T S L
Sbjct: 448 HRVFCSIRSKTVNS------WNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLL 501
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC + + + +VHGLI+ + E D V +L+ LY G + +A LF + K
Sbjct: 502 SACSQIKSL--KLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT 559
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ ++ G ++G A LFR M+ + + SV CS L SLR G++ H
Sbjct: 560 LVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHG 619
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ +K E S+IDMY K G + + +F + ER V SW +++G G +GRAKE
Sbjct: 620 YALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKE 679
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
AI F+EM ++ P+E+TFLGVL+AC H+GLV E T MK +G+ P L+HY C++
Sbjct: 680 AIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVI 739
Query: 567 DLLGQAGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
D+L +AG D+A ++ EM +P IW +L +C H N ++ IA +L + PE P
Sbjct: 740 DMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKP 799
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
YV+LSN+YA G WD + KVR+ K++ K AG SWIE++
Sbjct: 800 ENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELN 842
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + L C Q +S+K GK +H II+ L +D F +LLS+Y L+ AH LF
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLF 552
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M K +VSW TMV Y N P A+ L+ M+ YG V+P +V ACSL L
Sbjct: 553 DAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG-VQPCEISMMSVFGACSLLPSL 611
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
LGR H + LE + + +++DMY K GS + + + + +VA WN+M
Sbjct: 612 RLGREAHGYALKCLLEDNAFIACSVIDMYAKNGS----VMESFKVFNGLKERSVASWNAM 667
Query: 182 LSG 184
+ G
Sbjct: 668 VMG 670
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 188/505 (37%), Gaps = 120/505 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + L C + R I GK +H +K L +++ N L+ MY+ +NDA +F
Sbjct: 288 DVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIF 347
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGD 120
KN+VSW TMV +++ + L ML G + + + C
Sbjct: 348 KLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESV 407
Query: 121 L-DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L +L L + +E + + ++ N + Y KCGSL+ + + + V WN
Sbjct: 408 LPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSY----AHRVFCSIRSKTVNSWN 463
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+++ G GK+VH ++
Sbjct: 464 ALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRN 523
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL-- 253
E++ SL+ +Y+ CGE+ LF+ M ++ +VSW ++ G + + F AL
Sbjct: 524 RLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQ-NGFPERALSL 582
Query: 254 ----------------VDMYSNCNVLCEAR------------------------------ 267
+ ++ C++L R
Sbjct: 583 FRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAK 642
Query: 268 --KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ + + + +VA WN+M+ GY ++ + +EAI L + +G C D TF
Sbjct: 643 NGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGV 702
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN--------LIDLYARLGNVKSALE 377
L AC + L GL ++ + G N +ID+ R G + AL+
Sbjct: 703 LTAC-------NHSGLVHEGLTYLD--QMKTLFGMNPTLKHYACVIDMLVRAGKLDEALK 753
Query: 378 LFHRLPKKD--VVAWSGLIMGCTKH 400
+ ++ V W+ L+ C H
Sbjct: 754 IATEEMSEEPGVGIWNFLLSSCRIH 778
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/699 (30%), Positives = 357/699 (51%), Gaps = 71/699 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + K G +H ++ G D+ +G+ LL MYA L+++ +F M +KN
Sbjct: 188 LKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNW 247
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW+ ++ N + ++++ M + G V + +Y++VLK+C+ DL LG +H
Sbjct: 248 ISWSAIIAGCVQNNFLDGGLKMFKEMQKVG-VGVSQSIYASVLKSCATLPDLRLGTQLHA 306
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ D ++ LDMY KC ++ ++LFD N N+ +N+M++G Q
Sbjct: 307 HALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL------NLQSYNAMITGYSQ 360
Query: 188 ----VHAFCVKRGFEK-----EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
A + R K ++++L+ + + +GL L + +
Sbjct: 361 KDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSN------- 413
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
F + +A +DMY C L EA ++FD+ A + WN++I+ + NE
Sbjct: 414 ----FSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVS------WNAIIAAHEQNE 463
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACI-NLLNFNSRFALQVHGLIVTSGYELDYI 357
+ + + +L + SGM D YTF S LKAC + LN +++H IV G +
Sbjct: 464 ERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNH----GMEIHTTIVKLGMASNPY 519
Query: 358 VGSNLIDLYARLGNVKSALELFHRL-------------------PK--------KDVVAW 390
+GS+L+D+Y++ G + A ++ +++ PK + +V+W
Sbjct: 520 IGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSW 579
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + A F M+ ++F S+VL C+ LAS+ GKQ+HA +K
Sbjct: 580 NAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIK 639
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ + + ++L+DMY KCG + D +F+ P RD V+W +I G +G +EAI
Sbjct: 640 KELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKL 699
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ M+ + PN TF+ +L AC H GLVE F MK EYGL+P LEHY MVD+LG
Sbjct: 700 FESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILG 759
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAEQLLATSPEDPSKYV 629
++G + A +LI EMPF+ D IW ++L AC+ + N + + A LL P+D S Y+
Sbjct: 760 KSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYI 819
Query: 630 MLSNVYATLGMWDSLSKVRKAGK--KLGEKKAGMSWIEV 666
+LSN+YA GMWD S++R A + KL +K+ G SW+E+
Sbjct: 820 LLSNIYADAGMWDKASELRTAMRSDKL-KKEPGCSWVEI 857
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 154/689 (22%), Positives = 270/689 (39%), Gaps = 169/689 (24%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
+S V K C+ +LG+ H + + N LL +Y+ CG+L KLFD
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 166 -----NWAASAYG--------------------NVALWNSMLSG---------------- 184
+W A +G +V WNSMLSG
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
G Q+H ++ G++ + V+ ++L+DMY KC
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKR 231
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC------------------------------S 246
+D+ +F MP+++ +SW+ II GC + S
Sbjct: 232 LDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKS 291
Query: 247 CFTL-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
C TL +A +DMY+ CN + +A++LFD +
Sbjct: 292 CATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL----- 346
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
N+ +N+MI+GY + A+ L + S + D + + AL+AC + + L
Sbjct: 347 -NLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSE--GL 403
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+HGL S + + V + ID+Y + + A +F + +KD V+W+ +I ++
Sbjct: 404 QLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNE 463
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
S + M+ S + +++ SVLK C+ SL G ++H VK G +
Sbjct: 464 ERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGS 522
Query: 462 SLIDMYLKCGEIDDGLAL-------------FKFMPE--------------RDVVSWTGI 494
SL+DMY KCG ID+ + + PE +VSW I
Sbjct: 523 SLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAI 582
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G ++++A +F M++ + P++ T+ VL C + + I + +
Sbjct: 583 ISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK-- 640
Query: 555 LEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN-NTKLVS 611
E + Y C +VD+ + G D+ + + P + D W +M+ H + +
Sbjct: 641 -ELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMICGYAHHGMGEEAIK 698
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ +L + + +V L A +G+
Sbjct: 699 LFESMVLMNIMPNHATFVSLLRACAHMGL 727
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 180/458 (39%), Gaps = 125/458 (27%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR C + + +G LH K S++I N + MY +L++A ++FDEM RK+
Sbjct: 389 ALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKD 448
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD-LDLGRLI 127
VSW ++ A+ N+ + + + ML G +EP+ + + +VLKAC +GD L+ G I
Sbjct: 449 AVSWNAIIAAHEQNEERSKTLNILVSMLRSG-MEPDEYTFGSVLKAC--AGDSLNHGMEI 505
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCG------SLTRKLF------DQYSNWAAS----- 170
H I + + + + ++L+DMY KCG + K+F + YS +
Sbjct: 506 HTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPK 565
Query: 171 ------AYGNVALWNSMLSG---------------------------------------- 184
+ WN+++SG
Sbjct: 566 GIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLA 625
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
GKQ+HA +K+ + + ++L+DMY KCG + D +F P RD V+W +I
Sbjct: 626 SIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMIC 685
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y +
Sbjct: 686 G----------------------------------------------------YAHHGMG 693
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EEAI L + + + TF S L+AC + + R H + G + S
Sbjct: 694 EEAIKLFESMVLMNIMPNHATFVSLLRACAH-MGLVERGLDYFHMMKKEYGLDPRLEHYS 752
Query: 361 NLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGC 397
N++D+ + G V+ ALEL +P + D V W L+ C
Sbjct: 753 NMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSAC 790
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/664 (32%), Positives = 354/664 (53%), Gaps = 42/664 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ G +H IK G I+ ++L++MY +DA ++FD +++KN++ W M+
Sbjct: 232 ALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLG 291
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+ N + + L+ M+ G + P+ F Y+++L C+ L++GR +H I +++
Sbjct: 292 VYSQNGFLSNVMELFLDMISCG-IHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFT 350
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAF 191
+ + N L+DMY K G+L K F+ + Y + WN+++ G Q AF
Sbjct: 351 SNLFVNNALIDMYAKAGALKEAGKHFEHMT------YRDHISWNAIIVGYVQEEVEAGAF 404
Query: 192 CVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ R G ++V+L S++ CG I + + +G E +
Sbjct: 405 SLFRRMILDGIVPDEVSLASILS---ACGNI-------KVLEAGQQFHCLSVKLG-LETN 453
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F S+L+DMYS C + +A K YSS + +V N++I+GY L + +E+I L
Sbjct: 454 LFAGSSLIDMYSKCGDIKDAHK---TYSSMPERSVVSV---NALIAGYAL-KNTKESINL 506
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDL 365
L + G+ TF S + C + LQ+H IV G +G++L+ +
Sbjct: 507 LHEMQILGLKPSEITFASLIDVCKG--SAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGM 564
Query: 366 YARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
Y + A LF K +V W+ LI G ++ + +A L+R+M ++N +Q
Sbjct: 565 YMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQAT 624
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK-FM 483
+VL+ C+ L+SL G+++H+ GF+ +++T ++L+DMY KCG++ + +F+
Sbjct: 625 FVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELA 684
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
++DV+SW +IVG +NG AK A+ F EM QS + P+++TFLGVL+AC HAG V E
Sbjct: 685 TKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGR 744
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
IF M YG+EP ++HY CMVDLLG+ G +AE+ I ++ +P+ IWA++L AC
Sbjct: 745 QIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRI 804
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG-KKLGEKKAGMS 662
H + K A++L+ P+ S YV+LSN+YA G WD +R+ KK +K G S
Sbjct: 805 HGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCS 864
Query: 663 WIEV 666
WI V
Sbjct: 865 WIVV 868
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 169/662 (25%), Positives = 282/662 (42%), Gaps = 92/662 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++ G+++H +IK GL F L+ +YA SL A +F ++
Sbjct: 54 LSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHL 113
Query: 70 --VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
VSWT +++ Y P+ A+ +++ M S P+ VL A G LD +
Sbjct: 114 HTVSWTALISGYVQAGLPHEALHIFDKM--RNSAVPDQVALVTVLNAYISLGKLDDACQL 171
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWA--------ASAYGNVAL 177
+++ + V N ++ + K L F Q S AS +A
Sbjct: 172 FQQMPIPI--RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIAS 229
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ L+ G VHA +K+GFE +SLI+MY KC DD +F+ + +++++ W
Sbjct: 230 L-AALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNA 288
Query: 238 II-------------------------------------VGCFE---------------- 244
++ CFE
Sbjct: 289 MLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKR 348
Query: 245 --CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ F +AL+DMY+ L EA K F+ + Y + WN++I GYV E
Sbjct: 349 FTSNLFVNNALIDMYAKAGALKEAGKHFEHMT------YRDHISWNAIIVGYVQEEVEAG 402
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A +L + G+ D + S L AC N+ + Q H L V G E + GS+L
Sbjct: 403 AFSLFRRMILDGIVPDEVSLASILSACGNIKVLEA--GQQFHCLSVKLGLETNLFAGSSL 460
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC----TKHGLNSLAYLLFRDMINSNQ 418
ID+Y++ G++K A + + +P++ VV+ + LI G TK +N L +M
Sbjct: 461 IDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESIN-----LLHEMQILGL 515
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-KEDITLTSLIDMYLKCGEIDDGL 477
++ +S++ VC A + G Q+H VKRG + TSL+ MY+ + D
Sbjct: 516 KPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADAN 575
Query: 478 ALF-KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF +F + +V WT +I G QN + A+ ++EM + + P++ TF+ VL AC
Sbjct: 576 ILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALL 635
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
+ + I S+ G + +VD+ + G + Q+ E+ K D W S
Sbjct: 636 SSLHDGREIH-SLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNS 694
Query: 597 ML 598
M+
Sbjct: 695 MI 696
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 240/532 (45%), Gaps = 76/532 (14%)
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
+W T + S++R ++ Y + G P+ F ++ L AC+ +L LGR +H
Sbjct: 17 NWRVQGTKHYSSER---VLQFYASFMNSGH-SPDQFTFAVTLSACAKLQNLHLGRAVHSC 72
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ- 187
+ + LE + L+ +Y KC SLT R +F A + + W +++SG Q
Sbjct: 73 VIKSGLESTSFCQGALIHLYAKCNSLTCARTIFAS----APFPHLHTVSWTALISGYVQA 128
Query: 188 ------VHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFM--PERDVVSWTGI 238
+H F R D V L ++++ Y+ G++DD LF M P R+VV+W +
Sbjct: 129 GLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVM 188
Query: 239 IVGCFECSCF------------------------TLSALVDMYS-NCNVLCEARKLFDQY 273
I G + + + LSA+ + + N +L A + +
Sbjct: 189 ISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGF 248
Query: 274 SS--WAASA----YG------------------NVALWNSMISGYVLNEQNEEAITLLSH 309
S + AS+ YG N+ +WN+M+ Y N + L
Sbjct: 249 ESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLD 308
Query: 310 IHSSGMCIDSYTFTSALK--ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ S G+ D +T+TS L AC L Q+H I+ + + V + LID+YA
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGR----QLHSAIIKKRFTSNLFVNNALIDMYA 364
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G +K A + F + +D ++W+ +I+G + + + A+ LFR MI ++ ++S
Sbjct: 365 KAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLAS 424
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C + L G+Q H VK G E +SLIDMY KCG+I D + MPER
Sbjct: 425 ILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS 484
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
VVS +I G KE+I EM LKP+EITF ++ C+ + V
Sbjct: 485 VVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKV 535
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 255/525 (48%), Gaps = 37/525 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G+ LH IIK + ++F N L+ MYA +L +A K F+ M ++
Sbjct: 325 LSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDH 384
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW ++ Y + A L+ M+ G V P+ +++L AC L+ G+ H
Sbjct: 385 ISWNAIIVGYVQEEVEAGAFSLFRRMILDGIV-PDEVSLASILSACGNIKVLEAGQQFHC 443
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ LE + ++L+DMY KCG + D + +++ +V N++++G
Sbjct: 444 LSVKLGLETNLFAGSSLIDMYSKCGDIK----DAHKTYSSMPERSVVSVNALIAGYALKN 499
Query: 185 GKQ----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
K+ +H + G + ++T SLID+ ++ GL + + +R G++
Sbjct: 500 TKESINLLHEMQI-LGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKR------GLLC 552
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G S F ++L+ MY + L +A LF ++SS + + +W ++ISG++ NE +
Sbjct: 553 G----SEFLGTSLLGMYMDSQRLADANILFSEFSSLKS-----IVMWTALISGHIQNECS 603
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+ A+ L + + + D TF + L+AC L + + ++H LI +G++LD + S
Sbjct: 604 DVALNLYREMRDNNISPDQATFVTVLQACALLSSLHD--GREIHSLIFHTGFDLDELTSS 661
Query: 361 NLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
L+D+YA+ G+VKS++++F L KKDV++W+ +I+G K+G A +F +M S
Sbjct: 662 ALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCIT 721
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ VL CS + G+Q+ V G E ++D+ + G + +
Sbjct: 722 PDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEE 781
Query: 479 LF-KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
K E + + W ++ C +G K +++I+ L+P
Sbjct: 782 FIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE--LEPQ 824
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V W+ + G TKH + + +NS +QF + L C+ L +L G+ VH+
Sbjct: 13 VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF--MPERDVVSWTGIIVGCGQNGRA 504
+K G E +LI +Y KC + +F P VSWT +I G Q G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
EA+ F +M S + P+++ + VL+A G +++A +F M
Sbjct: 132 HEALHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDDACQLFQQM 175
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 23/256 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V L+ C S+ G+ +H I G D T + L+ MYA + + ++F
Sbjct: 621 DQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVF 680
Query: 62 DEMA-RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
+E+A +K+++SW +M+ + N A+++++ M + + P+ + VL ACS +G
Sbjct: 681 EELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQ-SCITPDDVTFLGVLTACSHAGW 739
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+ GR I + + +E ++D+ + G L + D+ N +
Sbjct: 740 VYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKL-----EVEPNAMI 794
Query: 178 WNSMLSGGKQVHA------FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMP 228
W ++L G ++H K+ E E + + + +MY G D+ +L M
Sbjct: 795 WANLL-GACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMI 853
Query: 229 ERDVVSWTG---IIVG 241
++D+ G I+VG
Sbjct: 854 KKDIQKIPGCSWIVVG 869
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 353/670 (52%), Gaps = 38/670 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H R+++ G ++Q D F N LL++YA L A +LFD M +
Sbjct: 54 LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPER 113
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VS+ T+V Y A L+ + G E N F+ + +LK L I
Sbjct: 114 NMVSFVTLVQGYALRGGFEEAAGLFRRLQREGH-EVNHFVLTTILKVLVAMDAPGLTCCI 172
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGG 185
H + + + + ++L+D Y CG+++ R +FD + + W +M+S
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFD------GIIWKDAVTWTAMVS-- 224
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
C ED L + M + G + L + + +S + G C
Sbjct: 225 ------CYSENDIPED-ALNTFSKMRMA-GAKPNPFVLTSVLKAAVCLSSAVLGKGIHGC 276
Query: 246 SCFTL--------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ TL AL+DMY+ C + +AR +F+ + +V LW+ +IS Y +
Sbjct: 277 AVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIP------HDDVILWSFLISRYAQS 330
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
QNE+A + + S + + ++ + L+AC N+ + Q+H L++ GYE +
Sbjct: 331 YQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLD--LGQQIHNLVIKLGYESELF 388
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VG+ L+D+YA+ N++++LE+F L + V+W+ +I+G + G A +F++M ++
Sbjct: 389 VGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAH 448
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
Q SSVL+ C+ AS++ Q+H+ K F + I SLID Y KCG I D L
Sbjct: 449 VLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDAL 508
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F+ + + DVVSW II G +GRA +A+ F M +S KPN++TF+ +LS C G
Sbjct: 509 KVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTG 568
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV + ++F SM ++ ++P ++HY C+V LLG+AG +DA + I ++P P +W ++
Sbjct: 569 LVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRAL 628
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L +C H N L AE++L P+D + YV+LSN+YA G+ D ++ +RK+ + +G K
Sbjct: 629 LSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVK 688
Query: 658 K-AGMSWIEV 666
K G+SW+E+
Sbjct: 689 KEVGLSWVEI 698
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 212/670 (31%), Positives = 336/670 (50%), Gaps = 82/670 (12%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E L+HC + K +HC IIK + +IF NNL+S YA F + A ++FD+M ++
Sbjct: 20 ELLKHC------RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR 73
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+ SW T++++Y+ L+ ++ R+
Sbjct: 74 NLYSWNTLLSSYSK-----------------------------------LACLPEMERVF 98
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRK-------LFDQYSNWAASAYGNVALWNS 180
H TR D V N+L+ Y G L + L++ N A + + S
Sbjct: 99 HAMPTR-----DMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILAS 153
Query: 181 M---LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ G QVH VK GF+ + L+DMY K G + F+ MPE++VV +
Sbjct: 154 KQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNT 213
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLF-DQYSSWAASAYGNVALWNSMISGYVL 296
+I G CS + ++R+LF D + S W +MI+G+
Sbjct: 214 LIAGLMRCS---------------RIEDSRQLFYDMQEKDSIS-------WTAMIAGFTQ 251
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N + EAI L + + +D YTF S L AC ++ QVH I+ + Y+ +
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQE--GKQVHAYIIRTDYQDNI 309
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VGS L+D+Y + ++KSA +F ++ K+VV+W+ +++G ++G + A +F DM N+
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + F + SV+ C+ LASL G Q H + G +L+ +Y KCG I+D
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF M D VSWT ++ G Q G+A E + F+ M+ KP+++TF+GVLSAC A
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV++ IF SM E+ + P +HY CM+DL +AG ++A + I +MPF PD WAS
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L +C H N ++ AE LL P + + Y++LS++YA G W+ ++ +RK + G
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
Query: 656 EKKAGMSWIE 665
K+ G SWI+
Sbjct: 610 RKEPGCSWIK 619
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 31/302 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG ++++GK +H II+ +IF G+ L+ MY S+ A +
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M KN+VSWT M+ Y N A++++ M G +EP+ F +V+ +C+
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG-IEPDDFTLGSVISSCANLAS 390
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L+ G H R L + N L+ +Y KCGS+ D + ++ +Y + W +
Sbjct: 391 LEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIE----DSHRLFSEMSYVDEVSWTA 446
Query: 181 MLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PER 230
++SG Q + + GF+ + VT ++ + G + G +F M E
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
++ I + C ++D++S L EARK ++ ++ A G W S+
Sbjct: 507 RIIP----IEDHYTC-------MIDLFSRAGRLEEARKFINKM-PFSPDAIG----WASL 550
Query: 291 IS 292
+S
Sbjct: 551 LS 552
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 235/760 (30%), Positives = 350/760 (46%), Gaps = 109/760 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V LR G R + QG+ +H RI+ GL +++ GN+LL +Y SL D ++F +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ SWTT++TAYT + + AI +++ M + G V + + AVLKAC+ GDL GR
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEG-VRCDAVTFLAVLKACARLGDLSQGR 148
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYS----NWAASAYGN----- 174
IH I L+ +VL N LL +Y CG + LF++ +W A+ N
Sbjct: 149 SIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDLVSWNAAIAANAQSGD 208
Query: 175 ----VALWNSM---------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ M + + +H + G E+ V T+L
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALAS 268
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSW---------------------------------- 235
Y + G + +F+ ERDVVSW
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 236 -----TG--------IIVGC-----FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
TG +I GC + +AL+DMY+ C EAR LF + A
Sbjct: 329 LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNA 388
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
S WN+MI+G Q + A+ L + GM T+ + L+A + N
Sbjct: 389 VS-------WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVAS--NPEE 439
Query: 338 RFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP---KKDVVAW 390
A+ ++H IV+ GY + +G+ ++ +YA G + A F R + DVV+W
Sbjct: 440 ARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSW 499
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I ++HG A FR M NQ +VL C+ A+L G+ VH
Sbjct: 500 NAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRH 559
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
G E T+L MY +CG ++ +F K ERDVV + +I QNG A EA+
Sbjct: 560 SGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALK 619
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F M Q +P+E +F+ VLSAC H GL +E W IF SM+ YG+ P +HY C VD+L
Sbjct: 620 LFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVL 679
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG DAE+LI M KP +W ++L AC + + + + P D S YV
Sbjct: 680 GRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYV 739
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+LSN+ A G WD ++VR + G K+AG SWIE+ S
Sbjct: 740 VLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKS 779
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 302/601 (50%), Gaps = 95/601 (15%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY 164
++ +L+ C+ L+ GR +H I + ++ + L NTLL MY KCGSLT R++FD
Sbjct: 98 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGI 157
Query: 165 SN-----WAA--SAY--GN------------------------VALWNS-----MLSGGK 186
+ W A A+ GN V+L N+ +L G+
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+VH K G E E TSL+ MY KCG+I +F+ +PE++VV+WT +I G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAG----- 272
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
Y Q + A+ L
Sbjct: 273 -----------------------------------------------YAQQGQVDVALEL 285
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L + + + + T+TS L+ C L +VH I+ SGY + V + LI +Y
Sbjct: 286 LEKMQQAEVAPNKITYTSILQGCTTPLALE--HGKKVHRYIIQSGYGREIWVVNALITMY 343
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G +K A +LF LP +DVV W+ ++ G + G + A LFR M ++ +
Sbjct: 344 CKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFT 403
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S L CS A L+ GK +H V G+ + ++L+ MY KCG +DD +F M ER
Sbjct: 404 SALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER 463
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+VV+WT +I GC Q+GR +EA+ YF++M + +KP+++TF VLSAC H GLVEE F
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHF 523
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
SM +YG++P +EHY C VDLLG+AG ++AE +I MPF+P ++W ++L AC H++
Sbjct: 524 RSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSD 583
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ AE +L P+D YV LSN+YA G ++ KVR+ +K K+ G SWIE
Sbjct: 584 VERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 643
Query: 666 V 666
V
Sbjct: 644 V 644
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 152/586 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + RS++QG+ +H I+K G+ + + N LLSMYA SL DA ++FD + +NI
Sbjct: 103 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNI 162
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M+ A+ + + A + Y M + +P+ + ++L A + L +G+ +H
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETM-KLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQY------------SNWAASAYGNV 175
I + LE + + +L+ MY KCG +++ +FD+ + +A +V
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281
Query: 176 AL-----------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLID 209
AL + S+L G GK+VH + ++ G+ +E + +LI
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------------- 244
MY KCG + + LF +P RDVV+WT ++ G +
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401
Query: 245 -----CSCFTLSAL----------------VDMY---------SNCNVLCEARKLFDQYS 274
SC + + L +D+Y + C + +AR +F+Q S
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
NV W +MI+G + + EA+ + G+ D TFTS L AC ++
Sbjct: 462 ER------NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHV-- 513
Query: 335 FNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDV 387
L G LDY + S +DL R G+++ A + +P +
Sbjct: 514 -----GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGP 568
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
W L+ C I+S+ + + +VLK+
Sbjct: 569 SVWGALLSACR---------------IHSDVERGERAAENVLKLDP-------------- 599
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+D +L ++Y G +D + + M +RDVV G
Sbjct: 600 -------DDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPG 638
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 35/351 (9%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EA+ +L+ + G + S F L+ C L + +VH I+ SG + + + +
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ--GREVHAAILKSGIQPNRYLEN 135
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ +YA+ G++ A +F + +++V+W+ +I N AY + M +
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++ S+L + L+ G++VH K G E E TSL+ MY KCG+I +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR------ 534
+PE++VV+WT +I G Q G+ A+ ++M Q+ + PN+IT+ +L C
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 535 ----------HAGLVEEAWTI------------FTSMKPEYGLEPHLE--HYYCMVDLLG 570
+G E W + + +G PH + + MV
Sbjct: 316 HGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYA 375
Query: 571 QAGCFDDAEQLIAEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
Q G D+A L M KPDK + S L +C + + I +QL+
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV 426
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 27/245 (11%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++GKS+H +++ G S D++ + L+SMYA S++DA +F++M+ +N
Sbjct: 405 ALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN 464
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+WT M+T + R A+ + M + G ++P+ +++VL AC+ G ++ GR
Sbjct: 465 VVAWTAMITGCAQHGRCREALEYFEQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGR--- 520
Query: 129 ERITREKLEYDTVLM----NTLLDMYVKCGSLTRKLFDQYSN--WAASAYGNVALWNSML 182
+ L+Y M + +D+ + G L ++ N ++W ++L
Sbjct: 521 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL-----EEAENVILTMPFQPGPSVWGALL 575
Query: 183 SGGKQVHAFCVKRGFE----------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
S + +H+ V+RG +D +L ++Y G +D + M +RDV
Sbjct: 576 SACR-IHSD-VERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDV 633
Query: 233 VSWTG 237
V G
Sbjct: 634 VKEPG 638
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 371 NVKSALEL------FHRLP------KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
NV +A EL +LP K D +A SG + K G A + MI
Sbjct: 33 NVDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGT 92
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
V + +L+ C+ L SL +G++VHA +K G + +L+ MY KCG + D
Sbjct: 93 RVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARR 152
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + +R++VSWT +I + EA ++ M + KP+++TF+ +L+A + L
Sbjct: 153 VFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 212
Query: 539 VEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
++ + + K LEP + +V + + G A+ + ++P K
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFDKLPEK 261
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 227/716 (31%), Positives = 362/716 (50%), Gaps = 90/716 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHK 59
M+L +V L+ ++++G+ LH +K G L+ + N LL +Y+ +L DA
Sbjct: 1 MELHGLVRTLQ---SWSTLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASH 57
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LFDEM + N SW T+V A+ ++ + A+ L+N M F ++ V+ A + SG
Sbjct: 58 LFDEMPQTNSFSWNTLVQAHLNSGHTHSALHLFNAM-----PHKTHFSWNMVVSAFAKSG 112
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF---------------DQY 164
L L + + + + ++ N+++ Y + G + LF D +
Sbjct: 113 HLQLAHSLFNAMPSK----NHLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAF 168
Query: 165 SNWAASAYGNVALWNSM-LSGGKQVHA--FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
A+A G A +S+ L+ GKQVHA F G E + V +SLI++Y KCG++D
Sbjct: 169 V--LATALGACA--DSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAA 224
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ +F+ RDV F+LSAL+ Y+N + EAR +FD A
Sbjct: 225 RIVSFV--RDVDE-------------FSLSALISGYANAGRMREARSVFDSKVDPCA--- 266
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
LWNS+ISGYV N + EA+ L S + +G+ D+ + L A LL
Sbjct: 267 ---VLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAASGLLVV--ELVK 321
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARL-------------------------------G 370
Q+H +G D +V S+L+D Y++ G
Sbjct: 322 QMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCG 381
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ A +F+ +P K +++W+ +++G T++ S A +F M + +++F +SV+
Sbjct: 382 RIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVIS 441
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+C +SL G+QV + G E + I TSL+D Y KCG ++ G +F M + D VS
Sbjct: 442 ACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVS 501
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +++G NG EA+ F EM + P+ ITF GVLSAC H+GLVEE +F +MK
Sbjct: 502 WNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMK 561
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
Y + P +EH+ CMVDL +AG F++A LI EMPF+ D +W S+L+ C H N +
Sbjct: 562 HSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHGNKTIG 621
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
+ AEQ++ PE+ Y+ LSN+ A+ G W+ + VR+ + K +K G SW +
Sbjct: 622 KMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVRELMRDKHFQKIPGCSWAD 677
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 348/671 (51%), Gaps = 43/671 (6%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
+ C + G +HC +K G+ ++ F G+++L+MYA + DA ++F+ M +
Sbjct: 66 KACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVG 125
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
W M+ Y ++++ + +++Y + + F + LK C + G+L+ GR IH
Sbjct: 126 CWNAMIGGYAQCSYGFESLKIVS-VMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGL 184
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
I + ++ + T +MN+L+DMY K G K+FD+ + ++ WN++ +G
Sbjct: 185 IIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQD------KDIISWNTVFAGLSQG 238
Query: 185 --GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF--MPERDVVSWTG 237
+++ F K G + VT + L CGE D ++ F + R +S
Sbjct: 239 DDAREIGRFFHKLMLTGLKPNCVTFSILFRF---CGEALDLVSGLQFHCLAFRFGISDEA 295
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ S+L++M+S C + A +FD ++ + ++ N MISGY LN
Sbjct: 296 SVT----------SSLINMFSRCGAMRMACLVFD------SAPFKSIHTCNEMISGYNLN 339
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
N EA+ L +++ G+ D TF+SAL+AC N + Q+HG IV SG+
Sbjct: 340 CHNAEALNLFCNLNGLGLEADECTFSSALEACFR--TENQKLGRQMHGTIVKSGFASQGY 397
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V S+L+ Y G + + E F+ + + D+V+W +I G +S A L + +
Sbjct: 398 VCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAG 457
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
++FI S+ C+ +A+ R+ K VH+ VK G+E +++ID Y KCG+I++
Sbjct: 458 GKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENAR 517
Query: 478 ALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F RDV+ + +++ +G +EA+ F++M + L+P++ TF+ V+SAC H
Sbjct: 518 RVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHL 577
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLVE+ F SM +YG++P ++Y C+VDL + G +DA+ +I MPF P IW S
Sbjct: 578 GLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRS 637
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L C H N +L A++LL PE+ + YV+LS VY+ G W +KVRK + G
Sbjct: 638 LLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGL 697
Query: 657 -KKAGMSWIEV 666
K G SWIE+
Sbjct: 698 WKDPGCSWIEI 708
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 219/551 (39%), Gaps = 110/551 (19%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + AL+ C ++ G+ +H II+ + N+L+ MY A K+
Sbjct: 157 MDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKV 216
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + K+I+SW T+ + R + H L ++PN +S + + C + D
Sbjct: 217 FDRLQDKDIISWNTVFAGLSQGDDAREIGRFF-HKLMLTGLKPNCVTFSILFRFCGEALD 275
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALW 178
L G H R + + + ++L++M+ +CG++ +FD ++ + ++
Sbjct: 276 LVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFD------SAPFKSIHTC 329
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N M+SG G+Q+H VK
Sbjct: 330 NEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVK 389
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
GF + +SL+ Y+ G +DD FN + D+VSW +I SALV
Sbjct: 390 SGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMI-----------SALV 438
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
YSS EAI LL+ + +G
Sbjct: 439 H---------------KGYSS--------------------------EAIGLLNRLKEAG 457
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
D + F S C + + R VH L+V GYE V S +ID YA+ G++++
Sbjct: 458 GKPDEFIFGSIFNCCAGIAAY--RQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIEN 515
Query: 375 ALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A +F + + +DV+ ++ ++M HGL A F M + + +Q SV+ CS
Sbjct: 516 ARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACS 575
Query: 434 CLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-W 491
L + +G + + G + L+D++ + G ++D + + MP + W
Sbjct: 576 HLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIW 635
Query: 492 TGIIVGCGQNG 502
++ GC +G
Sbjct: 636 RSLLNGCRIHG 646
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 57/336 (16%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + + K G+ +H I+K G + + ++LL Y F L+D+ + F+ + R +
Sbjct: 367 ALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLD 426
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW M++A + AI L N + E G +P+ F++ ++ C+ + +H
Sbjct: 427 LVSWGAMISALVHKGYSSEAIGLLNRLKEAGG-KPDEFIFGSIFNCCAGIAAYRQTKSVH 485
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + E + + ++D Y KCG + R++FDQ S + +V L+N+M+
Sbjct: 486 SLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQ-----TSRFRDVILFNTMVMA-- 538
Query: 187 QVHAFCVKRG---FEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
H V+ FEK T S+I G ++ G F M +
Sbjct: 539 YAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDP 598
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD--QYSSWAASAYGNVALWNSMISG 293
+ GC LVD++S L +A+ + + + W A+W S+++G
Sbjct: 599 SPDNYGC----------LVDLFSRNGFLEDAKHIIETMPFPPWP-------AIWRSLLNG 641
Query: 294 -----------------YVLNEQNEEAITLLSHIHS 312
L +N+ A LLS ++S
Sbjct: 642 CRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYS 677
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + G + L++F +P K++V+W+ ++ G ++G + ++ +MI + N+F
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ V K C+ L G VH F +K G EK +S+++MY K G+I+D +F+ M
Sbjct: 61 LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
V W +I G Q E++ M + + TF+ L C G
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVG 173
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 217/691 (31%), Positives = 343/691 (49%), Gaps = 112/691 (16%)
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+N R + AI HM+ GS P+ YS LK C + D+G L+HE++T+ L+ D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 141 VLMNTLLDMYVKCGSL------------TRKLFD---QYSNWAASAYGNVALWN------ 179
V +N+L+ +Y KCG +R L S +A + G AL
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 180 --------------------SMLSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKC-GEI 217
+S G + F VK G+ + DV + LIDM++K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 218 DDGLALFNFMPERDVVSWT--------------------GIIVGCFECSCFTLSA----- 252
+F MPER+ V+WT +I+ +E FTLS
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 253 ------------------------------LVDMYSNCNV---LCEARKLFDQYSSWAAS 279
L++MY+ C+V +C ARK+FDQ
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH--- 338
Query: 280 AYGNVALWNSMISGYVLNE-QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
NV W +MI+GYV +EEA+ L + + + + +TF+S LKAC NL R
Sbjct: 339 ---NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAAL--R 393
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
QV V G+ V ++LI +YAR G + A + F L +K++++++ +I
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
K+ + A LF ++ + + F +S+L + + ++ +G+Q+HA +K G +
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+LI MY +CG I+ +F+ M +R+V+SWT II G ++G A +A+ F +M++
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PN +T++ VLSAC H GLV E W F SM E+G+ P +EHY CMVD+LG++G +A
Sbjct: 574 VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
Q I MP+K D +W + L AC H N +L A+ ++ P DP+ Y++LSN+YA+
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAST 693
Query: 639 GMWDSLSKVRKAGKKLGE-KKAGMSWIEVSS 668
WD +S +RKA K+ K+AG SW+EV +
Sbjct: 694 SKWDEVSNIRKAMKEKNLIKEAGCSWVEVEN 724
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 134/256 (52%), Gaps = 9/256 (3%)
Query: 291 ISGYVLNEQN----EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
++G ++ E N +AI+ L H+ G D T++ LK CI +F+ VH
Sbjct: 34 LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD--IGTLVHEK 91
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSL 405
+ S +LD + ++LI LY++ G + A +F + +D+++WS ++ + +
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLI 464
A L F DMI + N++ ++ + CS + G + F VK G+ + D+ + LI
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211
Query: 465 DMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
DM++K G++ +F+ MPER+ V+WT +I Q G A EAI F EMI S +P+
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDR 271
Query: 524 ITFLGVLSACRHAGLV 539
T GV+SAC + L+
Sbjct: 272 FTLSGVISACANMELL 287
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 336/671 (50%), Gaps = 65/671 (9%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
S+D+ + N +L+ Y + +A LF+ M +N VSWT M++ Y ++ A ++
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRT 213
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
ML G + P +VL A G + IH + + E D V+ +L+ Y K
Sbjct: 214 MLCEG-MTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-KRGFEKEDVTLTSLID 209
++ + AA N W+++++ G+ AF V +R K + TS++
Sbjct: 273 NMLDSAVKFFEGMAAR---NEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLT 329
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ G IDD LF+ + E +VVSW +I G Y ++ EA L
Sbjct: 330 GLARYGRIDDAKILFDQIHEPNVVSWNAMITG---------------YMQNEMVDEAEDL 374
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F++ + N W MI+GY N ++E+A+ L +H GM + TS+ AC
Sbjct: 375 FNRM------PFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFAC 428
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL------- 382
N+ + QVH L V +G + + V + LI LY + ++ S ++F R+
Sbjct: 429 SNIEALET--GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 383 ------------------------PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
P DVV+W+ +I C + + A +FR M++ +
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N I++ +L + L + + G+Q+H +K G + + +L+ MY KC D L
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLK 605
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M ERD+ +W II G Q+G +EAI +Q M+ + + PNE+TF+G+L AC H+GL
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E F SM +YGL P LEHY CMVDLLG+AG AE I +MP +PD IW+++L
Sbjct: 666 VDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALL 725
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC+ H N ++ AE+L + P + YVMLSN+Y++ GMWD ++KVRK K+ G K
Sbjct: 726 GACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNK 785
Query: 658 KAGMSWIEVSS 668
G SW+++ +
Sbjct: 786 DPGCSWMQIKN 796
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 138/640 (21%), Positives = 244/640 (38%), Gaps = 146/640 (22%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
L++A ++FD M ++I++W +M+ AY +N P+ A R + G++ + S +
Sbjct: 49 LHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPD-AGRSLADAISGGNLRTGTILLSGYAR 107
Query: 114 ACSLSGDLDLGRLIHERITREKLEY-DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAAS 170
A GR+ R + + +TV N ++ YV+ G +T RKLFD A
Sbjct: 108 A---------GRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFD------AM 152
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+V+ WN+ML+G Y +++ LF MPER
Sbjct: 153 PSRDVSSWNTMLTG--------------------------YCHSQLMEEARNLFERMPER 186
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ VSWT +I G
Sbjct: 187 NGVSWTVMISG------------------------------------------------- 197
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
YVL EQ+ A + + GM + S L A +L +H L+ +
Sbjct: 198 ---YVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHL--GKPGILESIHVLVHKT 252
Query: 351 GYELDYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G+E D +VG+ +++ Y + N + SA++ F + ++ WS +I ++ G A+ +
Sbjct: 253 GFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAV 312
Query: 410 F-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH--AFCVKRGFEKEDITLTSLIDM 466
+ RD + SV S L L R ++ + E ++ ++I
Sbjct: 313 YQRDPLK-----------SVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITG 361
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM------------ 514
Y++ +D+ LF MP R+ +SW G+I G +NGR+++A+ Q +
Sbjct: 362 YMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSL 421
Query: 515 ---------IQSRLKPNEITFLGVLSACRHAGLVEEAW-TIFTSMKPEYGLEPHLEH--- 561
I++ ++ L V + C+ V A T++ + + +
Sbjct: 422 TSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTV 481
Query: 562 -----YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC-ETHNNTKLVSIIAE 615
Y + L Q FD+A + MP PD W +++ AC + + V I
Sbjct: 482 KDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISACAQADQGNEAVEIFRS 540
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
L +P +L + LG ++ KLG
Sbjct: 541 MLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLG 580
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 78/405 (19%)
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVG-CFECSCFTLSALVDMYSNCNV--------- 262
+ G + + +F+ MP RD+++W +I C +L D S N+
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 263 ------LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+ +AR++FD N WN+M++ YV N ITL + +
Sbjct: 105 YARAGRVRDARRVFD------GMGVRNTVAWNAMVTCYVQNGD----ITLARKLFDAMPS 154
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D ++ + L +GY +++L ++ A
Sbjct: 155 RDVSSWNTML-----------------------TGY------------CHSQL--MEEAR 177
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF R+P+++ V+W+ +I G + A+ +FR M+ Q + SVL L
Sbjct: 178 NLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLG 237
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK-CGEIDDGLALFKFMPERDVVSWTGII 495
+ +H K GFE++ + T++++ Y K +D + F+ M R+ +W+ II
Sbjct: 238 KPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTII 297
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLK--PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
Q GR +A A +Q + LK P+ + L L+ G +++A +F +
Sbjct: 298 AALSQAGRIDDAFAVYQ---RDPLKSVPSRTSMLTGLA---RYGRIDDAKILFDQIH--- 348
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
EP++ + M+ Q D+AE L MPF+ + WA M+
Sbjct: 349 --EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMI 390
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 48/256 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN---- 68
C +++ GK +H +K G + + N L+++Y + S+ ++FD M K+
Sbjct: 428 CSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSY 487
Query: 69 ---------------------------IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
+VSWTT+++A + N A+ ++ ML +
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-TRKL 160
PN + + +L G LG+ IH + ++ V+ N L+ MY KC S + K+
Sbjct: 548 -PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKV 606
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMY 211
FD ++ WN++++G Q ++ V G +VT L+
Sbjct: 607 FDSMEE------RDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHAC 660
Query: 212 LKCGEIDDGLALFNFM 227
G +D+G F M
Sbjct: 661 SHSGLVDEGHQFFKSM 676
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 351/677 (51%), Gaps = 52/677 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-----LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
C + RS+ QG+ +H ++ L+ + N+L++MY + + A +FD M +
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N VSW ++ A+ N R A+ L++ ML G++ P+ F + + ACS GDL LGR +
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTM-PDQFALGSAICACSELGDLGLGRQV 170
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H + + + D ++ N L+ MY K GS+ D ++ + ++ W S+++G
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVG----DGFALFERIRDKDLISWGSIIAGLAQ 226
Query: 185 -GKQVHAFCVKRGFEKEDV------------TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
G+++ A + R E V S++ L+ GE G+++ + +R+
Sbjct: 227 QGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSV-KYQLDRN 285
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
S+ G CS L DMY+ CN L ARK+F + S ++ WNS+I
Sbjct: 286 --SYAG-------CS------LSDMYARCNELDSARKVFYRIES------PDLVSWNSLI 324
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+ + EA+ L S + SG+ D T + L AC+ + +H +V G
Sbjct: 325 NAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQ--GRSIHSYLVKLG 382
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
D IV ++L+ +YAR + SA+++FH +DVV W+ ++ C +H + LF
Sbjct: 383 LGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFS 442
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+ S +++ +++VL + L KQVHA+ K G + + LID Y KCG
Sbjct: 443 LLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCG 502
Query: 472 EIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
+DD LF+ M RDV SW+ +IVG Q G AKEA+ F M +KPN +TF+GVL
Sbjct: 503 SLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVL 562
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
+AC GLV+E ++ MKPEYG+ P EH C++DLL +AG +A + + +MPF+PD
Sbjct: 563 TACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPD 622
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W ++L A THN+ + AE +L P + YV+L N+YA+ G W+ ++++K
Sbjct: 623 IIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKD 682
Query: 651 GKKLG-EKKAGMSWIEV 666
+ G +K G SWI++
Sbjct: 683 MRSSGVQKSPGKSWIKL 699
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 227/747 (30%), Positives = 355/747 (47%), Gaps = 116/747 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +II +GL D + N L+++Y+ + A K+F++M +N+VSW+TMV+A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGDLDLGR----LIHERITREKLEYD 139
++ ++ PN ++ S+ ++ACS L G GR + + + + D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR---GRWMVFQLQSFLVKSGFDRD 182
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVALWNS------------ 180
+ L+D Y+K G++ R +FD W G V + S
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 181 ---------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
L GGKQ+HA ++ G E + + LID Y+KCG +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 220 GLALFNFMPERDVVSWTGIIVG-------------------------CFECS-----CFT 249
LFN MP ++++SWT ++ G + CS C +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 250 LSAL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L AL +DMY+ C+ L +ARK+FD + A +V
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF------AAADV 416
Query: 285 ALWNSMISGYV-LNEQNE--EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
L+N+MI GY L Q E EA+ + + + TF S L+A +L + +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG--LSK 474
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+HGL+ G LD GS LID+Y+ +K + +F + KD+V W+ + G +
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
N A LF ++ S + ++F ++++ LAS++ G++ H +KRG E
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DMY KCG +D F RDVV W +I +G K+A+ ++M+ ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N ITF+GVLSAC HAGLVE+ F M +G+EP EHY CMV LLG+AG + A +L
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I +MP KP +W S+L C N +L AE + + P+D + MLSN+YA+ GMW
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 642 DSLSKVRKAGKKLG-EKKAGMSWIEVS 667
KVR+ K G K+ G SWI ++
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 237/594 (39%), Gaps = 114/594 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK +H I++YGL D N L+ Y + AHKLF+ M KNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWTT+++ Y N A+ L+ M ++G ++P+ + S++L +C+ L G +H
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ L D+ + N+L+DMY KC LT RK+FD + A +V L+N+M+ G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF------AAADVVLFNAMIEGYSR 428
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
KQ+H K G +
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
++LID+Y C + D +F+ M +D+V W + G
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG------------------- 529
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
YV +NEEA+ L + S D +
Sbjct: 530 ---------------------------------YVQQSENEEALNLFLELQLSRERPDEF 556
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF + + A NL + + + H ++ G E + + + L+D+YA+ G+ + A + F
Sbjct: 557 TFANMVTAAGNLASV--QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+DVV W+ +I HG A + M++ + N VL CS +
Sbjct: 615 SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD-VVSWTGIIVGCG 499
G + ++ G E E ++ + + G ++ L + MP + + W ++ GC
Sbjct: 675 GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 500 QNGRAKEAIAYFQEMIQSRLKPN-EITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+ G + A + I S K + T L + A + G+ EA + MK E
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK--GMWTEAKKVRERMKVE 786
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 13/278 (4%)
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+A +LL++ + VHG I+ G ELD + + LI+LY+R G + A ++F ++P++
Sbjct: 53 LRASDDLLHYQN----VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER 108
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGK-- 442
++V+WS ++ C HG+ + ++F + + +D N++I+SS ++ CS L RG+
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWM 166
Query: 443 --QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
Q+ +F VK GF+++ T LID YLK G ID +F +PE+ V+WT +I GC +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
GR+ ++ F ++++ + P+ VLSAC +E I + YGLE
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI-LRYGLEMDAS 285
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++D + G A +L MP K + W ++L
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLL 322
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 30/300 (10%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L V LR S+ K +H + KYGL+ DIF G+ L+ +Y++ L D+ +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM K++V W +M Y A+ L+ L+ P+ F ++ ++ A +
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLE-LQLSRERPDEFTFANMVTAAGNLASVQ 572
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
LG+ H ++ + LE + + N LLDMY KCGS D + + ++A +V WNS++
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE----DAHKAFDSAASRDVVCWNSVI 628
Query: 183 SG------GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
S GK+ K G E +T ++ G ++DGL F M +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
T V +V + L +AR+L ++ + A+ +W S++SG
Sbjct: 689 PETEHYV-----------CMVSLLGRAGRLNKARELIEKMPTKPAA-----IVWRSLLSG 732
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 224/738 (30%), Positives = 345/738 (46%), Gaps = 105/738 (14%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H R + G D+F N LL Y+ + DA +LFD M KN+VSW + ++ + +
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 86 NWAIRLYNHMLEY-GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
A+ L+ G PN F+ ++ L+AC+ S + G+ +H R L+ + +
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 145 TLLDMYVKCGSLTRKL--FDQYS-----NWAA--SAY-----GNVAL--WNSM------- 181
L+++Y K G + + FD W A + Y G VAL + M
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 182 -----------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
L GG+Q H + + E + + +LID+Y KC + LF
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 225 NFMPERDVVSWTGIIVG-------------------------CFEC-----SCFTLSA-- 252
+ M R++VSWT +I G F C SC +L+A
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 253 -----------------------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
L+DMY+ C L EAR +F+ + A +Y N+
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISY------NA 387
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI GY AI + S + + TF S L ++ + Q+HGLIV
Sbjct: 388 MIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLG--VSSSQSAIELSKQIHGLIVK 445
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
SG LD GS+LID+Y++ V+ A +F+ + +D+V W+ +I G ++ A L
Sbjct: 446 SGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKL 505
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F + S N+F +++ V S L S+ G+Q HA +K G + + +LIDMY K
Sbjct: 506 FNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAK 565
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG I +G LF+ +DV+ W +I Q+G+A+EA+ F+ M + ++PN +TF+GV
Sbjct: 566 CGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGV 625
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC HAGLV+E F MK +Y +EP EHY +V+L G++G A++ I MP +P
Sbjct: 626 LSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEP 685
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
+W S+L AC N ++ E L P D V++SN+YA+ G+W K+R+
Sbjct: 686 AAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQ 745
Query: 650 AGKKLG-EKKAGMSWIEV 666
G K+ G SWIEV
Sbjct: 746 GMDCAGVVKEPGYSWIEV 763
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 200/523 (38%), Gaps = 124/523 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG +I QG+ +H IK L D + N+L+ MYA L +A +F+ +A +
Sbjct: 323 LNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDA 382
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+S+ M+ Y+ AI +++ M Y S++P+ + ++L S ++L + IH
Sbjct: 383 ISYNAMIEGYSRLGDLAGAIDVFSKM-RYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHG 441
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYG--------- 173
I + D ++L+D+Y K + + +F+ N W A +G
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501
Query: 174 NVALWNSM-LSG-----------------------GKQVHAFCVKRGFEKEDVTLTSLID 209
V L+N + +SG G+Q HA +K G + + +LID
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALID 561
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG I +G LF +DV+ W +I
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMI------------------------------ 591
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
S Y + Q EEA+ + + +G+ + TF L AC
Sbjct: 592 ----------------------STYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSAC 629
Query: 330 IN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+ L++ R F + G E Y +++++L+ R G + +A E R+P +
Sbjct: 630 AHAGLVDEGLRHFDFMKTKYAIEPGTE-HY---ASVVNLFGRSGKLHAAKEFIERMPIEP 685
Query: 387 VVA-WSGLIMGC-----TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
A W L+ C + G + L D +S V I + + S LR+
Sbjct: 686 AAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQ 745
Query: 441 G------------------KQVHAFCVKRGFEKEDITLTSLID 465
G K+VH F + E + SL+D
Sbjct: 746 GMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLD 788
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/765 (29%), Positives = 362/765 (47%), Gaps = 112/765 (14%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
RR+ L+ C ++QGK +H +I +S D +T +L MYA S ++ K+F
Sbjct: 32 RRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYR 91
Query: 64 MARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL---- 117
+ + +I W ++++++ N A+ Y ML +G V P+ + ++KAC
Sbjct: 92 LDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNF 150
Query: 118 -----------SGDLDLGRLIHERITREKLEY----------------DTVLMNTLLDMY 150
S +D + + + LEY D V+ N +L+ Y
Sbjct: 151 KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGY 210
Query: 151 VKCG---------SLTRKLFDQYSNWAASAYGNVALWNS--MLSGGKQVHAFCVKRGFEK 199
KCG SL R DQ S A + +++ S ++ G Q+H V G +
Sbjct: 211 AKCGASDSVIKGFSLMR--MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDF 268
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------ 241
E SL+ MY KCG DD + LF M D V+W +I G
Sbjct: 269 EGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMI 328
Query: 242 --------------------------CFECSCFTL-----------SALVDMYSNCNVLC 264
C + C+ + SAL+D Y C +
Sbjct: 329 SSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 388
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
A+K+F Q +S +V ++ +MISGY+ N N +A+ + + + + T S
Sbjct: 389 MAQKIFSQCNSV------DVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVS 442
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L LL + ++HG I+ G++ +G +ID+YA+ G + A E+F RL K
Sbjct: 443 ILPVIGGLLAL--KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
+D+V+W+ +I C + S A +FR M S + IS+ L C+ L S GK +
Sbjct: 501 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAI 560
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H F +K + + ++LIDMY KCG + + +F M E+++VSW II G +G+
Sbjct: 561 HGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKL 620
Query: 505 KEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
K+++ F EM++ S +P++ITFL ++S C H G V+E F SM +YG++P EHY
Sbjct: 621 KDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYA 680
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
C+VDL G+AG +A + + MPF PD +W ++L A H N +L + + +L+ P
Sbjct: 681 CVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPW 740
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ YV++SN +A G W+S++KVR K+ +K G SWIE++
Sbjct: 741 NSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEIN 785
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C S GK++H +IK+ L+ D+++ + L+ MYA +L A +F
Sbjct: 537 DCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVF 596
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KNIVSW +++ AY ++ + ++ L++ M+E P+ + ++ C GD+
Sbjct: 597 DTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDV 656
Query: 122 DLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
D G +T++ ++ ++D++ + G L+ + Y + + + +W
Sbjct: 657 DEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLS----EAYETVKSMPFPPDAGVWG 712
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
++L G ++H + E V + L+D+
Sbjct: 713 TLL-GASRLH-----KNVELAKVASSRLMDL 737
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 357/690 (51%), Gaps = 65/690 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ + + GK +H + K+G D T N L+++Y +K+FD ++ +N
Sbjct: 100 LKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 159
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LSGDLDLGR 125
VSW +++++ S ++ A+ + ML+ VEP+ F +V ACS + L +G+
Sbjct: 160 QVSWNSLISSLCSFEKWEMALEAFRCMLDE-DVEPSSFTLVSVALACSNFPMPEGLLMGK 218
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H R K E ++ ++NTL+ MY K G L ++ L + ++ WN++LS
Sbjct: 219 QVHAYGLR-KGELNSFIINTLVAMYGKMGKLASSKVLLGSFEG------RDLVTWNTVLS 271
Query: 184 GGKQVHAFC---------VKRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFNFMPE 229
Q F V G E + T++S++ L+ G+ AL N
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKN---- 327
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G + + F SALVDMY NC + ++FD + LWN+
Sbjct: 328 -----------GSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFD------RKIGLWNA 370
Query: 290 MISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY NE +EEA+ L + S+G+ +S T + AC+ F+ + A +HG +V
Sbjct: 371 MITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEA--IHGFVV 428
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G + D V + L+D+Y+RLG + A +F ++ +D+V W+ +I G + A L
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALL 488
Query: 409 LFRDMINSNQDV-----------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ M + N + ++L C+ L++L +GK++HA+ +K +
Sbjct: 489 MLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 548
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG + +F +P R+V++W I++ G +G +++AI + M+
Sbjct: 549 AVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQ 608
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+TF+ V +AC H+G+V E IF +MK +YG+EP +HY C+VDLLG+AG +
Sbjct: 609 GVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKE 668
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A QLI +P DK W+S+L AC HNN ++ I A+ L+ P S YV+L+N+Y+
Sbjct: 669 AYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 728
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ G+W ++VR+ K G K+ G SWIE
Sbjct: 729 SAGLWYKATEVRRNMKAQGVRKEPGCSWIE 758
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 61/446 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I L C ++ GK LH +K G L ++ F G+ L+ MY + + ++FD M
Sbjct: 301 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM 360
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ I W M+T Y N+ A+ L+ M E + N + V+ AC SG
Sbjct: 361 FDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK 420
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
IH + + L+ D + N L+DMY + G + +++F + + ++ WN+++
Sbjct: 421 EAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMED------RDLVTWNTII 474
Query: 183 SG--------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+G ++ + + +TL +++ + G
Sbjct: 475 TGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE 534
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + ++ T + VG SALVDMY+ C L +RK+FDQ
Sbjct: 535 IHAYAIKNNLA--TDVAVG---------SALVDMYAKCGCLQMSRKVFDQI------PIR 577
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WN ++ Y ++ +++AI +L + G+ + TF S AC S +
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAAC-------SHSGMV 630
Query: 343 VHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKK--DVVAWSGLI 394
GL + + DY V + ++DL R G VK A +L + +P+ AWS L+
Sbjct: 631 NEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV 420
C H + + +++I +V
Sbjct: 691 GACRIHNNLEIGEIAAQNLIQLEPNV 716
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W L+ + L A L + DMI + F ++LK + L + GKQ+HA
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 450 KRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
K G+ + +T+ +L+++Y KCG+ +F + ER+ VSW +I + + A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
F+ M+ ++P+ T + V AC + + E
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPE 212
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 212/708 (29%), Positives = 332/708 (46%), Gaps = 96/708 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D R V+ + C + R GK + II+ G +I+ N L+ +Y+ ++ +A ++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + K +V+W ++ Y A L+ M++ G +EP+ + +VL ACS
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEG-LEPSIITFLSVLDACSSPAG 173
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASA 171
L+ G+ +H ++ D + L+ MYVK GS+ R++FD N
Sbjct: 174 LNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGG 233
Query: 172 YGNVALWN----------------------SMLSG---------GKQVHAFCVKRGFEKE 200
Y W S+L G GK VHA C+ G +
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TSLI MY CG I+ +F+ M RDVVSWT +I G
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEG------------------- 334
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
Y N E+A L + + G+ D
Sbjct: 335 ---------------------------------YAENGNIEDAFGLFATMQEEGIQPDRI 361
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T+ + AC N N A ++H + +G+ D +V + L+ +YA+ G +K A ++F
Sbjct: 362 TYMHIMNACAISANLNH--AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFD 419
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+P++DVV+WS +I ++G + A+ F M SN + + ++L C L +L
Sbjct: 420 AMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDV 479
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G +++ +K +LI M K G ++ +F M RDV++W +I G
Sbjct: 480 GMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSL 539
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G A+EA+ F M++ R +PN +TF+GVLSAC AG V+E FT + G+ P ++
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVK 599
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
Y CMVDLLG+AG D+AE LI MP KP +IW+S+L AC H N + AE+ L
Sbjct: 600 LYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMI 659
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
P D + YV LS++YA GMW++++KVRK + G K+ G +WIEV+
Sbjct: 660 DPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVA 707
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 166/373 (44%), Gaps = 46/373 (12%)
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+L + G IDS T+ + C L + + QV I+ G +L+ + LI L
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRD--AALGKQVRDHIIQGGRQLNIYELNTLIKL 101
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y+ GNV A ++F + K VV W+ LI G + G A+ LFR M++ + +
Sbjct: 102 YSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITF 161
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SVL CS A L GK+VHA V GF + T+L+ MY+K G +DD +F +
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHI 221
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL--------------- 530
RDV ++ ++ G ++G ++A F M Q LKPN+I+FL +L
Sbjct: 222 RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 531 -SACRHAGLVEE-------------------AWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+ C +AGLV++ A +F +MK + + M++
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-----DVVSWTVMIEGYA 336
Query: 571 QAGCFDDAEQLIAEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQL-LATSPEDPS 626
+ G +DA L A M +PD+ + ++ AC N I Q+ +A D
Sbjct: 337 ENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396
Query: 627 KYVMLSNVYATLG 639
L ++YA G
Sbjct: 397 VSTALVHMYAKCG 409
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 326/672 (48%), Gaps = 82/672 (12%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M +N VSW T++ A + P A+ +Y ML+ G + P F ++VL AC LD
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEG-LAPTNFTLASVLSACGAVAALDD 59
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM 181
GR H + L+ + N LL MY KCGS+ +LFD + ++ A+ +
Sbjct: 60 GRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSF--TAMMGGL 117
Query: 182 LSGG------------------------------------------------KQVHAFCV 193
GG + +HA V
Sbjct: 118 AQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVV 177
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII-----VGCFECSCF 248
++GF + SL+D+Y K ++D+ + +F + +VSW +I +GC+E +
Sbjct: 178 RKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAME 237
Query: 249 TLSALVD--------MYSNCNVLC-------EARKLFDQYSSWAASAYGNVALWNSMISG 293
L + + YSN C AR +FD+ + V WN+++SG
Sbjct: 238 VLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPS------VTTWNTLLSG 291
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y E ++E I L + + D T L +C L NF QVH V
Sbjct: 292 YGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNF--ELGKQVHSASVRLLLH 349
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D V S LID+Y++ G V AL +F+ + ++DVV W+ +I G H L+ A+ + M
Sbjct: 350 NDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQM 409
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + +S++ +C+ L+S+ +G+Q+HA +K G+++ SLIDMY K G +
Sbjct: 410 RENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNM 469
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
DD F M +++V+W +I G QNG ++A+ F+ M+ ++ KP+ +TF+ VL+ C
Sbjct: 470 DDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 529
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+GLV+EA T F SM+ YG+ P +EHY C++D L +A F + E +I +MP+K D +
Sbjct: 530 SHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPIL 589
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W +L AC H+N +L A+ L P++PS YV+LSN+YATLG S VR
Sbjct: 590 WEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSS 649
Query: 654 LGEKKA-GMSWI 664
G K G SW+
Sbjct: 650 RGVVKGRGYSWV 661
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 216/503 (42%), Gaps = 91/503 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ G+ H +K GL F N LL MY S+ DA +LFD M
Sbjct: 44 LASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMP 103
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKAC--SLSGDLD 122
N VS+T M+ + A+RL+ M G V+P S+VL AC + +GD +
Sbjct: 104 SPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDP--VAVSSVLGACAQACAGDYN 161
Query: 123 LGRL------IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGN 174
+ R IH + R+ D + N+L+D+Y K + K+F+ S+ +
Sbjct: 162 VARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVS------ 215
Query: 175 VALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ WN +++G Q V F + GFE +VT ++++ +K ++ A+F+
Sbjct: 216 IVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFD 275
Query: 226 FMPERDVVSWTGIIVG-----------------------------------CFECSCFTL 250
+P+ V +W ++ G C F L
Sbjct: 276 KIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFEL 335
Query: 251 --------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
S L+D+YS C + A +F+ + +V WNSM
Sbjct: 336 GKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER------DVVCWNSM 389
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
ISG ++ +EEA L + +GM ++ S + C L + Q+H ++
Sbjct: 390 ISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQ--GRQMHAQVLKD 447
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GY+ + VG +LID+YA+ GN+ A F+ + K++VAW+ +I G ++G A LF
Sbjct: 448 GYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELF 507
Query: 411 RDMINSNQDVNQFIISSVLKVCS 433
M+ + Q + +VL CS
Sbjct: 508 EYMLTTKQKPDSVTFIAVLTGCS 530
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + SI QG+ +H +++K G Q+++ G +L+ MYA +++DA F+ M KN+V+W
Sbjct: 428 CARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAW 487
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M+ Y N A+ L+ +ML +P+ + AVL CS SG +D
Sbjct: 488 NEMIHGYAQNGFGEKAVELFEYMLTTKQ-KPDSVTFIAVLTGCSHSGLVD 536
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + + GK +H ++ L D+F + L+ +Y+ + A +F+ M +++
Sbjct: 324 LSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDV 383
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W +M++ + A M E G + P Y++++ C+ + GR +H
Sbjct: 384 VCWNSMISGLAIHSLSEEAFDFLKQMRENG-MFPTESSYASMINLCARLSSIPQGRQMHA 442
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL-TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ- 187
++ ++ + + + +L+DMY K G++ +LF + N+ WN M+ G Q
Sbjct: 443 QVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLF-----FNCMIVKNLVAWNEMIHGYAQN 497
Query: 188 --------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + + + VT +++ G +D+ + FN M
Sbjct: 498 GFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSM 545
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 330/639 (51%), Gaps = 47/639 (7%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY S+ DA +F + N VSWT +V A+ N A+ Y M+ G + P+G
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGA 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKL-EYDTVLMNTLLDMYVKCG--SLTRKLFDQ 163
M+ + CS S DL G+L+H I +L E+D +L L+ MY +C L RK FD+
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAFCV--------KRGFEKEDVTLTSLIDMY 211
+ WN++++G G A + G + + +T +S +
Sbjct: 120 MGK------KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
G+I G R++ + T + + +AL++MYS C L ARK+FD
Sbjct: 174 TVVGDISQG---------REIEART--VASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + +V WN+MISGY +A+ L + + + TF L AC N
Sbjct: 223 RLKNR------DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAW 390
L + A +H + GYE D ++G+ L+++Y + + ++ A ++F R+ +DV+ W
Sbjct: 277 LEDLEQGRA--IHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITW 334
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ LI+ ++G A +F+ M N N+ +S+VL C+ L + R+GK VHA +
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHAL-IA 393
Query: 451 RGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
G K D+ L SL++MY +CG +DD + +F + ++ +VSW+ +I Q+G ++ +
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLE 453
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
+F E++Q L +++T + LSAC H G+++E F SM ++GL P H+ CMVDLL
Sbjct: 454 HFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLL 513
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP-SKY 628
+AG + AE LI +MPF PD W S+L C+ HN+TK + +A++L ED S
Sbjct: 514 SRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTV 573
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVS 667
+LSNVYA G WD + K R ++ K G S+IE++
Sbjct: 574 TLLSNVYAEAGRWDDVRKTRN--RRAARKNPGCSYIEIN 610
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 241/533 (45%), Gaps = 72/533 (13%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V A+ C + +KQG+ LH I++ L + DI G L++MYA L A K FDEM
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS--VEPNGFMYSAVLKACSLSGDLDL 123
+K +V+W ++ Y+ N A+++Y M+ ++P+ +S+ L AC++ GD+
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
GR I R D+++ N L++MY KCGSL RK+FD+ N +V WN+M
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR------DVIAWNTM 235
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWTG 237
+SG Y K G L LF M P+ +VV++ G
Sbjct: 236 ISG--------------------------YAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 238 IIVGC--------------------FECSCFTLSALVDMYSNC-NVLCEARKLFDQYSSW 276
++ C +E + L++MY+ C + L EAR++F++ +
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR 329
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+V WN +I YV Q ++A+ + + + + T ++ L AC L
Sbjct: 330 ------DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVL--GA 381
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
R VH LI + + D ++ ++L+++Y R G++ + +F + K +V+WS LI
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV-KRGFEK 455
+HG + F +++ + + S L CS L+ G Q V G
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAP 501
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
+ ++D+ + G ++ L MP D V+WT ++ GC + K A
Sbjct: 502 DYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 224/742 (30%), Positives = 353/742 (47%), Gaps = 123/742 (16%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
K GL D +++ L+DA LF +M N+V+W M++ + AI
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAID 335
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+ +M + G V+ +VL A + L+ G L+H + ++ L + + ++L++MY
Sbjct: 336 FFKNMWKTG-VKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMY 394
Query: 151 VKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------------------ 184
KC + +K+FD A N+ LWN+ML G
Sbjct: 395 AKCEKMEAAKKVFD------ALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWP 448
Query: 185 --------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
G+Q+H+F +K FE +L+DMY KCG +++ F
Sbjct: 449 DEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF 508
Query: 225 NFMPERDVVSWTGIIVG------------------------------------------- 241
F+ RD VSW IIVG
Sbjct: 509 EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALE 568
Query: 242 ------CF------ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
CF + + S+L+DMY C + AR +F S + V N+
Sbjct: 569 QGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRS------VVSMNA 622
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
+I+GY N+ EAI L + + G+ TF S L AC N Q+H LI
Sbjct: 623 IIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLN--LGRQIHCLIQK 679
Query: 350 SG--YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
G Y+ D++ G +L+ +Y A LF K + W+ +I G T++G + A
Sbjct: 680 RGLLYDGDFL-GVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEA 738
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
L+++M +N +Q +SVL+ CS LASL G+ +H+ G + +++T ++++DM
Sbjct: 739 LQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDM 798
Query: 467 YLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
Y KCG++ + +F+ M + DV+SW +IVG +NG A+ A+ F EM +R++P+++T
Sbjct: 799 YAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVT 858
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FLGVL+AC HAG V E IF M Y + P L+H CM+DLLG+ G +AE+ I ++
Sbjct: 859 FLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKL 918
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
F+P+ IWA++L AC H + AE+L+ PE+ S YV+LSN+YA G WD ++
Sbjct: 919 NFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVN 978
Query: 646 KVRKAGKKLGEKK-AGMSWIEV 666
VR+A ++ G +K G SWI V
Sbjct: 979 SVRRAMREKGLRKLPGCSWIVV 1000
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 191/683 (27%), Positives = 310/683 (45%), Gaps = 117/683 (17%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ K++H + +K+G G+ ++ +YA ++ A K F+++ +++I++W ++++ Y
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ I + + G V PN F Y+ VL +C+ D+DLG+ +H + + E++
Sbjct: 158 SRQGSLEQVIWCFGSLQNCG-VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQV----HAFCV 193
+ +L+DMY KCGSL RK+FD A + W +M++G QV A V
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFD------AVVDPDTVSWTAMIAGYVQVGLPEEALKV 270
Query: 194 -----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC- 247
K G + V ++I + G +DD LF MP +VV+W +I G + C
Sbjct: 271 FEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCD 330
Query: 248 -----------------------FTLSALVDM---------------------------- 256
LSA+ +
Sbjct: 331 IEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSL 390
Query: 257 ---YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
Y+ C + A+K+FD A N+ LWN+M+ GY N + + L S +
Sbjct: 391 INMYAKCEKMEAAKKVFD------ALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G D +T+TS L AC L Q+H I+ +E + V + L+D+YA+ G ++
Sbjct: 445 GFWPDEFTYTSILSACACLECL--EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALE 502
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A + F + +D V+W+ +I+G + A+ +FR MI ++ ++S+L C+
Sbjct: 503 EARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCA 562
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L +L +G+QVH F VK G + +SLIDMY+KCG I+ +F MP R VVS
Sbjct: 563 NLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNA 622
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC----------------RHAG 537
II G QN EAI FQEM L P+EITF +L AC + G
Sbjct: 623 IIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRG 681
Query: 538 LVEEAWTIFTS-----MKPEYGLEPHL---EHYYCMVDLL--------GQAGCFDDAEQL 581
L+ + + S M + + + E Y +L Q GC ++A QL
Sbjct: 682 LLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQL 741
Query: 582 IAEM---PFKPDKTIWASMLKAC 601
EM +PD+ +AS+L+AC
Sbjct: 742 YQEMHRNNARPDQATFASVLRAC 764
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 182/656 (27%), Positives = 291/656 (44%), Gaps = 83/656 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + I GK +HC +IK G + F +L+ MY+ SL DA K+FD + +
Sbjct: 189 LSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDT 248
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M+ Y P A++++ M + G V P+ + V+ AC G LD +
Sbjct: 249 VSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV-PDQVAFVTVITACVGLGRLDDACDLFV 307
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSMLSG---- 184
++ + V N ++ +VK G + D + N W + S+LS
Sbjct: 308 QMPNT----NVVAWNVMISGHVKRGCDIEAI-DFFKNMWKTGVKSTRSTLGSVLSAIASL 362
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
G VHA +K+G +SLI+MY KC +++ +F+ + ER++V W ++
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAML 422
Query: 240 VG-------------------------------------CFEC----------------- 245
G C EC
Sbjct: 423 GGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFE 482
Query: 246 -SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ F + LVDMY+ C L EAR+ F+ + NV+ WN++I GYV E +EA
Sbjct: 483 YNLFVENTLVDMYAKCGALEEARQQFEFIRN-----RDNVS-WNAIIVGYVQEEDEDEAF 536
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ D + S L C NL QVH +V SG + GS+LID
Sbjct: 537 NMFRRMILDGIAPDEVSLASILSGCANLQALEQ--GEQVHCFLVKSGLQTCLYAGSSLID 594
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + G +++A +F +P + VV+ + +I G ++ L A LF++M N + ++
Sbjct: 595 MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEIT 653
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-DITLTSLIDMYLKCGEIDDGLALF-KF 482
+S+L C+ L G+Q+H KRG + D SL+ MY+ D LF +F
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEF 713
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + WT II G QNG ++EA+ +QEM ++ +P++ TF VL AC + +
Sbjct: 714 QYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG 773
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I S+ GL+ +VD+ + G + Q+ EM K D W SM+
Sbjct: 774 RMIH-SLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 246/537 (45%), Gaps = 64/537 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G+ LH IIK+ ++F N L+ MYA +L +A + F+ + ++
Sbjct: 457 LSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDN 516
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ Y + + A ++ M+ G + P+ +++L C+ L+ G +H
Sbjct: 517 VSWNAIIVGYVQEEDEDEAFNMFRRMILDG-IAPDEVSLASILSGCANLQALEQGEQVHC 575
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
+ + L+ ++L+DMYVKCG++ + ++ +V N++++G Q
Sbjct: 576 FLVKSGLQTCLYAGSSLIDMYVKCGAIEAARY----VFSCMPSRSVVSMNAIIAGYAQND 631
Query: 188 -VHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
V A + G ++T SL+D +++ G + + +R ++ + G +G
Sbjct: 632 LVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLL-YDGDFLG 690
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+L+ MY N +A LF ++ ++ LW ++ISG+ N +E
Sbjct: 691 V---------SLLVMYMNSQRKTDADILFSEFQYPKST-----ILWTAIISGHTQNGCSE 736
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ L +H + D TF S L+AC L + +H LI G + D + GS
Sbjct: 737 EALQLYQEMHRNNARPDQATFASVLRACSILASLGD--GRMIHSLIFHVGLDSDELTGSA 794
Query: 362 LIDLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
++D+YA+ G++KS++++F + K DV++W+ +I+G K+G A +F +M ++
Sbjct: 795 VVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRP 854
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ VL CS HA V G E DI + S +
Sbjct: 855 DDVTFLGVLTACS-----------HAGRVSEGREIFDIMVHS-----------------Y 886
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
K +P D + +I G+ G KEA + ++ +PN + + +L ACR G
Sbjct: 887 KIVPRLDHCAC--MIDLLGRWGFLKEAEEFIDKL---NFEPNAMIWATLLGACRIHG 938
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 118/213 (55%)
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
SR + +H + G+ +GS ++DLYA+ GNV+ A + F++L K+D++AW+ ++
Sbjct: 97 SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++ G F + N NQF + VL C+ L + GKQVH +K GFE
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
SLIDMY KCG + D +F + + D VSWT +I G Q G +EA+ F++M +
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
L P+++ F+ V++AC G +++A +F M
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D LR C S+ G+ +H I GL D TG+ ++ MYA + + ++F
Sbjct: 753 DQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVF 812
Query: 62 DEMARKN-IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
+EM KN ++SW +M+ + N A+++++ M ++ + P+ + VL ACS +G
Sbjct: 813 EEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEM-KHTRIRPDDVTFLGVLTACSHAGR 871
Query: 121 LDLGRLIHE 129
+ GR I +
Sbjct: 872 VSEGREIFD 880
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 330/671 (49%), Gaps = 95/671 (14%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D+ N L L +A ++FD+M++K+ +SWTT+++ Y + + A+ L+ +M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + F+ S KAC L+ D++ G L+H + L + + LLDMY K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 157 --TRKLFDQYS-----NWAA-------SAYGNVAL------WNS---------------- 180
R++F + +W A + Y AL W S
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 181 ----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L+ G+++HA +K+GF+ +L MY KCG+++ GL LF M RDVVSWT
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 287
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
II + LV M
Sbjct: 288 TII-----------TTLVQM---------------------------------------- 296
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
Q E A+ + S + + YTF + + C NL + Q+H LI+ G
Sbjct: 297 -GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE--WGEQLHALILHLGLAASL 353
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V ++++ +YA+ G + S+ +FH + ++D+V+WS +I G ++ G S A+ L M
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRME 413
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+F ++SVL C +A L GKQ+HA+ + G E + L++LI+MY KCG I++
Sbjct: 414 GPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA 473
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F D+VSWT +I G ++G ++E I F+++ + L+P+ +TF+GVLSAC HA
Sbjct: 474 SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV+ + F +M +Y + P EHY CM+DLL +AG DAE +I MPF D +W++
Sbjct: 534 GLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWST 593
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L+AC H + + AE++L P ++ L+N+YA+ G W + +RK K G
Sbjct: 594 LLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGV 653
Query: 657 -KKAGMSWIEV 666
K+ G SWI+V
Sbjct: 654 IKEPGWSWIKV 664
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 201/491 (40%), Gaps = 108/491 (21%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + CG + G+ LH +K GL +F G+ LL MY + + ++F EM +N
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++T A+ ++ M VE + + ++ LKAC+ SG L+ GR IH
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NW-------------- 167
+ ++ + + + NTL MY KCG L LF++ S +W
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 168 -AASAY---------GNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
A A+ N + +++SG G+Q+HA + G S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFE--------------- 244
MY KCG++ +F+ M RD+VSW+ II G FE
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEF 420
Query: 245 ------CSCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQY 273
+C ++ L ++MY C + EA ++FD
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD-- 478
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--IN 331
A+ ++ W +MI+GY + + E I L I G+ DS TF L AC
Sbjct: 479 ----AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
L++ R+ + S + Y +IDL R G + A + +P +D V W
Sbjct: 535 LVDLGFRYFNAMSKKYQISPSKEHY---GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVW 591
Query: 391 SGLIMGCTKHG 401
S L+ C HG
Sbjct: 592 STLLRACRVHG 602
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ GK LH ++ GL + L++MY S+ +A ++FD
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
+IVSWT M+ Y + I L+ + G + P+ + VL ACS +G +DLG
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRPDSVTFIGVLSACSHAGLVDLGF 540
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT 157
R + + ++ ++D+ + G L+
Sbjct: 541 RYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 347/671 (51%), Gaps = 45/671 (6%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQD-IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
++S+++G++LH +IIK S I+ N+L++ YA L A +FD + K+++SW
Sbjct: 19 HQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWN 78
Query: 74 TMVTAYTSNKRP---NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
++ Y S + P ++ + L+ M ++ PN +S + A S + G+ H
Sbjct: 79 CLINGY-SQQGPTGSSFVMELFQRM-RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAV 136
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ YD + ++LL+MY K G L R++FD+ N W +M+SG
Sbjct: 137 AIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPER------NEVTWATMISGYAIQ 190
Query: 185 ---GKQVHAFCVKRGFEKEDV---TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ F + R E+EDV TS++ +D G + + ++ + I
Sbjct: 191 RLAGEAFEVFELMRR-EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSI 249
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
L+ALV MY+ C L ++ ++F+ S N W++MI+GY +
Sbjct: 250 -----------LNALVTMYAKCGSLDDSLQVFEM------SNDKNSITWSAMITGYAQSG 292
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ +A+ L S +H +G+ +T L AC + QVH ++ G+E +
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEE--GKQVHNYLLKLGFESQLYI 350
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+YA+ G + A + F+ L + D+V W+ +I G ++G N A L+ M
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N+ ++SVLK CS LA+ +G+Q+HA +K G E ++L MY KCG +++G
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNI 470
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F+ MPERD++SW +I G QNG KEA+ F+EM Q KP+++TF+ VLSAC H GL
Sbjct: 471 VFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGL 530
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+ W F M E+GL P +EHY CMVD+L +AG +A++ I +W +L
Sbjct: 531 VDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILL 590
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC + N +L + E+L+ ++ S YV+LS +Y LG + + +VR K G K
Sbjct: 591 GACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSK 650
Query: 658 KAGMSWIEVSS 668
+ G SWIE+ S
Sbjct: 651 EPGCSWIELKS 661
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 143/340 (42%), Gaps = 58/340 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C ++++GK +H ++K G ++ L+ MYA DA K F+ +
Sbjct: 316 LVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQ 375
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ ++V WT+M+ Y N A+ LY M G + PN ++VLKACS D GR
Sbjct: 376 QPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEG-ILPNELTMASVLKACSNLAAFDQGR 434
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLFDQYSNWAASAYGNVALWN 179
IH R + L + + + L MY KCG+L R++ ++ ++ WN
Sbjct: 435 QIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER----------DIISWN 484
Query: 180 SMLSG------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+SG GK+ ++ + +DVT +++ G +D G F M +
Sbjct: 485 AMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDE 544
Query: 231 --------------DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD---QY 273
DV+S G + +E F S +D + LC R L Y
Sbjct: 545 FGLLPKVEHYACMVDVLSRAGKL---YEAKEFIESTTID-----HGLCLWRILLGACRNY 596
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
++ AY L L Q A LLS I+++
Sbjct: 597 RNYELGAYAGEKLME-------LGSQESSAYVLLSGIYTA 629
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 226/748 (30%), Positives = 350/748 (46%), Gaps = 98/748 (13%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++ QG+ LH R++K LS F LL MY SL DA K+FDEM + I +W
Sbjct: 56 CVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+ A+ S+ + AI LY M G V + + +VLKAC G+ LG IH
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLG-VAIDACTFPSVLKACGALGESRLGAEIHGVAV 172
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFD---------------------------- 162
+ + N L+ MY KCG L R LFD
Sbjct: 173 KCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEA 232
Query: 163 -------QYSNWAASAYGNVALWN-----SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
Q A++ Y VA S + G +H +K + +LI M
Sbjct: 233 LSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAM 292
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF--TLSALVDMYSNC-------- 260
Y KCG ++D +F M RD VSW ++ G + + L+ DM ++
Sbjct: 293 YAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSV 352
Query: 261 -NVLCEARK----------------------------LFDQYSSWAASAYGNVAL----- 286
N++ + + L D Y+ + A
Sbjct: 353 LNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHE 412
Query: 287 -----WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
W ++I+GY NE + EAI L + GM +D S L+AC L + N F
Sbjct: 413 KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRN--FIR 470
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
++HG + D ++ + ++++Y +G+ A F + KD+V+W+ +I C +G
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNG 529
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L A LF + +N + I S L + L+SL++GK++H F +++GF E +
Sbjct: 530 LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS 589
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL+DMY CG +++ +F + +RD++ WT +I G +G EAIA F++M + P
Sbjct: 590 SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIP 649
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ ITFL +L AC H+GL+ E F MK Y LEP EHY CMVDLL ++ ++A Q
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQF 709
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
+ MP KP +W ++L AC H+N +L + A++LL + ++ KY ++SN++A G W
Sbjct: 710 VRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRW 769
Query: 642 DSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+ + +VR K G KK G SWIEV +
Sbjct: 770 NDVEEVRLRMKGNGLKKNPGCSWIEVDN 797
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 231/523 (44%), Gaps = 32/523 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL+ +K G +H +K D++ N L++MYA + DA ++F M
Sbjct: 252 VAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLC 311
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++ VSW T+++ N+ A+ + M + + +P+ ++ A SG+L G+
Sbjct: 312 RDYVSWNTLLSGLVQNELYRDALNYFRDM-QNSAQKPDQVSVLNLIAASGRSGNLLNGKE 370
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+H R L+ + + NTL+DMY KC + + + ++ W ++++G
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGY----AFECMHEKDLISWTTIIAGYA 426
Query: 187 Q----VHAFCVKRGFEKE--DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
Q + A + R + + DV + + C GL NF+ E G +
Sbjct: 427 QNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC----SGLKSRNFIRE-----IHGYVF 477
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+A+V++Y AR+ F+ S ++ W SMI+ V N
Sbjct: 478 KRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRS------KDIVSWTSMITCCVHNGLP 531
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + + + DS SAL A NL + ++HG ++ G+ L+ + S
Sbjct: 532 VEALELFYSLKQTNIQPDSIAIISALSATANLSSLKK--GKEIHGFLIRKGFFLEGPIAS 589
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L+D+YA G V+++ ++FH + ++D++ W+ +I HG + A LF+ M + N
Sbjct: 590 SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIP 649
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLA 478
+ ++L CS + GK+ +K G++ E ++D+ + +++
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEI-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQ 708
Query: 479 LFKFMPERDVVS-WTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+ MP + W ++ C + + +E++QS K
Sbjct: 709 FVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTK 751
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S +L +C + +L +G+Q+HA +K T L+ MY KCG + D + +F M E
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTE 107
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
R + +W ++ +G+ EAI ++EM + + TF VL AC G
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 235/828 (28%), Positives = 365/828 (44%), Gaps = 187/828 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L + +++ G+ +HC +IK GL ++ + G L+ MYA L DA ++FD + N
Sbjct: 167 LSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNT 226
Query: 70 VSWTTMVTAYT-----------------SNKRPN-------------------------- 86
V WT + + Y RP+
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGE 286
Query: 87 --------WAIRLYNH--------MLEY------GSVEPNGFMYSAVLKACSLSGDLDLG 124
W + + H +EY SV+ +VL A + +LDLG
Sbjct: 287 MPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
++H + L + + ++L+ MY KC + K+F+ A N LWN+M+
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE------ALEERNDVLWNAMI 400
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
G G Q H+ +K+
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLT 460
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------- 241
K +L+DMY KCG ++D +F M +RD VSW II G
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRM 520
Query: 242 --------------------------------CFECSC------FTLSALVDMYSNCNVL 263
C C T S+L+DMYS C ++
Sbjct: 521 NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGII 580
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ARK+F W+ V N++I+GY N EEA+ L + + G+ TF
Sbjct: 581 EDARKVFSSMPEWS------VVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFA 633
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ ++AC + Q HG I+ G+ E +Y+ G +L+ LY + A LF
Sbjct: 634 TIVEACHKPESLT--LGTQFHGQIIKWGFSSEGEYL-GISLLGLYMNSRRMAEACALFSE 690
Query: 382 LP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
L K +V W+G++ G +++G A +++M + +Q +VL+VCS L+SLR
Sbjct: 691 LSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLRE 750
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCG 499
G+ +H+ + +++T +LIDMY KCG++ +F M R +VVSW +I G
Sbjct: 751 GRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYA 810
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+NG A++A+ F M QS + P+EITFLGVL+AC HAG V + IF M +YG+E +
Sbjct: 811 KNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARV 870
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
+H CMVDLLG+ G +A+ I KPD +W+S+L AC H + I AE+L+
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIE 930
Query: 620 TSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P++ S YV+LSN+YA+ G W+ + +RKA + G KK G SWI+V
Sbjct: 931 LEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDV 978
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 180/646 (27%), Positives = 295/646 (45%), Gaps = 77/646 (11%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ GK++H + + G+ + GN ++ +YA ++ A K F+ + K++ +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+S +P +R + + E + PN F +S VL + +++ GR IH + + LE
Sbjct: 134 MYSSIGQPGKVLRSFVSLFE-NLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
++ L+DMY KC L +++FD + N W + SG G A
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVD------PNTVCWTCLFSGYVKAGLPEEAV 246
Query: 192 CV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
V G + + ++I+ Y+ G++ D LF MP DVV+W +I G +
Sbjct: 247 IVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRG 306
Query: 247 C-----------------FTLSALVDMYSNCNVL----------CEARK----------- 268
C T S L + S ++ EA K
Sbjct: 307 CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 269 -LFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L YS + A N LWN+MI GY N ++ + + L + SSG I
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +TFTS L C ++ + Q H +I+ + VG+ L+D+YA+ G ++ A +
Sbjct: 427 DDFTFTSLLSTCA--VSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQ 484
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F + +D V+W+ +I G + S A+ LF M + + ++S LK C+ +
Sbjct: 485 IFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHG 544
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +GKQVH VK G ++ T +SLIDMY KCG I+D +F MPE VVS +I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAG 604
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
QN +EA+ FQEM+ + P+EITF ++ AC H T F ++G
Sbjct: 605 YSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEAC-HKPESLTLGTQFHGQIIKWGFSS 662
Query: 558 HLEHYYCMVDLLG---QAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E Y + LLG + +A L +E+ +W M+
Sbjct: 663 EGE--YLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG 706
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 232/531 (43%), Gaps = 43/531 (8%)
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GK 186
LE D N++L MY G + L S + + N ++ +LS G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGR 180
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
Q+H +K G E+ +L+DMY KC + D +F+ + + + V WT + G +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAG 240
Query: 247 C--------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+++ Y + L +AR LF + S +V
Sbjct: 241 LPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS------PDVVA 294
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN MISG+ AI ++ S + T S L A + N + L VH
Sbjct: 295 WNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLD--LGLVVHAE 352
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G + VGS+L+ +Y++ +++A ++F L +++ V W+ +I G +G +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKV 412
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF DM +S +++ F +S+L C+ L G Q H+ +K+ K +L+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDM 472
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG ++D +F+ M +RD VSW II G Q+ EA F M + +
Sbjct: 473 YAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACL 532
Query: 527 LGVLSACRHA-GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L AC + GL + S+K GL+ L ++D+ + G +DA ++ + M
Sbjct: 533 ASTLKACTNVHGLYQGKQVHCLSVK--CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
P + + L A + NN + ++ +++L T +PS+ + V A
Sbjct: 591 P--EWSVVSMNALIAGYSQNNLEEAVVLFQEML-TKGVNPSEITFATIVEA 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 168/446 (37%), Gaps = 111/446 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ C + QGK +HC +K GL + + TG++L+ MY+ + DA K+F M
Sbjct: 532 LASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VS ++ Y+ N A+ L+ ML G V P+ ++ +++AC L LG
Sbjct: 592 EWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTKG-VNPSEITFATIVEACHKPESLTLGT 649
Query: 126 LIHERITREKLEYDTVLMN-TLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML 182
H +I + + + +LL +Y+ + LF + S+ + + LW M+
Sbjct: 650 QFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKS-----IVLWTGMM 704
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG G+ +H+ +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFECSCFTLSALVDMY 257
+++T +LIDMY KCG++ +F+ M R +VVSW +I G
Sbjct: 765 LDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLING---------------- 808
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
Y N E+A+ + + S +
Sbjct: 809 ------------------------------------YAKNGYAEDALKIFDSMRQSHIMP 832
Query: 318 DSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D TF L AC + + R ++ +I G E + ++DL R G ++ A
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 377 ELFH-RLPKKDVVAWSGLIMGCTKHG 401
+ + K D WS L+ C HG
Sbjct: 891 DFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 16/247 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V LR C S+++G+++H I D T N L+ MYA + + ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVF 790
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
DEM R+ N+VSW +++ Y N A+++++ M + + P+ + VL ACS +G
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGK 849
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+ GR I E I + +E + ++D+ + G L D + A + + LW+
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA--DDFIE-AQNLKPDARLWS 906
Query: 180 SMLSGGKQVHA------FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPER 230
S+L G ++H +R E E ++ + ++Y G ++ AL M +R
Sbjct: 907 SLL-GACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDR 965
Query: 231 DVVSWTG 237
V G
Sbjct: 966 GVKKVPG 972
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 222/772 (28%), Positives = 345/772 (44%), Gaps = 155/772 (20%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C R+++ GK H R+I +F N L+ MY + L A K+FD M +++
Sbjct: 49 FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDT 108
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM---------------------- 107
VSW M+ Y A +L++ M E V N +
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168
Query: 108 --------YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
++ VLK+CS D G IH + + D V + LLDMY KC L +
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228
Query: 158 RKLF-----DQYSNWAA---------SAYGNVALWNSM---------------------- 181
+ F + +W+A G + L+ M
Sbjct: 229 IQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGL 288
Query: 182 --LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
L G Q+H +K F + V T+ +DMY+KC + D LFN +P ++ S+ II
Sbjct: 289 SALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAII 348
Query: 240 VG------------------------------------------CFECSCFTLSALVDMY 257
VG C C +A++DMY
Sbjct: 349 VGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA-NAILDMY 407
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
C L EA +F++ S A + WN++I+ + N E+ ++L
Sbjct: 408 GKCGALVEACLVFEEMVSRDAVS------WNAIIAAHEQNGNEEKTLSLF---------- 451
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+H I+ S LD VG LID+Y++ G ++ A +
Sbjct: 452 -------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEK 486
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
L RL ++ VV+W+ +I G + + A F M+ D + F +++L C+ L +
Sbjct: 487 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 546
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+ GKQ+HA +K+ + + ++L+DMY KCG + D +F+ P RD V+W ++ G
Sbjct: 547 VELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG 606
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q+G +EA+ F+ M +KPN TFL VL AC H GLVE+ F SM YGL+P
Sbjct: 607 YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 666
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
LEHY C+VD++G++G A +LI MPF+ D IW ++L C+ H N ++ A +
Sbjct: 667 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSI 726
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
L PED + YV+LSN+YA GMW+ ++K+RK + G +K+ G SWIE+ S
Sbjct: 727 LQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKS 778
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 155/440 (35%), Gaps = 140/440 (31%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A R C + +G +H +K +I N +L MY +L +A +F+EM ++
Sbjct: 368 AFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRD 427
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ A+ N + L+ IH
Sbjct: 428 AVSWNAIIAAHEQNGNEEKTLSLF----------------------------------IH 453
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
RI + +L D+ + L+DMY KCG + + KL D+ A V WN+++SG
Sbjct: 454 NRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL------AEQTVVSWNAIISGFS 507
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GKQ+HA +K+ + +
Sbjct: 508 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 567
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
++L+DMY KCG + D +F P RD V+W ++ G
Sbjct: 568 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG--------------------- 606
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
Y + EEA+ + ++ + + TF
Sbjct: 607 -------------------------------YAQHGLGEEALKIFEYMQLENVKPNHATF 635
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L+AC + + + H ++ G + S ++D+ R G V ALEL +
Sbjct: 636 LAVLRACGH-MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM 694
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
P + D V W L+ C HG
Sbjct: 695 PFEADAVIWRTLLSICKIHG 714
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S + + CS +L GKQ HA + F+ LI MY+KC +++ +F MP+
Sbjct: 46 SHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQ 105
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RD VSW ++ G GR +A Q++ + + + +++ ++S H G + +
Sbjct: 106 RDTVSWNAMLFGYA--GRGDIGVA--QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 546 FTSM 549
F M
Sbjct: 162 FLQM 165
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 217/752 (28%), Positives = 363/752 (48%), Gaps = 113/752 (15%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+G +H IIK GL D++ NNLLS+YA ++ A LFDEM +++VSWTT+++
Sbjct: 29 SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++T K + A++L++ M+ G PN F S+ L++C G+ + G IH + LE
Sbjct: 89 SHTKTKHHSDALQLFDMMIGSGEY-PNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLE 147
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
+ + +L++ Y KCG + + + S G+V W +MLS
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLS--LVKDGGDVVSWTTMLSSLVENGKWGEAFEI 205
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
GK +HA + G E V T+++DMY K
Sbjct: 206 YVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSK 265
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------CSCFTLSAL 253
C + D + + N PE DV WT +I G + + FT S+L
Sbjct: 266 CRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSL 325
Query: 254 VD-----------------------------------MYSNC-NVLCEARKLFDQYSSWA 277
++ MY C ++ A K+F + +S
Sbjct: 326 LNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITS-- 383
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
NV W S+I+G+ ++ E++ L + + ++G+ +S+T ++ L AC +
Sbjct: 384 ----PNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVP 438
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+ +HG I+ + ++D V + L+D YA +G + A + + +D + ++ L
Sbjct: 439 --TMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARL 496
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ G + +A + M N +++F ++S L + L ++ GKQ+H + VK GF++
Sbjct: 497 NQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCH 556
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
SL+ +Y KCG I D FK + E D SW G+I G NG A++ F +M +
Sbjct: 557 SVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLA 616
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KP+ IT L ++SAC H GL+E F SM+ EY + P L+HY C+VDLLG+ G ++
Sbjct: 617 GVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEE 676
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A +I +M FKPD I ++L AC H N L +A + L P DP+ Y++L+N+Y
Sbjct: 677 AMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDN 736
Query: 638 LGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
G+ D K R+ ++ G +++ G W+E+ S
Sbjct: 737 AGLSDFGEKTRRLMRERGLRRSPGQCWMEIRS 768
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 233/541 (43%), Gaps = 82/541 (15%)
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWA 168
VL C+ S L G IH I + L++D L N LL +Y K + R LFD+ N
Sbjct: 21 VLSFCN-SNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNR- 78
Query: 169 ASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
+V W ++LS Q+ + G + TL+S + GE +
Sbjct: 79 -----DVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFER 133
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL-CEARKLFDQYSSWAA 278
G+ + + + +G E + F ++LV+ Y+ C EA KL
Sbjct: 134 GMQ----------IHCSAVKLG-LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDG-- 180
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
G+V W +M+S V N + EA + + SG+ + +TF L A + L +
Sbjct: 181 ---GDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLS-- 235
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+ +H ++ G EL+ ++ + ++D+Y++ + A+++ + P+ DV W+ LI G T
Sbjct: 236 YGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFT 295
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++ A +FRDM S N F SS+L S + SL G+Q H+ + G E +
Sbjct: 296 QNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLY 355
Query: 459 TLTSLIDMYLKCGEI-DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+L+DMY+KC I + + +F+ + +V+ WT +I G + R +++ F EM +
Sbjct: 356 IGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAA 414
Query: 518 RLKPNEITFLGVLSACRHA-----------------------------------GLVEEA 542
++PN T +L AC G+++EA
Sbjct: 415 GVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEA 474
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM---PFKPDKTIWASMLK 599
W++ +M + Y C+ L Q G A +++ M K D+ AS L
Sbjct: 475 WSVIGTMNLRDSIT-----YTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLS 529
Query: 600 A 600
A
Sbjct: 530 A 530
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 10/226 (4%)
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQ----VHGLIVTSGYELDYIVGSNLIDLYARLG 370
+C +++ + + C+ +L+F + +L+ +H I+ G + D + +NL+ LYA+
Sbjct: 4 LCTKTFSLSRFQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTF 63
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
V A LF +P +DVV+W+ ++ TK +S A LF MI S + N+F +SS L+
Sbjct: 64 GVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALR 123
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG----EIDDGLALFKFMPER 486
C L RG Q+H VK G E TSL++ Y KCG E L+L K
Sbjct: 124 SCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVK--DGG 181
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
DVVSWT ++ +NG+ EA + +MI+S + PNE TF+ +L A
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGA 227
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 332/662 (50%), Gaps = 36/662 (5%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + IIK G + L+S++ F S+ +A ++F+ + K V + TM+
Sbjct: 56 SLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLK 115
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y N A+R Y M V P + ++ +L+ + DL GR IH + +
Sbjct: 116 GYAKNSTLRDAVRFYERM-RCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQ 174
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
+ M ++++Y KC R++ D Y + ++ WN++++G Q GF
Sbjct: 175 SNLFAMTAVVNLYAKC----RQIEDAYKMFERMPQRDLVSWNTVVAGYAQ-------NGF 223
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------CFECSC 247
+ V + + + G+ D + L + +P V + +G FE
Sbjct: 224 ARRAVQVVLQMQ---EAGQKPDSITLVSVLPA--VADLKALRIGRSIHGYAFRAGFEYMV 278
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+A++D Y C + AR +F SS NV WN+MI GY N ++EEA
Sbjct: 279 NVATAMLDTYFKCGSVRSARLVFKGMSSR------NVVSWNTMIDGYAQNGESEEAFATF 332
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G+ + + AL AC NL + VH L+ D V ++LI +Y+
Sbjct: 333 LKMLDEGVEPTNVSMMGALHACANLGDLER--GRYVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ V A +F L K VV W+ +I+G ++G + A LF +M + + + F + S
Sbjct: 391 KCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVS 450
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ + L+ R+ K +H ++ +K T+LID + KCG I LF M ER
Sbjct: 451 VITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH 510
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V++W +I G G NG +EA+ F EM +KPNEITFL V++AC H+GLVEE F
Sbjct: 511 VITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFE 570
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK YGLEP ++HY MVDLLG+AG DDA + I +MP KP T+ +ML AC H N
Sbjct: 571 SMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNV 630
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+L A++L P+D +V+L+N+YA+ MWD +++VR A +K G +K G S +E+
Sbjct: 631 ELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVEL 690
Query: 667 SS 668
+
Sbjct: 691 RN 692
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 235/506 (46%), Gaps = 48/506 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ G+ +++G+ +H +I G ++F ++++YA + DA+K+F+ M ++++
Sbjct: 149 LQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDL 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T+V Y N A+++ M E G +P+ +VL A + L +GR IH
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQ-KPDSITLVSVLPAVADLKALRIGRSIHG 267
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R EY + +LD Y KCGS+ R +F S+ NV WN+M+ G
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR------NVVSWNTMIDGYAQ 321
Query: 185 -GKQVHAFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ AF + G E +V++ + G+++ G + + E+ +
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKI------ 375
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN-----VALWNSMISG 293
F+ S +++L+ MYS C + AAS +GN V WN+MI G
Sbjct: 376 ---GFDVS--VMNSLISMYSKCKRV-----------DIAASVFGNLKHKTVVTWNAMILG 419
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y N EA+ L + S + DS+T S + A +L +R A +HGL + + +
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADL--SVTRQAKWIHGLAIRTLMD 477
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ V + LID +A+ G +++A +LF + ++ V+ W+ +I G +G A LF +M
Sbjct: 478 KNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEM 537
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
N + N+ SV+ CS + G + G E +++D+ + G
Sbjct: 538 QNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGR 597
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGC 498
+DD + MP + ++ G ++G
Sbjct: 598 LDDAWKFIQDMPVKPGITVLGAMLGA 623
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 59/285 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L ++++ G+S+H + G + +L Y S+ A +F M+
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS 305
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSW TM+ Y N A + ML+ G VEP L AC+ GDL+ GR
Sbjct: 306 SRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEG-VEPTNVSMMGALHACANLGDLERGR 364
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN-----VALWNS 180
+H + +K+ +D +MN+L+ MY KC + + AAS +GN V WN+
Sbjct: 365 YVHRLLDEKKIGFDVSVMNSLISMYSKCKRV---------DIAASVFGNLKHKTVVTWNA 415
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
M+ G K +H ++
Sbjct: 416 MILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL 475
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+K T+LID + KCG I LF+ M ER V++W +I G
Sbjct: 476 MDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDG 520
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 330/639 (51%), Gaps = 47/639 (7%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY S+ DA +F + N VSWT +V A+ N A+ Y M+ G + P+G
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGA 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKL-EYDTVLMNTLLDMYVKCG--SLTRKLFDQ 163
M+ + CS S DL G+L+H I +L E+D +L L+ MY +C L RK FD+
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAFCV--------KRGFEKEDVTLTSLIDMY 211
+ WN++++G G A + G + + +T +S +
Sbjct: 120 MGK------KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
G+I G R++ + T + + +AL++MYS C L ARK+FD
Sbjct: 174 SVVGDISQG---------REIEART--VASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + +V WN+MISGY +A+ L + + + TF L AC N
Sbjct: 223 RLKNR------DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAW 390
L + A +H + GYE D ++G+ L+++Y + + ++ A ++F RL +DV+ W
Sbjct: 277 LEDLEQGRA--IHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITW 334
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ LI+ ++G A +F+ M N N+ +S+VL C+ L + R+GK VHA +
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHAL-IA 393
Query: 451 RGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
G K D+ L SL++MY +CG +DD + +F + ++ +VSW+ +I Q+G ++ +
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLE 453
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
+F E++Q L +++T + LSAC H G+++E F SM ++GL P H+ CMVDLL
Sbjct: 454 HFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLL 513
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP-SKY 628
+AG + AE LI +MPF PD W S+L C+ HN+TK + +A++L ED S
Sbjct: 514 SRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTV 573
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVS 667
+LSNVYA G WD + K R ++ K G S+IE++
Sbjct: 574 TLLSNVYAEAGRWDDVRKTRN--RRAARKNPGCSYIEIN 610
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 241/533 (45%), Gaps = 72/533 (13%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V A+ C + +KQG+ LH I++ L + DI G L++MYA L A K FDEM
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS--VEPNGFMYSAVLKACSLSGDLDL 123
+K +V+W ++ Y+ N A+++Y M+ ++P+ +S+ L ACS+ GD+
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
GR I R D+++ N L++MY KCGSL RK+FD+ N +V WN+M
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR------DVIAWNTM 235
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWTG 237
+SG Y K G L LF M P+ +VV++ G
Sbjct: 236 ISG--------------------------YAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 238 IIVGC--------------------FECSCFTLSALVDMYSNC-NVLCEARKLFDQYSSW 276
++ C +E + L++MY+ C + L EAR++F++ +
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTR 329
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+V WN +I YV Q ++A+ + + + + T ++ L AC L
Sbjct: 330 ------DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVL--GA 381
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
R VH LI + + D ++ ++L+++Y R G++ + +F + K +V+WS LI
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV-KRGFEK 455
+HG + F +++ + + S L CS L+ G Q V G
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAP 501
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
+ ++D+ + G ++ L MP D V+WT ++ GC + K A
Sbjct: 502 DYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 219/757 (28%), Positives = 346/757 (45%), Gaps = 130/757 (17%)
Query: 9 ALRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
ALR C G R + +H + I GL +D GN L+ +Y+ + A ++F+E++ +
Sbjct: 47 ALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSAR 106
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+ VSW M++ Y N A+ LY M G V P ++ S+VL +C+ + GR +
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVV-PTPYVLSSVLSSCTKAELFAQGRSV 165
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL---TRKLFDQ-----------YSNWAASAYG 173
H + ++ +T + N L+ +Y++CGS R +D S A A+G
Sbjct: 166 HAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHG 225
Query: 174 NVAL-----------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
AL +S+L+ G Q+H++ K G + + SL
Sbjct: 226 EHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSL 285
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFE-------------- 244
+D+Y+KCG+++ L +FN +VV W I+V FE
Sbjct: 286 LDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQ 345
Query: 245 ---------CSC-----------------------FTLSALVDMYSNCNVLCEARKLFDQ 272
C+C + L+DMYS L +AR++ +
Sbjct: 346 FTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+V W SMI+GYV +E ++A+ + G+ D+ SA+ C +
Sbjct: 406 LKE------KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
R LQ+H + SGY D + + L++LYAR G ++ A F + KD + W+G
Sbjct: 460 KAM--RQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
L+ G + GL+ A +F M S N F S L + LA +++GKQ+HA +K G
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E +LI +Y KCG +D F M ER+ VSW II C Q+GR EA+ +F
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFD 637
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M + E + F SM +YG+ P +HY C++D+ G+A
Sbjct: 638 QMKK------------------------EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRA 673
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G D A++ + EMP D +W ++L AC+ H N ++ + A+ LL P D + YV+LS
Sbjct: 674 GQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLS 733
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
N YA G W + +VRK + G K+ G SWIEV +
Sbjct: 734 NAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKN 770
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 209/538 (38%), Gaps = 119/538 (22%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L C +++G LH + K G+S D +LL +Y + A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ R N+V W ++ A+ + L+ M G + PN F Y +L+ C+ +G++
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG-IRPNQFTYPCILRTCTCTGEI 361
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD----------------- 162
DLG IH + E D + L+DMY K G L R++ +
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 163 ---QYSNWAASAYGNV---ALWN------SMLSG---------GKQVHAFCVKRGFEKED 201
+Y A +A+ + +W S +SG G Q+HA G+ +
Sbjct: 422 VQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDV 481
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+L+++Y +CG I + + F + +D ++W G++ G F S L
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG------FAQSGL-------- 527
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+EEA+ + + SG+ + +T
Sbjct: 528 --------------------------------------HEEALKVFMRMDQSGVKHNVFT 549
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F SAL A NL Q+H ++ +G+ + VG+ LI LY + G+ + A F
Sbjct: 550 FVSALSASANLAEIKQ--GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSE 607
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +++ V+W+ +I C++HG A F M S K S + R
Sbjct: 608 MSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL--------SYFKSMSDKYGI-RP 658
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ H CV ID++ + G++D + MP D + W ++ C
Sbjct: 659 RPDHYACV--------------IDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSAC 702
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLI 347
++G++ E + ++L + + F AL+AC N R ++H
Sbjct: 13 LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRG----NGRRWQVVPEIHAKA 68
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+T G D IVG+ LIDLY++ G V A +F L +D V+W ++ G ++GL A
Sbjct: 69 ITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEAL 128
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L+R M + +++SSVL C+ +G+ VHA K+GF E +LI +Y
Sbjct: 129 WLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLY 188
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
L+CG +F MP RD V++ +I G Q + A+ F+EM S L P+ +T
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248
Query: 528 GVLSACRHAGLVEEA 542
+L+AC G +++
Sbjct: 249 SLLAACASLGDLQKG 263
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL IKQGK +H R+IK G S + GN L+S+Y S DA F EM+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-----------SVEPNGFMYSAVLKA 114
+N VSW T++T+ + + R A+ ++ M + G + P Y+ V+
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDI 669
Query: 115 CSLSGDLDLGRLIHER--ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY 172
+G LD + E I + + + T+L + ++ G L K + +++Y
Sbjct: 670 FGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASY 729
Query: 173 GNVALWNSMLSGGK-----QVHAFCVKRGFEKE 200
V L N+ GK QV RG KE
Sbjct: 730 --VLLSNAYAVTGKWANRDQVRKMMRDRGVRKE 760
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 220/750 (29%), Positives = 350/750 (46%), Gaps = 115/750 (15%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS++ G +H IIK G +D+F NNLLS+Y + +A +LFDEM +++ SWT ++
Sbjct: 29 RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLM 88
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+AY A+ L++ ML G PN F S L++CS + + G +T+
Sbjct: 89 SAYGKIGNHEEALELFDSMLISGEY-PNEFTLSTALRSCSALREFNHGTRFQALVTKSGF 147
Query: 137 EYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG---------- 184
+ + VL + L+D Y KCG ++F+ +N G++ W M+S
Sbjct: 148 DSNPVLGSALIDFYSKCGCTQEAYRVFEYMNN------GDIVSWTMMVSSFVEAGSWSQA 201
Query: 185 ---------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMY 211
GK VHA + E V T+L+DMY
Sbjct: 202 LQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMY 261
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC-------------------------- 245
KC I+D + + E DV WT II G +
Sbjct: 262 CKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYS 321
Query: 246 ----SCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQYSSW 276
+C ++ AL VDMY C+ + E D ++
Sbjct: 322 GILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE-----DAVRAF 376
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
A NV W S+I+G+ + EE+I + + G+ +S+T ++ L AC + +
Sbjct: 377 RGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLT 436
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
++HG I+ + + D +VG+ L+D YA LG V A + + +DV+ ++ L
Sbjct: 437 Q--TRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATR 494
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ G + +A + M + ++ F ++S L + + + GKQ+H + VK G
Sbjct: 495 INQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSW 554
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
L+D+Y KCG I D F + E D VSW G+I G NG A++ F++M
Sbjct: 555 ISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRL 614
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+ ++P++IT L VL AC H GLV+ F SM+ ++G+ P L+HY C+VDLLG+AG +
Sbjct: 615 AGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLE 674
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+A +I MPFKPD I+ ++L AC+ H N L +A Q L P DP+ YV+L+N+Y
Sbjct: 675 EAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYD 734
Query: 637 TLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
G + K R+ ++ G +K G SW+E
Sbjct: 735 DSGRSELGEKTRRMMRERGVRKNPGQSWME 764
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 1/216 (0%)
Query: 324 SALKACINLLNFNS-RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S LK ++ N S R + +H I+ G++ D + +NL+ LY + V A +LF +
Sbjct: 17 SLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEM 76
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P +DV +W+ L+ K G + A LF M+ S + N+F +S+ L+ CS L G
Sbjct: 77 PCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGT 136
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+ A K GF+ + ++LID Y KCG + +F++M D+VSWT ++ + G
Sbjct: 137 RFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAG 196
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+A+ + MIQ+ + PNE TF+ +L+A GL
Sbjct: 197 SWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL 232
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 351/657 (53%), Gaps = 38/657 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LH RI+K G +D G +L+ MY + L DA K+FDEM +++V W+++++ Y
Sbjct: 121 GRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVE 180
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + ++ M+ G + P+ M +V +AC G L L + +H + RE + D
Sbjct: 181 NGVYREGLEMFRSMICEG-IRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGS 239
Query: 142 LMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-------- 191
L N+L+ MY +CG L R +LF+ + + S W SM+S Q F
Sbjct: 240 LSNSLIVMYSQCGYLCRAKRLFECIDDRSTSC------WTSMISAYNQNECFEEALDVFI 293
Query: 192 -CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
E DVT+ S+++ + G + +G ++ F+ R+ + TG+ +G
Sbjct: 294 KMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVL-RNAMGVTGLDLG--------- 343
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
AL+D YS C + KL + N+ WN++IS Y N+EA+ + +
Sbjct: 344 PALIDFYSACWKMSSCEKLLHSIGN------ENIVSWNTLISFYAREGLNDEAMAFFACM 397
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+ G+ DS++ S++ A + + +F Q+HG ++ G+ D V ++L+D+Y++ G
Sbjct: 398 VAKGIMPDSFSLASSISASASSGSI--QFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCG 454
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
SA +F+++ K +VAW+ +I G +++G++ A LF +M + ++N+ S ++
Sbjct: 455 FASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQ 514
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS L L +GK +H + G + + T+L+DMY KCG++ +F + E+ VVS
Sbjct: 515 ACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVS 574
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W+ +I G +G+ A + F +M+ S +KPNE+TF+ +LSACRHAG V+E F +M+
Sbjct: 575 WSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMR 634
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
YG+ P++EH+ +VDLL +AG + A ++I + +IW ++L C + ++
Sbjct: 635 DYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMI 694
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
IAE+L S +D Y +LSN+YA G W KVR + +G KK G S +E+
Sbjct: 695 EYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEI 751
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 229/552 (41%), Gaps = 116/552 (21%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG+ ++ KS+H +++ G+ D N+L+ MY+ L A +LF+ + ++ W
Sbjct: 213 CGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCW 272
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+M++AY N+ A+ ++ M + VEPN +VL +C+ G L G+ +H +
Sbjct: 273 TSMISAYNQNECFEEALDVFIKMQD-SEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVL 331
Query: 133 REKLEYDTV-LMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS------ 183
R + + L L+D Y C ++ KL N N+ WN+++S
Sbjct: 332 RNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGN------ENIVSWNTLISFYAREG 385
Query: 184 --------------------------------------GGKQVHAFCVKRGFEKEDVTLT 205
G+Q+H +KRGF E V
Sbjct: 386 LNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQ-N 444
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
SL+DMY KCG +FN + + +V+W +I G +S + E
Sbjct: 445 SLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICG---------------FSQNGISVE 489
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A LFD+ + + + I+ TF SA
Sbjct: 490 ALSLFDE-------------------------------------MFKNRLEINKVTFLSA 512
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
++AC NL + +H I+ +G + D + + L+D+YA+ G++++A ++F + +K
Sbjct: 513 IQACSNLGYLDK--GKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEK 570
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
VV+WS +I HG + A LF M+ SN N+ ++L C S++ GK
Sbjct: 571 SVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGK--F 628
Query: 446 AFCVKR---GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGCGQN 501
F R G S++D+ + G+I+ + K + S W ++ GC
Sbjct: 629 YFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIY 688
Query: 502 GRAKEAIAYFQE 513
GR + I Y E
Sbjct: 689 GRM-DMIEYIAE 699
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 184/413 (44%), Gaps = 47/413 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++ L C + +K+GKS+HC +++ + + G L+ Y+ ++ KL +
Sbjct: 307 MISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSI 366
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+NIVSW T+++ Y + A+ + M+ G + P+ F ++ + A + SG + G
Sbjct: 367 GNENIVSWNTLISFYAREGLNDEAMAFFACMVAKG-IMPDSFSLASSISASASSGSIQFG 425
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
+ IH + + +D + N+L+DMY KCG + Y+ + + ++ WN M+ G
Sbjct: 426 QQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFAS----SAYTIFNKIKHKSIVAWNCMICG 480
Query: 185 ----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G V A + K E VT S I G +D G + +
Sbjct: 481 FSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHH---------- 530
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
IIV + + +ALVDMY+ C L A+K+FD + +V W++MI+ +
Sbjct: 531 -KIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFD------SIVEKSVVSWSTMIAAHG 583
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-----INLLNFNSRFALQVHGLIVTS 350
++ Q A +L + S + + TF + L AC + F +G++
Sbjct: 584 IHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNV 643
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFH--RLPKKDVVAWSGLIMGCTKHG 401
+ ++++DL +R G++ A E+ R P + W L+ GC +G
Sbjct: 644 EHF------ASIVDLLSRAGDINGAYEIIKSIRTPVAASI-WGALLNGCRIYG 689
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 5/266 (1%)
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R Q+H +V + + + + L++ Y+++G+++S+ +F+ P D +S LI
Sbjct: 15 RRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCH 74
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQ---FIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+ L LF I + Q F+ SV++ + + L G+++H +K GF
Sbjct: 75 LWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFC 134
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
++ + TSL+ MY + + D +F M RD+V W+ II +NG +E + F+ M
Sbjct: 135 EDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSM 194
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
I ++P+ + L V AC G + A ++ + E G+ ++ + Q G
Sbjct: 195 ICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMRE-GMVGDGSLSNSLIVMYSQCGY 253
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKA 600
A++L E + W SM+ A
Sbjct: 254 LCRAKRLF-ECIDDRSTSCWTSMISA 278
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 329/671 (49%), Gaps = 95/671 (14%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D+ N L L +A ++FD+M++K+ +SWTT+++ Y + + A+ L+ +M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + F+ S KAC L+ D++ G L+H + L + + LLDMY K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 157 --TRKLFDQYS-----NWAA-------SAYGNVAL------WNS---------------- 180
R++F + +W A + Y AL W S
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 181 ----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L+ G+++HA +K+GF+ +L MY KCG+++ GL LF M RDVVSWT
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 287
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
II + LV M
Sbjct: 288 TII-----------TTLVQM---------------------------------------- 296
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
Q E A+ + S + + YTF + + C NL + Q+H LI+ G
Sbjct: 297 -GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE--WGEQLHALILHLGLAASL 353
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V ++++ +YA+ G + S+ +FH + ++D+V+WS +I G + G S A+ L M
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRME 413
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+F ++SVL C +A L GKQ+HA+ + G E + L++LI+MY KCG I++
Sbjct: 414 GPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA 473
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F D+VSWT +I G ++G ++E I F+++ + L+P+ +TF+GVLSAC HA
Sbjct: 474 SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV+ + F +M +Y + P EHY CM+DLL +AG DAE +I MPF D +W++
Sbjct: 534 GLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWST 593
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L+AC H + + AE++L P ++ L+N+YA+ G W + +RK K G
Sbjct: 594 LLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGV 653
Query: 657 -KKAGMSWIEV 666
K+ G SWI+V
Sbjct: 654 IKEPGWSWIKV 664
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 199/495 (40%), Gaps = 116/495 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + CG + G+ LH +K GL +F G+ LL MY + + ++F EM +N
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++T A+ ++ M VE + + ++ LKAC+ SG L+ GR IH
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NW-------------- 167
+ ++ + + + NTL MY KCG L LF++ S +W
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 168 -AASAY---------GNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
A A+ N + +++SG G+Q+HA + G S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFE--------------- 244
MY KCG++ +F+ M RD+VSW+ II G FE
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEF 420
Query: 245 ------CSCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQY 273
+C ++ L ++MY C + EA ++FD
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD-- 478
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
A+ ++ W +MI+GY + + E I L I G+ DS TF L AC
Sbjct: 479 ----AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC---- 530
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKD 386
S L G + Y + + +IDL R G + A + +P +D
Sbjct: 531 ---SHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRD 587
Query: 387 VVAWSGLIMGCTKHG 401
V WS L+ C HG
Sbjct: 588 DVVWSTLLRACRVHG 602
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ GK LH ++ GL + L++MY S+ +A ++FD
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+IVSWT M+ Y + I L+ + G + P+ + VL ACS +G +DLG
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRPDSVTFIGVLSACSHAGLVDLG 539
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 211/672 (31%), Positives = 345/672 (51%), Gaps = 40/672 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-N 68
L+ CG + + G +H IK G +F N+++ MY LN A +LFD M K +
Sbjct: 223 LKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKED 282
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +M++AY+SN + A+RL+ M + S+ PN + + A L+AC S + G IH
Sbjct: 283 VVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + + + N L+ MY + G + +F +W + WNSMLSG
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW------DTISWNSMLSGFV 395
Query: 187 QVHAFCVKRGF--------EKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
Q + F +K D V + S+I + G +G+ + + + + S
Sbjct: 396 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDS--D 453
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ VG ++LVDMY+ + +FD+ +V W ++I+G+ N
Sbjct: 454 LQVG---------NSLVDMYAKFCSMKYMDCIFDKMPD------KDVVSWTTIIAGHAQN 498
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ A+ L + G+ +D +S L AC L +S ++H I+ G D +
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS--VKEIHSYIIRKGLS-DLV 555
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+ + ++D+Y GNV A +F + KDVV+W+ +I +GL + A LF M +
Sbjct: 556 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 615
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + + S+L + L++L++GK++H F +++GF E ++L+DMY +CG ++
Sbjct: 616 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 675
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F F+ +D+V WT +I G +G + AI F+ M + P+ I F+ VL AC H+G
Sbjct: 676 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 735
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L+ E SMK EY LEP EHY C+VDLLG+A ++A Q + M +P +W ++
Sbjct: 736 LMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 795
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC+ H+N +L I A++LL PE+P YV++SNVYA W + +VR K G K
Sbjct: 796 LGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLK 855
Query: 658 K-AGMSWIEVSS 668
K G SWIEV +
Sbjct: 856 KNPGCSWIEVGN 867
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/606 (27%), Positives = 294/606 (48%), Gaps = 38/606 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L CG ++++ +G+ +H +I L +F L+ MY L DA KLFD M K
Sbjct: 121 LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 180
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
I +W M+ AY +N P ++ LY M G + + + +LKAC L D G +H
Sbjct: 181 IFTWNAMIGAYVTNGEPLGSLELYREMRVSG-IPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+E + N+++ MY KC L R+LFD+ +V WNSM+S
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE-----DVVSWNSMISAYS 294
Query: 185 --GKQVHAFCVKRGFEKEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+ + A + +K + + + C + +F+ + + T ++
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS-------SFIKQGMFIHAT-VLK 346
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+ + F +AL+ MY+ + EA +F W + WNSM+SG+V N
Sbjct: 347 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW------DTISWNSMLSGFVQNGLY 400
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + +G D S + A + N+ +Q+H + +G + D VG+
Sbjct: 401 HEALQFYHEMRDAGQKPDLVAVISIIAASAR--SGNTLNGMQIHAYAMKNGLDSDLQVGN 458
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L+D+YA+ ++K +F ++P KDVV+W+ +I G ++G +S A LFR++ D+
Sbjct: 459 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 518
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLAL 479
+ +ISS+L CS L + K++H++ +++G D+ L + ++D+Y +CG +D +
Sbjct: 519 DVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAARM 576
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + +DVVSWT +I NG A EA+ F M ++ ++P+ I+ + +LSA +
Sbjct: 577 FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSAL 636
Query: 540 EEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ I + + + LE L +VD+ + G + + + + K D +W SM+
Sbjct: 637 KKGKEIHGFLIRKGFVLEGSLAS--TLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMI 693
Query: 599 KACETH 604
A H
Sbjct: 694 NAYGMH 699
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 221/534 (41%), Gaps = 98/534 (18%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL+ C IKQG +H ++K ++F N L++MYA F + +A +F M
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+ +SW +M++ + N + A++ Y+ M + G +P+ +++ A + SG+ G
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLNGMQ 440
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSN-----WAASAYG------ 173
IH + L+ D + N+L+DMY K S+ +FD+ + W G
Sbjct: 441 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 500
Query: 174 ------------------NVALWNSML---------SGGKQVHAFCVKRGFEKEDVTLTS 206
+V + +S+L S K++H++ +++G + V
Sbjct: 501 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNG 559
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
++D+Y +CG +D +F + +DVVSWT +I SC
Sbjct: 560 IVDVYGECGNVDYAARMFELIEFKDVVSWTSMI------SC------------------- 594
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
YV N EA+ L + +G+ DS + S L
Sbjct: 595 ---------------------------YVHNGLANEALELFHLMKETGVEPDSISLVSIL 627
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
A + ++HG ++ G+ L+ + S L+D+YAR G ++ + +F+ + KD
Sbjct: 628 SA--AASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 685
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VH 445
+V W+ +I HG A LFR M + + + +VL CS + G++ +
Sbjct: 686 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLE 745
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + E L+D+ + +++ K M E W ++ C
Sbjct: 746 SMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGAC 799
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 17/310 (5%)
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----QVHGLIVTSG 351
+NE + L ++ S +D ++S L+ C S+ AL QVH ++TS
Sbjct: 92 VNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELC------GSKKALSEGQQVHAHMITSN 144
Query: 352 YELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ + + + L+ +Y + G + A +LF +P K + W+ +I +G + L+
Sbjct: 145 ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 204
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R+M S ++ +LK C L R G +VH +K G+ S++ MY KC
Sbjct: 205 REMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 264
Query: 471 GEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
+++ LF MPE+ DVVSW +I NG++ EA+ F EM ++ L PN TF+
Sbjct: 265 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 324
Query: 530 LSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
L AC + +++ I T +K Y + + + ++ + + G +A + M
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-D 381
Query: 589 PDKTIWASML 598
D W SML
Sbjct: 382 WDTISWNSML 391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 54/284 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++ + + + G +H +K GL D+ GN+L+ MYA F S+ +F
Sbjct: 418 DLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 477
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M K++VSWTT++ + N + A+ L+ + G ++ + M S++L ACS +
Sbjct: 478 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG-IDLDVMMISSILLACSGLKLI 536
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ IH I R+ L D VL N ++D+Y +CG++ ++F+ + +V W
Sbjct: 537 SSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIE------FKDVVSWT 589
Query: 180 SMLS--------------------------------------------GGKQVHAFCVKR 195
SM+S GK++H F +++
Sbjct: 590 SMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK 649
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
GF E ++L+DMY +CG ++ +FNF+ +D+V WT +I
Sbjct: 650 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 693
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 278/512 (54%), Gaps = 26/512 (5%)
Query: 159 KLFDQYSNWAASAYGNV---ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
++ Q +AS Y + + + +L GK+VH GF L L++MY KC
Sbjct: 60 QILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCD 119
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ D LF+ MPERD+ SW +I G Y+ +L EA+ LFD+
Sbjct: 120 SLMDSQKLFDEMPERDLCSWNILISG---------------YAKMGLLQEAKSLFDKMPE 164
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
N + W +MISGYV +++ EA+ L + S S FT +
Sbjct: 165 -----RDNFS-WTAMISGYVRHDRPNEALELFRMMKRSDNS-KSNKFTVSSALAAAAAVP 217
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
R ++HG I+ +G + D +V S L D+Y + G+++ A +F ++ +D+V W+ +I
Sbjct: 218 CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMID 277
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
+ G + LF D++ S N+F S VL C+ S GK+VH + + GF+
Sbjct: 278 RYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDP 337
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
++L+ MY KCG + +FK P+ D+ SWT +I G QNG+ EAI YF+ ++
Sbjct: 338 FSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLV 397
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S +P+ ITF+GVLSAC HAGLV++ F S+K +YGL +HY C++DLL ++G F
Sbjct: 398 KSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQF 457
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+AE +I++M KPDK +WAS+L C H N KL AE L PE+P+ YV L+N+Y
Sbjct: 458 DEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIY 517
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
AT GMW ++K+RK G KK G+SWI +
Sbjct: 518 ATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAI 549
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 49/369 (13%)
Query: 294 YVLNEQN--EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ---VHGLIV 348
++L +QN +EA+ +L I + +++ +++CI SR Q VH I
Sbjct: 47 HILCQQNRLKEALQILHQIDKPSASV----YSTLIQSCIK-----SRLLQQGKKVHQHIK 97
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
SG+ + + L+++YA+ ++ + +LF +P++D+ +W+ LI G K GL A
Sbjct: 98 LSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKS 157
Query: 409 LFRDMI--------------------------------NSNQDVNQFIISSVLKVCSCLA 436
LF M + N N+F +SS L + +
Sbjct: 158 LFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVP 217
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
LR GK++H + ++ G + +++ ++L DMY KCG I++ +F M +RD+V+WT +I
Sbjct: 218 CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMID 277
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
Q+GR KE F ++++S ++PNE TF GVL+AC + E + M G +
Sbjct: 278 RYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMT-RVGFD 336
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P +V + + G AE++ E P +PD W S++ A N +I +
Sbjct: 337 PFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLI-AGYAQNGQPDEAIRYFE 394
Query: 617 LLATSPEDP 625
LL S P
Sbjct: 395 LLVKSGTQP 403
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 144/595 (24%), Positives = 226/595 (37%), Gaps = 148/595 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + R ++QGK +H I G +F N LL MYA SL D+ KLFDEM +++
Sbjct: 77 IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDL 136
Query: 70 -------------------------------VSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
SWT M++ Y + RPN A+ L+ M
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRS 196
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+ + N F S+ L A + L +G+ IH I R L+ D V+ + L DMY KCGS+
Sbjct: 197 DNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 256
Query: 157 TRKLFDQYSN-----WAA------------------------SAYGNVALWNSMLSG--- 184
R +FD+ + W A N ++ +L+
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
GK+VH + + GF+ ++L+ MY KCG + +F P+ D+ SWT +
Sbjct: 317 QTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I G Y N
Sbjct: 377 IAG----------------------------------------------------YAQNG 384
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINL------LNFNSRFALQVHGLIVTSGY 352
Q +EAI + SG D TF L AC + L++ Q +GL T+ +
Sbjct: 385 QPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQ-YGLTHTADH 443
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAY---- 407
+ +IDL AR G A + ++ K D W+ L+ GC HG LA
Sbjct: 444 Y------ACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAE 497
Query: 408 -LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE----KEDITLTS 462
L + N V I + + S +A +R+ K G K D+ +
Sbjct: 498 ALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFL 557
Query: 463 L-IDMYLKCGEIDDGLA-LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ D + K EI++ L L K M E V T ++ ++ + ++ ++Y E +
Sbjct: 558 VGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKL 612
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I + + +K AL++ H++ K +S LI C K L
Sbjct: 46 IHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRL-------------------- 85
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
L++GK+VH GF L L++MY KC + D LF
Sbjct: 86 ---------------LQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDE 130
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MPERD+ SW +I G + G +EA + F +M + + ++ ++S EA
Sbjct: 131 MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRHDRPNEA 186
Query: 543 WTIFTSMK 550
+F MK
Sbjct: 187 LELFRMMK 194
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 215/702 (30%), Positives = 345/702 (49%), Gaps = 98/702 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS----LNDAHKLFDE-- 63
L+ C + G+++H R +K GL + NNLLS Y + L DA +LFDE
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+AR+N+ +W ++++ + + R A ++ M E +V S + L+
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV-------SWTVMVVGLNRAGRF 145
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSML 182
G I TLLDM + T+ L + S+ A + G V
Sbjct: 146 GEAI----------------KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAV------- 182
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G++VH+F VK G S+++MY KCG+ + +F MP R V SW
Sbjct: 183 --GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSW------- 233
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+A+V + ++ + A LF+ ++ WN+MI+GY N + +
Sbjct: 234 --------NAMVSLNTHLGRMDLAESLFESMPG------RSIVSWNAMIAGYNQNGLDAK 279
Query: 303 AITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV------------- 348
A+ L S +H S M D +T TS L AC NL N R QVH I+
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNV--RIGKQVHAYILRTEMAYNSQVTNA 337
Query: 349 -TSGY-------------------ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
S Y +L+ I + L++ Y ++G+++SA E+F + +DVV
Sbjct: 338 LISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
AW+ +I+G ++G N A LFR MI + N + +++VL VC+ LA L GKQ+H
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA 457
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEA 507
++ E+ ++I MY + G +F + ++ ++WT +IV Q+G+ +EA
Sbjct: 458 IRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEA 517
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F+EM+++ ++P+ IT++GVLSAC HAG V E + +K E+ + P + HY CMVD
Sbjct: 518 VGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVD 577
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LL +AG F +A++ I MP +PD W S+L AC H N +L + AE+LL+ P +
Sbjct: 578 LLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGA 637
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEVSS 668
Y ++NVY+ G W +++ KA K K K+ G SW + S
Sbjct: 638 YSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 213/673 (31%), Positives = 333/673 (49%), Gaps = 44/673 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG ++ +H G D+F G+ L+ +YAD + DA ++FDE+ ++
Sbjct: 119 IKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDT 178
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W M+ Y + + AI + M Y V N Y+ +L C+ G+ G +H
Sbjct: 179 ILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV--NSVTYTCILSICATRGNFCAGTQLH 236
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ E+D + NTL+ MY KCG+L RKLF+ + WN +++G
Sbjct: 237 GLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQ------TDTVTWNGLIAG-- 288
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
V+ GF E L + + G D + +F+P + +G + C E
Sbjct: 289 -----YVQNGFTDE---AAPLFNAMISAGVKPDSVTFASFLPS---ILESGSLRHCKEVH 337
Query: 247 CFTL-----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+ + SAL+D+Y + ARK+F Q + +VA+ +MISGYV
Sbjct: 338 SYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ------NILVDVAVCTAMISGYV 391
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
L+ N +AI + GM +S T S L AC + L H I+ E
Sbjct: 392 LHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCH--ILKKRLENI 449
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VGS + D+YA+ G + A E F R+ +D V W+ +I +++G +A LFR M
Sbjct: 450 VNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGM 509
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S + +SS L + L +L GK++H + ++ F + ++LIDMY KCG +
Sbjct: 510 SGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLAL 569
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M ++ VSW II G +G +E + + EM+++ + P+ +TFL ++SAC H
Sbjct: 570 AWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGH 629
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGLV+E F M EYG+ +EHY CMVDL G+AG +A I MPF PD +W
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWG 689
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC H N +L + + LL P++ YV+LSNV+A G W S+ KVR K+ G
Sbjct: 690 TLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKG 749
Query: 656 -EKKAGMSWIEVS 667
+K G SWI+V+
Sbjct: 750 VQKIPGYSWIDVN 762
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 228/555 (41%), Gaps = 95/555 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C ++Q + +H ++I G+ + +L +Y DA LF E+ +
Sbjct: 18 FRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYA 77
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W M+ ++A+ Y ML +V P+ + + V+KAC ++ L ++H+
Sbjct: 78 LPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 130 -------------------------------RITREKLEYDTVLMNTLLDMYVKCGSLTR 158
R+ E DT+L N +L YVK G
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 159 KLFDQYSNWAASAYGNVALWNSMLS---------GGKQVHAFCVKRGFEKEDVTLTSLID 209
+ + + N + +LS G Q+H + GFE + +L+
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + LFN MP+ D V+W G+I G
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAG---------------------------- 288
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
YV N +EA L + + S+G+ DS TF S L +
Sbjct: 289 ------------------------YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI 324
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + + R +VH IV D + S LID+Y + G+V+ A ++F + DV
Sbjct: 325 LE--SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAV 382
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ +I G HGLN A FR +I N ++SVL C+ +A+L+ GK++H +
Sbjct: 383 CTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHIL 442
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K+ E +++ DMY KCG +D F+ M +RD V W +I QNG+ + AI
Sbjct: 443 KKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAID 502
Query: 510 YFQEMIQSRLKPNEI 524
F++M S K + +
Sbjct: 503 LFRQMGMSGAKFDSV 517
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 138/302 (45%), Gaps = 8/302 (2%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T +IVG C S ++ +Y C +A LF + A WN MI G
Sbjct: 35 TQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALP------WNWMIRGLY 88
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ + A+ + S + D YTF +KAC L N + VH + G+ +D
Sbjct: 89 MLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNV--PLCMVVHDTARSLGFHVD 146
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
GS LI LYA G ++ A +F LP +D + W+ ++ G K G A F +M
Sbjct: 147 LFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRT 206
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S VN + +L +C+ + G Q+H + GFE + +L+ MY KCG +
Sbjct: 207 SYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLY 266
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
LF MP+ D V+W G+I G QNG EA F MI + +KP+ +TF L +
Sbjct: 267 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 326
Query: 536 AG 537
+G
Sbjct: 327 SG 328
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 49/347 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C ++K GK LHC I+K L + G+ + MYA L+ A++ F M+
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ V W +M+++++ N +P AI L+ M G+ + + SA+ A +L L G+
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPA-LYYGK 536
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-----KLFDQYS----NWAASAYGNVA 176
+H + R DT + +TL+DMY KCG+L L D + N +AYGN
Sbjct: 537 EMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHG 596
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L ++ ++ G + VT +I G +D+G+ F+ M
Sbjct: 597 CPRECL----DLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTRE-----Y 647
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS---------W-----AASAYG 282
GI +C +VD+Y + EA FD S W A +G
Sbjct: 648 GIGARMEHYAC-----MVDLYGRAGRVHEA---FDTIKSMPFTPDAGVWGTLLGACRLHG 699
Query: 283 NVALWNSMISGYV--LNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
NV L + S ++ L+ +N LLS++H+ D+ + S LK
Sbjct: 700 NVEL-AKLASRHLLELDPKNSGYYVLLSNVHA-----DAGEWASVLK 740
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 2/259 (0%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
A QVH ++ G S ++ LY G + A LF L + + W+ +I G
Sbjct: 30 ARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYM 89
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G A L + M+ SN +++ V+K C L ++ VH GF +
Sbjct: 90 LGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFA 149
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
++LI +Y G I D +F +P RD + W ++ G ++G AI F EM S
Sbjct: 150 GSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYS 209
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
N +T+ +LS C G A T + G E + +V + + G A
Sbjct: 210 MVNSVTYTCILSICATRGNF-CAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYAR 268
Query: 580 QLIAEMPFKPDKTIWASML 598
+L MP + D W ++
Sbjct: 269 KLFNTMP-QTDTVTWNGLI 286
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ S+ + CS + +++ +QVH + G + ++ +Y+ CG D LF +
Sbjct: 14 LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
R + W +I G G A+ ++ +M+ S + P++ TF V+ AC V
Sbjct: 74 LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + + G L ++ L G DA ++ E+P + D +W ML+
Sbjct: 134 VHDTAR-SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVMLRG 187
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 215/702 (30%), Positives = 345/702 (49%), Gaps = 98/702 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS----LNDAHKLFDE-- 63
L+ C + G+++H R +K GL + NNLLS Y + L DA +LFDE
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+AR+N+ +W ++++ + + R A ++ M E +V S + L+
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV-------SWTVMVVGLNRAGRF 145
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSML 182
G I TLLDM + T+ L + S+ A + G V
Sbjct: 146 GEAI----------------KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAV------- 182
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G++VH+F VK G S+++MY KCG+ + +F MP R V SW
Sbjct: 183 --GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSW------- 233
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+A+V + ++ + A LF+ ++ WN+MI+GY N + +
Sbjct: 234 --------NAMVSLNTHLGRMDLAESLFESMPD------RSIVSWNAMIAGYNQNGLDAK 279
Query: 303 AITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV------------- 348
A+ L S +H S M D +T TS L AC NL N R QVH I+
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNV--RIGKQVHAYILRTEMAYNSQVTNA 337
Query: 349 -TSGY-------------------ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
S Y +L+ I + L++ Y ++G+++SA E+F + +DVV
Sbjct: 338 LISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
AW+ +I+G ++G N A LFR MI + N + +++VL VC+ LA L GKQ+H
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA 457
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEA 507
++ E+ ++I MY + G +F + ++ ++WT +IV Q+G+ +EA
Sbjct: 458 IRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEA 517
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F+EM+++ ++P+ IT++GVLSAC HAG V E + +K E+ + P + HY CMVD
Sbjct: 518 VGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVD 577
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LL +AG F +A++ I MP +PD W S+L AC H N +L + AE+LL+ P +
Sbjct: 578 LLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGA 637
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEVSS 668
Y ++NVY+ G W +++ KA K K K+ G SW + S
Sbjct: 638 YSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 316/627 (50%), Gaps = 76/627 (12%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
++ +L +C S R IH RI + + + + N L+D Y KCG RK+FD+
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-EKEDVTLTSLIDMYLKCGEIDDGLALF 224
+Y A+ + + GK AF V + E + + +++ + + ++ L F
Sbjct: 82 QRNTFSYN--AVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 225 NFMPERDVV----SWTGIIVGC--------------------FECSCFTLSALVDMYSNC 260
M D V S+ + C + + SALVDMYS C
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
V+ A++ FD A N+ WNS+I+ Y N +A+ + + +G+ D
Sbjct: 200 GVVACAQRAFD------GMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEI 253
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVT-SGYELDYIVGSNLIDLYARLGNVKSALELF 379
T S + AC + R LQ+H +V Y D ++G+ L+D+YA+ V A +F
Sbjct: 254 TLASVVSACASWSAI--REGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 380 HRLP-------------------------------KKDVVAWSGLIMGCTKHGLNSLAYL 408
R+P +K+VV+W+ LI G T++G N A
Sbjct: 312 DRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVR 371
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKEDITL-TS 462
LF + + + ++L C+ LA L+ G+Q H +K GF E+ DI + S
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNS 431
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LIDMY+KCG ++DG +F+ M ERDVVSW +IVG QNG A+ F++M+ S KP+
Sbjct: 432 LIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPD 491
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+T +GVLSAC HAGLVEE F SM+ E GL P +H+ CMVDLLG+AGC D+A LI
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLI 551
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MP +PD +W S+L AC+ H N +L +AE+L+ P + YV+LSN+YA LG W
Sbjct: 552 QTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWK 611
Query: 643 SLSKVRKAGKKLGE-KKAGMSWIEVSS 668
+ +VRK ++ G K+ G SWIE+ S
Sbjct: 612 DVVRVRKQMRQRGVIKQPGCSWIEIQS 638
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 257/575 (44%), Gaps = 90/575 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L C + +S + +H RIIK S +IF N L+ Y DA K+
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 61 FDEMARKNIVS-------------------------------WTTMVTAYTSNKRPNWAI 89
FD M ++N S W MV+ + + R A+
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
R + M V N + + + L AC+ DL++G IH I++ + D + + L+DM
Sbjct: 137 RFFVDMHSEDFV-LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195
Query: 150 YVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAFC--VKRGFE 198
Y KCG + ++ FD A N+ WNS+++ GK + F + G E
Sbjct: 196 YSKCGVVACAQRAFD------GMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVE 249
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+++TL S++ I +GL + + +RD +++G +ALVDMY+
Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYR-NDLVLG---------NALVDMYA 299
Query: 259 NCNVLCEARKLFDQYS--------------SWAASAYG-----------NVALWNSMISG 293
C + EAR +FD+ + AAS NV WN++I+G
Sbjct: 300 KCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAG 359
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL--LNFNSRFALQV--HGLIVT 349
Y N +NEEA+ L + + YTF + L AC NL L + Q+ HG
Sbjct: 360 YTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQ 419
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
SG E D VG++LID+Y + G V+ +F R+ ++DVV+W+ +I+G ++G + A +
Sbjct: 420 SGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEI 479
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYL 468
FR M+ S Q + + VL CS + G++ H+ + G T ++D+
Sbjct: 480 FRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLG 539
Query: 469 KCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ G +D+ L + MP + D V W ++ C +G
Sbjct: 540 RAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 200/671 (29%), Positives = 340/671 (50%), Gaps = 39/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S+++G+ +H + K G D+F GN LL Y + L D ++FDEM +++
Sbjct: 14 LKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDV 73
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ ++ + AI L+ M PN +VL C+ D GR IH
Sbjct: 74 VSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHC 133
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + L+ + N L+D+Y KCG + +R++FD+ S N WN++++
Sbjct: 134 YVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER------NGVSWNAIITSLAY 187
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
++ + G + VT +S++ + ++ L LF+F E + +
Sbjct: 188 LERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVE-------LKLFDFGKE---IHGFSL 237
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
G E F +AL+DMY+ +A +F+Q N+ WN+M++ + N
Sbjct: 238 RFG-LESDIFVANALIDMYAKSGRSLQASNVFNQIGE------KNIVSWNAMVANFAQNR 290
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
A+ L+ + + G +S TFT+ L AC + R ++H + +G +D V
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFL--RPGKEIHARAIRTGSSVDLFV 348
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L D+YA+ G + A +F ++ +D V+++ LI+G ++ S + LF +M
Sbjct: 349 SNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGM 407
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ V+ C+ LA+L++GK+VH V++ +L+D Y+KCG ID
Sbjct: 408 KLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGK 467
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F+ +P RD SW +I+G G G AI F+ M + ++ + ++++ VLSAC H GL
Sbjct: 468 VFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGL 527
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE F M+ + ++P HY CMVDLLG+AG ++A +LI +P +PD +W ++L
Sbjct: 528 VEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALL 586
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC H +L AE L P+ Y +LSN+YA G WD ++VRK K G KK
Sbjct: 587 GACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKK 646
Query: 659 -AGMSWIEVSS 668
G SW+++ +
Sbjct: 647 NPGCSWVQIDN 657
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 244/557 (43%), Gaps = 40/557 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L C G+ +HC ++K GL + GN L+ +Y + D+ ++FDE++
Sbjct: 112 IVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS 171
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW ++T+ +R A+ ++ M++ G V+PN +S++L D G+
Sbjct: 172 ERNGVSWNAIITSLAYLERNQDALEMFRLMID-GGVKPNSVTFSSMLPVLVELKLFDFGK 230
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSMLSG 184
IH R LE D + N L+DMY K G R L Q SN + N+ WN+M++
Sbjct: 231 EIHGFSLRFGLESDIFVANALIDMYAKSG---RSL--QASNVFNQIGEKNIVSWNAMVAN 285
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--------- 235
Q + ++ L+ GEI + + N +P + +
Sbjct: 286 FAQ----------NRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHA 335
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
I G F +AL DMY+ C L AR++F S V+ +N +I GY
Sbjct: 336 RAIRTGS-SVDLFVSNALTDMYAKCGCLNLARRVFK------ISLRDEVS-YNILIIGYS 387
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
E++ L + GM +D ++ + AC NL +VHGL V
Sbjct: 388 QTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQ--GKEVHGLAVRKHLHTH 445
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+ + L+D Y + G + A ++F ++P +D +W+ +I+G G ++A LF M
Sbjct: 446 LFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKE 505
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ + +VL CS + GK+ + + + ++D+ + G I++
Sbjct: 506 DGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEE 565
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC- 533
+ L + +P E D W ++ C +G + +A++ +LKP + VLS
Sbjct: 566 AVKLIESLPIEPDANVWGALLGACRIHGYIE--LAHWAAEHLFKLKPQHSGYYSVLSNMY 623
Query: 534 RHAGLVEEAWTIFTSMK 550
AG +EA + MK
Sbjct: 624 AEAGKWDEANQVRKLMK 640
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ +D +TF LKAC + L+ ++HG++ G++ D VG+ L+ Y G +K
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQK--GREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLK 59
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVC 432
+F + ++DVV+W+ +I + HG + A LF +M + S N I SVL VC
Sbjct: 60 DVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC 119
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ L G+Q+H + VK G + + +L+D+Y KCG + D +F + ER+ VSW
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II R ++A+ F+ MI +KPN +TF +L L + I
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIH-GFSLR 238
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+GLE + ++D+ ++G A + ++ K + W +M+ A N +L ++
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMV-ANFAQNRLELAAV 296
Query: 613 IAEQLLATSPEDPSKYVMLSNV 634
+ + E P+ V +NV
Sbjct: 297 DLVRQMQADGEIPNS-VTFTNV 317
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D+ + + C ++KQGK +H ++ L +F N LL Y ++ A K+
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F ++ ++ SW +M+ Y AI L+ M E G VE + Y AVL ACS G
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDG-VEYDSVSYIAVLSACSHGGL 527
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
++ G+ E + + ++ + ++D+ + G
Sbjct: 528 VEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAG 561
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 220/673 (32%), Positives = 360/673 (53%), Gaps = 47/673 (6%)
Query: 10 LRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR C G R + G +H RIIK G+ D +LL MY +L+DA K+FD M ++
Sbjct: 107 LRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 166
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W+T+V++ N A+R++ M++ G VEP+ +V++ C+ G L + R +H
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ITR+ + D L N+LL MY KCG L + ++F++ A N W +M+S
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI------AKKNAVSWTAMISSYN 279
Query: 185 -----GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
K + +F +K G E VTL S++ G I +G ++ F R++
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL----- 334
Query: 238 IIVGCFECSCFTLS-ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + +LS ALV++Y+ C L + + S N+ WNS+IS Y
Sbjct: 335 ------DPNYESLSLALVELYAECGKLSDCETVLRVVSDR------NIVAWNSLISLYAH 382
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYEL 354
+A+ L + + + D++T S++ AC N L+ Q+HG ++ +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK----QIHGHVIRTDVS- 437
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V ++LID+Y++ G+V SA +F+++ + VV W+ ++ G +++G + A LF M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+S ++N+ +V++ CS + SL +GK VH + G K+ T T+LIDMY KCG+++
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLN 556
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F+ M R +VSW+ +I G +GR AI+ F +M++S KPNE+ F+ VLSAC
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H+G VEE F MK +G+ P+ EH+ C +DLL ++G +A + I EMPF D ++W
Sbjct: 617 HSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVW 675
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
S++ C H ++ I L +D Y +LSN+YA G W+ ++R A K
Sbjct: 676 GSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSS 735
Query: 655 GEKK-AGMSWIEV 666
KK G S IE+
Sbjct: 736 NLKKVPGYSAIEI 748
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 223/521 (42%), Gaps = 83/521 (15%)
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
+L+ H+L G + + + ++++ + G D RL+ E D+ + L+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP----DSFMYGVLIKC 74
Query: 150 YVKCG------SLTRKLFDQYSNWAASAYGNV----ALWNSMLSGGKQVHAFCVKRGFEK 199
V C L +L + + + + +V A LS G +VH +K G +
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT----------------------- 236
+ V TSL+ MY + G + D +F+ MP RD+V+W+
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 237 ------------GIIVGCFECSCFTLS--------------------ALVDMYSNCNVLC 264
++ GC E C ++ +L+ MYS C L
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ ++F++ A N W +MIS Y E +E+A+ S + SG+ + T S
Sbjct: 255 SSERIFEKI------AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 325 ALKAC--INLLNFNSRFALQVHGLIVTSGYELDY-IVGSNLIDLYARLGNVKSALELFHR 381
L +C I L+ R VHG V + +Y + L++LYA G + +
Sbjct: 309 VLSSCGLIGLI----REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +++VAW+ LI G+ A LFR M+ + F ++S + C + G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
KQ+H ++ E + SLIDMY K G +D +F + R VV+W ++ G QN
Sbjct: 425 KQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
G + EAI+ F M S L+ NE+TFL V+ AC G +E+
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 204/450 (45%), Gaps = 53/450 (11%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G ++ L++ Y+ +R +F+ + Y + ++ +I V
Sbjct: 25 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF------PYPDSFMYGVLIKCNVWC 78
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYE 353
+ AI L + S I + F S L+AC SR L +VHG I+ G +
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG-----SREHLSVGGKVHGRIIKGGVD 133
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D ++ ++L+ +Y + GN+ A ++F +P +D+VAWS L+ C ++G A +F+ M
Sbjct: 134 DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ + + + SV++ C+ L LR + VH ++ F+ ++ SL+ MY KCG++
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F+ + +++ VSWT +I + +++A+ F EMI+S ++PN +T VLS+C
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC 313
Query: 534 RHAGLVEEAWTIFT-SMKPEYGLEPHLEHY-YCMVDLLGQAGCFDDAEQLI--------- 582
GL+ E ++ +++ E L+P+ E +V+L + G D E ++
Sbjct: 314 GLIGLIREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 583 -------------------------AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
KPD AS + ACE L I +
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+ T D L ++Y+ G DS S V
Sbjct: 432 IRTDVSDEFVQNSLIDMYSKSGSVDSASTV 461
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 226/544 (41%), Gaps = 109/544 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ + C + ++ +S+H +I + D N+LL+MY+ L + ++F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+++A+KN VSWT M+++Y + A+R ++ M++ G +EPN +VL +C L G +
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPNLVTLYSVLSSCGLIGLI 319
Query: 122 DLGRLIHERITREKLE--YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
G+ +H R +L+ Y+++ + L+++Y +CG KL D + + N+ WN
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSL-ALVELYAECG----KLSDCETVLRVVSDRNIVAWN 374
Query: 180 SMLS--------------------------------------------GGKQVHAFCVKR 195
S++S GKQ+H ++
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
E V SLIDMY K G +D +FN + R VV+W ++ G
Sbjct: 435 DVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCG-------------- 479
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
F Q N + EAI+L +++ S +
Sbjct: 480 --------------FSQ------------------------NGNSVEAISLFDYMYHSYL 501
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
++ TF + ++AC ++ + VH ++ SG + D + LID+YA+ G++ +A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEK--GKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAA 558
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F + + +V+WS +I HG A F M+ S N+ + +VL C
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGI 494
S+ GK G ID+ + G++ + K MP D W +
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 495 IVGC 498
+ GC
Sbjct: 679 VNGC 682
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 224/770 (29%), Positives = 361/770 (46%), Gaps = 128/770 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ G+R+ I+ G+ +H + L D +++MYA S +D+ +FD + KN
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W ++++Y+ N+ + + + M+ + P+ F Y V+KAC+ D+ +G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + L D + N L+ Y G +T +LFD N+ WNSM+
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER------NLVSWNSMIRVFS 264
Query: 185 ----------------------------------------------GKQVHAFCVKRGFE 198
GK VH + VK +
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------- 241
KE V +L+DMY KCG I + +F ++VVSW ++ G
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 242 --------------------CF---------ECSCFTL-----------SALVDMYSNCN 261
CF E C++L +A V Y+ C
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS--SGMCIDS 319
L A+++F S ++ WN++I G+ + N+ ++L +H+ SG+ DS
Sbjct: 445 SLSYAQRVFHGIRSKTVNS------WNALIGGHA--QSNDPRLSLDAHLQMKISGLLPDS 496
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+T S L AC L + R +VHG I+ + E D V +++ LY G + + LF
Sbjct: 497 FTVCSLLSACSKLKSL--RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ K +V+W+ +I G ++G A +FR M+ + + V CS L SLR
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G++ HA+ +K E + SLIDMY K G I +F + E+ SW +I+G G
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G AKEAI F+EM ++ P+++TFLGVL+AC H+GL+ E MK +GL+P+L
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+HY C++D+LG+AG D A +++A EM + D IW S+L +C H N ++ +A +L
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
PE P YV+LSN+YA LG W+ + KVR+ ++ K AG SWIE++
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 197/500 (39%), Gaps = 111/500 (22%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + R I GK +H +K L +++ N L+ MY+ + +A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGD 120
KN+VSW TMV +++ + + ML G V+ + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L + +H +++ Y+ ++ N + Y KCGSL+ +++F + ++ W
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS------W 464
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+++ G GK+VH F ++
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL- 253
E++ S++ +Y+ CGE+ ALF+ M ++ +VSW +I G + + F AL
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ-NGFPDRALG 583
Query: 254 -----------------VDMYSNCNVLCEAR----------------------KLFDQYS 274
+ ++ C++L R L D Y+
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 275 -----SWAASAYGNV-----ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ ++ + + A WN+MI GY ++ +EAI L + +G D TF
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF--H 380
L AC + L++ R+ Q+ + G + + + +ID+ R G + AL +
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 381 RLPKKDVVAWSGLIMGCTKH 400
+ DV W L+ C H
Sbjct: 761 MSEEADVGIWKSLLSSCRIH 780
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 42/171 (24%)
Query: 111 VLKACSLSGDLDLGRLIHERIT-REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN- 166
+L+A D+++GR IH+ ++ +L D VL ++ MY CGS +R +FD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 167 ----WAA--SAYGNVALWNSMLSG--------------------------------GKQV 188
W A S+Y L++ +L G V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
H VK G ++ +L+ Y G + D L LF+ MPER++VSW +I
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 221/634 (34%), Positives = 321/634 (50%), Gaps = 90/634 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
++ +L C S + RL+H RI + + + + N L+D+Y KCG L RK+FD
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 166 -----NWAA-----SAYGNV--AL-------------WNSMLSGGKQVHAFCVKRGFEKE 200
+W A + +G + AL WN+M+SG F + FE+
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG------FAQRDRFEE- 134
Query: 201 DVTLTSLIDMYLK---CGEIDDGLALFNFMPERDV---VSWTGIIVGC-FECSCFTLSAL 253
L ++DM+ + E G AL D+ V G+I + + SAL
Sbjct: 135 --ALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
VDMYS C V+ A++ FD N+ WNS+I+ Y N +A+ + + +
Sbjct: 193 VDMYSKCRVVASAQRAFDDMD------VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNC 246
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT-SGYELDYIVGSNLIDLYARLGNV 372
G+ D T S AC +L R LQ+H ++ Y D ++G+ L+D+YA+ V
Sbjct: 247 GIEPDEITLASVASACASLSAI--REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRV 304
Query: 373 KSALELFHRLPKKDVVA-------------------------------WSGLIMGCTKHG 401
A +F R+P +DVV+ W+ LI G T++G
Sbjct: 305 NEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNG 364
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKE 456
N A LF + + + ++L C+ LA L+ G+Q H +K GF E
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDS 424
Query: 457 DITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
DI + SLIDMY+KCG ++DG +F+ M ERD VSW +IVG QNG EA+ F+EM+
Sbjct: 425 DIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREML 484
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
S +P+ +T +GVLSAC HAGLVEE F SM E+GL P +HY CMVDLLG+AGC
Sbjct: 485 VSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCL 544
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A LI MP +PD +W S+L AC+ H N L +AE+LL P + YV+LSN+Y
Sbjct: 545 DEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMY 604
Query: 636 ATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEVSS 668
A LG W + +VRK +++G K+ G SWI + S
Sbjct: 605 AELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQS 638
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 149/585 (25%), Positives = 250/585 (42%), Gaps = 110/585 (18%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L C + +S+ + + +H RIIK S +IF N L+ +Y L DA K+
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG--------------- 105
FD M ++N SW ++ A T + A+ L+ M E N
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 106 ---------------FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+ + + L AC+ DL +G IH I + + D + + L+DMY
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196
Query: 151 VKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAFC--VKRGFEK 199
KC + ++ FD N+ WNS+++ GK + F + G E
Sbjct: 197 SKCRVVASAQRAFDDMD------VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEP 250
Query: 200 EDVTLTS------------------------------------LIDMYLKCGEIDDGLAL 223
+++TL S L+DMY KC +++ +
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ MP RDVVS T ++ G Y+ + + AR +F N
Sbjct: 311 FDRMPLRDVVSETSMVSG---------------YAKASSVKAARLMFSNMME------RN 349
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL----LNFNSRF 339
V WN++I+GY N +NEEA+ L + + YTF + L AC NL L +
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+ HG SG + D VG++LID+Y + G V+ +F R+ ++D V+W+ +I+G +
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDI 458
+G + A +FR+M+ S + + + VL CS + G+ + ++ G
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD 529
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
T ++D+ + G +D+ L + MP E D V W ++ C +G
Sbjct: 530 HYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 40/174 (22%)
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
KHGL R ++ ++ + +L C S+ + VHA +K F E
Sbjct: 2 AKHGL-------VRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEI 54
Query: 458 ITLTSLIDMYLKC-------------------------------GEIDDGLALFKFMPER 486
L+D+Y KC G +D+ L LFK MPER
Sbjct: 55 FIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPER 114
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
D SW ++ G Q R +EA+ + +M NE +F LSAC AGL++
Sbjct: 115 DQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSAC--AGLMD 166
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 204/669 (30%), Positives = 331/669 (49%), Gaps = 76/669 (11%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + R+ Q K LHCRII+ + + F NNL++ Y L +A +FD +
Sbjct: 11 ALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP--- 67
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLI 127
+PN F ++ +L A S G L D+
Sbjct: 68 ---------------------------------QPNLFSWNTLLSAYSKLGYLQDM---- 90
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRK-------LFDQYSNWAASAYGNVALWNS 180
+R+ +D V N+LL Y G ++ L D N + + + +S
Sbjct: 91 -QRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSS 149
Query: 181 ---MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ G+Q+H K G++ + L+DMY K G I+D +F +PE+++V +
Sbjct: 150 NRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNT 209
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I G C + EA +LFD + + W ++I+G N
Sbjct: 210 MITGLLRC---------------RFIVEAEQLFDNMPEKDSIS------WTTIITGLTQN 248
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+EA+ + G C+D +TF S L AC L + Q+H I+ + Y+ +
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDE--GKQIHAYIIRTDYQDNIF 306
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS L+D+Y + NVK A +F ++ K+V++W+ +++G ++G + A +F DM +
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ F + SV+ C+ LASL G Q H + G +LI +Y KCG ++
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
LF M RD VSWT ++ G Q G+A E I+ F+ M+ + P+ +TF+GVLSAC AG
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LVE+ + F M E+ + P +HY CM+DLL +AG ++A+ I +MPF PD WA++
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L +C + N ++ AE L P++P+ Y++LS++YA G WD ++K+RK +++G K
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606
Query: 658 K-AGMSWIE 665
K G SWI+
Sbjct: 607 KEPGHSWIK 615
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 65/282 (23%)
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
M S +T+ALK C N ++H I+ + + + +NLI+ Y +LG++K+
Sbjct: 1 MSSSSNYYTAALKFCCEARNRAQ--VKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKN 58
Query: 375 ALELFHRLPKK-------------------------------DVVAWSGLIMGCTKHGLN 403
A +F +P+ DVV+W+ L+ G +GL
Sbjct: 59 ARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLI 118
Query: 404 SLAYLLFRDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
S + ++ M+ + + ++N+ S++L + S + G+Q+H K G++ +
Sbjct: 119 SESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSP 178
Query: 463 LIDMYLKCGEIDD---------------------GL----------ALFKFMPERDVVSW 491
L+DMY K G I+D GL LF MPE+D +SW
Sbjct: 179 LVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISW 238
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
T II G QNG KEA+ F+EM ++ TF VL+AC
Sbjct: 239 TTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTAC 280
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 31/307 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG ++ +GK +H II+ +IF G+ LL MY ++ A +
Sbjct: 268 MDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M KN++SWT M+ Y N A+R++ M + + P+ F +V+ +C+
Sbjct: 328 FRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM-QRNEIHPDDFTLGSVISSCANLAS 386
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--------KLFDQYSNWAA--S 170
L+ G H + L + N L+ +Y KCGSL K+ D+ S W A S
Sbjct: 387 LEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS-WTALVS 445
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
Y N +S + + G + VT ++ + G ++ G F M +
Sbjct: 446 GYAQFGKANETIS----LFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKE 501
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
++ I + C ++D+ S L EA+ +Q ++ A G W ++
Sbjct: 502 HRIT---PIPDHYTC-------MIDLLSRAGRLEEAKNFINQM-PFSPDAIG----WATL 546
Query: 291 ISGYVLN 297
+S LN
Sbjct: 547 LSSCRLN 553
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/696 (30%), Positives = 340/696 (48%), Gaps = 74/696 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D R V+ + C R GK + II+ G +I+ N L+ +++ ++ +A +
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + K +V+W ++ Y A L+ M++ ++EP+ + VL ACS
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE-AMEPSIITFLIVLDACSSPAG 177
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L LG+ H ++ + D + L+ MYVK GS+ R++FD
Sbjct: 178 LKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD---------------- 221
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLALF------NFMPERD 231
G K DV T +I Y K G+ + LF F P R
Sbjct: 222 -----------------GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNR- 263
Query: 232 VVSWTGIIVGC-----------FECSCFTL---------SALVDMYSNCNVLCEARKLFD 271
+S+ I+ GC C +AL+ MY C + AR++FD
Sbjct: 264 -ISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFD 322
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ +V W MI GY N E+A L + + G+ D T+ + AC +
Sbjct: 323 KMK------VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ + A ++H +V +G+ D +V + L+ +YA+ G +K A ++F + ++DVV+WS
Sbjct: 377 SADLS--LAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWS 434
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I ++G A+ F M +N + + ++L C L +L G +++ +K
Sbjct: 435 AMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA 494
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+LI+M +K G I+ +F+ M +RDVV+W +I G +G A+EA+ F
Sbjct: 495 DLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLF 554
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M++ R +PN +TF+GVLSAC AG VEE F+ + G+ P +E Y CMVDLLG+
Sbjct: 555 DRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGR 614
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG D+AE LI MP KP+ +IW+++L AC + N + AE+ L + P D + YV L
Sbjct: 615 AGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQL 674
Query: 632 SNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
S++YA GMW++++KVRK + G K+ G +WIEV
Sbjct: 675 SHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEV 710
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 217/674 (32%), Positives = 352/674 (52%), Gaps = 44/674 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN- 68
L+ CG I +G +H IIK G +F N+L+SMYA + A KLFD M +N
Sbjct: 17 LKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERND 76
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++++AY+ N + A+ L+ M + G V N + A L+AC S LG IH
Sbjct: 77 VVSWNSIISAYSLNGQCMEALGLFREMQKAG-VGANTYTLVAALQACEDSSFKKLGMEIH 135
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGK 186
I + D + N L+ M+V+ G ++ ++FD+ N+ WNSM++G
Sbjct: 136 AAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE-----KDNIT-WNSMIAGFT 189
Query: 187 Q-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-- 235
Q + FC + ++V+L S++ + G + +G + + + +W
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMK----NWLD 245
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+ + +G + L+DMYS C + A +FD+ + ++ W ++I+ Y
Sbjct: 246 SNLRIG---------NTLIDMYSKCCCVAYAGLVFDKMIN------KDLISWTTVIAAYA 290
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N + EA+ LL + + GM +D+ S L AC L + A +VHG + G D
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSH--AKEVHGYTLKRGLS-D 347
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
++ + +ID+YA GN+ A +F + KDVV+W+ +I +GL + A +F M
Sbjct: 348 LMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKE 407
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ + + + S+L + L++L +GK++H F ++GF E T+ SL+DMY CG +++
Sbjct: 408 TSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLEN 467
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F + +V WT +I G +GR K A+ F M +L P+ ITFL +L AC H
Sbjct: 468 AYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSH 527
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+GL+ E + +MK +Y LEP EHY C+VDLLG+A ++A + M +P +W
Sbjct: 528 SGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWC 587
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
+ L AC H+N KL I A++LL P+ P YV++SNV+A G W + +VR K G
Sbjct: 588 AFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGG 647
Query: 656 EKK-AGMSWIEVSS 668
KK G SWIEV +
Sbjct: 648 LKKNPGCSWIEVGN 661
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 128/536 (23%), Positives = 221/536 (41%), Gaps = 100/536 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL+ C K G +H I+K D++ N L++M+ F ++ A ++FDE+
Sbjct: 115 LVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ ++W +M+ +T N N A++ + L+ +++P+ ++L A G L G+
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCG-LQDANLKPDEVSLISILAASGRLGYLLNGK 233
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSN-----WAA--SAY---- 172
IH + L+ + + NTL+DMY KC + +FD+ N W +AY
Sbjct: 234 EIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNN 293
Query: 173 ------------------------GNVALWNS---MLSGGKQVHAFCVKRGFEKEDVTLT 205
G+ L S LS K+VH + +KRG D+ +
Sbjct: 294 CHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL--SDLMMQ 351
Query: 206 SL-IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
++ ID+Y CG I+ +F + +DVVSWT +I SC+ + L +
Sbjct: 352 NMIIDVYADCGNINYATRMFESIKCKDVVSWTSMI------SCYVHNGLAN--------- 396
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
EA +F Y++ E + E DS T S
Sbjct: 397 EALGVF-----------------------YLMKETSVEP--------------DSITLVS 419
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L A +L N ++HG I G+ L+ ++L+D+YA G++++A ++F
Sbjct: 420 ILSAAASLSALNK--GKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ- 443
K +V W+ +I HG A LF M + + ++L CS + GK+
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ K E L+D+ + +++ K M E W + C
Sbjct: 538 LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGAC 593
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 149/293 (50%), Gaps = 5/293 (1%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ DS+TF LKAC + + + ++HGLI+ GY+ V ++L+ +YA+ ++
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHR--GAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDIL 62
Query: 374 SALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +LF R+ ++ DVV+W+ +I + +G A LFR+M + N + + + L+ C
Sbjct: 63 GARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC 122
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ + G ++HA +K + +L+ M+++ G++ +F + E+D ++W
Sbjct: 123 EDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWN 182
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G QNG EA+ +F + + LKP+E++ + +L+A G + I
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ L+ +L ++D+ + C A + +M K D W +++ A +N
Sbjct: 243 W-LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK-DLISWTTVIAAYAQNN 293
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 42/278 (15%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L G+ + GK +H +K L ++ GN L+ MY+ + A +F
Sbjct: 212 DEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVF 271
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M K+++SWTT++ AY N A++L + G ++ + M + L ACS L
Sbjct: 272 DKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG-MDVDTMMIGSTLLACSGLRCL 330
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY 172
+ +H + L D ++ N ++D+Y CG++ ++F+ +W + S Y
Sbjct: 331 SHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCY 389
Query: 173 GNVALWNSML-------------------------------SGGKQVHAFCVKRGFEKED 201
+ L N L + GK++H F ++GF E
Sbjct: 390 VHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEG 449
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
T+ SL+DMY CG +++ +F + +V WT +I
Sbjct: 450 STVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMI 487
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 285/514 (55%), Gaps = 30/514 (5%)
Query: 159 KLFDQYSNWAASAYG---NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
++ D +A+ Y + L L G +VHA GF V ++DMY+KC
Sbjct: 79 QILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCN 138
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ + LF+ M ERD+ SW +I G Y+ L EARKLFDQ +
Sbjct: 139 SLVNAKRLFDEMAERDLCSWNIMISG---------------YAKAGRLQEARKLFDQMTE 183
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI--HSSGMCIDSYTFTSALKACINLL 333
N + W +M SGYV ++Q+EEA+ L + H + C + +T +SAL A +
Sbjct: 184 -----RDNFS-WTAMTSGYVRHDQHEEALELFRAMQRHENFKC-NKFTMSSALAASAAIQ 236
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ + ++HG I+ G +LD +V S L D+Y + G++ A +F + +DVV+W+ +
Sbjct: 237 SLH--LGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAM 294
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I K G + LF D++ S N+F S VL C+ A+ GKQVH + + GF
Sbjct: 295 IDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGF 354
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ ++L+ MY KCG I + +F MP D+VSWT +I G QNG+ EA+ +F+
Sbjct: 355 DPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFEL 414
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
+++S +P+ ITF+GVLSAC HAGLV++ F S+K ++GL +HY C++DLL ++G
Sbjct: 415 LLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSG 474
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
+AE +I +MP +PDK +WAS+L C H N KL AE L PE+P+ Y L+N
Sbjct: 475 RLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLAN 534
Query: 634 VYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+YAT G+W +++VRK G KK G+SWIE+
Sbjct: 535 IYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEI 568
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 200/504 (39%), Gaps = 133/504 (26%)
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
KR AI++ +H+ P+ YS +L+ C LD G +H V
Sbjct: 71 QKRLREAIQILDHV-----DRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVV 125
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
+ N +LDMY+KC SL ++LFD+ A ++ WN M+SG
Sbjct: 126 ISNRILDMYIKCNSLVNAKRLFDEM------AERDLCSWNIMISG--------------- 164
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------ 241
Y K G + + LF+ M ERD SWT + G
Sbjct: 165 -----------YAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQ 213
Query: 242 ---CFECSCFTL-----------------------------------SALVDMYSNCNVL 263
F+C+ FT+ SAL DMY C +
Sbjct: 214 RHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSI 273
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
EAR +FD+ + +V W +MI Y + EE L S + SG+ + +TF+
Sbjct: 274 GEARHIFDK------TVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFS 327
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
L AC + + QVHG + G++ S L+ +Y + GN+K+A +F+ +P
Sbjct: 328 GVLNACAD--HAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMP 385
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ D+V+W+ LI G ++G A F ++ S + VL C+
Sbjct: 386 RPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACT---------- 435
Query: 444 VHAFCVKRGF-------EKEDITLTS-----LIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
HA V +G EK +T T+ LID+ + G + + + MP E D
Sbjct: 436 -HAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFL 494
Query: 491 WTGIIVGCGQNG------RAKEAI 508
W ++ GC +G RA EA+
Sbjct: 495 WASLLGGCRIHGNLKLAKRAAEAL 518
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 184/476 (38%), Gaps = 139/476 (29%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C Q R++ +G +H G + N +L MY SL +A +LFDEMA +++
Sbjct: 96 LQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDL 155
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE-------------------------------Y 98
SW M++ Y R A +L++ M E +
Sbjct: 156 CSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRH 215
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+ + N F S+ L A + L LG+ IH I R L+ D V+ + L DMY KCGS+
Sbjct: 216 ENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGE 275
Query: 157 TRKLFDQYSN-----WAA---------SAYGNVALWNSMLSG------------------ 184
R +FD+ + W A AL++ +L
Sbjct: 276 ARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACAD 335
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
GKQVH + + GF+ ++L+ MY KCG I + +FN MP D+VSWT +
Sbjct: 336 HAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSL 395
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I G Y N
Sbjct: 396 ISG----------------------------------------------------YAQNG 403
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLNFNSRFALQVHGLIVTSG 351
Q +EA+ + SG D TF L AC + L F+S + HGL T+
Sbjct: 404 QPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDS--IKEKHGLTHTAD 461
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ + LIDL +R G ++ A ++ ++P + D W+ L+ GC HG LA
Sbjct: 462 HY------ACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLA 511
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 40/321 (12%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+S+ GK +H I++ GL D + L MY S+ +A +FD+ +++VSWT M+
Sbjct: 236 QSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMI 295
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y R L++ +L+ G + PN F +S VL AC+ +LG+ +H +TR
Sbjct: 296 DRYFKEGRREEGFALFSDLLKSG-IWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGF 354
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------G 185
+ + +TL+ MY KCG++ R++F+ ++ W S++SG
Sbjct: 355 DPSSFAASTLVHMYTKCGNIKNARRVFN------GMPRPDLVSWTSLISGYAQNGQPDEA 408
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
Q +K G + + +T ++ G +D GL F+ + E+ ++ T C
Sbjct: 409 LQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYAC--- 465
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSS------WAA-----SAYGNVALWNSMISG- 293
L+D+ S L EA + D+ WA+ +GN+ L
Sbjct: 466 -------LIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEAL 518
Query: 294 YVLNEQNEEAITLLSHIHSSG 314
+ + +N T L++I+++
Sbjct: 519 FEIEPENPATYTTLANIYATA 539
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + GK +H + + G F + L+ MY ++ +A ++F+ M R ++
Sbjct: 330 LNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDL 389
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT++++ Y N +P+ A++ + +L+ G+ +P+ + VL AC+ +G +D G +
Sbjct: 390 VSWTSLISGYAQNGQPDEALQFFELLLKSGT-QPDHITFVGVLSACTHAGLVDKGLEYFD 448
Query: 130 RIT-REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
I + L + L+D+ + G L + D+ + LW S+L GG
Sbjct: 449 SIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKM-----PIEPDKFLWASLL-GGC 502
Query: 187 QVHA--FCVKRGFE-------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++H KR E + T T+L ++Y G + M R VV G
Sbjct: 503 RIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPG 562
Query: 238 I 238
+
Sbjct: 563 L 563
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 207/688 (30%), Positives = 349/688 (50%), Gaps = 73/688 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-------LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
C + RS+ QG+ +H ++ L+ + GN+L++MY + + A ++FDEM
Sbjct: 54 CSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMP 113
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW +++ A+ N R A+ L++ ML G+ + F + ++AC+ GD+ GR
Sbjct: 114 ARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA-ADQFALGSAVRACTELGDVGTGR 172
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H + + D ++ N L+ MY K G + LF++ + ++ W S+++
Sbjct: 173 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD------KDLISWGSIIA 226
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLI--------------DMYLKCGEIDD--------GL 221
G Q +GFE E + + + + CG + GL
Sbjct: 227 GFAQ-------QGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 279
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
++ + +RD + VGC +L DMY+ C L AR F + +
Sbjct: 280 SI-KYRLDRD------LYVGC---------SLSDMYARCKNLDSARVAFYRIEA------ 317
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFA 340
++ WNS+++ Y + EA+ L S + SG+ D T L AC+ ++ R
Sbjct: 318 PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRL- 376
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+H +V G + D V ++L+ +YAR ++ SA+++FH + +DVV W+ ++ C +H
Sbjct: 377 --IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 434
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
LF + S +++ +++VL + L KQVHA+ K G + +
Sbjct: 435 NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS 494
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LID Y KCG +DD + LF+ M RDV SW+ +IVG Q G AKEA F M +
Sbjct: 495 NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGI 554
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+PN +TF+GVL+AC G V E ++ M+PEYG+ P EH C+VDLL +AG +A
Sbjct: 555 RPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAA 614
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
I +MPF+PD +W ++L A + HN+ ++ AE +L P + YV+L N+YA G
Sbjct: 615 NFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASG 674
Query: 640 MWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
W+ ++++KA + G KK+ G SW+++
Sbjct: 675 NWNEFARLKKAMRTSGVKKSPGKSWVKL 702
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 233/538 (43%), Gaps = 101/538 (18%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITRE-------KLEYDTVLMNTLLDMYVKCGSL--TR 158
Y+A++ ACS L GR +H + +L +TVL N L+ MY +C + R
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 159 KLFDQYS-----NWAASAYGNV---------ALWNSML-SG------------------- 184
++FD+ +WA+ +V L++SML SG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+QVHA +K + + +L+ MY K G +DDG LF + ++D++SW II
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G F F + AL ++F
Sbjct: 227 G-FAQQGFEMEAL--------------QVF------------------------------ 241
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
E I SH H + + F SA +AC + ++ + Q+HGL + + D VG
Sbjct: 242 REMIVEGSH-HP-----NEFHFGSAFRACGAVGSW--EYGEQIHGLSIKYRLDRDLYVGC 293
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L D+YAR N+ SA F+R+ D+V+W+ ++ + GL S A +LF +M +S
Sbjct: 294 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 353
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ + +L C +L G+ +H++ VK G + + SL+ MY +C ++ + +F
Sbjct: 354 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 413
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ ++DVV+W I+ C Q+ +E + F + +S + I+ VLSA G E
Sbjct: 414 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 473
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + + GL ++D + G DDA +L M D W+S++
Sbjct: 474 MVKQVH-AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLI 530
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 129/631 (20%), Positives = 240/631 (38%), Gaps = 127/631 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+R C + + G+ +H +K D+ N L++MY+ ++D LF+ + K+
Sbjct: 158 AVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKD 217
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SW +++ + A++++ M+ GS PN F + + +AC G + G IH
Sbjct: 218 LISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIH 277
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ +L+ D + +L DMY +C +L Y A ++ WNS+++
Sbjct: 278 GLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAP----DLVSWNSIVNAYSVE 333
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
G+ +H++ VK G + +
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL+ MY +C ++ + +F+ + ++DVV+W I+ C +
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------------------- 433
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ EE + L S ++ S +D + +
Sbjct: 434 --------------------------------HNHPEEVLKLFSLLNKSEPSLDRISLNN 461
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
L A L F QVH +G D ++ + LID YA+ G++ A+ LF +
Sbjct: 462 VLSASAELGYF--EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 519
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+DV +WS LI+G + G A+ LF M + N VL CS + + G
Sbjct: 520 NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 579
Query: 444 VHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
++ + G + ++D+ + G++ + MP E D++ W ++ +
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639
Query: 502 G------RAKEAI---------AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
RA E I AY N F + A R +G+ + +
Sbjct: 640 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 699
Query: 547 TSMKPEYGL-------EPHLEHYYCMVDLLG 570
+K E + P E Y M++L+G
Sbjct: 700 VKLKGELKVFIVEDRSHPESEEIYAMLELIG 730
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDDGLA 478
++++ CS L SL +G++VH V D L LI MY +C D
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MP R+ VSW +I QNGRA +A+ F M++S ++ + AC G
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 539 VEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
V + ++K E G + +++ +V + + G DD L + K D W S+
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIKDK-DLISWGSI 224
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA--TLGMWD 642
+ + +++ P+++ S A +G W+
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWE 271
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/672 (31%), Positives = 343/672 (51%), Gaps = 40/672 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-N 68
L+ CG + + G +H IK G +F N+++ MY LN A +LFD M K +
Sbjct: 187 LKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKED 246
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +M++AY+SN + A+RL+ M + S+ PN + + A L+AC S + G IH
Sbjct: 247 VVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + + + N L+ MY + G + +F +W + WNSMLSG
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW------DTISWNSMLSGFV 359
Query: 187 QVHAFCVKRGF--------EKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
Q + F +K D V + S+I + G G+ + + + + S
Sbjct: 360 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDS--D 417
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ VG ++LVDMY+ + +FD+ +V W ++I+G+ N
Sbjct: 418 LQVG---------NSLVDMYAKFCSMKYMDCIFDKMPD------KDVVSWTTIIAGHAQN 462
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ A+ L + G+ +D +S L AC L +S ++H I+ G D +
Sbjct: 463 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS--VKEIHSYIIRKGLS-DLV 519
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+ + ++D+Y GNV A +F + KDVV+W+ +I +GL + A LF M +
Sbjct: 520 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 579
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + + S+L + L++L++GK++H F +++GF E ++L+DMY +CG ++
Sbjct: 580 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 639
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F F+ +D+V WT +I G +G + AI F+ M + P+ I F+ VL AC H+G
Sbjct: 640 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 699
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L+ E SMK EY LEP EHY C+VDLLG+A ++A Q + M +P +W ++
Sbjct: 700 LMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 759
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC+ H+N +L I A++LL PE+P YV++SNVY+ W + VR K G K
Sbjct: 760 LGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLK 819
Query: 658 K-AGMSWIEVSS 668
K G SWIEV +
Sbjct: 820 KNPGCSWIEVGN 831
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 164/606 (27%), Positives = 294/606 (48%), Gaps = 38/606 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L CG ++++ +G+ +H +I L +F L+ MY L DA KLFD M K
Sbjct: 85 LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 144
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
I +W M+ AY +N P ++ LY M G + + + +LKAC L D G +H
Sbjct: 145 IFTWNAMIGAYVTNGEPLGSLELYREMRVSG-IPLDACTFPCILKACGLLKDRRYGAEVH 203
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+E + N+++ MY KC L R+LFD+ +V WNSM+S
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE-----DVVSWNSMISAYS 258
Query: 185 --GKQVHAFCVKRGFEKEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+ + A + +K + + + C + +F+ + + T ++
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS-------SFIKQGMFIHAT-VLK 310
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+ + F +AL+ MY+ + EA +F W + WNSM+SG+V N
Sbjct: 311 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW------DTISWNSMLSGFVQNGLY 364
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + +G D S + A + N+ +Q+H + +G + D VG+
Sbjct: 365 HEALQFYHEMRDAGQKPDLVAVISIIAASAR--SGNTLHGMQIHAYAMKNGLDSDLQVGN 422
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L+D+YA+ ++K +F ++P KDVV+W+ +I G ++G +S A LFR++ D+
Sbjct: 423 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 482
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLAL 479
+ +ISS+L CS L + K++H++ +++G D+ L + ++D+Y +CG +D +
Sbjct: 483 DVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAARM 540
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + +DVVSWT +I NG A EA+ F M ++ ++P+ I+ + +LSA +
Sbjct: 541 FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSAL 600
Query: 540 EEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ I + + + LE L +VD+ + G + + + + K D +W SM+
Sbjct: 601 KKGKEIHGFLIRKGFVLEGSLAS--TLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMI 657
Query: 599 KACETH 604
A H
Sbjct: 658 NAYGMH 663
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 221/535 (41%), Gaps = 98/535 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL+ C IKQG +H ++K ++F N L++MYA F + +A +F M
Sbjct: 285 FVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD 344
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ +SW +M++ + N + A++ Y+ M + G +P+ +++ A + SG+ G
Sbjct: 345 DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLHGM 403
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSN-----WAASAYG----- 173
IH + L+ D + N+L+DMY K S+ +FD+ + W G
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 463
Query: 174 -------------------NVALWNSML---------SGGKQVHAFCVKRGFEKEDVTLT 205
+V + +S+L S K++H++ +++G + V
Sbjct: 464 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQN 522
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
++D+Y +CG +D +F + +DVVSWT +I SC
Sbjct: 523 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI------SC------------------ 558
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
YV N EA+ L + +G+ DS + S
Sbjct: 559 ----------------------------YVHNGLANEALELFHLMKETGVEPDSISLVSI 590
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L A + ++HG ++ G+ L+ + S L+D+YAR G ++ + +F+ + K
Sbjct: 591 LSA--AASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNK 648
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-V 444
D+V W+ +I HG A LFR M + + + +VL CS + G++ +
Sbjct: 649 DLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFL 708
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + E L+D+ + +++ K M E W ++ C
Sbjct: 709 ESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGAC 763
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 17/310 (5%)
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----QVHGLIVTSG 351
+NE + L ++ S +D ++S L+ C S+ AL QVH ++TS
Sbjct: 56 VNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELC------GSKKALSEGQQVHAHMITSN 108
Query: 352 YELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ + + + L+ +Y + G + A +LF +P K + W+ +I +G + L+
Sbjct: 109 ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 168
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R+M S ++ +LK C L R G +VH +K G+ S++ MY KC
Sbjct: 169 REMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 228
Query: 471 GEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
+++ LF MPE+ DVVSW +I NG++ EA+ F EM ++ L PN TF+
Sbjct: 229 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 288
Query: 530 LSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
L AC + +++ I T +K Y + + + ++ + + G +A + M
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-D 345
Query: 589 PDKTIWASML 598
D W SML
Sbjct: 346 WDTISWNSML 355
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 54/284 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++ + + + G +H +K GL D+ GN+L+ MYA F S+ +F
Sbjct: 382 DLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 441
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M K++VSWTT++ + N + A+ L+ + G ++ + M S++L ACS +
Sbjct: 442 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG-IDLDVMMISSILLACSGLKLI 500
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ IH I R+ L D VL N ++D+Y +CG++ ++F+ + +V W
Sbjct: 501 SSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIE------FKDVVSWT 553
Query: 180 SMLS--------------------------------------------GGKQVHAFCVKR 195
SM+S GK++H F +++
Sbjct: 554 SMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK 613
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
GF E ++L+DMY +CG ++ +FNF+ +D+V WT +I
Sbjct: 614 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 657
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/644 (32%), Positives = 331/644 (51%), Gaps = 70/644 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D +T N ++S YA+ +L +A KLF+E KN ++W+++V+ Y N +R ++ M
Sbjct: 66 RDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM 125
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G +P+ + +VL+ACS L G++IH + +LE + + L+DMY KC
Sbjct: 126 WSDGQ-KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-CVK----RGFEKEDVTLTS 206
L L +Y ++ N W +ML+G G+ + A C K +G E T S
Sbjct: 185 L---LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241
Query: 207 LIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
++ C I + + F + + W+G F + + SALVDMY+ C L
Sbjct: 242 ILT---ACTSI----SAYAFGRQVHGCIIWSG-----FGPNVYVQSALVDMYAKCGDLAS 289
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR + D +V WNSMI G V + EEA+ L +H+ + ID +T+ S
Sbjct: 290 ARMILDTME------IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSV 343
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK+ + N + VH L + +G++ V + L+D+YA+ GN+ AL++F+++ K
Sbjct: 344 LKSLASCKNL--KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DV++W+ L+ G +G + A LF DM + D++QF+++ V C+ L + G+QVH
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A +K SLI MY KCG ++D + +F M R+V+SWT IIVG QNG
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG--- 518
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
LVE + F SM+ YG++P +HY CM
Sbjct: 519 --------------------------------LVETGQSYFESMEKVYGIKPASDHYACM 546
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLLG+AG ++AE L+ M +PD TIW S+L AC H N +L + L+ P +
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN+++ G W+ + +R+A K +G K+ G SWIE+ S
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKS 650
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 144/636 (22%), Positives = 243/636 (38%), Gaps = 152/636 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
LR C + GK +HC IK L +IF L+ MY+ L +A LF + RKN
Sbjct: 141 LRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKN 200
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V WT M+T Y N AI+ + M G +E N F + ++L AC+ GR +H
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQG-MESNHFTFPSILTACTSISAYAFGRQVH 259
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I + + + L+DMY KCG L R + D +V WNSM+ G
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME------IDDVVCWNSMIVGCV 313
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ VH+ +K GF+
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+DMY K G + L +FN + ++DV+SWT ++ G
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTG--------------------- 412
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
YV N +E+A+ L + ++ + +D +
Sbjct: 413 -------------------------------YVHNGFHEKALQLFCDMRTARVDLDQFVV 441
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
AC L F QVH + S ++LI +YA+ G ++ A+ +F +
Sbjct: 442 ACVFSACAELTVI--EFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSM 499
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++V++W+ +I+G ++GL F M +
Sbjct: 500 ETRNVISWTAIIVGYAQNGLVETGQSYFESM----------------------------E 531
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
+V+ G + +ID+ + G+I++ L M E D W ++ C +
Sbjct: 532 KVY------GIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVH 585
Query: 502 GRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
G + + +I +L+P N + ++ + + AG E+A I +MK + + E
Sbjct: 586 GNLELGERAGKNLI--KLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT---MGINKE 640
Query: 561 HYYCMVDLLGQAGCF---DDAEQLIAEMPFKPDKTI 593
Y +++ Q F D + L AE+ K D+ +
Sbjct: 641 PGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMM 676
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 15/246 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++++L C +++K G+S+H IK G N L+ MYA +L+ A +F+++
Sbjct: 343 VLKSLASC---KNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++SWT++VT Y N A++L+ M V+ + F+ + V AC+ ++ GR
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDM-RTARVDLDQFVVACVFSACAELTVIEFGR 458
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNVALW 178
+H + N+L+ MY KCG L ++FD +W A G
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQ-- 516
Query: 179 NSMLSGGKQVHAFCVK-RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWT 236
N ++ G+ K G + +ID+ + G+I++ L N M E D W
Sbjct: 517 NGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWK 576
Query: 237 GIIVGC 242
++ C
Sbjct: 577 SLLSAC 582
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 340/739 (46%), Gaps = 109/739 (14%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H R + GL D+F N LL Y+ L DA +LFD M +N+VSW + ++ Y + R
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 86 NWAIRLYNHMLEYGSVEPNG-----FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ A+ L+ G+ P+G F+ ++ L+AC+ S G +H + L+ +
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG---------NVALWNSM--- 181
+ L+++Y K G + +FD W A G + L+ M
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232
Query: 182 ---------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
+ GG+Q+H + + E + + +LID+Y KC +
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292
Query: 221 LALFNFMPERDVVSWTGIIVG-------------------------CFEC-----SCFTL 250
LF+ M R++VSWT +I G F C SC +L
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352
Query: 251 SA-------------------------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+A L+DMY+ C L EAR +F+ + A +Y
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISY---- 408
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
N+MI GY A+ + + + TF S L + + + Q+HG
Sbjct: 409 --NAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLE--LSKQIHG 464
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
LIV SG LD GS LID+Y++ V A +F + +D+V W+ +I G ++
Sbjct: 465 LIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEE 524
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A LF + S N+F +++ V S LAS+ G+Q HA +K G + + +LID
Sbjct: 525 AVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALID 584
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG I++G LF+ +DV+ W +I Q+G A+EA+ F M + ++PN +T
Sbjct: 585 MYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVT 644
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+ VLSAC HAGLV+E F SMK +Y +EP EHY +V+L G++G A++ I M
Sbjct: 645 FVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERM 704
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +P TIW S+L AC N ++ E L P D V++SN+YA+ G+W
Sbjct: 705 PIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQ 764
Query: 646 KVRKAGKKLG-EKKAGMSW 663
K+R+ G K+ G SW
Sbjct: 765 KLRQGMDCAGVVKEPGYSW 783
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 171/449 (38%), Gaps = 127/449 (28%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG +I QG+ +H +IK L D + N L+ MYA L +A +F+ +A +
Sbjct: 346 LNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDA 405
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+S+ M+ Y A+ ++ M Y S++P+ + ++L S DL+L + IH
Sbjct: 406 ISYNAMIEGYARLGDLTGAVEIFGKM-RYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHG 464
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + D + L+D+Y K + + +F N ++ +WN+M+ G
Sbjct: 465 LIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNR------DMVIWNAMIFGLAQ 518
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+Q HA +K G + +
Sbjct: 519 NERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHI 578
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+LIDMY KCG I++G LF +DV+ W +I
Sbjct: 579 SNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMI------------------------ 614
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
S Y + EEA+ + + +G+ + TF
Sbjct: 615 ----------------------------STYAQHGHAEEALHVFGMMEGAGVEPNYVTFV 646
Query: 324 SALKACIN-------LLNFNS---RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
S L AC + L +FNS ++A++ T Y +++++L+ R G +
Sbjct: 647 SVLSACAHAGLVDEGLHHFNSMKTKYAVEPG----TEHY-------ASVVNLFGRSGKLH 695
Query: 374 SALELFHRLPKKDVVA-WSGLIMGCTKHG 401
+A E R+P + V W L+ C G
Sbjct: 696 AAKEFIERMPIEPVATIWRSLLSACHLFG 724
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 224/770 (29%), Positives = 361/770 (46%), Gaps = 128/770 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ G+R+ I+ G+ +H + L D +++MYA S +D+ +FD + KN
Sbjct: 446 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 505
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W ++++Y+ N+ + + + M+ + P+ F Y V+KAC+ D+ +G +H
Sbjct: 506 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 565
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + L D + N L+ Y G +T +LFD N+ WNSM+
Sbjct: 566 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER------NLVSWNSMIRVFS 619
Query: 185 ----------------------------------------------GKQVHAFCVKRGFE 198
GK VH + VK +
Sbjct: 620 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 679
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------- 241
KE V +L+DMY KCG I + +F ++VVSW ++ G
Sbjct: 680 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 739
Query: 242 --------------------CF---------ECSCFTL-----------SALVDMYSNCN 261
CF E C++L +A V Y+ C
Sbjct: 740 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 799
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS--SGMCIDS 319
L A+++F S ++ WN++I G+ + N+ ++L +H+ SG+ DS
Sbjct: 800 SLSYAQRVFHGIRSKTVNS------WNALIGGHA--QSNDPRLSLDAHLQMKISGLLPDS 851
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+T S L AC L + R +VHG I+ + E D V +++ LY G + + LF
Sbjct: 852 FTVCSLLSACSKLKSL--RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 909
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ K +V+W+ +I G ++G A +FR M+ + + V CS L SLR
Sbjct: 910 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 969
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G++ HA+ +K E + SLIDMY K G I +F + E+ SW +I+G G
Sbjct: 970 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 1029
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G AKEAI F+EM ++ P+++TFLGVL+AC H+GL+ E MK +GL+P+L
Sbjct: 1030 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 1089
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+HY C++D+LG+AG D A +++A EM + D IW S+L +C H N ++ +A +L
Sbjct: 1090 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 1149
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
PE P YV+LSN+YA LG W+ + KVR+ ++ K AG SWIE++
Sbjct: 1150 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 1199
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 195/505 (38%), Gaps = 121/505 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + R I GK +H +K L +++ N L+ MY+ + +A +F
Sbjct: 646 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 705
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGD 120
KN+VSW TMV +++ + + ML G V+ + + C
Sbjct: 706 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 765
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L + +H +++ Y+ ++ N + Y KCGSL+ +++F + ++ W
Sbjct: 766 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS------W 819
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+++ G GK+VH F ++
Sbjct: 820 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 879
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE---------- 244
E++ S++ +Y+ CGE+ ALF+ M ++ +VSW +I G +
Sbjct: 880 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 939
Query: 245 --------------------CSCFTLSAL-------------------------VDMYSN 259
+C L +L +DMY+
Sbjct: 940 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 999
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
+ ++ K+F+ + ++ WN+MI GY ++ +EAI L + +G D
Sbjct: 1000 NGSITQSSKVFNGLKEKSTAS------WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 1053
Query: 320 YTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
TF L AC + L++ R+ Q+ + G + + + +ID+ R G + AL
Sbjct: 1054 LTFLGVLTACNHSGLIHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDKALR 1110
Query: 378 LF--HRLPKKDVVAWSGLIMGCTKH 400
+ + DV W L+ C H
Sbjct: 1111 VVAEEMSEEADVGIWKSLLSSCRIH 1135
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 187/467 (40%), Gaps = 94/467 (20%)
Query: 111 VLKACSLSGDLDLGRLIHERIT-REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN- 166
+L+A D+++GR IH+ ++ +L D VL ++ MY CGS +R +FD +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 167 ----WAA--SAYGNVALWNSMLSG--------------------------------GKQV 188
W A S+Y L++ +L G V
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
H VK G ++ +L+ Y G + D L LF+ MPER++VSW +I F + F
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI-RVFSDNGF 623
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ + ++ G ++ E + A
Sbjct: 624 SEESF------------------------------------LLLGEMMEENGDGAFM--- 644
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
D T + L C VHG V + + ++ + L+D+Y++
Sbjct: 645 --------PDVATLVTVLPVCAREREIG--LGKGVHGWAVKLRLDKELVLNNALMDMYSK 694
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIIS 426
G + +A +F K+VV+W+ ++ G + G + + R M+ +DV ++ I
Sbjct: 695 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 754
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+ + VC + L K++H + +K+ F ++ + + Y KCG + +F + +
Sbjct: 755 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 814
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
V SW +I G Q+ + ++ +M S L P+ T +LSAC
Sbjct: 815 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 861
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 226/747 (30%), Positives = 354/747 (47%), Gaps = 116/747 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +II GL D + N L+++Y+ + A K+F++M +N+V+W+TMV+A +
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGDLDLGR----LIHERITREKLEYD 139
++ ++ PN ++ S+ ++ACS L G GR + + + + + D
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS---GRWMVFQLQSFLVKSRFDRD 182
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVALWNS------------ 180
+ L+D Y+K G++ R +FD W G V + S
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 181 ---------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
L GGKQ+HA ++ G EK+ + LID Y+KCG +
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302
Query: 220 GLALFNFMPERDVVSWTGIIVG-------------------------CFECS-----CFT 249
LF+ MP ++++SWT ++ G F CS C +
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCAS 362
Query: 250 LSAL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L AL +DMY+ C+ L EARK+FD + A +V
Sbjct: 363 LHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIF------AADDV 416
Query: 285 ALWNSMISGYV-LNEQNE--EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
L+N+MI GY L Q E +A+ + + + TF S L+A +L + +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLG--LSK 474
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+HGL+ G LD GS LI +Y+ +K + +F + KD+V W+ + G +
Sbjct: 475 QIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQS 534
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
N A LF ++ S ++F ++ LASL+ G++ H +KRG E
Sbjct: 535 ENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITN 594
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DMY KCG +D F RDVV W +I +G ++A+ ++M+ ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEP 654
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N ITF+GVLSAC HAGLVE+ F M +G+EP EHY CMV LLG+AG ++A +L
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEAREL 713
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I +MP KP +W S+L C N +L AE + + P+D + +LSN+YA+ GMW
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMW 773
Query: 642 DSLSKVRKAGKKLG-EKKAGMSWIEVS 667
KVR+ K G K+ G SWIE++
Sbjct: 774 TDAKKVRERMKFEGVVKEPGRSWIEIN 800
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 240/525 (45%), Gaps = 52/525 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK +H I++YG +D N L+ Y + AHKLFD M KNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWTT+++ Y N A+ L+ M ++G ++P+ F S++L +C+ L+ G +H
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFG-LKPDMFACSSILTSCASLHALEFGTQVHA 374
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ L D+ + N+L+DMY KC LT RK+FD + A +V L+N+M+ G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIF------AADDVVLFNAMIEGYSR 428
Query: 185 -GKQ------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD-GLA------LFNFMPER 230
G Q ++ F R F +L + + + + GL+ +F F
Sbjct: 429 LGTQWELHDALNIFHDMR-FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNL 487
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D+ + + +I +YSNC L ++R +FD+ ++ +WNSM
Sbjct: 488 DIFAGSALIA---------------VYSNCYCLKDSRLVFDEMK------VKDLVIWNSM 526
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
SGYV +NEEA+ L + S D +TF + A NL + + + H ++
Sbjct: 527 FSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASL--QLGQEFHCQLLKR 584
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G E + + + L+D+YA+ G+ + A + F +DVV W+ +I HG A +
Sbjct: 585 GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQML 644
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M+ + N VL CS + G + ++ G E E ++ + +
Sbjct: 645 EKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRA 704
Query: 471 GEIDDGLALFKFMPERD-VVSWTGIIVGCGQNGRAKEAIAYFQEM 514
G +++ L + MP + + W ++ GC + G E Y EM
Sbjct: 705 GRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNV-ELAEYAAEM 748
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 48/352 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L V LR S+ K +H + K+GL+ DIF G+ L+++Y++ L D+ +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFD 513
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM K++V W +M + Y A+ L+ L+ P+ F + ++ A L
Sbjct: 514 EMKVKDLVIWNSMFSGYVQQSENEEALNLFLE-LQLSRDRPDEFTFVDMVTAAGNLASLQ 572
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
LG+ H ++ + LE + + N LLDMY KCGS D + + ++A +V WNS++
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE----DAHKAFDSAASRDVVCWNSVI 628
Query: 183 SG------GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
S G++ K G E +T ++ G ++DGL F M +
Sbjct: 629 SSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
T V +V + L EAR+L ++ + A+ +W S++SG
Sbjct: 689 PETEHYV-----------CMVSLLGRAGRLNEARELIEKMPTKPAA-----IVWRSLLSG 732
Query: 294 -----------------YVLNEQNEEAITLLSHIHSS-GMCIDSYTFTSALK 327
+ + ++ + TLLS+I++S GM D+ +K
Sbjct: 733 CAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMK 784
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 175/470 (37%), Gaps = 114/470 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G +H IK L D + N+L+ MYA L +A K+FD A ++
Sbjct: 357 LTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDV 416
Query: 70 VSWTTMVTAYTSNKRPNW----AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
V + M+ Y S W A+ ++ H + + + P+ + ++L+A + L L +
Sbjct: 417 VLFNAMIEGY-SRLGTQWELHDALNIF-HDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH + + L D + L+ +Y C L +R +FD+ ++ +WNSM S
Sbjct: 475 QIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK------VKDLVIWNSMFS 528
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G G++ H +KRG E
Sbjct: 529 GYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLEC 588
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+L+DMY KCG +D F+ RDVV W +I
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI-------------------- 628
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
S+Y N + + +A+ +L + G+ +
Sbjct: 629 -------------------SSYAN-------------HGEGRKALQMLEKMMCEGIEPNY 656
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
TF L AC + L+ L++ G E + ++ L R G + A EL
Sbjct: 657 ITFVGVLSACSHAGLVED--GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELI 714
Query: 380 HRLPKKD-VVAWSGLIMGCTKHGLNSLA-YLLFRDMINSNQDVNQFIISS 427
++P K + W L+ GC K G LA Y +++ +D F + S
Sbjct: 715 EKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLS 764
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/681 (30%), Positives = 334/681 (49%), Gaps = 77/681 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++ G+ H IK GL +I+ GN LL MYA + DA + F ++
Sbjct: 140 LASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVP 199
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N VS+T M+ + + N A RL+ ML
Sbjct: 200 EPNEVSFTAMMGGLADSDQVNEAFRLFRLML----------------------------- 230
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
R ++ D+V ++++L + + G L D ++ +G
Sbjct: 231 -------RNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG------------ 271
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE- 244
+QVH +K GFE + SL+DMY K G +D +F MPE VVSW +I G +
Sbjct: 272 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 331
Query: 245 -CSCFTLSALVDM-----------YSNCNVLC-------EARKLFDQYSSWAASAYGNVA 285
S + L M Y N V C R++FD SS + S+
Sbjct: 332 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSS----- 386
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN+++SGY NE ++EA+ L + + D T L + ++ QVH
Sbjct: 387 -WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEG--GRQVHA 443
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+ + + D + S LI +Y++ G V+ A +F R+ + D+V W+ ++ G + + L+
Sbjct: 444 VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKE 503
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A+ F+ M +QF ++VL C+ L+SL +G+QVH+ + G+ + ++LID
Sbjct: 504 AFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALID 563
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG++D +F M ++ V+W +I G QNG EA+ +++MI S KP+ IT
Sbjct: 564 MYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGIT 623
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+ VL+AC H+GLV+ IF SM+ E+G+EP ++HY C++D LG+AG +AE LI +M
Sbjct: 624 FVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKM 683
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P K D IW +L +C + + L AE+L P++ + YV+L+N+Y++LG WD
Sbjct: 684 PCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAK 743
Query: 646 KVRK-AGKKLGEKKAGMSWIE 665
VR+ K G SWIE
Sbjct: 744 AVRELMSYNQVVKDPGYSWIE 764
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 202/434 (46%), Gaps = 45/434 (10%)
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
GK +HA ++ + LI+ Y KC ID LF+ MP+RD+ +W I+
Sbjct: 23 AGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAIL---- 78
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
C+A +L D + +A N+ WN++IS N ++A
Sbjct: 79 -----------------GAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKA 121
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ + + G +T S L AC L++ + HG+ + G + + VG+ L+
Sbjct: 122 LGVYYRMSREGFVPTHFTLASVLSACGALVDVEC--GRRCHGISIKIGLDNNIYVGNALL 179
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+YA+ + A++ F +P+ + V+++ ++ G + A+ LFR M+ + V+
Sbjct: 180 GMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSV 239
Query: 424 IISSVLKVCS--------------CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+SSVL VCS L+S G+QVH +K GFE + SL+DMY K
Sbjct: 240 SLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAK 299
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G +D +F MPE VVSW +I G GQ ++ +AI Y Q M +P+EIT++ +
Sbjct: 300 NGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNM 359
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK- 588
L AC +G +E +F M P L + ++ Q +A +L EM F+
Sbjct: 360 LVACIKSGDIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414
Query: 589 --PDKTIWASMLKA 600
PD+T A +L +
Sbjct: 415 VHPDRTTLAIILSS 428
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/764 (28%), Positives = 350/764 (45%), Gaps = 121/764 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR--- 66
L+ C ++ G+++H I+ GL D + +L++MY L A ++FD+M+
Sbjct: 448 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 507
Query: 67 --KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+I W ++ Y + + M E G + P+G+ S VL C+ G
Sbjct: 508 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELG-IRPDGYSLSIVLGICNRLSWYMAG 566
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML 182
R IH I R E D L L+ MY C LF + N + N+ WN M+
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRS-----NIVAWNVMI 621
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
G G+QVH +K F+
Sbjct: 622 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ 681
Query: 199 KEDVTLTSLIDMYLKCGEIDDG-------------------------------LALFNFM 227
+ TSL+ MY K G ++D L L+N M
Sbjct: 682 DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM 741
Query: 228 P--ERDVVSWT--GIIVGC--------------------FECSCFTLSALVDMYSNCNVL 263
E V S+T ++ GC + + SAL+ MY C
Sbjct: 742 KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGST 801
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+A +F +V W SMI+G+ N + ++A+ L + G+ DS T
Sbjct: 802 EDADSVFYTMKER------DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT 855
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S + A + L N +HG + G E D V +L+D+Y++ G +SA +F +P
Sbjct: 856 SVISAGLGLENV--ELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 913
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
K++VAW+ +I + +GL ++ L ++ ++ I++VL S +A+L +GK
Sbjct: 914 NKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT 973
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+HA+ ++ + +LIDMY+KCG + +F+ MP R++V+W +I G G +G
Sbjct: 974 LHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGN 1033
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
+EA+ F+EM +S P+E+TFL ++++C H+G+VEE +F M+ EYG+EP +EHY
Sbjct: 1034 CEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYA 1093
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
+VDLLG+AG DDA I MP D+++W +L AC H N +L ++A+ LL P
Sbjct: 1094 SVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPA 1153
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
S YV L N+Y + MWD + +R + K G KK+ G SWIEV
Sbjct: 1154 RGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEV 1197
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 255/553 (46%), Gaps = 69/553 (12%)
Query: 92 YNHMLEYGSVEPNG------FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
Y+ LE S P+ F + ++LK C+ +L GR IH I L+ D + +
Sbjct: 422 YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATS 481
Query: 146 LLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
L++MYVKCG L L FD+ S SA ++ +WN
Sbjct: 482 LINMYVKCGLLGSALQVFDKMSESRDSA-PDITVWN------------------------ 516
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDV----------------VSW--TG------II 239
+ID Y K G ++GLA F M E + +SW G II
Sbjct: 517 --PVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYII 574
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
FE + +AL+ MYS+C+ EA LF + + + N+ WN MI G+V N
Sbjct: 575 RNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRS-----NIVAWNVMIGGFVENGM 629
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
E+++ L S + + S +FT A AC + + F QVH ++ ++ D V
Sbjct: 630 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD--FGRQVHCDVIKMNFQDDPYVC 687
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++L+ +YA+ G+V+ A ++F ++ K+V + +I +G A L+ M
Sbjct: 688 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 747
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
V+ F ISS+L CS + S G+ VHA +KR + ++L+ MY KCG +D ++
Sbjct: 748 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 807
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F M ERDVV+W +I G QN R K+A+ F+ M + +K + V+SA V
Sbjct: 808 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 867
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E I + GLE + +VD+ + G + AE + + MP K + W SM+
Sbjct: 868 ELGHLIH-GFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK-NLVAWNSMI- 924
Query: 600 ACETHNNTKLVSI 612
+C + N +SI
Sbjct: 925 SCYSWNGLPEMSI 937
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/539 (24%), Positives = 221/539 (41%), Gaps = 111/539 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A C + G+ +HC +IK D + +LL+MYA S+ DA K+FD++ K
Sbjct: 655 AFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKE 714
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ M++A+ N R A+ LYN M + G + F S++L CS+ G D GR +H
Sbjct: 715 VELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 773
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + ++ + + + LL MY KCGS D S + +V W SM++G
Sbjct: 774 AEVIKRSMQSNVAIQSALLTMYYKCGSTE----DADSVFYTMKERDVVAWGSMIAGFCQN 829
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
G +H F +KRG E +
Sbjct: 830 RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVA 889
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL+DMY K G + +F+ MP +++V+W +I SC++
Sbjct: 890 CSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI------SCYS--------------- 928
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
WN + E +I LL I G +DS + T+
Sbjct: 929 ----------------------WNGL---------PEMSINLLPQILQHGFYLDSVSITT 957
Query: 325 ALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
L A + LL + A Q+ I + D V + LID+Y + G +K A +F
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQIPS-----DLQVENALIDMYVKCGCLKYAQLIFEN 1012
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P++++V W+ +I G HG A LF++M S ++ +++ CS + G
Sbjct: 1013 MPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEG 1072
Query: 442 KQVHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ ++ G E S++D+ + G +DD + + MP + D W ++ C
Sbjct: 1073 LNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFAC 1131
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 147/305 (48%), Gaps = 17/305 (5%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVT 349
I V + +A+ L S S + +TF S LK C +L N ++ R +H IVT
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGR---TIHASIVT 469
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-----KDVVAWSGLIMGCTKHGLNS 404
G + D + ++LI++Y + G + SAL++F ++ + D+ W+ +I G K+G
Sbjct: 470 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 529
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
F M + + +S VL +C+ L+ G+Q+H + ++ FE + T+LI
Sbjct: 530 EGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALI 589
Query: 465 DMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
MY C + +LF + R ++V+W +I G +NG ++++ + K
Sbjct: 590 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS 649
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQ 580
+F G +AC H +++ + +K + +P Y C ++ + ++G +DA++
Sbjct: 650 ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDP----YVCTSLLTMYAKSGSVEDAKK 705
Query: 581 LIAEM 585
+ ++
Sbjct: 706 VFDQV 710
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 163/453 (35%), Gaps = 119/453 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L C S G+++H +IK + ++ + LL+MY S DA +
Sbjct: 748 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 807
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +++V+W +M+ + N+R A+ L+ M + G + M S + L +
Sbjct: 808 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE-N 866
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALW 178
++LG LIH + LE D + +L+DMY K G +F N N+ W
Sbjct: 867 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN------KNLVAW 920
Query: 179 NSMLS--------------------------------------------GGKQVHAFCVK 194
NSM+S GK +HA+ ++
Sbjct: 921 NSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIR 980
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
+ +LIDMY+KCG + +F MP R++V+W +I G
Sbjct: 981 LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAG------------Y 1028
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+ NC EEA+ L + S
Sbjct: 1029 GSHGNC----------------------------------------EEAVRLFKEMKRSE 1048
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYAR 368
D TF + + +C S + GL + ++Y V ++++DL R
Sbjct: 1049 TAPDEVTFLALITSC-------SHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGR 1101
Query: 369 LGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G + A +P D W L+ C H
Sbjct: 1102 AGRLDDAYSFIRGMPIDADRSVWLCLLFACRAH 1134
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 345 GLIVTSGYELDYIVGS-----------NLIDLYARLGNVK-SALELFHRL------PKKD 386
G+ + SG +LD I+GS + A+ NVK L R+ PKK
Sbjct: 341 GIRLGSGEKLDDILGSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKKA 400
Query: 387 VVAWSGL-----IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
V+ L I + G S A L +S +F S+LK C+ L++L G
Sbjct: 401 VLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHG 460
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-----DVVSWTGIIV 496
+ +HA V G + + TSLI+MY+KCG + L +F M E D+ W +I
Sbjct: 461 RTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVID 520
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
G + G +E +A F M + ++P+ + VL C
Sbjct: 521 GYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGIC 557
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/662 (31%), Positives = 344/662 (51%), Gaps = 42/662 (6%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ K LH ++ G +Q IF L++ YA + A FD++ K++ +W +M++A
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y + A+ +N L ++ + + + V++AC G+LD GR +H + + E
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFEC 172
Query: 139 DTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFC 192
D + + + Y + G SL LFD ++ WN+M+SG GK A
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNM------MIRDIGTWNAMISGFYLNGKVAEALE 226
Query: 193 VK-----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
V + + VT++SL+ + ++ +I G+ + + I +G E
Sbjct: 227 VFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVY----------AIKLG-LEFDL 275
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F +AL++MY+ L A +F+Q ++ WNS+++ + N++ A+ +
Sbjct: 276 FVCNALINMYAKFGELRSAETIFNQMK------VRDIVSWNSLLAAFEQNKKPVIALGVY 329
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLY 366
+ +HS G+ D T S L NF S + +HG + + L D +G+ +ID+Y
Sbjct: 330 NKMHSIGVVPDLLTLVSLASVAAELGNFLS--SRSIHGFVTRRCWFLHDIALGNAIIDMY 387
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQFII 425
A+LG + SA ++F LP KDV++W+ LI G +++GL + A ++ M S NQ
Sbjct: 388 AKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTW 447
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S+L S L +L++G + H +K + T L+DMY KCG++ D L+LF +P
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH 507
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+ VSW II G +G +A+ F+EM +KP+ ITF+ +LSAC H+GLV+E
Sbjct: 508 QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWC 567
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M+ YG+ P L+HY CMVDL G+AG + A + MP +PD ++W ++L AC H
Sbjct: 568 FQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHE 627
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
N +LV +++ LL E+ YV+LSN+YA LG W+ + +VR + G KK G S I
Sbjct: 628 NVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687
Query: 665 EV 666
EV
Sbjct: 688 EV 689
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 221/544 (40%), Gaps = 124/544 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG ++ G+ +HC ++K G D++ + + Y+ F ++ A LFD M ++I
Sbjct: 149 IRACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDI 205
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W M++ + N + A+ +++ M + SV + S++L C D+ G LIH
Sbjct: 206 GTWNAMISGFYLNGKVAEALEVFDEM-RFKSVSMDSVTISSLLPICVQLDDIISGVLIHV 264
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ LE+D + N L++MY K G L +F+Q ++ WNS+L+ +Q
Sbjct: 265 YAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMK------VRDIVSWNSLLAAFEQ 318
Query: 188 --------------------------------------------VHAFCVKRGFEKEDVT 203
+H F +R + D+
Sbjct: 319 NKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIA 378
Query: 204 L-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
L ++IDMY K G ID +F +P +DV+SW +I G YS +
Sbjct: 379 LGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITG---------------YSQNGL 423
Query: 263 LCEARKLFDQYSS--WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
EA D YSS + + A N W S+++ HS
Sbjct: 424 ANEA---IDVYSSMRYYSGAVPNQGTWVSILTA-----------------HSQ------- 456
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
ALK ++ HG ++ + D V + L+D+Y + G + AL LF+
Sbjct: 457 --LGALKQ-----------GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFY 503
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+P + V+W+ +I HG A LF++M + + S+L CS +
Sbjct: 504 EVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDE 563
Query: 441 GKQVHAFCVKRGFEKEDITLT-----SLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGI 494
G+ +C + E I + ++D++ + G ++ K MP R DV W +
Sbjct: 564 GQ----WCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGAL 619
Query: 495 IVGC 498
+ C
Sbjct: 620 LGAC 623
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 178/444 (40%), Gaps = 99/444 (22%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD I L C Q I G +H IK GL D+F N L++MYA F L A +
Sbjct: 238 MDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETI 297
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M ++IVSW +++ A+ NK+P A+ +YN M G V P+ ++ + G+
Sbjct: 298 FNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV-PDLLTLVSLASVAAELGN 356
Query: 121 LDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL--TRKLF---------------- 161
R IH +TR +D L N ++DMY K G + RK+F
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLIT 416
Query: 162 ------------DQYSN--WAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFE 198
D YS+ + + A N W S+L+ G + H +K
Sbjct: 417 GYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLY 476
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ T L+DMY KCG++ D L+LF +P + VSW II SC L
Sbjct: 477 FDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAII------SCHGL-------- 522
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
GY L +A+ L + S G+ D
Sbjct: 523 ---------------------------------HGYGL-----KAVKLFKEMQSEGVKPD 544
Query: 319 SYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
TF S L AC + L ++ Q+ + T G ++DL+ R G+++ A
Sbjct: 545 HITFVSLLSACSHSGLVDEGQWCFQL--MQETYGIRPSLKHYGCMVDLFGRAGHLEKAFN 602
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKH 400
+P + DV W L+ C H
Sbjct: 603 FVKNMPVRPDVSVWGALLGACRIH 626
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 346/695 (49%), Gaps = 77/695 (11%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN----- 82
R+ +DI+T N +L Y + L DAH LF EM +NIVSW T+++A T N
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGA 120
Query: 83 -------KR----------------PNWAIRLY-------NHMLEYGSV-EPNGFMYSAV 111
+R N + +Y + + +G V EPN ++A+
Sbjct: 121 LVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAM 180
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA 171
+ + S ++ + + R ++ D+V ++++L + + G L D ++
Sbjct: 181 MGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDV 240
Query: 172 YGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+G +QVH +K GFE + SL+DMY K G +D +F MPE
Sbjct: 241 HG------------QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVS 288
Query: 232 VVSWTGIIVGCFE--CSCFTLSALVDM-----------YSNCNVLC-------EARKLFD 271
VVSW +I G + S + L M Y N V C R++FD
Sbjct: 289 VVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFD 348
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
SS + S+ WN+++SGY NE ++EA+ L + + D T L +
Sbjct: 349 GMSSPSLSS------WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 402
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
++ QVH + + + D + S LI +Y++ G V+ A +F R+ + D+V W+
Sbjct: 403 MMLLEG--GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWN 460
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ G + + L+ A+ F+ M +QF ++VL C+ L+SL +G+QVH+ +
Sbjct: 461 SMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE 520
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+ + ++LIDMY KCG++D +F M ++ V+W +I G QNG EA+ +
Sbjct: 521 GYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLY 580
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
++MI S KP+ ITF+ VL+AC H+GLV+ IF SM+ E+G+EP ++HY C++D LG+
Sbjct: 581 EDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGR 640
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG +AE LI +MP K D IW +L +C + + L AE+L P++ + YV+L
Sbjct: 641 AGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLL 700
Query: 632 SNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIE 665
+N+Y++LG WD VR+ K G SWIE
Sbjct: 701 ANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIE 735
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 186/458 (40%), Gaps = 91/458 (19%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ +HC IK+G D+ N+LL MYA +++ A +F M ++VSW M+ Y
Sbjct: 241 HGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYG 300
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ + AI Y ++Y EP+ Y +L AC SGD++ GR + + ++ L
Sbjct: 301 QKSQSSKAIE-YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSS-- 357
Query: 141 VLMNTLLDMYVKCGSLTR--KLFD--QYSNWAASAYGNVALWNS-----MLSGGKQVHAF 191
NT+L Y + + KLF Q+ + + +S +L GG+QVHA
Sbjct: 358 --WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV 415
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------- 241
K F + + LI MY KCG+++ +F+ + E D+V W ++ G
Sbjct: 416 SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEA 475
Query: 242 ---------------------CFECSCFTLSAL-------------------------VD 255
C C LS+L +D
Sbjct: 476 FTFFKKMREKGMFPSQFSYATVLSC-CAKLSSLSQGRQVHSQIAREGYMNDAFVGSALID 534
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C + AR +FD N WN MI GY N +EA+ L + SG
Sbjct: 535 MYSKCGDVDAARWVFDMMLG------KNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE 588
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARL 369
D TF + L AC S L G+ + + + ++ V + +ID R
Sbjct: 589 KPDGITFVAVLTAC-------SHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRA 641
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
G + A L ++P K D + W L+ C + SLA
Sbjct: 642 GRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLA 679
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H ++ S D + + LI+ YA+ + ++ LF ++PK+D+ W+ ++ K
Sbjct: 27 IHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASE 86
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLK--VCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
A++LF +M N +IS++ + C L + G++ H +K G +
Sbjct: 87 LEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVG 146
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+L+ MY KC I D + F +PE + VS+T ++ G + + EA F+ M+++R+
Sbjct: 147 NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIH 206
Query: 521 PNEITFLGVLSACRHAGLVE----EAWTIFTS---------MKPEYGLEPHLEHYYCMVD 567
+ ++ VL C G E ++ + +S + ++G E L ++D
Sbjct: 207 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLD 266
Query: 568 LLGQAGCFDDAEQLIAEMP----------------------------------FKPDKTI 593
+ + G D AE + MP F+PD+
Sbjct: 267 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 326
Query: 594 WASMLKAC 601
+ +ML AC
Sbjct: 327 YVNMLVAC 334
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 135/318 (42%), Gaps = 40/318 (12%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ G+ +H K DI+ + L+ MY+ + A ++FD +A +IV W +M+
Sbjct: 406 LEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAG 465
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+ N A + M E G + P+ F Y+ VL C+ L GR +H +I RE
Sbjct: 466 LSLNSLDKEAFTFFKKMREKG-MFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMN 524
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ--------- 187
D + + L+DMY KCG + R +FD N WN M+ G Q
Sbjct: 525 DAFVGSALIDMYSKCGDVDAARWVFDMMLG------KNTVTWNEMIHGYAQNGCGDEAVL 578
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
++ + G + + +T +++ G +D G+ +FN M + V +V + C
Sbjct: 579 LYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE---PLVDHYTC-- 633
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AASAYGNVALWNSMISG-YV 295
++D L EA L D+ W + Y +V+L +
Sbjct: 634 -----IIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFH 688
Query: 296 LNEQNEEAITLLSHIHSS 313
L+ QN LL++I+SS
Sbjct: 689 LDPQNSAPYVLLANIYSS 706
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + S+ QG+ +H +I + G D F G+ L+ MY+ ++ A +FD M KN V+W
Sbjct: 501 CAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTW 560
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+ Y N + A+ LY M+ G +P+G + AVL ACS SG +D G I +
Sbjct: 561 NEMIHGYAQNGCGDEAVLLYEDMIGSGE-KPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 619
Query: 133 RE 134
+E
Sbjct: 620 QE 621
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
++S+L+ C + GK +HA ++ + LI+ Y KC ID LF MP
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG----LVE 540
+RD+ +W I+ + ++A F EM + N +++ ++SA G LV+
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPER----NIVSWNTLISALTRNGACGALVD 123
Query: 541 -EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E + + GL+ ++ ++ + + C DA Q ++P +P++ + +M+
Sbjct: 124 VECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVP-EPNEVSFTAMM 181
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 337/711 (47%), Gaps = 113/711 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V+ + C RS+ Q LH ++ K G+ D F L S+YA SL A K+FDE
Sbjct: 7 LVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N+ W + + +Y K+ +RL++ M+ P+ F LKAC+ L+LG+
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 126 LIHERITR-EKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML 182
+IH + +++ D + + L+++Y KCG + K+F+++ + LW SM+
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQR------PDTVLWTSMV 177
Query: 183 SGGKQ---------------------------------------------VHAFCVKRGF 197
+G +Q VH ++R F
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREF 237
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ + + SL+++Y K G LF+ MPE+DV+SW+ +I
Sbjct: 238 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI------------------ 279
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+ Y N NE EA+ L +
Sbjct: 280 ---------------------ACYAN-------------NEAANEALNLFHEMIEKRFEP 305
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+S T SAL+AC ++ N ++H + V G+ELD+ V + LID+Y + A++
Sbjct: 306 NSVTVVSALQACA--VSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
LF RLPKKDVV+W L+ G ++G+ + +FR+M++ + + +L S L
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 423
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
++ +H + V+ GF SLI++Y KCG + D + LFK M RDVV W+ +I
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483
Query: 498 CGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G +GR EA+ F +M++ S ++PN +TFL +LSAC HAGLVEE IF M +Y L
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLR 543
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P EH+ MVDLLG+ G A +I MP +W ++L AC H+N ++ A+
Sbjct: 544 PDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKN 603
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
L P Y++LSN+YA G WD+++++R K+ G KK G S +EV
Sbjct: 604 LFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEV 654
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 214/381 (56%), Gaps = 3/381 (0%)
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
LWN MI G+ + + ++ L S + G+ D + F ALK+C L + + H
Sbjct: 785 LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQH- 843
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+V G D V + L+D+YA+ G++++A +F ++ +D+V+W+ +I G +G NS
Sbjct: 844 -LVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSE 902
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
F M +S N+ I SVL C L +LR+G+ H++ ++ GFE + + T+++D
Sbjct: 903 TLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMD 962
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG +D LF +D+V W+ +I G +G ++AI F +M+++ ++P+ +T
Sbjct: 963 MYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVT 1022
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F VLSAC H+GL+EE F M E+ + L +Y CMVDLLG+AG +A LI M
Sbjct: 1023 FTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P +PD +IW S+L AC HNN L IA+ L P +V+LSN+YA W+ +
Sbjct: 1083 PVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVE 1142
Query: 646 KVRKAGKKLGEKK-AGMSWIE 665
KVRK + G K G S +E
Sbjct: 1143 KVRKMMARRGANKIQGFSLVE 1163
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 174/743 (23%), Positives = 290/743 (39%), Gaps = 125/743 (16%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V + C Q ++K G +H +I+ D+ N+LL++YA A L
Sbjct: 204 LDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANL 263
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M K+++SW+TM+ Y +N+ N A+ L++ M+E EPN + L+AC++S +
Sbjct: 264 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE-KRFEPNSVTVVSALQACAVSRN 322
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NWAA---- 169
L+ G+ IH+ + E D + L+DMY+KC LF + +W A
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382
Query: 170 -----SAYGNVALWNSMLSGGKQ------------------------VHAFCVKRGFEKE 200
AY ++ ++ +MLS G Q +H + V+ GF
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--GCFECSCFTLSALVDMYS 258
SLI++Y KCG + D + LF M RDVV W+ +I G L M
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502
Query: 259 NCNVLCEARKLFDQYS--SWAASAYGNVALWNSMISGYVLNEQNEE---AITLLSHIHSS 313
N V S S A + +++ M+ Y L +E + LL I
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQL 562
Query: 314 GMCID----------SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
G +D + + + L AC N A + + + YI+ SN+
Sbjct: 563 GKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNI- 621
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL------------------ 405
YA G + EL R+ ++ + G M + G++S
Sbjct: 622 --YAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLR 679
Query: 406 -----------------------AYLLFRDMINSNQDVNQFIISSV-LKVCSCLASLRRG 441
A L F I + + + I S+ SC + L
Sbjct: 680 KLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCL--- 736
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K+ HA G + + LT MY+ ID +F+ +P W +I G +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
GR ++ + +M++ LKP++ F L +C AGL + ++ + HL
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AGL--------SDLQRGKVIHQHLVC 846
Query: 562 YYCMVDLLGQAGCFD--------DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
C DL A D +A +L+ + D W SM+ HN ++
Sbjct: 847 CGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG-YAHNGYNSETLG 905
Query: 614 AEQLLATSPEDPSKYVMLSNVYA 636
L+ +S P++ +LS + A
Sbjct: 906 FFDLMRSSGVIPNRVSILSVLLA 928
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 4/278 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
+ H I G + D + + +Y + +A +F +P W+ +I G G
Sbjct: 738 KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
+ L+ M+ ++F LK C+ L+ L+RGK +H V G +
Sbjct: 798 RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DMY KCG+I+ +F M RD+VSWT +I G NG E + +F M S + P
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 522 NEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N ++ L VL AC + G + + W F S + G E + ++D+ + G D A
Sbjct: 918 NRVSILSVLLACGNLGALRKGEW--FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
L E K D W++M+ + H + + + +Q++
Sbjct: 976 LFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMV 1012
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 33/313 (10%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C +++GK +H ++ G S D+F L+ MYA + A +FD+MA ++
Sbjct: 824 ALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRD 883
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT+M++ Y N + + ++ M G + PN +VL AC G L G H
Sbjct: 884 LVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI-PNRVSILSVLLACGNLGALRKGEWFH 942
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLS--- 183
+ + E+D ++ ++DMY KCGS L R LFD+ +A ++ W++M++
Sbjct: 943 SYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE------TAGKDLVCWSAMIASYG 996
Query: 184 ----GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
G K + F VK G VT T ++ G +++G F M E V++
Sbjct: 997 IHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKL 1056
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
C +VD+ L EA L + + ++W S++ ++
Sbjct: 1057 SNYAC----------MVDLLGRAGQLSEAVDLIENM-----PVEPDASIWGSLLGACRIH 1101
Query: 298 EQNEEAITLLSHI 310
+ A + H+
Sbjct: 1102 NNLDLAEKIADHL 1114
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 161/431 (37%), Gaps = 119/431 (27%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K H +I YGL D MY F ++ A +F+++ W M+ + ++
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
R ++ LY+ M+E G ++P+ F + LK+C+ DL G++IH+ + D +
Sbjct: 797 GRFLSSLELYSKMMEKG-LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------------- 184
L+DMY KCG + R +FD+ A ++ W SM+SG
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKM------AVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
G+ H++ ++ GFE + + T+++DMY KCG
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+D LF+ +D+V W+ +I
Sbjct: 970 LDLARCLFDETAGKDLVCWSAMI------------------------------------- 992
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ Y ++ +AI L + +G+ TFT L AC
Sbjct: 993 ---------------ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC------- 1030
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVA 389
S L G + ++++ L +DL R G + A++L +P + D
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090
Query: 390 WSGLIMGCTKH 400
W L+ C H
Sbjct: 1091 WGSLLGACRIH 1101
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+ L CG ++++G+ H +I+ G DI ++ MY+ SL+ A LFDE A
Sbjct: 922 ILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETA 981
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++V W+ M+ +Y + AI L++ M++ G V P+ ++ VL ACS SG L+ G+
Sbjct: 982 GKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAG-VRPSHVTFTCVLSACSHSGLLEEGK 1040
Query: 126 LIHERITREKLEYDTVLMN--TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+ + +T E+ L N ++D+ + G L+ + D N + ++W S+L
Sbjct: 1041 MYFQLMT-EEFVIARKLSNYACMVDLLGRAGQLSEAV-DLIENMPVEP--DASIWGSLL- 1095
Query: 184 GGKQVH 189
G ++H
Sbjct: 1096 GACRIH 1101
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 226/748 (30%), Positives = 350/748 (46%), Gaps = 98/748 (13%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++ QG+ LH ++K LS F L+ MY SL DA K+FDEM+ + I SW
Sbjct: 56 CVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ A+ S+ + AI LY M G V + + +VLKAC G+ LG IH
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLG-VAIDACTFPSVLKACGALGESRLGAEIHGVAV 172
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFD---------------------------- 162
+ + N L+ MY KCG L R LFD
Sbjct: 173 KCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEA 232
Query: 163 -------QYSNWAASAYGNVALWN-----SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
Q A++ Y VA S + G +H +K + +LI M
Sbjct: 233 LSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAM 292
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT--LSALVDM---------YSN 259
Y KCG ++D +F M RD VSW ++ G + ++ L+ DM S
Sbjct: 293 YAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSV 352
Query: 260 CNVLCEARK----------------------------LFDQYSSWAASAYGNVAL----- 286
N++ + + L D Y+ Y A
Sbjct: 353 LNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHE 412
Query: 287 -----WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
W ++I+GY NE + EAI L + GM +D S L+AC L + N F
Sbjct: 413 KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRN--FIR 470
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
++HG + D ++ + ++++Y +G++ A F + KD+V+W+ +I C +G
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNG 529
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L A LF + +N + I S L + L+SL++GK++H F +++GF E +
Sbjct: 530 LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS 589
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL+DMY CG +++ +F + +RD++ WT +I G +G +AIA F++M + P
Sbjct: 590 SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIP 649
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ ITFL +L AC H+GL+ E F MK Y LEP EHY CMVDLL ++ ++A
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHF 709
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
+ MP KP IW ++L AC H+N +L + A++LL + E+ KY ++SN++A G W
Sbjct: 710 VRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRW 769
Query: 642 DSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+ + +VR K G KK G SWIEV +
Sbjct: 770 NDVEEVRLRMKGNGLKKNPGCSWIEVDN 797
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/555 (21%), Positives = 225/555 (40%), Gaps = 102/555 (18%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL+ +K G +H ++K D++ N L++MYA + DA ++F+ M
Sbjct: 252 VAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLC 311
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++ VSW T+++ N+ + A+ + M G +P+ ++ A SG+L G+
Sbjct: 312 RDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ-KPDQVSVLNLIAASGRSGNLLKGKE 370
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCG-------------------------------- 154
+H R L+ + + NTL+DMY KC
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEF 430
Query: 155 -----SLTRKLFDQYSNWAASAYGNVALWNSMLSGG---KQVHAFCVKRGFEKEDVTL-T 205
+L RK+ + + G+V S L +++H + KR D+ L
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL--ADIMLQN 488
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+++++Y + G ID F + +D+VSWT +I C
Sbjct: 489 AIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCC----------------------- 525
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
V N EA+ L + + + DS SA
Sbjct: 526 -----------------------------VHNGLPVEALELFYSLKQTNIQPDSIAIISA 556
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L A NL + ++HG ++ G+ L+ + S+L+D+YA G V+++ ++FH + ++
Sbjct: 557 LSATANLSSLKK--GKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQR 614
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D++ W+ +I HG + A LF+ M + N + ++L CS + GK+
Sbjct: 615 DLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFF 674
Query: 446 AFCVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGCGQNG 502
+K G++ E ++D+ + +++ + MP + W ++ C +
Sbjct: 675 EI-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHS 733
Query: 503 RAKEAIAYFQEMIQS 517
+ +E++QS
Sbjct: 734 NKELGELAAKELLQS 748
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S +L +C +L +G+Q+HA +K T L+ MY KCG + D + +F M E
Sbjct: 50 SLLLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSE 107
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
R + SW ++ +G+ EAI +++M + + TF VL AC G
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG 159
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 343/691 (49%), Gaps = 69/691 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+++ L H Q+R++ G+++H +II+ G S I N L++ YA L AH +F+ +
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 66 RKNIVSWTTMVTAYTSN---KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
K++VSW +++T Y+ N ++L+ M + PN + + + KA S
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSST 135
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
+GR H + + D + +L+ MY K G + D +A N W++M+
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVE----DGLKVFAYMPERNTYTWSTMV 191
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN-FMPERDVVS-----WT 236
SG Y G +++ + +FN F+ E++ S +T
Sbjct: 192 SG--------------------------YATRGRVEEAIKVFNLFLREKEEGSDSDYVFT 225
Query: 237 GII--------VGC-FECSCFTL-----------SALVDMYSNCNVLCEARKLFDQYSSW 276
++ VG + C T+ +ALV MYS C L EA K+FD
Sbjct: 226 AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD----- 280
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+S N W++M++GY N ++ EA+ L S + S+G+ YT L AC ++
Sbjct: 281 -SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
Q+H ++ G+E + L+D+YA+ G + A + F L ++DV W+ LI G
Sbjct: 340 E--GKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++ N A +L+R M + N ++SVLK CS LA+L GKQVH +K GF E
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++L MY KCG ++DG +F+ P +DVVSW +I G NG+ EA+ F+EM+
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
++P+++TF+ ++SAC H G VE W F M + GL+P ++HY CMVDLL +AG
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+A++ I +W +L AC+ H +L E+L+A + S YV LS +Y
Sbjct: 578 EAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYT 637
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
LG + +V K + G K+ G SWIE+
Sbjct: 638 ALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 213/672 (31%), Positives = 351/672 (52%), Gaps = 42/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H +++ G L++ D+F N LL+MY AH++FD + +
Sbjct: 435 LQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPER 494
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VS+ T+V + A L+ L + E N F+ + VLK L L +
Sbjct: 495 NMVSFVTLVQGHALRGEFEEASALFQR-LRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGV 553
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGG 185
H + + + + + L+D Y CG ++ R++FD A A W +M+S
Sbjct: 554 HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVA------WTAMVS-- 605
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--CF 243
C E+ TL M + +++ AL + + R V + +++G
Sbjct: 606 ------CYSENDCPEN-TLQIFSKMRVAVSKLNP-FALTSVL--RAAVCLSSVVLGKGIH 655
Query: 244 ECSCFTL--------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
CS TL AL+DMY+ C + +AR F+ ++ +V LW+ MIS Y
Sbjct: 656 ACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTN------DDVILWSLMISRYA 709
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
QNE+A L + S + + ++ +S L+AC N+ + Q+H + G+E +
Sbjct: 710 QCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLD--LGKQIHNHAIKIGHESE 767
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VG+ LIDLYA+ +++S+LE+F L + V+W+ +I+G +K G A +FR+M
Sbjct: 768 LFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRA 827
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ Q SSVL+ C+ AS+ QVH K F + I SLID Y KCG I D
Sbjct: 828 ASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRD 887
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F+ + E D+VSW II G +G+A A F M ++ +K N+ITF+ +LS C
Sbjct: 888 AREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLV + ++F SM+ ++G+EP +EHY C+V LLG+AG +DA I ++P P +W
Sbjct: 948 TGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWR 1007
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L +C H N +L AE++L P+D + YV+LSN+Y+ G D ++ RK+ + +G
Sbjct: 1008 ALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIG 1067
Query: 656 -EKKAGMSWIEV 666
K+ G+SW+E+
Sbjct: 1068 VRKEPGLSWVEI 1079
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 317/625 (50%), Gaps = 37/625 (5%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A ++FD + + ++ ++ AY+ + AI LY ML Y V PN + + VLKACS
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSML-YFRVPPNKYTFPFVLKACS 110
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNV 175
DL GR IH L D + L+D+Y++C F +N +A +V
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR-----FGPAANVFAKMPMRDV 165
Query: 176 ALWNSMLSG----GKQVHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
WN+ML+G G HA + G TL SL+ + + G + G ++
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 226 FMPERDV-VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+ + + +++G +AL+DMY+ C L A ++F + N
Sbjct: 226 YCLRAYLDQNEEQVLIG---------TALLDMYAKCKHLVYACRVFHGMT------VRNE 270
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACINLLNFNSRFALQV 343
W+++I G+VL ++ EA L + GMC S T SAL+ C +L + R Q+
Sbjct: 271 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADL--RMGTQL 328
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H L+ SG D G++L+ +YA+ G + A LF + KD +++ L+ G ++G
Sbjct: 329 HALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKA 388
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A+L+F+ M N + + S++ CS LA+L+ G+ H + RG E SL
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSL 448
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
IDMY KCG ID +F MP RD+VSW +I G G +G KEA F M +P++
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+TF+ +++AC H+GLV E F +M +YG+ P +EHY CMVDLL + G D+A Q I
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
MP K D +W ++L AC H N L ++ + PE +V+LSN+++ G +D
Sbjct: 569 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDE 628
Query: 644 LSKVRKAGKKLGEKKA-GMSWIEVS 667
++VR K G KK+ G SWIE++
Sbjct: 629 AAEVRIIQKVKGFKKSPGCSWIEIN 653
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ ALR C ++ G LH + K G+ D+ GN+LLSMYA +N+A LFDE+A
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +S+ +++ Y N + A ++ M + +V+P+ +++ ACS L GR
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKM-QACNVQPDIATMVSLIPACSHLAALQHGR 427
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N+L+DMY KCG L+R++FD+ ++ WN+M++
Sbjct: 428 CSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR------DIVSWNTMIA 481
Query: 184 G------GKQVHAFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G GK+ + +GFE +DVT LI G + +G F+ M +
Sbjct: 482 GYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHK 537
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 187/494 (37%), Gaps = 113/494 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+++H GL D+F L+ +Y A +F +M +++
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y ++ + AI M + G + PN ++L + G L G +H
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 130 RITREKLEY--DTVLMNT-LLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNVA--- 176
R L+ + VL+ T LLDMY KC L ++F + W+A G V
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 177 ------LWNSM-------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
L+ M L G Q+HA K G +
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------- 244
SL+ MY K G I++ LF+ + +D +S+ ++ G +
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405
Query: 245 ---------CSCFTLSAL-------------------------VDMYSNCNVLCEARKLF 270
+C L+AL +DMY+ C + +R++F
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ + ++ WN+MI+GY ++ +EA TL + + G D TF + AC
Sbjct: 466 DKMPAR------DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACS 519
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
+ + F H + E YI ++DL AR G + A + +P K D
Sbjct: 520 HSGLVTEGKHWFDTMTHKYGILPRME-HYIC---MVDLLARGGFLDEAYQFIQSMPLKAD 575
Query: 387 VVAWSGLIMGCTKH 400
V W L+ C H
Sbjct: 576 VRVWGALLGACRIH 589
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A ++F R+P D A++ LI + G A L+R M+ N++ VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K CS LA L G+ +HA G + T+LID+Y++C +F MP RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSR--LKPNEITFLGVLSACRHAGLVEEAWTI 545
+W ++ G +G AIA+ +M Q R L+PN T + +L G + + ++
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDM-QDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C +++ G+ H +I GL+ + N+L+ MYA ++ + ++F
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M ++IVSW TM+ Y + A L+ M G EP+ + ++ ACS SG +
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG-FEPDDVTFICLIAACSHSGLV 524
Query: 122 DLGR 125
G+
Sbjct: 525 TEGK 528
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++ ++ G++ +F +P D ++ +I G AI ++ M+ R+ PN+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
TF VL AC + TI + GL L ++DL + F A + A
Sbjct: 100 YTFPFVLKACSALADLCAGRTIH-AHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 584 EMPFKPDKTIWASMLKACETHN 605
+MP + D W +ML H
Sbjct: 159 KMPMR-DVVAWNAMLAGYANHG 179
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 353/671 (52%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + I GKS+H +K GL D+F GN ++++Y L++A +LFD+M +N+
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNL 276
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SW +++ ++ N A R + +LE G + P+ +L CS G++D+G +IH
Sbjct: 277 ISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIH 336
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSGGK 186
+ L ++ ++ N L+DMY KCG L+ LF + N +V WNSM+
Sbjct: 337 GMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN------KSVVSWNSMIGAYS 390
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGI---- 238
+ GF E L + M + E+++ + + N +P E +++S +
Sbjct: 391 -------REGFVFETFDLLRKMWMEEELMEVNE-VTILNLLPACLEESELLSLRALHGYS 442
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ F+ +A + Y+ C L A +F ++ + S+ WN++I G+ N
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS------WNAVIGGHAQNG 496
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDY 356
+A+ + G+ D ++ S L AC + LL + ++HG ++ +G E++
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK----EIHGFVLRNGLEMNS 552
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V +L+ LY F R+ K+ V W+ ++ G +++ L + A LFR M++
Sbjct: 553 FVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD 612
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ I+S+L CS L++L GK+VH F +K +++ SL+DMY K G +
Sbjct: 613 GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHS 672
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F + ++V SW +I G G +G+ +A+ F++M +S +P+ TFLGVL AC HA
Sbjct: 673 QRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHA 732
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E M+ Y LEP LEHY C++D+LG+AG ++A I EMP +PD IW+S
Sbjct: 733 GLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSS 792
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L + T+ + ++ AE+LLA Y++LSN+YAT G WD + VR+ K L
Sbjct: 793 LLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSL 852
Query: 656 EKKAGMSWIEV 666
+K G SWIE+
Sbjct: 853 QKDVGCSWIEL 863
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/573 (23%), Positives = 236/573 (41%), Gaps = 107/573 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CGQ ++++ G+ L + + S D L++MY+ ++ +FD + KN
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +V+ Y N+ + AI + ++ +P+ F + ++KAC+ D+ LG+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ L D + N ++ +Y KCG L +LFD+ N+ WNS++ G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ------NLISWNSLIRGFS 287
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G +H VK G E
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ +LIDMY KCG + + LF + + VVSW ++++ YS
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSW---------------NSMIGAYSRE 392
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ E L + +W EE + M ++
Sbjct: 393 GFVFETFDLLRK-------------MW------------MEEEL----------MEVNEV 417
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T + L AC+ S AL HG + ++ ++ + I YA+ G++ A +F
Sbjct: 418 TILNLLPACLEESELLSLRAL--HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFF 475
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ K V +W+ +I G ++G A + +M + F I S+L C L L+
Sbjct: 476 GMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQY 535
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK++H F ++ G E SL+ +Y C + G F+ M +++ V W ++ G Q
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQ 595
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
N EA++ F++M+ L+P+EI +L AC
Sbjct: 596 NELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 220/503 (43%), Gaps = 37/503 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C ++ G +H +K GL ++ N L+ MY+ L++A LF
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
++ K++VSW +M+ AY+ L M +E +E N +L AC +
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L R +H R +Y ++ N + Y KCGSL +F ++ + + +V+ WN+
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL---VFAEHVFFGMNT-KSVSSWNA 487
Query: 181 MLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-R 230
++ G G + A + G +D ++ SL+ L CG L L + E
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL---LACGR----LGLLQYGKEIH 540
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
V G+ E + F +L+ +Y +C+ R F++ N WN+M
Sbjct: 541 GFVLRNGL-----EMNSFVAVSLLSLYFHCSKPFYGRTYFERMGD------KNSVCWNAM 589
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SGY NE EA++L + S G+ D S L AC L +VH + +
Sbjct: 590 LSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG--LGKEVHCFALKN 647
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
D V +L+D+YA+ G + + +F+RL K+V +W+ +I G HG + A LF
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELF 707
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLK 469
DM S++ ++F VL+ C + G A E E +IDM +
Sbjct: 708 EDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGR 767
Query: 470 CGEIDDGLALFKFMPER-DVVSW 491
G +++ L MPE D W
Sbjct: 768 AGRLNEALNFINEMPEEPDAKIW 790
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 217/697 (31%), Positives = 341/697 (48%), Gaps = 101/697 (14%)
Query: 16 RRSIK-----QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
+RS+K GKS+H RIIK GL +F NNL++ YA + DAH++FDEM K++
Sbjct: 21 QRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVF 80
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD--LGRLIH 128
SW +++ Y R A R++ M EP+ ++A++ + G + +G
Sbjct: 81 SWNIILSGYAKGGRLEEAHRVFEEM-----PEPDSVSWTAMIVGYNQMGQFENAIGMF-- 133
Query: 129 ERITREKLEYDTVLMN-TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
RE + D TL ++ C ++ L G++
Sbjct: 134 ----REMVSDDVPPTQFTLTNVLASCAAV-----------------------ECLGIGRK 166
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
VH+F VK G SL++MY K G+ +F+ M + SW +I S
Sbjct: 167 VHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMI------SS 220
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
S LVD+ A+ F+Q +V WN+MISGY + + EA+ +
Sbjct: 221 HMQSGLVDL---------AQVQFEQMIE------RDVVSWNAMISGYNQHGFDREALDIF 265
Query: 308 SH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE------------- 353
S + S D +T SAL AC NL N + Q+H I+ + ++
Sbjct: 266 SKMLMDSSSKPDKFTLASALSACANLENL--KLGKQIHAHIIRTEFDTFGAVGNALISMY 323
Query: 354 --------------------LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
LD I + L+D Y +LG++ A +F L +DVVAW+ +
Sbjct: 324 SKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAM 383
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I+G ++G N A LFR MI N + ++++L V S LASL G+Q+HA + G
Sbjct: 384 IVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGN 443
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+LI MY K G I+D +F + +RD ++WT +I+ Q+G +EA+ F+
Sbjct: 444 ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFE 503
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M+++ +KP+ IT++GVLSAC H GLVE+ + + M+ + + P HY CM+DL G+A
Sbjct: 504 RMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRA 563
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G +A I MP +PD W S+L +C+ H N +L + AE+LL PE+ Y L+
Sbjct: 564 GLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALA 623
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
NVY+ G W++ + +RK+ K G KK G SW+++ +
Sbjct: 624 NVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKN 660
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 235/585 (40%), Gaps = 129/585 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA------------DFTS 53
+ L C + G+ +H ++K+GLS I N+LL+MYA D
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207
Query: 54 LND-------------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
L A F++M +++VSW M++ Y + A+ +++
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
ML S +P+ F ++ L AC+ +L LG+ IH I R + + + N L+ MY K G
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327
Query: 155 --SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
+ +K+ +Q SM+S + + T+L+D Y+
Sbjct: 328 GVEIAQKIIEQ----------------SMISN--------------LDVIAFTALLDGYV 357
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
K G+I+ +F+ + RDVV+WT +IVG
Sbjct: 358 KLGDINPARRIFDSLRVRDVVAWTAMIVG------------------------------- 386
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
YV N N++A+ L + G ++YT + L +L
Sbjct: 387 ---------------------YVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSL 425
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
+ + Q+H SG V + LI +YA+ G++ A +F+ + K+D + W+
Sbjct: 426 ASLD--HGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWT 483
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I+ +HGL A LF M+ + + VL C+ + + +G+ + + +
Sbjct: 484 SMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSY--YNLMQ 541
Query: 452 GFEKEDITLTS---LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCG--QNGRAK 505
K T + +ID++ + G + + A + MP E DV++W ++ C +N
Sbjct: 542 NAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELA 601
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
E A +I+ V SAC G E A I SMK
Sbjct: 602 EVAAERLLLIEPENSGAYSALANVYSAC---GQWENAANIRKSMK 643
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 211/670 (31%), Positives = 343/670 (51%), Gaps = 48/670 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK H RI+ G + D F NNLL+MY+ SL+ A ++FD +++V+W ++ AY +
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 82 NKRPN-----WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N + L+ +L + VLK C SG L +H + L
Sbjct: 156 SVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHA 190
E+D + L+++Y KCG + R LFD W +V LWN ML G G + A
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFD----WMRER--DVVLWNMMLKGYVQLGLEKEA 268
Query: 191 FCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FE 244
F + + G ++ ++ +++ L G D L GI V +
Sbjct: 269 FQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELG----------KQVHGIAVKSGLD 318
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
++LV+MYS AR++F+ + ++ WNSMIS + EE++
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMK------HLDLISWNSMISSCAQSSLEEESV 372
Query: 305 TLLSHIHSSGMCIDSYTFTS-----ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
L + G+ D +T S A KAC L+ + Q+H + +G++ D V
Sbjct: 373 NLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ--GKQIHAHAIKAGFDSDLHVN 430
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S ++D+Y + G++ +A +F+ + D VAW+ +I GC +G A ++ M S
Sbjct: 431 SGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 490
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+++ ++++K SC+ +L +G+Q+HA +K + TSL+DMY KCG I+D L
Sbjct: 491 PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRL 550
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
FK M R++ W ++VG Q+G A+EA+ F+ M ++P+ ++F+G+LSAC HAGL
Sbjct: 551 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT 610
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
EA+ SM +YG+EP +EHY C+VD LG+AG +A+++I MPFK +I ++L
Sbjct: 611 SEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 670
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC + + +A +L A P D + YV+LSN+YA WD ++ RK K+ KK
Sbjct: 671 ACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKD 730
Query: 659 AGMSWIEVSS 668
G SWI+V +
Sbjct: 731 PGFSWIDVKN 740
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 201/502 (40%), Gaps = 122/502 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ C + + +H IK GL D+F L+++Y+ + DA LFD M
Sbjct: 186 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 245
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG--DLDL 123
+++V W M+ Y A +L++ G + P+ F +L C +G DL+L
Sbjct: 246 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG-LRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ +H + L+ D + N+L++MY K C R++F+ + ++ WNSM
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL------DLISWNSM 358
Query: 182 LSG-------------------------------------------------GKQVHAFC 192
+S GKQ+HA
Sbjct: 359 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHA 418
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------- 244
+K GF+ + + ++DMY+KCG++ + +FN++ D V+WT +I GC +
Sbjct: 419 IKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 478
Query: 245 ------------------------CSCFTL-----------------------SALVDMY 257
SC T ++LVDMY
Sbjct: 479 RIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 538
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+ C + +A +LF + + N+ALWN+M+ G + EEA+ L + S G+
Sbjct: 539 AKCGNIEDAYRLFKKMN------VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +F L AC + S +H + G E + S L+D R G V+ A +
Sbjct: 593 DRVSFIGILSACSH-AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 651
Query: 378 LFHRLPKKDVVAWSGLIMGCTK 399
+ +P K + + ++G +
Sbjct: 652 VIETMPFKASASINRALLGACR 673
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 144/337 (42%), Gaps = 36/337 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A + CG + QGK +H IK G D+ + +L MY + +A +F+ ++
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 454
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V+WT+M++ N + A+R+Y H + V P+ + ++ ++KA S L+ GR
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIY-HRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + + D + +L+DMY KCG++ D Y + N+ALWN+ML G
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE----DAYRLFKKMNVRNIALWNAMLVGL 569
Query: 186 KQ-------VHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
Q V+ F + G E + V+ ++ G + + MP
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND-----Y 624
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG--- 293
GI SC LVD ++ EA K+ + A+++ L I G
Sbjct: 625 GIEPEIEHYSC-----LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 679
Query: 294 ---------YVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ L + A LLS+I+++ D T
Sbjct: 680 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L+ +L GK HA V G + +L+ MY KCG + +F PERD
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 488 VVSWTGIIVGCG-----QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+V+W I+ +G A+E + F+ + S +T VL C ++G + A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + GLE + +V++ + G DA L M + D +W MLK
Sbjct: 203 EGVH-GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLKG 258
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 208/663 (31%), Positives = 352/663 (53%), Gaps = 49/663 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
K LH ++ G Q IF L+++YA+ ++ + FD++ +K++ +W +M++AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + AI + +L + P+ + + VLKAC G L GR IH + +++
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 251
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVK- 194
+ +L+ MY + G + R LFD + ++ WN+M+SG G A V
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDM------PFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 195 ----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
G + VT+ S++ + + G+I + + + +I E F
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY-----------VIKHGLEFDLFVS 354
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT---LL 307
+AL++MY+ L +ARK F Q +V WNS+I+ Y EQN++ +T
Sbjct: 355 NALINMYAKFGNLEDARKAFQQM------FITDVVSWNSIIAAY---EQNDDPVTAHGFF 405
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLY 366
+ +G D T S A I + + + + VHG I+ G+ + D ++G+ ++D+Y
Sbjct: 406 VKMQLNGFQPDLLTLVSL--ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFII 425
A+LG + SA ++F +P KDV++W+ LI G ++GL S A +++ M + + NQ
Sbjct: 464 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S+L + + +L++G ++H +K + T LID+Y KCG + D ++LF +P+
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
V+W II G +G A++ + F EM+ +KP+ +TF+ +LSAC H+G VEE
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M+ EYG++P L+HY CMVDLLG+AG + A I +MP +PD +IW ++L AC H
Sbjct: 644 FRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 702
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
N +L +++L ++ YV+LSN+YA +G W+ + KVR ++ G KK G S I
Sbjct: 703 NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Query: 665 EVS 667
EV+
Sbjct: 763 EVN 765
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/549 (22%), Positives = 217/549 (39%), Gaps = 111/549 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ CG ++ G+ +HC K G ++F +L+ MY+ F A LF
Sbjct: 217 DFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++ SW M++ N A+ + + M G ++ N ++L C GD+
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG-IKMNFVTVVSILPVCPQLGDI 332
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LIH + + LE+D + N L++MY K G+L RK F Q +V WN
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM------FITDVVSWN 386
Query: 180 SMLSGGKQ--------------------------------------------VHAFCVKR 195
S+++ +Q VH F ++R
Sbjct: 387 SIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRR 446
Query: 196 GFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G+ EDV + +++DMY K G +D +F +P +DV+SW +I G
Sbjct: 447 GWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITG------------- 493
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
Y L + I Y + E+ +E I
Sbjct: 494 --------------------------YAQNGLASEAIEVYKMMEECKEIIP--------- 518
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ T+ S L A ++ +++HG ++ + LD V + LID+Y + G +
Sbjct: 519 ---NQGTWVSILPAYAHVGALQQ--GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 573
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A+ LF+++P++ V W+ +I HG LF +M++ + S+L CS
Sbjct: 574 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 633
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTG 493
+ GK + G + ++D+ + G ++ K MP + D W
Sbjct: 634 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 693
Query: 494 IIVGCGQNG 502
++ C +G
Sbjct: 694 LLGACRIHG 702
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 30/321 (9%)
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCID-SYTFTSALKACINLLNFNSRFALQVHGL 346
+ S Y L QNEE ID ++ F S+ K + FA +H L
Sbjct: 105 SPQFSSYGLGNQNEE--------------IDFNFLFDSSTK---------TPFAKCLHAL 141
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG-LNSL 405
+V +G + + L++LYA LG+V + F ++P+KDV AW+ +I +G +
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 201
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
++ ++ S + + VLK C L G+++H + K GF+ SLI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 258
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY + G +LF MP RD+ SW +I G QNG A +A+ EM +K N +T
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+ +L C G + A I + ++GLE L ++++ + G +DA + +M
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVI-KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 586 PFKPDKTIWASMLKACETHNN 606
F D W S++ A E +++
Sbjct: 378 -FITDVVSWNSIIAAYEQNDD 397
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 166/447 (37%), Gaps = 104/447 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ +V L C Q I +H +IK+GL D+F N L++MYA F +L DA K
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M ++VSW +++ AY N P A + M + +P+ ++ + S D
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQSRD 432
Query: 121 LDLGRLIHERITREK-LEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAASAY 172
R +H I R L D V+ N ++DMY K G L K+F+ +W
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492
Query: 173 G-------------------------NVALWNSMLSG---------GKQVHAFCVKRGFE 198
G N W S+L G ++H +K
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 552
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ T LID+Y KCG + D ++LF +P+ V+W II SC
Sbjct: 553 LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII------SC----------- 595
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+ ++ E+ + L + G+ D
Sbjct: 596 -----------------------------------HGIHGHAEKTLKLFGEMLDEGVKPD 620
Query: 319 SYTFTSALKACINLLNFNSRFALQ---VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
TF S L AC +S F + L+ G + ++DL R G ++ A
Sbjct: 621 HVTFVSLLSACS-----HSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA 675
Query: 376 LELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ +P + D W L+ C HG
Sbjct: 676 YDFIKDMPLQPDASIWGALLGACRIHG 702
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 203/661 (30%), Positives = 337/661 (50%), Gaps = 62/661 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ Q K LHC I+K + F NNL++ Y +L AH +FD + + N+
Sbjct: 12 LKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNL 71
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW T+++ Y+ + +++N M V N ++SG + G +
Sbjct: 72 FSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWN----------LAISGYANYGS-CSD 120
Query: 130 RITREKLEYDTVLMN----TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ KL MN T M + C S + V L G
Sbjct: 121 AVRVYKLMLKDAAMNLNRITFSTMLILC----------------SKFRCVDL-------G 157
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+Q++ +K GF + + L+DMY K G I D F+ MPER+VV +I G C
Sbjct: 158 RQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRC 217
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++ E+++LF + + W MI+G + N EA+
Sbjct: 218 ---------------GMIEESQRLFCGLKERDSIS------WTIMITGLMQNGLEREALD 256
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ + +G +D +TF S L AC +LL Q+H ++ + ++ + VGS L+D+
Sbjct: 257 MFREMRLAGFAMDQFTFGSVLTACGSLLALGE--GKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++ ++KSA +F R+P+K+V++W+ +++G ++G + A +F +M + + + F +
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SV+ C+ LASL G Q H + G +LI +Y KCG ++ LF M
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RD VSWT ++ G Q G+A E I F+ M+ LKP+ +TF+GVLSAC AGLVE+
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM E+G+ P ++H C++DLLG+AG ++A I MP PD WA++L +C H
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWI 664
+ ++ A+ L+A P++P+ YV+LS++YA+ G WD ++++R+ + K K+ G SWI
Sbjct: 555 DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWI 614
Query: 665 E 665
+
Sbjct: 615 K 615
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 191/452 (42%), Gaps = 82/452 (18%)
Query: 1 MDLRRIV--EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH 58
M+L RI L C + R + G+ ++ +I+K+G D+F G+ L+ MY + DA
Sbjct: 134 MNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAK 193
Query: 59 KLFDEMARKNIV-------------------------------SWTTMVTAYTSNKRPNW 87
+ FDEM +N+V SWT M+T N
Sbjct: 194 RYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLERE 253
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A+ ++ M G + F + +VL AC L G+ IH + R + + + + L+
Sbjct: 254 ALDMFREMRLAG-FAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALV 312
Query: 148 DMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAF--CVKRGFE 198
DMY KC R + + + NV W +ML G Q V F + G E
Sbjct: 313 DMYSKC----RSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS-ALVDMY 257
+D TL S+I +++G A F+ R +VS G+I S T+S AL+ +Y
Sbjct: 369 PDDFTLGSVISSCANLASLEEG-AQFHC---RALVS--GLI------SFITVSNALITLY 416
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
C + +LF + + + W ++++GY + E I L + + G+
Sbjct: 417 GKCGSTENSHRLFTEMN------IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKP 470
Query: 318 DSYTFTSALKACI-------NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
D TF L AC L F S ++ HG++ +D+ + +IDL R G
Sbjct: 471 DGVTFIGVLSACSRAGLVEKGLQYFES--MIKEHGIMPI----VDHC--TCIIDLLGRAG 522
Query: 371 NVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
++ A + +P DVV W+ L+ C HG
Sbjct: 523 RLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 42/337 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG ++ +GK +H +I+ ++F G+ L+ MY+ S+ A +
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +KN++SWT M+ Y N A++++ M G VEP+ F +V+ +C+
Sbjct: 328 FKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG-VEPDDFTLGSVISSCANLAS 386
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SA 171
L+ G H R L + N L+ +Y KCGS + +LF + + +W A +
Sbjct: 387 LEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAG 446
Query: 172 YGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
Y N + +++ A G + + VT ++ + G ++ GL F M
Sbjct: 447 YAQFGKANETIGLFERMLA----HGLKPDGVTFIGVLSACSRAGLVEKGLQYFESM---- 498
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS------SWAA-----SA 280
+ GI+ C+C ++D+ L EAR + WA
Sbjct: 499 -IKEHGIMPIVDHCTC-----IIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRV 552
Query: 281 YGNVAL--W--NSMISGYVLNEQNEEAITLLSHIHSS 313
+G++ + W +S+I+ L QN + LLS +++S
Sbjct: 553 HGDMEIGKWAADSLIA---LEPQNPASYVLLSSLYAS 586
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 77/352 (21%)
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
M S + S LK C + N A ++H LI+ + + + + +NLI Y +LGN+
Sbjct: 1 MSSSSNYYASLLKLCCE--SQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAY 58
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNS-----LAYLLFRDMINSN------------ 417
A +F +P+ ++ +W+ ++ +K GL S + FRD ++ N
Sbjct: 59 AHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSC 118
Query: 418 ---------------QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
++N+ S++L +CS + G+Q++ +K GF + +
Sbjct: 119 SDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP 178
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVV-------------------------------SW 491
L+DMY K G I D F MPER+VV SW
Sbjct: 179 LVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISW 238
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH-----AGLVEEAWTIF 546
T +I G QNG +EA+ F+EM + ++ TF VL+AC G A+ I
Sbjct: 239 TIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIR 298
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
T K + L VD+ + AE + MP K + W +ML
Sbjct: 299 TDHKDNVFVGSAL------VDMYSKCRSIKSAETVFKRMPQK-NVISWTAML 343
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 348/677 (51%), Gaps = 52/677 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-----LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
C + RS QG+ +H ++ L+++ N+L++MY + + A +FD M +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N VSW ++ A+ N R A+ L++ ML G+ P+ F + ++AC+ GDL LGR +
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTA-PDEFALGSAVRACAELGDLGLGRQV 168
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H + + ++ N L+ MY K GS+ D ++ + ++ W S+++G
Sbjct: 169 HAQAIKSDNGGHLIVQNALVTMYSKSGSVG----DGFALFERIRDKDLFSWGSIIAGLAQ 224
Query: 185 -GKQVHAFCVKRGFEKEDV------------TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
G+++ A + R E + S++ L+ GE GL + + +R+
Sbjct: 225 QGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCV-KYKLDRN 283
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
S+ G +G DMY+ CN L A K+F + S ++ WNS+I
Sbjct: 284 --SYAGCSLG-------------DMYARCNKLDSAMKVFYRIES------PDLVSWNSLI 322
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+ + + EA+ L S + S + D T + L AC+ R +H +V G
Sbjct: 323 NAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDAL--RQGRSIHSYLVKLG 380
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
D +V ++LI +Y R + SA+++FH +DVV W+ ++ C +H + LFR
Sbjct: 381 LGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFR 440
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+ +S +++ +++VL + L KQVHA+ K G + I +LID Y KCG
Sbjct: 441 LLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCG 500
Query: 472 EIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
+DD LF+ M RDV SW+ +IVG Q G AKEA+ F M +KPN +TF+GVL
Sbjct: 501 SLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVL 560
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
AC GLV+E ++ M+PEYG+ P EH C++DLL +AG +A + + +MPF+PD
Sbjct: 561 IACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPD 620
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W ++L A THN+ ++ AE +L P + YV+L N+YA+ G W+ ++++K
Sbjct: 621 IIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKD 680
Query: 651 GKKLG-EKKAGMSWIEV 666
+ G +K G SWI++
Sbjct: 681 MRSSGVQKSPGKSWIKL 697
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 225/531 (42%), Gaps = 100/531 (18%)
Query: 114 ACSLSGDLDLGRLIHERITREK-----LEYDTVLMNTLLDMYVKCGSL--TRKLFD---- 162
ACS GRL+H + L +T+L N L+ MY +C + R +FD
Sbjct: 49 ACSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLD 108
Query: 163 -QYSNWAA--SAYGN-------VALWNSM------------------------LSGGKQV 188
+WAA +A+ + L++SM L G+QV
Sbjct: 109 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQV 168
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
HA +K + +L+ MY K G + DG ALF + ++D+ SW II G +
Sbjct: 169 HAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQ---- 224
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ R++ +A+ +
Sbjct: 225 ----------------QGREM--------------------------------DALHIFR 236
Query: 309 HIHSSGM-CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + GM + + F S +AC ++N + + Q+HGL V + + G +L D+YA
Sbjct: 237 EMIAEGMHHPNEFHFGSVFRACSVVIN-SLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYA 295
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
R + SA+++F+R+ D+V+W+ LI + GL S A +LF +M S+ + + +
Sbjct: 296 RCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMA 355
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C +LR+G+ +H++ VK G + + SLI MY +C + + +F +RD
Sbjct: 356 LLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRD 415
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VV+W I+ C Q+ ++ F+ + S + I+ VLSA G E A +
Sbjct: 416 VVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVH- 474
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + GL ++D + G DDA +L M D W+S++
Sbjct: 475 AYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 525
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 210/533 (39%), Gaps = 98/533 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+R C + + G+ +H + IK + N L++MY+ S+ D LF+ + K+
Sbjct: 152 AVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKD 211
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS-GDLDLGRLI 127
+ SW +++ R A+ ++ M+ G PN F + +V +ACS+ L+ G I
Sbjct: 212 LFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQI 271
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NW-----AASAYG-- 173
H + KL+ ++ +L DMY +C L K+F + +W A SA G
Sbjct: 272 HGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLL 331
Query: 174 --NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSL 207
+ L++ M L G+ +H++ VK G + + SL
Sbjct: 332 SEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSL 391
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
I MY +C + + +F+ +RDVV+W I+ C
Sbjct: 392 ISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTAC------------------------- 426
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
V + E+ L +HSS +D + + L
Sbjct: 427 ---------------------------VQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLS 459
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL-PKKD 386
A L F A QVH G D I+ + LID YA+ G++ A +LF + +D
Sbjct: 460 ASAELGYF--EMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRD 517
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V +WS LI+G + G A LF M N N VL CS + + G ++
Sbjct: 518 VFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYS 577
Query: 447 FC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVG 497
+ G + +ID+ + G + + MP E D++ W ++
Sbjct: 578 IMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 630
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 300/588 (51%), Gaps = 42/588 (7%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
V PN + + LKACS D GR IH L+ D + LLDMYVKC L
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP--- 62
Query: 161 FDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKE-------DVTLTSLID 209
D +A ++ WN+ML+G G HA + + TL +L+
Sbjct: 63 -DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLP 121
Query: 210 MYLKCGEIDDGLALFNF------MPERDVVS--WTGIIVGCFECSCFTLSALVDMYSNCN 261
+ + G + G ++ + P R+ S G+++G +AL+DMY+ C
Sbjct: 122 LLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG---------TALLDMYAKCG 172
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
L AR++FD A N W+++I G+VL + +A L + + G+C S T
Sbjct: 173 SLLYARRVFD------AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 322 -FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
SAL+AC +L + R Q+H L+ SG D G++L+ +YA+ G + A+ LF
Sbjct: 227 SIASALRACASLDHL--RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD 284
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ KD V++S L+ G ++G A+L+F+ M N + + + S++ CS LA+L+
Sbjct: 285 EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQH 344
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+ H + RG E +LIDMY KCG ID +F MP RD+VSW +I G G
Sbjct: 345 GRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGI 404
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G KEA A F EM P+ +TF+ +LSAC H+GLV E F M YGL P +E
Sbjct: 405 HGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME 464
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY CMVDLL + G D+A + I MP + D +W ++L AC + N L ++ +
Sbjct: 465 HYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQEL 524
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
PE +V+LSN+Y+ G +D ++VR K G KK+ G SWIE++
Sbjct: 525 GPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 199/500 (39%), Gaps = 121/500 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C G+++H I GL D+F LL MY L DA +F M ++
Sbjct: 16 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75
Query: 69 IVSWTTMVTAYTSNKRPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+V+W M+ Y + + A+ L + ++ + PN A+L + G L G +
Sbjct: 76 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135
Query: 128 H----------ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAAS 170
H R ++ KL +L LLDMY KCGSL R++FD W+A
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195
Query: 171 AYGNV---------ALWNSMLSG-------------------------GKQVHAFCVKRG 196
G V L+ +ML+ G+Q+HA K G
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------ 244
+ SL+ MY K G ID +ALF+ M +D VS++ ++ G +
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 245 ----C--------------SCFTLSAL-------------------------VDMYSNCN 261
C +C L+AL +DMY+ C
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +R++F+ S ++ WN+MI+GY ++ +EA L +++ G D T
Sbjct: 376 RIDLSRQVFNMMPSR------DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429
Query: 322 FTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F L AC + ++ F + HG +T E YI ++DL +R G + A E
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME-HYIC---MVDLLSRGGFLDEAYEF 485
Query: 379 FHRLP-KKDVVAWSGLIMGC 397
+P + DV W L+ C
Sbjct: 486 IQSMPLRADVRVWVALLGAC 505
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I ALR C ++ G+ LH + K G+ D+ GN+LLSMYA ++ A LFDEMA
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VS++ +V+ Y N R A ++ M + +VEP+ +++ ACS L GR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N L+DMY KCG L+R++F+ + ++ WN+M++
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR------DIVSWNTMIA 400
Query: 184 G------GKQVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G GK+ A ++ GF + VT L+ G + +G F+ M
Sbjct: 401 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C +++ G+ H +I GL+ + N L+ MYA ++ + ++F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ M ++IVSW TM+ Y + A L+ M G P+G + +L ACS SG
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSHSG 441
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 300/588 (51%), Gaps = 42/588 (7%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
V PN + + LKACS D GR IH L+ D + LLDMYVKC L
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP--- 62
Query: 161 FDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKE-------DVTLTSLID 209
D +A ++ WN+ML+G G HA + + TL +L+
Sbjct: 63 -DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLP 121
Query: 210 MYLKCGEIDDGLALFNF------MPERDVVS--WTGIIVGCFECSCFTLSALVDMYSNCN 261
+ + G + G ++ + P R+ S G+++G +AL+DMY+ C
Sbjct: 122 LLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG---------TALLDMYAKCG 172
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
L AR++FD + N W+++I G+VL + +A L + + G+C S T
Sbjct: 173 SLLYARRVFDAMPAR------NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 322 -FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
SAL+AC +L + R Q+H L+ SG D G++L+ +YA+ G + A+ LF
Sbjct: 227 SIASALRACASLDHL--RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD 284
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ KD V++S L+ G ++G A+L+F+ M N + + + S++ CS LA+L+
Sbjct: 285 EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQH 344
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+ H + RG E +LIDMY KCG ID +F MP RD+VSW +I G G
Sbjct: 345 GRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGI 404
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G KEA A F EM P+ +TF+ +LSAC H+GLV E F M YGL P +E
Sbjct: 405 HGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME 464
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY CMVDLL + G D+A + I MP + D +W ++L AC + N L ++ +
Sbjct: 465 HYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQEL 524
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
PE +V+LSN+Y+ G +D ++VR K G KK+ G SWIE++
Sbjct: 525 GPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 198/500 (39%), Gaps = 121/500 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C G+++H I GL D+F LL MY L DA +F M ++
Sbjct: 16 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75
Query: 69 IVSWTTMVTAYTSNKRPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+V+W M+ Y + + A+ L + ++ + PN A+L + G L G +
Sbjct: 76 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135
Query: 128 H----------ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAAS 170
H R ++ KL +L LLDMY KCGSL R++FD W+A
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195
Query: 171 AYGNV---------ALWNSMLSG-------------------------GKQVHAFCVKRG 196
G V L+ +ML+ G+Q+HA K G
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------ 244
+ SL+ MY K G ID +ALF+ M +D VS++ ++ G +
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 245 ------------------CSCFTLSAL-------------------------VDMYSNCN 261
+C L+AL +DMY+ C
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +R++F+ S ++ WN+MI+GY ++ +EA L +++ G D T
Sbjct: 376 RIDLSRQVFNMMPSR------DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429
Query: 322 FTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F L AC + ++ F + HG +T E YI ++DL +R G + A E
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME-HYIC---MVDLLSRGGFLDEAYEF 485
Query: 379 FHRLP-KKDVVAWSGLIMGC 397
+P + DV W L+ C
Sbjct: 486 IQSMPLRADVRVWVALLGAC 505
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I ALR C ++ G+ LH + K G+ D+ GN+LLSMYA ++ A LFDEMA
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VS++ +V+ Y N R A ++ M + +VEP+ +++ ACS L GR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N L+DMY KCG L+R++F+ + ++ WN+M++
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR------DIVSWNTMIA 400
Query: 184 G------GKQVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G GK+ A ++ GF + VT L+ G + +G F+ M
Sbjct: 401 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C +++ G+ H +I GL+ + N L+ MYA ++ + ++F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ M ++IVSW TM+ Y + A L+ M G P+G + +L ACS SG
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSHSG 441
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/719 (30%), Positives = 338/719 (47%), Gaps = 114/719 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH-- 58
+DL R AL H ++H I + + +F N+LL+ Y H
Sbjct: 6 LDLLRSCTALPHVA---------AVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAA 56
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+L DEM R+N VS+ ++++Y+ P A+ + + + F Y+A L ACS +
Sbjct: 57 RLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRA 116
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
DL G+ +H + L L N+L MY CG + R++FD AA + +V+
Sbjct: 117 LDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFD-----AAEEHDDVS 171
Query: 177 LWNSMLSG----------------------------------------------GKQVHA 190
WNS+LSG + VH
Sbjct: 172 -WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHG 230
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
VK G + + +++IDMY K G + + +ALF +P+ +V+ + +I G
Sbjct: 231 CVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAG--------- 281
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
C D+ + V E + EA++L S +
Sbjct: 282 ------------FCR-----DEAA--------------------VGKEVSREALSLYSEM 304
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
S GM +TF+S L+AC F F Q+HG ++ + D +GS LIDLY+ G
Sbjct: 305 QSRGMQPSEFTFSSILRACNLAGEFG--FGKQIHGQVLKHSFHDDDYIGSALIDLYSDSG 362
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ F LPK+D+V W+ +I GC ++ L A LF++ I + F +SSV+
Sbjct: 363 CMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMN 422
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ LA R G+Q+ +K GF + S I M + G++D F+ M RDVVS
Sbjct: 423 ACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVS 482
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W+ +I Q+G A++A+ F EM+ +++ PNE+TFL VL+AC H GLV++ + MK
Sbjct: 483 WSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMK 542
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
EYGL P ++H C+VDLLG+AG DAE I + F D +W S+L +C H + +
Sbjct: 543 NEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 602
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
++A+Q++ P + YV+L N+Y G SK R K+ G KK G+SWIE+ S
Sbjct: 603 QLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRS 661
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 220/759 (28%), Positives = 350/759 (46%), Gaps = 107/759 (14%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQD-IFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+AL C +++ QG+ LH +K D +F + MY S DA K+FD+M+
Sbjct: 51 QALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSE 110
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+ I +W M+ A S R AI LY M G V + F + VLKAC + LG
Sbjct: 111 RTIFTWNAMIGACVSAGRYVEAIELYKEMRVLG-VSLDAFTFPCVLKACGAFKERRLGCE 169
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + + N L+ MY KCG L R LFD + WNS++S
Sbjct: 170 IHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS----GLMEKDDPVSWNSIISA 225
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ +HA +K +
Sbjct: 226 HVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTD 285
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT--LSALVDM-- 256
+LI MY CG+++D +F M +D VSW ++ G + ++ ++ DM
Sbjct: 286 VYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQD 345
Query: 257 -------YSNCNVLCEARK----------------------------LFDQYSSWAASAY 281
S N++ + + L D Y Y
Sbjct: 346 SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 282 GNVAL----------WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
A W ++I+GY NE + +A+ LL + M +D S L AC
Sbjct: 406 MGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSG 465
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + + ++HG ++ G D ++ + ++++Y L V A +F + KD+V+W+
Sbjct: 466 LK--SEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWT 522
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I C +GL A LF +I +N + + + SVL + L+SL++GK++H F +++
Sbjct: 523 SMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK 582
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
GF E + SL+DMY +CG +++ +F ++ +RD++ WT +I G +G K+AI F
Sbjct: 583 GFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLF 642
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+M + P+ ITFL +L AC H+GLV E F MK EY LEP EHY C+VDLL +
Sbjct: 643 SKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLAR 702
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
+ ++A + MP +P +W ++L AC H+N L + A++LL + E+ YV++
Sbjct: 703 SNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLV 762
Query: 632 SNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEVSS 668
SN +A G W+ + +VR G KL +KK G SWIEV +
Sbjct: 763 SNTFAADGRWNDVEEVRSIMKGNKL-KKKPGCSWIEVEN 800
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 224/507 (44%), Gaps = 42/507 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V AL+ C IK G+ +H I+K D++ N L++MYA+ + DA ++F M
Sbjct: 254 FVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSML 313
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VSW T+++ N + AI + M + G +P+ ++ A S +L G
Sbjct: 314 FKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ-KPDQVSVLNMIAASGRSANLLAGM 372
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-----GNVALWNS 180
+H + ++ + + N+L+DMY KC + + SA+ ++ W +
Sbjct: 373 EVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV---------KYMGSAFEYMPEKDLISWTT 423
Query: 181 MLSGGKQVHA------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+++G Q K EK DV + + L C + E+ +
Sbjct: 424 IIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKS---------EKLIKE 474
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
G ++ +A+V++Y ++ AR +F+ +S ++ W SMI+
Sbjct: 475 IHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINS------KDIVSWTSMITCC 528
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V N EA+ L + + + + D T S L A L + ++HG ++ G+ L
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKK--GKEIHGFLIRKGFFL 586
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ ++ ++L+D+YAR G +++A +F+ + ++D++ W+ +I HG A LF M
Sbjct: 587 EGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT--LTSLIDMYLKCGE 472
+ N + ++L CS + GKQ H +K ++ E L+D+ +
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNS 705
Query: 473 IDDGLALFKFMP-ERDVVSWTGIIVGC 498
+++ + MP E W ++ C
Sbjct: 706 LEEAYHFVRNMPIEPSAEVWCALLGAC 732
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 13/345 (3%)
Query: 301 EEAITLLSHIHSSGMCIDS-----YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+EA L+H + + + ++ AL+ C + L H + T Y
Sbjct: 23 KEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAH-FLKTQNYLDS 81
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+ + + +Y + G+ A+++F ++ ++ + W+ +I C G A L+++M
Sbjct: 82 VFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRV 141
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ F VLK C R G ++H VK G+ +LI MY KCG++
Sbjct: 142 LGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGG 201
Query: 476 GLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
LF M + D VSW II G + EA++ F+ M + ++ N TF+ L AC
Sbjct: 202 ARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC 261
Query: 534 RHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
++ I +K + + ++ + ++ + G +DAE++ M FK D
Sbjct: 262 EGPTFIKIGRGIHAVILKSNHFTDVYVSN--ALIAMYANCGQMEDAERVFKSMLFK-DCV 318
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
W ++L N+ +I Q + S + P + +L+ + A+
Sbjct: 319 SWNTLLSGM-VQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAAS 362
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL +V L S+K+GK +H +I+ G + N+L+ MYA ++ +A +F
Sbjct: 552 DLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIF 611
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + +++++ WT+M+ A + AI L++ M + +V P+ + A+L ACS SG +
Sbjct: 612 NYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTD-ENVLPDHITFLALLYACSHSGLV 670
Query: 122 DLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL 156
G+ E + E KLE L+D+ + SL
Sbjct: 671 VEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSL 706
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 350/669 (52%), Gaps = 33/669 (4%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
++ C ++ G+++H +K + D+F GN L++MY F + A K+FD+M ++N
Sbjct: 202 VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRN 261
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGDLDLGRLI 127
+VSW +++ A N + L+ +L + P+ V+ C+ G++ LG +
Sbjct: 262 LVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF 321
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGG 185
H + L + + ++LLDMY KCG L R LFD NV WNSM+ G
Sbjct: 322 HGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK-------NVISWNSMIGGY 374
Query: 186 KQVH----AFCVKRGFEKED---VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ AF + R + ED V +L+++ C E F+ +++ + +
Sbjct: 375 SKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE------EIQFLKLKEIHGY-AL 427
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
G + +A V Y+ C L A +F S S+ WN++I G+V N
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSS------WNALIGGHVQNG 481
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+A+ L + SG+ D +T S L AC L + + ++HG ++ +G+ELD +
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC--GKEIHGSMLRNGFELDEFI 539
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+L+ LY + G + A F + +K++V W+ +I G +++ A +F M++S
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKI 599
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ I L CS +++LR GK++H F VK + SLIDMY KCG ++
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + + V+W +I G G +G ++AI F+ M + +P+ +TF+ +L+AC HAGL
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V E M+ +G++P LEHY C+VD+LG+AG ++A +L+ E+P KPD IW+S+L
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
+C + + + +A +LL P+ YV++SN YA LG WD + K+R+ K++G +K
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839
Query: 658 KAGMSWIEV 666
AG SWIE+
Sbjct: 840 DAGCSWIEI 848
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 196/498 (39%), Gaps = 109/498 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C ++ ++ G H +K GL ++ ++LL MY+ L +A LF
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D KN++SW +M+ Y+ ++ A L M V+ N VL C
Sbjct: 358 D-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQF 416
Query: 122 DLGRLIHERITREK-LEYDTVLMNTLLDMYVKCGSL------------------------ 156
+ IH R ++ D ++ N + Y KCGSL
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGG 476
Query: 157 ------TRKLFDQY-----SNWAASAYGNVALWNS-----MLSGGKQVHAFCVKRGFEKE 200
RK D Y S + +L ++ LS GK++H ++ GFE +
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------- 241
+ SL+ +Y++CG+I F+ M E+++V W +I G
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 242 ----------------CFECS---------CFTLS-----------ALVDMYSNCNVLCE 265
C + S CF + +L+DMY+ C + +
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQ 656
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
++ +FD+ G V WN +I+GY ++ +AI L + ++G DS TF +
Sbjct: 657 SQNIFDR-----VHLKGEVT-WNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIAL 710
Query: 326 LKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
L AC L+ + Q+ L Y + ++D+ R G + ALEL + LP
Sbjct: 711 LTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHY---ACVVDMLGRAGRLNEALELVNELP 767
Query: 384 -KKDVVAWSGLIMGCTKH 400
K D WS L+ C +
Sbjct: 768 DKPDSRIWSSLLSSCRNY 785
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 123/251 (49%), Gaps = 5/251 (1%)
Query: 336 NSRFALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
N ++H I TS ++ D ++ + L+ +Y+ + + +F+ +K++ W+ L+
Sbjct: 108 NIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALL 167
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
G ++ L A +F +MI+ + V + F + V+K C + +R G+ VH F +K
Sbjct: 168 SGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKV 227
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +LI MY K G ++ + +F MP+R++VSW ++ C +NG +E+ F+
Sbjct: 228 LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKG 287
Query: 514 MIQSR--LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
++ L P+ T + V+ C G V +F + + GL L+ ++D+ +
Sbjct: 288 LLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSK 346
Query: 572 AGCFDDAEQLI 582
G +A L
Sbjct: 347 CGYLCEARVLF 357
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF-CVKRGFEKEDITLTSLIDMYLKC 470
D+++S+ + +I +L++C ++ G+++H F F+ + + +T L+ MY C
Sbjct: 83 DVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSIC 142
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGV 529
D +F +++ W ++ G +N ++A+ F EMI + P+ T V
Sbjct: 143 DSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCV 202
Query: 530 LSAC-----RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
+ AC G + + T + + + L + + G+ G + A ++ +
Sbjct: 203 IKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNAL------IAMYGKFGFVESAVKVFDK 256
Query: 585 MPFKPDKTIWASMLKAC 601
MP + + W S++ AC
Sbjct: 257 MP-QRNLVSWNSVMYAC 272
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 218/754 (28%), Positives = 361/754 (47%), Gaps = 105/754 (13%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR- 66
E L+ CG+ S+ +GK +H +++ G ++ F GN L+ MY + ++ A F A
Sbjct: 47 ELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASI 106
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K + + M++AY N N A+ LY+ M E G EP+ Y VL +CS G L R
Sbjct: 107 KAVACYNQMLSAYGKNGLWNRALELYHRMCEEGP-EPDKITYFIVLGSCSAVGSLREARE 165
Query: 127 IHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--SAYGN- 174
IH I + + + L N L++MY KCGS+ RK+FD N W + S+Y N
Sbjct: 166 IHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANN 225
Query: 175 ------VALWNSM---------------------LSGGKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M L GK +HA V E D ++L
Sbjct: 226 GFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMES-DFVGSAL 284
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------------------- 241
I+MY +CG++ F + + VV WT ++
Sbjct: 285 INMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADG 344
Query: 242 -------------------------CFECSCFTL---SALVDMYSNCNVLCEARKLFDQY 273
FEC +L +AL+ MY+ C L AR +F++
Sbjct: 345 VTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRV 404
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
NV W +MIS Y +EA+ L + + G + YTF++ L AC +
Sbjct: 405 RQKR-----NVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSG 459
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ + +++HG + S + V + L+ +YA+ G+++ A F +KD+V+W+ +
Sbjct: 460 DLEA--GMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAM 517
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RG 452
I +HGL A L++ M + ++ I+S L C+ SL+ G+++H+ +K +
Sbjct: 518 IGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQS 577
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + T+L++MY +CG ++ ++F+ M +RDV+SWT + Q G A + + +
Sbjct: 578 FRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYL 637
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
EM+ ++PNEITF +L C HAGL+ F M+ E+ + P EH+ CMVDLLG++
Sbjct: 638 EMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRS 697
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G DAE L+ MP++PD W ++L +C+TH++ A ++ PE+ S Y +LS
Sbjct: 698 GRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLS 757
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+++ G+ +V+ + K++G KK G S IE
Sbjct: 758 SIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/598 (23%), Positives = 248/598 (41%), Gaps = 109/598 (18%)
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS-- 155
+G VE +Y +L+ C G L G+L+H + R + L N L+ MY CG
Sbjct: 39 HGYVE----LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIH 94
Query: 156 LTRKLFDQYSNWAA--------SAYGNVALWNSMLS------------------------ 183
L R F +++ A SAYG LWN L
Sbjct: 95 LARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSC 154
Query: 184 -------GGKQVHAFCVKRG-FEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+++HA ++ +++++L +L++MY KCG +++ +F+ + RD VS
Sbjct: 155 SAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVS 214
Query: 235 WTGIIVG------CFEC------------------------------------------- 245
WT +I C E
Sbjct: 215 WTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSN 274
Query: 246 --SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S F SAL++MY+ C + AR+ F++ + +V W S+++ YV EA
Sbjct: 275 MESDFVGSALINMYARCGDVSSARQAFEKIQN------KHVVCWTSLMTAYVQTCHYREA 328
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + G+ D T+ +AL AC +L A +H + G++ +V + L+
Sbjct: 329 LDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA--IHSRVFECGFQ-SLVVHTALL 385
Query: 364 DLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+YA+ G + +A +F+R+ K++V W+ +I + G A L+ M+ N+
Sbjct: 386 TMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNE 445
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+VL CS L G ++H +L+ MY KCG ++ + F+
Sbjct: 446 YTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEA 505
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+D+VSW +I Q+G +EA+ +Q M + P+E+T LSAC +G ++
Sbjct: 506 SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLG 565
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I + + L +V++ G+ G + A + +M + D W +M A
Sbjct: 566 REIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMG-QRDVLSWTAMTSA 622
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 180/447 (40%), Gaps = 118/447 (26%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C ++K+GK++H R+ + G Q + LL+MYA L+ A +F+ + +
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCGELDAARAVFNRVRQ 406
Query: 67 K-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K N+ WT M++AY A+ LY+ M+ G+ PN + +S VL ACS SGDL+ G
Sbjct: 407 KRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT-RPNEYTFSNVLAACSSSGDLEAGM 465
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
IH + +L + + N L+ MY KCGSL S + AS ++ WN+M+
Sbjct: 466 KIHGHVENSELASNVAVQNALVTMYAKCGSLELA----KSAFEASGRKDLVSWNAMIGAY 521
Query: 185 -------------------------------------------GKQVHAFCVK-RGFEKE 200
G+++H+ +K + F
Sbjct: 522 AQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSS 581
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ T+L++MY +CG ++ ++F M +RDV+SWT
Sbjct: 582 LMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWT------------------------ 617
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+M S Y ++ + L + G+ +
Sbjct: 618 ----------------------------AMTSAYAQQGHADQVLDLYLEMVLHGIRPNEI 649
Query: 321 TFTSALKACINLLNFNSRFALQVHG----LIVTSGYELDYIVGSNL--IDLYARLGNVKS 374
TFTS L C S L G L + S +E+ I L +DL R G ++
Sbjct: 650 TFTSILVGC-------SHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRD 702
Query: 375 ALELFHRLP-KKDVVAWSGLIMGCTKH 400
A L +P + D VAW ++ C H
Sbjct: 703 AEALVESMPYQPDSVAWLTVLGSCKTH 729
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 215/678 (31%), Positives = 325/678 (47%), Gaps = 90/678 (13%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+HCR+IK GL ++ NNL+++Y+ A KLFDEM + SW T+++AY
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
+ + ++ + + SV ++ ++ G I + RE +E +
Sbjct: 96 MDSSCEFFDRLPQRDSVS-----WTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLT 150
Query: 145 TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTL 204
+L ++ AA+ L GK+VH+F VK G
Sbjct: 151 NVL-----------------ASVAAT---------RCLETGKKVHSFIVKLGLRGNVSVS 184
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL++MY KCG+ +F+ M +D+ SW +A++ ++ +
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSW---------------NAMIALHMQVGQMD 229
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCIDSYTFT 323
A F+Q A ++ WNSMISGY + A+ + S + S + D +T
Sbjct: 230 LAMAQFEQM------AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLA 283
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL----- 378
S L AC NL Q+H IVT+G+++ IV + LI +Y+R G V++A L
Sbjct: 284 SVLSACANLEKLC--IGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 379 ----------------------------FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
F L +DVVAW+ +I+G +HGL A LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLF 401
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R M+ Q N + ++++L V S LASL GKQ+H VK G +LI MY K
Sbjct: 402 RSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G I F + ERD VSWT +I+ Q+G A+EA+ F+ M+ L+P+ IT++GV
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
SAC HAGLV + F MK + P L HY CMVDL G+AG +A++ I +MP +P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D W S+L AC + N L + AE+LL PE+ Y L+N+Y+ G W+ +K+RK
Sbjct: 582 DVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 650 AGKK-LGEKKAGMSWIEV 666
+ K +K+ G SWIEV
Sbjct: 642 SMKDGRVKKEQGFSWIEV 659
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 220/520 (42%), Gaps = 124/520 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA------------------DFTSLND-- 56
R ++ GK +H I+K GL ++ N+LL+MYA D +S N
Sbjct: 160 RCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMI 219
Query: 57 -----------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG 105
A F++MA ++IV+W +M++ Y A+ +++ ML + P+
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDR 279
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
F ++VL AC+ L +G IH I + +++N L+ MY +CG + R+L +Q
Sbjct: 280 FTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
G K + GF T+L+D Y+K G++++ +
Sbjct: 340 -------------------RGTKDLKI----EGF-------TALLDGYIKLGDMNEAKNI 369
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ + +RDVV+WT +IVG ++Q+ + +
Sbjct: 370 FDSLKDRDVVAWTAMIVG----------------------------YEQHGLYGEA---- 397
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ L+ SM+ EQ +SYT + L +L + Q+
Sbjct: 398 INLFRSMVG----EEQRP----------------NSYTLAAMLSVASSLASLG--HGKQI 435
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGL 402
HG V SG V + LI +YA+ G++ SA F + ++D V+W+ +I+ +HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A LF M+ + V C+ + +G+Q F + + +K TL+
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSH 553
Query: 463 ---LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D++ + G + + + MP E DVV+W ++ C
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 69/282 (24%)
Query: 321 TFTSALKACINLLN-----FNSRFALQ-VHGLIVTSGYELDYIVGSNLIDL--------- 365
+ ++ L+ C NLL N RF Q VH ++ SG + +NL+++
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALH 67
Query: 366 ----------------------YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
YA+ G++ S+ E F RLP++D V+W+ +I+G G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQY 127
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A + +M+ + +QF +++VL + L GK+VH+F VK G SL
Sbjct: 128 HKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 464 IDMYLKC-------------------------------GEIDDGLALFKFMPERDVVSWT 492
++MY KC G++D +A F+ M ERD+V+W
Sbjct: 188 LNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSAC 533
+I G Q G A+ F +M++ S L P+ T VLSAC
Sbjct: 248 SMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSAC 289
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/688 (29%), Positives = 349/688 (50%), Gaps = 73/688 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-------LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
C + RS+ QG+ +H ++ L+ + GN+L++MY + + A ++FDEM
Sbjct: 54 CSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMP 113
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW +++ A+ N R A+ L++ ML G+ + F + ++AC+ GD+ GR
Sbjct: 114 ARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA-ADQFALGSAVRACTELGDVGTGR 172
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H + + D ++ N L+ MY K G + LF++ + ++ W S+++
Sbjct: 173 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD------KDLISWGSIIA 226
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLI--------------DMYLKCGEIDD--------GL 221
G Q +GFE E + + + + CG + GL
Sbjct: 227 GFAQ-------QGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 279
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
++ + +RD + VGC +L DMY+ L AR F + +
Sbjct: 280 SI-KYRLDRD------LYVGC---------SLSDMYARFKNLDSARVAFYRIEA------ 317
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFA 340
++ WNS+++ Y + EA+ L S + SG+ D T L AC+ ++ R
Sbjct: 318 PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRL- 376
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+H +V G + D V ++L+ +YAR ++ SA+++FH + +DVV W+ ++ C +H
Sbjct: 377 --IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 434
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
LF + S +++ +++VL + L KQVHA+ K G + +
Sbjct: 435 NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS 494
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LID Y KCG +DD + LF+ M RDV SW+ +IVG Q G AKEA+ F M +
Sbjct: 495 NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGI 554
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+PN +TF+GVL+AC G V E ++ M+PEYG+ P EH C+VDLL +AG +A
Sbjct: 555 RPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAA 614
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
I +MPF+PD +W ++L A + HN+ ++ AE +L P + YV+L N+YA G
Sbjct: 615 NFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASG 674
Query: 640 MWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
W+ ++++KA + G KK+ G SW+++
Sbjct: 675 NWNEFARLKKAMRTSGVKKSPGKSWVKL 702
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 128/631 (20%), Positives = 238/631 (37%), Gaps = 127/631 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+R C + + G+ +H +K D+ N L++MY+ ++D LF+ + K+
Sbjct: 158 AVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKD 217
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SW +++ + A++++ M+ GS PN F + + +AC G + G IH
Sbjct: 218 LISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIH 277
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ +L+ D + +L DMY + +L Y A ++ WNS+++
Sbjct: 278 GLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAP----DLVSWNSIVNAYSVE 333
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
G+ +H++ VK G + +
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL+ MY +C ++ + +F+ + ++DVV+W I+ C +
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------------------- 433
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ EE + L S ++ S +D + +
Sbjct: 434 --------------------------------HNHPEEVLKLFSLLNKSEPSLDRISLNN 461
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
L A L F QVH +G D ++ + LID YA+ G++ A+ LF +
Sbjct: 462 VLSASAELGYF--EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 519
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+DV +WS LI+G + G A LF M + N VL CS + + G
Sbjct: 520 NRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 579
Query: 444 VHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
++ + G + ++D+ + G++ + MP E D++ W ++ +
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639
Query: 502 G------RAKEAI---------AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
RA E I AY N F + A R +G+ + +
Sbjct: 640 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 699
Query: 547 TSMKPEYGL-------EPHLEHYYCMVDLLG 570
+K E + P E Y M++L+G
Sbjct: 700 VKLKGELKVFIVEDRSHPESEEIYAMLELIG 730
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDDGLA 478
++++ CS L SL +G++VH V D L LI MY +C D
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MP R+ VSW +I QNGRA +A+ F M++S ++ + AC G
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 539 VEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
V + ++K E G + +++ +V + + G DD L + K D W S+
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIKDK-DLISWGSI 224
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA--TLGMWD 642
+ + +++ P+++ S A +G W+
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWE 271
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 328/659 (49%), Gaps = 38/659 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC +IK+G + + N L+++Y+ L A ++F M ++ VS+ ++++
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A+ L+ M + ++P+ +++L AC+ G L G +H + + D +
Sbjct: 340 QGFSDRALELFTKM-QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH----AFCVKR 195
L +LLD+Y KC + K F + N+ LWN ML Q+ +F + R
Sbjct: 399 LEGSLLDLYSKCADVETAHKFF------LXTETENIVLWNVMLVAYGQLDNLSDSFEIFR 452
Query: 196 GFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ E + T S++ G + G + T +I F+ + +
Sbjct: 453 QMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH-----------THVIKTGFQLNVYVC 501
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S L+DMY+ L A ++ + +V W +MI+GYV ++ EA+ L +
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPE------DDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ D+ F SA+ AC + R Q+H +G+ D + + LI LYAR G
Sbjct: 556 EYRGIQFDNIGFASAISACAGIRAL--RQGQQIHAQSYAAGFGADLSINNALISLYARCG 613
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ A F ++ K+ ++W+ L+ G + G A +F M+ + +VN F S +
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+ LA++++G+Q+H+ +K G++ E SLI +Y K G I D F M ER+V+S
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G Q+G EA+ F+EM + PN +TF+GVLSAC H GLV+E F SM
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+ L P EHY C+VDLLG+AG D A + I EMP D IW ++L AC H N ++
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIG 853
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
A LL PED + YV++SN+YA W RK K G KK G SWIEV +
Sbjct: 854 ERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKN 912
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 163/692 (23%), Positives = 297/692 (42%), Gaps = 109/692 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C S+ + LHCRI K G + ++L+ Y + A K+FDE + +++
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSV 124
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG--RLI 127
SW M+ + + K L+ ML G + PNG+ ++ VLKAC + GD+ + +
Sbjct: 125 FSWNKMIHVFVAQKSNFQVFCLFRRMLAEG-ITPNGYTFAGVLKAC-VGGDIAFNYVKQV 182
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNW------------- 167
H R + ++ N L+D+Y K G + +K+F+ W
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242
Query: 168 -----------AASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
A+ + + +S+LS G+Q+H +K GF E L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------CFECSC 247
+ +Y + ++ +F+ M RD VS+ +I G C + C
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362
Query: 248 FTLS-----------------------------------ALVDMYSNCNVLCEARKLFDQ 272
T++ +L+D+YS C + A K F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-- 420
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ N+ LWN M+ Y + ++ + + GM + +T+ S L+ C +L
Sbjct: 421 ----LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL 476
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+H ++ +G++L+ V S LID+YA+ G + AL + RLP+ DVV+W+
Sbjct: 477 GAL--YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +H + S A LF +M + +S + C+ + +LR+G+Q+HA G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + +LI +Y +CG I + F+ + +++ +SW ++ G Q+G +EA+ F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M+++ + N T+ +SA +++ I SM + G + E ++ L ++
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIH-SMVLKTGYDSEREVSNSLISLYAKS 713
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
G DA + +M + + W +M+ H
Sbjct: 714 GSISDAWREFNDMS-ERNVISWNAMITGYSQH 744
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 194/441 (43%), Gaps = 66/441 (14%)
Query: 221 LALFNFMPERDVVS----WTGIIVGC--------------------FECSCFTLSALVDM 256
+ L NFM ER V S + ++ GC F+ + +LVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y A K+FD+ S+ + V WN MI +V + N + L + + G+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRS------VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 317 IDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ YTF LKAC+ + FN + QVH G++ +V + LIDLY++ G ++SA
Sbjct: 157 PNGYTFAGVLKACVGGDIAFN--YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F+ + KD+V W +I G +++GL A LLF DM S +++SSVL + +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
G+Q+H +K GF E L+ +Y + ++ +F M RD VS+ +I
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFTSMK 550
G Q G + A+ F +M + LKP+ IT +LSAC H G+ + I M
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 551 PEYGLEPHLEHYY-------------------------CMVDLLGQAGCFDDAEQLIAEM 585
+ LE L Y M+ GQ D+ ++ +M
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 586 PFK---PDKTIWASMLKACET 603
+ P++ + S+L+ C +
Sbjct: 455 QMEGMIPNQFTYPSILRTCTS 475
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 192/496 (38%), Gaps = 106/496 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C ++ +G LH IK G+S DI +LL +Y+ + AHK F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+NIV W M+ AY + + ++ M G + PN F Y ++L+ C+ G L
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGAL 479
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLF-DQYSNWAASAYGN 174
LG IH + + + + + + L+DMY K G L R+L D +W A G
Sbjct: 480 YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGY 539
Query: 175 V---------ALWNSM------------------------LSGGKQVHAFCVKRGFEKED 201
V L+ M L G+Q+HA GF +
Sbjct: 540 VQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADL 599
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT-----------L 250
+LI +Y +CG I + F + +++ +SW ++ G + F
Sbjct: 600 SINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Query: 251 SALVDMY--------------------------------------SNCNVLCEARKLFDQ 272
A V+M+ S ++ ++ + D
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDA 719
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--I 330
+ + + NV WN+MI+GY + EA+ L + G+ + TF L AC I
Sbjct: 720 WREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHI 779
Query: 331 NLLN-----FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-K 384
L+ F S F ++H L+ S + Y+ ++DL R G + A+E +P
Sbjct: 780 GLVKEGLDYFESMF--KIHDLVPKSEH---YVC---VVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 385 KDVVAWSGLIMGCTKH 400
D + W L+ C H
Sbjct: 832 ADAMIWRTLLSACVIH 847
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 271/491 (55%), Gaps = 23/491 (4%)
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L + L GK+VHA F V LI MY KCG + D LF+ +P++D+ SW
Sbjct: 74 LRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWN 133
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+I G Y+N + +ARKLFD+ + + WN++ISGYV
Sbjct: 134 TMISG---------------YANVGRIEQARKLFDEM------PHRDNFSWNAVISGYVS 172
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
EA+ L + + + FT + + R ++HG ++ SG ELD
Sbjct: 173 QGWYMEALDLFRMMQENESS-NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDE 231
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+V + L+DLY + G++ A +F ++ KD+V+W+ +I C + G + LFRD++ S
Sbjct: 232 VVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGS 291
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N++ + VL C+ LA+ + GK+VH + + G++ ++L+ +Y KCG +
Sbjct: 292 GVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETA 351
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F MP D+VSWT +IVG QNG+ A+ +F+ +++S KP+EITF+GVLSAC HA
Sbjct: 352 RRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHA 411
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV+ F S+K ++GL +HY C++DLL ++G F +AE +I MP KPDK +WAS
Sbjct: 412 GLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWAS 471
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L C H N +L A+ L PE+P+ Y+ LSN+YA G+W +KVR G
Sbjct: 472 LLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGI 531
Query: 656 EKKAGMSWIEV 666
KK G SWIE+
Sbjct: 532 VKKPGKSWIEI 542
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 206/509 (40%), Gaps = 103/509 (20%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P+ +YS ++ AC L+LG+ +H V+ N L+ MY KCGSL +
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LFD+ ++ WN+M+SG Y G I+
Sbjct: 120 LFDEIPQ------KDLCSWNTMISG--------------------------YANVGRIEQ 147
Query: 220 GLALFNFMPERDVVSWTGIIVGCF---------------------ECSCFTL-------- 250
LF+ MP RD SW +I G C+ FTL
Sbjct: 148 ARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAA 207
Query: 251 ---------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+AL+D+Y C L EAR +FDQ A +
Sbjct: 208 AISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM------ADKD 261
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ W +MI + + +E +L + SG+ + YTF L AC +L + +V
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLA--AEQMGKEV 319
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG + GY+ S L+ +Y++ GN ++A +F+++P+ D+V+W+ LI+G ++G
Sbjct: 320 HGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQP 379
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTS 462
+A F ++ S ++ VL C+ + G + H+ K G
Sbjct: 380 DMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYAC 439
Query: 463 LIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+ID+ + G + + MP + D W ++ GC +G + A + + + L+P
Sbjct: 440 VIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE--LEP 497
Query: 522 -NEITFLGVLSACRHAGLVEEAWTIFTSM 549
N T++ + + +AGL E + M
Sbjct: 498 ENPATYITLSNIYANAGLWTEETKVRNDM 526
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 178/478 (37%), Gaps = 149/478 (31%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + R ++ GK +H I N L+ MYA SL DA LFDE+ +K++ SW
Sbjct: 73 CLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSW 132
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG----DLDL----- 123
TM++ Y + R A +L++ M + F ++AV+ G LDL
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHR-----DNFSWNAVISGYVSQGWYMEALDLFRMMQ 187
Query: 124 ---------------------------GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
G+ IH + R LE D V+ LLD+Y KCGSL
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247
Query: 157 T--RKLFDQYSN-----WAASAY----------GNVALWNSMLSG--------------- 184
R +FDQ ++ W + G + M SG
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307
Query: 185 --------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
GK+VH + + G++ ++L+ +Y KCG + +FN MP D+VSWT
Sbjct: 308 ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWT 367
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+IVG Y
Sbjct: 368 SLIVG----------------------------------------------------YAQ 375
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-------INLLNFNSRFALQVHGLIVT 349
N Q + A+ + SG D TF L AC I L F+S + HGL+ T
Sbjct: 376 NGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHS--VKEKHGLVHT 433
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ + + +IDL AR G K A + +P K D W+ L+ GC HG LA
Sbjct: 434 ADHY------ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 40/317 (12%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
++GK +H +I+ GL D LL +Y SLN+A +FD+MA K+IVSWTTM+
Sbjct: 213 RRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRC 272
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ R L+ ++ G V PN + ++ VL AC+ +G+ +H +TR +
Sbjct: 273 FEDGRKKEGFSLFRDLMGSG-VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331
Query: 140 TVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQV 188
+ + L+ +Y KCG+ R++F+Q ++ W S++ G Q
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPR------PDLVSWTSLIVGYAQNGQPDMALQF 385
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
++ G + +++T ++ G +D GL F+ + E+ + T C
Sbjct: 386 FESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYAC------ 439
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSS------WAA-----SAYGNVALWNSMISG-YVL 296
++D+ + EA + D WA+ +GN+ L + L
Sbjct: 440 ----VIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFEL 495
Query: 297 NEQNEEAITLLSHIHSS 313
+N LS+I+++
Sbjct: 496 EPENPATYITLSNIYAN 512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 99/275 (36%), Gaps = 75/275 (27%)
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+I+L+ + +K A++ HR+P+ +S LI C +H
Sbjct: 38 IIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRH--------------------- 76
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
L GK+VHA F + LI MY KCG + D LF
Sbjct: 77 --------------RKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFD 122
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+P++D+ SW +I G GR ++A F EM + ++ V+S G E
Sbjct: 123 EIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYME 178
Query: 542 AWTIFTSMKP-----------------------------------EYGLEPHLEHYYCMV 566
A +F M+ GLE + ++
Sbjct: 179 ALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALL 238
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
DL G+ G ++A + +M K D W +M+ C
Sbjct: 239 DLYGKCGSLNEARGIFDQMADK-DIVSWTTMIHRC 272
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 345/726 (47%), Gaps = 99/726 (13%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+ +H IK GL D+F L+++Y+ + DA LFD M +++V W M+ Y
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A +L++ G + P+ F +L S + D G+ + +++ +
Sbjct: 806 LGLEKEAFQLFSEFHRSG-LRPDEFSVQLILNGVS-EVNWDEGKWLADQV--QAYAAKLS 861
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM-------------------- 181
L + D++ L+ L WA +G + + +M
Sbjct: 862 LSDDNPDVFCWNKKLSECL------WAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVA 915
Query: 182 ----LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L GKQVH VK G + + SL++MY K G +FN M D++SW
Sbjct: 916 GTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNS 975
Query: 238 IIVGCFECSC--------------------FTLSA------------------------- 252
+I C + S FTL++
Sbjct: 976 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT 1035
Query: 253 -----------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
L+D+YS + EA LF ++A WN+M+ GY++ +
Sbjct: 1036 GNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDL------DLACWNAMMFGYIIGNDGK 1089
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A+ L S IH SG D T +A KAC L+ + Q+H + +G++ D V S
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ--GKQIHAHAIKAGFDSDLHVNSG 1147
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
++D+Y + G++ +A +F+ + D VAW+ +I GC +G A ++ M S +
Sbjct: 1148 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 1207
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
++ ++++K SC+ +L +G+Q+HA +K + TSL+DMY KCG I+D LFK
Sbjct: 1208 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 1267
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M R++ W ++VG Q+G A+EA+ F+ M ++P+ ++F+G+LSAC HAGL E
Sbjct: 1268 KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 1327
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
A+ SM +YG+EP +EHY C+VD LG+AG +A+++I MPFK +I ++L AC
Sbjct: 1328 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGAC 1387
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
+ + +A +L A P D + YV+LSN+YA WD ++ RK K+ KK G
Sbjct: 1388 RIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPG 1447
Query: 661 MSWIEV 666
SWI+V
Sbjct: 1448 FSWIDV 1453
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 262/598 (43%), Gaps = 62/598 (10%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK H RI+ G + D F NNLL+MY+ SL+ A ++FD +++V+W ++ AY +
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 82 NKRPN-----WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N + L+ +L + VLK C SG L +H + L
Sbjct: 700 SVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
E+D + L+++Y KCG + R LFD W +V LWN ML G V+
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFD----WMRER--DVVLWNMMLKG-------YVQ 805
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G EKE L S + + G D ++ + V+W
Sbjct: 806 LGLEKEAFQLFS---EFHRSGLRPDEFSVQLILNGVSEVNWD------------------ 844
Query: 255 DMYSNCNVLCEARKLFDQYSSWAA-----SAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
E + L DQ ++AA +V WN +S + N AI +
Sbjct: 845 ----------EGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVN 894
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
++ + D+ T L A + QVHG+ V SG + D V ++L+++Y+++
Sbjct: 895 MNGLNIDYDAVTLLVVLAAVAGTDDL--ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 952
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G A E+F+ + D+++W+ +I C + L + LF D+++ + F ++SVL
Sbjct: 953 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVL 1012
Query: 430 KVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+ CS L L +Q+H +K G + T+LID+Y K G++++ LF+ + D+
Sbjct: 1013 RACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDL 1072
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
W ++ G K+A+ F + +S K ++IT AC L+++ I +
Sbjct: 1073 ACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIH-A 1131
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ G + L ++D+ + G +A ++ PD W SM+ C + N
Sbjct: 1132 HAIKAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGN 1188
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 144/337 (42%), Gaps = 36/337 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A + CG + QGK +H IK G D+ + +L MY + +A +F+ ++
Sbjct: 1110 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 1169
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V+WT+M++ N + A+R+Y H + V P+ + ++ ++KA S L+ GR
Sbjct: 1170 APDDVAWTSMISGCVDNGNEDQALRIY-HRMRQSRVMPDEYTFATLIKASSCVTALEQGR 1228
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + + D + +L+DMY KCG++ D Y + N+ALWN+ML G
Sbjct: 1229 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE----DAYRLFKKMNVRNIALWNAMLVGL 1284
Query: 186 KQ-------VHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
Q V+ F + G E + V+ ++ G + + MP
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND-----Y 1339
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG--- 293
GI SC LVD ++ EA K+ + A+++ L I G
Sbjct: 1340 GIEPEIEHYSC-----LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 1394
Query: 294 ---------YVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ L + A LLS+I+++ D T
Sbjct: 1395 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 1431
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L+ +L GK HA V G + +L+ MY KCG + +F PERD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 488 VVSWTGIIVGCG-----QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+V+W I+ +G A+E + F+ + S +T VL C ++G + A
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + GLE + +V++ + G DA L M + D +W MLK
Sbjct: 747 EGVH-GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLKG 802
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 318/643 (49%), Gaps = 99/643 (15%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKL 160
PN ++ +L +C S RL+H RI + + + N L+D+Y KC L RKL
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF------------EKEDVTLTSLI 208
FD+ N WNS++S K GF E + + S++
Sbjct: 73 FDRMPQ------RNTFTWNSLIS-------VLTKSGFLDEAARLFGSMPEPDQCSWNSMV 119
Query: 209 DMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC--------------------FE 244
+ + ++ L F M D + S+ + C +
Sbjct: 120 SGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYS 179
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ SAL+DMYS C + A ++F + N+ WNS+I+ Y N EA+
Sbjct: 180 TDVYMGSALIDMYSKCGSVACAEEVF------SGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV-TSGYELDYIVGSNLI 363
+ + SG+ D T S + AC +L LQ+H +V T+ + D ++G+ L+
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKE--GLQIHARVVKTNKFRDDLVLGNALV 291
Query: 364 DLYA-------------------------------RLGNVKSALELFHRLPKKDVVAWSG 392
D+YA R +VK+A +F ++ +++VV+W+
Sbjct: 292 DMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA 351
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
LI G T++G N A LFR + + + ++L C+ LA L G+Q H +K+G
Sbjct: 352 LIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQG 411
Query: 453 FE-----KEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
FE + DI + SLIDMY+KCG I+DG +F+ M ERD VSW IIVG QNG E
Sbjct: 412 FEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAE 471
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F++M+ KP+ +T +GVL AC HAGLVEE F SM+ E+GL P +HY CMV
Sbjct: 472 ALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMV 530
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AGC ++A+ LI MP PD +W S+L AC+ H N ++ AE+LL P +
Sbjct: 531 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSG 590
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN+YA LG W + +VRK ++ G K+ G SWIEV S
Sbjct: 591 PYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVES 633
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/577 (24%), Positives = 250/577 (43%), Gaps = 113/577 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + RS + + +H RI+ S +IF N L+ +Y L+DA KLFD M ++N
Sbjct: 22 LDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNT 81
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE---------------YGSVEP----------- 103
+W ++++ T + + A RL+ M E + E
Sbjct: 82 FTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHRE 141
Query: 104 ----NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-- 157
N + + + L AC+ DL++G +H +++ + D + + L+DMY KCGS+
Sbjct: 142 DFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACA 201
Query: 158 RKLFDQYSNWAASAYGNVALWNSM------------------------------------ 181
++F + N+ WNS+
Sbjct: 202 EEVF------SGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 182 --------LSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDV 232
L G Q+HA VK ++D+ L +L+DMY KC ++++ +F+ M R+V
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
VS T ++ G Y+ + AR +F + + NV WN++I+
Sbjct: 316 VSETSMVSG---------------YARAASVKAARFMFSKMTQ------RNVVSWNALIA 354
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY N +NEEA+ L + + YTF + L AC NL + Q H ++ G+
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADL--LLGRQAHTHVLKQGF 412
Query: 353 EL------DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
E D VG++LID+Y + G+++ +F ++ ++D V+W+ +I+G ++G + A
Sbjct: 413 EFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEA 472
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+FR M+ + + + VL CS + G+ + G T ++D+
Sbjct: 473 LQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDL 532
Query: 467 YLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ G +++ L + MP D V W ++ C +G
Sbjct: 533 LGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 188/476 (39%), Gaps = 142/476 (29%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G +H + K S D++ G+ L+ MY+ S+ A ++F M +N
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W +++T Y N + A+ ++ M++ G +EP+ ++V+ AC+ L G IH
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSG-LEPDEVTLASVVSACASLCALKEGLQIH 271
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------YSNWAASA-- 171
R+ + K D VL N L+DMY KC + R++FD+ S +A +A
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 172 -----------YGNVALWNSMLSG------------------------------------ 184
NV WN++++G
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Query: 185 --------GKQVHAFCVKRGFE-----KEDVTL-TSLIDMYLKCGEIDDGLALFNFMPER 230
G+Q H +K+GFE + D+ + SLIDMY+KCG I+DG +F M ER
Sbjct: 392 ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 451
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D VSW IIVG +A + YG
Sbjct: 452 DCVSWNAIIVG----------------------------------YAQNGYG-------- 469
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSR---FALQVHGL 346
EA+ + + G D T L AC + L R F+++ HGL
Sbjct: 470 ----------AEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGL 519
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
I + + ++DL R G + A L +P D V W L+ C HG
Sbjct: 520 IPLKDHY------TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
KHGL YL N + +L C S R + VHA + F E
Sbjct: 2 AKHGLVRDLYL-----------PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEI 50
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPER------------------------------- 486
LID+Y KC +DD LF MP+R
Sbjct: 51 FIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEP 110
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
D SW ++ G Q+ R +E++ YF +M + NE +F LSAC AGL++
Sbjct: 111 DQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMD 162
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 328/659 (49%), Gaps = 38/659 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC +IK+G + + N L+++Y+ L A ++F M ++ VS+ ++++
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A+ L+ M + ++P+ +++L AC+ G L G +H + + D +
Sbjct: 340 QGFSDRALELFTKM-QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH----AFCVKR 195
L +LLD+Y KC + K F + N+ LWN ML Q+ +F + R
Sbjct: 399 LEGSLLDLYSKCADVETAHKFF------LTTETENIVLWNVMLVAYGQLDNLSDSFEIFR 452
Query: 196 GFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ E + T S++ G + G + T +I F+ + +
Sbjct: 453 QMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH-----------THVIKTGFQLNVYVC 501
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S L+DMY+ L A ++ + +V W +MI+GYV ++ EA+ L +
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPE------DDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ D+ F SA+ AC + R Q+H +G+ D + + LI LYAR G
Sbjct: 556 EYRGIQFDNIGFASAISACAGIRAL--RQGQQIHAQSYAAGFGADLSINNALISLYARCG 613
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ A F ++ K+ ++W+ L+ G + G A +F M+ + +VN F S +
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+ LA++++G+Q+H+ +K G++ E SLI +Y K G I D F M ER+V+S
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G Q+G EA+ F+EM + PN +TF+GVLSAC H GLV+E F SM
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+ L P EHY C+VDLLG+AG D A + I EMP D IW ++L AC H N ++
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIG 853
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
A LL PED + YV++SN+YA W RK K G KK G SWIEV +
Sbjct: 854 ERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKN 912
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 163/692 (23%), Positives = 297/692 (42%), Gaps = 109/692 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C S+ + LHCRI K G + ++L+ Y + A K+FDE + +++
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSV 124
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG--RLI 127
SW M+ + + K L+ ML G + PNG+ ++ VLKAC + GD+ + +
Sbjct: 125 FSWNKMIHVFVAQKSNFQVFCLFRRMLAEG-ITPNGYTFAGVLKAC-VGGDIAFNYVKQV 182
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNW------------- 167
H R + ++ N L+D+Y K G + +K+F+ W
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242
Query: 168 -----------AASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
A+ + + +S+LS G+Q+H +K GF E L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------CFECSC 247
+ +Y + ++ +F+ M RD VS+ +I G C + C
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362
Query: 248 FTLS-----------------------------------ALVDMYSNCNVLCEARKLFDQ 272
T++ +L+D+YS C + A K F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-- 420
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ N+ LWN M+ Y + ++ + + GM + +T+ S L+ C +L
Sbjct: 421 ----LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL 476
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+H ++ +G++L+ V S LID+YA+ G + AL + RLP+ DVV+W+
Sbjct: 477 GAL--YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +H + S A LF +M + +S + C+ + +LR+G+Q+HA G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + +LI +Y +CG I + F+ + +++ +SW ++ G Q+G +EA+ F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M+++ + N T+ +SA +++ I SM + G + E ++ L ++
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIH-SMVLKTGYDSEREVSNSLISLYAKS 713
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
G DA + +M + + W +M+ H
Sbjct: 714 GSISDAWREFNDMS-ERNVISWNAMITGYSQH 744
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 194/441 (43%), Gaps = 66/441 (14%)
Query: 221 LALFNFMPERDVVS----WTGIIVGC--------------------FECSCFTLSALVDM 256
+ L NFM ER V S + ++ GC F+ + +LVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y A K+FD+ S+ + V WN MI +V + N + L + + G+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRS------VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 317 IDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ YTF LKAC+ + FN + QVH G++ +V + LIDLY++ G ++SA
Sbjct: 157 PNGYTFAGVLKACVGGDIAFN--YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F+ + KD+V W +I G +++GL A LLF DM S +++SSVL + +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
G+Q+H +K GF E L+ +Y + ++ +F M RD VS+ +I
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFTSMK 550
G Q G + A+ F +M + LKP+ IT +LSAC H G+ + I M
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 551 PEYGLEPHLEHYY-------------------------CMVDLLGQAGCFDDAEQLIAEM 585
+ LE L Y M+ GQ D+ ++ +M
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 586 PFK---PDKTIWASMLKACET 603
+ P++ + S+L+ C +
Sbjct: 455 QMEGMIPNQFTYPSILRTCTS 475
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 192/496 (38%), Gaps = 106/496 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C ++ +G LH IK G+S DI +LL +Y+ + AHK F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+NIV W M+ AY + + ++ M G + PN F Y ++L+ C+ G L
Sbjct: 421 LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGAL 479
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLF-DQYSNWAASAYGN 174
LG IH + + + + + + L+DMY K G L R+L D +W A G
Sbjct: 480 YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGY 539
Query: 175 V---------ALWNSM------------------------LSGGKQVHAFCVKRGFEKED 201
V L+ M L G+Q+HA GF +
Sbjct: 540 VQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADL 599
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT-----------L 250
+LI +Y +CG I + F + +++ +SW ++ G + F
Sbjct: 600 SINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Query: 251 SALVDMY--------------------------------------SNCNVLCEARKLFDQ 272
A V+M+ S ++ ++ + D
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDA 719
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--I 330
+ + + NV WN+MI+GY + EA+ L + G+ + TF L AC I
Sbjct: 720 WREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHI 779
Query: 331 NLLN-----FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-K 384
L+ F S F ++H L+ S + Y+ ++DL R G + A+E +P
Sbjct: 780 GLVKEGLDYFESMF--KIHDLVPKSEH---YVC---VVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 385 KDVVAWSGLIMGCTKH 400
D + W L+ C H
Sbjct: 832 ADAMIWRTLLSACVIH 847
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/750 (28%), Positives = 342/750 (45%), Gaps = 118/750 (15%)
Query: 1 MDLRRIVEALRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
D R LR C G S + + +H + I G F N L+ +Y L+ A K
Sbjct: 161 FDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKK 220
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F+ + ++ VSW M++ + N A+ L+ + VL AC+
Sbjct: 221 VFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI---------------VLSACTKVE 265
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLF------------DQYS 165
+ G+ +H + ++ +T + N L+ +Y + G+L+ ++F S
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325
Query: 166 NWAASAYGN--VALWNSM------------------------LSGGKQVHAFCVKRGFEK 199
A Y N +AL+ M L GKQ H++ +K G
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385
Query: 200 EDVTLTSLIDMYLKCGEI----------------DDGLALFNFMPERDVV----SWTGII 239
+ V SL+D+Y+KC +I + +F M +V ++ I+
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSIL 445
Query: 240 VGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
C F+ + + S L+DMY+ L A K+F +
Sbjct: 446 KTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE---- 501
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V W +MI+GY +++ EA+ L + G+ D+ F SA+ AC + +
Sbjct: 502 --NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ-- 557
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q+H SGY D +G+ L+ LYAR G V+ A F ++ KD V+W+ L+ G +
Sbjct: 558 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ 617
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G A +F M + ++N F S + + +A++R GKQ+H K G++ E
Sbjct: 618 SGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEV 677
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LI +Y KCG IDD +SW +I G Q+G EA+ F++M Q +
Sbjct: 678 SNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDV 724
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
PN +TF+GVLSAC H GLV+E + F SM + L P EHY C+VDLLG++G A+
Sbjct: 725 LPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAK 784
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ + EMP +PD +W ++L AC H N + A LL P+D + YV++SN+YA G
Sbjct: 785 RFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSG 844
Query: 640 MWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
WD + R+ K G KK G SW+EV +
Sbjct: 845 KWDCRDRTRQMMKDRGVKKEPGRSWVEVDN 874
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 190/438 (43%), Gaps = 45/438 (10%)
Query: 238 IIVGCFECSCFTLS-ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
++ GC F L+D Y L A +FD+ + S WN + + ++
Sbjct: 87 LLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSC------WNRIFNTFIA 140
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI-NLLNFNSRFALQVHGLIVTSGYELD 355
L + + + D F L+ C N ++F RF Q+H +TSG+E
Sbjct: 141 ERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSF--RFVEQIHAKTITSGFESS 198
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+ + LIDLY + G + SA ++F L +D V+W +I G +++G A LLF +
Sbjct: 199 TFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI-- 256
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
VL C+ + GKQ+H +K+GF E +L+ +Y + G +
Sbjct: 257 ------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSS 304
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M +RD VS+ +I G Q G A+A F++M KP+ +T +LSAC
Sbjct: 305 AEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACAS 364
Query: 536 AGLVE-----EAWTIFTSMKPEYGLEPHLEHYYCMVDLL----------GQAGCFDDAEQ 580
G + ++ I M + +E L Y + GQ + + Q
Sbjct: 365 VGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQ 424
Query: 581 LIAEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVY 635
+ +M + P++ + S+LK C T T L I Q+L T + + YV +L ++Y
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ-FNVYVSSVLIDMY 483
Query: 636 ATLGMWDSLSKVRKAGKK 653
A G D K+ + K+
Sbjct: 484 AKHGKLDHALKIFRRLKE 501
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/671 (30%), Positives = 352/671 (52%), Gaps = 38/671 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + I GKS+H +K GL D+F GN ++++Y L++A +LFD+M +N+
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNL 276
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SW +++ ++ N A R + +LE G + P+ +L CS G++D+G +IH
Sbjct: 277 ISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIH 336
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSGGK 186
+ L ++ ++ N L+DMY KCG L+ LF + N +V WNSM+
Sbjct: 337 GMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN------KSVVSWNSMIGAYS 390
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGI---- 238
+ GF E L + M + E+++ + + N +P E +++S +
Sbjct: 391 -------REGFVFETFDLLRKMWMEEELMEVNE-VTILNLLPACLEESELLSLRALHGYS 442
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ F+ +A + Y+ C L A +F ++ + S+ WN++I G+ N
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS------WNAVIGGHAQNG 496
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDY 356
+A+ + G+ D ++ S L AC + LL + ++HG ++ +G E++
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK----EIHGFVLRNGLEMNS 552
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V +L+ LY F + K+ V W+ ++ G +++ L + A LFR M++
Sbjct: 553 FVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD 612
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ I+S+L CS L++L GK+VH F +K +++ SL+DMY K G +
Sbjct: 613 GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHS 672
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F + ++V SW +I G G +G+ +A+ F++M +S +P+ TFLGVL AC HA
Sbjct: 673 QRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHA 732
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E M+ Y LEP LEHY C++D+LG+AG ++A I EMP +PD IW+S
Sbjct: 733 GLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSS 792
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L + T+ + ++ AE+LLA Y++LSN+YAT G WD + VR+ K L
Sbjct: 793 LLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSL 852
Query: 656 EKKAGMSWIEV 666
+K G SWIE+
Sbjct: 853 QKDVGCSWIEL 863
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/573 (23%), Positives = 236/573 (41%), Gaps = 107/573 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CGQ ++++ G+ L + + S D L++MY+ ++ +FD + KN
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +V+ Y N+ + AI + ++ +P+ F + ++KAC+ D+ LG+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ L D + N ++ +Y KCG L +LFD+ N+ WNS++ G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ------NLISWNSLIRGFS 287
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G +H VK G E
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ +LIDMY KCG + + LF + + VVSW ++++ YS
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSW---------------NSMIGAYSRE 392
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ E L + +W EE + M ++
Sbjct: 393 GFVFETFDLLRK-------------MW------------MEEEL----------MEVNEV 417
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T + L AC+ S AL HG + ++ ++ + I YA+ G++ A +F
Sbjct: 418 TILNLLPACLEESELLSLRAL--HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFF 475
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ K V +W+ +I G ++G A + +M + F I S+L C L L+
Sbjct: 476 GMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQY 535
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK++H F ++ G E SL+ +Y C + G F+ M +++ V W ++ G Q
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQ 595
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
N EA++ F++M+ L+P+EI +L AC
Sbjct: 596 NELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 219/503 (43%), Gaps = 37/503 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C ++ G +H +K GL ++ N L+ MY+ L++A LF
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
++ K++VSW +M+ AY+ L M +E +E N +L AC +
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L R +H R +Y ++ N + Y KCGSL +F ++ + + +V+ WN+
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL---VFAEHVFFGMNT-KSVSSWNA 487
Query: 181 MLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-R 230
++ G G + A + G +D ++ SL+ L CG L L + E
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL---LACGR----LGLLQYGKEIH 540
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
V G+ E + F +L+ +Y +C+ R F+ N WN+M
Sbjct: 541 GFVLRNGL-----EMNSFVAVSLLSLYFHCSKPFYGRTYFETMGD------KNSVCWNAM 589
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SGY NE EA++L + S G+ D S L AC L +VH + +
Sbjct: 590 LSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG--LGKEVHCFALKN 647
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
D V +L+D+YA+ G + + +F+RL K+V +W+ +I G HG + A LF
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELF 707
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLK 469
DM S++ ++F VL+ C + G A E E +IDM +
Sbjct: 708 EDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGR 767
Query: 470 CGEIDDGLALFKFMPER-DVVSW 491
G +++ L MPE D W
Sbjct: 768 AGRLNEALNFINEMPEEPDAKIW 790
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/680 (31%), Positives = 353/680 (51%), Gaps = 42/680 (6%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
R +V L CG+ ++ G+ +H ++ GL D + G L+ Y F ++ +H++F
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFS 220
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +NIVSW ++T + + A++LY+ ML G ++ + V++AC+ G L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG-IKFDAVTMLVVIQACAEYGCLR 279
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA---ASAYGNVALWN 179
LG +H+ + L D ++N LL+MY GSL S+WA A + ALWN
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLE-------SSWALFNAVPTSDAALWN 332
Query: 180 SMLSG--GKQVHA----FCVKRGFE--KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
SM+S G HA +K E KEDV ++ M C +++DG +
Sbjct: 333 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAI--MLSLCNDLNDGSIWGRGLHAHA 390
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ S GI E + +AL+ MY N + A+ +F++ +V WN+MI
Sbjct: 391 MKS--GI-----ELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL------DVISWNTMI 437
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S + + +A L + S + +SYT S L C + + F +HG + +G
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKD--GSDLVFGRSIHGFAIKNG 495
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E++ + ++L ++Y G+ ++A +F R P++D+V+W+ LI K+ A LLF
Sbjct: 496 LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFN 555
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-DITLT-SLIDMYLK 469
MI S + N I ++L C+ LA L G+ +HA+ +R E D +L + I MY +
Sbjct: 556 HMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYAR 614
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG++ +F + R +VSW +I G G +GR ++A F +M+ KPN ++F V
Sbjct: 615 CGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASV 674
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H+GL +F SM ++G+ P L HY CMVDLLG+ G F +A I MP +P
Sbjct: 675 LSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEP 734
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D +IW ++L +C+ +N KL+ I +L+ P +P +++LSN+YA G+W + ++RK
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794
Query: 650 AGKKLG-EKKAGMSWIEVSS 668
++ G K G SWI + +
Sbjct: 795 WLRERGLGKPPGTSWIVIGN 814
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 167/669 (24%), Positives = 265/669 (39%), Gaps = 157/669 (23%)
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
W +++ +T K + + Y M G + P+ VLKAC + G IH I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLG-ITPDSATMPLVLKACGRLNAIGNGVRIHSCI 86
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG----- 184
L D + L+D Y KCG + K+F + ++ WN+++SG
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPE------RDLVSWNALISGYVGCL 140
Query: 185 ---------------------------------------GKQVHAFCVKRG-FEKEDVTL 204
G+++H +C++ G F+ +
Sbjct: 141 CYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200
Query: 205 TSLIDMYLKCGEIDDGLA--LFNFMPERDVVSWTGIIVG--------------------- 241
T+L+ Y++ D L+ +F+ M R++VSW II G
Sbjct: 201 TALVGFYMR---FDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG 257
Query: 242 --------------CFECSC--------------------FTLSALVDMYSNCNVLCEAR 267
C E C F L+AL++MYS+ L +
Sbjct: 258 IKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSW 317
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
LF+ A + ALWNSMIS Y+ + EAI L + + D T L
Sbjct: 318 ALFN------AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLS 371
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C N LN S + +H + SG ELD +G+ L+ +Y + + +A +F ++ DV
Sbjct: 372 LC-NDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDV 430
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
++W+ +I + + A+ LF M S N + I S+L C + L G+ +H F
Sbjct: 431 ISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGF 490
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+K G E TSL +MY+ CG+ +F P+RD+VSW +I +N A +A
Sbjct: 491 AIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKA 550
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRH-----AGLVEEAWTI---------------FT 547
+ F MI S L+PN +T + +L++C G A+T F
Sbjct: 551 LLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFI 609
Query: 548 SMKPEYGLEPHLEHYYC------------MVDLLGQAGCFDDAEQLIAEM---PFKPDKT 592
+M G + E +C M+ G G DA A+M FKP+
Sbjct: 610 TMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNV 669
Query: 593 IWASMLKAC 601
+AS+L AC
Sbjct: 670 SFASVLSAC 678
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/594 (22%), Positives = 229/594 (38%), Gaps = 112/594 (18%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ ++ C + ++ G LH IK+ L D+F N LL+MY+D SL + LF
Sbjct: 261 DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALF 320
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + + W +M+++Y AI L+ M ++ + + +L C+ D
Sbjct: 321 NAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM-RLERIKEDVRTIAIMLSLCNDLNDG 379
Query: 122 DL-GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
+ GR +H + +E D L N LL MYVK +T + +F++ +V W
Sbjct: 380 SIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL------DVISW 433
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+M+S G+ +H F +K
Sbjct: 434 NTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIK 493
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G E TSL +MY+ CG+ +F P+RD+VSW +I
Sbjct: 494 NGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLI--------------- 538
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
S Y+ N+ +A+ L +H+ S
Sbjct: 539 -------------------------------------SSYIKNDNAGKALLLFNHMISE- 560
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ +S T + L +C L + L + E+D + + I +YAR G ++
Sbjct: 561 LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQY 620
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ++F L + +V+W+ +I G HG A L F M++ N +SVL CS
Sbjct: 621 AEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSH 680
Query: 435 LASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
G Q+ H+ G + ++D+ + G + +A MP E D W
Sbjct: 681 SGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWR 740
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTI 545
++ C K F ++++ L+P N F+ + + AGL E I
Sbjct: 741 ALLSSCQIKSNNKLLETIFGKLVE--LEPSNPGNFILLSNIYAAAGLWSEVVQI 792
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 340/647 (52%), Gaps = 45/647 (6%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ + N ++S Y +L +A KLFD M + V+WT ++ Y+ + A L+ M
Sbjct: 81 KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLM--NTLLDMYVK 152
G+ EP+ + +L C+ ++G I + T+ KL YD+ L+ NTL+D Y K
Sbjct: 141 QRCGT-EPDYVTFVTLLSGCN---GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK 196
Query: 153 CGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKED 201
L +LF + + +Y N+M++G K V+ F + G + +
Sbjct: 197 SNRLDLACQLFKEMPEIDSVSY------NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTE 250
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
T +++ + +I G + +F +I F + F +AL+D YS +
Sbjct: 251 FTFAAVLCANIGLDDIVLGQQIHSF-----------VIKTNFVWNVFVSNALLDFYSKHD 299
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +ARKLFD+ +Y N +ISGY + +++ A L + + +
Sbjct: 300 SVIDARKLFDEMPEQDGVSY------NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP 353
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F + L N L++ Q+H + + + + +VG++L+D+YA+ G + A +F
Sbjct: 354 FATMLSIASNTLDW--EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 411
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
L + V W+ +I + G LF M ++ +Q +S+L+ + +ASL G
Sbjct: 412 LTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG 471
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
KQ+H+F +K GF + ++L+D+Y KCG I D + F+ MP+R++VSW +I QN
Sbjct: 472 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 531
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G A+ + F+EM+ S L+P+ ++FLGVLSAC H+GLVEE F SM Y L+P EH
Sbjct: 532 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREH 591
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y +VD+L ++G F++AE+L+AEMP PD+ +W+S+L AC H N +L A+QL
Sbjct: 592 YASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNME 651
Query: 622 P-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
D + YV +SN+YA G W+++SKV KA + G KK SW+E+
Sbjct: 652 ELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEI 698
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 219/546 (40%), Gaps = 111/546 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V L C Q + +IIK G + GN L+ Y L+ A +LF
Sbjct: 148 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 207
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM + VS+ M+T Y+ + A+ L+ M G ++P F ++AVL A D+
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG-LKPTEFTFAAVLCANIGLDDI 266
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL-- 177
LG+ IH + + ++ + N LLD Y K S+ RKLFD+ +Y NV +
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY-NVIISG 325
Query: 178 --WN--------------------------SMLS---------GGKQVHAFCVKRGFEKE 200
W+ +MLS G+Q+HA + + E
Sbjct: 326 YAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 385
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ SL+DMY KCG+ ++ +F + R V WT +I
Sbjct: 386 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMI--------------------- 424
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
S YV EE + L + + + + D
Sbjct: 425 -------------------------------SAYVQKGFYEEGLQLFNKMRQASVIADQA 453
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF S L+A ++ + + Q+H I+ SG+ + GS L+D+YA+ G++K A++ F
Sbjct: 454 TFASLLRASASIASLS--LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 511
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+P +++V+W+ +I ++G F++M+ S + VL CS +
Sbjct: 512 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 571
Query: 441 G-------KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
G Q++ +R S++DM + G ++ L MP + D + W+
Sbjct: 572 GLWHFNSMTQIYKLDPRREH------YASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 625
Query: 493 GIIVGC 498
++ C
Sbjct: 626 SVLNAC 631
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 192/444 (43%), Gaps = 45/444 (10%)
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+ A VK GF+ + + +LK GE+ LF MP ++ VS +I G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG------ 92
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
Y L EARKLFD A W +I GY Q +EA L
Sbjct: 93 ---------YVKSGNLGEARKLFDGMVERTA------VTWTILIGGYSQLNQFKEAFELF 137
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G D TF + L C N ++ QV I+ GY+ IVG+ L+D Y
Sbjct: 138 VQMQRCGTEPDYVTFVTLLSGC-NGHEMGNQIT-QVQTQIIKLGYDSRLIVGNTLVDSYC 195
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ + A +LF +P+ D V+++ +I G +K GL+ A LF +M NS +F ++
Sbjct: 196 KSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAA 255
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL L + G+Q+H+F +K F +L+D Y K + D LF MPE+D
Sbjct: 256 VLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 315
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-----GLVEEA 542
VS+ II G +G+ K A F+E+ + + F +LS + G A
Sbjct: 316 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 375
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-- 600
TI T+ E + L VD+ + G F++AE + + + W +M+ A
Sbjct: 376 QTIVTTADSEILVGNSL------VDMYAKCGKFEEAEMIFTNLTHR-SAVPWTAMISAYV 428
Query: 601 --------CETHNNTKLVSIIAEQ 616
+ N + S+IA+Q
Sbjct: 429 QKGFYEEGLQLFNKMRQASVIADQ 452
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 179/435 (41%), Gaps = 113/435 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H +IK ++F N LL Y+ S+ DA KLFDEM ++ VS+ +++ Y
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAW 328
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ + +A L+ L++ + + F ++ +L S + D ++GR IH + + + +
Sbjct: 329 DGKHKYAFDLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 142 LMNTLLDMYVKCGSLTRK--LFDQYSN-----WAA--SAY-------GNVALWNSM---- 181
+ N+L+DMY KCG +F ++ W A SAY + L+N M
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
LS GKQ+H+F +K GF + ++L+D+Y KCG I D +
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F MP+R++VSW +I
Sbjct: 508 QTFQEMPDRNIVSWNAMI------------------------------------------ 525
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLN 334
S Y N + E + + SG+ DS +F L AC + L +
Sbjct: 526 ----------SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH 575
Query: 335 FNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
FNS +T Y+LD ++++D+ R G A +L +P D + WS
Sbjct: 576 FNS----------MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 625
Query: 392 GLIMGCTKHGLNSLA 406
++ C H LA
Sbjct: 626 SVLNACRIHKNQELA 640
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 38/257 (14%)
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
++V+ F+ SS L+ S L + A VK GF+ + + +LK GE+
Sbjct: 15 KNVSTFLKSSSLQ--SPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQAR 72
Query: 478 ALFKFMP-------------------------------ERDVVSWTGIIVGCGQNGRAKE 506
LF+ MP ER V+WT +I G Q + KE
Sbjct: 73 QLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKE 132
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A F +M + +P+ +TF+ +LS C + + + T + + G + L +V
Sbjct: 133 AFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQI-IKLGYDSRLIVGNTLV 191
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAEQLLATSPEDP 625
D ++ D A QL EMP + D + +M+ + K V++ E + S P
Sbjct: 192 DSYCKSNRLDLACQLFKEMP-EIDSVSYNAMITGYSKDGLDEKAVNLFVE--MQNSGLKP 248
Query: 626 SKYVMLSNVYATLGMWD 642
+++ + + A +G+ D
Sbjct: 249 TEFTFAAVLCANIGLDD 265
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/680 (31%), Positives = 353/680 (51%), Gaps = 42/680 (6%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
R +V L CG+ ++ G+ +H ++ GL D + G L+ Y F ++ +H++F
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFS 220
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +NIVSW ++T + + A++LY+ ML G ++ + V++AC+ G L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG-IKFDAVTMLVVIQACAEYGCLR 279
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA---ASAYGNVALWN 179
LG +H+ + L D ++N LL+MY GSL S+WA A + ALWN
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLE-------SSWALFNAVPTSDAALWN 332
Query: 180 SMLSG--GKQVHA----FCVKRGFE--KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
SM+S G HA +K E KEDV ++ M C +++DG +
Sbjct: 333 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAI--MLSLCNDLNDGSIWGRGLHAHA 390
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ S GI E + +AL+ MY N + A+ +F++ +V WN+MI
Sbjct: 391 MKS--GI-----ELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL------DVISWNTMI 437
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S + + +A L + S + +SYT S L C + + F +HG + +G
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKD--GSDLVFGRSIHGFAIKNG 495
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E++ + ++L ++Y G+ ++A +F R P++D+V+W+ LI K+ A LLF
Sbjct: 496 LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFN 555
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-DITLT-SLIDMYLK 469
MI S + N I ++L C+ LA L G+ +HA+ +R E D +L + I MY +
Sbjct: 556 HMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYAR 614
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG++ +F + R +VSW +I G G +GR ++A F +M+ KPN ++F V
Sbjct: 615 CGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASV 674
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H+GL +F SM ++G+ P L HY CMVDLLG+ G F +A I MP +P
Sbjct: 675 LSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEP 734
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D +IW ++L +C+ +N KL+ I +L+ P +P +++LSN+YA G+W + ++RK
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794
Query: 650 AGKKLG-EKKAGMSWIEVSS 668
++ G K G SWI + +
Sbjct: 795 WLRERGLGKPPGTSWIVIGN 814
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 165/667 (24%), Positives = 263/667 (39%), Gaps = 153/667 (22%)
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
W +++ +T K + + Y M G + P+ VLKAC + G IH I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLG-ITPDSATMPLVLKACGRLNAIGNGVRIHSFI 86
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG----- 184
L D + L+D Y KCG + K+F + ++ WN+++SG
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPE------RDLVSWNALISGYVGCL 140
Query: 185 ---------------------------------------GKQVHAFCVKRG-FEKEDVTL 204
G+++H +C++ G F+ +
Sbjct: 141 CYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------------- 241
T+L+ Y++ + +F+ M R++VSW II G
Sbjct: 201 TALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIK 259
Query: 242 ------------CFECSC--------------------FTLSALVDMYSNCNVLCEARKL 269
C E C F L+AL++MYS+ L + L
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F+ A + ALWNSMIS Y+ + EAI L + + D T L C
Sbjct: 320 FN------AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLC 373
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
N LN S + +H + SG ELD +G+ L+ +Y + + +A +F ++ DV++
Sbjct: 374 -NDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVIS 432
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I + + A+ LF M S N + I S+L C + L G+ +H F +
Sbjct: 433 WNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAI 492
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G E TSL +MY+ CG+ +F P+RD+VSW +I +N A +A+
Sbjct: 493 KNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALL 552
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRH-----AGLVEEAWTI---------------FTSM 549
F MI S L+PN +T + +L++C G A+T F +M
Sbjct: 553 LFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITM 611
Query: 550 KPEYGLEPHLEHYYC------------MVDLLGQAGCFDDAEQLIAEM---PFKPDKTIW 594
G + E +C M+ G G DA A+M FKP+ +
Sbjct: 612 YARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSF 671
Query: 595 ASMLKAC 601
AS+L AC
Sbjct: 672 ASVLSAC 678
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/594 (22%), Positives = 229/594 (38%), Gaps = 112/594 (18%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ ++ C + ++ G LH IK+ L D+F N LL+MY+D SL + LF
Sbjct: 261 DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALF 320
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + + W +M+++Y AI L+ M ++ + + +L C+ D
Sbjct: 321 NAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM-RLERIKEDVRTIAIMLSLCNDLNDG 379
Query: 122 DL-GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
+ GR +H + +E D L N LL MYVK +T + +F++ +V W
Sbjct: 380 SIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL------DVISW 433
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+M+S G+ +H F +K
Sbjct: 434 NTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIK 493
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G E TSL +MY+ CG+ +F P+RD+VSW +I
Sbjct: 494 NGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLI--------------- 538
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
S Y+ N+ +A+ L +H+ S
Sbjct: 539 -------------------------------------SSYIKNDNAGKALLLFNHMISE- 560
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ +S T + L +C L + L + E+D + + I +YAR G ++
Sbjct: 561 LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQY 620
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ++F L + +V+W+ +I G HG A L F M++ N +SVL CS
Sbjct: 621 AEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSH 680
Query: 435 LASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
G Q+ H+ G + ++D+ + G + +A MP E D W
Sbjct: 681 SGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWR 740
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTI 545
++ C K F ++++ L+P N F+ + + AGL E I
Sbjct: 741 ALLSSCQIKSNNKLLETIFGKLVE--LEPSNPGNFILLSNIYAAAGLWSEVVQI 792
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 211/664 (31%), Positives = 347/664 (52%), Gaps = 51/664 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
K LH ++ G Q F L+++YA ++ + FD++ RK++ +W +M++AY
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N AI + +L + + + + VLKAC D GR IH + + ++D
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVF 208
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVK- 194
+ +L+ MY + G + R LFD + ++ WN+M+SG G A V
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDM------PFRDMGSWNAMISGLIQNGNAAQALDVLD 262
Query: 195 ----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
G + VT+ S++ + + G+I + + +I E F
Sbjct: 263 EMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY-----------VIKHGLEFELFVS 311
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT---LL 307
+AL++MY+ L +A+K+F Q +V WNS+I+ Y EQN++ +T
Sbjct: 312 NALINMYAKFGNLGDAQKVFQQM------FLRDVVSWNSIIAAY---EQNDDPVTARGFF 362
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIV-GSNLIDL 365
+ +G+ D T S ++ NSR VHG I+ G+ ++ +V G+ ++D+
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSR---SVHGFIMRRGWLMEAVVIGNAVMDM 419
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFI 424
YA+LG + SA ++F+ +P KDVV+W+ LI G T++GL S A ++R M + +NQ
Sbjct: 420 YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGT 479
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S+L + + +L++G ++H +K + T LID+Y KCG + D + LF +P
Sbjct: 480 WVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP 539
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
V W II G +G ++A+ F+EM +KP+ +TF+ +LSAC H+GLV+E
Sbjct: 540 RESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKW 599
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F M+ EYG++P L+HY CMVDLLG+AG + A I +MP PD +IW ++L AC H
Sbjct: 600 FFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIH 658
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSW 663
N +L +++L E+ YV+LSN+YA +G W+ + KVR ++ G KK G S
Sbjct: 659 GNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSS 718
Query: 664 IEVS 667
IEV+
Sbjct: 719 IEVN 722
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 225/549 (40%), Gaps = 111/549 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ C +++ G+ +HC + K G D+F +L+ MY+ F + A LF
Sbjct: 174 DFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++ SW M++ N A+ + + M G + + +++L C+ GD+
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG-INMDSVTVASILPVCAQLGDI 289
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LIH + + LE++ + N L++MY K G+L +K+F Q +V WN
Sbjct: 290 STATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM------FLRDVVSWN 343
Query: 180 SMLSGGKQ--------------------------------------------VHAFCVKR 195
S+++ +Q VH F ++R
Sbjct: 344 SIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRR 403
Query: 196 GFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G+ E V + +++DMY K G ID +FN +P +DVVSW +I G + S +
Sbjct: 404 GWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGL--ASEAI 461
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
++Y C KL N W S+++ Y +H+
Sbjct: 462 EVYRMMEE-CREIKL-------------NQGTWVSILAAY-------------AHV---- 490
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
AL+ +++HG ++ + LD VG+ LIDLY + G +
Sbjct: 491 ---------GALQQ-----------GMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVD 530
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A+ LF+++P++ V W+ +I HG A LFR+M + + S+L CS
Sbjct: 531 AMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSH 590
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTG 493
+ GK + G + ++D+ + G ++ K MP D W
Sbjct: 591 SGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGA 650
Query: 494 IIVGCGQNG 502
++ C +G
Sbjct: 651 LLGACRIHG 659
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 48/419 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C Q I +H +IK+GL ++F N L++MYA F +L DA K+
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M +++VSW +++ AY N P A R + ++ +EP+ ++ + S D
Sbjct: 331 FQQMFLRDVVSWNSIIAAYEQNDDPVTA-RGFFFKMQLNGLEPDLLTLVSLASIAAQSRD 389
Query: 121 LDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
R +H I R + V++ N ++DMY K G + K+F+ +V
Sbjct: 390 YKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI------PVKDVVS 443
Query: 178 WNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+++SG G A V R E+ T S++ Y G + G+ + +
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
+ T + + F +C L+D+Y C L +A LF Q ++ W
Sbjct: 504 IK------TNLHLDVFVGTC-----LIDLYGKCGRLVDAMCLFYQVPRESSVP------W 546
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRF--ALQV 343
N++IS + ++ E+A+ L + G+ D TF S L AC + L++ F +Q
Sbjct: 547 NAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE 606
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+G+ + + ++DL R G ++ A + +P D W L+ C HG
Sbjct: 607 YGIKPSLKHY------GCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 11/286 (3%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F S +C L A ++H L+V SG + L++LYA LG+V + F +
Sbjct: 79 FNSLFDSCTKTL-----LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRR 440
+ +KDV W+ +I ++G A F ++ + + + VLK C L
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD--- 190
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+++H + K GF+ + SLI MY + G + +LF MP RD+ SW +I G Q
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQ 250
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG A +A+ EM + + +T +L C G + A T+ ++GLE L
Sbjct: 251 NGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFELF 309
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++++ + G DA+++ +M F D W S++ A E +++
Sbjct: 310 VSNALINMYAKFGNLGDAQKVFQQM-FLRDVVSWNSIIAAYEQNDD 354
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 226/751 (30%), Positives = 359/751 (47%), Gaps = 99/751 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C +RS+ K++H I+K ++ D +L+++YA A + +M +++
Sbjct: 119 LRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDV 178
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT ++ + N +I L+ M G + PN F + LKACSL LDLG+ +H
Sbjct: 179 VSWTALIQGLVAEGFANDSIYLFQEMQNEG-IMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLF-------DQYSNWAASAY-------G 173
+ + L D + + L+D+Y KCG L K+F D N + Y G
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297
Query: 174 NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ SM L G+ +H+ +K G+E + L+D
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------CSCFTLSALVD----MY 257
MY KCG D + +F + + D+V W+ +I C + F L L D Y
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALIT-CLDQQGQSEESIKLFHLMRLGDTLPNQY 416
Query: 258 SNCNVLCEARKLFD-QYSS------WAASAYGNVALWNSMISGYVLNE------------ 298
+ C++L A + QY W +VA+ N++++ Y+ N
Sbjct: 417 TICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM 476
Query: 299 -------------------QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ +T+ H+ G + YTF S L +C L F+ +
Sbjct: 477 VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL--FDVHY 534
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM--GC 397
QVH I+ + + + V + LID+YA+ ++ A F+RL +D+ W+ +I
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
T G +L Y FR M N+F ++ L CS LASL G+Q+H+ K G +
Sbjct: 595 TNQGEKALNY--FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDM 652
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG +++ ALF+ + RD ++W II G QNG+ +A+ F+ M+
Sbjct: 653 FVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDE 712
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ P+ +TF G+LSAC H GLVEE F SM ++G+ P ++H CMVD+LG+ G FD+
Sbjct: 713 GISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDE 772
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
E I +M + IW ++L A + HNN L A +L PE+ S Y++LSN++AT
Sbjct: 773 LEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFAT 832
Query: 638 LGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
G WD + +VR G KK G SW+E +
Sbjct: 833 EGRWDDVKRVRSLMSSKGVKKEPGCSWVEAN 863
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/586 (24%), Positives = 248/586 (42%), Gaps = 105/586 (17%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYS 165
YS++L+ C+ L + + IH I ++ + D+ L +L+++Y KC + R + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 166 N-----WAASAYGNVA---------LWNSM------------------------LSGGKQ 187
+ W A G VA L+ M L GKQ
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW------------ 235
+HA K G + ++L+D+Y KCGEI+ +F MPE++ V+W
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 236 -----------------------TGIIVGC--------------------FECSCFTLSA 252
T ++ GC +E + F
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
LVDMYS C + +A +F ++ +W+++I+ Q+EE+I L +
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKK------PDIVVWSALITCLDQQGQSEESIKLFHLMRL 408
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ YT S L A N N ++ +H + G+E D V + L+ +Y + G V
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNL--QYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+L+ + +D+++W+ + G G+ +F M+ N + S+L C
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
SCL + G+QVHA +K + + T+LIDMY KC ++D F + RD+ +WT
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II Q + ++A+ YF++M Q +KPNE T G LS C +E + SM +
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLH-SMVFK 645
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G + +VD+ + GC ++AE L E + D W +++
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALF-EALIRRDTIAWNTII 690
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 7/312 (2%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
++S L+ C + + A +HGLIV D + +L+++YA+ A + +
Sbjct: 115 YSSMLRECASKRSLG--VAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK 172
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P +DVV+W+ LI G G + + LF++M N N+F +++ LK CS +L G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
KQ+HA K G + ++L+D+Y KCGEI+ +F MPE++ V+W ++ G Q
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G + F M++ +K NE T VL C ++ +++ I S+ + G E + E
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIH-SLIIKCGYEGN-EF 350
Query: 562 YYC-MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
C +VD+ + G DA + + KPD +W++++ C SI L+
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI-TCLDQQGQSEESIKLFHLMRL 408
Query: 621 SPEDPSKYVMLS 632
P++Y + S
Sbjct: 409 GDTLPNQYTICS 420
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 227/758 (29%), Positives = 361/758 (47%), Gaps = 99/758 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L+ LR C +RS+ K++H I+K ++ D +L+++YA A +
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+M +++VSWT ++ + N +I L+ M G + PN F + LKACSL LD
Sbjct: 172 KMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEG-IMPNEFTLATGLKACSLCMALD 230
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLF-------DQYSNWAASAY- 172
LG+ +H + + L D + + L+D+Y KCG L K+F D N + Y
Sbjct: 231 LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290
Query: 173 ------GNVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDV 202
G + L+ SM L G+ +H+ +K G+E +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------CSCFTLSALV 254
L+DMY KCG D + +F + + D+V W+ +I C + F L L
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT-CLDQQGQSEESIKLFHLMRLG 409
Query: 255 D----MYSNCNVLCEARKLFD-QYSS------WAASAYGNVALWNSMISGYVLNE----- 298
D Y+ C++L A + QY W +VA+ N++++ Y+ N
Sbjct: 410 DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDG 469
Query: 299 --------------------------QNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ +T+ H+ G + YTF S L +C L
Sbjct: 470 TKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL 529
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
F+ + QVH I+ + + + V + LID+YA+ ++ A F+RL +D+ W+
Sbjct: 530 --FDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTV 587
Query: 393 LIM--GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+I T G +L Y FR M N+F ++ L CS LASL G+Q+H+ K
Sbjct: 588 IITNYAQTNQGEKALNY--FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G + ++L+DMY KCG +++ ALF+ + RD ++W II G QNG+ +A+
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ M+ + P+ +TF G+LSAC H GLVEE F SM ++G+ P ++H CMVD+LG
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+ G FD+ E I +M + IW ++L A + HNN L A +L PE+ S Y++
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
LSN++AT G WD + +VR G KK G SW+E +
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEAN 863
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/662 (29%), Positives = 333/662 (50%), Gaps = 40/662 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ Q + ++I +G+ D+ + L + D ++ +LF+++++ ++ + ++
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N P +I LY H+ + ++ P+ F Y+ + A S D +G L+H + +
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 138 YDTVLMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---- 191
+ + + ++D+Y K L RK+FD + LWN+M+SG + F
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPER------DTVLWNTMISGFSRNSYFEDSI 199
Query: 192 -----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ G + TL +++ + E G+ + + + S G+
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGI------QCLASKKGL-----HSD 248
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ L+ L+ +YS C C+ R LFDQ +Y N+MISGY N + E A+TL
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISY------NAMISGYTFNHETESAVTL 302
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNS-RFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ +SG ++S T + L FN + + + L + G L V + L +
Sbjct: 303 FRELLASGQRVNSSTLVGLIPV---YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y RL V+ A +LF P+K + +W+ +I G T++GL A LF++M+ N +
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTV 418
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+S+L C+ L +L GK VH E T+L+DMY KCG I + LF M +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++VV+W +I G G +G KEA+ F EM+QS + P +TFL +L AC H+GLV E I
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM YG +P EHY CMVD+LG+AG +A + I MP +P +W ++L AC H
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
NT++ ++ +++L PE+ YV+LSN+Y+T + + VR+ KK K G + I
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 665 EV 666
E+
Sbjct: 659 EI 660
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 160/463 (34%), Gaps = 130/463 (28%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L + + + G + C K GL D++ L+S+Y+ LF
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D++ + +++S+ M++ YT N A+ L+ +L G N ++ L
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ-RVNSSTLVGLIPVYLPFNHL 331
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
L RLI + + + L +Y + + R+LFD+ S ++A WN
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE------SPEKSLASWN 385
Query: 180 SMLSG-------------------------------------------GKQVHAFCVKRG 196
+M+SG GK VH
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
E T+L+DMY KCG I + LF+ M +++VV+W +I G
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITG--------------- 490
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y L+ +EA+ L + SG+
Sbjct: 491 -------------------------------------YGLHGHGKEALKLFYEMLQSGIP 513
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LID 364
TF S L AC H +V+ G E+ + + +N ++D
Sbjct: 514 PTGVTFLSILYAC-------------SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVD 560
Query: 365 LYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ R G + +ALE R+P + W L+ C H +A
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 334/662 (50%), Gaps = 40/662 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ Q + ++I +G+ D+ + L + D ++ +LF+++++ ++ + ++
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N P +I LY H+ + ++ P+ F Y+ + A S D +G L+H + +
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 138 YDTVLMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---- 191
+ + + ++D+Y K L RK+FD + LWN+M+SG + F
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPER------DTVLWNTMISGFSRNSYFEDSI 199
Query: 192 -----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ G + TL +++ + E G+ + + + S G+
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGI------QCLASKKGL-----HSD 248
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ L+ L+ +YS C C+ R LFDQ ++ +N+MISGY N + E A+TL
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQ------PDLISYNAMISGYTFNHETESAVTL 302
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNS-RFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ +SG ++S T + L FN + + + L + G L V + L +
Sbjct: 303 FRELLASGQRVNSSTLVGLIPV---YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y RL V+ A +LF P+K + +W+ +I G T++GL A LF++M+ N +
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTV 418
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+S+L C+ L +L GK VH E T+L+DMY KCG I + LF M +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++VV+W +I G G +G KEA+ F EM+QS + P +TFL +L AC H+GLV E I
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM YG +P EHY CMVD+LG+AG +A + I MP +P +W ++L AC H
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
NT++ ++ +++L PE+ YV+LSN+Y+T + + VR+ KK K G + I
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 665 EV 666
E+
Sbjct: 659 EI 660
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 160/463 (34%), Gaps = 130/463 (28%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L + + + G + C K GL D++ L+S+Y+ LF
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D++ + +++S+ M++ YT N A+ L+ +L G N ++ L
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ-RVNSSTLVGLIPVYLPFNHL 331
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
L RLI + + + L +Y + + R+LFD+ S ++A WN
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE------SPEKSLASWN 385
Query: 180 SMLSG-------------------------------------------GKQVHAFCVKRG 196
+M+SG GK VH
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
E T+L+DMY KCG I + LF+ M +++VV+W +I G
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITG--------------- 490
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y L+ +EA+ L + SG+
Sbjct: 491 -------------------------------------YGLHGHGKEALKLFYEMLQSGIP 513
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LID 364
TF S L AC H +V+ G E+ + + +N ++D
Sbjct: 514 PTGVTFLSILYAC-------------SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVD 560
Query: 365 LYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ R G + +ALE R+P + W L+ C H +A
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 222/780 (28%), Positives = 350/780 (44%), Gaps = 136/780 (17%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
R ++ G++ H R++ G F N LL MYA AH +FD M ++ VSW TM
Sbjct: 32 RSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTM 91
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM---------------------------- 107
+TAY + A L+ M + V N +
Sbjct: 92 LTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDR 151
Query: 108 --YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--------- 156
+ +LK+C DL LG IH + LE D + L+DMY KC SL
Sbjct: 152 TTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHG 211
Query: 157 ----------------------TR--KLFDQYSNWA--------ASAYGNVALWNSMLSG 184
TR +LF Q ASA+ + A LS
Sbjct: 212 MGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM-PCLST 270
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG------------------------ 220
+Q+HA +K F + V T+++D+Y K G + D
Sbjct: 271 ARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330
Query: 221 -------LALFNFMPER----DVVSWTGIIVGC--------------------FECSCFT 249
+ LF FM DV+S +G+ C F+
Sbjct: 331 TGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCV 390
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+A++D+Y C L EA +F + + + WN++I+ NE E+ I L+
Sbjct: 391 RNAILDLYGKCKALVEAYLVFQEMEQRDSVS------WNAIIAALEQNECYEDTIAHLNE 444
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ SGM D +T+ S LKAC L + + L VHG + SG LD V S ++D+Y +
Sbjct: 445 MLRSGMEPDDFTYGSVLKACAGLQSLE--YGLVVHGKAIKSGLGLDAFVSSTVVDMYCKC 502
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A +L R+ +++V+W+ +I G + + A F +M++ + F ++VL
Sbjct: 503 GAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVL 562
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ LA++ GKQ+H +K+ ++ ++L+DMY KCG + D L +F+ + D V
Sbjct: 563 DTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFV 622
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G +G+ EA+ F+ M ++ + PN TF+ VL AC H GL+++ F M
Sbjct: 623 SWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLM 682
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
Y L P LEH+ CMVD+LG++ +A + I MP + D +W ++L C+ + ++
Sbjct: 683 TSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEV 742
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
A +L P+D S Y++LSNVYA G W +S+ R+ ++ K+ G SWIEV S
Sbjct: 743 AETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQS 802
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 151/624 (24%), Positives = 252/624 (40%), Gaps = 132/624 (21%)
Query: 108 YSAVLKACSLSGD--LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQ 163
+S + + C+ +G L G+ H R+ T + N LL MY +CG +FD
Sbjct: 20 FSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDT 79
Query: 164 Y--------------------SNWAASAYG-----NVALWNSMLSG-------------- 184
++ AAS +G +V WN+++SG
Sbjct: 80 MPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLS 139
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G Q+HA VK G E + ++L+DMY KC
Sbjct: 140 MEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKC 199
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS-----------------ALVDMY 257
+DD L F+ M ER+ VSW I GC + +T A +
Sbjct: 200 RSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAF 259
Query: 258 SNC--------------------------------NVLCEARKLFDQYSSWAASAYGNVA 285
+C +V +A L D ++ + NV
Sbjct: 260 RSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVE 319
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
N+M+ G V EA+ L + SG+ D + + AC + + LQVH
Sbjct: 320 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQ--GLQVHC 377
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL--N 403
L V SG+++D V + ++DLY + + A +F + ++D V+W+ +I ++ +
Sbjct: 378 LAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYED 437
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
++A+L +M+ S + + F SVLK C+ L SL G VH +K G + +++
Sbjct: 438 TIAHL--NEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+DMY KCG I + L + +++VSW II G +++EA +F EM+ +KP+
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDH 555
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
T+ VL C + +E I +K E + ++ +VD+ + G D+ L+
Sbjct: 556 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISS--TLVDMYAKCGNMPDS-LLM 612
Query: 583 AEMPFKPDKTIWASMLKACETHNN 606
E K D W +M+ H
Sbjct: 613 FEKARKLDFVSWNAMICGYALHGQ 636
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 220/764 (28%), Positives = 350/764 (45%), Gaps = 121/764 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR CG ++I G+ +H + + L D+ +++MY+ S +D+ +FD K+
Sbjct: 99 LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKD 158
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ + +++ Y+ N AI L+ +L + P+ F V KAC+ D++LG +H
Sbjct: 159 LFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVH 218
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ D + N L+ MY KCG + K+F+ N N+ WNS++
Sbjct: 219 ALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNR------NLVSWNSVMYACS 272
Query: 185 ---------------------------------------------GKQVHAFCVKRGFEK 199
G VH K G +
Sbjct: 273 ENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITE 332
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT---------GIIVGCFE------ 244
E SL+DMY KCG + + ALF+ ++VVSW G G FE
Sbjct: 333 EVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ 392
Query: 245 ------------------CSC-----------------------FTLSALVDMYSNCNVL 263
CS +A V Y+ C+ L
Sbjct: 393 REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSL 452
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A ++F S+ WN++I + N +++ L + SGM D +T
Sbjct: 453 DCAERVFCGMEGKTVSS------WNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIG 506
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L R ++HG ++ +G ELD +G +L+ LY + ++ +F ++
Sbjct: 507 SLLLACARLKFL--RCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKME 564
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
K +V W+ +I G +++ L A FR M++ + ++ VL CS +++LR GK+
Sbjct: 565 NKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKE 624
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
VH+F +K ++ +LIDMY KCG ++ +F + E+D W II G G +G
Sbjct: 625 VHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGH 684
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
+AI F+ M +P+ TFLGVL AC HAGLV E M+ YG++P LEHY
Sbjct: 685 GLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYA 744
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
C+VD+LG+AG +A +L+ EMP +PD IW+S+L +C + + ++ ++++LL P
Sbjct: 745 CVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPN 804
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+YA LG WD + KVR+ K+ G K AG SWIE+
Sbjct: 805 KAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEI 848
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/662 (23%), Positives = 269/662 (40%), Gaps = 129/662 (19%)
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAV---LKACSLSGDLDLGRLIHERIT-REKLEYDTV 141
N A+ L + + G+V + A+ L+AC ++ +GR +H ++ KL D V
Sbjct: 70 NDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVV 129
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
L ++ MY CGS +R +FD A+ ++ L+N++LSG
Sbjct: 130 LSTRIIAMYSACGSPSDSRGVFD------AAKEKDLFLYNALLSGYSRNALFRDAISLFL 183
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G+ VHA +K G + +LI MY KC
Sbjct: 184 ELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKC 243
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFE-------CSCFT-------------LSALV 254
G ++ + +F M R++VSW ++ C E C F ++ +V
Sbjct: 244 GFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMV 303
Query: 255 DMYSNCNVLCEAR----------------------KLFDQYSS----------WAASAYG 282
+ C + E R L D YS + +
Sbjct: 304 TVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK 363
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACI---NLLNFNSR 338
NV WN++I GY LL + + ++ T + L AC LL+
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLK-- 421
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
++HG G+ D +V + + YA+ ++ A +F + K V +W+ LI
Sbjct: 422 ---EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G + LF M++S D ++F I S+L C+ L LR GK++H F ++ G E ++
Sbjct: 479 QNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEF 538
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
SL+ +Y++C + G +F M + +V W +I G QN EA+ F++M+
Sbjct: 539 IGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGG 598
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH----YYCMVDLLGQAGC 574
+KP EI GVL AC + + + + L+ HL ++D+ + GC
Sbjct: 599 IKPQEIAVTGVLGACSQVSALRLGKEVHS-----FALKAHLSEDAFVTCALIDMYAKCGC 653
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+ ++ + + K D+ +W ++ H + L +I +L+ P + L +
Sbjct: 654 MEQSQNIFDRVNEK-DEAVWNVIIAGYGIHGHG-LKAIELFELMQNKGGRPDSFTFLGVL 711
Query: 635 YA 636
A
Sbjct: 712 IA 713
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 225/544 (41%), Gaps = 58/544 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C ++ G +H K G+++++ N+L+ MY+ L +A LF
Sbjct: 298 DVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF 357
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D KN+VSW T++ Y+ L M V N VL ACS L
Sbjct: 358 DMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQL 417
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ IH R D ++ N + Y KC SL ++F S+ WN
Sbjct: 418 LSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSS------WN 471
Query: 180 SMLSG-------GKQVHAFCV--KRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFN 225
+++ GK + F V G + + T+ SL+ +L+CG+ G L N
Sbjct: 472 ALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN 531
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ ++ + GI +L+ +Y C+ + + +FD+ + + +
Sbjct: 532 GL---ELDEFIGI-------------SLMSLYIQCSSMLLGKLIFDKMENKS------LV 569
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN MI+G+ NE EA+ + S G+ T L AC + R +VH
Sbjct: 570 CWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSAL--RLGKEVHS 627
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+ + D V LID+YA+ G ++ + +F R+ +KD W+ +I G HG
Sbjct: 628 FALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLK 687
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR-----GKQVHAFCVKRGFEKEDITL 460
A LF M N + F VL C+ + G+ + + VK E
Sbjct: 688 AIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEH----Y 743
Query: 461 TSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
++DM + G++ + L L MP E D W+ ++ C G + +++++ L
Sbjct: 744 ACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE--L 801
Query: 520 KPNE 523
+PN+
Sbjct: 802 EPNK 805
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 9/247 (3%)
Query: 397 CTKHGLNSLAYLLFRDMIN---SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
C LN LL N S+ D+++ I +L+ C ++ G++VHA
Sbjct: 64 CDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHK 123
Query: 454 EKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ D+ L T +I MY CG D +F E+D+ + ++ G +N ++AI+ F
Sbjct: 124 LRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFL 183
Query: 513 EMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
E++ + L P+ T V AC VE + G ++ + G+
Sbjct: 184 ELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVG-NALIAMYGK 242
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED--PSKYV 629
G + A ++ M + + W S++ AC + + ++LL + E P
Sbjct: 243 CGFVESAVKVFETMRNR-NLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVAT 301
Query: 630 MLSNVYA 636
M++ + A
Sbjct: 302 MVTVIPA 308
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 213/754 (28%), Positives = 364/754 (48%), Gaps = 114/754 (15%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SI +G+ +H + K GL + N L+++Y+ + DA ++FD M ++ +SW + ++
Sbjct: 213 SITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTIS 272
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y SN + A+ L++ M G+ E + +VL AC+ G +G+++H + L
Sbjct: 273 GYFSNGWHDRAVDLFSKMWSEGT-EISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLL 331
Query: 138 Y---------DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ D L + L+ MYVKCG + R++FD A + GNV +WN ++ G
Sbjct: 332 WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFD-----AMPSKGNVHVWNLIMGGYA 386
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G H + VK GF +
Sbjct: 387 KAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCA 446
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-------------------- 242
+LI Y K ID+ + +F+ MP +D +SW +I GC
Sbjct: 447 VCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQG 506
Query: 243 FECSCFTL---------------SALVDMYS-NCNVLCE---ARKLFDQYSS---WAAS- 279
E TL +V YS ++ E A L D YS+ W ++
Sbjct: 507 HELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTN 566
Query: 280 ------AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
A NV W +MI+ Y ++ LL + G+ D + TS L
Sbjct: 567 QIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAG-- 624
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ + + VHG + +G E V + L+++Y N++ A +F + KD+++W+ L
Sbjct: 625 DESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTL 684
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G +++ + ++ LF DM+ + N ++ +L + ++SL RG+++HA+ ++RGF
Sbjct: 685 IGGYSRNNFANESFSLFSDMLLQFKP-NTVTMTCILPAVASISSLERGREIHAYALRRGF 743
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
++ T +L+DMY+KCG + LF + +++++SWT +I G G +G K+A+A F++
Sbjct: 744 LEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQ 803
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M S ++P+ +F +L AC H+GL E W F +M+ EY +EP L+HY C+VDLL G
Sbjct: 804 MRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTG 863
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
+A + I MP +PD +IW S+L C H + KL +A+++ PE+ YV+L+N
Sbjct: 864 NLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLAN 923
Query: 634 VYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEV 666
+YA W+++ K++ K G + + G SWIEV
Sbjct: 924 IYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEV 957
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 175/748 (23%), Positives = 304/748 (40%), Gaps = 167/748 (22%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT--GNNLLSMYADFTSLNDAHKL 60
+R ++ CG+ RS++ + H +++ G I + G L+ Y L A +
Sbjct: 94 VRSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMV 152
Query: 61 FDEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
FDEM + ++ WT++++AY + L+ M G V P+ S VLK +
Sbjct: 153 FDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG-VSPDAHAVSCVLKCIASL 211
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
G + G +IH + + L + N L+ +Y +CG + ++FD A +
Sbjct: 212 GSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAIS----- 266
Query: 177 LWNSMLSG--------------------------------------------GKQVHAFC 192
WNS +SG GK VH +
Sbjct: 267 -WNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYS 325
Query: 193 VKRGFEKEDVTLTSLID---------MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-- 241
+K G + ++ S ID MY+KCG++ +F+ MP + V +I+G
Sbjct: 326 MKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGY 385
Query: 242 ------------------------------------CFECS------------------C 247
C C+ C
Sbjct: 386 AKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQC 445
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+AL+ Y+ N++ A +FD+ + + WNS+ISG N N EAI L
Sbjct: 446 AVCNALISFYAKSNMIDNAVLVFDRMP------HQDTISWNSVISGCTSNGLNSEAIELF 499
Query: 308 SHIHSSGMCIDSYTFTSALKACI-NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ G +DS T S L AC + F R VHG V +G + + + L+D+Y
Sbjct: 500 VRMWMQGHELDSTTLLSVLPACARSHYWFVGRV---VHGYSVKTGLIGETSLANALLDMY 556
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ + S ++F + +K+VV+W+ +I T+ GL L ++M+ + F ++
Sbjct: 557 SNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
SVL + SL++GK VH + ++ G EK +L++MY+ C +++ +F + +
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----------H 535
D++SW +I G +N A E+ + F +M+ + KPN +T +L A H
Sbjct: 677 DIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERGREIH 735
Query: 536 A-----GLVEEAWT--IFTSMKPEYG------------LEPHLEHYYCMVDLLGQAGCFD 576
A G +E+++T M + G + +L + M+ G GC
Sbjct: 736 AYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGK 795
Query: 577 DAEQLIAEM---PFKPDKTIWASMLKAC 601
DA L +M +PD ++++L AC
Sbjct: 796 DAVALFEQMRGSGVEPDTASFSAILYAC 823
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 183/452 (40%), Gaps = 118/452 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C + G+ +H +K GL + N LL MY++ + + +++
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F MA+KN+VSWT M+T+YT + L M+ G ++P+ F ++VL +
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG-IKPDVFAVTSVLHGFAGDES 627
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L G+ +H R +E + N L++MYV C ++ R +FD +N ++ W
Sbjct: 628 LKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTN------KDIISW 681
Query: 179 NSMLSG-------------------------------------------GKQVHAFCVKR 195
N+++ G G+++HA+ ++R
Sbjct: 682 NTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRR 741
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
GF ++ T +L+DMY+KCG + LF+ + +++++SWT +I G
Sbjct: 742 GFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG-------------- 787
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y ++ ++A+ L + SG+
Sbjct: 788 --------------------------------------YGMHGCGKDAVALFEQMRGSGV 809
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARL 369
D+ +F++ L AC + L G + +Y + L +DL +
Sbjct: 810 EPDTASFSAILYACCH-------SGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHT 862
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
GN+K A E +P + D W L+ GC H
Sbjct: 863 GNLKEAFEFIESMPIEPDSSIWVSLLHGCRIH 894
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 28/367 (7%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
LV Y C L AR +FD+ A +V +W S++S Y +E ++L +
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVA----DVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D++ + LK CI L + + +HGL+ G V + LI LY+R G +
Sbjct: 192 CGVSPDAHAVSCVLK-CIASLGSITEGEV-IHGLLEKLGLGEACAVANALIALYSRCGCM 249
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A+++F + +D ++W+ I G +G + A LF M + +++ + SVL C
Sbjct: 250 EDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPAC 309
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLID---------MYLKCGEIDDGLALFKFM 483
+ L GK VH + +K G + ++ S ID MY+KCG++ +F M
Sbjct: 310 AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAM 369
Query: 484 PER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS-----ACRHAG 537
P + +V W I+ G + +E++ F++M + + P+E +L +C G
Sbjct: 370 PSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDG 429
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV + + + + L +Y +++ D+A + MP + D W S+
Sbjct: 430 LVAHGYLVKLGFGTQCAVCNALISFYAKSNMI------DNAVLVFDRMPHQ-DTISWNSV 482
Query: 598 LKACETH 604
+ C ++
Sbjct: 483 ISGCTSN 489
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 212/665 (31%), Positives = 333/665 (50%), Gaps = 51/665 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+++H + K G D F GNNL+++Y F L DA +FDEM +N ++WTT++ +
Sbjct: 97 GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQ 156
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
R+ M G E N S +L+AC +L G IH + + + D
Sbjct: 157 VNDVESVFRIAREMYWVGE-EFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVF 215
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAFC 192
+ +L+ MY +CG L K+ YSN A Y +V N M+S G K + F
Sbjct: 216 VGTSLISMYSRCGDLGAAEKV---YSNLA---YKDVRCLNFMISEYGKAGCGEKAIGVFL 269
Query: 193 --VKRGFEKEDVTLTSLIDMYLKC-GEIDDGLALFNFMPERDVVSWTGIIVG-CFECSC- 247
+ G E D T T++I C G+ID V ++ G C +C C
Sbjct: 270 HLLGSGLEPNDYTFTNVIS---ACNGDID--------------VEVLRVLHGMCIKCGCG 312
Query: 248 ---FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+A+V +Y +L EA K S+ N+ W +++SGYV N ++A+
Sbjct: 313 DEISVGNAIVSVYVKHGMLEEAEK------SFCGMGERNLVSWTALLSGYVKNGNGKKAL 366
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
S I G+ DS F + L C N LQ+HG +V GY D VG+ LID
Sbjct: 367 EGFSQILELGVGFDSCCFATLLDGCSECKNLG--LGLQIHGFVVKLGYVHDVSVGTALID 424
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LYA+ ++SA +FH L K++V+++ ++ G A LF + ++ +
Sbjct: 425 LYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVT 483
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ +L + + A L +GK +HA+ +K GFE ++I MY KCG I D LF M
Sbjct: 484 FARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMN 543
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D +SW +I +G+ ++A+ F+EM + P+EIT L VL AC ++GL+EE +
Sbjct: 544 YLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFC 603
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+F M+ +YG++P +EH+ CMVDLLG+AG +A I PF +W +++ C+ H
Sbjct: 604 LFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLH 663
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
+ I ++ LL +PE+ Y+++SN+YA GM + ++VR L K+AG SW
Sbjct: 664 GDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSW 723
Query: 664 IEVSS 668
IE+ +
Sbjct: 724 IEIDN 728
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 49/276 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ +G+ +H +IK G +D+F G +L+SMY+ L A K++ +A K++
Sbjct: 186 LQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDV 245
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
M++ Y AI ++ H+L G +EPN + ++ V+ AC+ D+++ R++H
Sbjct: 246 RCLNFMISEYGKAGCGEKAIGVFLHLLGSG-LEPNDYTFTNVISACNGDIDVEVLRVLHG 304
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + + N ++ +YVK G L + ++ N+ W ++LSG
Sbjct: 305 MCIKCGCGDEISVGNAIVSVYVKHGMLE----EAEKSFCGMGERNLVSWTALLSGYVKNG 360
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G Q+H F VK G+ + T
Sbjct: 361 NGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGT 420
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+LID+Y KC ++ +F+ + ++++VS+ I+ G
Sbjct: 421 ALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSG 456
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 415 NSNQDVNQFII--SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
NS+ D N +L++ L G+ +HAF K G++ + +L+++Y K +
Sbjct: 69 NSDSDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNK 128
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ D ++F M R+ ++WT +I G Q + +EM + NE T +L A
Sbjct: 129 LGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQA 188
Query: 533 C 533
C
Sbjct: 189 C 189
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 344/699 (49%), Gaps = 62/699 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ C G +H +++ G D+ + LL MYA ++ ++F
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ KN VSW+ ++ N + A++ + M + + +Y++VL++C+ +L
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSEL 255
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG +H + D ++ LDMY KC ++ + LFD+ N +Y N
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY------N 309
Query: 180 SMLSG-GKQVHAF--------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++G ++ H F + G ++++L+ + + +GL +++
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDL---- 365
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I +A +DMY C L EA ++FD+ A + WN++
Sbjct: 366 -------AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS------WNAI 412
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+ + N + E + L + S + D +TF S LKAC + + +++H IV S
Sbjct: 413 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG---GSLGYGMEIHSSIVKS 469
Query: 351 GYELDYIVGSNLIDLYARLG----------------NVKSALELFHRLPKKDV----VAW 390
G + VG +LID+Y++ G NV +E ++ K + V+W
Sbjct: 470 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSW 529
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + A +LF M+ ++F ++VL C+ LAS GKQ+HA +K
Sbjct: 530 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 589
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ + + ++L+DMY KCG++ D +F+ RD V+W +I G +G+ +EAI
Sbjct: 590 KELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 649
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ MI +KPN +TF+ +L AC H GL+++ F MK +YGL+P L HY MVD+LG
Sbjct: 650 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 709
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYV 629
++G A +LI EMPF+ D IW ++L C H NN ++ LL P+D S Y
Sbjct: 710 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 769
Query: 630 MLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
+LSNVYA GMW+ +S +R+ G KL +K+ G SW+E+
Sbjct: 770 LLSNVYADAGMWEKVSDLRRNMRGFKL-KKEPGCSWVEL 807
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 204/421 (48%), Gaps = 27/421 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ HA + GF L L+ +Y + +F+ MP RDVVSW +I G
Sbjct: 25 GKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMING--- 81
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y+ N + +A F+ +V WNSM+SGY+ N + ++I
Sbjct: 82 ------------YAKSNNMVKASFFFNMM------PVRDVVSWNSMLSGYLQNGETLKSI 123
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + +G D TF LK C L ++ +Q+HG++V G + D + S L+D
Sbjct: 124 EVFVDMGRAGTEFDGRTFAIILKVCSCLE--DTSLGMQIHGVVVRVGCDTDVVAASALLD 181
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ +L +F +P+K+ V+WS +I GC ++ L SLA F++M N V+Q I
Sbjct: 182 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 241
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+SVL+ C+ L+ LR G Q+HA +K F + I T+ +DMY KC + D LF
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSE 301
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+ S+ +I G Q +A+ F ++ S L +EI+ GV AC + E
Sbjct: 302 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361
Query: 545 IFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
I+ ++K L+ + + +D+ G+ +A ++ EM + D W +++ A E
Sbjct: 362 IYDLAIKSSLSLDVCVAN--AAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQ 418
Query: 604 H 604
+
Sbjct: 419 N 419
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ +L GKQ HA + GF L L+ +Y + +F MP RDVVSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 492 TGIIVGCGQNGRAKEAIAYFQEM 514
+I G ++ +A +F M
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMM 98
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C K G L MI S F+++ +L+V + V R ++
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMV----FDRMPLRD 71
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++ +I+ Y K + F MP RDVVSW ++ G QNG ++I F +M +
Sbjct: 72 VVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGR 131
Query: 517 SRLKPNEITFLGVLSAC 533
+ + + TF +L C
Sbjct: 132 AGTEFDGRTFAIILKVC 148
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 212/672 (31%), Positives = 336/672 (50%), Gaps = 42/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG ++ +H G D+F G+ L+ +YAD + DA ++FDE+ +++
Sbjct: 152 IKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDT 211
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W M+ Y + N A+ + M S+ N Y+ +L C+ G LG +H
Sbjct: 212 ILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV-NSVTYTCILSICATRGKFCLGTQVHG 270
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ E+D + NTL+ MY KCG+L RKLF+ + WN +++G
Sbjct: 271 LVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQ------TDTVTWNGLIAG--- 321
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
V+ GF E L + + G D + +F+P + +G + C E
Sbjct: 322 ----YVQNGFTDE---AAPLFNAMISAGVKPDSVTFASFLPS---ILESGSLRHCKEVHS 371
Query: 248 FTL-----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + SAL+D+Y + ARK+F Q + +VA+ +MISGYVL
Sbjct: 372 YIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ------NTLVDVAVCTAMISGYVL 425
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ N +AI + GM +S T S L A + ++H I+ E
Sbjct: 426 HGLNIDAINTFRWLIQEGMVPNSLTMASVLPA--CAALAALKLGKELHCDILKKQLENIV 483
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VGS + D+YA+ G + A E F R+ + D + W+ +I +++G +A LFR M S
Sbjct: 484 NVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMS 543
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ +SS L + L +L GK++H + ++ F + ++LIDMY KCG++
Sbjct: 544 GAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALA 603
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F M ++ VSW II G +G A+E + F EM+++ + P+ +TFL ++SAC HA
Sbjct: 604 RCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHA 663
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E F M EYG+ +EHY CMVDL G+AG +A I MPF PD +W +
Sbjct: 664 GLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGT 723
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L AC H N +L + + LL P++ YV+LSNV+A G W S+ KVR+ K+ G
Sbjct: 724 LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783
Query: 656 EKKAGMSWIEVS 667
+K G SWI+V+
Sbjct: 784 QKIPGYSWIDVN 795
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 227/551 (41%), Gaps = 95/551 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C ++Q + +H +II G+S + +L +Y ++D LF + N
Sbjct: 51 FRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNA 110
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH- 128
+ W M+ ++A+ Y ML +V P+ + + V+KAC ++ L ++H
Sbjct: 111 LPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169
Query: 129 ------------------------------ERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
R+ E + DT+L N +L YVK G
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNN 229
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLID 209
+ + + N + +LS G QVH + GFE + +L+
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + D LFN MP+ D V+W G+I G
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAG---------------------------- 321
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
YV N +EA L + + S+G+ DS TF S L +
Sbjct: 322 ------------------------YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI 357
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + + R +VH IV D + S LID+Y + G+V+ A ++F + DV
Sbjct: 358 LE--SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAV 415
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ +I G HGLN A FR +I N ++SVL C+ LA+L+ GK++H +
Sbjct: 416 CTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDIL 475
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K+ E +++ DMY KCG +D F+ M E D + W +I QNG+ + A+
Sbjct: 476 KKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVD 535
Query: 510 YFQEMIQSRLK 520
F++M S K
Sbjct: 536 LFRQMGMSGAK 546
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 233/518 (44%), Gaps = 36/518 (6%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAA 169
++ +ACS + + R +H +I + L + +L +YV CG ++ D + +
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRIS----DGGNLFFG 104
Query: 170 SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL------KCGEIDDGLAL 223
N WN M+ G + F F + + D Y CG +++
Sbjct: 105 LELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNN---- 160
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+P VV T +G F F SAL+ +Y++ +C+AR++FD+ +
Sbjct: 161 ---VPLCMVVHNTARSLG-FHVDLFVGSALIKLYADNGYICDARRVFDELPQR------D 210
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
LWN M+ GYV + A+ + +S ++S T+T L C F QV
Sbjct: 211 TILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFC--LGTQV 268
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HGL++ SG+E D V + L+ +Y++ GN+ A +LF+ +P+ D V W+GLI G ++G
Sbjct: 269 HGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFT 328
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A LF MI++ + +S L SLR K+VH++ V+ + ++L
Sbjct: 329 DEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSAL 388
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
ID+Y K G+++ +F+ DV T +I G +G +AI F+ +IQ + PN
Sbjct: 389 IDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNS 448
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY----CMVDLLGQAGCFDDAE 579
+T VL AC ++ + + L+ LE+ + D+ + G D A
Sbjct: 449 LTMASVLPACAALAALKLGKELHCDI-----LKKQLENIVNVGSAITDMYAKCGRLDLAY 503
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+ M + D W SM+ + + ++ + Q+
Sbjct: 504 EFFRRMS-ETDSICWNSMISSFSQNGKPEMAVDLFRQM 540
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
QD + S+ + CS + +++ +QVH + G + ++ +Y+ CG I DG
Sbjct: 40 QDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGG 99
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
LF + + + W +I G G A+ ++ +M+ S + P++ TF V+ AC
Sbjct: 100 NLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLN 159
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
V + + + G L ++ L G DA ++ E+P + D +W M
Sbjct: 160 NVPLCMVVHNTAR-SLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-QRDTILWNVM 217
Query: 598 LKA 600
L
Sbjct: 218 LHG 220
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 209/669 (31%), Positives = 346/669 (51%), Gaps = 111/669 (16%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKL 160
P+ YS +LK+C + LG+L+H ++ + LE D+V++NTL+ +Y KCG R +
Sbjct: 24 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83
Query: 161 FDQYSN------WAA--SAYGN-----VALWN--SMLS---------------------- 183
F+ N W+A S + N A+W ML
Sbjct: 84 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143
Query: 184 --GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLK-CGEIDDGLALFNFMPERDVVSWTGII 239
G+ ++ F VK G+ + DV + LIDM++K G++ +F+ MPER++V+WT +I
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 203
Query: 240 VGCFECSC--------------------FTLSA--------------------------- 252
+ C FT S+
Sbjct: 204 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 263
Query: 253 --------LVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN-EQN 300
LVDMY+ C + ++RK+F+Q NV W ++I+ YV + E +
Sbjct: 264 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE------HNVMSWTAIITAYVQSGECD 317
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EAI L + S + + ++F+S LKAC NL + + QV+ V G VG+
Sbjct: 318 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYAVKLGIASVNCVGN 375
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+LI +YAR G ++ A + F L +K++V+++ ++ G K+ + A+LLF ++ ++ +
Sbjct: 376 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 435
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ F +S+L + + ++ +G+Q+H +K G++ +LI MY +CG I+ +F
Sbjct: 436 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 495
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M +R+V+SWT +I G ++G A A+ F +M+++ KPNEIT++ VLSAC H G++
Sbjct: 496 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 555
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F SM E+G+ P +EHY CMVDLLG++G +A + I MP D +W ++L A
Sbjct: 556 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKA 659
C H NT+L AE +L P+DP+ Y++LSN++A+ G W + K+RK+ K+ K+A
Sbjct: 616 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 675
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 676 GCSWIEVEN 684
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M N + S +LK C + + GK VH ++ G E + + L +LI +Y KCG+
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 473 IDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ +F+ M +RD+VSW+ ++ N +AI F +M++ PNE F V+
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 532 ACRHA-------------------------------------GLVEEAWTIFTSMKPEYG 554
AC +A G + A+ +F M
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP---- 192
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKAC 601
E +L + M+ Q GC DA L +M + PD+ ++S+L AC
Sbjct: 193 -ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 223/779 (28%), Positives = 348/779 (44%), Gaps = 134/779 (17%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
R ++ G++ H R++ G F N LL MYA A +FD M ++ VSW TM
Sbjct: 17 RSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTM 76
Query: 76 VTAYTSNKRPNWAIRLYNHM------------------------------LEYGSVEPNG 105
+TAY A L+ M + V P+
Sbjct: 77 LTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDR 136
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS 165
+ +LKAC DL LG IH + LE D + L+DMY KC SL L +
Sbjct: 137 TTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHG 196
Query: 166 -------NWAASAYGNVA---------LWNSM------------------------LSGG 185
+W A+ G V L+ M LS
Sbjct: 197 MGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTA 256
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD-------------------------- 219
+Q+HA +K F + V T+++D+Y K + D
Sbjct: 257 RQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRT 316
Query: 220 -----GLALFNFMPER----DVVSWTGIIVGCFECS---------CFTL----------- 250
L LF FM DVVS +G+ C E C +
Sbjct: 317 GLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVR 376
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+A++D+Y C L EA +F + + + WN++I+ NE E+ I L+ +
Sbjct: 377 NAILDLYGKCKALVEAYLVFQEMEQRDSVS------WNAIIAALEQNECYEDTIAYLNEM 430
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
GM D +T+ S LKAC L + + VHG + SG LD V S ++D+Y + G
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLE--YGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCG 488
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A +L R+ +++V+W+ +I G + + + A F +M++ + F ++VL
Sbjct: 489 MITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLD 548
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ LA++ GKQ+H +K+ ++ ++L+DMY KCG + D L +F+ + D VS
Sbjct: 549 TCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVS 608
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G +G+ EA+ F+ M Q+ + PN TF+ VL AC H GL+++ F M
Sbjct: 609 WNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMT 668
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
Y LEP LEH+ CMVD+LG++ +A + I MP + D IW ++L C+ + ++
Sbjct: 669 SRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVA 728
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
A +L P+D S Y++LSNVYA G W +S+ R+ ++ +K+ G SWIEV S
Sbjct: 729 ETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQS 787
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 150/588 (25%), Positives = 237/588 (40%), Gaps = 110/588 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG + G +H +K GL D+ G+ L+ MY SL DA + F M +N
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
VSW + N++ + L+ M L G +P Y++V ++C+ L R +
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQP---AYASVFRSCAAITCLSTARQL 259
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYG------------ 173
H + K D V+ ++D+Y K SL R+ F N A
Sbjct: 260 HAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLG 319
Query: 174 --NVALWNSM-----------LSG-------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M LSG G QVH +K GF+ + ++
Sbjct: 320 AEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAI 379
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-----CFE------------------ 244
+D+Y KC + + +F M +RD VSW II C+E
Sbjct: 380 LDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDD 439
Query: 245 ---------CS-----------------------CFTLSALVDMYSNCNVLCEARKLFDQ 272
C+ F S +VDMY C ++ EA+KL D+
Sbjct: 440 FTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDR 499
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ WNS+ISG+ LN+Q+EEA S + G+ D +T+ + L C NL
Sbjct: 500 IGGQ------ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+HG I+ D + S L+D+YA+ GN+ +L +F + K D V+W+
Sbjct: 554 ATIE--LGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNA 611
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKR 451
+I G HG A +F M +N N +VL+ CS + L G + + +
Sbjct: 612 MICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRY 671
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
E + ++D+ + + L + MP E D V W ++ C
Sbjct: 672 KLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSIC 719
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/669 (31%), Positives = 346/669 (51%), Gaps = 111/669 (16%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKL 160
P+ YS +LK+C + LG+L+H ++ + LE D+V++NTL+ +Y KCG R +
Sbjct: 42 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101
Query: 161 FDQYSN------WAA--SAYGN-----VALWN--SMLS---------------------- 183
F+ N W+A S + N A+W ML
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161
Query: 184 --GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLK-CGEIDDGLALFNFMPERDVVSWTGII 239
G+ ++ F VK G+ + DV + LIDM++K G++ +F+ MPER++V+WT +I
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 221
Query: 240 VGCFECSC--------------------FTLSA--------------------------- 252
+ C FT S+
Sbjct: 222 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 281
Query: 253 --------LVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN-EQN 300
LVDMY+ C + ++RK+F+Q NV W ++I+ YV + E +
Sbjct: 282 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE------HNVMSWTAIITAYVQSGECD 335
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EAI L + S + + ++F+S LKAC NL + + QV+ V G VG+
Sbjct: 336 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYAVKLGIASVNCVGN 393
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+LI +YAR G ++ A + F L +K++V+++ ++ G K+ + A+LLF ++ ++ +
Sbjct: 394 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 453
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ F +S+L + + ++ +G+Q+H +K G++ +LI MY +CG I+ +F
Sbjct: 454 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 513
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M +R+V+SWT +I G ++G A A+ F +M+++ KPNEIT++ VLSAC H G++
Sbjct: 514 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 573
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F SM E+G+ P +EHY CMVDLLG++G +A + I MP D +W ++L A
Sbjct: 574 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKA 659
C H NT+L AE +L P+DP+ Y++LSN++A+ G W + K+RK+ K+ K+A
Sbjct: 634 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 693
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 694 GCSWIEVEN 702
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M N + S +LK C + + GK VH ++ G E + + L +LI +Y KCG+
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 473 IDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ +F+ M +RD+VSW+ ++ N +AI F +M++ PNE F V+
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 532 ACRHA-------------------------------------GLVEEAWTIFTSMKPEYG 554
AC +A G + A+ +F M
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP---- 210
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKAC 601
E +L + M+ Q GC DA L +M + PD+ ++S+L AC
Sbjct: 211 -ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 259
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 332/652 (50%), Gaps = 55/652 (8%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HC IK G + I+T NN++S YA + A K+FDE ++++ VSW TM+ +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A+ M YG +G+ + ++LK + G +++G+ +H I + E + +
Sbjct: 82 ETALEFLKSMKRYG-FAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSA 140
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
LLDMY KC ++ D + + + N WN+++SG +A RG T
Sbjct: 141 LLDMYAKC----ERVEDAFEVFKSINIRNSVTWNALISG----YAHVGDRG------TAF 186
Query: 206 SLID-MYLKCGEIDDG-------LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
L+D M L+ EIDDG L + + I+ +A++ Y
Sbjct: 187 WLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S C + +A ++FD A ++ WNSM++ Y++N Q EEA L + G
Sbjct: 247 SECGSIEDAERVFD-----GAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEP 301
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY--ARLGNVKSA 375
D YT+TS + A + +L HGL++ G E + ++LI +Y + ++ A
Sbjct: 302 DIYTYTSVISAAFEXAHQGQGKSL--HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
L +F L KD V+W+ ++ G ++ GL+ A F +M + ++ + S+VL+ CS L
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDL 419
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
A+L+ G+QVH C G I+D F P+ ++W +I
Sbjct: 420 ATLQLGQQVHVLC----------------------GVIEDARKSFDATPKDSSIAWNSLI 457
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+GR K A+ F M R+K + ITF+ VL+AC H GLVEE W+ SM+ +YG+
Sbjct: 458 FGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGI 517
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P +EHY CM+DLLG+AG D+A+ LI MPF+PD +W ++L AC T + +L S +A
Sbjct: 518 PPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVAS 577
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
LL PE+ YV+LS+++ L W+ + +++ K+ G KK G SWIEV
Sbjct: 578 HLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEV 629
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 131/585 (22%), Positives = 221/585 (37%), Gaps = 138/585 (23%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ G+ +H I+K G ++F G+ LL MYA + DA ++F + +N V+W +++
Sbjct: 116 VEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISG 175
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y A L + M E VE + ++ +L L +H +I + L
Sbjct: 176 YAHVGDRGTAFWLLDCM-ELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLAS 234
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------ 184
DT + N ++ Y +CGS+ ++FD A ++ WNSML+
Sbjct: 235 DTTVCNAIITAYSECGSIEDAERVFD-----GAIETRDLVTWNSMLAAYLVNNQEEEAFE 289
Query: 185 --------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
GK +H +KRG E SLI MYL
Sbjct: 290 LFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYL 349
Query: 213 K--CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL------------VDMYS 258
K +D+ L +F + +D VSW I+ G F S + AL +D Y+
Sbjct: 350 KSHSKSMDEALNIFESLENKDHVSWNSILTG-FSQSGLSEDALKFFENMRSQYVVIDHYA 408
Query: 259 N----------------------CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
C V+ +ARK FD A+ + WNS+I GY
Sbjct: 409 FSAVLRSCSDLATLQLGQQVHVLCGVIEDARKSFD------ATPKDSSIAWNSLIFGYAQ 462
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ + + A+ L + + +D TF + L AC S L G E DY
Sbjct: 463 HGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC-------SHIGLVEEGWSFLKSMESDY 515
Query: 357 IVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA--- 406
+ +IDL R G + A L +P + D + W L+ C G LA
Sbjct: 516 GIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQV 575
Query: 407 --------------YLLFRDMI------NSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
Y+L M N + + + +K + + +VH+
Sbjct: 576 ASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHS 635
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
F ED + + ++YL+ G++ + + ++ +++S+
Sbjct: 636 ------FNAEDRSHPNCEEIYLRLGDLMEEIRRLDYVANSEIMSY 674
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S +L R H +K G T ++I Y KCGEI +F +RD VSW
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWN 69
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G G + A+ + + M + + +F +L G VE + SM +
Sbjct: 70 TMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH-SMIVK 128
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G E ++ ++D+ + +DA ++ + + T W +++
Sbjct: 129 IGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALI 173
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 274/487 (56%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G++ + TSLI MY + G ++D +F+ R VVS+T +I G
Sbjct: 84 GQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG--- 140
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + ARKLFD+ S +V WN+MISGYV +EA+
Sbjct: 141 ------------YASRGYINNARKLFDEIS------VKDVVSWNAMISGYVETCNFKEAL 182
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + Q+H I G+ + + + LID
Sbjct: 183 ELYKDMMKTNVKPDESTMVTVVSACAQ--SGSIELGRQLHSWIEDHGFGSNIKIVNVLID 240
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A LF L KKDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 241 LYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ SVL C+ L ++ G+ +H + KR G LTSLIDMY KCG+I+ +F
Sbjct: 301 MLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M R + SW +I G +G+A A F +M ++ + P++ITF+G+LSAC H+G+++
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 420
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y + P LEHY CM+DLLG G F +A+++I MP +PD IW S+LKAC+
Sbjct: 421 RHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACK 480
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GM 661
HNN +L A+ L+ PE+P YV+LSN+YAT G WD ++K+R G KKA G
Sbjct: 481 MHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGC 540
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 541 SSIEIDS 547
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 34/335 (10%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ LN + A+ L + S G+ +SY+F LK+C Q
Sbjct: 29 NLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIE--GQQ 86
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--------------------- 381
+HG ++ GY+LD V ++LI +YA+ G ++ A ++F R
Sbjct: 87 IHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGY 146
Query: 382 ----------LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ KDVV+W+ +I G + A L++DM+ +N ++ + +V+
Sbjct: 147 INNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSA 206
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+Q+H++ GF + LID+Y KCGE++ LF+ + ++DV+SW
Sbjct: 207 CAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISW 266
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L VL AC H G ++ W K
Sbjct: 267 NTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINK 326
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
G+ ++D+ + G + A+Q+ M
Sbjct: 327 RLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 193/440 (43%), Gaps = 78/440 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + +++ +G+ +H ++K G D++ +L+SMYA L DAH
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE++ K++VSW M++ Y A+ LY M++
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK- 190
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V+P+ V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG +
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF A +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 251 ACGLFQ------GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSV 304
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S L++L+DMY+ C + A+
Sbjct: 305 LPACAHLGAIDIGRWIHVYINKR--------LKGVTNASSL-LTSLIDMYAKCGDIEAAK 355
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD + + S+ WN+MI G+ ++ + A L S + +G+ D TF L
Sbjct: 356 QVFDSMLTRSLSS------WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + DY + L IDL G K A E+
Sbjct: 410 AC-------SHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRT 462
Query: 382 LP-KKDVVAWSGLIMGCTKH 400
+P + D V W L+ C H
Sbjct: 463 MPMEPDGVIWCSLLKACKMH 482
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ LH I +G +I N L+ +Y+ + A LF
Sbjct: 196 DESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLF 255
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+A+K+++SW T++ +T A+ L+ ML G PN +VL AC+ G +
Sbjct: 256 QGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSVLPACAHLGAI 314
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L+ +L+DMY KCG + +++FD + S+
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS------ 368
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G GK AF + K G + +D+T L+ G +D G +F M
Sbjct: 369 WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS 428
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
+ ++ GC ++D+ +C + EA+++ W A
Sbjct: 429 QDYKITPKLEHYGC----------MIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+ NV L S + + +N + LLS+I+++
Sbjct: 479 CKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 516
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 40/292 (13%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNS---LAYLLFRDMINSNQDVNQFIISSVLKV 431
A+ +F + + +++ W+ + G H LNS A L+ MI+ N + +LK
Sbjct: 18 AISIFETIQEPNLLIWNTMFRG---HALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ +L G+Q+H +K G++ + TSLI MY + G ++D +F R VVS+
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 492 TGIIVGCGQNG-------------------------------RAKEAIAYFQEMIQSRLK 520
T +I G G KEA+ +++M+++ +K
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+E T + V+SAC +G +E + + ++ ++G +++ ++DL + G + A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIE-DHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
L + K D W +++ TH N +++ Q + S E P+ MLS
Sbjct: 254 LFQGLA-KKDVISWNTLIGG-HTHMNLYKEALLLFQEMLRSGESPNDVTMLS 303
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 335/663 (50%), Gaps = 49/663 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKNIVSWTTMVTAYT 80
G+ +H II+ D + L+ MY+ + +A LF ++ R NIV+W M+ +
Sbjct: 161 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 220
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
N ++ LY+ + + + + ++ ACS LD GR +H + + + D
Sbjct: 221 ENGMWEKSLELYS-LAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDP 279
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAAS--------------AYGNVALWNSMLSG 184
+ +LL MY K GS+ +K+FDQ + AY + L+N M +G
Sbjct: 280 YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAG 339
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
V +F T++SL+ G D G + + +R + S I
Sbjct: 340 ETPVDSF-----------TISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAI------ 382
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
SAL+ MY C +A +F +V W SMI+G+ N + ++A+
Sbjct: 383 -----QSALLTMYYKCGSTEDADSVFYTMKE------RDVVAWGSMIAGFCQNRRFKDAL 431
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G+ DS TS + A + L N +HG + G E D V +L+D
Sbjct: 432 DLFRAMEKEGVKADSDVMTSVISAGLGLENV--ELGHLIHGFAIKRGLESDVFVACSLVD 489
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y++ G +SA +F +P K++VAW+ +I + +GL ++ L ++ ++
Sbjct: 490 MYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVS 549
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
I++VL S +A+L +GK +HA+ ++ + +LIDMY+KCG + +F+ MP
Sbjct: 550 ITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP 609
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
R++V+W +I G G +G +EA+ F+EM +S P+E+TFL ++++C H+G+VEE
Sbjct: 610 RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLN 669
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+F M+ EYG+EP +EHY +VDLLG+AG DDA I MP D+++W +L AC H
Sbjct: 670 LFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAH 729
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSW 663
N +L ++A+ LL P S YV L N+Y + MWD + +R + K G KK+ G SW
Sbjct: 730 RNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSW 789
Query: 664 IEV 666
IEV
Sbjct: 790 IEV 792
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 253/537 (47%), Gaps = 56/537 (10%)
Query: 92 YNHMLEYGSVEPNG------FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
Y+ LE S P+ F + ++LK C+ +L GR IH I L+ D + +
Sbjct: 36 YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATS 95
Query: 146 LLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
L++MYVKCG L L FD+ S SA ++ +WN
Sbjct: 96 LINMYVKCGLLGSALQVFDKMSESRDSA-PDITVWN------------------------ 130
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--------TGIIVGCFECSCFTLSALVD 255
+ID Y K G ++GLA F M E +SW II FE + +AL+
Sbjct: 131 --PVIDGYFKYGHFEEGLAQFCRMQE---LSWYMAGRQIHGYIIRNMFEGDPYLETALIG 185
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS+C+ EA LF + + + N+ WN MI G+V N E+++ L S +
Sbjct: 186 MYSSCSRPMEAWSLFGKLENRS-----NIVAWNVMIGGFVENGMWEKSLELYSLAKNENC 240
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ S +FT A AC + + F QVH ++ ++ D V ++L+ +YA+ G+V+ A
Sbjct: 241 KLVSASFTGAFTACSHGEVLD--FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA 298
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F ++ K+V + +I +G A L+ M V+ F ISS+L CS +
Sbjct: 299 KKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVV 358
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S G+ VHA +KR + ++L+ MY KCG +D ++F M ERDVV+W +I
Sbjct: 359 GSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 418
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G QN R K+A+ F+ M + +K + V+SA VE I + GL
Sbjct: 419 AGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH-GFAIKRGL 477
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
E + +VD+ + G + AE + + MP K + W SM+ +C + N +SI
Sbjct: 478 ESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK-NLVAWNSMI-SCYSWNGLPEMSI 532
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 229/504 (45%), Gaps = 41/504 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A C + G+ +HC +IK D + +LL+MYA S+ DA K+FD++ K
Sbjct: 250 AFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKE 309
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ M++A+ N R A+ LYN M + G + F S++L CS+ G D GR +H
Sbjct: 310 VELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 368
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+ + ++ + + + LL MY KCGS D S + +V W SM++G Q
Sbjct: 369 AEVIKRSMQSNVAIQSALLTMYYKCGSTE----DADSVFYTMKERDVVAWGSMIAGFCQN 424
Query: 189 HAFC----VKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
F + R EKE V +TS+I L ++ G + F +R + S +
Sbjct: 425 RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLES--DVF 482
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
V C +LVDMYS A +F + N+ WNSMIS Y N
Sbjct: 483 VAC---------SLVDMYSKFGFAESAEMVFSSMPN------KNLVAWNSMISCYSWNGL 527
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDY 356
E +I LL I G +DS + T+ L A + LL + A Q+ I + D
Sbjct: 528 PEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPS-----DL 582
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V + LID+Y + G +K A +F +P++++V W+ +I G HG A LF++M S
Sbjct: 583 QVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRS 642
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ +++ CS + G + ++ G E S++D+ + G +DD
Sbjct: 643 ETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDD 702
Query: 476 GLALFKFMP-ERDVVSWTGIIVGC 498
+ + MP + D W ++ C
Sbjct: 703 AYSFIRGMPIDADRSVWLCLLFAC 726
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 163/453 (35%), Gaps = 119/453 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L C S G+++H +IK + ++ + LL+MY S DA +
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 402
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +++V+W +M+ + N+R A+ L+ M + G + M S + L +
Sbjct: 403 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE-N 461
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALW 178
++LG LIH + LE D + +L+DMY K G +F N N+ W
Sbjct: 462 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN------KNLVAW 515
Query: 179 NSMLS--------------------------------------------GGKQVHAFCVK 194
NSM+S GK +HA+ ++
Sbjct: 516 NSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIR 575
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
+ +LIDMY+KCG + +F MP R++V+W +I G
Sbjct: 576 LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAG------------Y 623
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+ NC EEA+ L + S
Sbjct: 624 GSHGNC----------------------------------------EEAVRLFKEMKRSE 643
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYAR 368
D TF + + +C S + GL + ++Y V ++++DL R
Sbjct: 644 TAPDEVTFLALITSC-------SHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGR 696
Query: 369 LGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G + A +P D W L+ C H
Sbjct: 697 AGRLDDAYSFIRGMPIDADRSVWLCLLFACRAH 729
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 144/308 (46%), Gaps = 36/308 (11%)
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGL 346
NS I V + +A+ L S S + +TF S LK C +L N ++ R +H
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGR---TIHAS 80
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-----KDVVAWSGLIMGCTKHG 401
IVT G + D + ++LI++Y + G + SAL++F ++ + D+ W+ +I G K+G
Sbjct: 81 IVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYG 140
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
F M Q+++ ++ G+Q+H + ++ FE + T
Sbjct: 141 HFEEGLAQFCRM----QELSWYMA---------------GRQIHGYIIRNMFEGDPYLET 181
Query: 462 SLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+LI MY C + +LF + R ++V+W +I G +NG ++++ + K
Sbjct: 182 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCK 241
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYC--MVDLLGQAGCFDD 577
+F G +AC H +++ + +K + +P Y C ++ + ++G +D
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDP----YVCTSLLTMYAKSGSVED 297
Query: 578 AEQLIAEM 585
A+++ ++
Sbjct: 298 AKKVFDQV 305
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 320/626 (51%), Gaps = 34/626 (5%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
L+ A LFD++ I + ++ AY S + P A+RLY + +PN + + VLK
Sbjct: 79 LSLARHLFDQIPAPGIHDYNALIRAY-SLRGPALALRLYRSLRRRRLPQPNNYTFPFVLK 137
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
ACS DL R +H R L D + L+D+Y KC S R + A
Sbjct: 138 ACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASF-RHAATVFRRMPAR--- 193
Query: 174 NVALWNSMLSG----GKQVHAFC----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+V WN+ML+G GK ++ TL +L+ + + G + G A+
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 226 FMPERDVVS--WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+ + G++VG +AL+DMY+ C L A ++F+ A A N
Sbjct: 254 YSVRACSLHDHKDGVLVG---------TALLDMYAKCGHLVYASRVFE------AMAVRN 298
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACINLLNFNSRFALQ 342
W++++ G+VL + EA +L + + G+C S T SAL+AC NL + Q
Sbjct: 299 EVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLC--LGKQ 356
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H L+ SG D G++L+ +YA+ G + A LF ++ KD V++S L+ G ++G
Sbjct: 357 LHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGK 416
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A+ +FR M N + + S++ CS LA+L+ GK H + RG E +
Sbjct: 417 ADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNA 476
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LIDMY KCG ID +F MP RD+VSW +I G G +G KEA A F +M +P+
Sbjct: 477 LIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPD 536
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
++TF+ ++SAC H+GLV E F M +YG+ P +EHY MVDLL + G D+A Q I
Sbjct: 537 DVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFI 596
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MP K D +W ++L AC H N L ++ + PE +V+LSN+++ G +D
Sbjct: 597 QGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFD 656
Query: 643 SLSKVRKAGKKLGEKKA-GMSWIEVS 667
++VR K+ G KK+ G SWIE++
Sbjct: 657 EAAEVRIIQKEQGFKKSPGCSWIEIN 682
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 193/495 (38%), Gaps = 116/495 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ +++HC + GL D+F L+ +YA S A +F M +++
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y + + + I +L PN A+L + G L GR +H
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACL--LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 130 RITRE---KLEYDTVLMNT-LLDMYVKCGSLT--RKLFDQYS-----NWAASAYGNV--- 175
R D VL+ T LLDMY KCG L ++F+ + W+A G V
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 176 ------ALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTL 204
+L+ ML+ GKQ+HA K G +
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------------- 244
SL+ MY K G ID LF+ M +D VS++ ++ G +
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433
Query: 245 ----------CSCFTLSAL-------------------------VDMYSNCNVLCEARKL 269
+C L+AL +DMY+ C + +R++
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD + ++ WN+MI+GY ++ +EA L + D TF + AC
Sbjct: 494 FDVMPAR------DIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISAC 547
Query: 330 IN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KK 385
+ L+ R F + H +T +++ +G ++DL AR G + A + +P K
Sbjct: 548 SHSGLVTEGKRWFHMMAHKYGITP--RMEHYIG--MVDLLARGGFLDEAYQFIQGMPLKA 603
Query: 386 DVVAWSGLIMGCTKH 400
DV W L+ C H
Sbjct: 604 DVRVWGALLGACRVH 618
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ ALR C + GK LH + K GL D+ GN+LLSMYA ++ A LFD+M
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VS++ +V+ Y N + + A R++ M + +V+P+ +++ ACS L G+
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKM-QACNVQPDVATMVSLIPACSHLAALQHGK 456
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + + +T + N L+DMY KCG L+R++FD ++ WN+M++
Sbjct: 457 CGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPAR------DIVSWNTMIA 510
Query: 184 G------GKQVHAFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G GK+ A + + E +DVT LI G + +G F+ M +
Sbjct: 511 GYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHK 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C +++ GK H +I G++ + N L+ MYA ++ + ++F
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIF 494
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M ++IVSW TM+ Y + A L+ M ++ + EP+ + ++ ACS SG +
Sbjct: 495 DVMPARDIVSWNTMIAGYGIHGLGKEATALFLDM-KHQACEPDDVTFICLISACSHSGLV 553
Query: 122 DLGR 125
G+
Sbjct: 554 TEGK 557
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/663 (31%), Positives = 351/663 (52%), Gaps = 49/663 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
K LH ++ G Q IF L+++YA+ ++ + FD++ +K++ +W +M++AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + AI + +L + P+ + + VLKAC G L GR IH + +++
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVF 251
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVK- 194
+ +L+ MY + G + R LFD + ++ WN+M+SG G A V
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDM------PFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 195 ----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
G + VT+ S++ + + G+I + + + +I E F
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY-----------VIKHGLEFDLFVS 354
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT---LL 307
+AL++MY+ L +ARK F Q +V WNS+I+ Y EQN++ +T
Sbjct: 355 NALINMYAKFGNLEDARKAFQQM------FITDVVSWNSIIAAY---EQNDDPVTAHGFF 405
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLY 366
+ +G D T S A I + + + + VHG I+ G+ + D ++G+ ++D+Y
Sbjct: 406 VKMQLNGFQPDLLTLVSL--ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFII 425
A+LG + SA ++F + KDV++W+ LI G ++GL S A +++ M + + NQ
Sbjct: 464 AKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S+L + + +L++G ++H +K + T LID+Y KCG + D ++LF +P+
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
V+W II G +G A++ + F EM+ +KP+ +TF+ +LSAC H+G VEE
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M+ EYG++P L+HY CMVDLLG+AG + A I +MP +PD +IW ++L AC H
Sbjct: 644 FRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHG 702
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
N +L +++L ++ YV+LSN+YA +G W+ + KVR ++ G KK G S I
Sbjct: 703 NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Query: 665 EVS 667
EV+
Sbjct: 763 EVN 765
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 230/516 (44%), Gaps = 45/516 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ CG ++ G+ +HC K G ++F +L+ MY+ F A LF
Sbjct: 217 DFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++ SW M++ N A+ + + M G ++ N ++L C GD+
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG-IKMNFVTVVSILPVCPQLGDI 332
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LIH + + LE+D + N L++MY K G+L RK F Q +V WN
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM------FITDVVSWN 386
Query: 180 SMLSGGKQ------VHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
S+++ +Q H F VK GF+ + +TL SL + + + + ++ F+ R
Sbjct: 387 SIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRR 446
Query: 231 DVVSW--TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
W +++G +A+VDMY+ +L A K+F+ +V WN
Sbjct: 447 ---GWLMEDVVIG---------NAVVDMYAKLGLLDSAHKVFE------IILVKDVISWN 488
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSY-TFTSALKACINLLNFNSRFALQVHGLI 347
++I+GY N EAI + + I + T+ S L A ++ +++HG +
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ--GMRIHGRV 546
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + LD V + LID+Y + G + A+ LF+++P++ V W+ +I HG
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF +M++ + S+L CS + GK + G + ++D+
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLL 666
Query: 468 LKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ G ++ K MP + D W ++ C +G
Sbjct: 667 GRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHG 702
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 148/321 (46%), Gaps = 30/321 (9%)
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCID-SYTFTSALKACINLLNFNSRFALQVHGL 346
+ S Y L QNEE ID ++ F S+ K + FA +H L
Sbjct: 105 SPQFSSYGLGNQNEE--------------IDFNFLFDSSTK---------TPFAKCLHAL 141
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG-LNSL 405
+V +G + + L++LYA LG+V + F ++P+KDV W+ +I +G +
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEA 201
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
++ ++ S + + VLK C L G+++H + K GF+ SLI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIH 258
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY + G +LF MP RD+ SW +I G QNG A +A+ EM +K N +T
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+ +L C G + A I + ++GLE L ++++ + G +DA + +M
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVI-KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 586 PFKPDKTIWASMLKACETHNN 606
F D W S++ A E +++
Sbjct: 378 -FITDVVSWNSIIAAYEQNDD 397
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 119/281 (42%), Gaps = 43/281 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ +V L C Q I +H +IK+GL D+F N L++MYA F +L DA K
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M ++VSW +++ AY N P A + M + +P+ ++ + S D
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQSRD 432
Query: 121 LDLGRLIHERITREK-LEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAASAY 172
R +H I R L D V+ N ++DMY K G L K+F+ +W
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492
Query: 173 G-------------------------NVALWNSMLSG---------GKQVHAFCVKRGFE 198
G N W S+L G ++H +K
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLH 552
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ T LID+Y KCG + D ++LF +P+ V+W II
Sbjct: 553 LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 593
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 218/665 (32%), Positives = 342/665 (51%), Gaps = 43/665 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KNIVSWTTMV 76
S + GKSLH +IK G GN+++ Y + A +F+ M R ++ VSW ++
Sbjct: 62 SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N + + + G EPN V++AC + G G ++H + +
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAG-FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180
Query: 137 EYDTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
+ + N+LL MYV R+LFD+ +V W+ M+ G Q
Sbjct: 181 WAISSVQNSLLSMYVDADMECARELFDEMHE------KDVIAWSVMIGGYLQ-------- 226
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWTG------IIVGCFEC 245
+E+ V L M L G DG+ + + + RDV TG +I F+C
Sbjct: 227 -WEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVC--TGRLVHGLVIHRGFDC 283
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
F ++L+DMYS C A K+F++ S NV+ WNSM+SG+VLNE EA +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQ-----RNNVS-WNSMLSGFVLNENYSEAQS 337
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L+S + + D T + L+ C ++ F+ + +H +++ G E + +V S LID
Sbjct: 338 LISSMRKERVETDEVTLVNILQICKYFVHPFHCK---SIHCVMIRRGSEANELVLSALID 394
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
YA+ ++ A E+F R+ ++DVV+WS +I G G A ++++M N
Sbjct: 395 AYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVIT 454
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
I ++L+ CS A L+R K H +++GF E T+++DMY KCGEI F +
Sbjct: 455 IINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLA 514
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+++V+W+ +I G NG A EA+A F EM + LKPN +T L VL+AC H GLVEE +
Sbjct: 515 LKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLS 574
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPDKTIWASMLKACE 602
+F SM E GLEP EHY CMVD+LG+AG D A ++I MP K +IW S+L AC
Sbjct: 575 LFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACR 634
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK-KAGM 661
++ T+L ++L P + + Y++ S++YA G+WD +++R K+ G K AG
Sbjct: 635 SYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGY 694
Query: 662 SWIEV 666
S + +
Sbjct: 695 SLVHI 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 211/502 (42%), Gaps = 115/502 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+++A R G + G LH +IK G N+LLSMY D + A +LFDEM
Sbjct: 155 VIQACRILGTKH---DGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMH 210
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++++W+ M+ Y + P ++++ M+ +EP+G + +VLKAC+ S D+ GR
Sbjct: 211 EKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGR 270
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
L+H + + D + N+L+DMY KC K+F++ S NV+ WNSMLS
Sbjct: 271 LVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQ-----RNNVS-WNSMLS 324
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G K +H ++RG E
Sbjct: 325 GFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEA 384
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS------------- 246
++ L++LID Y KC I+ +F M RDVVSW+ +I G C
Sbjct: 385 NELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMD 444
Query: 247 ----CFTLSALVDMYSNCNVLCEARK----------------------LFDQYS------ 274
+ ++++ C+V E ++ + D YS
Sbjct: 445 RDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEIL 504
Query: 275 ----SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
++ A N+ W++MI+ Y +N EA+ L + + G+ + T S L AC
Sbjct: 505 ASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS 564
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP---K 384
+ + S F V L + G+E Y S ++D+ R G + +A+E+ +P K
Sbjct: 565 HGGLVEEGLSLFKSMVQELGLEPGFE-HY---SCMVDMLGRAGKLDTAIEVIKAMPHNLK 620
Query: 385 KDVVAWSGLIMGCTKHGLNSLA 406
W L+ C +GL L
Sbjct: 621 NGASIWGSLLSACRSYGLTELG 642
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/679 (30%), Positives = 349/679 (51%), Gaps = 40/679 (5%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R V+ L C +++ +++GK++H ++++ G ++ N+L+++YA S+ A +F+
Sbjct: 11 RSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFES 70
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWA--IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ K++VSW ++ Y+ ++ + L+ M ++ PNG +S V A S S +
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTL-PNGHTFSGVFTAASSSPET 129
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
G H + YD + ++L++MY K G + RK+FD N W
Sbjct: 130 FGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER------NTVSWA 183
Query: 180 SMLSGGKQVHAFCVKR-GFEKEDVTLTSLIDMYLKCGEIDDGL--ALFNFMPERDVVSWT 236
+++SG + ++R FE ++ M + G D + ++ + + D+V +
Sbjct: 184 TIISG------YAMERMAFEAWEL----FXLMRREEGAHDKFIYTSVLSALTVPDLVHY- 232
Query: 237 GIIVGCFECSCFTLS------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
G + C LS ALV MY C L +A K F+ S + W++M
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFE------LSGDKDDITWSAM 286
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+GY + EA+ L ++H +G +TF + AC ++ Q+HG + +
Sbjct: 287 ITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEE--GKQIHGYSLKA 344
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GYE + L+D+YA+ G++ A + F L + D+V W+ +I G ++G N A L+
Sbjct: 345 GYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLY 404
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M ++ ++SVL+ CS LA+L +GKQ+HA +K GF E ++L MY KC
Sbjct: 405 CRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKC 464
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G ++DG +F+ MP RD+++W +I G QNG +A+ F+E+ KP+ +TF+ VL
Sbjct: 465 GSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVL 524
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC H GLVE F M E+G+ P +EHY CMVD+L +AG + ++ I
Sbjct: 525 SACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHG 584
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W +L AC + N +L + E+L+ ++ S Y++LS++Y LG D + +VR+
Sbjct: 585 MCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRL 644
Query: 651 GKKLG-EKKAGMSWIEVSS 668
K G K+ G SWIE+ S
Sbjct: 645 MKLRGVNKEPGCSWIELKS 663
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 218/665 (32%), Positives = 342/665 (51%), Gaps = 43/665 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KNIVSWTTMV 76
S + GKSLH +IK G GN+++ Y + A +F+ M R ++ VSW ++
Sbjct: 62 SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N + + + G EPN V++AC + G G ++H + +
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAG-FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180
Query: 137 EYDTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
+ + N+LL MYV R+LFD+ +V W+ M+ G Q
Sbjct: 181 WAISSVQNSLLSMYVDADMECARELFDEMHE------KDVIAWSVMIGGYLQ-------- 226
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWTG------IIVGCFEC 245
+E+ V L M L G DG+ + + + RDV TG +I F+C
Sbjct: 227 -WEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVC--TGRLVHGLVIHRGFDC 283
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
F ++L+DMYS C A K+F++ S NV+ WNSM+SG+VLNE EA +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQ-----RNNVS-WNSMLSGFVLNENYSEAQS 337
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L+S + + D T + L+ C ++ F+ + +H +++ G E + +V S LID
Sbjct: 338 LISSMRKERVETDEVTLVNILQICKYFVHPFHCK---SIHCVMIRRGSEANELVLSALID 394
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
YA+ ++ A E+F R+ ++DVV+WS +I G G A ++++M N
Sbjct: 395 AYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVIT 454
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
I ++L+ CS A L+R K H +++GF E T+++DMY KCGEI F +
Sbjct: 455 IINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLA 514
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+++V+W+ +I G NG A EA+A F EM + LKPN +T L VL+AC H GLVEE +
Sbjct: 515 LKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLS 574
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPDKTIWASMLKACE 602
+F SM E GLEP EHY CMVD+LG+AG D A ++I MP K +IW S+L AC
Sbjct: 575 LFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACR 634
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK-KAGM 661
++ T+L ++L P + + Y++ S++YA G+WD +++R K+ G K AG
Sbjct: 635 SYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGY 694
Query: 662 SWIEV 666
S + +
Sbjct: 695 SLVHI 699
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 211/502 (42%), Gaps = 115/502 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+++A R G + G LH +IK G N+LLSMY D + A +LFDEM
Sbjct: 155 VIQACRILGTKH---DGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMH 210
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++++W+ M+ Y + P ++++ M+ +EP+G + +VLKAC+ S D+ GR
Sbjct: 211 EKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGR 270
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
L+H + + D + N+L+DMY KC K+F++ S NV+ WNSMLS
Sbjct: 271 LVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQ-----RNNVS-WNSMLS 324
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G K +H ++RG E
Sbjct: 325 GFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEA 384
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS------------- 246
++ L++LID Y KC I+ +F M RDVVSW+ +I G C
Sbjct: 385 NELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMD 444
Query: 247 ----CFTLSALVDMYSNCNVLCEARK----------------------LFDQYS------ 274
+ ++++ C+V E ++ + D YS
Sbjct: 445 RDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEIL 504
Query: 275 ----SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
++ A N+ W++MI+ Y +N EA+ L + + G+ + T S L AC
Sbjct: 505 ASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS 564
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP---K 384
+ + S F V L + G+E Y S ++D+ R G + +A+E+ +P K
Sbjct: 565 HGGLVEEGLSLFKSMVQELGLEPGFE-HY---SCMVDMLGRAGKLDTAIEVIKAMPDNLK 620
Query: 385 KDVVAWSGLIMGCTKHGLNSLA 406
W L+ C +GL L
Sbjct: 621 NGASIWGSLLSACRSYGLTELG 642
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 342/699 (48%), Gaps = 62/699 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ C G +H +++ G D+ + LL MYA ++ ++F
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ KN VSW+ ++ N + A++ + M + + +Y++VL++C+ +L
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSEL 255
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG +H + D ++ LDMY KC ++ + LFD N +Y N
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY------N 309
Query: 180 SMLSG-GKQVHAF--------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++G ++ H F + G ++++L+ + + +GL ++
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL---- 365
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I +A +DMY C L EA ++FD+ A + WN++
Sbjct: 366 -------AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS------WNAI 412
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+ + N + E + L + S + D +TF S LKAC + + +++H IV S
Sbjct: 413 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG---GSLGYGMEIHSSIVKS 469
Query: 351 GYELDYIVGSNLIDLYARLG----------------NVKSALELFHRLPKKDV----VAW 390
G + VG +LID+Y++ G NV +E ++ K + V+W
Sbjct: 470 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 529
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + A +LF M+ ++F ++VL C+ LAS GKQ+HA +K
Sbjct: 530 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 589
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ + + ++L+DMY KCG++ D +F+ RD V+W +I G +G+ +EAI
Sbjct: 590 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 649
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ MI +KPN +TF+ +L AC H GL+++ F MK +YGL+P L HY MVD+LG
Sbjct: 650 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 709
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYV 629
++G A +LI EMPF+ D IW ++L C H NN ++ LL P+D S Y
Sbjct: 710 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 769
Query: 630 MLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
+LSNVYA GMW+ +S +R+ G KL +K+ G SW+E+
Sbjct: 770 LLSNVYADAGMWEKVSDLRRNMRGFKL-KKEPGCSWVEL 807
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 27/421 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ HA + GF L L+ +Y + +F+ MP RDVVSW +I G
Sbjct: 25 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING--- 81
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
YS N + +A F+ +V WNSM+SGY+ N ++ ++I
Sbjct: 82 ------------YSKSNDMFKANSFFNMM------PVRDVVSWNSMLSGYLQNGESLKSI 123
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ D TF LK C L ++ +Q+HG++V G + D + S L+D
Sbjct: 124 EVFVDMGREGIEFDGRTFAIILKVCSFLE--DTSLGMQIHGIVVRVGCDTDVVAASALLD 181
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ +L +F +P+K+ V+WS +I GC ++ L SLA F++M N V+Q I
Sbjct: 182 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 241
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+SVL+ C+ L+ LR G Q+HA +K F + I T+ +DMY KC + D LF
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 301
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+ S+ +I G Q +A+ F ++ S L +EI+ GV AC + E
Sbjct: 302 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361
Query: 545 IF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
I+ ++K L+ + + +D+ G+ +A ++ EM + D W +++ A E
Sbjct: 362 IYGLAIKSSLSLDVCVAN--AAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQ 418
Query: 604 H 604
+
Sbjct: 419 N 419
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%)
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ +L GKQ HA + GF L L+ +Y + +F MP RDVVSW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 492 TGIIVGCGQNGRAKEAIAYFQEM 514
+I G ++ +A ++F M
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMM 98
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 312/628 (49%), Gaps = 43/628 (6%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A ++FD + + ++ ++ AY+ + AI LY ML + V PN + + VLKACS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRF-RVAPNKYTFPFVLKACS 111
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN 174
DL GR IH L D + L+D+Y++C R +F A +
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF------AKMPMRD 165
Query: 175 VALWNSMLSG----GKQVHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
V WN+ML+G G HA G TL SL+ + + G + G ++
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 225 NFMPERDVVSWTGIIVGCFECS---CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ + C E + +AL+DMY+ C L A ++F
Sbjct: 226 AY-----------CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFH------GMPV 268
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACINLLNFNSRFA 340
N W+++I G+VL ++ EA L + G+C S T SAL+ C +L + +
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLH--MG 326
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+H LI SG D ++L+ +YA+ G + A F + KD +++ L+ GC ++
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G A+L+F+ M N + + + S++ CS LA+L+ GK H + RG E
Sbjct: 387 GKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC 446
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
SLIDMY KCG+ID +F MP RDVVSW +I G G +G KEA F M
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFA 506
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+++TF+ +++AC H+GLV E F +M +YG+ P +EHY CMVDLL + G D+A Q
Sbjct: 507 PDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQ 566
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
I MP K D +W ++L AC H N L ++ + PE +V+LSN+++ G
Sbjct: 567 FIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626
Query: 641 WDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
+D ++VR K G KK+ G SWIE++
Sbjct: 627 FDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 188/494 (38%), Gaps = 113/494 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ G+++H GL D+F L+ +Y A +F +M +++
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y ++ + AI M ++G + PN ++L + G L G IH
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 130 RITREKLEY--DTVLMNT-LLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNV---- 175
R LE + VL+ T LLDMY KC L ++F W+A G V
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 176 -----ALWNSM-------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
L+ M L G Q+HA K G +
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------- 244
SL+ MY K G I++ F+ + +D +S+ ++ GC +
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 245 ---------CSCFTLSA-------------------------LVDMYSNCNVLCEARKLF 270
+C L+A L+DMY+ C + +R++F
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ + +V WN+MI+GY ++ +EA TL + + G D TF + AC
Sbjct: 467 DKMPAR------DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
+ + F H + E YI ++DL AR G + A + +P K D
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRME-HYIC---MVDLLARGGLLDEAYQFIQSMPLKAD 576
Query: 387 VVAWSGLIMGCTKH 400
V W L+ C H
Sbjct: 577 VRVWGALLGACRIH 590
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A ++F R+P D A++ LI + G A L+R M+ N++ VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K CS L LR G+ +HA G + T+LID+Y++C +F MP RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+W ++ G +G AIA+ +M L+PN T + +L G + + +I
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C +++ GK H +I GL+ + N+L+ MYA ++ + ++F
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++VSW TM+ Y + A L+ M G P+ + ++ ACS SG +
Sbjct: 467 DKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-FAPDDVTFICLIAACSHSGLV 525
Query: 122 DLGR-----LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA--YGN 174
G+ + H+ ++E+ ++D+ + G L D+ + S +
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYIC----MVDLLARGG-----LLDEAYQFIQSMPLKAD 576
Query: 175 VALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
V +W ++L GKQV K G E L +++ G D+
Sbjct: 577 VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRFDEA 630
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++ ++ G++ +F +P D ++ +I G AI ++ M++ R+ PN+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 524 ITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
TF VL AC + LV+ A + GL L ++DL + F A +
Sbjct: 101 YTFPFVLKAC--SALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158
Query: 583 AEMPFKPDKTIWASMLKACETH 604
A+MP + D W +ML H
Sbjct: 159 AKMPMR-DVVAWNAMLAGYANH 179
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 342/699 (48%), Gaps = 62/699 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ C G +H +++ G D+ + LL MYA ++ ++F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ KN VSW+ ++ N + A++ + M + + +Y++VL++C+ +L
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSEL 297
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG +H + D ++ LDMY KC ++ + LFD N +Y N
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY------N 351
Query: 180 SMLSG-GKQVHAF--------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++G ++ H F + G ++++L+ + + +GL ++
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA--- 408
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I +A +DMY C L EA ++FD+ A + WN++
Sbjct: 409 --------IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS------WNAI 454
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+ + N + E + L + S + D +TF S LKAC + + +++H IV S
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG---GSLGYGMEIHSSIVKS 511
Query: 351 GYELDYIVGSNLIDLYARLG----------------NVKSALELFHRLPKKDV----VAW 390
G + VG +LID+Y++ G NV +E ++ K + V+W
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + A +LF M+ ++F ++VL C+ LAS GKQ+HA +K
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ + + ++L+DMY KCG++ D +F+ RD V+W +I G +G+ +EAI
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ MI +KPN +TF+ +L AC H GL+++ F MK +YGL+P L HY MVD+LG
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYV 629
++G A +LI EMPF+ D IW ++L C H NN ++ LL P+D S Y
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 630 MLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
+LSNVYA GMW+ +S +R+ G KL +K+ G SW+E+
Sbjct: 812 LLSNVYADAGMWEKVSDLRRNMRGFKL-KKEPGCSWVEL 849
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 228/484 (47%), Gaps = 32/484 (6%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV---ALWNSM 181
RL+H +TR + ++ L + V S +Q ++ + + + V
Sbjct: 6 RLLH--MTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGA 63
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ HA + GF L L+ +Y + +F+ MP RDVVSW +I G
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
YS N + +A F+ +V WNSM+SGY+ N ++
Sbjct: 124 ---------------YSKSNDMFKANSFFNMM------PVRDVVSWNSMLSGYLQNGESL 162
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
++I + + G+ D TF LK C L ++ +Q+HG++V G + D + S
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLE--DTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ +L +F +P+K+ V+WS +I GC ++ L SLA F++M N V+
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
Q I +SVL+ C+ L+ LR G Q+HA +K F + I T+ +DMY KC + D LF
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ S+ +I G Q +A+ F ++ S L +EI+ GV AC + E
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 542 AWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I+ ++K L+ + + +D+ G+ +A ++ EM + D W +++ A
Sbjct: 401 GLQIYGLAIKSSLSLDVCVAN--AAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Query: 601 CETH 604
E +
Sbjct: 458 HEQN 461
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 166/730 (22%), Positives = 286/730 (39%), Gaps = 174/730 (23%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VS+ +T S +R + + + SV F S V K C+ G L+LG+
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNF--SFVFKECAKQGALELGKQ 69
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT-----------------RKLFDQYSN--- 166
H + T ++N LL +Y K+ + YS
Sbjct: 70 AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 167 -WAASAYGN------VALWNSMLSG----------------------------------- 184
+ A+++ N V WNSMLSG
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G Q+H V+ G + + V ++L+DMY K + L +F +PE++ VSW
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 236 TGIIVGCFEC------------------------------SCFTLSAL------------ 253
+ II GC + SC LS L
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 254 -------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+DMY+ C+ + +A+ LFD + +Y N+MI+GY E
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY------NAMITGYSQEEHG 363
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+A+ L + SSG+ D + + +AC + + LQ++GL + S LD V +
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE--GLQIYGLAIKSSLSLDVCVAN 421
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
ID+Y + + A +F + ++D V+W+ +I ++G LF M+ S +
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++F S+LK C+ SL G ++H+ VK G SLIDMY KCG I++ +
Sbjct: 482 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 481 -KFMPERDV-------------------VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+F +V VSW II G ++++A F M++ +
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 521 PNEITFLGVLSACRH---AGLVEE--AWTIFTSMKPEYGLEPHLEHYYC--MVDLLGQAG 573
P++ T+ VL C + AGL ++ A I ++ + Y C +VD+ + G
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--------YICSTLVDMYSKCG 652
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYVMLS 632
D+ +L+ E + D W +M+ H + + + +L + ++ +
Sbjct: 653 DLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISIL 711
Query: 633 NVYATLGMWD 642
A +G+ D
Sbjct: 712 RACAHMGLID 721
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 269/490 (54%), Gaps = 31/490 (6%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L G++VHA F L+DMY KCG + D LF+ M RD+ SW +IVG
Sbjct: 103 LELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVG 162
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y+ L +ARKLFD+ + WN+ ISGYV + Q
Sbjct: 163 ---------------YAKLGRLEQARKLFDEMPQRDNFS------WNAAISGYVTHNQPR 201
Query: 302 EAITLLS----HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
EA+ L H SS S FT + + R ++HG ++ + LD +
Sbjct: 202 EALELFRVMQRHERSS-----SNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEV 256
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V S L+DLY + G++ A +F ++ +DVV+W+ +I C + G +LLFRD++ S
Sbjct: 257 VWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSG 316
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N++ + VL C+ A+ GK+VH + + G++ +++L+ MY KCG
Sbjct: 317 VRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVAR 376
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M + D+VSWT +IVG QNG+ EA+ +F+ ++QS KP+++T++GVLSAC HAG
Sbjct: 377 RVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAG 436
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV++ F S+K ++GL +HY C++DLL ++G F +AE +I MP KPDK +WAS+
Sbjct: 437 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASL 496
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L C H N +L A+ L PE+P+ Y+ L+N+YA G+W ++ VRK +G
Sbjct: 497 LGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIV 556
Query: 657 KKAGMSWIEV 666
KK G SWIE+
Sbjct: 557 KKPGKSWIEI 566
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 181/473 (38%), Gaps = 139/473 (29%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + R+++ G+ +H +F N LL MYA SL DA LFDEM +++ SW
Sbjct: 97 CVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSW 156
Query: 73 TTMV-------------------------------TAYTSNKRPNWAIRLYNHMLEYGSV 101
TM+ + Y ++ +P A+ L+ M +
Sbjct: 157 NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERS 216
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
N F S+ L A + L LG+ IH + R +L D V+ + LLD+Y KCGSL R
Sbjct: 217 SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG 276
Query: 160 LFDQYSN-----WAASAY----------GNVALWNSMLSG-------------------- 184
+FDQ + W + G + + M SG
Sbjct: 277 IFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GK+VH + + G++ +++L+ MY KCG +FN M + D+VSWT +IVG
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVG 396
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y N Q +
Sbjct: 397 ----------------------------------------------------YAQNGQPD 404
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLNFNSRFALQVHGLIVTSGYEL 354
EA+ + SG D T+ L AC + L F+S + HGL+ T+ +
Sbjct: 405 EALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHS--IKEKHGLMHTADHY- 461
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ +IDL AR G K A + +P K D W+ L+ GC HG LA
Sbjct: 462 -----ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 49/335 (14%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EA+ LL H + + +++ + AC+ +VH S + + +
Sbjct: 72 KEAVELL---HRTDHRPSARVYSTLIAACVRHRALE--LGRRVHAHTKASNFVPGVFISN 126
Query: 361 NLIDLYA-------------------------------RLGNVKSALELFHRLPKKDVVA 389
L+D+YA +LG ++ A +LF +P++D +
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ I G H A LFR M + N+F +SS L + + LR GK++H +
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
++ +++ ++L+D+Y KCG +D+ +F M +RDVVSWT +I C ++GR +E
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 509 AYFQEMIQSRLKPNEITFLGVLSAC-----RHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
F++++QS ++PNE TF GVL+AC H G + + G +P
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA------GYDPGSFAIS 360
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+V + + G A ++ EM +PD W S++
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + GK +H ++ G F + L+ MY+ + A ++F+EM + ++
Sbjct: 328 LNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDL 387
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSWT+++ Y N +P+ A+ + +L+ G+ +P+ Y VL AC+ +G +D G
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGT-KPDQVTYVGVLSACTHAGLVDKG 441
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 312/628 (49%), Gaps = 43/628 (6%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A ++FD + + ++ ++ AY+ + AI LY ML + V PN + + VLKACS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRF-RVAPNKYTFPFVLKACS 111
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN 174
DL GR IH L D + L+D+Y++C R +F A +
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF------AKMPMRD 165
Query: 175 VALWNSMLSG----GKQVHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
V WN+ML+G G HA G TL SL+ + + G + G ++
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 225 NFMPERDVVSWTGIIVGCFECS---CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ + C E + +AL+DMY+ C L A ++F
Sbjct: 226 AY-----------CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFH------GMPV 268
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACINLLNFNSRFA 340
N W+++I G+VL ++ EA L + G+C S T SAL+ C +L + +
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLH--MG 326
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+H LI SG D ++L+ +YA+ G + A F + KD +++ L+ GC ++
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G A+L+F+ M N + + + S++ CS LA+L+ GK H + RG E
Sbjct: 387 GKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC 446
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
SLIDMY KCG+ID +F MP RDVVSW +I G G +G KEA F M
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFA 506
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+++TF+ +++AC H+GLV E F +M +YG+ P +EHY CMVDLL + G D+A Q
Sbjct: 507 PDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQ 566
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
I MP K D +W ++L AC H N L ++ + PE +V+LSN+++ G
Sbjct: 567 FIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626
Query: 641 WDSLSKVRKAGKKLGEKKA-GMSWIEVS 667
+D ++VR K G KK+ G SWIE++
Sbjct: 627 FDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 188/494 (38%), Gaps = 113/494 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ G+++H GL D+F L+ +Y A +F +M +++
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y ++ + AI M ++G + PN ++L + G L G IH
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 130 RITREKLEY--DTVLMNT-LLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNV---- 175
R LE + VL+ T LLDMY KC L ++F W+A G V
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 176 -----ALWNSM-------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
L+ M L G Q+HA K G +
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------- 244
SL+ MY K G I++ F+ + +D +S+ ++ GC +
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 245 ---------CSCFTLSA-------------------------LVDMYSNCNVLCEARKLF 270
+C L+A L+DMY+ C + +R++F
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ + +V WN+MI+GY ++ +EA TL + + G D TF + AC
Sbjct: 467 DKMPAR------DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
+ + F H + E YI ++DL AR G + A + +P K D
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRME-HYIC---MVDLLARGGLLDEAYQFIQSMPLKAD 576
Query: 387 VVAWSGLIMGCTKH 400
V W L+ C H
Sbjct: 577 VRVWGALLGACRIH 590
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A ++F R+P D A++ LI + G A L+R M+ N++ VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K CS L LR G+ +HA G + T+LID+Y++C +F MP RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+W ++ G +G AIA+ +M L+PN T + +L G + + +I
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C +++ GK H +I GL+ + N+L+ MYA ++ + ++F
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M +++VSW TM+ Y + A L+ M G P+ + ++ ACS SG +
Sbjct: 467 DKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-FAPDDVTFICLIAACSHSGLV 525
Query: 122 DLGR-----LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA--YGN 174
G+ + H+ ++E+ ++D+ + G L D+ + S +
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYIC----MVDLLARGG-----LLDEAYQFIQSMPLKAD 576
Query: 175 VALWNSMLSG---------GKQVHAFCVKRGFE 198
V +W ++L GKQV K G E
Sbjct: 577 VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPE 609
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++ ++ G++ +F +P D ++ +I G AI ++ M++ R+ PN+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 524 ITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
TF VL AC + LV+ A + GL L ++DL + F A +
Sbjct: 101 YTFPFVLKAC--SALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158
Query: 583 AEMPFKPDKTIWASMLKACETH 604
A+MP + D W +ML H
Sbjct: 159 AKMPMR-DVVAWNAMLAGYANH 179
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 221/746 (29%), Positives = 351/746 (47%), Gaps = 130/746 (17%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK--NIVSWTTMVTAYTSNKRP 85
R I Y +S F N +L + + AH LFD++ + + ++ +Y+ +K+
Sbjct: 22 RFIHYSISLK-FISNTVLCV------PHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQT 74
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A+ L+ +L + S++P+ S V C+ S D LGR +H + + L + +
Sbjct: 75 KEALNLFVSLL-HSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTS 133
Query: 146 LLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG------------------- 184
L+DMY+K ++ R++FD+ NV W S+L+G
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGE------RNVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187
Query: 185 -------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
G QVHA VK GFE+ SLI +Y + G + D
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247
Query: 220 GLALFNFMPERDVVSWTGII---------------------------------------- 239
+F+ M RD V+W +I
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS 307
Query: 240 ------VGCFEC----SCFT-----LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
V +C S FT ++AL+ S C + +A LF NV
Sbjct: 308 LRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGK-----NV 362
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
W +MISG + N N++A+ L S + G+ + +T+++ L + F ++H
Sbjct: 363 VSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV------FVSEMH 416
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
++ + YE VG+ L+D Y +LGN A+++F + KD++AWS ++ G + G
Sbjct: 417 AEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETE 476
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVC-SCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A LF +I N+F SSV+ C S A+ +GKQ HA+ +K ++L
Sbjct: 477 EAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSAL 536
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+ MY K G ID +FK ERD+VSW +I G Q+G+AK+A+ F EM + + +
Sbjct: 537 VTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDA 596
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+TF+GV++AC HAGLVE+ F SM ++ + P ++HY CM+DL +AG + A +I
Sbjct: 597 VTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIIN 656
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
EMPF P T+W ++L A H N +L + AE+L++ PED + YV+LSN+YA G W
Sbjct: 657 EMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQE 716
Query: 644 LSKVRK-AGKKLGEKKAGMSWIEVSS 668
+ VRK K+ +K+ G SWIEV +
Sbjct: 717 RTNVRKLMDKRKVKKEPGYSWIEVKN 742
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 162/443 (36%), Gaps = 119/443 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KN 68
++ C R + K + C+ +K G + D L+ + ++DA LF M KN
Sbjct: 302 IKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKN 361
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT M++ N + A+ L++ M G V+PN F YSA+L ++ + + + H
Sbjct: 362 VVSWTAMISGCLQNGGNDQAVNLFSQMRREG-VKPNHFTYSAIL---TVHYPVFVSEM-H 416
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + E + + LLD YVK G+ D + ++ W++ML+G
Sbjct: 417 AEVIKTNYERSSSVGTALLDAYVKLGN----TIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQ HA+ +K
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
++L+ MY K G ID +F ERD+VSW +I G
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISG---------------------- 570
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y + Q ++A+ + + M +D+ TF
Sbjct: 571 ------------------------------YSQHGQAKKALEVFDEMQKRNMDVDAVTFI 600
Query: 324 SALKACIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+ AC + L+ ++ + H + T + S +IDLY+R G ++ A+ +
Sbjct: 601 GVITACTHAGLVEKGQKYFNSMINDHHINPTMKHY------SCMIDLYSRAGMLEKAMGI 654
Query: 379 FHRLP-KKDVVAWSGLIMGCTKH 400
+ +P W L+ H
Sbjct: 655 INEMPFPPGATVWRTLLGAARVH 677
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/655 (30%), Positives = 335/655 (51%), Gaps = 30/655 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK + R+IK G ++D+F ++ +YA + +A ++F + ++
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++ YT + A+ ++ M G VE N ++V+ AC + +H
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVAL--WNSMLSGG 185
+ + D+ + L+ MY K G L+ ++F+ + NV + ++ G
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPG 435
Query: 186 KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
K + F ++ G ++ ++ SL+ + L C ++ G + + + +V + VG
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSV-LDC--LNLGKQVHGYTLKSGLV--LDLTVG-- 488
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S+L +YS C L E+ KLF + + A W SMISG+ EA
Sbjct: 489 -------SSLFTLYSKCGSLEESYKLFQ------GIPFKDNACWASMISGFNEYGYLREA 535
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
I L S + G D T + L C + + ++HG + +G + +GS L+
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR--GKEIHGYTLRAGIDKGMDLGSALV 593
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
++Y++ G++K A +++ RLP+ D V+ S LI G ++HGL +LLFRDM+ S ++ F
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
ISS+LK + G QVHA+ K G E +SL+ MY K G IDD F +
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
D+++WT +I Q+G+A EA+ + M + KP+++TF+GVLSAC H GLVEE++
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
SM +YG+EP HY CMVD LG++G +AE I M KPD +W ++L AC+
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
H +L + A++ + P D Y+ LSN+ A +G WD + + RK K G +K
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 173/701 (24%), Positives = 304/701 (43%), Gaps = 144/701 (20%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
+Y L D+F +LLS Y++ S+ DA KLFD + + ++VS M++ Y ++ ++R
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
++ M G E N Y +V+ ACS L+ + + V+ + L+D++
Sbjct: 137 FFSKMHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 151 VKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----------VHAFCVKRGFEKE 200
K + D Y + S NV WN++++G + H CV GF+K
Sbjct: 196 SK----NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV--GFQKP 249
Query: 201 D-----------------------------------VTLTSLIDMYLKCGEIDDGLALFN 225
D T+++D+Y KCG + + + +F+
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 226 FMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCE 265
+P VVSWT ++ G E + T+++++ +++CE
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 266 ARKL--------FDQYSSWAA------SAYGNVAL----------------WNSMISGYV 295
A ++ F SS AA S G++ L N MI+ +
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFS 429
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA--CINLLNFNSRFALQVHGLIVTSGYE 353
+++ +AI L + + G+ D ++ S L C+NL QVHG + SG
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL-------GKQVHGYTLKSGLV 482
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
LD VGS+L LY++ G+++ + +LF +P KD W+ +I G ++G A LF +M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ ++ +++VL VCS SL RGK++H + ++ G +K ++L++MY KCG +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
++ +PE D VS + +I G Q+G ++ F++M+ S + +L A
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAA 662
Query: 534 R-----------HA-----GLVEEA--WTIFTSMKPEYGL------------EPHLEHYY 563
HA GL E + +M ++G P L +
Sbjct: 663 ALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWT 722
Query: 564 CMVDLLGQAGCFDDAEQ---LIAEMPFKPDKTIWASMLKAC 601
++ Q G ++A Q L+ E FKPDK + +L AC
Sbjct: 723 ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 137/626 (21%), Positives = 250/626 (39%), Gaps = 154/626 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF---D 62
+ + CG+ + + +H + K G D L+SMY+ ++ + ++F D
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++ R+NIV+ M+T+++ +K+P AIRL+ ML+ G + + CSL LD
Sbjct: 414 DIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEG-------LRTDEFSVCSLLSVLD 464
Query: 123 ---LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + L D + ++L +Y KCGSL + Y + + + A W
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE----ESYKLFQGIPFKDNACWA 520
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
SM+SG GK++H + ++
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA 580
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G +K ++L++MY KCG + +++ +PE D VS + +I G
Sbjct: 581 GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG-------------- 626
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
YS ++ ++ L + SG
Sbjct: 627 -YSQHGLI-------------------------------------QDGFLLFRDMVMSGF 648
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+DS+ +S LKA L+ S QVH I G + VGS+L+ +Y++ G++
Sbjct: 649 TMDSFAISSILKAAA--LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ F ++ D++AW+ LI +HG + A ++ M ++ VL CS
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-- 764
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
H V+ + L S++ Y PE + ++
Sbjct: 765 ---------HGGLVEESY----FHLNSMVKDY-------------GIEPENR--HYVCMV 796
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G++GR +EA ++ M +KP+ + + +L+AC+ G VE + K L
Sbjct: 797 DALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGK---VAAKKAIEL 850
Query: 556 EPH-LEHYYCMVDLLGQAGCFDDAEQ 580
EP Y + ++L + G +D+ E+
Sbjct: 851 EPSDAGAYISLSNILAEVGEWDEVEE 876
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 18/283 (6%)
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L N + LQ H L+ D + +L+ Y+ G++ A +LF +P+ DVV+ +
Sbjct: 61 LCNLRTTKILQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G +H L + F M + N+ SV+ CS L + + V +K
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+ ++ ++LID++ K +D +F+ +V W II G +N F
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 512 QEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYC-- 564
EM KP+ T+ VL+AC G V +A I + G E + + C
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI------KCGAE---DVFVCTA 290
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+VDL + G +A ++ + +P P W ML N+
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSGYTKSNDA 332
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 44/267 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C S+ +GK +H ++ G+ + + G+ L++MY+ SL A +++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + + VS +++++ Y+ + L+ M+ G + F S++LKA +LS +
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG-FTMDSFAISSILKAAALSDES 668
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
LG +H IT+ L + + ++LL MY K GS+ K F Q + ++ W
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING------PDLIAW- 721
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSW 235
T+LI Y + G+ ++ L ++N M E+ D V++
Sbjct: 722 -------------------------TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 236 TGIIVGC-----FECSCFTLSALVDMY 257
G++ C E S F L+++V Y
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDY 783
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD I L+ G +H I K GL + G++LL+MY+ F S++D K
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F ++ ++++WT ++ +Y + + N A+++YN M E G +P+ + VL ACS G
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGG 767
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 344/745 (46%), Gaps = 123/745 (16%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ G D +++ Y L DA LF EM+ ++V+W M++ +
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AI + +M + SV+ +VL A + +LDLG ++H + L + + ++L+
Sbjct: 311 AIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 148 DMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------------- 184
MY KC + K+F+ A N WN+M+ G
Sbjct: 370 SMYSKCEKMEAAAKVFE------ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
G Q H+ +K+ K +L+DMY KCG ++D
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 222 ALFNFMPERDVVSWTGII------------------------------------------ 239
+F M +RD V+W II
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 240 -------VGCFECSC------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
V C C T S+L+DMYS C ++ +ARK+F W+ V
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS------VVS 597
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
N++I+GY N EEA+ L + + G+ TF + ++AC + Q HG
Sbjct: 598 MNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT--LGTQFHGQ 654
Query: 347 IVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLN 403
I G+ E +Y+ G +L+ +Y + A LF L K +V W+G++ G +++G
Sbjct: 655 ITKRGFSSEGEYL-GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A +++M + +Q +VL+VCS L+SLR G+ +H+ + +++T +L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 464 IDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
IDMY KCG++ +F M R +VVSW +I G +NG A++A+ F M QS + P+
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPD 833
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
EITFLGVL+AC HAG V + IF M +YG+E ++H CMVDLLG+ G +A+ I
Sbjct: 834 EITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI 893
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
KPD +W+S+L AC H + I AE+L+ P++ S YV+LSN+YA+ G W+
Sbjct: 894 EAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWE 953
Query: 643 SLSKVRKAGKKLGEKK-AGMSWIEV 666
+ +RK + G KK G SWI+V
Sbjct: 954 KANALRKVMRDRGVKKVPGYSWIDV 978
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 178/644 (27%), Positives = 296/644 (45%), Gaps = 77/644 (11%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ GK++H + + G+ + GN ++ +YA ++ A K FD + K++ +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+S +P +R + + E + PN F +S VL C+ +++ GR IH + + LE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 138 YDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
++ L+DMY KC ++ R++F+ W N W + SG G A
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFE----WIVDP--NTVCWTCLFSGYVKAGLPEEAV 246
Query: 192 CV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
V G + + ++I+ Y++ G++ D LF M DVV+W +I G +
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 247 CFTLS-----------------------ALVDMYSNCN----VLCEARK----------- 268
C T++ + + + +N + V EA K
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 269 -LFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L YS + A N WN+MI GY N ++ + + L + SSG I
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +TFTS L C + + Q H +I+ + VG+ L+D+YA+ G ++ A +
Sbjct: 427 DDFTFTSLLSTCA--ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F R+ +D V W+ +I + S A+ LF+ M + ++S LK C+ +
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +GKQVH VK G +++ T +SLIDMY KCG I D +F +PE VVS +I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
QN +EA+ FQEM+ + P+EITF ++ AC H T F + G
Sbjct: 605 YSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEAC-HKPESLTLGTQFHGQITKRGFSS 662
Query: 558 HLEHYYCMVDLLG---QAGCFDDAEQLIAEMPFKPDKTIWASML 598
E Y + LLG + +A L +E+ +W M+
Sbjct: 663 EGE--YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 169/663 (25%), Positives = 291/663 (43%), Gaps = 93/663 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++ G+ +HC +IK GL ++ + G L+ MYA ++DA ++F+ + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V WT + + Y P A+ ++ M + G P+ + V+ G L RL+
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
++ D V N ++ + K G T + ++ +S + S+LS
Sbjct: 286 EMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G VHA +K G +SL+ MY KC +++ +F + E++ V W +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 241 G--------------------CFECSCFTLSAL--------------------------- 253
G + FT ++L
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 254 --------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
VDMY+ C L +AR++F++ NV WN++I YV +E EA
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCD-----RDNVT-WNTIIGSYVQDENESEAFD 515
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L ++ G+ D S LKAC ++ QVH L V G + D GS+LID+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQ--GKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++ G +K A ++F LP+ VV+ + LI G +++ L A +LF++M+ + ++
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITF 632
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALF-KFM 483
+++++ C SL G Q H KRGF E L SL+ MY+ + + ALF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+ +V WTG++ G QNG +EA+ +++EM + P++ TF+ VL C + E
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 544 TIFTSMKPEYGLEPHLEH------YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
I + L HL H ++D+ + G + Q+ EM + + W S+
Sbjct: 753 AI-------HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 598 LKA 600
+
Sbjct: 806 ING 808
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 236/508 (46%), Gaps = 41/508 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G H IIK L++++F GN L+ MYA +L DA ++F+ M ++
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W T++ +Y ++ + A L+ M G V +G ++ LKAC+ L G+ +H
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ L+ D ++L+DMY KCG + RK+F W+ V N++++G Q
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS------VVSMNALIAGYSQ 607
Query: 188 --------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ + RG ++T ++++ K + G + +R S G
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS-EGEY 666
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+G +L+ MY N + EA LF + SS + + LW M+SG+ N
Sbjct: 667 LGI---------SLLGMYMNSRGMTEACALFSELSSPKS-----IVLWTGMMSGHSQNGF 712
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EEA+ + G+ D TF + L+ C L + R +H LI ++LD +
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL--REGRAIHSLIFHLAHDLDELTS 770
Query: 360 SNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LID+YA+ G++K + ++F + ++ +VV+W+ LI G K+G A +F M S+
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCG---EID 474
++ VL CS + G+++ + + G E + ++D+ + G E D
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNG 502
D + P D W+ ++ C +G
Sbjct: 891 DFIEAQNLKP--DARLWSSLLGACRIHG 916
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 231/531 (43%), Gaps = 43/531 (8%)
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GK 186
LE D N++L MY G + L S + + N ++ +LS G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
Q+H +K G E+ +L+DMY KC I D +F ++ + + V WT + G +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 247 C--------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+++ Y L +AR LF + SS +V
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS------PDVVA 294
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN MISG+ AI ++ S + T S L A + N + L VH
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD--LGLVVHAE 352
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G + VGS+L+ +Y++ +++A ++F L +K+ V W+ +I G +G +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF DM +S +++ F +S+L C+ L G Q H+ +K+ K +L+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG ++D +F+ M +RD V+W II Q+ EA F+ M + +
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 527 LGVLSACRHA-GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L AC H GL + S+K GL+ L ++D+ + G DA ++ + +
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKC--GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
P + + L A + NN + ++ +++L T +PS+ + V A
Sbjct: 591 P--EWSVVSMNALIAGYSQNNLEEAVVLFQEML-TRGVNPSEITFATIVEA 638
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 171/446 (38%), Gaps = 111/446 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ C + QGK +HC +K GL +D+ TG++L+ MY+ + DA K+F +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VS ++ Y+ N A+ L+ ML G V P+ ++ +++AC L LG
Sbjct: 592 EWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGT 649
Query: 126 LIHERITREKLEYDTVLMN-TLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML 182
H +IT+ + + +LL MY+ +T LF + S+ + + LW M+
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS-----IVLWTGMM 704
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG G+ +H+ +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFECSCFTLSALVDMY 257
+++T +LIDMY KCG++ +F+ M R +VVSW +I G
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING---------------- 808
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
Y N E+A+ + + S +
Sbjct: 809 ------------------------------------YAKNGYAEDALKIFDSMRQSHIMP 832
Query: 318 DSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D TF L AC + + R ++ +I G E + ++DL R G ++ A
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 377 ELFH-RLPKKDVVAWSGLIMGCTKHG 401
+ + K D WS L+ C HG
Sbjct: 891 DFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V LR C S+++G+++H I D T N L+ MYA + + ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
DEM R+ N+VSW +++ Y N A+++++ M + + P+ + VL ACS +G
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGK 849
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+ GR I E I + +E + ++D+ + G L D + A + + LW+
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA--DDFIE-AQNLKPDARLWS 906
Query: 180 SMLSGGKQVHA 190
S+L G ++H
Sbjct: 907 SLL-GACRIHG 916
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 218/743 (29%), Positives = 343/743 (46%), Gaps = 108/743 (14%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ G++ H R++ G +F N LL MYA AH +FD M ++ VSW TM+T
Sbjct: 46 ALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLT 105
Query: 78 AYTSNKRPNWAIRL-----------YNHML----EYG---------------SVEPNGFM 107
AY A L +N +L + G V P+
Sbjct: 106 AYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTT 165
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS-- 165
+ +LKAC DL LG IH + LE D + L+DMY KC SL L +
Sbjct: 166 LAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMG 225
Query: 166 -----NWAASAYGNVALWNSM--------------LSGGKQVHAFCVKRGFEKEDVTLTS 206
+W A G V M LS +Q+HA +K F + V T+
Sbjct: 226 ERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTA 285
Query: 207 LIDMYLKCGEIDDG-------------------------------LALFNFMPERD---- 231
++D+Y K + D + LF FM
Sbjct: 286 IVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFG 345
Query: 232 VVSWTGIIVGCFECSCFTL-----SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
VVS +G+ C E F + +A++D+Y C L EA +F + + +
Sbjct: 346 VVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS------ 399
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN++I+ NE E+ I L+ + SGM D +T+ S LKAC L + + L VHG
Sbjct: 400 WNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLE--YGLVVHGK 457
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ SG LD V S ++D+Y + G + AL+L R+ +++V+W+ +I G + + + A
Sbjct: 458 AIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEA 517
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
F +M++ + F ++VL C+ LA++ GKQ+H +K+ ++ ++L+DM
Sbjct: 518 QKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDM 577
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG + D +F+ + + D VSW +I G +G+ EA+ F+ ++ + PN TF
Sbjct: 578 YAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATF 637
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VL AC H GL+++ F M Y LEP LEH+ CM +A + I MP
Sbjct: 638 VAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMP 689
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+ D IW ++L C+ + ++ A +L P+D S Y++LSNVYA G W +S+
Sbjct: 690 LEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSR 749
Query: 647 VRKAGKKLG-EKKAGMSWIEVSS 668
R+ ++ +K+ G SWIEV S
Sbjct: 750 TRRLMRQGRLKKEPGCSWIEVQS 772
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 190/446 (42%), Gaps = 70/446 (15%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+S L+ G+ HA + GF L+ MY +CG +F+ MP RD VSW +
Sbjct: 44 HSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTM 103
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ + + D ++LC +V WN+++SGY
Sbjct: 104 LT--------AYAHMGDTGMATSLLC-------------VMPDPDVVSWNALLSGYCQRG 142
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ + L + G+ D T LKAC L + +Q+H L V +G E+D
Sbjct: 143 MFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLA--LGVQIHALAVKTGLEMDVRA 200
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
GS L+D+Y + +++ AL FH + +++ V+W +I GC + + Q
Sbjct: 201 GSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGC----------------VQNEQ 244
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + K +CL++ R Q+HA +K F + + T+++D+Y K + D
Sbjct: 245 YMRGLELLCRCKAITCLSTAR---QLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARR 301
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC----- 533
F +P V + ++VG + G EA+ FQ M +S + ++ GV SAC
Sbjct: 302 AFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG 361
Query: 534 -------RHAGL--------VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
R+A L + EA+ +F M+ + + ++ L Q C++D
Sbjct: 362 FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS-----WNTIIAALEQNECYEDT 416
Query: 579 EQLIAEM---PFKPDKTIWASMLKAC 601
+ EM + D + S+LKAC
Sbjct: 417 IVHLNEMLRSGMEADDFTYGSVLKAC 442
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 123/232 (53%), Gaps = 18/232 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +S++ G +H + IK GL D F + ++ MY + +A KL D + + +
Sbjct: 439 LKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQEL 498
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ ++ NK+ A + ++ ML+ G V+P+ F Y+ VL +C+ ++LG+ IH
Sbjct: 499 VSWNSIIAGFSLNKQSEEAQKFFSEMLDMG-VKPDHFTYATVLDSCANLATIELGKQIHG 557
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+I ++++ D + +TL+DMY KCG++ ++ +F++ + WN+M+ G
Sbjct: 558 QIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKL------DFVSWNAMICGYAL 611
Query: 185 -GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPER 230
G+ A + +K +V T +++ G +DDG F+ M R
Sbjct: 612 HGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSR 663
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 205/654 (31%), Positives = 340/654 (51%), Gaps = 41/654 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+I K LH ++ G +QD+ L+++YA L+ + F + RKNI SW +MV+
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY R ++ +L V P+ + + VLKAC D G +H + + E
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFE 179
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
+D + +L+ +Y + G++ K+F +V WN+M+SG G A
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVF------VDMPVRDVGSWNAMISGFCQNGNVAEAL 233
Query: 192 CVKRGFEKEDVTLTSLI--DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
V + E+V + ++ M C + +D + V+ +I E F
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVG--------GVLVHLYVIKHGLESDVFV 285
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+AL++MYS L +A+++FD ++ WNS+I+ Y EQN++ +T L
Sbjct: 286 SNALINMYSKFGRLQDAQRVFD------GMEVRDLVSWNSIIAAY---EQNDDPVTALGF 336
Query: 310 IHS---SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNLIDL 365
GM D T S L + L+ + R VHG +V + E+D ++G+ L+++
Sbjct: 337 FKEMLFVGMRPDLLTVVS-LASIFGQLS-DRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFI 424
YA+LG++ A +F +LP +DV++W+ LI G ++GL S A + M V NQ
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S+L S + +L++G ++H +K + T LIDMY KCG ++D ++LF +P
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+ V W II G +G ++A+ F++M +K + ITF+ +LSAC H+GLV+EA
Sbjct: 515 QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW 574
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F +M+ EY ++P+L+HY CMVDL G+AG + A L++ MP + D +IW ++L AC H
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIH 634
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
N +L + +++LL E+ YV+LSN+YA +G W+ KVR + G +K
Sbjct: 635 GNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRK 688
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 176/450 (39%), Gaps = 109/450 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C Q + G +H +IK+GL D+F N L++MY+ F L DA ++
Sbjct: 246 MDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRV 305
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +++VSW +++ AY N P A+ + ML G + P+ ++ D
Sbjct: 306 FDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG-MRPDLLTVVSLASIFGQLSD 364
Query: 121 LDLGRLIHERITREK-LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NW----- 167
+GR +H + R + LE D V+ N L++MY K GS+ R +F+Q +W
Sbjct: 365 RRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLIT 424
Query: 168 ----------AASAYG----------NVALWNSMLSG---------GKQVHAFCVKRGFE 198
A AY N W S+L G ++H +K
Sbjct: 425 GYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLF 484
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ T LIDMY KCG ++D ++LF +P+ V W II
Sbjct: 485 LDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAII------------------- 525
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
SS +G E+A+ L + + G+ D
Sbjct: 526 ---------------SSLGIHGHG------------------EKALQLFKDMRADGVKAD 552
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNV 372
TF S L AC S L + +Y + NL +DL+ R G +
Sbjct: 553 HITFVSLLSAC-------SHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYL 605
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ A L +P + D W L+ C HG
Sbjct: 606 EKAYNLVSNMPIQADASIWGTLLAACRIHG 635
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V + C+ ++ KQ+HA + G ++ + LT L+ +Y G++ FK + ++
Sbjct: 57 VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEE--AWT 544
+ SW ++ + GR ++++ E++ S ++P+ TF VL AC E+ W
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWV 173
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-CET 603
+ + G E + ++ L + G + A ++ +MP + D W +M+ C+
Sbjct: 174 L------KMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQN 226
Query: 604 HNNTKLVSII 613
N + + ++
Sbjct: 227 GNVAEALRVL 236
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 327/629 (51%), Gaps = 55/629 (8%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M ++N+VSW ++++ YT + + L+ + + F +S L C + DL L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEA-RMSDLRLDKFTFSNALSVCGRTLDLRL 59
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
GRLIH IT L +L N+L+DMY KCG + R +F+ +A +V+ WNS+
Sbjct: 60 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE-----SADELDSVS-WNSL 113
Query: 182 LSGGKQVHAF---------CVKRGFEKEDVTLTSLIDM-------YLKCGEIDDGLALFN 225
++G ++ + ++ G L S + ++CG++ G A+
Sbjct: 114 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV-K 172
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ DVV T AL+D Y+ L +A K+F NV
Sbjct: 173 LGLDLDVVVGT---------------ALLDTYAKIGDLEDATKIFKLMPD------PNVV 211
Query: 286 LWNSMISGYV-----LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
++N+MI+G++ +E EA+ L + S GM +TF+S LKAC + F
Sbjct: 212 MYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC--G 269
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+H I + D +G+ L++LY+ G+++ L+ FH PK DVV+W+ LI+G ++
Sbjct: 270 KQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQN 329
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G LF +++ S + ++F IS +L C+ LA+++ G+Q+HA+ +K G I
Sbjct: 330 GQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQ 389
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
S I MY KCG+ID FK D+VSW+ +I Q+G AKEA+ F+ M S +
Sbjct: 390 NSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIA 449
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PN ITFLGVL AC H GLVEE F MK ++G+ P+++H C+VDLLG+AG +AE
Sbjct: 450 PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAES 509
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
I + F+ D +W S+L AC H T +AE+++ PE + YV+L N+Y G+
Sbjct: 510 FIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGI 569
Query: 641 WDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+++R K G KK G+SWIEV +
Sbjct: 570 QMPATEIRNLMKDRGVKKEPGLSWIEVGN 598
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 221/579 (38%), Gaps = 147/579 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL CG+ ++ G+ +H I GL + N+L+ MY ++ A +F+ +
Sbjct: 47 ALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELD 106
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLDLGRL 126
VSW +++ Y + +RL ML +G + N + + LKAC + S ++ G++
Sbjct: 107 SVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG-LNLNSYALGSALKACGSNFSSSIECGKM 165
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + L+ D V+ LLD Y K G L K+F + NV ++N+M++G
Sbjct: 166 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD------PNVVMYNAMIAG 219
Query: 185 -------------------------------------------------GKQVHAFCVKR 195
GKQ+HA K
Sbjct: 220 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY 279
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ ++ +L+++Y G I+DGL F+ P+ DVVSWT +IVG
Sbjct: 280 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG-------------- 325
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+V N Q E +TL + SG
Sbjct: 326 --------------------------------------HVQNGQFEGGLTLFHELLFSGR 347
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D +T + L AC NL S Q+H + +G I+ ++ I +YA+ G++ SA
Sbjct: 348 KPDEFTISIMLSACANLAAVKS--GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 405
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
F D+V+WS +I +HG A LF M S N VL CS
Sbjct: 406 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS-- 463
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
H V+ G Y + + D G+ +V I+
Sbjct: 464 ---------HGGLVEEGLR------------YFEIMKKDHGIT-------PNVKHSACIV 495
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
G+ GR EA ++ ++ S + + + + +LSACR
Sbjct: 496 DLLGRAGRLAEAESF---IMDSGFEGDPVMWRSLLSACR 531
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 315/612 (51%), Gaps = 84/612 (13%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML 182
R +H + + + + N L+D Y KCGSL R++FD+ N+ WNS++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ------RNIYTWNSVV 93
Query: 183 SGGKQV----HAFCVKRGF-EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV---- 233
+G ++ A + R E++ T S++ + + ++ L F M + V
Sbjct: 94 TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 153
Query: 234 SWTGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
S+ ++ C F + SALVDMYS C + +A+++FD+
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
NV WNS+I+ + N EA+ + + S + D T S + AC +L
Sbjct: 214 GD------RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLS 267
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLP--------- 383
+ +VHG +V + + I+ SN +D+YA+ +K A +F +P
Sbjct: 268 AI--KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 384 ----------------------KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+++VV+W+ LI G T++G N A LF + +
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKEDITL-TSLIDMYLKCGEIDD 475
+ +++LK C+ LA L G Q H +K GF E++DI + SLIDMY+KCG +++
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
G +F+ M ERD VSW +I+G QNG EA+ F+EM++S KP+ IT +GVLSAC H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AG VEE F+SM ++G+ P +HY CMVDLLG+AG ++A+ +I EMP +PD IW
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
S+L AC+ H N L +AE+LL P + YV+LSN+YA LG W+ + VRK+ +K G
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 656 -EKKAGMSWIEV 666
K+ G SWI++
Sbjct: 626 VTKQPGCSWIKI 637
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/561 (25%), Positives = 252/561 (44%), Gaps = 114/561 (20%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ +H +IK G S +IF N L+ Y+ SL D ++FD+M ++NI +W ++VT T
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 83 KRPNWAIRLYNHMLE-------------------------YGSVEPNGFM-----YSAVL 112
+ A L+ M E + + GF+ +++VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAAS 170
ACS D++ G +H I + D + + L+DMY KCG++ +++FD+ +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD---- 215
Query: 171 AYGNVALWNSMLSG--------------------------------------------GK 186
NV WNS+++ G+
Sbjct: 216 --RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 187 QVHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+VH VK + D+ L+ + +DMY KC I + +F+ MP R+V++ T +I G
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG---- 329
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y+ AR +F + A NV WN++I+GY N +NEEA++
Sbjct: 330 -----------YAMAASTKAARLMFTKM------AERNVVSWNALIAGYTQNGENEEALS 372
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINL----LNFNSRFALQVHGLIVTSGYELDYIVGSN 361
L + +C Y+F + LKAC +L L + + HG SG E D VG++
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+Y + G V+ +F ++ ++D V+W+ +I+G ++G + A LFR+M+ S + +
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAF-CVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLA 478
+ VL C + G+ H F + R F + T ++D+ + G +++ +
Sbjct: 493 HITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 479 LFKFMP-ERDVVSWTGIIVGC 498
+ + MP + D V W ++ C
Sbjct: 551 MIEEMPMQPDSVIWGSLLAAC 571
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 186/476 (39%), Gaps = 145/476 (30%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +G +H I K D++ G+ L+ MY+ ++NDA ++FDEM +N+
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++T + N A+ ++ MLE VEP+ ++V+ AC+ + +G+ +H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 130 RITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ---------------YSNWAAS- 170
R+ + +KL D +L N +DMY KC + R +FD Y+ A++
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 171 ---------AYGNVALWNSMLSG------------------------------------- 184
A NV WN++++G
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 185 -------GKQVHAFCVKRGF-----EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERD 231
G Q H +K GF E++D+ + SLIDMY+KCG +++G +F M ERD
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
VSW +I+G +A + YGN
Sbjct: 458 CVSWNAMIIG----------------------------------FAQNGYGN-------- 475
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
EA+ L + SG D T L AC G S
Sbjct: 476 ----------EALELFREMLESGEKPDHITMIGVLSAC-------GHAGFVEEGRHYFSS 518
Query: 352 YELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
D+ V + ++DL R G ++ A + +P + D V W L+ C H
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 331/665 (49%), Gaps = 61/665 (9%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
++ RI+K G D N + + L+ A +LF++M KN VS M++ Y +
Sbjct: 33 NIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 92
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A +L++ M+E +V ++ ++ S + ++ R E D V
Sbjct: 93 NLGEARKLFDGMVERTAV-----TWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
TLL G ++ +Q + QV +K G++ +
Sbjct: 148 VTLL-----SGCNGHEMGNQIT---------------------QVQTQIIKLGYDSRLIV 181
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---VGC-----------------F 243
+L+D Y K +D LF MPE D ++ ++ +G F
Sbjct: 182 GNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF 241
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F +AL+D YS + + +ARKLFD+ +Y N +ISGY + +++ A
Sbjct: 242 VWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY------NVIISGYAWDGKHKYA 295
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
L + + + F + L N L++ Q+H + + + + +VG++L+
Sbjct: 296 FDLFRELQFTAFDRKQFPFATMLSIASNTLDW--EMGRQIHAQTIVTTADSEILVGNSLV 353
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+YA+ G + A +F L + V W+ +I + G LF M ++ +Q
Sbjct: 354 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 413
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+S+L+ + +ASL GKQ+H+F +K GF + ++L+D+Y KCG I D + F+ M
Sbjct: 414 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM 473
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
P+R++VSW +I QNG A+ + F+EM+ S L+P+ ++FLGVLSAC H+GLVEE
Sbjct: 474 PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL 533
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F SM Y L+P EHY +VD+L ++G F++AE+L+AEMP PD+ +W+S+L AC
Sbjct: 534 WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRI 593
Query: 604 HNNTKLVSIIAEQLLATSP-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+QL D + YV +SN+YA G W+++SKV KA + G KK
Sbjct: 594 HKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAY 653
Query: 662 SWIEV 666
SW+E+
Sbjct: 654 SWVEI 658
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 179/435 (41%), Gaps = 113/435 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H +IK ++F N LL Y+ S+ DA KLFDEM ++ VS+ +++ Y
Sbjct: 229 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAW 288
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ + +A L+ L++ + + F ++ +L S + D ++GR IH + + + +
Sbjct: 289 DGKHKYAFDLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 347
Query: 142 LMNTLLDMYVKCGSLTRK--LFDQYSN-----WAA--SAY-------GNVALWNSM---- 181
+ N+L+DMY KCG +F ++ W A SAY + L+N M
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 407
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
LS GKQ+H+F +K GF + ++L+D+Y KCG I D +
Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F MP+R++VSW +I
Sbjct: 468 QTFQEMPDRNIVSWNAMI------------------------------------------ 485
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLN 334
S Y N + E + + SG+ DS +F L AC + L +
Sbjct: 486 ----------SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH 535
Query: 335 FNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
FNS +T Y+LD ++++D+ R G A +L +P D + WS
Sbjct: 536 FNS----------MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 585
Query: 392 GLIMGCTKHGLNSLA 406
++ C H LA
Sbjct: 586 SVLNACRIHKNQELA 600
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 202/546 (36%), Gaps = 146/546 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V L C Q + +IIK G + GN L+ Y L+ A +LF
Sbjct: 143 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 202
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM E + F ++AVL A D+
Sbjct: 203 KEMP------------------------------------EIDSFTFAAVLCANIGLDDI 226
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL-- 177
LG+ IH + + ++ + N LLD Y K S+ RKLFD+ +Y NV +
Sbjct: 227 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY-NVIISG 285
Query: 178 --WN--------------------------SMLS---------GGKQVHAFCVKRGFEKE 200
W+ +MLS G+Q+HA + + E
Sbjct: 286 YAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 345
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ SL+DMY KCG+ ++ +F + R V WT +I
Sbjct: 346 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMI--------------------- 384
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
S YV EE + L + + + + D
Sbjct: 385 -------------------------------SAYVQKGFYEEGLQLFNKMRQASVIADQA 413
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF S L+A ++ + + Q+H I+ SG+ + GS L+D+YA+ G++K A++ F
Sbjct: 414 TFASLLRASASIASLS--LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 471
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+P +++V+W+ +I ++G F++M+ S + VL CS +
Sbjct: 472 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 531
Query: 441 G-------KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
G Q++ +R S++DM + G ++ L MP + D + W+
Sbjct: 532 GLWHFNSMTQIYKLDPRREH------YASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS 585
Query: 493 GIIVGC 498
++ C
Sbjct: 586 SVLNAC 591
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 429 LKVCSCLASLRRGK-------QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
L + LASL+ K + A VK GF+ + + +LK GE+ LF+
Sbjct: 12 LTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFE 71
Query: 482 FMP-------------------------------ERDVVSWTGIIVGCGQNGRAKEAIAY 510
MP ER V+WT +I G Q + KEA
Sbjct: 72 KMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFEL 131
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F +M + +P+ +TF+ +LS C + + + T + + G + L +VD
Sbjct: 132 FVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQI-IKLGYDSRLIVGNTLVDSYC 190
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ D A QL EMP + D +A++L
Sbjct: 191 KSNRLDLACQLFKEMP-EIDSFTFAAVL 217
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 338/678 (49%), Gaps = 40/678 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH--KLFDEMARK 67
LR C ++ ++H + + + +F N LL+ Y H +L DEM R+
Sbjct: 9 LRSCA---ALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRR 65
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N VS+ ++ AY+ P ++ + + V + F Y+A L ACS + D+ G+ +
Sbjct: 66 NAVSYNLVIVAYSRAGLPALSLATFARARAWARV-VDRFTYAAALAACSRALDVRTGKAV 124
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + L L N++ MY +CG + R++FD AA +V+ WN++LSG
Sbjct: 125 HAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFD-----AAEERDDVS-WNALLSGY 178
Query: 185 --------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+V + + G L S+I C A + R +
Sbjct: 179 VRAGAREETLEVFSLMCRHGLGWNSFALGSIIKC---CASSSSYAAAGDVGGGRIAEAVH 235
Query: 237 GIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G +V + F SA++DMY+ L A LF NV + N+MI+G+
Sbjct: 236 GCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPD------PNVIVLNAMIAGFC 289
Query: 296 LNEQNE---EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
E + EA+ L S + S GM ++F+S L+AC F F Q+HG ++ +
Sbjct: 290 REEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFG--FGKQIHGQVLKHSF 347
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+ D +GS LIDLY+ G ++ F LPK+DVV W+ +I GC ++ L A LF++
Sbjct: 348 QGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQE 407
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ + F +SSV+ C+ LA R G+Q+ VK GF + S I M + G+
Sbjct: 408 SVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGD 467
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL-KPNEITFLGVLS 531
+D F+ M RDVVSW+ +I +G A++A+ F EM+ +++ PNEITFL +L+
Sbjct: 468 VDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILT 527
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GLV+E + M EYGL P ++H C+VDLLG+AG DAE I + F D
Sbjct: 528 ACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDA 587
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+W S+L +C H + + ++A++++ P + YV+L N+Y G S SK R
Sbjct: 588 VVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLM 647
Query: 652 KKLGEKK-AGMSWIEVSS 668
K+ G KK G+SWIE+SS
Sbjct: 648 KERGVKKEPGLSWIELSS 665
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 213/685 (31%), Positives = 355/685 (51%), Gaps = 68/685 (9%)
Query: 22 GKSLHCRIIKYGLSQ--DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
GK +H + K+G + N L++MY L DA+K+FD + ++ VSW ++++A
Sbjct: 29 GKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISAL 88
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD---LGRLIHERITREKL 136
+ AI+ + ML G EP+ F ++ ACS D LG+ IH R K
Sbjct: 89 CRFEEWEVAIKAFRLMLMEG-FEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR-KG 146
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC---- 192
+ T N L+ MY K G +L D S ++ WNSM+S Q F
Sbjct: 147 HWRTFSNNALMAMYAKLG----RLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALM 202
Query: 193 -----VKRGFEKEDVTLTSLIDMYLKCGEID---DGLALFNFMPERDVVSWTGIIVGCFE 244
V G + + VT S++ C +D G + + D V E
Sbjct: 203 FLRLMVLEGVKPDGVTFASVLP---ACSHLDLLRTGKEIHAYALRTDDV---------IE 250
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
S F SALVDMY NC + R +FD + LWN+MI+GY +E +E+A+
Sbjct: 251 NS-FVGSALVDMYCNCGQVESGRLVFDSVLDR------KIGLWNAMIAGYAQSEHDEKAL 303
Query: 305 TLLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
L + ++ G+ ++ T +S + A + + + +HG ++ G E + + + LI
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG--IHGYVIKRGLETNRYLQNALI 361
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM---------- 413
D+Y+R+G++K++ +F + +D+V+W+ +I G +S A LL +M
Sbjct: 362 DMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYD 421
Query: 414 --INSNQDV----NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
N + V N + +VL C+ L++L +GK++HA+ ++ + ++L+DMY
Sbjct: 422 GDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMY 481
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-----SRLKPN 522
KCG ++ +F MP R+V++W II+ G +G+ KE++ F++M+ +KP
Sbjct: 482 AKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPT 541
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
E+TF+ + ++C H+G+V+E ++F MK E+G+EP +HY C+VDL+G+AG ++A L+
Sbjct: 542 EVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLV 601
Query: 583 AEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
MP DK W+S+L AC ++N ++ I AE LL P+ S YV+LSN+Y++ G+W
Sbjct: 602 NTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLW 661
Query: 642 DSLSKVRKAGKKLGEKK-AGMSWIE 665
D +R+ K +G KK G SWIE
Sbjct: 662 DKAMNLRRRMKAMGVKKEPGCSWIE 686
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 135/320 (42%), Gaps = 54/320 (16%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+ IV A C I + + +H +IK GL + + N L+ MY+ + + ++FD
Sbjct: 322 MSSIVPAYVRC---EGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFD 378
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM--LEYGSV-------------EPNGFM 107
M ++IVSW T++T+Y R + A+ L + M +E S +PN
Sbjct: 379 SMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSIT 438
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS 165
VL C+ L G+ IH R L + + L+DMY KCG +L R++FDQ
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM- 497
Query: 166 NWAASAYGNVALWNSML-------SGGKQVHAF--CVKRGFEKEDVTLT--SLIDMYLKC 214
NV WN ++ G + + F V G + +V T + I ++ C
Sbjct: 498 -----PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASC 552
Query: 215 ---GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
G +D+GL+LF+ M + C +VD+ + EA L +
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAPDHYAC----------IVDLVGRAGKVEEAYGLVN 602
Query: 272 QYSSWAASAYGNVALWNSMI 291
S + V W+S++
Sbjct: 603 TM----PSGFDKVGAWSSLL 618
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C ++ +GK +H I+ L+ + G+ L+ MYA LN A ++FD+M
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP 498
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS----VEPNGFMYSAVLKACSLSGDL 121
+N+++W ++ AY + + ++ L+ M+ G+ V+P + A+ +CS SG +
Sbjct: 499 IRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMV 558
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS--NWAASAYGNVALW 178
D G L H+ +E ++D+ + G K+ + Y N S + V W
Sbjct: 559 DEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAG----KVEEAYGLVNTMPSGFDKVGAW 614
Query: 179 NSMLSGGKQVH 189
+S+L + H
Sbjct: 615 SSLLGACRIYH 625
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK-EDITL-TSLIDMYLKC 470
MI S + F +VLK + + L GKQ+HA K G+ +T+ +L++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G + D +F + ERD VSW II + + AI F+ M+ +P+ T + +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 531 SAC 533
AC
Sbjct: 121 LAC 123
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 325/588 (55%), Gaps = 45/588 (7%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
++ G + +Y+++L+ C+ + G IH + + LE+D + N+LL +Y K G+
Sbjct: 109 IDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT 168
Query: 156 ---LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-----CVKRGFEKEDVT 203
TRK+FD +V W SM+SG GK +++ + G E T
Sbjct: 169 DFPETRKVFD------GLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 222
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-CFECSCFTLSALVDMYSNCNV 262
L+++I C E+ D L L + G+++G F+ + SAL+DM+
Sbjct: 223 LSAVIK---ACSELGD-LKLGRI--------FHGVVLGRGFDSNYVIASALIDMHGRNCA 270
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYT 321
L +AR+LFD+ + W S+IS N+ +EA+ S GMC D +T
Sbjct: 271 LDDARQLFDELLE------PDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFT 324
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F + L AC NL +VH ++T+G+ + +V S+L+D+Y + G+V + +F R
Sbjct: 325 FGTVLTACGNLGRLKQ--GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR 382
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P K+ V+WS L+ G ++G +FR M + V+ + ++L+ C+ LA++R+G
Sbjct: 383 MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQG 438
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K+VH +++G ++ I ++L+D+Y KCG I+ +F MP R++++W +I G QN
Sbjct: 439 KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 498
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
GR +EA+ F +M++ +KP+ I+F+G+L AC H GLV+E F SM +YG++ +EH
Sbjct: 499 GRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH 558
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y CMVDLLG+AG ++AE LI F+ D ++WA++L AC T N ++ IA++++
Sbjct: 559 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 618
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
P+ YV+L+NVY +G W+ ++R+ K G K G SWIE +
Sbjct: 619 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKN 666
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 213/491 (43%), Gaps = 118/491 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEMARKN 68
L+ C + + G +H +IK GL D F GN+LL++Y T + K+FD + K+
Sbjct: 125 LQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKD 184
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SWT+M++ Y +P ++ L+ ML YG VEPN F SAV+KACS GDL LGR+ H
Sbjct: 185 VISWTSMISGYVRVGKPMNSLELFWKMLAYG-VEPNAFTLSAVIKACSELGDLKLGRIFH 243
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA------------ 169
+ + + V+ + L+DM+ + +L R+LFD+ W +
Sbjct: 244 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 303
Query: 170 --------------------------SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
+A GN+ L GK+VHA + GF V
Sbjct: 304 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLG----RLKQGKEVHAKVITTGFCGNVVV 359
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------------------- 241
+SL+DMY KCG + + +F+ MP ++ VSW+ ++ G
Sbjct: 360 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 419
Query: 242 -CF-----------------ECSC-----------FTLSALVDMYSNCNVLCEARKLFDQ 272
CF E C SALVD+Y+ C + A+ +FDQ
Sbjct: 420 YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQ 479
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN- 331
N+ WNSMI G+ N + EEA+ + + + G+ D +F L AC +
Sbjct: 480 M------PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHR 533
Query: 332 -LLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDV 387
L++ + + +T Y + + S ++DL R G ++ A L + D
Sbjct: 534 GLVDEGREYFIS-----MTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDS 588
Query: 388 VAWSGLIMGCT 398
W+ L+ CT
Sbjct: 589 SLWAALLGACT 599
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 198/458 (43%), Gaps = 77/458 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + +K G+ H ++ G + + L+ M+ +L+DA +LFDE+ +
Sbjct: 227 IKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDA 286
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ WT++++A T N + A+R + M + P+GF + VL AC G L G+ +H
Sbjct: 287 ICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHA 346
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ + V+ ++L+DMY KCGS+ ++++FD+ N W+++L G
Sbjct: 347 KVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM------PIKNSVSWSALLGGYCQ 400
Query: 185 -------------------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
GK+VH +++G ++ + ++L
Sbjct: 401 NGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESAL 460
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF-----ECSCFTLSALV------DM 256
+D+Y KCG I+ +F+ MP R++++W +I G E + + +V D
Sbjct: 461 VDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDY 520
Query: 257 YSNCNVL--CEARKLFDQYSSWAASA---YG---NVALWNSMISGYVLNEQNEEAITLLS 308
S +L C R L D+ + S YG + ++ M+ EEA L
Sbjct: 521 ISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEIL-- 578
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFN--SRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
I +S DS + + L AC N+ R A +V L Y L Y++ L ++Y
Sbjct: 579 -IETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMEL--EPDYHLSYVL---LANVY 632
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
+G AL + + + V G TK+ L S
Sbjct: 633 KAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGS 670
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I+ K G S A L + + + +S+L+ C+ + + G Q+HA +K G
Sbjct: 90 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 149
Query: 454 EKEDITLTSLIDMYLKCG-EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E + SL+ +Y K G + + +F + +DV+SWT +I G + G+ ++ F
Sbjct: 150 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 209
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M+ ++PN T V+ AC G ++ IF + G + + ++D+ G+
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRN 268
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKA 600
DDA QL E+ +PD W S++ A
Sbjct: 269 CALDDARQLFDEL-LEPDAICWTSIISA 295
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 213/758 (28%), Positives = 351/758 (46%), Gaps = 105/758 (13%)
Query: 6 IVEALRHCGQRRSI-KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I + CG+ S+ ++G +H + K GL D++ +L +Y + ++ + K+F+EM
Sbjct: 44 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 103
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+N+VSWT+++ Y+ P I +Y M G V N S V+ +C L D LG
Sbjct: 104 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSCGLLKDESLG 162
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG-- 173
R I ++ + LE + N+L+ M G++ +FDQ S N A+AY
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 174 --------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL 204
N +++LS G+ +H VK GF+
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSW----------------------------- 235
+L+ MY G + +F MP +D++SW
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 236 ------TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
T + CF F +ALV MY + E+R++
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Q +V WN++I GY +E ++A+ + G+ + T S L AC
Sbjct: 403 LLQMPRR------DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + R +H IV++G+E D V ++LI +YA+ G++ S+ +LF+ L ++++
Sbjct: 457 LLPGDLLER-GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ HG L M + ++QF S L + LA L G+Q+H V
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K GFE + + DMY KCGEI + + + R + SW +I G++G +E A
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F EM++ +KP +TF+ +L+AC H GLV++ + + ++GLEP +EH C++DLL
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 695
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G++G +AE I++MP KP+ +W S+L +C+ H N AE L PED S YV
Sbjct: 696 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 755
Query: 630 MLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+ SN++AT G W+ + VRK G K +KK SW+++
Sbjct: 756 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 793
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 160/668 (23%), Positives = 268/668 (40%), Gaps = 139/668 (20%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-D 122
M +N VSW TM++ + + M + G ++P+ F+ ++++ AC SG +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFR 59
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNS 180
G +H + + L D + +L +Y G S +RK+F++ + NV W S
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR------NVVSWTS 113
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
++ G G+Q+ VK G
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI---------IVGCF---- 243
E + SLI M G +D +F+ M ERD +SW I I F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 244 -------ECSCFTLSALVDMYSNCN-------------------VLCEARKLFDQYSSWA 277
E + T+S L+ + + + V+C L Y+
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 278 ASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
S N+ WNS+++ +V + ++ +A+ LL + SSG ++ TFTSAL
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC F L HGL+V SG + I+G+ L+ +Y ++G + + + ++P++DV
Sbjct: 354 ACFTPDFFEKGRIL--HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHA 446
VAW+ LI G + A F+ M N + SVL C L RGK +HA
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ V GFE ++ SLI MY KCG++ LF + R++++W ++ +G +E
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT---------------IFTSMKP 551
+ +M + ++ +F LSA ++EE IF +
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 591
Query: 552 EYG-----------LEP----HLEHYYCMVDLLGQAGCFDD---AEQLIAEMPFKPDKTI 593
Y L P L + ++ LG+ G F++ + EM KP
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651
Query: 594 WASMLKAC 601
+ S+L AC
Sbjct: 652 FVSLLTAC 659
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 210/730 (28%), Positives = 340/730 (46%), Gaps = 107/730 (14%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D + N +L+ Y+ ++ A LFD M ++VSW +V+ Y ++ L+ M
Sbjct: 123 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 182
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G V P+ ++ +LK+CS +L LG +H + LE D + L+DMY KC S
Sbjct: 183 ARRG-VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 241
Query: 156 LTRKLFDQYS----NWA-------------------------------------ASAYGN 174
L L Y NW ASA+ +
Sbjct: 242 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 301
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD--------------- 219
A S L+ G+Q+HA +K F + V T+++D+Y K + D
Sbjct: 302 CAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 360
Query: 220 ----------------GLALFNFMPER----DVVSWTGIIVGCFECS---------CFTL 250
+ LF FM DVVS +G+ C E C +
Sbjct: 361 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 420
Query: 251 -----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+A++D+Y C L EA +F + WN++I+ N
Sbjct: 421 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ------KDSVSWNAIIAALEQNGH 474
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
++ I + + GM D +T+ S LKAC L + + L VH ++ SG D V
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLE--YGLMVHDKVIKSGLGSDAFVA 532
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S ++D+Y + G + A +L R+ + VV+W+ ++ G + + + A F +M++
Sbjct: 533 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F ++VL C+ LA++ GKQ+H +K+ ++ ++L+DMY KCG++ D L +
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + +RD VSW +I G +G EA+ F+ M + + PN TF+ VL AC H GL
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
++ F M Y LEP LEH+ CMVD+LG++ +A + I MPF+ D IW ++L
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
C+ + ++ + A +L P+D S Y++LSNVYA G W +S+ R+ K+ +K+
Sbjct: 773 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 832
Query: 659 AGMSWIEVSS 668
G SWIEV S
Sbjct: 833 PGCSWIEVQS 842
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 238/588 (40%), Gaps = 110/588 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G +H +K GL D+ TG+ L+ MY SL+DA F M +N
Sbjct: 198 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNW 257
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
VSW + N++ + L+ M L G +P+ Y++ ++C+ L+ GR +
Sbjct: 258 VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFRSCAAMSCLNTGRQL 314
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW--------------AASA 171
H + K D V+ ++D+Y K SLT R+ F N A
Sbjct: 315 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 374
Query: 172 YGNVALWNSM-----------LSG-------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M LSG G+QVH +K GF+ + ++
Sbjct: 375 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAV 434
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------------------------- 240
+D+Y KC + + +F M ++D VSW II
Sbjct: 435 LDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 494
Query: 241 ---GCFECSCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQ 272
G +C L +L VDMY C ++ EA+KL D+
Sbjct: 495 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 554
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
V WN+++SG+ LN+++EEA S + G+ D +TF + L C NL
Sbjct: 555 IGGQ------QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+HG I+ D + S L+D+YA+ G++ +L +F ++ K+D V+W+
Sbjct: 609 ATIE--LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNA 666
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKR 451
+I G HGL A +F M N N +VL+ CS + G + H
Sbjct: 667 MICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 726
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
E + ++D+ + + + MP + D V W ++ C
Sbjct: 727 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 774
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 210/730 (28%), Positives = 341/730 (46%), Gaps = 107/730 (14%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D + N +L+ Y+ ++ A LFD M ++VSW +V+ Y ++ L+ M
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G V P+ ++ +LK+CS +L LG +H + LE D + L+DMY KC S
Sbjct: 141 ARRG-VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199
Query: 156 LTRKLFDQYS----NWA-------------------------------------ASAYGN 174
L L Y NW ASA+ +
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD--------------- 219
A S L+ G+Q+HA +K F + V T+++D+Y K + D
Sbjct: 260 CAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 318
Query: 220 ----------------GLALFNFMPER----DVVSWTGIIVGCFECS---------CFTL 250
+ LF FM DVVS +G+ C E C +
Sbjct: 319 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 378
Query: 251 -----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+A++D+Y C L EA +F + + WN++I+ N
Sbjct: 379 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS------WNAIIAALEQNGH 432
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
++ I + + GM D +T+ S LKAC L + + L VH ++ SG D V
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL--EYGLMVHDKVIKSGLGSDAFVA 490
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S ++D+Y + G + A +L R+ + VV+W+ ++ G + + + A F +M++
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F ++VL C+ LA++ GKQ+H +K+ ++ ++L+DMY KCG++ D L +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + +RD VSW +I G +G EA+ F+ M + + PN TF+ VL AC H GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
++ F M Y LEP LEH+ CMVD+LG++ +A + I MPF+ D IW ++L
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
C+ + ++ + A +L P+D S Y++LSNVYA G W +S+ R+ K+ +K+
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 659 AGMSWIEVSS 668
G SWIEV S
Sbjct: 791 PGCSWIEVQS 800
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 238/588 (40%), Gaps = 110/588 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G +H +K GL D+ TG+ L+ MY SL+DA F M +N
Sbjct: 156 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNW 215
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
VSW + N++ + L+ M L G +P+ Y++ ++C+ L+ GR +
Sbjct: 216 VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFRSCAAMSCLNTGRQL 272
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW--------------AASA 171
H + K D V+ ++D+Y K SLT R+ F N A
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 332
Query: 172 YGNVALWNSM-----------LSG-------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M LSG G+QVH +K GF+ + ++
Sbjct: 333 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAV 392
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------------------------- 240
+D+Y KC + + +F M ++D VSW II
Sbjct: 393 LDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 452
Query: 241 ---GCFECSCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQ 272
G +C L +L VDMY C ++ EA+KL D+
Sbjct: 453 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
V WN+++SG+ LN+++EEA S + G+ D +TF + L C NL
Sbjct: 513 IGGQ------QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+HG I+ D + S L+D+YA+ G++ +L +F ++ K+D V+W+
Sbjct: 567 ATI--ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNA 624
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKR 451
+I G HGL A +F M N N +VL+ CS + G + H
Sbjct: 625 MICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 684
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
E + ++D+ + + + MP + D V W ++ C
Sbjct: 685 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 732
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 213/758 (28%), Positives = 351/758 (46%), Gaps = 105/758 (13%)
Query: 6 IVEALRHCGQRRSI-KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I + CG+ S+ ++G +H + K GL D++ +L +Y + ++ + K+F+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+N+VSWT+++ Y+ P I +Y M G V N S V+ +C L D LG
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSCGLLKDESLG 179
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG-- 173
R I ++ + LE + N+L+ M G++ +FDQ S N A+AY
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 174 --------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL 204
N +++LS G+ +H VK GF+
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSW----------------------------- 235
+L+ MY G + +F MP +D++SW
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 236 ------TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
T + CF F +ALV MY + E+R++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Q +V WN++I GY +E ++A+ + G+ + T S L AC
Sbjct: 420 LLQMPRR------DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + R +H IV++G+E D V ++LI +YA+ G++ S+ +LF+ L ++++
Sbjct: 474 LLPGDLLER-GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ HG L M + ++QF S L + LA L G+Q+H V
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K GFE + + DMY KCGEI + + + R + SW +I G++G +E A
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F EM++ +KP +TF+ +L+AC H GLV++ + + ++GLEP +EH C++DLL
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 712
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G++G +AE I++MP KP+ +W S+L +C+ H N AE L PED S YV
Sbjct: 713 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 772
Query: 630 MLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+ SN++AT G W+ + VRK G K +KK SW+++
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 810
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/685 (24%), Positives = 276/685 (40%), Gaps = 139/685 (20%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY F + A LFD M +N VSW TM++ + + M + G ++P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSF 59
Query: 107 MYSAVLKACSLSGDL-DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQ 163
+ ++++ AC SG + G +H + + L D + +L +Y G S +RK+F++
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 164 YSNWAASAYGNVALWNSMLSG--------------------------------------- 184
+ NV W S++ G
Sbjct: 120 MPDR------NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 173
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI- 238
G+Q+ VK G E + SLI M G +D +F+ M ERD +SW I
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 239 --------IVGCF-----------ECSCFTLSALVDMYSNCN------------------ 261
I F E + T+S L+ + + +
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 262 -VLCEARKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHI 310
V+C L Y+ S N+ WNS+++ +V + ++ +A+ LL +
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
SSG ++ TFTSAL AC F L HGL+V SG + I+G+ L+ +Y ++G
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRIL--HGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ + + ++P++DVVAW+ LI G + A F+ M N + SVL
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 431 VCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C L RGK +HA+ V GFE ++ SLI MY KCG++ LF + R+++
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT----- 544
+W ++ +G +E + +M + ++ +F LSA ++EE
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 545 ----------IFTSMKPEYG-----------LEP----HLEHYYCMVDLLGQAGCFDD-- 577
IF + Y L P L + ++ LG+ G F++
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 578 -AEQLIAEMPFKPDKTIWASMLKAC 601
+ EM KP + S+L AC
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTAC 676
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 325/588 (55%), Gaps = 45/588 (7%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
++ G + +Y+++L+ C+ + G IH + + LE+D + N+LL +Y K G+
Sbjct: 50 IDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT 109
Query: 156 ---LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-----CVKRGFEKEDVT 203
TRK+FD +V W SM+SG GK +++ + G E T
Sbjct: 110 DFPETRKVFD------GLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 163
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-CFECSCFTLSALVDMYSNCNV 262
L+++I C E+ D L L + G+++G F+ + SAL+DM+
Sbjct: 164 LSAVIK---ACSELGD-LKLGRI--------FHGVVLGRGFDSNYVIASALIDMHGRNCA 211
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYT 321
L +AR+LFD+ A W S+IS N+ +EA+ S GMC D +T
Sbjct: 212 LDDARQLFDELLEPDA------ICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFT 265
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F + L AC NL +VH ++T+G+ + +V S+L+D+Y + G+V + +F R
Sbjct: 266 FGTVLTACGNLGRLKQ--GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR 323
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P K+ V+WS L+ G ++G +FR M + V+ + ++L+ C+ LA++R+G
Sbjct: 324 MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQG 379
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K+VH +++G ++ I ++L+D+Y KCG I+ +F MP R++++W +I G QN
Sbjct: 380 KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 439
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
GR +EA+ F +M++ +KP+ I+F+G+L AC H GLV+E F SM +YG++ +EH
Sbjct: 440 GRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH 499
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y CMVDLLG+AG ++AE LI F+ D ++WA++L AC T N ++ IA++++
Sbjct: 500 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 559
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
P+ YV+L+NVY +G W+ ++R+ K G K G SWIE +
Sbjct: 560 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKN 607
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 210/499 (42%), Gaps = 134/499 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEMARKN 68
L+ C + + G +H +IK GL D F GN+LL++Y T + K+FD + K+
Sbjct: 66 LQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKD 125
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SWT+M++ Y +P ++ L+ ML YG VEPN F SAV+KACS GDL LGR+ H
Sbjct: 126 VISWTSMISGYVRVGKPMNSLELFWKMLAYG-VEPNAFTLSAVIKACSELGDLKLGRIFH 184
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA------------ 169
+ + + V+ + L+DM+ + +L R+LFD+ W +
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 244
Query: 170 --------------------------SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
+A GN+ L GK+VHA + GF V
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLG----RLKQGKEVHAKVITTGFCGNVVV 300
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------------------- 241
+SL+DMY KCG + + +F+ MP ++ VSW+ ++ G
Sbjct: 301 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 360
Query: 242 -CF-----------------ECSC-----------FTLSALVDMYSNCNVLCEARKLFDQ 272
CF E C SALVD+Y+ C + A+ +FDQ
Sbjct: 361 YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQ 420
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
N+ WNSMI G+ N + EEA+ + + + G+ D +F L AC
Sbjct: 421 M------PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC--- 471
Query: 333 LNFNSRFALQVHGLIVTSGYEL------DYIVG------SNLIDLYARLGNVKSALELFH 380
H +V G E DY + S ++DL R G ++ A L
Sbjct: 472 ----------SHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIE 521
Query: 381 RLP-KKDVVAWSGLIMGCT 398
+ D W+ L+ CT
Sbjct: 522 TSDFRDDSSLWAALLGACT 540
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 65/452 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + +K G+ H ++ G + + L+ M+ +L+DA +LFDE+ +
Sbjct: 168 IKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDA 227
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ WT++++A T N + A+R + M + P+GF + VL AC G L G+ +H
Sbjct: 228 ICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHA 287
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGN-------- 174
++ + V+ ++L+DMY KCGS+ ++++FD+ +W+A G
Sbjct: 288 KVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKS 347
Query: 175 -VALWNSM--------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
+ ++ M + GK+VH +++G ++ + ++L+D+Y K
Sbjct: 348 VIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAK 407
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCF-----ECSCFTLSALV------DMYSNCNV 262
CG I+ +F+ MP R++++W +I G E + + +V D S +
Sbjct: 408 CGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGI 467
Query: 263 L--CEARKLFDQYSSWAASA---YG---NVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
L C R L D+ + S YG + ++ M+ EEA L I +S
Sbjct: 468 LFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEIL---IETSD 524
Query: 315 MCIDSYTFTSALKACINLLNFN--SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
DS + + L AC N+ R A +V L Y L Y++ L ++Y +G
Sbjct: 525 FRDDSSLWAALLGACTTCTNYEIAERIAKRVMEL--EPDYHLSYVL---LANVYKAVGRW 579
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
AL + + + V G TK+ L S
Sbjct: 580 NDALRIRRLMKDRGVNKMPGKSWIETKNNLGS 611
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I+ K G S A L + + + +S+L+ C+ + + G Q+HA +K G
Sbjct: 31 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 90
Query: 454 EKEDITLTSLIDMYLKCG-EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E + SL+ +Y K G + + +F + +DV+SWT +I G + G+ ++ F
Sbjct: 91 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 150
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M+ ++PN T V+ AC G ++ IF + G + + ++D+ G+
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRN 209
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKA 600
DDA QL E+ +PD W S++ A
Sbjct: 210 CALDDARQLFDEL-LEPDAICWTSIISA 236
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 203/666 (30%), Positives = 330/666 (49%), Gaps = 36/666 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+++AL H Q R++ G+++H +II+ G S N L++ YA L AH +F+ +
Sbjct: 19 LLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAII 78
Query: 66 RKNIVSWTTMVTAYTSN---KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
K++VSW +++T Y+ N + ++L+ M + PN + + + KA S
Sbjct: 79 CKDVVSWNSLITGYSQNGGISSSHTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSCT 137
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
+GR H + + D + +L+ MY K G L Y W Y L +
Sbjct: 138 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLC--YKKDVLRRQLK 194
Query: 183 SGGKQVHAFCVKRGFEKE---DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
S + C EKE D T+++ + G + + ++ + +
Sbjct: 195 S------SICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALS 248
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+ALV MYS C L EA K+FD +S N W++M++GY N +
Sbjct: 249 -----------NALVTMYSKCESLNEACKMFD------SSGDRNSITWSAMVTGYSQNGE 291
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+ EAI L S + S+G+ YT L AC ++ Q+H ++ G+E
Sbjct: 292 SLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVE--GKQLHSFLLKLGFERHLFAT 349
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+D+YA+ G + A + F L ++DV W+ LI G ++ N A +L+R M +
Sbjct: 350 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 409
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N ++SVLK CS LA+L GKQVH +K GF E ++L MY KCG ++DG +
Sbjct: 410 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLV 469
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ P +DVVSW +I G NG+ EA+ F+EM+ +P+++TF+ ++SAC H G V
Sbjct: 470 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFV 529
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E W+ F M ++GL+P ++HY CMVD+L +AG + ++ I +W +L
Sbjct: 530 ERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLS 589
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
AC+ H N +L E+L++ + S YV L+ +Y LG + +V K + G K+
Sbjct: 590 ACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTNGVSKE 649
Query: 659 AGMSWI 664
G SWI
Sbjct: 650 VGCSWI 655
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 210/730 (28%), Positives = 341/730 (46%), Gaps = 107/730 (14%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D + N +L+ Y+ ++ A LFD M ++VSW +V+ Y ++ L+ M
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G V P+ ++ +LK+CS +L LG +H + LE D + L+DMY KC S
Sbjct: 141 ARRG-VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199
Query: 156 LTRKLFDQYS----NWA-------------------------------------ASAYGN 174
L L Y NW ASA+ +
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD--------------- 219
A S L+ G+Q+HA +K F + V T+++D+Y K + D
Sbjct: 260 CAAM-SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVET 318
Query: 220 ----------------GLALFNFMPER----DVVSWTGIIVGCFECS---------CFTL 250
+ LF FM DVVS +G+ C E C +
Sbjct: 319 SNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAI 378
Query: 251 -----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+A++D+Y C L EA +F + + WN++I+ N
Sbjct: 379 KSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS------WNAIIAALEQNGH 432
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
++ I + + GM D +T+ S LKAC L + + L VH ++ SG D V
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL--EYGLMVHDKVIKSGLGSDAFVA 490
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S ++D+Y + G + A +L R+ + VV+W+ ++ G + + + A F +M++
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F ++VL C+ LA++ GKQ+H +K+ ++ ++L+DMY KCG++ D L +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + +RD VSW +I G +G EA+ F+ M + + PN TF+ VL AC H GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
++ F M Y LEP LEH+ CMVD+LG++ +A + I MPF+ D IW ++L
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
C+ + ++ + A +L P+D S Y++LSNVYA G W +S+ R+ K+ +K+
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 659 AGMSWIEVSS 668
G SWIEV S
Sbjct: 791 PGCSWIEVQS 800
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 238/588 (40%), Gaps = 110/588 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G +H +K GL D+ TG+ L+ MY SL+DA F M +N
Sbjct: 156 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNW 215
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
VSW + N++ + L+ M L G +P+ Y++ ++C+ L+ GR +
Sbjct: 216 VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS---YASAFRSCAAMSCLNTGRQL 272
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW--------------AASA 171
H + K D V+ ++D+Y K SLT R+ F N A
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLG 332
Query: 172 YGNVALWNSM-----------LSG-------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M LSG G+QVH +K GF+ + ++
Sbjct: 333 IEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAV 392
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------------------------- 240
+D+Y KC + + +F M ++D VSW II
Sbjct: 393 LDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 452
Query: 241 ---GCFECSCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQ 272
G +C L +L VDMY C ++ EA+KL D+
Sbjct: 453 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
V WN+++SG+ LN+++EEA S + G+ D +TF + L C NL
Sbjct: 513 IGGQ------QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q+HG I+ D + S L+D+YA+ G++ +L +F ++ K+D V+W+
Sbjct: 567 ATI--ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNA 624
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKR 451
+I G HGL A +F M N N +VL+ CS + G + H
Sbjct: 625 MICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY 684
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
E + ++D+ + + + MP + D V W ++ C
Sbjct: 685 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 732
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 150/608 (24%), Positives = 258/608 (42%), Gaps = 82/608 (13%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--L 160
PN F+ + +L+ + R + + + R DTV NT+L Y G ++ L
Sbjct: 50 PNAFVSNCLLQMYARCAGAACARRVFDAMPRR----DTVSWNTMLTAYSHAGDISTAVAL 105
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSLIDMY 211
FD + +V WN+++SG Q F +RG + T L+
Sbjct: 106 FDGMPD------PDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSC 159
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
E+ G+ + + TG+ E T SALVDMY C R L D
Sbjct: 160 SALEELSLGVQVHALAVK------TGL-----EIDVRTGSALVDMYGKC------RSLDD 202
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ N W + I+G V NEQ + L + G+ + ++ SA ++C
Sbjct: 203 ALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ N+ Q+H + + + D +VG+ ++D+YA+ ++ A F LP V +
Sbjct: 263 MSCLNT--GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 320
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+++G + GL A LF+ MI S+ + +S V C+ +G+QVH +K
Sbjct: 321 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
GF+ + +++D+Y KC + + +F+ M ++D VSW II QNG + I +F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 512 QEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
EM++ +KP++ T+ VL AC GL+ I + + + + + YC
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500
Query: 567 DLLGQAGCFDD---AEQLIA-------------------------EMPFKPDKTIWASML 598
++ +A D +Q+++ +M KPD +A++L
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYATLG-MWDSLSKVRKAGKKLG 655
C +L I Q++ D +Y+ L ++YA G M DSL K
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLD-DEYISSTLVDMYAKCGDMPDSLLVFEKV----- 614
Query: 656 EKKAGMSW 663
EK+ +SW
Sbjct: 615 EKRDFVSW 622
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 214/763 (28%), Positives = 360/763 (47%), Gaps = 127/763 (16%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ +G+ +H + K GL Q N L+++Y+ + DA ++FD M ++ +SW +M+
Sbjct: 219 SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIG 278
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
SN A+ L++ M G+ E + +VL AC+ G +G+ +H + L
Sbjct: 279 GCFSNGWHGTAVDLFSKMWSQGT-EISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLL 337
Query: 138 Y----------DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ D L + L+ MYVKCG + R++FD A S+ GNV +WN ++ G
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFD-----AMSSKGNVHVWNLIMGGY 392
Query: 186 KQV--------------------------------------------HAFCVKRGFEKED 201
+V H + VK GF +
Sbjct: 393 AKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQC 452
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMP--------------------------------- 228
+LI Y K I D + +FN MP
Sbjct: 453 AVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQ 512
Query: 229 --ERDVVSWTGIIVGCFECSCF--------------------TLSALVDMYSNCNVLCEA 266
E D V+ ++ C + + +AL+DMYSNC+
Sbjct: 513 GQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQST 572
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++F NV W +MI+ Y+ ++ LL + G+ D + TSAL
Sbjct: 573 NQIFRSMGQ------KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSAL 626
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
A + + + VHG + +G E V + L+++Y + NV+ A +F R+ KD
Sbjct: 627 HAFAG--DESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKD 684
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V++W+ LI G +++ + ++ LF DM+ + N ++ +L + ++SL RG+++HA
Sbjct: 685 VISWNTLIGGYSRNNFPNESFSLFSDMLLQFRP-NAVTMTCILPAAASISSLERGREIHA 743
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ ++RGF ++ +L+DMY+KCG + LF + +++++SWT +I G G +G K
Sbjct: 744 YALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKH 803
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
AIA F++M S ++P+ +F +L AC H+GL E F +M+ EY +EP L+HY C+V
Sbjct: 804 AIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIV 863
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLL + G +A + I MP +PD +IW S+L C H N KL +A+++ PE+
Sbjct: 864 DLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTG 923
Query: 627 KYVMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEVSS 668
YV+L+N+YA W+++ K++ K G + + G SWIEV S
Sbjct: 924 YYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRS 966
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 254/549 (46%), Gaps = 32/549 (5%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS----QDIFTGNNLLSMYADFTSLND 56
+D+R ++ CG+ RS++ K H I + + G L+ Y L +
Sbjct: 95 VDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGE 154
Query: 57 AHKLFDEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
A +FD M + ++ WT++++AY A+ L+ M G V P+ S VLK
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCG-VSPDAHAVSCVLKC 213
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
S G L G +IH + + L + N L+ +Y +CG + ++FD A +
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAIS- 272
Query: 173 GNVALWNSMLSG-------GKQVHAFCV--KRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
WNSM+ G G V F +G E VT+ S++ G G A+
Sbjct: 273 -----WNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAV 327
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+ + ++ + + + S LV MY C + AR++FD A S+ GN
Sbjct: 328 HGYSVKSGLLWGLDSVQSGIDDAALG-SKLVFMYVKCGDMASARRVFD-----AMSSKGN 381
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
V +WN ++ GY + EE+++L +H G+ D + + LK CI L+ +R L
Sbjct: 382 VHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLK-CITCLSC-ARDGLVA 439
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG IV G+ V + LI YA+ + A+ +F+R+P++D ++W+ +I GC+ +GLN
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
S A LF M Q+++ + SVL C+ G+ VH + VK G E +L
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANAL 559
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+DMY C + +F+ M +++VVSWT +I + G + QEM+ ++P+
Sbjct: 560 LDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDV 619
Query: 524 ITFLGVLSA 532
L A
Sbjct: 620 FAVTSALHA 628
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 182/452 (40%), Gaps = 118/452 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C Q R G+ +H +K GL + N LL MY++ + +++
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +KN+VSWT M+T+Y + L M+ G + P+ F ++ L A +
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG-IRPDVFAVTSALHAFAGDES 634
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L G+ +H R +E + N L++MYVKC ++ R +FD+ +N +V W
Sbjct: 635 LKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN------KDVISW 688
Query: 179 NSMLSG-------------------------------------------GKQVHAFCVKR 195
N+++ G G+++HA+ ++R
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRR 748
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
GF ++ +L+DMY+KCG + LF+ + +++++SWT +I G
Sbjct: 749 GFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG-------------- 794
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y ++ + AI L + SG+
Sbjct: 795 --------------------------------------YGMHGFGKHAIALFEQMRGSGI 816
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARL 369
D+ +F++ L AC + L G + +Y + L +DL +R
Sbjct: 817 EPDAASFSAILYACCH-------SGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRT 869
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G++K ALE +P + D W L+ GC H
Sbjct: 870 GDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 29/369 (7%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
LV Y C L EAR +FD AA +V +W S++S Y +EA++L +
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAA----DVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D++ + LK C++ L + + +HGL+ G V + LI +Y+R G +
Sbjct: 198 CGVSPDAHAVSCVLK-CVSSLGSLTEGEV-IHGLLEKLGLGQACAVANALIAVYSRCGRM 255
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F + +D ++W+ +I GC +G + A LF M + +++ + SVL C
Sbjct: 256 EDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC 315
Query: 433 SCLASLRRGKQVHAFCVKRGF---------EKEDITLTS-LIDMYLKCGEIDDGLALFKF 482
+ L GK VH + VK G +D L S L+ MY+KCG++ +F
Sbjct: 316 AGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDA 375
Query: 483 MPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS-----ACRHA 536
M + +V W I+ G + G +E+++ F +M + + P+E +L +C
Sbjct: 376 MSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD 435
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV + + + + L +Y +++G DA + MP + D W S
Sbjct: 436 GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIG------DAVLVFNRMP-RQDTISWNS 488
Query: 597 MLKACETHN 605
++ C ++
Sbjct: 489 VISGCSSNG 497
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKK--DVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
++G L+ Y + G++ A +F +P + DV W+ L+ K G A LFR M
Sbjct: 137 VLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQ 196
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ +S VLK S L SL G+ +H K G + +LI +Y +CG ++
Sbjct: 197 CCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRME 256
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F M RD +SW +I GC NG A+ F +M + + +T L VL AC
Sbjct: 257 DAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC- 315
Query: 535 HAGL 538
AGL
Sbjct: 316 -AGL 318
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 222/753 (29%), Positives = 345/753 (45%), Gaps = 109/753 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +G ++H I L D+F G L+ MY L++A K+FD+M K++
Sbjct: 134 LKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDV 193
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW M++ + + P A+ ++ M VEP+ + A S D+D + IH
Sbjct: 194 ASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHG 253
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQY-----SNWAASAYG--------- 173
+ R + V+ N+L+DMY KCG L ++FDQ +WA G
Sbjct: 254 YVVRRCVF--GVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFE 311
Query: 174 ----------------NVALWNSMLSG--------GKQVHAFCVKRGFEKEDVTLTSLID 209
+++ NS+L+ GK+VH + ++ G + V T ++
Sbjct: 312 VLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVS 371
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTG-------------------------------- 237
MY KCGE+ F + RD+V W+
Sbjct: 372 MYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTI 431
Query: 238 ---IIVGCFECS---------CFTLSA-----------LVDMYSNCNVLCEARKLFDQYS 274
++ C E S C+ + A LV MY+ C A LF++
Sbjct: 432 LSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMH 491
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
Y +V WN++I+G+ A+ + + SG+ DS T S L AC L +
Sbjct: 492 ------YKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDD 545
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSG 392
+ HG I+ +G E + V LID+YA+ G++ +A LFH L K KD V+W+
Sbjct: 546 L--YLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFH-LNKHVKDEVSWNV 602
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G +G + A F M + N ++L S L+ LR HA ++ G
Sbjct: 603 MIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMG 662
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F + SLIDMY K G++ F M + +SW ++ G +G+ + A+A F
Sbjct: 663 FISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFS 722
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M ++ + + ++++ VLSACRHAGL++E IF SM ++ LEP +EHY CMVDLLG A
Sbjct: 723 LMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCA 782
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G FD+ LI +MP +PD +W ++L AC+ H+N KL I LL P + Y++LS
Sbjct: 783 GLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLS 842
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
++YA G W + R G KK G SW+
Sbjct: 843 DIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 265/575 (46%), Gaps = 55/575 (9%)
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + +++ W +++ AY+ AI+ Y M Y +EP+ + ++ VLKAC+ + D
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTM-SYMGLEPDKYTFTFVLKACTGALDF 143
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
G IH+ I +LE D + L+DMY K G L RK+FD+ +VA WN
Sbjct: 144 HEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPG------KDVASWN 197
Query: 180 SMLSGGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+M+SG Q C ++ G E + V++ +L + ++D ++ ++
Sbjct: 198 AMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR 257
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
R V G++ ++L+DMYS C + A ++FDQ W W +
Sbjct: 258 RCVF---GVVS----------NSLIDMYSKCGEVKLAHQIFDQM--WVKDDIS----WAT 298
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
M++GYV + E + LL + + ++ + +++ A + +VH +
Sbjct: 299 MMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEK--GKEVHNYALQ 356
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G D +V + ++ +YA+ G +K A E F L +D+V WS + + G A +
Sbjct: 357 LGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSI 416
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F++M + ++ I+SS++ C+ ++S R GK +H + +K + T+L+ MY +
Sbjct: 417 FQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTR 476
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
C + LF M +DVV+W +I G + G + A+ F + S ++P+ T + +
Sbjct: 477 CKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSL 536
Query: 530 LSACRHAGLVEEAW--TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
LSAC L+++ + F + G+E + ++D+ + G AE L
Sbjct: 537 LSAC---ALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKH 593
Query: 588 KPDKTIWASML----------KACETHNNTKLVSI 612
D+ W M+ +A T N KL S+
Sbjct: 594 VKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESV 628
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 211/545 (38%), Gaps = 115/545 (21%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ +V ++ + R +++GK +H ++ G++ DI ++SMYA L A +
Sbjct: 326 MNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEF 385
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F + +++V W+ ++A P A+ ++ M G ++P+ + S+++ AC+
Sbjct: 386 FLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEG-LKPDKTILSSLVSACAEISS 444
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
LG+++H + + + D + TL+ MY +C S LF++ Y +V W
Sbjct: 445 SRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMH------YKDVVAW 498
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N++++G G H +K
Sbjct: 499 NTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIK 558
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVGCFECSC------ 247
G E E +LIDMY KCG + LF+ +D VSW +I G C
Sbjct: 559 NGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAIS 618
Query: 248 --------------FTLSALVDMYSNCNVLCEA-------------------RKLFDQYS 274
T ++ S ++L EA L D Y+
Sbjct: 619 TFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYA 678
Query: 275 SWAASAY-----------GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+Y G ++ WN+M+SGY ++ Q E A+ L S + + + +DS ++
Sbjct: 679 KSGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYI 737
Query: 324 SALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFH 380
S L AC + L R Q +T + L+ + + ++DL G L L
Sbjct: 738 SVLSACRHAGLIQEGRNIFQS----MTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLID 793
Query: 381 RLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN--SNQDVNQFIISSVLKVCSCLAS 437
++P + D W L+ C H L + ++ V+ ++S + C
Sbjct: 794 KMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWID 853
Query: 438 LRRGK 442
RR +
Sbjct: 854 ARRTR 858
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 27/299 (9%)
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ ++ARL V+ + + ++ W+ LI ++ L A ++ M + +
Sbjct: 68 LLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPD 126
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
++ + VLK C+ G +H R E + T L+DMY K G +D+ +F
Sbjct: 127 KYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFD 186
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVE 540
MP +DV SW +I G Q+ EA+ FQ M ++ ++P+ ++ L + A V+
Sbjct: 187 KMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVD 246
Query: 541 EAWTI--FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+I + + +G+ + ++D+ + G A Q+ +M K D + WA+M+
Sbjct: 247 SCKSIHGYVVRRCVFGVVSN-----SLIDMYSKCGEVKLAHQIFDQMWVKDDIS-WATMM 300
Query: 599 -----KAC------------ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
C H +S++ L AT D K + N LGM
Sbjct: 301 AGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGM 359
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 342/632 (54%), Gaps = 66/632 (10%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++VSW+ +++ Y +N++ AI + MLE G PN + ++ V +ACS ++ LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECG-FYPNEYCFTGVFRACSNKENISLGK 62
Query: 126 LIHERITREK-LEYDTVLMNTLLDMYVKC-GSLTR--KLFDQYSNWAASAYGNVALWNSM 181
+I + + E D + L+DM+VK G L K+FD+ + NV W M
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR------NVVTWTLM 116
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
++ +Q+ GF ++ V L +DM L ++P+R +S G++
Sbjct: 117 ITRFQQL-------GFSRDAVDL--FLDMVLS-----------GYVPDRFTLS--GVVSA 154
Query: 242 CFECSCFTLS--------------------ALVDMYSNC---NVLCEARKLFDQYSSWAA 278
C E +L +LVDMY+ C + +ARK+FD+
Sbjct: 155 CAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM----- 209
Query: 279 SAYGNVALWNSMISGYVLNEQ-NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
NV W ++I+GYV + + EAI L + + + +TF+S LKAC NL +
Sbjct: 210 -PVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDI-- 266
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
QV+ L+V VG++LI +Y+R GN+++A + F L +K++V+++ ++
Sbjct: 267 WLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAY 326
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
K + A+ LF ++ + VN F +S+L S + ++ +G+Q+H+ +K GF+
Sbjct: 327 AKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNL 386
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI MY +CG I+ +F M + +V+SWT +I G ++G A A+ F +M+++
Sbjct: 387 HICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEA 446
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ PNE+T++ VLSAC H GL+ E F SMK E+G+ P +EHY C+VDLLG++G ++
Sbjct: 447 GVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEE 506
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A +L+ MPFK D + + L AC H N L AE +L P DP+ Y++LSN++A+
Sbjct: 507 AMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHAS 566
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
G W+ ++++RK K+ K+AG SWIEV +
Sbjct: 567 AGQWEEVAEIRKKMKERNLTKEAGCSWIEVEN 598
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 145/591 (24%), Positives = 246/591 (41%), Gaps = 108/591 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTS-LNDAHKLFDEMARK 67
R C + +I GK + ++K G D+ G L+ M+ L A+K+FD M +
Sbjct: 49 FRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR 108
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+V+WT M+T + A+ L+ M+ G V P+ F S V+ AC+ G L LGR
Sbjct: 109 NVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSLGRQF 167
Query: 128 HERITREKLEYDTVLMNTLLDMYVKC---GSL--TRKLFDQYS-----NWAASAYGNVA- 176
H + + L+ D + +L+DMY KC GS+ RK+FD+ +W A G V
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227
Query: 177 ---------LWNSMLSG------------------------GKQVHAFCVKRGFEKEDVT 203
L+ M+ G G+QV+A VK +
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
SLI MY +CG +++ F+ + E+++VS+ I+
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIV------------------------ 323
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ Y + +EEA L + I +G ++++TF
Sbjct: 324 ----------------------------NAYAKSLNSEEAFELFNEIEGAGTGVNAFTFA 355
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L ++ Q+H I+ SG++ + + + LI +Y+R GN+++A ++F+ +
Sbjct: 356 SLLSGASSIGAIGK--GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG 413
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-K 442
+V++W+ +I G KHG + A F M+ + N+ +VL CS + + G K
Sbjct: 414 DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK 473
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
+ V+ G ++D+ + G +++ + L MP + D + + C +
Sbjct: 474 HFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVH 533
Query: 502 GRAKEAIAYFQEMI--QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
G + EMI Q P L L A AG EE I MK
Sbjct: 534 GNMDLG-KHAAEMILEQDPHDPAAYILLSNLHA--SAGQWEEVAEIRKKMK 581
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 211/670 (31%), Positives = 342/670 (51%), Gaps = 44/670 (6%)
Query: 16 RRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
++S+K+G+ LH IIK LS + NNL+ YA L+ A +F+ + KN+VS+
Sbjct: 20 QKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNC 79
Query: 75 MVTAYTSN--KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL-GRLIHERI 131
++ + N K N+ + L+ M+ ++ P+ + V A +L+ + R +H
Sbjct: 80 LIHGLSHNGSKGSNFVLELFRRMIA-NNILPDAHTFPGVFTAAALNLGCNFDARQVHVLG 138
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--GKQ 187
+ D + ++L++ Y K G + RKLFD+ N+ W +M+SG KQ
Sbjct: 139 IKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPER------NLVSWTTMISGYASKQ 192
Query: 188 VH-----AFCVKRGFEKE--DVTLTSLIDMYLKCGE-IDDGLALFNFMPERDVVSWTGII 239
+ F + R E + TS++ L C E +D G + + + V+ + +
Sbjct: 193 MAKEALGVFGLMRLVEGNLNEFVFTSVLSA-LVCPEFVDSGKQVHCVVVKNGVLEFVSV- 250
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
L+ALV MY+ C L + LF+ S N W+++I+GY
Sbjct: 251 ----------LNALVTMYAKCGNLNYSLMLFEMCSD------KNAITWSALITGYSQAGD 294
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+ +A+ L S +H +G +T LKAC ++ Q HG ++ SGYE
Sbjct: 295 SHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEE--GKQTHGYLLKSGYETQIYTA 352
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+D+YA+ G A + F L + D+V W+ +I G ++G N A ++ M
Sbjct: 353 TALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKIL 412
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N+ ++SVLK CS LA+L +GKQ+HA +K G E ++L MY KCG +++G+ +
Sbjct: 413 PNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLI 472
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ M +RD+VSW +I G QNG +EA+ F+EM KP+ ITF+ VLSAC H G+V
Sbjct: 473 FRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIV 532
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ W F M E+ L P +EHY CMVD+L +AG ++A++ I +W +L
Sbjct: 533 KRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLP 592
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
AC H N +L + E+L+ + S YV+LS++Y +G + +VR+ K G K+
Sbjct: 593 ACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKE 652
Query: 659 AGMSWIEVSS 668
G SWIE+ S
Sbjct: 653 TGCSWIELKS 662
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 212/683 (31%), Positives = 354/683 (51%), Gaps = 44/683 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++V++ G+ + GK +H +IK +F NNLL+MY A KL
Sbjct: 60 VDYVKLVQSATKTGK---LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD+M++ NIV++ ++++ Y + + L++ G ++ + + + L ACS SG+
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLG-LKLDKYTCAGALTACSQSGN 175
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L G++IH I L VL N+L+DMY KCG + R LFD + W
Sbjct: 176 LSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVS------W 229
Query: 179 NSMLSG----GKQVHAFCVKRGFEKEDVTL-TSLIDMYLK-CGEIDDGLALFNFMPERDV 232
NS+++G GK + + + + T + LK C +G +F M
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 289
Query: 233 VSW---TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ ++VG +AL+DMY+ L +A ++FDQ NV ++N+
Sbjct: 290 IKLGLHLDVVVG---------TALLDMYAKTGSLDDAIQIFDQMVD------KNVVMYNA 334
Query: 290 MISGYVLNEQNEE-----AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
M++G + E E+ A+ L + S G+ +T++S LKACI + +F +FA QVH
Sbjct: 335 MMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDF--KFAKQVH 392
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
L+ +G D +GS LIDLY+ LG++ AL F+ + +V + +I G ++G
Sbjct: 393 ALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFE 452
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF +++ + ++FI S+++ C+ + LR G+Q+ K G + I S I
Sbjct: 453 SALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQI 512
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY K G++ F+ M D+VSW+ +I Q+G A EA+ +F+ M ++PN
Sbjct: 513 WMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHF 572
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
FLGVL AC H GLVEE F +M+ +Y ++ H++H C+VDLLG+AG DAE LI
Sbjct: 573 AFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILR 632
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
+ F+ + +W ++L AC H +T +A++++ P + YV+L N+Y G +
Sbjct: 633 LGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAA 692
Query: 645 SKVRK-AGKKLGEKKAGMSWIEV 666
SKVR ++ +K+ G+SWI++
Sbjct: 693 SKVRTLMEERRIKKEPGLSWIQI 715
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 215/759 (28%), Positives = 351/759 (46%), Gaps = 121/759 (15%)
Query: 16 RRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ QG +H + G D F LL MY + DA LFD M+ + + SW
Sbjct: 71 KKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWN 130
Query: 74 TMVTAYTSNKRPNWAIRLYNHM-LEYGS-VEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
++ AY S+ A+ +Y M L S V P+G ++VLKA + GD G +H
Sbjct: 131 ALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLA 190
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ L+ T + N L+ MY KCG L ++F+ + +VA WNSM+SG
Sbjct: 191 VKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGR-----DVASWNSMISGCLQNG 245
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G+++HA +K G E ++
Sbjct: 246 MFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEV-NIQCN 304
Query: 206 SLIDMYLKCGEIDDGLALF-------------------------------------NFMP 228
+L+ MY KCG +D L +F F P
Sbjct: 305 ALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQP 364
Query: 229 ER-------DVVSWTGIIVGCFECSCFTL-----------SALVDMYSNCNVLCEARKLF 270
+ V G ++ E + + + L+DMY C + + +F
Sbjct: 365 DHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVF 424
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ + W ++I+ Y + ++ EA+ + G+ +D S L+AC
Sbjct: 425 DRMR------IKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
L A Q+H + +G LD +V + +ID+Y G V +L++F + +KD+V W
Sbjct: 479 GLETI--LLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTW 535
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I GL + A +LF +M +++ + + S+L L+SL +GK+VH F ++
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
R F E+ ++SL+DMY CG + L +F + +D+V WT +I G +G K+AI
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ M+Q+ + P+ ++FL +L AC H+ LV E M Y LEP EHY C+VDLLG
Sbjct: 656 FKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLG 715
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
++G ++A + I MP KP +W S+L AC H N +L + A +LL P++P YV+
Sbjct: 716 RSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVL 775
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+SNV+A +G W++ +VR + G K SWIE+ +
Sbjct: 776 VSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGN 814
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 339/662 (51%), Gaps = 38/662 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+H G +S+ K LH +I GL S DI + L++ YA +++A KLFDE+ ++
Sbjct: 28 LKHYGAAQSLTSTKQLHAHLITSGLLSIDIRS--VLVATYAHCGYVHNARKLFDELRQRG 85
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ + M+ Y + A++++ ML P+ + Y V+KACS ++ GR++H
Sbjct: 86 TLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLH 145
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
K ++N+LL MY+ CG + RK+FD A +V WN+M++G
Sbjct: 146 GLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFD------AMKEKSVVSWNTMING-- 197
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP------ERDVVSWT-GII 239
K GF T + + + G DG ++ + +P E +V G++
Sbjct: 198 -----YFKNGFAN---TALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLV 249
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+ALVDMY+ C + EAR +FD +V W SMI+GY+LN
Sbjct: 250 EEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVER------DVVSWTSMINGYILNGD 303
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+ A++L + G+ +S T L AC +L N L HG ++ + V
Sbjct: 304 AKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCL--HGWVMKQRLYSEVAVE 361
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++LID+YA+ + + +F R +K V W+ L+ GC + L + A LF+ M+ +
Sbjct: 362 TSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVE 421
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+N +S+L LA L+ ++++ ++ GF TSLID+Y KCG ++ +
Sbjct: 422 INAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKI 481
Query: 480 FKFMPE--RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F +P +D+ W+ II G G +G + A++ F++M+QS +KPN++TF VL +C HAG
Sbjct: 482 FNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAG 541
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+V++ +F M ++ P+ +HY CMVDLLG+AG D+A LI MPF P +W ++
Sbjct: 542 MVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGAL 601
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC H N +L + A L P + YV+L+ +YA LG W+ VR+ +G +
Sbjct: 602 LGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLR 661
Query: 658 KA 659
KA
Sbjct: 662 KA 663
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+LK SL KQ+HA + G DI + L+ Y CG + + LF + +R
Sbjct: 26 SLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIR-SVLVATYAHCGYVHNARKLFDELRQR 84
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSACRHAGLVE 540
+ + +I G EA+ F EM+ S+ P+ T+ V+ AC LVE
Sbjct: 85 GTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVE 139
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 338/655 (51%), Gaps = 30/655 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK + R+IK G ++D+F +++ +YA + +A ++F ++ ++
Sbjct: 80 LAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSV 138
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++ YT + A+ ++ M G VE N ++V+ AC + +H
Sbjct: 139 VSWTVMLSGYTKSNDAFSALEIFREMRHSG-VEINSCTVTSVISACGRPSMVCEASQVHA 197
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVAL--WNSMLSGG 185
+ + DT + L+ M K G +L+ ++F+ + NV + ++ G
Sbjct: 198 WVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPG 257
Query: 186 KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
K + F ++ G ++ ++ SL+ + L C ++ G + ++ + ++ + VG
Sbjct: 258 KAIRLFTRMLQEGLNPDEFSVCSLLSV-LDC--LNLGKQVHSYTLKSGLI--LDLTVG-- 310
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S+L MYS C L E+ LF + + + A W SMISG+ EA
Sbjct: 311 -------SSLFTMYSKCGSLEESYSLFQEI------PFKDNACWASMISGFNEYGYLREA 357
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
I L S + G D T + L C +L + + ++HG + +G + +GS L+
Sbjct: 358 IGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPR--SKEIHGYTLRAGIDRGMPLGSALV 415
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+ Y++ G++K A +++ RLP+ D V+ S LI G ++HGL +LLFRDM+ S ++ +
Sbjct: 416 NTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSY 475
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
ISS+LK G QVHA+ K G E +SL+ MY K G I+D F +
Sbjct: 476 AISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQI 535
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
D+++WT +I Q+G+A EA+ + M + KP+++TF+GVLSAC H GLVEE +
Sbjct: 536 NGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGY 595
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
SM +YG+EP HY CMVD LG++G +AE I P KPD +W ++L AC+
Sbjct: 596 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKI 655
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
+ + +L + A++ + P D YV LSN+ A +G WD + + RK K G +K
Sbjct: 656 YGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQK 710
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 141/624 (22%), Positives = 256/624 (41%), Gaps = 150/624 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF---D 62
+ + CG+ + + +H + K G D L+SM + +N + ++F D
Sbjct: 176 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLD 235
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++ R+NIV+ MVT+++ NK+P AIRL+ ML+ G + P+ F ++L S+ L+
Sbjct: 236 DIRRQNIVN--VMVTSFSQNKKPGKAIRLFTRMLQEG-LNPDEFSVCSLL---SVLDCLN 289
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
LG+ +H + L D + ++L MY KCGSL + YS + + + A W SM+
Sbjct: 290 LGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLE----ESYSLFQEIPFKDNACWASMI 345
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG K++H + ++ G +
Sbjct: 346 SGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID 405
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ ++L++ Y KCG + +++ +PE D VS + +I G ++ LV
Sbjct: 406 RGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISG------YSQHGLV---- 455
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
++ L + SG +D
Sbjct: 456 ------------------------------------------QDGFLLFRDMVMSGFSMD 473
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
SY +S LKA + L+ S QVH I G + VGS+L+ +Y++ G+++ +
Sbjct: 474 SYAISSILKAAV--LSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKA 531
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F ++ D++AW+ LI +HG + A ++ M ++ VL CS
Sbjct: 532 FSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACS----- 586
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
H V+ G+ L S++ Y PE + ++
Sbjct: 587 ------HGGLVEEGY----FHLNSMVKDY-------------GIEPENR--HYVCMVDAL 621
Query: 499 GQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G++GR +EA + I +R +KP+ + + +L+AC+ G VE + K LEP
Sbjct: 622 GRSGRLREA----ENFINTRPIKPDALVWGTLLAACKIYGDVELGK---LAAKKAIELEP 674
Query: 558 H-LEHYYCMVDLLGQAGCFDDAEQ 580
Y + ++L + G +D+ E+
Sbjct: 675 SDAGAYVSLSNILAEVGEWDEVEE 698
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 190/388 (48%), Gaps = 23/388 (5%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S+L+D +S + + D Y + + NV WN++I+G L QN A+ L H
Sbjct: 11 SSLIDAFS------KNLRFEDAYKVFRDTLSANVYCWNTIIAG-ALRNQNYGAVFDLFHE 63
Query: 311 HSSGMC-IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+G DSYT++S L AC +L RF V ++ G E D V ++++DLYA+
Sbjct: 64 MCNGFQKPDSYTYSSVLAACASLEEL--RFGKVVQARVIKCGAE-DVFVCTSIVDLYAKC 120
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G++ A E+F R+ VV+W+ ++ G TK A +FR+M +S ++N ++SV+
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C + + QVHA+ K GF + +LI M K G+I+ +F+ + +
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQ 240
Query: 490 SWTGIIVGC-GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA--CRHAGLVEEAWTIF 546
+ ++V QN + +AI F M+Q L P+E + +LS C + G ++T+
Sbjct: 241 NIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTL- 299
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ GL L + + + G +++ L E+PFK D WASM+ +
Sbjct: 300 -----KSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFK-DNACWASMISGFNEYGY 353
Query: 607 TK-LVSIIAEQL-LATSPEDPSKYVMLS 632
+ + + +E L TSP++ + +L+
Sbjct: 354 LREAIGLFSEMLDEGTSPDESTLAAVLT 381
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GY +V S+LID +++ + A ++F +V W+ +I G ++ + LF
Sbjct: 2 GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+M N Q + + SSVL C+ L LR GK V A +K G E + TS++D+Y KC
Sbjct: 62 HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKC 120
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G + + +F + VVSWT ++ G ++ A A+ F+EM S ++ N T V+
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180
Query: 531 SACRHAGLVEEAWTI 545
SAC +V EA +
Sbjct: 181 SACGRPSMVCEASQV 195
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD I L+ + G +H I K GL + G++LL+MY+ F S+ D K
Sbjct: 472 MDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKA 531
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F ++ ++++WT ++ +Y + + N A+++Y M E G +P+ + VL ACS G
Sbjct: 532 FSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKG-FKPDKVTFVGVLSACSHGGL 590
Query: 121 LDLG 124
++ G
Sbjct: 591 VEEG 594
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 328/644 (50%), Gaps = 70/644 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D +T N ++S YA+ +L +A KLF+E N ++W+++V+ Y N +R ++ M
Sbjct: 66 RDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM 125
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G +P+ + +VL+ACS L G++IH + +LE + + L+DMY KC
Sbjct: 126 WSDGQ-KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-CVK----RGFEKEDVTLTS 206
L L +Y ++ N W +ML+G G+ + A C K +G E T S
Sbjct: 185 L---LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241
Query: 207 LIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
++ C I + + F + + W+G F + + SALVDMY+ C L
Sbjct: 242 ILT---ACTSI----SAYAFGRQVHGCIIWSG-----FGPNVYVQSALVDMYAKCGDLAS 289
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR + D +V WNSMI G V + EEA+ L +H+ + ID +T+ S
Sbjct: 290 ARMILDTME------IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSV 343
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK+ + N + VH L + +G++ V + L+D+YA+ GN+ AL++F+++ K
Sbjct: 344 LKSLASCKNL--KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DV++W+ L+ G +G + A LF DM + D++QF+++ V C+ L + G+QVH
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A +K SLI MY KCG ++D + + M R+V+SWT IIVG QNG
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG--- 518
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
LVE + F SM+ YG++P + Y CM
Sbjct: 519 --------------------------------LVETGQSYFESMEKVYGIKPASDRYACM 546
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLLG+AG ++AE L+ M +PD TIW S+L AC H N +L + L+ P +
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN+++ G W+ + +R+A K +G ++ G SWIE+ S
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKS 650
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 224/474 (47%), Gaps = 47/474 (9%)
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKE- 200
N LL K G + RKLFDQ Y + WN M+S + R E
Sbjct: 41 NQLLSELSKNGRVDEARKLFDQM------PYRDKYTWNIMISAYANLGNLVEARKLFNET 94
Query: 201 ----DVTLTSLIDMYLKCGEIDDGLALFNFM------PERDVVS------------WTGI 238
+T +SL+ Y K G +GL F+ M P + + TG
Sbjct: 95 PIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGK 154
Query: 239 IVGCF------ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
++ C+ E + F + LVDMYS C L EA LF ++ N W +M++
Sbjct: 155 MIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF-----FSLPDRKNYVQWTAMLT 209
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY N ++ +AI + + GM + +TF S L AC ++ + F QVHG I+ SG+
Sbjct: 210 GYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAY--AFGRQVHGCIIWSGF 267
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+ V S L+D+YA+ G++ SA + + DVV W+ +I+GC HG A +LF
Sbjct: 268 GPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHK 327
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M N + ++ F SVLK + +L+ G+ VH+ +K GF+ +L+DMY K G
Sbjct: 328 MHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGN 387
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ L +F + ++DV+SWT ++ G NG ++A+ F +M +R+ ++ V SA
Sbjct: 388 LSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSA 447
Query: 533 CRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
C ++E + + +K G E+ ++ + + GC +DA ++ M
Sbjct: 448 CAELTVIEFGRQVHANFIKSSAGSLLSAEN--SLITMYAKCGCLEDAIRVXDSM 499
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 143/636 (22%), Positives = 241/636 (37%), Gaps = 152/636 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
LR C + GK +HC IK L +IF L+ MY+ L +A LF + RKN
Sbjct: 141 LRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKN 200
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V WT M+T Y N AI+ + M G +E N F + ++L AC+ GR +H
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQG-MESNHFTFPSILTACTSISAYAFGRQVH 259
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I + + + L+DMY KCG L R + D +V WNSM+ G
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME------IDDVVCWNSMIVGCV 313
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ VH+ +K GF+
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+DMY K G + L +FN + ++DV+SWT ++ G
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTG--------------------- 412
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
YV N +E+A+ L + ++ + +D +
Sbjct: 413 -------------------------------YVHNGFHEKALQLFCDMRTARVDLDQFVV 441
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
AC L F QVH + S ++LI +YA+ G ++ A+ + +
Sbjct: 442 ACVFSACAELTVI--EFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSM 499
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++V++W+ +I+G ++GL F M +
Sbjct: 500 ETRNVISWTAIIVGYAQNGLVETGQSYFESM----------------------------E 531
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
+V+ G + +ID+ + G+I++ L M E D W ++ C +
Sbjct: 532 KVY------GIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVH 585
Query: 502 GRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
G + + +I +L+P N + ++ + + AG E+A I +MK + E
Sbjct: 586 GNLELGERAGKNLI--KLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT---MGIXQE 640
Query: 561 HYYCMVDLLGQAGCF---DDAEQLIAEMPFKPDKTI 593
Y +++ Q F D + L AE+ K D+ +
Sbjct: 641 PGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMM 676
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 19/248 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++++L C +++K G+S+H IK G N L+ MYA +L+ A +F+++
Sbjct: 343 VLKSLASC---KNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++SWT++VT Y N A++L+ M V+ + F+ + V AC+ ++ GR
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDM-RTARVDLDQFVVACVFSACAELTVIEFGR 458
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + N+L+ MY KCG L D + NV W +++ G
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLE----DAIRVXDSMETRNVISWTAIIVGY 514
Query: 186 KQ----------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVS 234
Q + G + +ID+ + G+I++ L N M E D
Sbjct: 515 AQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 235 WTGIIVGC 242
W ++ C
Sbjct: 575 WKSLLSAC 582
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 205/711 (28%), Positives = 338/711 (47%), Gaps = 115/711 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+ L+ CG G+ LHC +K G + ++ G L+ MY + D +F+ M
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++N+V+WT+++T Y + + + L+ M G V PN F +++VL A + G +DLG
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEG-VWPNPFTFTSVLSAVASQGAVDLG 220
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R +H + + + N+L++MY KCG + + +F Q ++ WN+++
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR------DMVSWNTLM 274
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
+G +Q+H+ +K GF
Sbjct: 275 AGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFH 334
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ +T+++D Y KCGE+DD +F MP ++VVSWT +I GC + + L+A
Sbjct: 335 SDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAA----- 389
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L S + +
Sbjct: 390 -----------------------------------------------ALFSRMREDNVKP 402
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ +T+++ L A I +L Q+H I+ + Y+ VG+ L+ Y++LGN + AL
Sbjct: 403 NEFTYSTVLTASIPIL------LPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALS 456
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC-SCLA 436
+F + KDVVAWS ++ ++ G A +F M N+F ISS + C S A
Sbjct: 457 IFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTA 516
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ +G+Q HA +K ++ ++L+ MY + G ID +F+ +RD+VSW +I
Sbjct: 517 GIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMIS 576
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G +KEA+ F++M ++ + TFL V+ C HAGLV+E F SM ++ +
Sbjct: 577 GYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNIS 636
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P +EHY CMVDL +AG D+ LI MPF +W ++L AC H N +L + A++
Sbjct: 637 PTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQK 696
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
LL P+D + YV+LSN+YA G W +VRK K +K+AG SWI++
Sbjct: 697 LLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQI 747
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 219/702 (31%), Positives = 341/702 (48%), Gaps = 101/702 (14%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L+ + R G+ +H RIIK+GL +F NNLL++Y S +DAH+LFDEM
Sbjct: 16 VHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMP 75
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN----GFMYSAVLKACSLSGDL 121
K SW T+++A+ + A R+++ + + SV G+ + + K+ +
Sbjct: 76 LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHA--- 132
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
R++ I+ + + VL + C AA A
Sbjct: 133 -FLRMVSSGISPTQFTFTNVLAS--------CA-------------AAQA---------- 160
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GK+VH+F VK G SL++MY KCG+ +F+ M +D +W +I
Sbjct: 161 LDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISM 220
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ F L A LFDQ + ++ WNS+I+GY +
Sbjct: 221 HMQFCQFDL---------------ALALFDQMTD------PDIVSWNSIITGYCHQGYDI 259
Query: 302 EAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
A+ S + SS + D +T S L AC N + + Q+H IV + ++ VG+
Sbjct: 260 RALETFSFMLKSSSLKPDKFTLGSVLSACANRESL--KLGKQIHAHIVRADVDIAGAVGN 317
Query: 361 NLIDLYAR---------------------------------LGNVKSALELFHRLPKKDV 387
LI +YA+ +G++ A +F L +DV
Sbjct: 318 ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDV 377
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
VAW+ +I+G ++GL S A +LFR MI N + +++VL V S LASL GKQ+HA
Sbjct: 378 VAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAV 437
Query: 448 CVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFM-PERDVVSWTGIIVGCGQNGRAK 505
+ R E +++ +LI MY + G I D +F + RD ++WT +I+ Q+G
Sbjct: 438 AI-RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGN 496
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EAI F++M++ LKP+ IT++GVLSAC H GLVE+ + F MK + +EP HY CM
Sbjct: 497 EAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACM 556
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLLG+AG ++A I MP +PD W S+L +C H L + AE+LL P +
Sbjct: 557 IDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNS 616
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
Y+ L+N + G W+ +KVRK+ K K +K+ G SW+++
Sbjct: 617 GAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQI 658
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 210/701 (29%), Positives = 327/701 (46%), Gaps = 131/701 (18%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYA-DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H ++K G++ N LL+ Y+ L A +LFDE+ R + SW +++ A+ S
Sbjct: 23 HATLLKSGVTSPT-PWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
A RL R +HER L +T +
Sbjct: 82 HPAACRLL--------------------------------RAMHER----GLAANTFALG 105
Query: 145 TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTL 204
+ L +A+A G AL G Q+H+ VK G +
Sbjct: 106 SALR-------------------SAAAMGCSAL-------GTQLHSLAVKAGLADNVFSA 139
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------- 245
T+L+ MY KCG D LF+ MPER+ VSW ++ G E
Sbjct: 140 TALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFL 199
Query: 246 ----------------SCF-------------------TLSALVDMYSNCNVLCEARKLF 270
+CF L+A + YS C L +R++F
Sbjct: 200 PDEATFAALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIF 259
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYTFTSALKAC 329
D+ + ++ WN+M+ Y + EA+ S + +SG+ D Y+FTS + AC
Sbjct: 260 DEIGDRS-----DLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISAC 314
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN---VKSALELFHRLPKKD 386
+ +HGL+ +G+E V + LI +Y R ++ A + F L KD
Sbjct: 315 AEHRDHGGTV---IHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKD 371
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V+W+ ++ G ++HGL++ A FR M + N +++ S+ L+ CS LA LR G+Q+H
Sbjct: 372 TVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHG 431
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ GF + +SLI MY K G +DD + F+ + V W ++ G Q+G+A+
Sbjct: 432 LVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQA 491
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
+ F +M++ ++ + ITF+G+++AC HAGLV+E I +M+ YG+ +EHY C +
Sbjct: 492 VRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGI 551
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DL G+AG D A++LI MPF+PD +W ++L AC H N +L S +A LL P S
Sbjct: 552 DLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHS 611
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+Y+ LGMW + V+K K G K G SWIEV
Sbjct: 612 TYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEV 652
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 229/510 (44%), Gaps = 42/510 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR G LH +K GL+ ++F+ LL MYA DA +LFD M +N
Sbjct: 107 ALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERN 166
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW +V Y + + A++L+ M G + P+ ++A+L + S + +L H
Sbjct: 167 TVSWNALVAGYVESGKVAPAVQLFVEMEREGFL-PDEATFAALLTVVNDSTCFLMHQL-H 224
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+I + +++N + Y +CG+L +R++FD+ + + ++ WN+ML G
Sbjct: 225 GKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRS-----DLISWNAML-GAY 278
Query: 187 QVH-----------AFCVKRGFEKEDVTLTSLIDMYLKCGE-IDDGLALFNFMPERDVVS 234
H + G + + + TS+I C E D G + + +VS
Sbjct: 279 ATHGMEHEAMRFFASMMRASGVQPDMYSFTSIIS---ACAEHRDHGGTVIH-----GLVS 330
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
G FE +AL+ MY+ + C + D Y + + + WNSM++GY
Sbjct: 331 KNG-----FEGVTHVCNALIAMYTRFSENC---MMEDAYKCFDSLLLKDTVSWNSMLTGY 382
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+ + +A+ + S + D Y F++AL++C +L R Q+HGL++ SG+
Sbjct: 383 SQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALL--RLGRQIHGLVIRSGFAS 440
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ V S+LI +Y++ G + A++ F K V W+ ++ G +HG LF M+
Sbjct: 441 NNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQML 500
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ ++ CS + G ++ + + G ID+Y + G++
Sbjct: 501 ELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQL 560
Query: 474 DDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
D L MP E D + W ++ C +G
Sbjct: 561 DKAKELIDSMPFEPDAMVWMTLLGACRVHG 590
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/760 (28%), Positives = 349/760 (45%), Gaps = 121/760 (15%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDI---FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
RR++ +G+ LH + G D F LL MY L DAH+LFD M + + SW
Sbjct: 68 RRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSW 127
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVE---PNGFMYSAVLKACSLSGDLDLGRLIHE 129
++ A S+ A+ +Y M V P+G ++VLKAC GD G +H
Sbjct: 128 NALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHG 187
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ L+ T++ N L+ MY KCG L L + W +VA WNS +SG
Sbjct: 188 LAVKSGLDRSTLVANALVGMYAKCGLLDSAL--RVFEWMRDGR-DVASWNSAISGCVQNG 244
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G+++HA +K G E ++
Sbjct: 245 MFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF-NIQCN 303
Query: 206 SLIDMYLKCGEIDDGLALF-------------------------------------NFMP 228
+L+ MY +CG +D L +F F P
Sbjct: 304 ALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNP 363
Query: 229 ER-------DVVSWTGIIVGCFECSCFTL-----------SALVDMYSNC-NVLCEARKL 269
+ V G ++ E + + + L+DMY C +V C AR +
Sbjct: 364 DHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSAR-V 422
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ + W ++I+ Y + + EAI G+ +D S L+AC
Sbjct: 423 FDRMR------IKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC 476
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + + QVH + +G LD I+ + +ID+Y G V AL +F L KKD+V
Sbjct: 477 SGLKSIS--LLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVT 533
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ ++GL A LF M+N+ + + +L + L+SL +GK++H F +
Sbjct: 534 WTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLI 593
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ F E ++SL+DMY CG ++ L +F +DVV WT +I G +G K+AI
Sbjct: 594 RGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIY 653
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ M+++ + P+ ++FL +L AC H+ LV+E M +Y L+P EHY C+VDLL
Sbjct: 654 IFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLL 713
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G++G ++A + I MP +P +W ++L AC H N +L I ++LL P++P YV
Sbjct: 714 GRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYV 773
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
++SNV+A +G W+++ ++R + G K SWIE+ +
Sbjct: 774 LVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGN 813
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKED---ITLTSLIDMYLKCGEIDDGLALFKFMP 484
VL + + ++ G+Q+HA V G +D T L+ MY KCG + D LF MP
Sbjct: 61 VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR----LKPNEITFLGVLSACRHAGLVE 540
R V SW +I C +G A EA+ ++ M S P+ T VL AC G
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEG-DG 179
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + + GL+ +V + + G D A ++ M D W S +
Sbjct: 180 RCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISG 239
Query: 601 C 601
C
Sbjct: 240 C 240
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 270/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G++ + TSLI MY++ G ++D +F+ RDVVS+T +I G
Sbjct: 107 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG--- 163
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN+MISGY N+EA+
Sbjct: 164 ------------YASKGYIASAQKMFDEI------PIKDVVSWNAMISGYAETGNNKEAL 205
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T S + AC + QVH I G+ + + + LID
Sbjct: 206 ELFKEMMKTNVRPDESTMVSVVSACAQSASI--ELGRQVHSWIDDHGFGSNLKIVNALID 263
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY + G V++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 264 LYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 323
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 324 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 383
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ R + SW +I G +GRA A F M ++ ++P++ITF+G+LSAC H+G+++
Sbjct: 384 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 443
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SMK +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 444 RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 503
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+ L+ P++P YV+LSN+YAT G W+ ++K+R G KK G
Sbjct: 504 MHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 563
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 564 SSIEIDS 570
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 186/393 (47%), Gaps = 36/393 (9%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ + YTF LK+C F R Q
Sbjct: 52 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF--REGQQ 109
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GY+LD V ++LI + YA G
Sbjct: 110 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 169
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA ++F +P KDVV+W+ +I G + G N A LF++M+ +N ++ + SV+
Sbjct: 170 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 229
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ AS+ G+QVH++ GF + +LID+Y+KCGE++ LF+ + +DV+SW
Sbjct: 230 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 289
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L +L AC H G +E W K
Sbjct: 290 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 349
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
G+ H ++D+ + G + A+Q+ + + W +M+ H
Sbjct: 350 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAA 408
Query: 611 SIIAEQLLATSPE-DPSKYVMLSNVYATLGMWD 642
I ++ E D +V L + + GM D
Sbjct: 409 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 441
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 198/441 (44%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ ++G+ +H ++K G D++ +L+SMY L DA K+FD+ + +++
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK- 213
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ +V+ AC+ S ++LGR +H I + ++N L+D+Y+KCG +
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ S Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 274 ACGLFEGLS------YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 327
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G I+ G + ++ +R + G S S L+DMY+ C + A+
Sbjct: 328 LPACAHLGAIEIGRWIHVYINKR--------LKGVANASSHRTS-LIDMYAKCGDIEAAQ 378
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD + + S+ WN+MI G+ ++ + A + S + + + D TF L
Sbjct: 379 QVFDSILNRSLSS------WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLS 432
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + + DY + L IDL G K A E+ +
Sbjct: 433 AC-------SHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+ + D V W L+ C HG
Sbjct: 486 MEMEPDGVIWCSLLKACKMHG 506
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/580 (21%), Positives = 224/580 (38%), Gaps = 141/580 (24%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ +H ++IK GL + + L+ + F L A +F+ + N++ W TM +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ P A+ LY M+ G + PN + + +LK+C+ S G+ IH + + + D
Sbjct: 64 ALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------------- 172
+ +L+ MYV+ G L RK+FDQ S+ +A+ Y
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 173 GNVALWNSMLSG--------------------------------------------GKQV 188
+V WN+M+SG G+QV
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
H++ GF + +LID+Y+KCGE++ LF + +DV+SW +I G
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG------- 295
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
Y++ N+ +EA+ L
Sbjct: 296 --------YTHMNLY-------------------------------------KEALLLFQ 310
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ SG + T S L AC +L + V+ G ++LID+YA+
Sbjct: 311 EMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAK 370
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G++++A ++F + + + +W+ +I G HG + A+ +F M + + + +
Sbjct: 371 CGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGL 430
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDDGLALFK 481
L CS L G+ + KED +T +ID+ G + +
Sbjct: 431 LSACSHSGMLDLGRHIFRSM------KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 484
Query: 482 FMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
M E D V W ++ C +G + +Y Q +I+ K
Sbjct: 485 TMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPK 524
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y + A LF
Sbjct: 219 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 278
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 279 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAI 337
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
++GR IH I + + + + +L+DMY KCG + +++FD N + S+
Sbjct: 338 EIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS------ 391
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ AF + K E +D+T L+ G +D G +F M
Sbjct: 392 WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMK 451
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
E ++ GC ++D+ + + EA ++ + W A
Sbjct: 452 EDYKITPKLEHYGC----------MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 501
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GNV L S + + +N + LLS+I+++
Sbjct: 502 CKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG--- 62
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + R G+Q+H +K G++ +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV-------------------- 496
TSLI MY++ G ++D +F RDVVS+T +I
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 497 -----------GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
G + G KEA+ F+EM+++ ++P+E T + V+SAC + +E +
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L + +K D W +++ TH
Sbjct: 243 HSWID-DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG-YTHM 299
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLS 326
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/664 (29%), Positives = 334/664 (50%), Gaps = 104/664 (15%)
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
+ S E N ++Y ++L++C +GD G+ +H I ++ D N LL+ YVK SL
Sbjct: 37 HSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLP 96
Query: 157 -TRKLFDQYSNWAASAYGN--------------VALWNSMLSGGKQ-------------- 187
KLFD+ + ++ + L++ + G +
Sbjct: 97 DAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLV 156
Query: 188 ----------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
VHA K GF+ + T+LID Y CG + +F+ + +D+VSWTG
Sbjct: 157 SAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTG 216
Query: 238 IIV-----GCFECSC---------------FTLSA------------------------- 252
++ CFE S FT ++
Sbjct: 217 MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS 276
Query: 253 ----------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
L+D+Y + +A ++F++ +V W+ MI+ Y +EQ+EE
Sbjct: 277 YLEELFVGVELIDLYIKSGDVDDALQVFEEMPK------DDVIPWSFMIARYAQSEQSEE 330
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
AI + + + + +T S L+AC +L++ + Q+H +V G +++ V + L
Sbjct: 331 AIEMFCRMRRGLVLPNQFTLASLLQACASLVDL--QLGNQIHCHVVKVGLDMNVFVSNAL 388
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YA+ G ++++L+LF P V+W+ +I+G + G A +LF+DM+ +
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
SSVL+ C+ +A+L G Q+H+ VK ++K + +LIDMY KCG I D +F
Sbjct: 449 VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDM 508
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ E D VSW +I G +G EA+ F+ M+++ KP+++TF+G+LSAC +AGL++
Sbjct: 509 LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F SM EY +EP EHY CMV LLG++G D A +L+ E+PF+P +W ++L AC
Sbjct: 569 QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACV 628
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
HN+ +L I A+++L PED + +V+LSN+YA W +++ +R + K+ G K+ G+
Sbjct: 629 IHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGL 688
Query: 662 SWIE 665
SWIE
Sbjct: 689 SWIE 692
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ G +HC ++K GL ++F N L+ MYA + ++ +LF E
Sbjct: 354 LQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD 413
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T++ Y A+ L+ MLE V+ YS+VL+AC+ L+ G IH
Sbjct: 414 VSWNTVIVGYVQAGNGEKALILFKDMLE-CQVQGTEVTYSSVLRACAGIAALEPGSQIHS 472
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + +TV+ N L+DMY KCG++ R +FD + V+ WN+M+SG
Sbjct: 473 LSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE-----HDQVS-WNAMISGYSV 526
Query: 185 ----GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G+ + F ++ + + VT ++ G +D G A F M E
Sbjct: 527 HGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEE 578
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 330/649 (50%), Gaps = 45/649 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C ++QG+ +H +++ L + N+LL MY+ S D+ LFD M+
Sbjct: 320 VSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSV 379
Query: 67 KNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ VSW+T++ A + + A+ LY ML G V P S VL+AC +L G+
Sbjct: 380 RDSVSWSTIIMACSREDSHCRDALPLYRSMLHEG-VMPKTLALSMVLEACGSLAELKGGK 438
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
L+H + LE D V + +L++MY KCG++ RK+FD+ +N + LWNSM++
Sbjct: 439 LVHAHVIESGLEGDLVGI-SLVNMYAKCGTVGEARKVFDRINNRSR------ILWNSMIT 491
Query: 184 GGKQ------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
++ +H F G + +T ++++ + ++++G +
Sbjct: 492 AYQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIH----------- 540
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T I+ F +AL +MY+ C L EAR +FD + +V WN+MI+ YV
Sbjct: 541 TRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSM------VFRDVVSWNNMIAAYV 594
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
E AI+L + GM D TFTS L AC + Q+H I S E D
Sbjct: 595 QGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVD--GRQIHSWIAESRLEND 652
Query: 356 YIVGSNLIDLYARLGNVKSALELF------HRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
++ + LI +YA G++ +A E+F R +D+ W+ +I +HG A L
Sbjct: 653 IVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALEL 712
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+ M + + ++ SVL C+ L+ LR+G+ +HA ++RG + S++ MY K
Sbjct: 713 YEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGK 772
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG D+ +F+ +D+ WT +I ++G ++A+ F+ + Q ++ + +TF+ +
Sbjct: 773 CGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAM 832
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H GL+EE F SM E G+EP++EH+ C+VDLL +AG AE+ ++ MP
Sbjct: 833 LSACSHVGLIEEGCEFFASM-AELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAA 891
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+ + ++L AC H + + +AE+L A PE + YV LSN+ L
Sbjct: 892 NTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNIEMVL 940
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 171/639 (26%), Positives = 281/639 (43%), Gaps = 111/639 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + ++++GK + R+ L DI N ++MY L+ A + F M R+++
Sbjct: 17 LTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDV 76
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M+ AY+ + + + +++L+ ML G+ PN + ++L C L+ GR IH
Sbjct: 77 VSWTVMIGAYSQDGKFSLSLQLFREMLLEGTA-PNSVTFVSILSGCEAPSLLEQGRQIHA 135
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS--------NWAA--SAYG------ 173
+ LE V+ N+LL MY +C S ++ +W AY
Sbjct: 136 LVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFS 195
Query: 174 ----------------NVALWNSMLSG---------GKQVHAFCVKRGFEKE-DVTLTSL 207
N + S+LSG G+Q+HA V+ E D+ + +L
Sbjct: 196 LSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNL 255
Query: 208 -IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
I+MY+KCG +D + F M RDVVSWT +I + F+LS
Sbjct: 256 TINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLS--------------- 300
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ L + G +S TF S L
Sbjct: 301 -------------------------------------LQLFREMLLEGTAPNSVTFVSIL 323
Query: 327 KAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
C +LL Q+H L+V S E +V ++L+ +Y+R + + + LF R+
Sbjct: 324 SGCEAPSLLEQGR----QIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSV 379
Query: 385 KDVVAWSGLIMGCTK---HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+D V+WS +IM C++ H ++L L+R M++ +S VL+ C LA L+ G
Sbjct: 380 RDSVSWSTIIMACSREDSHCRDALP--LYRSMLHEGVMPKTLALSMVLEACGSLAELKGG 437
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K VHA ++ G E D+ SL++MY KCG + + +F + R + W +I Q
Sbjct: 438 KLVHAHVIESGLEG-DLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QE 495
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
EA+ F+EM + P+ ITF+ VL+AC +A +E TI T + + G +
Sbjct: 496 KDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRI-VDSGFAADVRV 554
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ ++ + G +A + M F+ D W +M+ A
Sbjct: 555 ATALFNMYAKCGSLGEARGVFDSMVFR-DVVSWNNMIAA 592
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 170/681 (24%), Positives = 287/681 (42%), Gaps = 106/681 (15%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH-KLFDEMA 65
V L C ++QG+ +H +++ L + N+LL MY+ S D+ + F M
Sbjct: 115 VSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMK 174
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R+++VSWT M+ AY+ + + + +I+L+ ML G+ PN + ++L C L+ GR
Sbjct: 175 RRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTA-PNSVTFVSILSGCEAPSLLEQGR 233
Query: 126 LIHERITREKLE--YDTVLMNTLLDMYVKCG----------------------------- 154
IH + LE D ++N ++MYVKCG
Sbjct: 234 QIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQ 293
Query: 155 ----SLTRKLFDQ--YSNWAASAYGNVALWN-----SMLSGGKQVHAFCVKRGFEKEDVT 203
SL+ +LF + A ++ V++ + S+L G+Q+HA V+ E V
Sbjct: 294 DGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVV 353
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
SL+ MY +C +D +LF+ M RD VSW+ II+ C AL
Sbjct: 354 ANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDAL---------- 403
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
L+ SM+ G+ + +
Sbjct: 404 ---------------------PLYRSML--------------------HEGVMPKTLALS 422
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
L+AC +L VH ++ SG E D +VG +L+++YA+ G V A ++F R+
Sbjct: 423 MVLEACGSLAELKG--GKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRIN 479
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ + W+ +I + + A LFR+M ++ +VL C A L G+
Sbjct: 480 NRSRILWNSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRT 538
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H V GF + T+L +MY KCG + + +F M RDVVSW +I Q
Sbjct: 539 IHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRD 598
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
+ AI+ M ++P++ TF +L+AC + + I S E LE +
Sbjct: 599 GEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIH-SWIAESRLENDIVMVT 657
Query: 564 CMVDLLGQAGCFDDAEQLIAEM-----PFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
++ + G ++A ++ + D +W SM+ A E H + + EQ+
Sbjct: 658 GLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMH 717
Query: 619 ATSPE-DPSKYVMLSNVYATL 638
+ E D ++ + N A L
Sbjct: 718 SRQVEADRVTFISVLNACAHL 738
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 239/539 (44%), Gaps = 44/539 (8%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
+ P+ M +L AC+ G L+ G+LI +R+ +LE D + N ++MYVKCG L +
Sbjct: 6 IPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAV 65
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK---------RGFEKEDVTLTSLIDMY 211
+A +V W M+ Q F + G VT S++
Sbjct: 66 ----QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGC 121
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
++ G + + E E ++L+ MYS C ++R
Sbjct: 122 EAPSLLEQGRQIHALVVE-----------SSLESHVVVANSLLGMYSRCRSWEDSR---- 166
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-- 329
++A +V W MI Y + + +I L + G +S TF S L C
Sbjct: 167 -MQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEA 225
Query: 330 INLLNFNSRFALQVHGLIVTSGYE--LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
+LL Q+H L+V S E LD V + I++Y + G + A++ F R+ ++DV
Sbjct: 226 PSLLEQGR----QIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDV 281
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+W+ +I ++ G SL+ LFR+M+ N S+L C + L +G+Q+HA
Sbjct: 282 VSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHAL 341
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG-QNGRAKE 506
V+ E + SL+ MY +C +D +LF M RD VSW+ II+ C ++ ++
Sbjct: 342 VVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRD 401
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ ++ M+ + P + VL AC L E + + + E GLE L +
Sbjct: 402 ALPLYRSMLHEGVMPKTLALSMVLEAC--GSLAELKGGKLVHAHVIESGLEGDLVG-ISL 458
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE-QLLATSPE 623
V++ + G +A ++ + + + +W SM+ A + + + + + E Q SP+
Sbjct: 459 VNMYAKCGTVGEARKVFDRINNR-SRILWNSMITAYQEKDPHEALHLFREMQPEGVSPD 516
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 210/701 (29%), Positives = 323/701 (46%), Gaps = 120/701 (17%)
Query: 6 IVEALRHC--GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ AL C S+ Q + H I++ L D +LLS YA+ SL+
Sbjct: 1 MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLST------- 53
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
P ++ L +H+ P F +S+++ A + S
Sbjct: 54 ---------------------PQLSLTLSSHL-----PHPTLFSFSSLIHAFARSHHFPH 87
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+ +L D L+ + + C SL L
Sbjct: 88 VLTTFSHLHPLRLIPDAFLLPSAIK---SCASL-----------------------RALD 121
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
G+Q+HAF GF + + +SL MYLKC I D LF+ MP+RDVV W+ +I G
Sbjct: 122 PGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG-- 179
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
YS ++ EA++LF + S N+ WN M++G+ N +EA
Sbjct: 180 -------------YSRLGLVEEAKELFGEMRSGGVEP--NLVSWNGMLAGFGNNGFYDEA 224
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKA--CINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+ + + G D T + L A C+ + QVHG ++ G D V S
Sbjct: 225 VGMFRMMLVQGFWPDGSTVSCVLPAVGCLE----DVVVGAQVHGYVIKQGLGSDKFVVSA 280
Query: 362 LIDLYARLGNVK-------------------------------SALELFHRLPKK----D 386
++D+Y + G VK +ALE+F++ + +
Sbjct: 281 MLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELN 340
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VV W+ +I C+++G + A LFRDM + N I S++ C +++L GK++H
Sbjct: 341 VVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHC 400
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
F ++RG + ++LIDMY KCG I F M ++VSW ++ G +G+AKE
Sbjct: 401 FSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKE 460
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
+ F M+QS KP+ +TF VLSAC GL EE W + SM E+G+EP +EHY C+V
Sbjct: 461 TMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLV 520
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
LL + G ++A +I EMPF+PD +W ++L +C HNN L I AE+L P +P
Sbjct: 521 TLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPG 580
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
Y++LSN+YA+ G+WD +++R+ K G K G SWIEV
Sbjct: 581 NYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEV 621
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 208/751 (27%), Positives = 344/751 (45%), Gaps = 121/751 (16%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
K+G H IK GL D+F G + + YA + +++A K+F+EM +N+VSWT+++ +Y
Sbjct: 76 KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY 135
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ N I Y M G + N + V+ +C D+ LG + + LE
Sbjct: 136 SDNGSKKEVINTYKRMRHEG-ICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETK 194
Query: 140 TVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG------------- 184
N+L+ M+ CG + +F++ + + WNS++S
Sbjct: 195 VSAANSLIFMFGGCGDINEACSIFNEMNE------RDTISWNSIISANAQNTLHEESFRY 248
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
GK VH VK G E +L+ +Y
Sbjct: 249 FHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSD 308
Query: 214 CGEIDDGLALFNFMPERDVVSW-----------------------------------TGI 238
G D +F MPERD++SW T
Sbjct: 309 AGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSA 368
Query: 239 IVGCFECSCFT--------------------LSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+ C + FT + L+ Y C+ + EA+K+F +
Sbjct: 369 LAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKL-- 426
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAIT---LLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+ WN++I G+ N + EA+ L+ +SG +D T + L +C+ +
Sbjct: 427 ----DKVTWNALIGGFANNAELNEAVAAFKLMREGSTSG--VDYITIVNILGSCLTHEDL 480
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
++ + +H V +G++LD V S+LI +YA+ G++ S+ +F +L K W+ +I
Sbjct: 481 -IKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIA 539
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
++G A L M ++ + +QF S+ L V + LA L G+Q+H +K GFE
Sbjct: 540 ANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFEL 599
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ + + +DMY KCGE+DD L + +R +SW +I ++G+ +A F +M+
Sbjct: 600 DHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDML 659
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ +KPN ++F+ +LSAC H GLV+E + SM YG++P +EH CM+DLLG++G
Sbjct: 660 KLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRL 719
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+AE I EMP P+ +W S+L +C + N L A+ LL P D S YV+ SNV+
Sbjct: 720 VEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVF 779
Query: 636 ATLGMWDSLSKVR-KAGKKLGEKKAGMSWIE 665
AT+G W+ + VR + G +KK SW++
Sbjct: 780 ATIGRWEDVEDVRGQMGAHKIQKKPAHSWVK 810
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 159/660 (24%), Positives = 269/660 (40%), Gaps = 117/660 (17%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY+ F +N A +FD M+ +N SW M++ Y A+ + + G ++P+GF
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIG-IKPSGF 59
Query: 107 MYSAVLKACSLSGDL-DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQ 163
M ++++ AC+ S + G H + L YD + + + Y G S +K+F++
Sbjct: 60 MIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 164 YSNWAASAYGNVALWNSMLSG--------------------------------------- 184
+ NV W S++
Sbjct: 120 MPD------RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFL 173
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
G Q+ +K G E + SLI M+ CG+I++ ++FN M ERD +SW II
Sbjct: 174 MDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSII 233
Query: 240 VGCF--------------------ECSCFTLSALVDMYSNCNVL---------------- 263
E + TLS L+ + + + L
Sbjct: 234 SANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293
Query: 264 ---CEARKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHI 310
C L YS S + WNSM++ YV + + A+ + + +
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
I+ TFTSAL AC++ F + L HG +V G + + I+G+ LI Y +
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNGKIL--HGFVVVLGLQDELIIGNTLITFYGKCH 411
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHG-LNS--LAYLLFRDMINSNQDVNQFIISS 427
+ A ++F R+PK D V W+ LI G + LN A+ L R+ S V+ I +
Sbjct: 412 KMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMRE--GSTSGVDYITIVN 469
Query: 428 VLKVCSCLASL-RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+L C L + G +HA V GF+ + +SLI MY KCG++ +F + +
Sbjct: 470 ILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFK 529
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
W II + G +EA+ M + ++ ++ F LS ++EE +
Sbjct: 530 TSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLH 589
Query: 547 TSMKPEYGLEPHLEHYY--CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
S + G E L+H+ +D+ G+ G DDA +++ + P + W +++ H
Sbjct: 590 GS-TIKLGFE--LDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARH 645
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 234/536 (43%), Gaps = 74/536 (13%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG +K GK +H +KYGL +I N LLS+Y+D DA +F M ++++SW
Sbjct: 271 CGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISW 330
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M+ Y + R A++++ ML + E N +++ L AC G+++H +
Sbjct: 331 NSMLACYVQDGRCLCALKVFAEML-WMKKEINYVTFTSALAACLDPEFFTNGKILHGFVV 389
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
L+ + ++ NTL+ Y KC + +K+F + + WN+++ G
Sbjct: 390 VLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKL------DKVTWNALIGGFANNAE 443
Query: 185 -GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
+ V AF + R V +++++ C +D + + + +V F
Sbjct: 444 LNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHED-------LIKYGIPIHAHTVVTGF 496
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ S+L+ MY+ C L + +FDQ + ++WN++I+ EEA
Sbjct: 497 DLDQHVQSSLITMYAKCGDLHSSSYIFDQL------VFKTSSVWNAIIAANARYGFGEEA 550
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L+ + S+G+ D + F++AL +L Q+HG + G+ELD+ + + +
Sbjct: 551 LKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEE--GQQLHGSTIKLGFELDHFIINAAM 608
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+Y + G + AL + + + ++W+ LI +HG A F DM+
Sbjct: 609 DMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDML--------- 659
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
K G + ++ L+ G +D+GLA + M
Sbjct: 660 --------------------------KLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASM 693
Query: 484 P-----ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ + +I G++GR EA A+ EM + PN++ + +L++CR
Sbjct: 694 TSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEM---PIPPNDLVWRSLLASCR 746
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 214/502 (42%), Gaps = 42/502 (8%)
Query: 149 MYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GF 197
MY K G + + +FD+ S N A WN M+SG G V A R G
Sbjct: 1 MYSKFGRINYAQLVFDRMSE------RNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGI 54
Query: 198 EKEDVTLTSLIDMYLKCGEI-DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ + SL+ K + +G F + G+I F + F V
Sbjct: 55 KPSGFMIASLVTACNKSSIMAKEGFQFHGFAIK------CGLIYDVFVGTSF-----VHF 103
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y++ ++ A+K+F++ NV W S++ Y N +E I + G+C
Sbjct: 104 YASYGIVSNAQKMFNEMPD------RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGIC 157
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+ + +C L++ Q+ G + G E ++LI ++ G++ A
Sbjct: 158 CNENNIALVISSCGFLMDI--ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEAC 215
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F+ + ++D ++W+ +I ++ L+ ++ F M ++++N +S +L +C +
Sbjct: 216 SIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVD 275
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
L+ GK VH VK G E +L+ +Y G D +F+ MPERD++SW ++
Sbjct: 276 YLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLA 335
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
Q+GR A+ F EM+ + + N +TF L+AC I GL+
Sbjct: 336 CYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQ 394
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE- 615
L ++ G+ +A+++ MP K DK W +++ NN +L +A
Sbjct: 395 DELIIGNTLITFYGKCHKMAEAKKVFQRMP-KLDKVTWNALIGGFA--NNAELNEAVAAF 451
Query: 616 QLLATSPEDPSKYVMLSNVYAT 637
+L+ Y+ + N+ +
Sbjct: 452 KLMREGSTSGVDYITIVNILGS 473
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 177/451 (39%), Gaps = 79/451 (17%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C GK LH ++ GL ++ GN L++ Y + +A K+F M + +
Sbjct: 368 ALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLD 427
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLI 127
V+W ++ + +N N A+ + M E + + +L +C DL G I
Sbjct: 428 KVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPI 487
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY-----SNW-----AASAYG-- 173
H + D + ++L+ MY KCG L + +FDQ S W A + YG
Sbjct: 488 HAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFG 547
Query: 174 --------------------------NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
+VA +ML G+Q+H +K GFE + + +
Sbjct: 548 EEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAA 607
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-----GCFECSCFTLSALVDMYSNCNV 262
+DMY KCGE+DD L + +R +SW +I G F + T ++ + N
Sbjct: 608 MDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNH 667
Query: 263 L--------CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+ C L D+ +A + SM S Y + E + ++ + SG
Sbjct: 668 VSFVCLLSACSHGGLVDE----------GLAYYASMTSVYGIQPGIEHCVCMIDLLGRSG 717
Query: 315 MCIDSYTFTSALKACINLLNFNSRFA-------LQVHGLIVTSGYELD------YIVGSN 361
+++ F + + N L + S A L + ELD Y++ SN
Sbjct: 718 RLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSN 777
Query: 362 LIDLYARLGNVKSALELF--HRLPKKDVVAW 390
+ R +V+ H++ KK +W
Sbjct: 778 VFATIGRWEDVEDVRGQMGAHKIQKKPAHSW 808
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 211/665 (31%), Positives = 334/665 (50%), Gaps = 40/665 (6%)
Query: 22 GKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ +H K GL+ D F GN+L+SMY ++DA K+F+ MA +N+VSW ++ A
Sbjct: 82 GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141
Query: 81 SNKRPNWAIRLYNHMLE--YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+R + L+ LE G+ P+ VL C+ + GR +H + +
Sbjct: 142 DPRR---GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198
Query: 139 DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV- 193
+ N L+DMY KCG + + A NV WN ML G G+ AF +
Sbjct: 199 APRVSNVLVDMYAKCGEMADAEC-AFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLL 257
Query: 194 ------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+RG +++T+ S++ + E+ L F+ R + TG +V
Sbjct: 258 REMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGL-HLTGDMVP------ 310
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+AL+ Y C L A ++FD S S+ WN++I + N + AI L
Sbjct: 311 ---NALIAAYGRCGCLLHACRVFDGICSKMVSS------WNALIGAHAQNGEASAAIELF 361
Query: 308 SHI-HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ ++ G D ++ S L AC NL + A HG I+ +G E D + +L+ +Y
Sbjct: 362 REMTNACGQKPDWFSIGSLLLACGNLKHLLHGKA--AHGFILRNGLEKDSFIRVSLLSVY 419
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD--VNQFI 424
+ G A LF + +KD V+W+ +I G +++GL + LFR+M + +
Sbjct: 420 IQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLA 479
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+S L CS L ++R GK++H F +K ++ +S+IDMY KCG +DD F +
Sbjct: 480 ATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLK 539
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+D VSWT +I G NGR KEA+ + +M + ++P+ T+LG+L AC HAG++E+
Sbjct: 540 AKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLC 599
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F M+ +E LEHY C++ +L +AG F DA L+ MP +PD I +S+L AC H
Sbjct: 600 FFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMH 659
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
+L +A++LL P YV+ SN+YA WD + KVRK + G K+ G SW
Sbjct: 660 GEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSW 719
Query: 664 IEVSS 668
I+++
Sbjct: 720 IDIAG 724
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + + GK+ H I++ GL +D F +LLS+Y + A LFD + K+ VSW
Sbjct: 384 CGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSW 443
Query: 73 TTMVTAYTSNKRPNWAIRLYNHML-EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
TM+ Y+ N P +++L+ M + G P+ ++ L ACS + LG+ +H
Sbjct: 444 NTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFA 503
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ L D+ L ++++DMY KCGS+ R FD+ A + W M++G
Sbjct: 504 LKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVS------WTVMITGYAVNG 557
Query: 185 -GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE---IDDGLALFNFM 227
GK+ K G E + + + + + CG ++DGL F M
Sbjct: 558 RGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEM 604
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +++ GK +HC +K L +D F ++++ MY+ S++DA FD + K+
Sbjct: 483 ALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKD 542
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSWT M+T Y N R A+ LY+ M G +EP+GF Y +L AC +G L+ G
Sbjct: 543 AVSWTVMITGYAVNGRGKEAVGLYDKMGREG-MEPDGFTYLGLLMACGHAGMLEDG 597
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 341/680 (50%), Gaps = 42/680 (6%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
R +V L C ++ G+ +H ++ G+ + L+ Y F + LFD
Sbjct: 155 RTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFD 213
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +NIVSW M++ Y A+ L+ ML V+ + ++AC+ G L
Sbjct: 214 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDEVKFDCVTMLVAVQACAELGSLK 272
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LG+ IH+ + + D ++N LL+MY GSL + +LF+ N A LWNS
Sbjct: 273 LGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA------PLWNS 326
Query: 181 MLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M+S G A + G +K++ T+ ++ M C E+ GL +
Sbjct: 327 MISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM---CEELASGLLKGKSLHAH- 382
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+I +AL+ MY+ N + +K+FD+ ++ WN+MI
Sbjct: 383 ------VIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGV------DIISWNTMI 430
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
N +A L + S + +SYT S L AC ++ + F +HG ++
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD--FGRSIHGYVMKHS 488
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E++ + + L D+Y G+ +A +LF P +D+++W+ +I K+ A LLF
Sbjct: 489 IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFH 548
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-KEDITLT-SLIDMYLK 469
MI S + N I +VL + LA+L +G+ +HA+ +RGF D++L + I MY +
Sbjct: 549 RMI-SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 607
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + +FK +P+R+++SW +I G G NGR +A+ F +M++ +PN +TF+ V
Sbjct: 608 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 667
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H+G +E +F SM ++ + P L HY C+VDLL + GC D+A + I MP +P
Sbjct: 668 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 727
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D ++W ++L +C +++ K I E+L P + YV+LSNVYAT G+W + ++R
Sbjct: 728 DASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRT 787
Query: 650 AGKKLG-EKKAGMSWIEVSS 668
K+ G K G+SWI V +
Sbjct: 788 WLKEKGLRKPPGISWIIVKN 807
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 160/632 (25%), Positives = 263/632 (41%), Gaps = 114/632 (18%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ W +++ + K + Y M G V PN VLKAC+ ++ G+
Sbjct: 16 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLG-VLPNNTTLPLVLKACAAQNAVERGKS 74
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALWN 179
IH I L D + ++D Y KCG + R +FD S+ W A YG V W
Sbjct: 75 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG-WG 133
Query: 180 ----------------------------------SMLSGGKQVHAFCVKRG-FEKEDVTL 204
S L G+ VH +C++ G F+
Sbjct: 134 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 193
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------- 245
T+LI YL+ ++ LF+ M R++VSW +I G ++
Sbjct: 194 TALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK 252
Query: 246 -SCFT-----------------------------------LSALVDMYSNCNVLCEARKL 269
C T L+AL++MYSN L + +L
Sbjct: 253 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 312
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F+ + A LWNSMIS Y +EEA+ L + S G+ D T L C
Sbjct: 313 FESVPNRDA------PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + + +H ++ SG +D +G+ L+ +Y L V+S ++F R+ D+++
Sbjct: 367 EELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 425
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I+ ++ L + A LF M S N + I S+L C + L G+ +H + +
Sbjct: 426 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 485
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K E T+L DMY+ CG+ LF+ P+RD++SW +I +N +A +A+
Sbjct: 486 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALL 545
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI---FTSMKPEYGLEPHLEHYYCMV 566
F MI S +PN +T + VLS+ H + + ++ T GL+ L + + +
Sbjct: 546 LFHRMI-SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF--I 602
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + G AE + +P K + W +M+
Sbjct: 603 TMYARCGSLQSAENIFKTLP-KRNIISWNAMI 633
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 16/320 (5%)
Query: 287 WNSMISGYVLNEQNEEAI-TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WNS+I + N +N++AI + + + S G+ ++ T LKAC N R +H
Sbjct: 21 WNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ-NAVER-GKSIHR 77
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
I + D VG+ ++D Y + G V+ A +F + +DVV W+ ++ G G
Sbjct: 78 SIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEE 137
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG-FEKEDITLTSLI 464
A LL R+M N N + ++L C + LR G+ VH +C++ G F+ T+LI
Sbjct: 138 AMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALI 197
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
YL+ ++ LF M R++VSW +I G G +A+ F +M+ +K + +
Sbjct: 198 GFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCV 256
Query: 525 TFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYY---CMVDLLGQAGCFDDAEQ 580
T L + AC G ++ I ++K E+ +E Y ++++ G + + Q
Sbjct: 257 TMLVAVQACAELGSLKLGKQIHQLAIKFEF-----VEDLYILNALLNMYSNNGSLESSHQ 311
Query: 581 LIAEMPFKPDKTIWASMLKA 600
L +P + D +W SM+ A
Sbjct: 312 LFESVPNR-DAPLWNSMISA 330
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/655 (29%), Positives = 340/655 (51%), Gaps = 35/655 (5%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K + R+IK G+ D ++L+++Y SL A ++ +EM +++ W +++ S
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
A++L+ +++ + + N F++++++ A + GD G IH + + E D ++
Sbjct: 69 YPLQEAVQLF-YLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCV 193
N + MY+K T+ + + + + A N+A N++LSG G ++ +
Sbjct: 128 SNAFVTMYMK----TQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLL 183
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
GFE T S++ G++++G A+ +I ++L
Sbjct: 184 VEGFEPNMYTFISILKTCASKGDLNEGKAIHG-----------QVIKSGINPDSHLWNSL 232
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
V++Y+ C A K+F + +V W ++I+G+V E + + + + +
Sbjct: 233 VNVYAKCGSANYACKVFGEIPE------RDVVSWTALITGFVA-EGYGSGLRIFNQMLAE 285
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G + YTF S L++C +L + + QVH IV + + + VG+ L+D+YA+ ++
Sbjct: 286 GFNPNMYTFISILRSCSSLSDVD--LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLE 343
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A +F+RL K+D+ AW+ ++ G + G A F M N+F ++S L CS
Sbjct: 344 DAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCS 403
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+A+L G+Q+H+ +K G + ++L+DMY KCG ++D +F + RD VSW
Sbjct: 404 RIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNT 463
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II G Q+G+ +A+ F+ M+ P+E+TF+GVLSAC H GL+EE F S+ Y
Sbjct: 464 IICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIY 523
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+ P +EHY CMVD+LG+AG F + E I EM + IW ++L AC+ H N +
Sbjct: 524 GITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA 583
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
A +L PE S Y++LSN++A GMWD ++ VR G KK G SW+EV+
Sbjct: 584 AMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 638
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 197/482 (40%), Gaps = 117/482 (24%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+S+H + KYG DI N ++MY S+ + + F M +N+ S +++ +
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ + R+ +L G EPN + + ++LK C+ GDL+ G+ IH ++ + + D+
Sbjct: 169 TETCDQGPRILIQLLVEG-FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227
Query: 142 LMNTLLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNVA--------LWNSMLSG-- 184
L N+L+++Y KCGS K+F + +W A G VA ++N ML+
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGF 287
Query: 185 ----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
GKQVHA VK + D T+L+DMY K ++D
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347
Query: 223 LFNFMPERDVVSWTGIIVG------------CF--------------------ECS---- 246
+FN + +RD+ +WT I+ G CF CS
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407
Query: 247 -------------------CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
F SALVDMY+ C + +A +FD S + W
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS------RDTVSW 461
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-------LNFNSRFA 340
N++I GY + Q +A+ + G D TF L AC ++ +FNS
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNS--L 519
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTK 399
+++G+ T + + ++D+ R G + +V+ W ++ C
Sbjct: 520 SKIYGITPTIEHY------ACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKM 573
Query: 400 HG 401
HG
Sbjct: 574 HG 575
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 140/280 (50%), Gaps = 42/280 (15%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
++ + L+ C + + +GK++H ++IK G++ D N+L+++YA S N A K+F
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E+ +++VSWT ++T + + + +R++N ML G PN + + ++L++CS D+
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDV 307
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-----------TRKLFDQ---YSNW 167
DLG+ +H +I + L+ + + L+DMY K L R LF + +
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367
Query: 168 AASAYGNVAL-----------------WNSMLSG---------GKQVHAFCVKRGFEKED 201
A G A+ S LSG G+Q+H+ +K G +
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 427
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
++L+DMY KCG ++D +F+ + RD VSW II G
Sbjct: 428 FVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ +L C + ++ G+ LH IK G S D+F + L+ MYA + DA +FD +
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 454
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ VSW T++ Y+ + + A++ + ML+ G+V P+ + VL ACS G ++ G+
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV-PDEVTFIGVLSACSHMGLIEEGK 513
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 333/672 (49%), Gaps = 52/672 (7%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R G+++H ++K G D F GNN+L++Y F L+ A K+FD M +N ++WT+++
Sbjct: 81 RDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLI 140
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y + A + M ++G N + +L+ACS D LG IH + +
Sbjct: 141 KGYLEDNDFQSAFSIAGDMHKFGE-NFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGF 199
Query: 137 EYDTVLMNTLLDMYVKCG--SLTRKLFDQYS-------NWAASAYGNVALWNSMLSGGKQ 187
+ + + +L+ MY K G + K+FD N+ YG +GGK
Sbjct: 200 DENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAG------NGGKA 253
Query: 188 VHAF--CVKRGFEKEDVTLTSLI-----DMYLKCGEIDDGLAL-FNFMPERDVVSWTGII 239
+ F + GFE D T T++I D+ ++ G+ GLA + F+ E V +
Sbjct: 254 IEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGN----- 308
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
A++ MY N + EA ++F S N+ W ++ISGY +
Sbjct: 309 ------------AIITMYGNSGMPKEAERMFSSMSE------KNLISWTALISGYSRSGY 350
Query: 300 NEEAITLLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ +H G+ DS T+ L C + N LQ+HG ++ G D V
Sbjct: 351 GKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNL--ELGLQIHGFVMKLGCACDVNV 408
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG-CTKHGLNSLAYLLFRDMINSN 417
+ L+DLYA+ ++SA +F L K + +++ ++ G G +LF + +
Sbjct: 409 ATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAG 468
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ S +L + + ASL +G+ HA+ VK GF+ S+I MY KCG I+D
Sbjct: 469 VKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAH 528
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M RD +SW +I +G+A++++ F+EM + P+E T L +L AC ++G
Sbjct: 529 QMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSG 588
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L ++ +F M+P+YG++P LEHY CM DLLG+AG +A +I PF +W ++
Sbjct: 589 LWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTL 648
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
+ C+ H N + ++ LL SP + Y+++SN+YA+ M D +KVRK L
Sbjct: 649 VNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFR 708
Query: 657 KKAGMSWIEVSS 668
K+AG SWIE+ +
Sbjct: 709 KEAGSSWIEIDN 720
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 168/437 (38%), Gaps = 107/437 (24%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++GK L KYG + GN +++MY + +A ++F M+ KN++SW
Sbjct: 279 CNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISW 338
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T +++ Y+ + A+ + + + + + + +A+L CS +L+LG IH +
Sbjct: 339 TALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVM 398
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV--------------- 175
+ D + L+D+Y KC L R +FD SN +++ +
Sbjct: 399 KLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPM 458
Query: 176 ALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
L+N + L G+ HA+ VK GF+ S+I MY
Sbjct: 459 ILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMY 518
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
KCG I+D +FN M RD +SW +I
Sbjct: 519 AKCGSIEDAHQMFNIMNCRDSISWNALI-------------------------------- 546
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
S Y L+ Q ++++ L + G D +T + L+AC
Sbjct: 547 --------------------SAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQAC-- 584
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-K 384
+ L G+ + + E Y + L DL R G + A+++ R P
Sbjct: 585 -----TYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFP 639
Query: 385 KDVVAWSGLIMGCTKHG 401
K + W L+ C HG
Sbjct: 640 KSTLLWRTLVNVCKLHG 656
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 208/722 (28%), Positives = 347/722 (48%), Gaps = 83/722 (11%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ +++H +K G D+F L+++Y + + A LFD+M ++ V W M+ A
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---DLDLGRLIHERITR-- 133
Y N + A+R ++ + +GF C + G D+ R H +
Sbjct: 793 YVENSFQDEALRFFS------AFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
Query: 134 --EKLEYDT----VLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN----------VAL 177
+ +D N L ++ G + + D + S G+ A+
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAI-DCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L G+Q+HA +K F SL++MY K G + F PE D++SW
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 238 IIVGCFE--------------------------------CSC------FTLSALVDMYS- 258
+I + CS FTL + V +Y+
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 259 NCNVLCE---ARKLFDQYSSWAASAYG----------NVALWNSMISGYVLNEQNEEAIT 305
C ++ + + L D YS ++A WN+++ GY+ + ++ +A+
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
S +H G+ ID T +A+KA L+N Q+ + G+ D V S ++D+
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQ--GKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G++ +ALELF + + D VAW+ +I G ++G A ++ M S +++
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
++++K SCL +L +GKQ+HA VK + + TSL+DMY KCG + D +F+ M
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R VV W +++G Q+G EA+ F+ M + ++P+++TF+GVLSAC H+GL EA+
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F +M YG+ P +EHY C+VD LG+AG +AE +IA MPFK +++ ++L AC T
Sbjct: 1324 FDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG 1383
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWI 664
+ + +A++LLA P D S YV+LSN+YA WD ++ R K K +K G SWI
Sbjct: 1384 DAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWI 1443
Query: 665 EV 666
+V
Sbjct: 1444 DV 1445
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 144/597 (24%), Positives = 255/597 (42%), Gaps = 89/597 (14%)
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------- 163
DL LG+ H RI D L N L+ MY KCGSL R++FD+
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 164 --YSNWAASAYGNV----------------------------ALWNSMLSGGKQVHAFCV 193
Y+ +A S+Y NV L + + + VH + V
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------- 244
K GFE + +L+++Y K G + LF+ MPERD V W ++ E
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 245 -CSCFTLSALVDMYS---------NCNVLCEARKLFDQYSSWAASAY-----GNVALWNS 289
S F S +S N +V ++ +Q ++A + N+ WN
Sbjct: 805 FFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNK 864
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
++ ++ Q AI + S + DS T L A + + + Q+H L++
Sbjct: 865 KLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD--LGEQIHALVIK 922
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
S + V ++L+++Y++ G V +A + F P+ D+++W+ +I ++ L A
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLAS---LRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
FRD++ +QF ++SVL+ CS G QVH + +K G + T+LID+
Sbjct: 983 FRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G++D+ L + D+ SW I+ G ++ ++++A+ +F M + + +EIT
Sbjct: 1043 YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102
Query: 527 LGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ A G +A+ I + G L ++D+ + G +A +L
Sbjct: 1103 ATAIKASGCLINLKQGKQIQAYAI------KLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 582 IAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
E+ +PD+ W +M+ E + +S+ L+ S P +Y + + A+
Sbjct: 1157 FGEIS-RPDEVAWTTMISGYIENGDEDHALSVY--HLMRVSGVQPDEYTFATLIKAS 1210
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 35/248 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A++ G ++KQGK + IK G + D++ + +L MY + +A +LF E++
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R + V+WTTM++ Y N + A+ +Y H++ V+P+ + ++ ++KA S L+ G+
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGK 1220
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + + D + +L+DMY KCGS+ D Y + V WN+ML G
Sbjct: 1221 QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ----DAYRVFRKMDVRKVVFWNAMLLGL 1276
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVG 241
Q G +D+ L LF M + D V++ G++
Sbjct: 1277 AQ--------------------------HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 242 CFECSCFT 249
C F+
Sbjct: 1311 CSHSGLFS 1318
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 208/722 (28%), Positives = 347/722 (48%), Gaps = 83/722 (11%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ +++H +K G D+F L+++Y + + A LFD+M ++ V W M+ A
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---DLDLGRLIHERITR-- 133
Y N + A+R ++ + +GF C + G D+ R H +
Sbjct: 793 YVENSFQDEALRFFS------AFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
Query: 134 --EKLEYDT----VLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN----------VAL 177
+ +D N L ++ G + + D + S G+ A+
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAI-DCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L G+Q+HA +K F SL++MY K G + F PE D++SW
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 238 IIVGCFE--------------------------------CSC------FTLSALVDMYS- 258
+I + CS FTL + V +Y+
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 259 NCNVLCE---ARKLFDQYSSWAASAYG----------NVALWNSMISGYVLNEQNEEAIT 305
C ++ + + L D YS ++A WN+++ GY+ + ++ +A+
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
S +H G+ ID T +A+KA L+N Q+ + G+ D V S ++D+
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQ--GKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G++ +ALELF + + D VAW+ +I G ++G A ++ M S +++
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
++++K SCL +L +GKQ+HA VK + + TSL+DMY KCG + D +F+ M
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R VV W +++G Q+G EA+ F+ M + ++P+++TF+GVLSAC H+GL EA+
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F +M YG+ P +EHY C+VD LG+AG +AE +IA MPFK +++ ++L AC T
Sbjct: 1324 FDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG 1383
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWI 664
+ + +A++LLA P D S YV+LSN+YA WD ++ R K K +K G SWI
Sbjct: 1384 DAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWI 1443
Query: 665 EV 666
+V
Sbjct: 1444 DV 1445
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 144/597 (24%), Positives = 255/597 (42%), Gaps = 89/597 (14%)
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------- 163
DL LG+ H RI D L N L+ MY KCGSL R++FD+
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 164 --YSNWAASAYGNV----------------------------ALWNSMLSGGKQVHAFCV 193
Y+ +A S+Y NV L + + + VH + V
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------- 244
K GFE + +L+++Y K G + LF+ MPERD V W ++ E
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 245 -CSCFTLSALVDMYS---------NCNVLCEARKLFDQYSSWAASAY-----GNVALWNS 289
S F S +S N +V ++ +Q ++A + N+ WN
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNK 864
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
++ ++ Q AI + S + DS T L A + + + Q+H L++
Sbjct: 865 KLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD--LGEQIHALVIK 922
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
S + V ++L+++Y++ G V +A + F P+ D+++W+ +I ++ L A
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLAS---LRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
FRD++ +QF ++SVL+ CS G QVH + +K G + T+LID+
Sbjct: 983 FRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G++D+ L + D+ SW I+ G ++ ++++A+ +F M + + +EIT
Sbjct: 1043 YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102
Query: 527 LGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ A G +A+ I + G L ++D+ + G +A +L
Sbjct: 1103 ATAIKASGCLINLKQGKQIQAYAI------KLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 582 IAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
E+ +PD+ W +M+ E + +S+ L+ S P +Y + + A+
Sbjct: 1157 FGEIS-RPDEVAWTTMISGYIENGDEDHALSVY--HLMRVSGVQPDEYTFATLIKAS 1210
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 35/248 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A++ G ++KQGK + IK G + D++ + +L MY + +A +LF E++
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R + V+WTTM++ Y N + A+ +Y H++ V+P+ + ++ ++KA S L+ G+
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGK 1220
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + + D + +L+DMY KCGS+ D Y + V WN+ML G
Sbjct: 1221 QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ----DAYRVFRKMDVRKVVFWNAMLLGL 1276
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVG 241
Q G +D+ L LF M + D V++ G++
Sbjct: 1277 AQ--------------------------HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 242 CFECSCFT 249
C F+
Sbjct: 1311 CSHSGLFS 1318
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/491 (38%), Positives = 272/491 (55%), Gaps = 30/491 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+HA +K G + TSLI MY + G ++D +F+ RDVVS T +I G
Sbjct: 83 GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG--- 139
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ ARK+FD+ + +V WN+MI+GYV N + EEA+
Sbjct: 140 ------------YASRGDFRSARKVFDEITE------RDVVSWNAMITGYVENGRYEEAL 181
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS----GYELDYIVGS 360
L + + + D T S + AC + + QVH + G+ + +
Sbjct: 182 ELFKEMMRTNVRPDEGTLVSVVSACAQ--SGSIELGRQVHSWVDDDDDDHGFSSSLKIVN 239
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LIDLY++ G+V++A LF L KDVV+W+ LI G T L A LLF++M+ S +
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLA 478
N + SVL C+ L ++ G+ +H + K+ G E TSLIDMY KCG+I+
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M R + SW +I G +GRA A F M +R++P++ITF+G+LSAC H+GL
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ IF SM +Y L P LEHY CM+DLLG +G F +AE++I MP +PD IW S+L
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
KAC+ H N +L A++L+ PE+ YV+LSN+YAT G W+ +++VR G KK
Sbjct: 480 KACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK 539
Query: 659 -AGMSWIEVSS 668
G S IEV S
Sbjct: 540 VPGCSSIEVDS 550
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 62/509 (12%)
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
F L A +F+ + N++ W TM+ + S+ P A+ +Y M+ G + PN + +
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPF 69
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWA 168
+LK+C+ S + GR IH ++ + D + +L+ MY + G L RK+FD
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFD------ 123
Query: 169 ASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLAL 223
AS++ +V ++++G F R E++ V+ ++I Y++ G ++ L L
Sbjct: 124 ASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALEL 183
Query: 224 FNFMPERDVVSWTGIIVGC----------------------------FECSCFTLSALVD 255
F M +V G +V F S ++AL+D
Sbjct: 184 FKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALID 243
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+YS C + A LF+ S +V WN++I GY +EA+ L + SG
Sbjct: 244 LYSKCGDVETAFGLFEGLSC------KDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGE 297
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
C + T S L AC +L + + V+ G + + ++LID+YA+ G++++A
Sbjct: 298 CPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAA 357
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F+ + + + +W+ +I G HG + A+ LF M + + + +L CS
Sbjct: 358 HQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHS 417
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDDGLALFKFMP-ERD 487
L G+Q+ +D LT +ID+ G + + MP E D
Sbjct: 418 GLLDLGRQIFKSMT------QDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPD 471
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
V W ++ C ++G + A ++ Q++I+
Sbjct: 472 GVIWCSLLKACKKHGNLELAESFAQKLIK 500
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 182/494 (36%), Gaps = 152/494 (30%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND------------- 56
L+ C + ++ ++G+ +H +++K G D + +L+SMYA L D
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 57 ------------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
A K+FDE+ +++VSW M+T Y N R A+ L+ M+
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY----DTVLMNTLLDMYVKCG 154
+V P+ +V+ AC+ SG ++LGR +H + + ++ ++N L+D+Y KCG
Sbjct: 191 -NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG------------------------------ 184
+ + + + +V WN+++ G
Sbjct: 250 DVE----TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLL 305
Query: 185 --------------GKQVHAFCVK--RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
G+ +H + K +G E TSLIDMY KCG+I+ +FN M
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
R + SW +I G
Sbjct: 366 YRSLSSWNAMIFG----------------------------------------------- 378
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+ ++ + A L S + + + D TF L AC S L G +
Sbjct: 379 -----FAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC-------SHSGLLDLGRQI 426
Query: 349 TSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
DY + L IDL G K A E+ H +P + D V W L+ C KHG
Sbjct: 427 FKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
Query: 402 LNSLAYLLFRDMIN 415
LA + +I
Sbjct: 487 NLELAESFAQKLIK 500
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 42/336 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIK----YGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+V + C Q SI+ G+ +H + +G S + N L+ +Y+ + A LF
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K++VSW T++ YT A+ L+ ML G PN +VL AC+ G +
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC-PNDVTLLSVLPACAHLGAI 317
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
D+GR IH I + + + +T L +L+DMY KCG + + + + Y +++ WN
Sbjct: 318 DIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEA----AHQVFNSMLYRSLSSWN 373
Query: 180 SMLSG----GKQVHAFCV---KRG--FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ G G+ AF + RG E +D+T L+ G +D G +F M +
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AAS 279
++ GC ++D+ + + EA ++ W A
Sbjct: 434 YNLTPKLEHYGC----------MIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACK 483
Query: 280 AYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GN+ L S + + +N + LLS+I+++
Sbjct: 484 KHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATA 519
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 36/296 (12%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A+ +F + + +++ W+ ++ G A ++ M++ N + +LK C+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF------------ 482
+ G+Q+HA +K G + TSLI MY + G ++D +F
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 483 -------------------MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+ ERDVVSW +I G +NGR +EA+ F+EM+++ ++P+E
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 524 ITFLGVLSACRHAGLVEEAWTIFT---SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
T + V+SAC +G +E + + ++G L+ ++DL + G + A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
L + K D W +++ TH N +++ Q + S E P+ +LS + A
Sbjct: 257 LFEGLSCK-DVVSWNTLIGG-YTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 217/725 (29%), Positives = 351/725 (48%), Gaps = 137/725 (18%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++ SW + + T + AI Y M G+ P+ F + AVLKA S DL G
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGA-RPDNFAFPAVLKAVSGLQDLKTGEQ 113
Query: 127 IHERITREKLEYDTV-LMNTLLDMYVKCGSLTR--KLFDQ------------------YS 165
IH + +V + NTL++MY KCG + K+FD+ +
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173
Query: 166 NW--AASAYGNVALWNSMLSG---------------------GKQVHAFCVKRGFEKEDV 202
W A A+ + + N LS GKQ+H + ++ G +++
Sbjct: 174 KWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTF 232
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT-------------------------- 236
T +L+ MY K G +DD ALF +RD+VSW
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 292
Query: 237 ----GIIVGCFECSC--------------------------FTLSALVDMYSNCNVLCEA 266
G+ + +C F SALVDMY NC +
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSA 325
R++FD + LWN+MISGY N +E+A+ L + I +G+ ++ T S
Sbjct: 353 RRVFDHILGR------RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 406
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
+ AC++ F+++ + +HG V G++ D V + L+D+Y+R+G + + +F + +
Sbjct: 407 MPACVHCEAFSNKES--IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR 464
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDM-----------------INSNQDVNQFIISSV 428
D V+W+ +I G G S A +L +M N + +V
Sbjct: 465 DRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTV 524
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERD 487
L C+ LA++ +GK++HA+ + R DIT+ ++L+DMY KCG ++ +F MP ++
Sbjct: 525 LPGCAALAAIAKGKEIHAYAI-RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 583
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQS-----RLKPNEITFLGVLSACRHAGLVEEA 542
V++W +I+ CG +G+ +EA+ F+ M+ KPNE+TF+ V +AC H+GL+ E
Sbjct: 584 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 643
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKAC 601
+F MK ++G+EP +HY C+VDLLG+AG ++A +L+ MP + DK W+S+L AC
Sbjct: 644 LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 703
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
H N +L + A+ LL P S YV+LSN+Y++ G+W+ +VRK +++G KK G
Sbjct: 704 RIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPG 763
Query: 661 MSWIE 665
SWIE
Sbjct: 764 CSWIE 768
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 145/355 (40%), Gaps = 66/355 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ A HC + +S+H +K G +D + N L+ MY+ ++ + +FD M
Sbjct: 406 VMPACVHC---EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSME 462
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY----------------GSVEPNGFMYS 109
++ VSW TM+T Y + R + A+ L + M G +PN
Sbjct: 463 VRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLM 522
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNW 167
VL C+ + G+ IH R L D + + L+DMY KCG +L+R++F++ N
Sbjct: 523 TVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN- 581
Query: 168 AASAYGNVALWNSMLSG----GKQVHAFCV--------KRGFEKEDVTLTSLIDMYLKC- 214
NV WN ++ GK A + RG E + +T I ++ C
Sbjct: 582 -----KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVT-FITVFAACS 635
Query: 215 --GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL--- 269
G I +GL LF M V T C +VD+ L EA +L
Sbjct: 636 HSGLISEGLNLFYRMKHDHGVEPTSDHYAC----------VVDLLGRAGQLEEAYELVNT 685
Query: 270 ----FDQYSSW-----AASAYGNVALWNSMISGYVLNEQNEEA-ITLLSHIHSSG 314
FD+ +W A + NV L + E N + LLS+I+SS
Sbjct: 686 MPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSA 740
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P + +W + T+ A + +M S + F +VLK S L L+ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 443 QVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
Q+HA VK G+ +T+ +L++MY KCG I D +F + +RD VSW I +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
+ ++A+ F+ M ++ + T + V AC + G++
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 203/651 (31%), Positives = 329/651 (50%), Gaps = 36/651 (5%)
Query: 29 IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA 88
IIK GL + L+S++ F SL++A ++F + K + TM+ Y N + A
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
+ + M Y V P + ++ +LK C + DL G+ IH ++ + M +++
Sbjct: 160 VSFFCRM-RYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218
Query: 149 MYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAFCVK---RGFEK 199
MY KC R + + Y + ++ WN+++SG GK ++ G
Sbjct: 219 MYAKC----RLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRP 274
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ +T+ S++ G + G ++ + + FE +ALVDMYS
Sbjct: 275 DSITIVSILPAVADVGSLRIGRSIHGYS-----------MRAGFESFVNVSTALVDMYSK 323
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
C + AR +FD+ + V WNSMI GYV N A+ + + + + +
Sbjct: 324 CGSVGTARLIFDRMTG------KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTN 377
Query: 320 YTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T AL AC +L + RF VH L+ D V ++LI +Y++ V A E+
Sbjct: 378 VTVMGALHACADLGDVEQGRF---VHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEI 434
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F L K +V+W+ +I+G ++G + A F M N + F + SV+ + L+ L
Sbjct: 435 FENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVL 494
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+ K +H ++ +K T+L+DMY KCG + LF M ER V +W +I G
Sbjct: 495 PQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGY 554
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
G +G K A+ F++M + +KPNE+TFL VLSAC H+GLVEE + F SMK +YGLEP
Sbjct: 555 GTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPA 614
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
++HY MVDLLG+A ++A I +MP +P +++ +ML AC H N +L A ++
Sbjct: 615 MDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIF 674
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
P+D +V+L+N+YAT MWD +++VR +K G +K G S +E+ +
Sbjct: 675 DLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQN 725
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 225/500 (45%), Gaps = 38/500 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG +++GK +HC++I G + ++F +++MYA + +A+K+FD M +++
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDL 241
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W T+++ Y N A+ L M E G P+ ++L A + G L +GR IH
Sbjct: 242 VCWNTIISGYAQNGFGKTALELVLRMQEEGK-RPDSITIVSILPAVADVGSLRIGRSIHG 300
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R E + L+DMY KCGS+ R +FD+ + V WNSM+ G
Sbjct: 301 YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG------KTVVSWNSMIDGYVQ 354
Query: 185 ----GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G + F + E +VT+ + G+++ G + + + ++ S +
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+++L+ MYS C + A ++F+ + + WN+MI GY N
Sbjct: 415 -----------MNSLISMYSKCKRVDIAAEIFENLQ------HKTLVSWNAMILGYAQNG 457
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ EAI + + DS+T S + A L A +HGL++ + + + V
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ--AKWIHGLVIRTCLDKNVFV 515
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+YA+ G V +A +LF + ++ V W+ +I G HGL A LF M
Sbjct: 516 ATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVI 575
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGL 477
N+ VL CS + G Q K G E +++D+ + +++
Sbjct: 576 KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAW 635
Query: 478 ALFKFMPERDVVSWTGIIVG 497
+ MP +S G ++G
Sbjct: 636 DFIQKMPIEPAISVFGAMLG 655
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 41/276 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L S++ G+S+H ++ G + L+ MY+ S+ A +FD M
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K +VSW +M+ Y N P A+ ++ M++ VE L AC+ GD++ GR
Sbjct: 339 GKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD-EQVEMTNVTVMGALHACADLGDVEQGR 397
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYG----- 173
+H+ + + +L D +MN+L+ MY KC + ++F+ + W A G
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNG 457
Query: 174 ----------NVALWN------------------SMLSGGKQVHAFCVKRGFEKEDVTLT 205
+ L N S+L K +H ++ +K T
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT 517
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+L+DMY KCG + LF+ M ER V +W +I G
Sbjct: 518 ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDG 553
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ AL C ++QG+ +H + + L D+ N+L+SMY+ ++ A ++F+ +
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K +VSW M+ Y N R N AI + M + +++P+ F +V+ A + L +
Sbjct: 440 HKTLVSWNAMILGYAQNGRINEAIDYFCKM-QLQNIKPDSFTMVSVIPALAELSVLPQAK 498
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH + R L+ + + L+DMY KCG++ RKLFD +V WN+M+
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDER------HVTTWNAMID 552
Query: 184 G------GK---QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G GK ++ K + +VT ++ G +++G F M ++D
Sbjct: 553 GYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSM-KKDY-- 609
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
E + A+VD+ N L EA
Sbjct: 610 -------GLEPAMDHYGAMVDLLGRANRLNEA 634
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 333/652 (51%), Gaps = 31/652 (4%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HC IK G DI+ N +L Y F L A+ LFDEM +++ VSW TM++ YTS +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A L+ M GS + +G+ +S +LK + DLG +H + + E + + ++
Sbjct: 83 EDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
L+DMY KC ++ D + + + N WN++++G QV +K F L
Sbjct: 142 LVDMYAKC----ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRD--IKTAF-----WLL 190
Query: 206 SLIDM----YLKCGEIDDGLALFN---FMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
L++M + G L L + F V + +G + +A++ Y+
Sbjct: 191 GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG-LQHEITICNAMISSYA 249
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+C + +A+++FD ++ WNSMI+G+ +E E A L + + D
Sbjct: 250 DCGSVSDAKRVFD-----GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETD 304
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL--GNVKSAL 376
YT+T L AC + F +HG+++ G E + LI +Y + G ++ AL
Sbjct: 305 IYTYTGLLSACSG--EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF L KD+++W+ +I G + GL+ A F + +S V+ + S++L+ CS LA
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGII 495
+L+ G+Q+HA K GF + ++SLI MY KCG I+ F+ + + V+W +I
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
+G Q+G + ++ F +M +K + +TF +L+AC H GL++E + M+P Y +
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 542
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
+P +EHY VDLLG+AG + A++LI MP PD + + L C ++ + +A
Sbjct: 543 QPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVAN 602
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
LL PED YV LS++Y+ L W+ + V+K K+ G KK G SWIE+
Sbjct: 603 HLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/584 (21%), Positives = 241/584 (41%), Gaps = 146/584 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H +IK G +++ G++L+ MYA + DA + F E++ N VSW ++ +
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A L M +V + ++ +L +L + +H ++ + L+++
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 142 LMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N ++ Y CGS++ +++FD ++ WNSM++G
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFD-----GLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK-- 213
GK +H +K+G E+ +LI MY++
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
G ++D L+LF + +D++SW II G F L + +A K F
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITG------FAQKGLSE---------DAVKFF--- 396
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
S++ SS + +D Y F++ L++C +L
Sbjct: 397 ----------------------------------SYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSG 392
+ Q+H L SG+ + V S+LI +Y++ G ++SA + F ++ K VAW+
Sbjct: 423 TL--QLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I+G +HGL ++ LF M N N ++ +++L CS H ++ G
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS-----------HTGLIQEG 529
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E L +L++ ++K P + + + G+ G +A +
Sbjct: 530 LE-----LLNLME------------PVYKIQPRME--HYAAAVDLLGRAGLVNKA----K 566
Query: 513 EMIQS-RLKPNEI---TFLGVLSACRHAGLVEEAWTIFTSMKPE 552
E+I+S L P+ + TFLGV AC + + ++PE
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE 610
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN- 68
LR C +++ G+ +H K G + F ++L+ MY+ + A K F +++ K+
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
V+W M+ Y + ++ L++ M +V+ + ++A+L ACS +G + G
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQ-NVKLDHVTFTAILTACSHTGLIQEG 529
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 215/701 (30%), Positives = 340/701 (48%), Gaps = 99/701 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS-----LNDAHKLFDEM 64
L+ C + G+++H R +K GL + NNLLS YA + +A +LFDE+
Sbjct: 30 LQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEI 89
Query: 65 --ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
A++N+ +W ++++ Y + R A ++ M E V S + L+
Sbjct: 90 PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPV-------SWTVMVVGLNRVGR 142
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSM 181
G I LDM S T+ L + S+ AA+ V
Sbjct: 143 FGEAI----------------KMFLDMVTDGLSPTQFTLTNVLSSCAATEARGV------ 180
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
G++VH+F VK G S+++MY KCG+ + A+F MPER V SW
Sbjct: 181 ---GRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSW------ 231
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+A+V + ++ + A LF+ + WN++I+GY N N
Sbjct: 232 ---------NAMVSLDAHLGRMDLALSLFENMPD------RTIVSWNAVIAGYNQNGLNA 276
Query: 302 EAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-------- 352
+A+ S + S S M D +T TS L AC NL + QVH I+ S
Sbjct: 277 KALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVS--IGKQVHAYILRSRMPYIGQVTN 334
Query: 353 -------------------------ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
+L+ I + L++ Y +LG++K A E+F + +DV
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
VAW+ +I+G ++G N A LFR MI S + N + +++VL VC+ LA L GKQ+H
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKE 506
++ E+ S++ MY + G + +F + ++ V+WT +IV Q+G ++
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F+EM++ +KP+ ITF+GVLSAC H G V+E F ++ ++G+ P + HY CMV
Sbjct: 515 AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMV 574
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLL +AG F +A++ I +MP +PD W S+L AC H N L + AE+LL+ P +
Sbjct: 575 DLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSG 634
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
Y LSNVY+ G W+ +K+ K K K +K+ G SW +
Sbjct: 635 AYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHI 675
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 212/529 (40%), Gaps = 120/529 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA---------------- 49
+ L C + G+ +H ++K GLS + N++L+MY
Sbjct: 165 LTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMP 224
Query: 50 --DFTSLN-----DAH--------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
+S N DAH LF+ M + IVSW ++ Y N A+ ++
Sbjct: 225 ERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSR 284
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
ML Y ++ P+ F ++VL AC+ G + +G+ +H I R ++ Y + N L+ MY K G
Sbjct: 285 MLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSG 344
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
S+ R + Q A A NV ++ T+L++ Y+
Sbjct: 345 SVENARGVMQQ----AVMADLNV--------------------------ISFTALLEGYV 374
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
K G++ +F+ M RDVV+WT +IVG
Sbjct: 375 KLGDMKHAREMFDVMSNRDVVAWTAMIVG------------------------------- 403
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
Y N N+EA+ L + SG +SYT + L C +L
Sbjct: 404 ---------------------YEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASL 442
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
+ Q+H + S E V ++++ +YAR G++ A +F R+ +K+ V W+
Sbjct: 443 ACLE--YGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWT 500
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVK 450
+I+ +HGL A LF +M+ ++ VL C+ + + GK+ K
Sbjct: 501 SMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDK 560
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G E ++D+ + G + + MP E D ++W ++ C
Sbjct: 561 HGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSAC 609
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C ++ GK +HC+ I+ Q N++++MYA SL A ++FD +
Sbjct: 432 VAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVH 491
Query: 66 -RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
RK V+WT+M+ A + A+ L+ ML G V+P+ + VL AC+ G +D G
Sbjct: 492 WRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVG-VKPDRITFVGVLSACTHVGFVDEG 550
Query: 125 RLIHERIT-REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW--AASAYGNVALWNSM 181
+ +++ + + + ++D+ + G LF + + + W S+
Sbjct: 551 KRYFQQLQDKHGIVPEMSHYACMVDLLARAG-----LFSEAQEFIQQMPVEPDAIAWGSL 605
Query: 182 LSGGKQVH--AFCVKRGFEK-------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
LS + VH A + EK ++L ++Y CG +D ++ ++ V
Sbjct: 606 LSACR-VHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSV 664
Query: 233 VSWTG 237
TG
Sbjct: 665 KKETG 669
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 327/656 (49%), Gaps = 41/656 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQD---IFTGNNLLSMYADFTSLNDAH 58
++ R L H RS+ + K LH I GL I ++L YA + A
Sbjct: 78 NVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLAR 137
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
KLFD+++ ++ W ++ Y A+R+++ M+ G P+ + + V+KACS+
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVM 197
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVA 176
L++G LIH R + + N+LL MY+ CG L R++F+ +V
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFN------VMLKRSVV 251
Query: 177 LWNSMLSG----GKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+M+SG G+ A V E + T+ S + E++ G+ + +
Sbjct: 252 SWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLV 311
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
+ + + +ALVDMYS C + EA +F A + +V W
Sbjct: 312 QKNHLQEKIEV-----------RNALVDMYSRCGGMDEASLVF------AETKEKDVITW 354
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
SMI+GY++N + A+ L + G+ ++ T S L AC +L +L H +
Sbjct: 355 TSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSL--HAWV 412
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + D +V + LID+YA+ V + ++F + K V W+ L+ G + L A
Sbjct: 413 MRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAV 472
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF+ M+ + N +SV+ + LA L++ +H++ V+ GF + +T LIDMY
Sbjct: 473 GLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMY 532
Query: 468 LKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
KCG +D +F +P E+D++ W+ +I G G +G + A+ F +M+ S ++PNEIT
Sbjct: 533 SKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEIT 592
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F VL AC H GLV++ T+F M Y P HY C+VDLLG+AG D+A LI M
Sbjct: 593 FTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSM 652
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
PF+ + +IW ++L AC H N +L + AE+L PE Y++L+N+YA +G W
Sbjct: 653 PFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRW 708
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 336/697 (48%), Gaps = 111/697 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H +++ G D+F N LL+MY L A
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR--------- 116
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
RL++ M E V + +++A + GD + +
Sbjct: 117 ----------------------RLFDRMPERNMVS-----FVTLVQAHAQRGDFEAAAAL 149
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
R+ E E + ++ T+L + + A A G L+GG
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAI----------------AMDAAG--------LAGG-- 183
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--- 244
VH+ K G + + LID Y C + D +FN + +D V WT + V C+
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM-VSCYSEND 242
Query: 245 -----------CSCFTLS-----------------------ALVDMYSNCNVLCEARKLF 270
CS +S AL+DMY+ C + +AR F
Sbjct: 243 CPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAF 302
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ Y +V L + MIS Y + QNE+A L + S + + Y+ +S L+AC
Sbjct: 303 EMIP------YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 356
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
N++ + F Q+H + G+E D VG+ L+D YA+ ++ S+L++F L + V+W
Sbjct: 357 NMVQLD--FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 414
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +++G ++ GL A +F +M + Q SSVL+ C+ AS+R Q+H K
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
F + + SLID Y KCG I D L +F+ + ERD++SW II G +G+A +A+
Sbjct: 475 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 534
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F M +S ++ N+ITF+ +LS C GLV ++F SM+ ++G++P +EHY C+V LLG
Sbjct: 535 FDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLG 594
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG +DA Q I ++P P +W ++L +C H N L AE++L P+D + YV+
Sbjct: 595 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 654
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
LSN+YA G D ++ +RK+ + +G +K G+SW+E+
Sbjct: 655 LSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEI 691
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKS 374
+DS+ L+ CI ++R VHG +V G LD + L+++Y +LG + S
Sbjct: 57 VDSFACARQLQGCI--ARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A LF R+P++++V++ L+ + G A LFR + +VNQF+++++LK+
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ + VH+ K G + + LID Y C + D +F + +D V WT +
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 495 I 495
+
Sbjct: 235 V 235
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 208/691 (30%), Positives = 346/691 (50%), Gaps = 94/691 (13%)
Query: 12 HCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD--FTSLNDAHKLFDEMARKNI 69
H + ++IKQ + ++I G +D F + LL + F ++N ++++F + N
Sbjct: 32 HLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNG 91
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS-GDLDLGRLIH 128
TM+ Y P AI +Y MLE +V + + Y + ++CS+ + D G+ I
Sbjct: 92 FICNTMMKGYMQRNSPCKAIWVYKFMLE-SNVAADNYTYPILFQSCSIRLAEFD-GKCIQ 149
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + + + D + NTL++MY CG+L+ RK+FD S+ ++ WNSML+G
Sbjct: 150 DHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFD------GSSVLDMVSWNSMLAG-- 201
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
Y+ G +++ +++ MPER+V++ +IV
Sbjct: 202 ------------------------YVLVGNVEEAKDVYDRMPERNVIASNSMIV------ 231
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
++ + EA KLF++ ++ W+++IS Y NE EEA+ L
Sbjct: 232 ---------LFGKKGNVEEACKLFNEMKQ------KDLVSWSALISCYEQNEMYEEALIL 276
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE------------- 353
++++G+ +D S L AC LL + VHGL+V G E
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVIT--GKLVHGLVVKVGIETYVNLQNALIHMY 334
Query: 354 ------------------LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
LD I +++I Y + G ++ A LF +P KD V+WS +I
Sbjct: 335 SSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMIS 394
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G + + +LF++M ++ I+ SV+ C+ LA+L +GK +HA+ K G +
Sbjct: 395 GYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI 454
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
I T+LI+MY+K G ++D L +FK + E+ V +W +I+G NG +++ F EM
Sbjct: 455 NIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMK 514
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ + PNEITF+ VL ACRH GLV+E F SM E+ + P+++HY CMVDLLG+AG
Sbjct: 515 EHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGML 574
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+AE+LI MP PD + W ++L AC+ + + + I +L+ P+ V+LSN+Y
Sbjct: 575 KEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIY 634
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
A+ G W + +VR ++ G K G S IE
Sbjct: 635 ASKGNWVDVLEVRGMMRQHGVVKTPGCSMIE 665
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 154/390 (39%), Gaps = 65/390 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C + + GK +H ++K G+ + N L+ MY+ + A KLF E
Sbjct: 292 VLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC 351
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV------------------------ 101
+ +SW +M++ Y A L++ M + +V
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQE 411
Query: 102 ------EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+P+ + +V+ AC+ LD G+ IH I + L+ + +L TL++MY+K G
Sbjct: 412 MQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGC 471
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFC--VKRGFEKEDVTLTS 206
+ D + V+ WN+++ G K + F + G ++T +
Sbjct: 472 VE----DALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVA 527
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
++ G +D+G FN M + + GC +VD+ +L EA
Sbjct: 528 VLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGC----------MVDLLGRAGMLKEA 577
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISG---YVLNEQNEEAITLLSHIHS--SGMCIDSYT 321
+L + + +V+ W +++ Y NE E L +H G +
Sbjct: 578 EELIE-----SMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSN 632
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSG 351
++ +++L R ++ HG++ T G
Sbjct: 633 IYASKGNWVDVLEV--RGMMRQHGVVKTPG 660
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 219/721 (30%), Positives = 345/721 (47%), Gaps = 125/721 (17%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R AL RS+++GK+LH +IIK S ++ N+L+++YA L +A +F+
Sbjct: 7 RSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFER 65
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+ K++VSW ++ Y S P+ + +H++E
Sbjct: 66 IQNKDVVSWNCIINGY-SQHGPSGS----SHVME-------------------------- 94
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+ +R+ E NT + + G T AAS + A
Sbjct: 95 ---LFQRMRAE---------NTAPNAHTFAGVFT----------AASTLVDAA------- 125
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---- 239
GG+ HA +K ++ +SL++MY K G + +F+ MPER+ VSW +I
Sbjct: 126 GGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA 185
Query: 240 --------VGCFEC-----------------SCFTL------------------------ 250
+G F S TL
Sbjct: 186 SQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVS 245
Query: 251 --SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ALV MY+ C L +A + F+ S+ N W++MI+GY + +++A+ L S
Sbjct: 246 VGNALVTMYAKCGSLDDALQTFE------TSSDKNSITWSAMITGYAQSGDSDKALKLFS 299
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+H SG+ +TF + AC +L + QVH ++ G+E V + L+D+YA+
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDL--GAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAK 357
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
++ A + F L + D+V W+ +I G ++G N A L+ M N+ ++SV
Sbjct: 358 CSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASV 417
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
LK CS LA+L +GKQ+HA VK GF E ++L MY KCG + DG +F+ MP RDV
Sbjct: 418 LKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDV 477
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
+SW +I G QNG KEA+ F+EM KP+ +TF+ +LSAC H GLVE W F
Sbjct: 478 ISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRM 537
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M E+G++P +EHY CMVD+L +AG +A + +W +L AC + N +
Sbjct: 538 MFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYE 597
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
L + E+L+ ++ S YV+LS++Y+ LG W+ + +VR+ K G K+ G SWIE+
Sbjct: 598 LGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELK 657
Query: 668 S 668
S
Sbjct: 658 S 658
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 328/665 (49%), Gaps = 83/665 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +S+ +G+ LH II G Q L++ Y+ F L DAH + +
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W ++++Y NGF A+ +
Sbjct: 237 ILHPFPWNLLISSYVR----------------------NGFCQKALSA---------YKQ 265
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
++ + I + Y +VL CG L G
Sbjct: 266 MVKKGIRPDNFTYPSVLK--------ACGEELD-----------------------LGFG 294
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
K+VH + + +LI MY KCG++ LF+ +PERD VSW
Sbjct: 295 KEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSW---------- 344
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++++ +Y++ + EA +LF S WA N+ +WN++ GY+ + A+
Sbjct: 345 -----NSMISVYASMGMWNEAFELFG--SMWAEDIELNIIIWNTIAGGYLRTGNYKGALE 397
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
LLS + G +DS L AC ++ +++ ++H + S + V ++LI +
Sbjct: 398 LLSQMRKXGSHLDSVALIIGLGACSHI--GDAKLGKEIHSFAIRSCFGEVDTVKNSLITM 455
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y+R ++K A LF + K +++W+ +I GC + A L R+M+ S + N I
Sbjct: 456 YSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTI 515
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMP 484
+SVL +C+ +A+L+ GK+ H + +R K+ + L +L+DMY + G++ + +F +
Sbjct: 516 ASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLG 575
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ERD +++T +I G G G + A+ F+EM ++KP+ IT + VLSAC H+GLV +
Sbjct: 576 ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQL 635
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+F M+ YGL PHLEH+ CM DL G+AG + A+++I MP+KP +WA+++ AC H
Sbjct: 636 LFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 695
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSW 663
NT++ AE+LL PE+P YV+++N+YA G W+ L+KVR + LG +KA G +W
Sbjct: 696 RNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAW 755
Query: 664 IEVSS 668
++V +
Sbjct: 756 VDVGT 760
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 40/261 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C K GK +H I+ + N+L++MY+ L A+ L
Sbjct: 409 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLL 468
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M K+++SW ++++ R A L ML G +EPN ++VL C+ +
Sbjct: 469 FQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSG-IEPNYVTIASVLPLCARVAN 527
Query: 121 LDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
L G+ H +TR + D +L+ N L+DMY + G + R++FD
Sbjct: 528 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFD--------------- 572
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF----NFMPERDVV 233
ML E++ +T TS+I Y GE L LF NF + D +
Sbjct: 573 ---MLG--------------ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 615
Query: 234 SWTGIIVGCFECSCFTLSALV 254
+ ++ C T L+
Sbjct: 616 TMIAVLSACSHSGLVTQGQLL 636
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+++QD+ ISS+L C+ + SL G+Q+H + GFE+ I + L+ Y +
Sbjct: 167 SASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLV 226
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D + + W +I +NG ++A++ +++M++ ++P+ T+ VL AC
Sbjct: 227 DAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACG 286
Query: 535 HA---GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
G +E + + ++ L H ++ + G+ G A L ++P + D
Sbjct: 287 EELDLGFGKEVHESINASRIKWSLIVH----NALISMYGKCGKVGIARDLFDKIPER-DA 341
Query: 592 TIWASML 598
W SM+
Sbjct: 342 VSWNSMI 348
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 299/641 (46%), Gaps = 136/641 (21%)
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
R +H R+ + + + N L+D+Y KCG L RK+FD+ S
Sbjct: 43 ARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS---------------- 86
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV- 240
E+ + S+I ++ G +D+ LF+ MPE+D SW +I
Sbjct: 87 ----------------ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAG 130
Query: 241 -------------------------------GCFECS----------------------- 246
G CS
Sbjct: 131 FAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLD 190
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F S L+D YS C ++ AR++FD NV WN +I+ Y N EA+
Sbjct: 191 VFMGSGLIDFYSKCGLVGCARRVFDGMEE------KNVVSWNCLITCYEQNGPAIEALEA 244
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDL 365
+ G D T S + AC L F +Q+H +V S + D I+G+ L+D+
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKE--GVQIHARVVKSDKFRNDLILGNALVDM 302
Query: 366 YARLGNVKSALELFHRLP-------------------------------KKDVVAWSGLI 394
YA+ G V A +F R+P +KD+V+W+ LI
Sbjct: 303 YAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALI 362
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF- 453
G T++G N A LFR + + + ++L + LA L G+Q H+ VK GF
Sbjct: 363 AGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR 422
Query: 454 ----EKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
E+ DI + SLIDMY+KCG +++GL +F+ M E+D VSW +I+G QNG EA+
Sbjct: 423 FQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEAL 482
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
FQ+M++S KP+ +T +G L AC HAGLVEE F SM E+GL P +HY CMVDL
Sbjct: 483 ELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDL 542
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGC ++A+ LI MP +PD +W+S+L AC+ H N L +AE++ P Y
Sbjct: 543 LGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPY 602
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
V+L+N+Y+ LG W VRK ++ G K+ G SWI++ S
Sbjct: 603 VLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQS 643
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 245/574 (42%), Gaps = 120/574 (20%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS- 71
C + RS + +S+H R+I+ +++F N L+ +Y L+ A K+FD M+ +N+ S
Sbjct: 34 CVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSF 93
Query: 72 ------------------------------WTTMVTAYTSNKR----PNWAIRLYNHMLE 97
W +M+ + + R +W +R++
Sbjct: 94 NSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFV 153
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--S 155
N + + + L ACS DL LG IH I++ K D + + L+D Y KCG
Sbjct: 154 L-----NDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLS-------------------------------- 183
R++FD NV WN +++
Sbjct: 209 CARRVFDGMEE------KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 184 ------------GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPER 230
G Q+HA VK + D+ L +L+DMY KCG +++ +F+ MP R
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ VS T ++ G Y+ + AR +F A ++ WN++
Sbjct: 323 NAVSETTMVSG---------------YAKSASVKAARSMF------ATIKQKDIVSWNAL 361
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL----LNFNSRFALQVHGL 346
I+GY N +NEEA+ L + +C YTF + L A NL L + + HG
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
SG E D VG++LID+Y + G+V+ L +F + +KD V+W+ +I+G ++G A
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLID 465
LF+ M+ S + + + L CS + G++ + + G T ++D
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVD 541
Query: 466 MYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGC 498
+ + G +++ L + MP++ D V W+ ++ C
Sbjct: 542 LLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSAC 575
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 188/476 (39%), Gaps = 143/476 (30%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C + + +K G +H I K S D+F G+ L+ Y+ + A ++FD M KN
Sbjct: 162 GLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKN 221
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++T Y N A+ + M E G +P+ ++V+ AC+ G IH
Sbjct: 222 VVSWNCLITCYEQNGPAIEALEAFGRMTELG-FKPDEVTLASVVSACATLAAFKEGVQIH 280
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------YSNWAASA-- 171
R+ + +K D +L N L+DMY KCG + R +FD+ S +A SA
Sbjct: 281 ARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASV 340
Query: 172 -----------YGNVALWNSMLSG------------------------------------ 184
++ WN++++G
Sbjct: 341 KAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNAS 400
Query: 185 --------GKQVHAFCVKRGF-----EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPER 230
G+Q H+ VK GF E+ D+ + SLIDMY+KCG +++GL +F M E+
Sbjct: 401 ANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEK 460
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D VSW +I+G +A + YG
Sbjct: 461 DHVSWNTMIIG----------------------------------YAQNGYGM------- 479
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQV---HG 345
EA+ L + SG D T L AC L+ R+ + HG
Sbjct: 480 -----------EALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHG 528
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKH 400
L+ + + ++DL R G ++ A +L +PK+ D V WS L+ C H
Sbjct: 529 LLPVKDHY------TCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH 578
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 33/302 (10%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
DS F L C+ L + SR A VHG ++ + + + + + LID+Y + G + A +
Sbjct: 23 DSSPFAKLLDLCVKLRS--SRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARK 80
Query: 378 LFHR-------------------------------LPKKDVVAWSGLIMGCTKHGLNSLA 406
+F R +P+KD +W+ +I G +H A
Sbjct: 81 VFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEA 140
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
F M + +N + S L CS L L+ G Q+H K + + + LID
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG + +F M E++VVSW +I QNG A EA+ F M + KP+E+T
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTL 260
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
V+SAC +E I + L +VD+ + G ++A + MP
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Query: 587 FK 588
+
Sbjct: 321 VR 322
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 22 GKSLHCRIIKYGL------SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
G+ H ++K+G DIF GN+L+ MY S+ + ++F+ M K+ VSW TM
Sbjct: 409 GRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTM 468
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
+ Y N A+ L+ MLE G +P+ L ACS +G ++ GR +T+E
Sbjct: 469 IIGYAQNGYGMEALELFQKMLESGE-KPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEH 527
Query: 136 LEYDTVLMNT-LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH--- 189
T ++D+ + G L + L + + +W+S+LS K VH
Sbjct: 528 GLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP-----DAVVWSSLLSACK-VHRNI 581
Query: 190 ---AFCVKRGFEKEDVT---LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ ++ FE + + L +MY + G D +++ M R VV G
Sbjct: 582 TLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPG 635
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 213/661 (32%), Positives = 316/661 (47%), Gaps = 99/661 (14%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA--DFTSLNDAHKLFDEMARKNIVSWTT 74
+S + K +H +IIK GL F + L+ A F +L+ A LF+ + + N W T
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNT 102
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M+ + + P AI Y ML G VEPN + + +LK+C+ G G+ IH + +
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCG-VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKL 161
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
LE D + +L++MY + G L Y + S L
Sbjct: 162 GLESDPFVHTSLINMYAQNGEL--------------GYAELVFSKSSL------------ 195
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
++ V+ T+LI Y G +DD LF +P RD VSW +I G
Sbjct: 196 ----RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG------------- 238
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
Y + + EEA+ + +
Sbjct: 239 ---------------------------------------YAQSGRFEEALAFFQEMKRAN 259
Query: 315 MCIDSYTFTSALKAC-----INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + T + L AC + L N+ R ++ HGL G L + + LID+Y++
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNW-VRSWIEDHGL----GSNLRLV--NALIDMYSKC 312
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G++ A +LF + +KD+++W+ +I G + A LFR M SN + N S+L
Sbjct: 313 GDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDV 488
C+ L +L GK +HA+ K+ + +L TSLIDMY KCG I+ +F M + +
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
SW +I G +G A A+ F++M +P++ITF+GVLSAC HAGLVE F+S
Sbjct: 433 GSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M +Y + P L+HY CM+DLLG+AG FD+AE L+ M KPD IW S+L AC H N +
Sbjct: 493 MVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
L A+ L PE+P YV+LSN+YAT G WD ++++R G KK G S IEV
Sbjct: 553 LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVD 612
Query: 668 S 668
S
Sbjct: 613 S 613
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 179/440 (40%), Gaps = 77/440 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + ++GK +H ++K GL D F +L++MYA L A +F + + ++
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM------------------------------LEYG 99
VS+T ++T YT + A RL+ + ++
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
+V PN VL AC+ SG L+LG + I L + L+N L+DMY KCG L
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSLI 208
R LF+ ++ WN M+ G ++++ + E DVT S++
Sbjct: 319 RDLFEGICE------KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
G +D G + ++ ++ +G S +T +L+DMY+ C + A++
Sbjct: 373 PACAYLGALDLGKWIHAYIDKK--------FLGLTNTSLWT--SLIDMYAKCGNIEAAKQ 422
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F A ++ WN+MISG ++ A+ L + G D TF L A
Sbjct: 423 VF------AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRL 382
C S L G S DY + L IDL R G A L +
Sbjct: 477 C-------SHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM 529
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
K D W L+ C HG
Sbjct: 530 EMKPDGAIWGSLLGACRVHG 549
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C Q S++ G + I +GL ++ N L+ MY+ L+ A LF+ +
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+I+SW M+ Y+ A+ L+ M + +VEPN + ++L AC+ G LDLG+
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGK 385
Query: 126 LIHERITREKLEY-DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
IH I ++ L +T L +L+DMY KCG++ +++F A ++ WN+M+
Sbjct: 386 WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVF------AGMKPKSLGSWNAMI 439
Query: 183 SG----GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
SG G A + R GFE +D+T ++ G ++ G F+ M E +
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW-----AASAYGNVALWN 288
S GC L ++ L + ++ + W A +GNV L
Sbjct: 500 SPKLQHYGCM----IDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGE 555
Query: 289 SMISG-YVLNEQNEEAITLLSHIHSSG 314
+ L +N A LLS+I+++
Sbjct: 556 FAAKHLFELEPENPGAYVLLSNIYATA 582
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 329/622 (52%), Gaps = 37/622 (5%)
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
+LFDEM +++ VSW TM++ YTS + + L+ M G +G+ +S +LK + +
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCY-VDGYSFSRLLKGIASA 60
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
DLG +H + + E + + ++L+DMY KC ++ D + + N W
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKC----ERVEDAFGAFMEILEPNSVSW 116
Query: 179 NSMLSGGKQVH----AFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
N++++G QV AF + K +D T L+ + +DD + N +
Sbjct: 117 NALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTL------LDDPM-FCNLLK 169
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ V + +G E +A++ Y+NC ++ +A+++FD ++ WN
Sbjct: 170 Q---VHAKVLKLG-LEHEITICNAMISSYANCGLVSDAKRVFD-----GLGGSKDLISWN 220
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
SMI+G +EQ E A L + +H + + D YT+T + AC + F +HGL++
Sbjct: 221 SMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSG--EEHQSFGKSLHGLVI 278
Query: 349 TSGYELDYIVGSNLIDLYARL--GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
G E V + LI +Y + G +K AL LF L KD+V+W+ ++ G +++GL+ A
Sbjct: 279 KKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDA 338
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
FR + +SN +V+ + S+VL+ CS LA+L+ G+Q HA K FE + +SLI M
Sbjct: 339 VKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILM 398
Query: 467 YLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
Y KCG I++ F+ + + + ++W +I+G Q+G + ++ F +M +K + +T
Sbjct: 399 YSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVT 458
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F +L+AC H GL++E + SM+P Y ++P +EHY VDLLG+AG + ++LI M
Sbjct: 459 FTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESM 518
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P PD + + L C ++ + +A LL PED YV LS++Y+ L W+ +
Sbjct: 519 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKA 578
Query: 646 KVRKAGKKLGEKK-AGMSWIEV 666
V+K K+ G KK G SWIE+
Sbjct: 579 NVKKMMKERGVKKVPGWSWIEI 600
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/596 (20%), Positives = 235/596 (39%), Gaps = 146/596 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ + G+ +H ++K G +++ G++L+ MYA + DA F E+ N
Sbjct: 54 LKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNS 113
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ + + A L M +V + ++ +L +L + +H
Sbjct: 114 VSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHA 173
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ + LE++ + N ++ Y CG S +++FD ++ WNSM++G
Sbjct: 174 KVLKLGLEHEITICNAMISSYANCGLVSDAKRVFD-----GLGGSKDLISWNSMIAGLSK 228
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK +H +K+G E+
Sbjct: 229 HEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSV 288
Query: 204 LTSLIDMYLK--CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+LI MY++ G + D L+LF + +D+VSW I+ G
Sbjct: 289 SNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTG-------------------- 328
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
F Q N +E+A+ ++ SS + +D Y
Sbjct: 329 --------FSQ------------------------NGLSEDAVKFFRYLRSSNIEVDDYA 356
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F++ L++C +L + Q H L S +E + V S+LI +Y++ G +++A + F +
Sbjct: 357 FSAVLRSCSDLATL--QLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQ 414
Query: 382 LPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ K + +AW+ +I+G +HG ++ LF M N N ++ +++L CS
Sbjct: 415 ISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACS------- 467
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
H ++ G E L S+ +Y K P + + + G+
Sbjct: 468 ----HTGLIQEGLE----LLNSMEPVY-------------KIQPRME--HYAAAVDLLGR 504
Query: 501 NGRAKEAIAYFQEMIQS-RLKPNEI---TFLGVLSACRHAGLVEEAWTIFTSMKPE 552
G + +E+I+S L P+ + TFLGV AC + + ++PE
Sbjct: 505 AGLVNKV----KELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE 556
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ LF +P++D V+W+ +I G T G ++ LF DM V+ + S +LK +
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
G+QVH VK G+E +SL+DMY KC ++D F + E + VSW +I
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 496 VGCGQNGRAKEAIAYFQEM-IQSRLKPNEITF---LGVLSACRHAGLVEEAWTIFTSMKP 551
G Q K A M +++ + ++ TF L +L L+++ +
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKL-- 178
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
GLE + M+ G DA+++ + D W SM+ H +
Sbjct: 179 --GLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKE 233
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 270/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G++ + TSLI MY++ G ++D +F+ RDVVS+T +I G
Sbjct: 122 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG--- 178
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN+MISGY N+EA+
Sbjct: 179 ------------YASKGYIASAQKMFDEI------PIKDVVSWNAMISGYAETGNNKEAL 220
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T S + AC + QVH I G+ + + + LID
Sbjct: 221 ELFKEMMKTNVRPDESTMVSVVSACAQSASI--ELGRQVHSWIDDHGFGSNLKIVNALID 278
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY + G V++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 279 LYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 338
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 339 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ R + SW +I G +GRA A F M ++ ++P++ITF+G+LSAC H+G+++
Sbjct: 399 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 458
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SMK +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 459 RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 518
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
+ N +L A+ L+ P++P YV+LSN+YAT G W+ ++K+R G KK G
Sbjct: 519 MYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 578
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 579 SSIEIDS 585
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 186/393 (47%), Gaps = 36/393 (9%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ + YTF LK+C F R Q
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF--REGQQ 124
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GY+LD V ++LI + YA G
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA ++F +P KDVV+W+ +I G + G N A LF++M+ +N ++ + SV+
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ AS+ G+QVH++ GF + +LID+Y+KCGE++ LF+ + +DV+SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L +L AC H G +E W K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
G+ H ++D+ + G + A+Q+ + + W +M+ H
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAA 423
Query: 611 SIIAEQLLATSPE-DPSKYVMLSNVYATLGMWD 642
I ++ E D +V L + + GM D
Sbjct: 424 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 456
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 196/437 (44%), Gaps = 78/437 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ ++G+ +H ++K G D++ +L+SMY L DA K+FD+ + +++
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK- 228
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ +V+ AC+ S ++LGR +H I + ++N L+D+Y+KCG +
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ S Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 289 ACGLFEGLS------YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 342
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G I+ G + ++ +R + G S S L+DMY+ C + A+
Sbjct: 343 LPACAHLGAIEIGRWIHVYINKR--------LKGVANASSHRTS-LIDMYAKCGDIEAAQ 393
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD + + S+ WN+MI G+ ++ + A + S + + + D TF L
Sbjct: 394 QVFDSILNRSLSS------WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLS 447
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + + DY + L IDL G K A E+ +
Sbjct: 448 AC-------SHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 500
Query: 382 LP-KKDVVAWSGLIMGC 397
+ + D V W L+ C
Sbjct: 501 MEMEPDGVIWCSLLKAC 517
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/586 (21%), Positives = 228/586 (38%), Gaps = 141/586 (24%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + L+ + F L A +F+ + N++ W
Sbjct: 13 KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWN 72
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P A+ LY M+ G + PN + + +LK+C+ S G+ IH + +
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 131
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------- 172
+ D + +L+ MYV+ G L RK+FDQ S+ +A+ Y
Sbjct: 132 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 191
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+M+SG
Sbjct: 192 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 251
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH++ GF + +LID+Y+KCGE++ LF + +DV+SW +I G
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG- 310
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ +E
Sbjct: 311 --------------YTHMNLY-------------------------------------KE 319
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + SG + T S L AC +L + V+ G ++L
Sbjct: 320 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 379
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA+ G++++A ++F + + + +W+ +I G HG + A+ +F M + + +
Sbjct: 380 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDD 475
+L CS L G+ H F R KED +T +ID+ G +
Sbjct: 440 ITFVGLLSACSHSGMLDLGR--HIF---RSM-KEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+ M E D V W ++ C + +Y Q +I+ K
Sbjct: 494 AEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPK 539
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y + A LF
Sbjct: 234 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 293
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 294 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAI 352
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
++GR IH I + + + + +L+DMY KCG + +++FD N + S+
Sbjct: 353 EIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS------ 406
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ AF + K E +D+T L+ G +D G +F M
Sbjct: 407 WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMK 466
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
E ++ GC ++D+ + + EA ++ + W A
Sbjct: 467 EDYKITPKLEHYGC----------MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 516
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
Y NV L S + + +N + LLS+I+++
Sbjct: 517 CKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 21 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG--- 77
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + R G+Q+H +K G++ +
Sbjct: 78 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 137
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV-------------------- 496
TSLI MY++ G ++D +F RDVVS+T +I
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 197
Query: 497 -----------GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
G + G KEA+ F+EM+++ ++P+E T + V+SAC + +E +
Sbjct: 198 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 257
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L + +K D W +++ TH
Sbjct: 258 HSWID-DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG-YTHM 314
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 315 NLYKEALLLFQEMLRSGESPNDVTMLS 341
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 276/512 (53%), Gaps = 26/512 (5%)
Query: 159 KLFDQYSNWAASAYGN---VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+L + AS Y N V L GK+VH GF V L+ MY KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ D +F+ MP RD+ SW + +V+ Y+ +L EARKLFD+ +
Sbjct: 135 SLVDARKVFDEMPNRDLCSW---------------NVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+Y W +M++GYV +Q EEA+ L S + + FT ++
Sbjct: 180 --KDSYS----WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN-IFTVSIAVAAAAAVK 232
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
R ++HG IV +G + D ++ S+L+D+Y + G + A +F ++ +KDVV+W+ +I
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
K + LF +++ S + N++ + VL C+ L + GKQVH + + GF+
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+SL+DMY KCG I+ + P+ D+VSWT +I GC QNG+ EA+ YF ++
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S KP+ +TF+ VLSAC HAGLVE+ F S+ ++ L +HY C+VDLL ++G F
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+ + +I+EMP KP K +WAS+L C T+ N L A++L PE+P YV ++N+Y
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A G W+ K+RK +++G K+ G SW E+
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 209/484 (43%), Gaps = 51/484 (10%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P Y +++ CS + L+ G+ +HE I V+ N LL MY KCGSL RK
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
+FD+ N ++ WN M++G +V R EK+ + T+++ Y+K
Sbjct: 142 VFDEMPN------RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 215 GEIDDGLALFNFM-------PERDVVSWTG------------------IIVGCFECSCFT 249
+ ++ L L++ M P VS I+ +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
S+L+DMY C + EAR +FD+ +V W SMI Y + + E +L S
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKI------VEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S + YTF L AC +L QVHG + G++ S+L+D+Y +
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLT--TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
GN++SA + PK D+V+W+ LI GC ++G A F ++ S + +VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 430 KVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
C+ + +G + ++ K T L+D+ + G + ++ MP +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 489 -VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIF 546
W ++ GC G A QE+ +++P N +T++ + + AG EE +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELF--KIEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 547 TSMK 550
M+
Sbjct: 546 KRMQ 549
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 175/478 (36%), Gaps = 149/478 (31%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK------------- 59
C Q R++++GK +H I G I N LL MYA SL DA K
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 60 ------------------LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
LFDEM K+ SWT MVT Y +P A+ LY+ M +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
PN F S + A + + G+ IH I R L+ D VL ++L+DMY KCG + R
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 160 LFDQ-----YSNWAA--SAYGNVALWN------SMLSG---------------------- 184
+FD+ +W + Y + W S L G
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQVH + + GF+ +SL+DMY KCG I+ + + P+ D+VSWT +I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
C + N Q +
Sbjct: 395 CAQ----------------------------------------------------NGQPD 402
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ + SG D TF + L AC H +V G E Y +
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSAC-------------THAGLVEKGLEFFYSITEK 449
Query: 362 ------------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
L+DL AR G + + +P K W+ ++ GC+ +G LA
Sbjct: 450 HRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 28/248 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + GK +H + + G F ++L+ MY ++ A + D + ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+++ N +P+ A++ ++ +L+ G+ +P+ + VL AC+ +G ++ G
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGT-KPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 130 RIT-REKLEYDTVLMNTLLDMYVKCG------SLTRKLFDQYSN--WAA-----SAYGNV 175
IT + +L + + L+D+ + G S+ ++ + S WA+ S YGN+
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-----R 230
L ++ + VT ++ ++Y G+ ++ + M E R
Sbjct: 505 DLAEEAAQELFKIEP--------ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 231 DVVSWTGI 238
SWT I
Sbjct: 557 PGSSWTEI 564
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/758 (27%), Positives = 350/758 (46%), Gaps = 105/758 (13%)
Query: 6 IVEALRHCGQRRSI-KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I + CG+ S+ ++G +H + K GL D++ +L +Y + ++ + K+F+EM
Sbjct: 162 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 221
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+N+VSWT+++ Y+ P I +Y M G VE N S V+ +C L D LG
Sbjct: 222 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG-VECNENSMSLVISSCGLLKDESLG 280
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG-- 173
R I ++ + LE + N+L+ M+ G++ +F+Q S N +AY
Sbjct: 281 RQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQN 340
Query: 174 --------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL 204
N +++LS G+ +H VK GF+
Sbjct: 341 GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVC 400
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSW----------------------------- 235
+L+ MY G ++ +F MP +D++SW
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 236 ------TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
T + CF F +ALV MY + +R++
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRV 520
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Q +V WN++I GY NE ++A+ + G+ + T S L AC
Sbjct: 521 LLQMPRR------DVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSAC 574
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + R +H IV++G+E D V ++LI +YA+ G++ S+ +LF+ L + ++
Sbjct: 575 LVPGDLLER-GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT 633
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ HG L M + ++QF S L + LA L G+Q+H V
Sbjct: 634 WNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 693
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K GFE + + DMY KCGEI + + + R + SW +I G++G +E
Sbjct: 694 KLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCE 753
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F EM++ +KP +TF+ +L+AC H GLV++ + + ++GLEP +EH C++DLL
Sbjct: 754 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLL 813
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G++G +AE I++MP KP+ +W S+L +C+ H + AE L PED S +V
Sbjct: 814 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFV 873
Query: 630 MLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+ SN++AT G W+ + VRK G K +KK SW+++
Sbjct: 874 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 911
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 167/710 (23%), Positives = 293/710 (41%), Gaps = 139/710 (19%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G++LH +K + + N L++MY F + A LFD+M +N VSW TM++
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLIHERITREKLEYDT 140
+ + M + G ++P+ F+ ++++ AC SG + G +H + + L D
Sbjct: 137 VGLYLEGMEFFQKMCDLG-IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195
Query: 141 VLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-------------- 184
+ +L +Y G S +RK+F++ + NV W S++ G
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPD------RNVVSWTSLMVGYSDKGEPEEVIDIY 249
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G+Q+ +K G E + SLI M+
Sbjct: 250 KSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNM 309
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCF--------------------ECSCFTLSALV 254
G +D +FN + ERD +SW I+ E + T+S L+
Sbjct: 310 GNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLL 369
Query: 255 DMYSNCN-------------------VLCEARKLFDQYSSWAASAYGNVAL--------- 286
+ + + V+C L Y+ S ++
Sbjct: 370 SVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLI 429
Query: 287 -WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WNS+++ +V + ++ +A+ +L + +G ++ TFTSAL AC + F+ L HG
Sbjct: 430 SWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRIL--HG 487
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L+V SG + I+G+ L+ +Y ++G + ++ + ++P++DVVAW+ LI G ++
Sbjct: 488 LVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDK 547
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSLI 464
A F+ + N + SVL C L RGK +HA+ V GFE ++ SLI
Sbjct: 548 ALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 607
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY KCG++ LF + R +++W I+ +G +E + +M L ++
Sbjct: 608 TMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQF 667
Query: 525 TFLGVLSACRHAGLVEEAWT---------------IFTSMKPEYG-----------LEP- 557
+F LSA ++EE IF + Y L P
Sbjct: 668 SFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPS 727
Query: 558 ---HLEHYYCMVDLLGQAGCFDDAEQL---IAEMPFKPDKTIWASMLKAC 601
L + ++ LG+ G F++ + + EM KP + S+L AC
Sbjct: 728 VNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTAC 777
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 343/671 (51%), Gaps = 44/671 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R+C +++ K LH R++ Q++ L+++Y ++ A FD + +++
Sbjct: 61 FRYC---TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDV 117
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W M++ Y + IR ++ + ++P+ + +VLKAC D G IH
Sbjct: 118 YAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHC 174
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ +D + +L+ +Y + G++ R LFD+ ++ WN+M+SG
Sbjct: 175 LALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPT------RDMGSWNAMISGYCQ 228
Query: 185 -GKQVHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G A + G D VT+ SL+ + G+ + G+ + ++ + +
Sbjct: 229 SGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL---------- 278
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
E F + L+D+Y+ L + +K+FD+ ++ WNS+I Y LNEQ
Sbjct: 279 -ESELFVSNKLIDLYAEFGSLKDCQKVFDRM------YVRDLISWNSIIKAYELNEQPLR 331
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN 361
AI L + S + D T S L + ++ L R V G + G+ L D +G+
Sbjct: 332 AILLFQEMRLSRIQPDCLTLIS-LASILSQLG-EIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV- 420
++ +YA+LG V SA +F+ LP KDV++W+ +I G ++G S A ++ M ++
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEIS 449
Query: 421 -NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
NQ SVL CS +LR+G ++H +K G + TSL DMY KCG +DD L+L
Sbjct: 450 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSL 509
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F +P + V W +I G +G ++A+ F+EM+ +KP+ ITF+ +LSAC H+GLV
Sbjct: 510 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 569
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+E F M+ +YG+ P L+HY CMVDL G+AG + A I MP +PD +IW ++L
Sbjct: 570 DEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLS 629
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEK 657
AC H N L I +E L PE +V+LSN+YA+ G W+ + ++R +GK L K
Sbjct: 630 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL-RK 688
Query: 658 KAGMSWIEVSS 668
G S +EV +
Sbjct: 689 TPGWSSMEVDN 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 175/458 (38%), Gaps = 124/458 (27%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD +V L C + +G ++H IK+GL ++F N L+ +YA+F SL D K+
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKV 304
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++++SW +++ AY N++P AI L+ M ++P+ ++ S G+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEM-RLSRIQPDCLTLISLASILSQLGE 363
Query: 121 LDLGRLIHERITREK--LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
+ R + R+ LE D + N ++ MY K G + R +F NW + +V
Sbjct: 364 IRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVF----NWLPNK--DVI 416
Query: 177 LWNSMLSG----------------------------------------------GKQVHA 190
WN+++SG G ++H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHG 476
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+K G + TSL DMY KCG +DD L+LF +P + V W +I C F
Sbjct: 477 RLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIA----CHGF-- 530
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ E+A+ L +
Sbjct: 531 ----------------------------------------------HGHGEKAVMLFKEM 544
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------ID 364
G+ D TF + L AC S L G + DY + +L +D
Sbjct: 545 LDEGVKPDHITFVTLLSAC-------SHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVD 597
Query: 365 LYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
LY R G ++ AL +P + D W L+ C HG
Sbjct: 598 LYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHG 635
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/676 (29%), Positives = 334/676 (49%), Gaps = 90/676 (13%)
Query: 29 IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA 88
++K GL+ ++ NNL+++YA DAH LF+EM K SW T+++ Y + A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
++++ + SV ++ ++ + G + I + ++K+ TL +
Sbjct: 61 HQVFDLIPVRDSVS-----WTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQF---TLTN 112
Query: 149 MYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+ C +A G+ + GK+VH+F VK G SL+
Sbjct: 113 VLASC----------------AATGSRGI-------GKKVHSFVVKLGLHACVPVANSLL 149
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+MY K G++ +F+ M R+ SW +A++ ++ NC + A
Sbjct: 150 NMYAKTGDLKMAKVVFDRMKLRNTSSW---------------NAMISLHMNCGRVDLALA 194
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALK 327
F+ S ++ WNSMI+G + + EA+ S I + + D ++ SAL
Sbjct: 195 QFELLSE------RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALS 248
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR------------------- 368
AC NL + F Q+HG IV + ++ VG+ LI +YA+
Sbjct: 249 ACANLEKLS--FGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 369 --------------LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
LG++ A ++F+ L DVVAW+ +I+G ++GLN+ A +F+ M+
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ N F ++++L S + SL GKQ+HA ++ G +L MY K G I+
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSIN 426
Query: 475 DGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F + + RD VSWT +I+ Q+G +EAI F++M+ +KP+ IT++GVLSAC
Sbjct: 427 GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H GLVE+ + F MK + ++P L HY CMVDL G+AG +A + + MP +PD
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W S+L +C+ + N L + AE+LL P + Y L+NVY++ G WD +K+RK K
Sbjct: 547 WGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKA 606
Query: 654 LGEKK-AGMSWIEVSS 668
G KK G+SW+++ +
Sbjct: 607 RGVKKEQGLSWVQIQN 622
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 156/696 (22%), Positives = 269/696 (38%), Gaps = 175/696 (25%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C S GK +H ++K GL + N+LL+MYA L A +FD M
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169
Query: 66 RKN-------------------------------IVSWTTMVTAYTSNKRPNWAIRLYNH 94
+N IVSW +M+ + N A++ ++
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSS 229
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+L+ S++P+ F ++ L AC+ L G+ IH I R + + N L+ MY K G
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289
Query: 155 --SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMY 211
+ R++ +Q G DV T+L++ Y
Sbjct: 290 GVEIARRIIEQ-------------------------------SGISDLDVIAFTALLNGY 318
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+K G+I +FN + + DVV+WT +IVG
Sbjct: 319 VKLGDITPARQIFNSLKDPDVVAWTAMIVG------------------------------ 348
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
YV N N +AI + + S G +S+T + L A +
Sbjct: 349 ----------------------YVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSS 386
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAW 390
+ + N Q+H + SG L VG+ L +YA+ G++ A ++F+ L + +D V+W
Sbjct: 387 VTSLN--HGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSW 444
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +IM +HGL A LF M+ + VL C+ + +G+ F +
Sbjct: 445 TSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSY--FDLM 502
Query: 451 RGFEKEDITLTS---LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKE 506
+ K D TL+ ++D++ + G + + + MP E DV++W ++ C
Sbjct: 503 KNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDL 562
Query: 507 AIAYFQEMIQSRLKPNE----ITFLGVLSACRHAGLVEEAWTIFTSMKP----------- 551
A + ++ ++PN V S+C G ++A I MK
Sbjct: 563 AKVAAERLL--LIEPNNSGAYSALANVYSSC---GKWDDAAKIRKLMKARGVKKEQGLSW 617
Query: 552 ------------EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E GL P + Y M+D + + I +M F PD S+L
Sbjct: 618 VQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKE---------IKKMGFAPDTE---SVLH 665
Query: 600 ACETHNNTKLVSIIAEQL-----LATSPEDPSKYVM 630
E +++ +E+L + ++PE+ + +M
Sbjct: 666 DLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIM 701
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/680 (29%), Positives = 341/680 (50%), Gaps = 39/680 (5%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT---GNNLLSMYADFTSLNDA 57
+D R L+ C + RS++ GK H + L +D G L+ MY L +A
Sbjct: 89 VDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148
Query: 58 HKLFDEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
++FDEM + ++ WT +++ Y + L+ M G V P+ + S VLK +
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCG-VRPDAYTISCVLKCIA 207
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVA 176
G ++ G ++H + + + N L+ Y K + + D + + +V
Sbjct: 208 GLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAK----SNRTKDAILVFDGMPHRDVI 263
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE------- 229
WNSM+SG C G + + L + M+L+ GE D L + +P
Sbjct: 264 SWNSMISG-------CTSNGLYDKAIEL--FVRMWLE-GEELDSATLLSVLPACAELHLL 313
Query: 230 --RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
VV + G F + L+DMYSNC+ K+F NV W
Sbjct: 314 FLGRVVHGYSVKTG-FISQTSLANVLLDMYSNCSDWRSTNKIFRNM------VQKNVVSW 366
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MI+ Y ++ L + G D + TSAL A N + VHG
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAG--NELLKHGKSVHGYA 424
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G E V + L+++Y + GN++ A +F + KD+++W+ LI G +++ L + A+
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF +M+ + N ++ +L + L+SL RG+++HA+ ++RG+ ++D +LIDMY
Sbjct: 485 SLFTEMLLQLRP-NAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMY 543
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+KCG + LF + ++++SWT ++ G G +GR ++AIA F++M S + P+ +F
Sbjct: 544 VKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFS 603
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+L AC H+GL +E W F +M+ E+ +EP L+HY CMVDLL G +A + I MP
Sbjct: 604 AILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPI 663
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+PD +IW S+L+ C H N KL +AE++ PE+ YV+L+N+YA W+++ K+
Sbjct: 664 EPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKL 723
Query: 648 R-KAGKKLGEKKAGMSWIEV 666
+ K G + + G SWIE
Sbjct: 724 KNKIGGRGLRENTGCSWIEA 743
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 309/635 (48%), Gaps = 85/635 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y A LFDEM +++VSW M+ Y N+ A L+ M E
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC 153
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
++ +L + +G +D R + +R+ E + V N LL YV+ L
Sbjct: 154 S-----WNTILSGYAQNGCVDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEACV 204
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
LF NWA + WN +L G + R F ++ V+ ++I Y +
Sbjct: 205 LFGSRENWA------LVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQN 258
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
GEID+ LF+ P DV +WT ++ G Y ++ EAR+LFD+
Sbjct: 259 GEIDEARQLFDESPVHDVFTWTAMVSG---------------YIQNRMVEEARELFDRMP 303
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N WN+M++GYV E+ E A L + C N+
Sbjct: 304 E------RNEVSWNAMLAGYVQGERVEMAKELFD-----------------VMPCRNVST 340
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+N+ +I YA+ G + A LF ++PK+D V+W+ +I
Sbjct: 341 WNT------------------------MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 376
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++ G + A LF M +N+ SS L C+ + +L GKQ+H VK G+E
Sbjct: 377 AGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 436
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+ MY KCG I++ LFK M +D+VSW +I G ++G +EA+ +F+ M
Sbjct: 437 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESM 496
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ LKP++ T + VLSAC H GLV++ F +M +YG+ P+ +HY CMVDLLG+AG
Sbjct: 497 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGL 556
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
++A L+ MPF+PD IW ++L A H NT+L A+++ A PE+ YV+LSN+
Sbjct: 557 LEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 616
Query: 635 YATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
YA+ G W + K+R + G KK G SWIE+ +
Sbjct: 617 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 651
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 54/496 (10%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ R++ + + L R+ + +D+ + N +LS YA ++DA ++FD M KN VSW
Sbjct: 133 RNRNLGKARELFERMPE----RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNA 188
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+++AY N + A L+ + V N C L G + +++ R +
Sbjct: 189 LLSAYVQNSKLEEACVLFGSRENWALVSWN----------CLLGGFVKKKKIVEARQFFD 238
Query: 135 KLEY-DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
++ D V NT++ Y + G + R+LFD+ S +V W +M+SG Q
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDE------SPVHDVFTWTAMVSGYIQNRMV 292
Query: 192 CVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
R E+ +V+ +++ Y++ ++ LF+ MP R+V +W +I G
Sbjct: 293 EEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITG----- 347
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
Y+ C + EA+ LFD+ + W +MI+GY + + EA+ L
Sbjct: 348 ----------YAQCGKISEAKNLFDKMPK------RDPVSWAAMIAGYSQSGHSYEALRL 391
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ G ++ +F+SAL C +++ Q+HG +V GYE VG+ L+ +Y
Sbjct: 392 FVLMEREGGRLNRSSFSSALSTCADVVALE--LGKQLHGRLVKGGYETGCFVGNALLLMY 449
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G+++ A +LF + KD+V+W+ +I G ++HG A F M + +
Sbjct: 450 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV 509
Query: 427 SVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
+VL CS + +G+Q H G ++D+ + G +++ L K MP
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569
Query: 485 ERDVVSWTGIIVGCGQ 500
E D W G ++G +
Sbjct: 570 EPDAAIW-GTLLGASR 584
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK LH R++K G F GN LL MY S+ +A+ LF EMA K+
Sbjct: 410 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 469
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
IVSW TM+ Y+ + A+R + M G ++P+ AVL ACS +G +D GR
Sbjct: 470 IVSWNTMIAGYSRHGFGEEALRFFESMKREG-LKPDDATMVAVLSACSHTGLVDKGRQYF 528
Query: 129 ERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+T++ + ++ ++D+ + G L + + N + A+W ++L G +
Sbjct: 529 HTMTQDYGVRPNSQHYACMVDLLGRAG-LLEEAHNLMKNMPFEP--DAAIWGTLL-GASR 584
Query: 188 VHA 190
VH
Sbjct: 585 VHG 587
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ T N +++ YA +++A LFD+M +++ VSW M+ Y+ + A+RL+ M
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLM 395
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G N +S+ L C+ L+LG+ +H R+ + E + N LL MY KCGS
Sbjct: 396 EREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF--CVKR-GFEKEDVTL 204
+ LF + A ++ WN+M++G G++ F +KR G + +D T+
Sbjct: 455 IEEANDLFKEM------AGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATM 508
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+++ G +D G F+ M + G+ +C +VD+ +L
Sbjct: 509 VAVLSACSHTGLVDKGRQYFHTMTQD-----YGVRPNSQHYAC-----MVDLLGRAGLLE 558
Query: 265 EARKLFDQY------SSW-----AASAYGNVALWNSMISG-YVLNEQNEEAITLLSHIHS 312
EA L + W A+ +GN L + + + +N LLS++++
Sbjct: 559 EAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 618
Query: 313 S 313
S
Sbjct: 619 S 619
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/677 (32%), Positives = 328/677 (48%), Gaps = 45/677 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L H +SI + K+LHC +I G +S I + L YA + A KLF+EM + +
Sbjct: 22 LNHFAATQSISKTKALHCHVITGGRVSGHILS--TLSVTYALCGHITYARKLFEEMPQSS 79
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++S+ ++ Y + AI ++ M+ G P+G+ Y V KA + LG ++
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H RI R D + N LL MY+ G + R +FD N +V WN+M+SG
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR------DVISWNTMISGY 193
Query: 185 ---GKQVHAFCVKRGFEKEDVTL--TSLIDMYLKCGEIDD---GLALFNFMPERDVVSWT 236
G A + E V L +++ M CG + D G + + E+ +
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ +ALV+MY C + EAR +FD+ +V W MI+GY
Sbjct: 254 EV-----------KNALVNMYLKCGRMDEARFVFDRMERR------DVITWTCMINGYTE 296
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ E A+ L + G+ ++ T S + C + L N L HG V D
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL--HGWAVRQQVYSDI 354
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
I+ ++LI +YA+ V +F K WS +I GC ++ L S A LF+ M
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + N ++S+L + LA LR+ +H + K GF T L+ +Y KCG ++
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 477 LALFKFMPER----DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+F + E+ DVV W +I G G +G A+ F EM++S + PNEITF L+A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H+GLVEE T+F M Y HY C+VDLLG+AG D+A LI +PF+P T
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L AC TH N +L + A +L PE+ YV+L+N+YA LG W + KVR +
Sbjct: 595 VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 653 KLG-EKKAGMSWIEVSS 668
+G KK G S IE+ S
Sbjct: 655 NVGLRKKPGHSTIEIRS 671
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 43/417 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D IV L CG + ++ G+++H + + L I N L++MY +++A +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M R+++++WT M+ YT + A+ L ++++ V PN ++++ C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCR-LMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
++ G+ +H R+++ D ++ +L+ MY KC + F +S AS Y + W++
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL-CFRVFS--GASKY-HTGPWSA 390
Query: 181 MLSGGKQ----VHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+++G Q A + + +EDV TL SL+ Y ++ + + ++ +
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK-- 448
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
TG F S + LV +YS C L A K+F+ S +V LW ++I
Sbjct: 449 ----TG-----FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK--DVVLWGALI 497
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLNFNSRFALQVH 344
SGY ++ A+ + + SG+ + TFTSAL AC + L F RF L+ +
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF--RFMLEHY 555
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ S + + ++DL R G + A L +P + W L+ C H
Sbjct: 556 KTLARSNHY------TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 276/542 (50%), Gaps = 65/542 (11%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI--- 238
L G++VHA +K G + +L+ MY KCG + D +F+ + +R++VSWT +
Sbjct: 63 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEA 122
Query: 239 ------------------IVGC----------------------------------FECS 246
+ GC E
Sbjct: 123 FVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE 182
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
++LV MY+ C + +AR +FD+ NV W +I+GY Q + A+ L
Sbjct: 183 PRVGTSLVGMYAKCGDISKARVIFDRLPE------KNVVTWTLLIAGYAQQGQVDVALEL 236
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L + + + + TF S L+ C +VH I+ SGY + V ++LI +Y
Sbjct: 237 LETMQQAEVAPNKITFASILQGCTTPAALE--HGKKVHRYIIQSGYGRELWVVNSLITMY 294
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G ++ A +LF LP +DVV W+ ++ G + G + A LFR M ++ +
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
SVL CS A L+ GK++H V G+ + ++L+ MY KCG +DD +F M ER
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER 414
Query: 487 DVVSWTGIIVGC-GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+VV+WT II GC Q+GR +EA+ YF +M + +KP+++TF VLSAC H GLVEE
Sbjct: 415 NVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKH 474
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM +YG++P +EHY C VDLLG+AG ++AE +I MPF P ++W ++L AC H+
Sbjct: 475 FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHS 534
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+ + AE +L P+D YV LS++YA G ++ KVR+ +K K+ G SWI
Sbjct: 535 DVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 594
Query: 665 EV 666
EV
Sbjct: 595 EV 596
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 238/534 (44%), Gaps = 102/534 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + RS++QG+ +H I+K G+ + + N LLSMYA SL DA ++FD + +NI
Sbjct: 54 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNI 113
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M+ A+ + + A + Y M + +P+ + ++L A + L LG+ +H
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETM-KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY------------SNWAASAYGNV 175
I LE + + +L+ MY KCG ++ R +FD+ + +A +V
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232
Query: 176 AL-----------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLID 209
AL + S+L G GK+VH + ++ G+ +E + SLI
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG +++ LF+ +P RDVV+WT ++ G
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG---------------------------- 324
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Y + + EAI L + G+ D TFTS L +C
Sbjct: 325 -----------YAQLGFHD-------------EAINLFRRMQQQGIKPDKMTFTSVLTSC 360
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ ++H +V +GY LD + S L+ +YA+ G++ A +F+++ +++VVA
Sbjct: 361 SSPAFLQE--GKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVA 418
Query: 390 WSGLIMG-CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAF 447
W+ +I G C +HG A F M ++ +SVL C+ + + G K +
Sbjct: 419 WTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 478
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDG---LALFKFMPERDVVSWTGIIVGC 498
+ G + + +D+ + G +++ + F+P V W ++ C
Sbjct: 479 YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSV--WGALLSAC 530
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 28/245 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++GK +H +++ G + D++ + L+SMYA S++DA +F++M+ +N+
Sbjct: 357 LTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416
Query: 70 VSWTTMVTA-YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+WT ++T + R A+ ++ M + G ++P+ +++VL AC+ G ++ GR
Sbjct: 417 VAWTAIITGCCAQHGRCREALEYFDQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGR--- 472
Query: 129 ERITREKLEYDTVLM----NTLLDMYVKCGSLTRKLFDQYSNWAASA--YGNVALWNSML 182
+ L+Y M + +D+ + G L ++ N S ++W ++L
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL-----EEAENVILSMPFIPGPSVWGALL 527
Query: 183 SGGKQVHAFCVKRGFE----------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
S + VH+ V+RG +D +L +Y G +D + M +RDV
Sbjct: 528 SACR-VHSD-VERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 233 VSWTG 237
V G
Sbjct: 586 VKEPG 590
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
K G A + MI V + +L+ C+ L SL +G++VHA +K G +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+L+ MY KCG + D +F + +R++VSWT +I + EA ++ M +
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
KP+++TF+ +L+A + L++ + + E GLE +V + + G A
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV-EAGLELEPRVGTSLVGMYAKCGDISKA 202
Query: 579 EQLIAEMPFK 588
+ +P K
Sbjct: 203 RVIFDRLPEK 212
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 342/677 (50%), Gaps = 42/677 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD--E 63
+ L+ CG + G +H +K GL + N L+ MYA L+ A ++F+ +
Sbjct: 167 LASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQ 226
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+++ SW ++V+ N R A+ L+ M G N + AVL+ C+ G L L
Sbjct: 227 QDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAG-FPMNSYTSVAVLQVCAELGLLSL 285
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM 181
GR +H + + E + + N LL MY K G + ++F Q A + WNSM
Sbjct: 286 GRELHAALLKCGSELN-IQCNALLVMYAKYGRVDSALRVFGQI------AEKDYISWNSM 338
Query: 182 LSGGKQVHAFC---------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
LS Q + ++ GF+ + + SL +++G + ++ +
Sbjct: 339 LSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRL 398
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
T + VG + L+DMY C + + K+F+ + + W ++++
Sbjct: 399 --HTDLQVG---------NTLMDMYIKCGSIECSAKVFE------SMGIRDHISWTTILA 441
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
+ + ++ EA+ ++ + G+ +DS S L+ C L + + QVH + +G
Sbjct: 442 CFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS--LLKQVHCYAIRNGL 499
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
LD I+ + LID+Y G +L LF R+ KKD+V+W+ +I CT +G + A LF +
Sbjct: 500 -LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTE 558
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M +N + + S+L + L+SL +GKQVH F ++R F E ++SL+DMY CG
Sbjct: 559 MQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGS 618
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++ + +F+ +DVV WT +I G +G K+AI F+ M+Q+ L P+ ++FL +L A
Sbjct: 619 MNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYA 678
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H+ LVEE M +Y L+P EHY C+VD+LG++G ++A + I MP P
Sbjct: 679 CSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSA 738
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L AC H N L + A +LL P++P Y+++SNV+A +G W++ + R
Sbjct: 739 VWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMA 798
Query: 653 KLG-EKKAGMSWIEVSS 668
+ G K SWIE+ +
Sbjct: 799 ERGLRKNPACSWIEIGN 815
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 167/645 (25%), Positives = 293/645 (45%), Gaps = 43/645 (6%)
Query: 21 QGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+G+ +H + G D F L+ MY ++DA +LF+ M + + SW +V
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSV--EPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
AY S+ A+R+Y M + P+G ++VLKAC GD G +H +
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
L+ T++ N L+ MY KCG L L + W +VA WNS++SG G+ + A
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSAL--RVFEWLQQDARDVASWNSVVSGCVQNGRTLEAL 252
Query: 192 CVKRGFEKEDVTLTSLIDMYL--KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
+ RG + + S + + C E L L + E ++ C
Sbjct: 253 ALFRGMQSAGFPMNSYTSVAVLQVCAE----LGLLSLGRELHAA-----LLKCGSELNIQ 303
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+AL+ MY+ + A ++F Q A + WNSM+S YV N EAI
Sbjct: 304 CNALLVMYAKYGRVDSALRVFGQI------AEKDYISWNSMLSCYVQNSFYAEAIDFFGE 357
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ G D S A +L N+ + H + D VG+ L+D+Y +
Sbjct: 358 MLQHGFQPDHACVVSLSSALGHLSRLNN--GREFHAYAIKQRLHTDLQVGNTLMDMYIKC 415
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G+++ + ++F + +D ++W+ ++ + +S A + ++ V+ +I S+L
Sbjct: 416 GSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSIL 475
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDV 488
+ C L S+ KQVH + ++ G D+ L + LID+Y +CGE D L LF+ + ++D+
Sbjct: 476 ETCCGLKSISLLKQVHCYAIRNGL--LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDI 533
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
VSWT +I C NGR A+ F EM ++ ++P+ + + +L A + + +
Sbjct: 534 VSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGF 593
Query: 549 M-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ + + +E + +VD+ G + A ++ K D +W +M+ A H +
Sbjct: 594 LIRRNFPIEGPV--VSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGHG 650
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
K + +++L T P L+ +YA S SK+ + GK
Sbjct: 651 KQAIDLFKRMLQTGLT-PDHVSFLALLYAC-----SHSKLVEEGK 689
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 341/657 (51%), Gaps = 39/657 (5%)
Query: 22 GKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ LHC +K G + ++ G +L+ MY S+ + ++F+ M +KN+V+WT+++T
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ + + L+ M G + PN F +++VL A + G LDLG+ +H + +
Sbjct: 178 HAQMHSEVMALFFRMRAEG-IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSV 236
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK-------QVHAF 191
+ N+L++MY KCG + + +F NW + ++ WN++++G + + F
Sbjct: 237 FVCNSLMNMYAKCGLVEDAKSVF----NWMETR--DMVSWNTLMAGLQLNECELEALQLF 290
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
R + +T ++ + C + LAL + + ++ F + ++
Sbjct: 291 HESRATMGK-MTQSTYATVIKLCANLKQ-LALARQL-------HSCVLKHGFHLTGNVMT 341
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
AL D YS C L +A +F + NV W ++ISG + N A+ L S +
Sbjct: 342 ALADAYSKCGELADALNIFSM-----TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ + +T+++ LKA +++L Q+H ++ + Y+ VG+ L+ Y++ G+
Sbjct: 397 EDRVMPNEFTYSAMLKASLSIL------PPQIHAQVIKTNYQHIPFVGTALLASYSKFGS 450
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ AL +F + +KDVVAWS ++ + G A LF M N+F ISSV+
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510
Query: 432 CSCL-ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+C A + +G+Q HA +K + ++L+ MY + G ID +F+ +RD+VS
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS 570
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G Q+G + +AI F++M S ++ + +TFL V+ C H GLV E F SM
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMV 630
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++ + P +EHY CMVDL +AG D+ LI +MPF +W ++L AC H N +L
Sbjct: 631 RDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELG 690
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
A++LL+ P D S YV+LSN+YA G W +VRK + +K+AG SWI++
Sbjct: 691 KFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQI 747
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 162/353 (45%), Gaps = 9/353 (2%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR D+ A+ N L++ G VL E + S G+ +DS T +
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVL-----EVLDQFSVARRGGVLVDSATLSCV 105
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPK 384
LKAC ++ + Q+H L V G++ + G++L+D+Y + G+V +E+F +PK
Sbjct: 106 LKACRSVPD--RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
K+VV W+ L+ GC ++S LF M N F +SVL + +L G++V
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
HA VK G SL++MY KCG ++D ++F +M RD+VSW ++ G N
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
EA+ F E + K + T+ V+ C + + A + + + ++G
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVL-KHGFHLTGNVMTA 342
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+ D + G DA + + + W +++ C + + L ++ ++
Sbjct: 343 LADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRM 395
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ QG+ H IKY I + L+SMY+ +++ A +F+ +++VSW +M++
Sbjct: 518 VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISG 577
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KLE 137
Y + AI + M E ++ +G + AV+ C+ +G + G+ + + R+ K+
Sbjct: 578 YAQHGYSMKAIETFRQM-EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKIN 636
Query: 138 YDTVLMNTLLDMYVKCGSLTRKL 160
++D+Y + G L +
Sbjct: 637 PTMEHYACMVDLYSRAGKLDETM 659
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 211/665 (31%), Positives = 350/665 (52%), Gaps = 41/665 (6%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
GK H +IK + +F NN L++Y+ + + +A KLFD M+ ++++S+ +++ Y
Sbjct: 27 HGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYG 86
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ AI L++ ++ + F Y+ VL AC D LG++IH L
Sbjct: 87 GMGFYHKAIGLFSEA-RMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQV 145
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFE 198
L N L+DMY KC + R LF+ ++ NV+ WNS+++G +V A+
Sbjct: 146 FLTNLLIDMYCKCERIDHARLLFE-----SSDELDNVS-WNSLITGYARVGAY------- 192
Query: 199 KEDVTLTSLIDMY---LKCGEIDDGLALFN-FMPERDVVSWTGIIVG-----CFECSCFT 249
+ L L+ M+ L+ G AL + ++ ++VS+ + G +
Sbjct: 193 --EEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVV 250
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE-----EAI 304
+AL+DMY+ L +A +LF S NV ++N+MI+G++ E + EA+
Sbjct: 251 GTALLDMYAKTGYLGDAIQLF------RTSPNQNVVMYNAMIAGFIQTEDIDKECAYEAL 304
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L S + G+ +TF+S +K C ++ F + Q+H I + D +GS LI+
Sbjct: 305 KLFSQMQRQGIKPSDFTFSSIIKICNHIEAF--EYGKQIHAHICKHNIQSDEFIGSTLIE 362
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY+ LG+ + L+ F+ PK D+V+W+ +I G ++G A LF +++ S + ++FI
Sbjct: 363 LYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
I+++L C+ +A+ R G+QVH + VK G I S I MY K G +D F+ +
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
DVVSW+ +I Q+G AK+AI F+ M + PN+ITFLGVL+AC H GLVEE
Sbjct: 483 NPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLR 542
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+ SMK +Y ++ +++H C+VDLL +AG DA+ I F +W ++L C +
Sbjct: 543 YYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIY 602
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
+ +AE+L+ P++ S YV+L N+Y G+ +K+R+ K G K+ G SW
Sbjct: 603 KDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSW 662
Query: 664 IEVSS 668
IEV +
Sbjct: 663 IEVGN 667
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 184/475 (38%), Gaps = 110/475 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CGQ + GK +H I GL Q +F N L+ MY ++ A LF+ +
Sbjct: 117 LSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDN 176
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLDLGRLI 127
VSW +++T Y ++L M G + N F + LK+C +L+ + G+ +
Sbjct: 177 VSWNSLITGYARVGAYEEMLKLLVKMHHTG-LRLNAFTLGSALKSCYLNLNNMVSYGKTL 235
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H ++ L+ D V+ LLDMY K G L D + S NV ++N+M++G
Sbjct: 236 HGYTVKQGLDLDIVVGTALLDMYAKTGYLG----DAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 185 ----------------------------------------------GKQVHAFCVKRGFE 198
GKQ+HA K +
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
++ ++LI++Y G +D L FN P+ D+VSWT +I G
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAG----------------- 394
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
Y N Q E A+ L + +SG D
Sbjct: 395 -----------------------------------YAQNGQFESALALFYELLASGKKPD 419
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+ T+ L AC ++ R QVHG V +G IV ++ I +YA+ GN+ SA
Sbjct: 420 EFIITTMLSACADVA--AERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKIT 477
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
F + DVV+WS +I +HG A LF M + NQ VL CS
Sbjct: 478 FEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS 532
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + + GK +H I K+ + D F G+ L+ +Y+ S D K F+ + +I
Sbjct: 326 IKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI 385
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWTTM+ Y N + A+ L+ +L G +P+ F+ + +L AC+ G +H
Sbjct: 386 VSWTTMIAGYAQNGQFESALALFYELLASGK-KPDEFIITTMLSACADVAAERSGEQVHG 444
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML-SGGK 186
+ + ++ N+ + MY K G+L + F++ N +V W+ M+ S +
Sbjct: 445 YAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKN------PDVVSWSVMICSNAQ 498
Query: 187 QVHA--------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
HA G +T ++ G +++GL + M ++D +
Sbjct: 499 HGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESM-KKDY----DM 553
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN-VALWNSMISG 293
+ C+C +VD+ L A +L D + S +G+ +W +++SG
Sbjct: 554 KINVKHCTC-----IVDL------LSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + + G+ +H +K G+ N+ +SMYA +L+ A F+E+
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VSW+ M+ + + AI L+ M YG + PN + VL ACS G ++ G
Sbjct: 483 NPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG-IHPNQITFLGVLTACSHGGLVEEGL 541
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN-VALWNSMLS 183
+E + ++ ++ + ++D+ + G +L D + S +G+ +W ++LS
Sbjct: 542 RYYESMKKDYDMKINVKHCTCIVDLLSRAG----RLLDAKNFILNSGFGDHPVMWRTLLS 597
Query: 184 G 184
G
Sbjct: 598 G 598
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 198/669 (29%), Positives = 341/669 (50%), Gaps = 41/669 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G SLH RI+ GLS D + ++L++ YA F + A K+FD M +N+
Sbjct: 76 LKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNV 135
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V WT+++ Y+ R A L++ M G ++P+ ++L S +L + +H
Sbjct: 136 VPWTSIIGCYSRTGRVPEAFSLFDEMRRQG-IQPSSVTMLSLLFGVS---ELAHVQCLHG 191
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
D L N++L MY KC ++ +RKLFD ++ WNS++S Q
Sbjct: 192 SAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQR------DLVSWNSLVSAYAQ 245
Query: 188 VHAFCVK---------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ C +GFE + T S++ + GE+ G L I
Sbjct: 246 IGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHG-----------QI 294
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ CF+ ++L+ MY + A ++F++ S +V LW +MISG V N
Sbjct: 295 LRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFER------SLDKDVVLWTAMISGLVQNG 348
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ + + G+ + T S + AC L ++N VHG + +D
Sbjct: 349 SADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYN--LGTSVHGYMFRHELPMDIAT 406
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++L+ ++A+ G++ + +F ++ K+++V+W+ +I G ++G A LF +M + +Q
Sbjct: 407 QNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQ 466
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ I S+L+ C+ L GK +H+F ++ G + TSL+DMY KCG++D
Sbjct: 467 TPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQR 526
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F MP D+VSW+ IIVG G +G+ + A+ ++ + ++S +KPN + FL VLS+C H GL
Sbjct: 527 CFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGL 586
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VE+ I+ SM ++G+ P+LEH+ C+VDLL +AG ++A L + P + +L
Sbjct: 587 VEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIIL 646
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC + N +L IA +L P D +V L++ YA++ W+ + + + LG KK
Sbjct: 647 DACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKK 706
Query: 659 -AGMSWIEV 666
G S+I++
Sbjct: 707 IPGWSFIDI 715
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 11/344 (3%)
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+SA + +N++I+ + + + + + + + + D+YTF S LKAC +L F+
Sbjct: 27 PSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFS 86
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
L +H I+ SG LD + S+LI+ YA+ G A ++F +P+++VV W+ +I
Sbjct: 87 --LGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGC 144
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++ G A+ LF +M + + S+L S LA + + +H + GF
Sbjct: 145 YSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGF-MS 200
Query: 457 DITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
DI L+ S++ MY KC I+ LF +M +RD+VSW ++ Q G E + + M
Sbjct: 201 DINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMR 260
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGC 574
+P+ TF VLS G ++ + ++ + L+ H+E ++ L G G
Sbjct: 261 IQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKG--GN 318
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
D A ++ E D +W +M+ + + + Q+L
Sbjct: 319 IDIAFRMF-ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQML 361
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 31/287 (10%)
Query: 365 LYARLGNVKSALELFHRLPKKDVV-AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
L +R G + + L H + +++ +I + G + + M+ ++ + +
Sbjct: 11 LLSRSGLKRYVVSLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAY 70
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
S+LK CS L G +H + G + +SLI+ Y K G D +F FM
Sbjct: 71 TFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFM 130
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA--------CRH 535
PER+VV WT II + GR EA + F EM + ++P+ +T L +L C H
Sbjct: 131 PERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLH 190
Query: 536 AGLVEEAW----TIFTSMKPEYGLEPHLEHYYCMVDLL---------------GQAGCFD 576
+ + + SM YG ++E+ + D + Q G
Sbjct: 191 GSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYIC 250
Query: 577 DAEQLIAEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
+ L+ M F+PD + S+L + KL + Q+L T
Sbjct: 251 EVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRT 297
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L+ C + GK +H +I+ GL I +L+ MY L+ A + F++M
Sbjct: 473 IVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMP 532
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VSW+ ++ Y + + A+R Y+ LE G ++PN ++ +VL +CS +G ++ G
Sbjct: 533 SHDLVSWSAIIVGYGYHGKGETALRFYSKFLESG-MKPNHVIFLSVLSSCSHNGLVEQGL 591
Query: 126 LIHERITRE 134
I+E +TR+
Sbjct: 592 NIYESMTRD 600
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 309/626 (49%), Gaps = 76/626 (12%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK---CGSLTRKLFD 162
F+ +A++ G +D R + + E+ + V N L+ YVK CG + +
Sbjct: 43 FVANALVAMYGGFGFMDDARRVFDEAGSER---NAVSWNGLMSAYVKNDQCGDAIQVFGE 99
Query: 163 ------QYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
Q + + S N + + G+QVHA V+ G+EK+ T +L+DMY+K G
Sbjct: 100 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 159
Query: 217 IDDGLALFNFMPERDVVSWTGIIVG----------------------------------- 241
+D +F MP+ DVVSW +I G
Sbjct: 160 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 219
Query: 242 CFECSCFTLS--------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
C F L LVDMY+ + L +A K+FD S +
Sbjct: 220 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS------H 273
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
++ LWN++ISG +++EA ++ + G+ ++ T + LK+ +L ++
Sbjct: 274 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA--TR 331
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVH L G+ D V + LID Y + + A+ +F D++A + +I ++
Sbjct: 332 QVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD 391
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
A LF +M+ + + F++SS+L C+ L++ +GKQVHA +KR F +
Sbjct: 392 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 451
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+ Y KCG I+D F +PER VVSW+ +I G Q+G K A+ F M+ + P
Sbjct: 452 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 511
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N IT VL AC HAGLV+EA F SMK +G++ EHY CM+DLLG+AG DDA +L
Sbjct: 512 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 571
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
+ MPF+ + ++W ++L A H + +L + AE+L PE +V+L+N YA+ GMW
Sbjct: 572 VNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMW 631
Query: 642 DSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ ++KVRK K +K+ MSW+EV
Sbjct: 632 NEVAKVRKLMKDSNIKKEPAMSWVEV 657
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 242/503 (48%), Gaps = 32/503 (6%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R+I G+ +H +++ G +D+FT N L+ MY ++ A +F++M ++VSW
Sbjct: 119 CTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSW 178
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++ N + AI L M G V PN FM S++LKAC+ +G DLGR IH +
Sbjct: 179 NALISGCVLNGHDHRAIELLLQMKSSGLV-PNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS----GGK 186
+ + D + L+DMY K L K+FD S + ++ LWN+++S GG+
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS------HRDLILWNALISGCSHGGR 291
Query: 187 QVHAFCVKRGFEKE--DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
AF + G KE V T+L + ++ A R V + I F+
Sbjct: 292 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA------TRQVHALAEKIGFIFD 345
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
++ L+D Y C+ L +A ++F++ SS G++ SMI+ + E AI
Sbjct: 346 AH--VVNGLIDSYWKCSCLSDAIRVFEECSS------GDIIAVTSMITALSQCDHGEGAI 397
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G+ D + +S L AC +L + QVH ++ + D G+ L+
Sbjct: 398 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ--GKQVHAHLIKRQFMSDAFAGNALVY 455
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
YA+ G+++ A F LP++ VV+WS +I G +HG A LF M++ + N
Sbjct: 456 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 515
Query: 425 ISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
++SVL C+ + K+ ++ G ++ + + +ID+ + G++DD + L M
Sbjct: 516 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 575
Query: 484 PERDVVSWTGIIVGCGQNGRAKE 506
P + S G ++G + + E
Sbjct: 576 PFQANASVWGALLGASRVHKDPE 598
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 203/545 (37%), Gaps = 128/545 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+ +H +IK D + G L+ MYA L+DA K+FD M+ +++
Sbjct: 217 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL 276
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W +++ + R + A ++ + + G + N +AVLK+ + R +H
Sbjct: 277 ILWNALISGCSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQVHA 335
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAY--------------G 173
+ +D ++N L+D Y KC L+ ++F++ S+ A G
Sbjct: 336 LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG 395
Query: 174 NVALWNSML------------------------SGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ ML GKQVHA +KR F + +L+
Sbjct: 396 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 455
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
Y KCG I+D F+ +PER VVSW+ +I G
Sbjct: 456 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGG---------------------------- 487
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
A +G AL L + G+ + T TS L AC
Sbjct: 488 ------LAQHGHGKRAL------------------ELFGRMVDEGINPNHITMTSVLCAC 523
Query: 330 --INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
L++ R+ + + E Y S +IDL R G + A+EL + +P + +
Sbjct: 524 NHAGLVDEAKRYFNSMKEMFGIDRTEEHY---SCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 387 VVAWSGLIMGCTKHGLNSLAYL----LF-------------------RDMINSNQDVNQF 423
W L+ H L L LF M N V +
Sbjct: 581 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 640
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ S +K ++ + +VH F V D + ++Y K E+ D ++ ++
Sbjct: 641 MKDSNIKKEPAMSWVEVKDKVHTFIVG------DKSHPMTKEIYSKLDELGDLMSKAGYI 694
Query: 484 PERDV 488
P DV
Sbjct: 695 PNVDV 699
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N+F + VLK C+ + G QVHA + GF + +L+ MY G +DD +F
Sbjct: 9 NEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVF 65
Query: 481 -KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
+ ER+ VSW G++ +N + +AI F EM+ S ++P E F V++AC + +
Sbjct: 66 DEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI 125
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ + +M G E + +VD+ + G D A + +MP D W +++
Sbjct: 126 DAGRQVH-AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALIS 183
Query: 600 AC 601
C
Sbjct: 184 GC 185
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 229/773 (29%), Positives = 364/773 (47%), Gaps = 131/773 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE------ 63
L+ C ++ GK++H ++ G D F +L++MY L+ A ++FD
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 64 -MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL- 121
++ +++ W +M+ Y +R + + ML +G V P+ F S V+ G+
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGNFR 185
Query: 122 -DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALW 178
+ G+ IH + R L+ D+ L L+DMY K G ++F + + + NV LW
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS-----NVVLW 240
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N M+ G G+Q+H VK
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDG-------------------------------LAL 223
G + TSL+ MY KCG + + L L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 224 FNFMPERDVV--SWT-GIIVGCFECSCFTL-----------------------SALVDMY 257
F FM ++ V+ S+T ++ C CS L SAL+ +Y
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISC--CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS--GM 315
S C C+ D Y + + ++ W S+ISG N + +EA+ + + +
Sbjct: 419 SKCG--CDP----DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
DS TS AC L RF LQVHG ++ +G L+ VGS+LIDLY++ G + A
Sbjct: 473 KPDSDIMTSVTNACAGLEAL--RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
L++F + +++VAW+ +I +++ L L+ LF M++ + I+SVL S
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
ASL +GK +H + ++ G + +LIDMY+KCG +FK M + +++W +I
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G +G A++ F EM ++ P+++TFL ++SAC H+G VEE IF MK +YG+
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP++EHY MVDLLG+AG ++A I MP + D +IW +L A TH+N +L + AE
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+LL PE S YV L N+Y G+ + +K+ K+ G K+ G SWIEVS
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 243/524 (46%), Gaps = 39/524 (7%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS 165
F + ++LKACS +L G+ IH + YD + +L++MYVKCG L + +
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV-QVFD 119
Query: 166 NWAASAYG----NVALWNSMLSGGKQVHAF-----CVKR----GFEKEDVTLTSLIDMYL 212
W+ S G +V +WNSM+ G + F C +R G + +L+ ++ +
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 213 KCGEI--DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
K G ++G + FM + + F +AL+DMY + +A ++F
Sbjct: 180 KEGNFRREEGKQIHGFM-----------LRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF 228
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ + NV LWN MI G+ + E ++ L ++ + + S +FT AL AC
Sbjct: 229 VEIEDKS-----NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+ NS F Q+H +V G D V ++L+ +Y++ G V A +F + K + W
Sbjct: 284 Q--SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ ++ ++ A LF M + + F +S+V+ CS L GK VHA K
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
R + ++L+ +Y KCG D +FK M E+D+V+W +I G +NG+ KEA+
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 511 FQEMI--QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M LKP+ V +AC + + SM + GL ++ ++DL
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDL 520
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+ G + A ++ M + W SM+ +C + NN +SI
Sbjct: 521 YSKCGLPEMALKVFTSMS-TENMVAWNSMI-SCYSRNNLPELSI 562
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 256/561 (45%), Gaps = 35/561 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C Q + G+ +HC ++K GL D + +LLSMY+ + +A +F + K
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W MV AY N A+ L+ M + SV P+ F S V+ CS+ G + G+ +H
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + ++ + + + LL +Y KCG D Y + + ++ W S++SG
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDP----DAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF-MPERDVVSWTGIIVGCF 243
GK A V + +D +L D+ GL F + + TG+++
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL--- 509
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F S+L+D+YS C + A K+F S+ N+ WNSMIS Y N E +
Sbjct: 510 --NVFVGSSLIDLYSKCGLPEMALKVFTSMST------ENMVAWNSMISCYSRNNLPELS 561
Query: 304 ITLLSHIHSSGMCIDSYTFTS---ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
I L + + S G+ DS + TS A+ + +LL S +HG + G D + +
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-----LHGYTLRLGIPSDTHLKN 616
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LID+Y + G K A +F ++ K ++ W+ +I G HG A LF +M + +
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ S++ C+ + GK + F + G E +++D+ + G +++ +
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 480 FKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE-ITFLGVLSACRHAG 537
K MP E D W ++ + + I ++++ R++P T++ +++ AG
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL--RMEPERGSTYVQLINLYMEAG 794
Query: 538 LVEEAWTIFTSMKPEYGLEPH 558
L EA + MK E GL
Sbjct: 795 LKNEAAKLLGLMK-EKGLHKQ 814
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLS-HIHSSGMCIDSYTFTSALKACINLLNFN 336
A +Y + A NS I + + +A+ L S H SS +TF S LKAC L N +
Sbjct: 18 ADSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLS 77
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF-------HRLPKKDVVA 389
+ +HG +V G+ D + ++L+++Y + G + A+++F + +DV
Sbjct: 78 --YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTV 135
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR--GKQVHAF 447
W+ +I G K FR M+ + F +S V+ V + RR GKQ+H F
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 448 CVKRGFEKEDITLTSLIDMYLKCG-EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ + + T+LIDMY K G ID + + +VV W +IVG G +G +
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
++ + + +K +F G L AC +
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 328/663 (49%), Gaps = 42/663 (6%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ GKS+H ++K G TGN++L Y +L+ A +FD M ++ VSW M+
Sbjct: 65 VRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHG 124
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+ S + + + + EPN + AC G ++ G +H I R
Sbjct: 125 HLSRGASDKGLWWFRQA-RVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLD 183
Query: 139 DTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA------- 190
+ N+LL MY +LFD+ +V W+ M+ G Q
Sbjct: 184 IPSVQNSLLSMYADNDMERAEELFDEMCE------RDVISWSVMIGGYVQTGEAKMALQL 237
Query: 191 ---FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
E + +T+ S++ G+I G ++ +I +
Sbjct: 238 FLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGV-----------VICRGLDYDL 286
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++++DMYS C+ A K F++ N WNS+ISG V E++ EA++L
Sbjct: 287 FVGNSIIDMYSKCDDHESAFKAFNEMPC------RNTVSWNSIISGLVRTEKHSEALSLF 340
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ +G D T + L++C ++ F +F +H +++ GYEL+ V ++LID Y
Sbjct: 341 YSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHSIVIRWGYELNEFVINSLIDAY 397
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
++ ++ A +LF RL KD V+WS +I G G A LF++M + + N I
Sbjct: 398 SKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTIL 457
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+L+ S A L+R K H ++RG E T+++DMY KCGEI F +PE+
Sbjct: 458 SLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEK 517
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
++VSW +I CG NG A++A+A EM LKPN +T L VLSAC H GLVEE + F
Sbjct: 518 NIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFF 577
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPDKTIWASMLKACETH 604
+M ++G+EP LEHY CMVD+L +AG + A LI +MP + +W ++L AC +
Sbjct: 578 ENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSS 637
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK-KAGMSW 663
N++L + A ++L P+ + Y + S++YA G+W +++R K G + AG S
Sbjct: 638 GNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSL 697
Query: 664 IEV 666
+ V
Sbjct: 698 VHV 700
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 225/542 (41%), Gaps = 125/542 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
++ +V A+ C ++++G +H II+ G N+LLSMYAD + A +LF
Sbjct: 149 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELF 207
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DEM ++++SW+ M+ Y A++L+ M S+E +G +VLKAC+ +GD+
Sbjct: 208 DEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDI 267
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+GR +H + L+YD + N+++DMY KC F ++ N WNS+
Sbjct: 268 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDD-HESAFKAFNEMPCR---NTVSWNSI 323
Query: 182 LSG-----------------GKQ---------------------------VHAFCVKRGF 197
+SG GK +H+ ++ G+
Sbjct: 324 ISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY 383
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS----------- 246
E + + SLID Y KC I+ LF+ + +D VSW+ +I G C
Sbjct: 384 ELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 443
Query: 247 ------------------CFTLS--------------------------ALVDMYSNCNV 262
F++S A++DMY+ C
Sbjct: 444 MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGE 503
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ +RK FDQ N+ W +MI+ +N +A+ LLS + G+ + T
Sbjct: 504 IGLSRKAFDQIPE------KNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTT 557
Query: 323 TSALKACIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
S L AC + L+ F +Q HG V G E Y S ++D+ +R G + SA+
Sbjct: 558 LSVLSACSHGGLVEEGLSFFENMVQDHG--VEPGLE-HY---SCMVDMLSRAGKLNSAMN 611
Query: 378 LFHRLPKK---DVVAWSGLIMGCTKHGLNSL-AYLLFRDMINSNQDVNQFIISSVLKVCS 433
L ++P++ W L+ C G + L A FR + Q + ++S + S
Sbjct: 612 LIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAAS 671
Query: 434 CL 435
L
Sbjct: 672 GL 673
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L+ C I G+S+H +I GL D+F GN+++ MY+ A K
Sbjct: 249 LDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKA 308
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+EM +N VSW ++++ ++ + A+ L+ M + G + +L++C D
Sbjct: 309 FNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG-FRADEVTLVNLLQSCKYFVD 367
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS-----NWAASAYG 173
+ IH + R E + ++N+L+D Y KC L KLFD+ +W+A G
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 427
Query: 174 ---------NVALWNSM------------------------LSGGKQVHAFCVKRGFEKE 200
+AL+ M L K H ++RG E
Sbjct: 428 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAE 487
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
T+++DMY KCGEI F+ +PE+++VSW +I C
Sbjct: 488 VAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAAC 529
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 197/680 (28%), Positives = 349/680 (51%), Gaps = 42/680 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL L+ CG+ R I+ G LHC ++K G + F N L+SMYA L+ A +L
Sbjct: 160 LDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRL 219
Query: 61 FDEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD K + V W +++++Y+++ + ++L+ M G N + + L AC
Sbjct: 220 FDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPAS-NSYTIVSALTACEGFS 278
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVAL 177
LG+ IH + + ++ + N L+ MY +CG + ++ +N +V
Sbjct: 279 YAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNN------ADVVT 332
Query: 178 WNSMLSGGKQ-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WNS++ G Q + FC + G + ++V+LTS+I + + G+ L ++
Sbjct: 333 WNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVI 392
Query: 229 ERDVVSW-TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
+ W + ++VG + L+DMYS CN+ C + F ++ W
Sbjct: 393 KH---GWDSNLLVG---------NTLIDMYSKCNLTCYMGRAFLMMHE------KDLISW 434
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
++I+GY LN+ + EA+ L + M ID S L+AC L + ++H I
Sbjct: 435 TTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSM--LIVKEIHCHI 492
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ G +D ++ + L+D+Y + N+ A +F + KDVV+W+ +I +G + A
Sbjct: 493 LRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAV 551
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LFR M + + + +L + L++L++G+++H + +++GF E +++DMY
Sbjct: 552 ELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMY 611
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
CG++ A+F + + ++ +T +I G +G K ++ F +M + P+ I+FL
Sbjct: 612 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFL 671
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+L AC HAGL++E M+ EY LEP EHY C+VD+LG+A C +A + + M
Sbjct: 672 ALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKT 731
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+P +W ++L AC +H+ ++ I A++LL P++P V++SNV+A G W+ + KV
Sbjct: 732 EPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 791
Query: 648 RKAGKKLG-EKKAGMSWIEV 666
R K G EK G SWIE+
Sbjct: 792 RAKMKASGMEKHPGCSWIEM 811
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 135/266 (50%), Gaps = 9/266 (3%)
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
K+FD+ A A WN++I YV N + A+ + ++ G+ +D Y+F LK
Sbjct: 117 KVFDEMRDRTAFA------WNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLK 170
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-D 386
AC L + R ++H ++V G+ + + L+ +YA+ ++ +A LF +K D
Sbjct: 171 ACGKLRDI--RSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGD 228
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V W+ ++ + G + LFR+M + N + I S L C + + GK++HA
Sbjct: 229 AVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHA 288
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K E +LI MY +CG++ + + + M DVV+W +I G QN KE
Sbjct: 289 AVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKE 348
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSA 532
A+ +F +MI + KP+E++ V++A
Sbjct: 349 ALQFFCDMIAAGHKPDEVSLTSVIAA 374
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
S ++F + + AW+ LI +G + A ++R+M ++ + +LK C
Sbjct: 114 SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACG 173
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWT 492
L +R G ++H VK GF + +L+ MY K + LF E+ D V W
Sbjct: 174 KLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWN 233
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
I+ +G++ E + F+EM + N T + L+AC
Sbjct: 234 SILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTAC 274
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 204/736 (27%), Positives = 355/736 (48%), Gaps = 89/736 (12%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
++ E+++ C RSI + LH ++I GL IF N+LL+MY++ ++DA+++F
Sbjct: 5 QKFYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGG 64
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM--------YSAVLKAC 115
+ N+ SW TM++ + + + A +L+ M E SV N M A +KA
Sbjct: 65 IMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKAS 124
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYG 173
G L L +H + DT + ++LDMY+KCG++ +K+F + N
Sbjct: 125 GSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPN------P 178
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFE-------KEDVTLTSLIDMYLKCG----EIDDGLA 222
++ WNSM+ G + + VK+ E ++ V+ ++I + + G ++ L
Sbjct: 179 SLFCWNSMIYGYSKYGS--VKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLE 236
Query: 223 LFNFMPERDVVSWTGIIVGCFEC-----------------SCFTLSA---LVDMYSNCNV 262
++N + +++ ++ C C + A L+DMY+ C
Sbjct: 237 MWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGR 296
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L AR++FD + N W S+I G EEA+ L + + + D +T
Sbjct: 297 LESARQVFDGLTE------HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTL 350
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L C++ + + Q+H +T G + V + L+ +YA+ G+V A F +
Sbjct: 351 ATVLGVCLSQKDIS--IGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELM 408
Query: 383 PKKDVVAWSGLIMGCTKHG-------------------LNSL--AYL----------LFR 411
P +D+++W+ +I ++ G NS+ Y+ ++
Sbjct: 409 PIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYI 468
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M+ + S+ + C+ LA L G Q+ A K GF S++ MY +CG
Sbjct: 469 QMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCG 528
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+I++ +F + +++VSW ++ G QNG+ ++ I F++M+ P++I+++ VLS
Sbjct: 529 QIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLS 588
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
C H+G V E F SM ++G+ P EH+ CMVDLLG+AG + A+ LI +MPFKP+
Sbjct: 589 GCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNA 648
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
IW ++L AC H NTKL + + LL E P Y +L+N+Y+ G ++ VRK
Sbjct: 649 AIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLM 708
Query: 652 KKLGEKK-AGMSWIEV 666
+ G +K G SWIEV
Sbjct: 709 RDKGVRKNPGCSWIEV 724
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 341/657 (51%), Gaps = 39/657 (5%)
Query: 22 GKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ LHC +K G + ++ G +L+ MY S+ + ++F+ M +KN+V+WT+++T
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ + + L+ M G + PN F +++VL A + G LDLG+ +H + +
Sbjct: 178 HAQMHSEVMALFFRMRAEG-IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSV 236
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK-------QVHAF 191
+ N+L++MY KCG + + +F NW + ++ WN++++G + + F
Sbjct: 237 FVCNSLMNMYAKCGLVEDAKSVF----NWMETR--DMVSWNTLMAGLQLNECELEALQLF 290
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
R + +T ++ + C + LAL + + ++ F + ++
Sbjct: 291 HESRATMGK-MTQSTYATVIKLCANLKQ-LALARQL-------HSCVLKHGFHLTGNVMT 341
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
AL D YS C L +A +F + NV W ++ISG + N A+ L S +
Sbjct: 342 ALADAYSKCGELADALNIFSM-----TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ + +T+++ LKA +++L Q+H ++ + Y+ VG+ L+ Y++ G+
Sbjct: 397 EDRVMPNEFTYSAMLKASLSIL------PPQIHAQVIKTNYQHIPSVGTALLASYSKFGS 450
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ AL +F + +KDVVAWS ++ + G A LF M N+F ISSV+
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510
Query: 432 CSCL-ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+C A + +G+Q HA +K + ++L+ MY + G ID +F+ +RD+VS
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS 570
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G Q+G + +AI F++M S ++ + +TFL V+ C H GLV E F SM
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMV 630
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++ + P +EHY CMVDL +AG D+ LI +MPF +W ++L AC H N +L
Sbjct: 631 RDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELG 690
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
A++LL+ P D S YV+LSN+YA G W +VRK + +K+AG SWI++
Sbjct: 691 KFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQI 747
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 9/353 (2%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR D+ A+ N L++ G V E + S G+ +DS T +
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMV-----PEVLDQFSVARRGGVLVDSATLSCV 105
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPK 384
LKAC ++ + Q+H L V G++ + G++L+D+Y + G+V +E+F +PK
Sbjct: 106 LKACRSVPD--RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
K+VV W+ L+ GC ++S LF M N F +SVL + +L G++V
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
HA VK G SL++MY KCG ++D ++F +M RD+VSW ++ G N
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
EA+ F E + K + T+ V+ C + + A + + + ++G
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVL-KHGFHLTGNVMTA 342
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+ D + G DA + + + W +++ C + + L ++ ++
Sbjct: 343 LADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRM 395
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ QG+ H IKY I + L+SMY+ +++ A +F+ +++VSW +M++
Sbjct: 518 VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISG 577
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KLE 137
Y + AI + M E ++ +G + AV+ C+ +G + G+ + + R+ K+
Sbjct: 578 YAQHGYSMKAIETFRQM-EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKIN 636
Query: 138 YDTVLMNTLLDMYVKCGSLTRKL 160
++D+Y + G L +
Sbjct: 637 PTMEHYACMVDLYSRAGKLDETM 659
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 201/645 (31%), Positives = 333/645 (51%), Gaps = 41/645 (6%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ + N ++ Y +L+ A LFD M ++++V+WT ++ Y + R A L+ M
Sbjct: 71 KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM--NTLLDMYVKC 153
+G V P+ + +L + ++ +H + K+ YD+ LM N+LLD Y K
Sbjct: 131 CRHGMV-PDHITLATLLSGFTEFESVNEVAQVHGHVV--KVGYDSTLMVCNSLLDSYCK- 186
Query: 154 GSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVKR--GFEKEDVTL 204
TR L + A + +N++L+G + ++ F + GF + T
Sbjct: 187 ---TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTF 243
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVL 263
+++ ++ +I+ G + +F +V C F + F +AL+D YS + +
Sbjct: 244 AAVLTAGIQMDDIEFGQQVHSF------------VVKCNFVWNVFVANALLDFYSKHDRI 291
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
EARKLF + +Y N +I+ N + EE++ L + + + F
Sbjct: 292 VEARKLFYEMPEVDGISY------NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFA 345
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L N LN Q+H + + + +VG++L+D+YA+ A +F L
Sbjct: 346 TLLSIAANSLNL--EMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLA 403
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ V W+ LI G + GL+ LF +M + + +S+L+ C+ LASL GKQ
Sbjct: 404 HQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQ 463
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H+ ++ G + ++L+DMY KCG I + L +F+ MP R+ VSW +I QNG
Sbjct: 464 LHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGD 523
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
A+ F++MI S L+PN ++FL +L AC H GLVEE F SM Y LEP EHY
Sbjct: 524 GGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYA 583
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP- 622
MVD+L ++G FD+AE+L+A MPF+PD+ +W+S+L +C H N +L A+QL
Sbjct: 584 SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGL 643
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
D + YV +SN+YA G WDS+ KV+KA ++ G +K SW+E+
Sbjct: 644 RDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEI 688
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 227/489 (46%), Gaps = 29/489 (5%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ + +H ++K G + N+LL Y SL A LF MA K+ V++ ++T
Sbjct: 154 SVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLT 213
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+ + AI L+ M + G P+ F ++AVL A D++ G+ +H + +
Sbjct: 214 GYSKEGFNHDAINLFFKMQDLG-FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFV 272
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL----WNSMLSGGKQVHAF 191
++ + N LLD Y K + RKLF + +Y NV + WN + ++
Sbjct: 273 WNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY-NVLITCCAWNGRVEESLELFRE 331
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
F++ +L+ + ++ G + + D +S ++VG +
Sbjct: 332 LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAIS--EVLVG---------N 380
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+LVDMY+ C+ EA ++F A A+ + W ++ISGYV +E+ + L +H
Sbjct: 381 SLVDMYAKCDKFGEANRIF------ADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMH 434
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ + DS T+ S L+AC NL + Q+H I+ SG + GS L+D+YA+ G+
Sbjct: 435 RAKIGADSATYASILRACANLASLT--LGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+K AL++F +P ++ V+W+ LI ++G A F MI+S N S+L
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
Query: 432 CSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVV 489
CS + G Q ++ E S++DM + G D+ L MP E D +
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612
Query: 490 SWTGIIVGC 498
W+ I+ C
Sbjct: 613 MWSSILNSC 621
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 188/449 (41%), Gaps = 56/449 (12%)
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ V A +K GF+ + +L+ G++ LF+ MP ++V+S +I+G
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMG---- 82
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y L AR LFD + +V W +I GY + + EA
Sbjct: 83 -----------YLKSGNLSTARSLFD------SMVQRSVVTWTMLIGGYAQHNRFLEAFN 125
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + GM D T + L + N QVHG +V GY+ +V ++L+D
Sbjct: 126 LFADMCRHGMVPDHITLATLLSGFTEFESVNE--VAQVHGHVVKVGYDSTLMVCNSLLDS 183
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + ++ A LF + +KD V ++ L+ G +K G N A LF M + ++F
Sbjct: 184 YCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTF 243
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
++VL + + G+QVH+F VK F +L+D Y K I + LF MPE
Sbjct: 244 AAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPE 303
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-----GLVE 540
D +S+ +I C NGR +E++ F+E+ +R + F +LS ++ G
Sbjct: 304 VDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQI 363
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA-------------------------GCF 575
+ I T E + L Y D G+A G
Sbjct: 364 HSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLH 423
Query: 576 DDAEQLIAEM---PFKPDKTIWASMLKAC 601
+D +L EM D +AS+L+AC
Sbjct: 424 EDGLKLFVEMHRAKIGADSATYASILRAC 452
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 171/446 (38%), Gaps = 121/446 (27%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
Q I+ G+ +H ++K ++F N LL Y+ + +A KLF EM + +S+
Sbjct: 252 QMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNV 311
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++T N R ++ L+ L++ + F ++ +L + S +L++GR IH +
Sbjct: 312 LITCCAWNGRVEESLELFRE-LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVT 370
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
+ ++ N+L+DMY KC K + +A A+ + W +++SG
Sbjct: 371 DAISEVLVGNSLVDMYAKCD----KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG 426
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
GKQ+H+ ++ G + ++L+DM
Sbjct: 427 LKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDM 486
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
Y KCG I + L +F MP R+ VSW +I
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVSWNALI------------------------------- 515
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
S Y N A+ + SG+ +S +F S L AC
Sbjct: 516 ---------------------SAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACS 554
Query: 331 N-------LLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHR 381
+ L FNS +T Y+L+ ++++D+ R G A +L R
Sbjct: 555 HCGLVEEGLQYFNS----------MTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMAR 604
Query: 382 LP-KKDVVAWSGLIMGCTKHGLNSLA 406
+P + D + WS ++ C H LA
Sbjct: 605 MPFEPDEIMWSSILNSCRIHKNQELA 630
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 29/296 (9%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ G+ +H + I ++ GN+L+ MYA +A+++F ++A ++ V WT +++
Sbjct: 356 NLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALIS 415
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y ++L+ M + + Y+++L+AC+ L LG+ +H RI R
Sbjct: 416 GYVQKGLHEDGLKLFVEM-HRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCL 474
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHA 190
+ + L+DMY KCGS+ L + N WN+++S GG + +
Sbjct: 475 SNVFSGSALVDMYAKCGSIKEAL----QMFQEMPVRNSVSWNALISAYAQNGDGGHALRS 530
Query: 191 F--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
F + G + V+ S++ CG +++GL FN M + V E
Sbjct: 531 FEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQ----------VYKLEPRRE 580
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+++VDM EA KL + + +W+S+++ +++ E AI
Sbjct: 581 HYASMVDMLCRSGRFDEAEKLMARMPFEP-----DEIMWSSILNSCRIHKNQELAI 631
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C S+ GK LH RII+ G ++F+G+ L+ MYA S+ +A ++F EM +N
Sbjct: 449 LRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNS 508
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++AY N A+R + M+ G ++PN + ++L ACS G ++ G
Sbjct: 509 VSWNALISAYAQNGDGGHALRSFEQMIHSG-LQPNSVSFLSILCACSHCGLVEEGLQYFN 567
Query: 130 RITR-EKLEYDTVLMNTLLDMYVKCG 154
+T+ KLE +++DM + G
Sbjct: 568 SMTQVYKLEPRREHYASMVDMLCRSG 593
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
R + V A +K GF+ + +L+ G++ LF MP ++V+S +I+G
Sbjct: 24 RHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGY 83
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
++G A + F M+Q + +T+ ++ EA+ +F M +G+ P
Sbjct: 84 LKSGNLSTARSLFDSMVQRSV----VTWTMLIGGYAQHNRFLEAFNLFADM-CRHGMVP 137
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 351/669 (52%), Gaps = 47/669 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ K LH ++ +G SQ+I L+++Y ++ + FD + +KNI SW ++++
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 78 AYTSNKRPNWAIRLYNHMLEY---GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
AY + + A+ N + G + P+ + + +LKAC D G+ +H + +
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQV 188
E D + +L+ +Y + G L K+F +V WN+M+SG G
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVF------VDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 189 HAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
A V G + + +T+ S++ + C + DD + V+ ++
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPV---CAQSDDVI--------NGVLIHLHVLKHGL 253
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F +AL++MYS L +A+ +FDQ ++ WNS+I+ Y N A
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQME------VRDLVSWNSIIAAYEQNNDPSTA 307
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNL 362
+ + G+ D T S L + + L+ + R + + G ++ + + D ++G+ L
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVS-LTSIFSQLS-DQRISRSILGFVIRREWLDKDVVIGNAL 365
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-- 420
+++YA+LG + A +F +LP+KD ++W+ L+ G T++GL S A + +M+ +D
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIP 424
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
NQ S++ S + +L++G ++HA +K + T LID+Y KCG ++D ++LF
Sbjct: 425 NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLF 484
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+P V W II G +GR +EA+ F++M+ R+K + ITF+ +LSAC H+GLV+
Sbjct: 485 YEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVD 544
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F M+ EYG++P L+HY CMVDLLG+AG + A +L+ MP +PD +IW ++L A
Sbjct: 545 EGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C+ + N +L ++ +++LL E+ YV+LSN+YA W+ + KVR + G K
Sbjct: 605 CKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTP 664
Query: 660 GMSWIEVSS 668
G S + V S
Sbjct: 665 GWSSVVVGS 673
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 43/281 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C Q + G +H ++K+GL D+F N L++MY+ F L DA +
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD+M +++VSW +++ AY N P+ A+R + M + G + P+ ++ S D
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM-QLGGIRPDLLTVVSLTSIFSQLSD 338
Query: 121 LDLGR-LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NW----- 167
+ R ++ I RE L+ D V+ N L++MY K G + +FDQ +W
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVT 398
Query: 168 ----------AASAYG----------NVALWNSM---------LSGGKQVHAFCVKRGFE 198
A AY N W S+ L G ++HA +K
Sbjct: 399 GYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ T LID+Y KCG ++D ++LF +P V W II
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAII 499
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 335/660 (50%), Gaps = 31/660 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR+ +S Q + LH +++K+ + + + LLS+Y+ L+D+ +LF+ +
Sbjct: 15 LRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPA 73
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
++W +++ YTS+ P+ ++ + ML G + P+ ++ +VLKAC++ DL+LG +H
Sbjct: 74 LAWKSVIRCYTSHGLPHKSLGSFIGMLASG-LYPDHNVFPSVLKACAMLMDLNLGESLHG 132
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
I R L++D N L++MY K L + G + + M + V
Sbjct: 133 YIIRVGLDFDLYTGNALMNMYSKLRFLKKS--------GRQRLGASQVLDEMTERTRSVR 184
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCG--EIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
V G + V+ + + C E + + ++ P + E
Sbjct: 185 TASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYR----------EMEA 234
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
L + S+ + RK+F+ ++ WN++I+G N E +T++
Sbjct: 235 CNLGQQIKDISHSMSVDSVRKIFEMMPE------KDLVSWNTIIAGNARNGLYGETLTMV 288
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + + DS+T +S L N + ++HG + G + + V S+LID+YA
Sbjct: 289 REMGGANLKPDSFTLSSVLPLIAE--NVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYA 346
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ V + +F L ++D ++W+ +I GC ++GL FR M+ + + SS
Sbjct: 347 KCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSS 406
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
++ C+ L +L GKQ+H + + GF++ +SL+DMY KCG I +F M RD
Sbjct: 407 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRD 466
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
+VSWT +I+GC +G A +AI F++M ++PN + F+ VL+AC HAGLV+EAW F
Sbjct: 467 MVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFN 526
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SM ++G+ P +EHY + DLLG+AG ++A I MP P ++WA++L AC H N
Sbjct: 527 SMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNV 586
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ +A ++L P++ Y++L+N+Y+ W +K R + ++ G K SWIEV
Sbjct: 587 DMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEV 646
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 205/711 (28%), Positives = 340/711 (47%), Gaps = 115/711 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+V L+ CG GK LH I+ G + D+ G +L+ MY + S+ D K+F+ M
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM 165
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++N+V+WT+++T Y + + + L+ M G V PN +++VL + G +DLG
Sbjct: 166 PKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEG-VWPNSVTFASVLSVVASQGMVDLG 224
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R +H + + + N+L++MY KCG + R +F ++ WN+++
Sbjct: 225 RRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF------CGMETRDMVSWNTLM 278
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
+G +Q+H+ +KRGF
Sbjct: 279 AGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFH 338
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+T+L+D Y K G++ + L +F M ++VVSWT +I GC +
Sbjct: 339 SYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQ------------- 385
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
G+V L A L S + G+
Sbjct: 386 -----------------------NGDVPL----------------AAALFSRMREDGVAP 406
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ +T+++ L A + + Q+H ++ + YE IVG+ L+ Y++L N + AL
Sbjct: 407 NDFTYSTILTASV------ASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALS 460
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC-SCLA 436
+F + +KDVV+WS ++ + G + A +F M N+F ISSV+ C S A
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ G+Q HA +K ++L+ MY + G I+ +F+ +RD+VSW ++
Sbjct: 521 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLS 580
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G +++A+ F++M ++ + +TFL V+ C HAGLVEE F SM +YG+
Sbjct: 581 GYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGIT 640
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P +EHY CMVDL +AG D+A LI M F +W ++L AC+ H N +L + AE+
Sbjct: 641 PTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEK 700
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
LL+ P D + YV+LSN+Y+ G W +VRK K +K+AG SWI++
Sbjct: 701 LLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQI 751
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 351/669 (52%), Gaps = 47/669 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ K LH ++ +G SQ+I L+++Y ++ + FD + +KNI SW ++++
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 78 AYTSNKRPNWAIRLYNHMLEY---GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
AY + + A+ N + G + P+ + + +LKAC D G+ +H + +
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQV 188
E D + +L+ +Y + G L K+F +V WN+M+SG G
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVF------VDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 189 HAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
A V G + + +T+ S++ + C + DD + V+ ++
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPV---CAQSDDVI--------NGVLIHLHVLKHGL 253
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F +AL++MYS L +A+ +FDQ ++ WNS+I+ Y N A
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQME------VRDLVSWNSIIAAYEQNNDPSTA 307
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNL 362
+ + G+ D T S L + + L+ + R + + G ++ + + D ++G+ L
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVS-LTSIFSQLS-DQRISRSILGFVIRREWLDKDVVIGNAL 365
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-- 420
+++YA+LG + A +F +LP+KD ++W+ L+ G T++GL S A + +M+ +D
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIP 424
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
NQ S++ S + +L++G ++HA +K + T LID+Y KCG ++D ++LF
Sbjct: 425 NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLF 484
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+P V W II G +GR +EA+ F++M+ R+K + ITF+ +LSAC H+GLV+
Sbjct: 485 YEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVD 544
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F M+ EYG++P L+HY CMVDLLG+AG + A +L+ MP +PD +IW ++L A
Sbjct: 545 EGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C+ + N +L ++ +++LL E+ YV+LSN+YA W+ + KVR + G K
Sbjct: 605 CKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTP 664
Query: 660 GMSWIEVSS 668
G S + V S
Sbjct: 665 GWSSVVVGS 673
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 43/281 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C Q + G +H ++K+GL D+F N L++MY+ F L DA +
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD+M +++VSW +++ AY N P+ A+R + M + G + P+ ++ S D
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM-QLGGIRPDLLTVVSLTSIFSQLSD 338
Query: 121 LDLGR-LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NW----- 167
+ R ++ I RE L+ D V+ N L++MY K G + +FDQ +W
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVT 398
Query: 168 ----------AASAYG----------NVALWNSM---------LSGGKQVHAFCVKRGFE 198
A AY N W S+ L G ++HA +K
Sbjct: 399 GYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ T LID+Y KCG ++D ++LF +P V W II
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAII 499
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 204/710 (28%), Positives = 340/710 (47%), Gaps = 111/710 (15%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A +LFD+ +++ ++ Y+ + A+ L+ + G + P+ + S VL C+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSG-LSPDSYTMSCVLSVCA 113
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGN 174
S + +G +H + + L + + N+L+DMY K G++ R++FD+ + +
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD------RD 167
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
V WNS+L+G G Q+HA
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------- 241
VK GFE E + SLI M K G + D +F+ M +D VSW +I G
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287
Query: 242 CFEC---------------------SCFTLSAL------------VDMYSNCNVLC---- 264
FE SC +L L + +N NVL
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMV 347
Query: 265 ---EARKLFDQYSSWA-ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ +++ D +S ++ +V W +MISGY+ N ++A+ L S + G+ + +
Sbjct: 348 ALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHF 407
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T+++ L ++ F ++H ++ + YE VG+ L+D + ++GN+ A+++F
Sbjct: 408 TYSTILTVQ------HAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE 461
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC-LASLR 439
+ KDV+AWS ++ G + G A +F + N+F S++ C+ AS+
Sbjct: 462 LIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVE 521
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
+GKQ HA+ +K +SL+ +Y K G I+ +FK ERD+VSW +I G
Sbjct: 522 QGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYA 581
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
Q+G+AK+A+ F+EM + L+ + ITF+GV+SAC HAGLV + F M ++ + P +
Sbjct: 582 QHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTM 641
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
EHY CM+DL +AG A +I MPF P T+W +L A H N +L + AE++++
Sbjct: 642 EHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIIS 701
Query: 620 TSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
P+ + YV+LSN+YA G W VRK K+ +K+ G SWIEV +
Sbjct: 702 LEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKN 751
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 232/556 (41%), Gaps = 101/556 (18%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +HC+ +K GL + GN+L+ MY ++ D ++FDEM +++VSW +++T Y+
Sbjct: 121 GEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSW 180
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N+ + L+ +++ P+ + S V+ A + G + +G IH + + E + +
Sbjct: 181 NRFNDQVWELFC-LMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERL 239
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNV----------ALWNSMLSG 184
+ N+L+ M K G L R +FD N W + G+V N L+G
Sbjct: 240 VCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG 299
Query: 185 GKQVHAF-----------------------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
K HA +K G LT+L+ KC EIDD
Sbjct: 300 AKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAF 359
Query: 222 ALFNFMPE-RDVVSWTGIIVGC-------------------------------------- 242
+LF+ M + VVSWT +I G
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV 419
Query: 243 -------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+E S +AL+D + + +A K+F+ + +V W++
Sbjct: 420 FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIET------KDVIAWSA 473
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
M++GY + EEA + + G+ + +TF S + AC + Q H +
Sbjct: 474 MLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINAC-TAPTASVEQGKQFHAYAIK 532
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
V S+L+ LYA+ GN++SA E+F R ++D+V+W+ +I G +HG A +
Sbjct: 533 LRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEV 592
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYL 468
F +M N +V+ V+ C+ + +G+ + + S +ID+Y
Sbjct: 593 FEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYS 652
Query: 469 KCGEIDDGLALFKFMP 484
+ G + + + MP
Sbjct: 653 RAGMLGKAMDIINGMP 668
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 197/472 (41%), Gaps = 106/472 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ AL + G ++ G +H ++K G + N+L+SM + L DA +FD M
Sbjct: 209 VIAALANQG---AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNME 265
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ VSW +M+ + N + A +N+M + +P +++V+K+C+ +L L R
Sbjct: 266 NKDSVSWNSMIAGHVINGQDLEAFETFNNM-QLAGAKPTHATFASVIKSCASLKELGLVR 324
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA-ASAYGNVALWNSMLSG 184
++H + + L + ++ L+ KC +++ D +S ++ +V W +M+SG
Sbjct: 325 VLHCKTLKSGLSTNQNVLTALMVALTKC----KEIDDAFSLFSLMHGVQSVVSWTAMISG 380
Query: 185 GKQ----------------------------------------VHAFCVKRGFEKEDVTL 204
Q +HA +K +EK
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVG 440
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------- 245
T+L+D ++K G I D + +F + +DV++W+ ++ G +
Sbjct: 441 TALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIK 500
Query: 246 -SCFTLSALVDMYSNCNVLCEARKLFDQY------------SSWAASAY---GNV----- 284
+ FT ++++ + E K F Y SS + Y GN+
Sbjct: 501 PNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHE 560
Query: 285 ----------ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--- 331
WNSMISGY + Q ++A+ + + + +D+ TF + AC +
Sbjct: 561 IFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGL 620
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ + F + ++ + E Y S +IDLY+R G + A+++ + +P
Sbjct: 621 VGKGQNYFNIMINDHHINPTME-HY---SCMIDLYSRAGMLGKAMDIINGMP 668
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 222/740 (30%), Positives = 356/740 (48%), Gaps = 107/740 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +S H K GL D F L+++Y F + + LF+EM +++
Sbjct: 159 LKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDV 218
Query: 70 VSWTTMVTAY-----------------TSNKRPN-WAIRLYNHML----EYGSVEP---- 103
V W M+ AY TS PN +RL + + E G V+
Sbjct: 219 VLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENG 278
Query: 104 ----------------NGFM----YSAVLK---------------------ACSLSGD-L 121
+G++ YSA+LK A ++ D L
Sbjct: 279 NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + L+ + N+L++MY K L R +F+ S ++ WN
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER------DLISWN 392
Query: 180 SMLSGGKQ----VHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
S+++G Q V A C+ + G + + T+TS++ + +GL+L +
Sbjct: 393 SVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLK---AASSLPEGLSLSKQIHVH 449
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ + F +AL+D YS + EA LF + + ++ WN+M
Sbjct: 450 AIKTNN-------VADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-------DLVAWNAM 495
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SGY + + + L + +H G D +T + LK C L N QVH + S
Sbjct: 496 MSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ--GKQVHAYAIKS 553
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GY+LD V S ++D+Y + G++ +A F +P D VAW+ LI GC ++G A +F
Sbjct: 554 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVF 613
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M ++F I+++ K SCL +L +G+Q+HA +K + TSL+DMY KC
Sbjct: 614 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKC 673
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G IDD LFK + ++ +W ++VG Q+G KEA+ F++M +KP+++TF+GVL
Sbjct: 674 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVL 733
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC H+GLV EA+ SM +YG++P +EHY C+ D LG+AG +AE LI M +
Sbjct: 734 SACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEAS 793
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS--LSKVR 648
+++ ++L AC +T+ +A +LL P D S YV+LSN+YA WD L++
Sbjct: 794 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 853
Query: 649 KAGKKLGEKKAGMSWIEVSS 668
G K+ +K G SWIEV +
Sbjct: 854 MKGHKV-KKDPGFSWIEVKN 872
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/586 (22%), Positives = 243/586 (41%), Gaps = 77/586 (13%)
Query: 105 GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD 162
GF+ A+ + DL LG+ H RI + + L+N L+ MY KCGSLT R++FD
Sbjct: 51 GFLRDAIS-----TSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFD 105
Query: 163 QYSN------------WAASAYGNVA-------------------------------LWN 179
+ +A S+ G V L +
Sbjct: 106 KMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHS 165
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ + H + K G + +D +L+++YLK G++ +G LF MP RDVV W ++
Sbjct: 166 GYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLML 225
Query: 240 VGCFE----------CSCFTLSALVDMYSNCNVL-------CEARKLFDQYSSWAASAYG 282
E S F S L +L EA ++ + ASA
Sbjct: 226 KAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVS 285
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+ N ++SGY+ Q + + S + D TF L + L + Q
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA--LGQQ 343
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
VH + + G +L V ++LI++Y +L + A +F+ + ++D+++W+ +I G + L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLT 461
A LF ++ + + ++SVLK S L L KQ+H +K + T
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+LID Y + + + LF D+V+W ++ G Q+ + + F M + +
Sbjct: 464 ALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERS 522
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
++ T VL C + + + ++K Y L+ + ++D+ + G A+
Sbjct: 523 DDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYVKCGDMSAAQF 580
Query: 581 LIAEMPFKPDKTIWASMLKAC-ETHNNTKLVSIIAE-QLLATSPED 624
+P PD W +++ C E + + + ++ +L+ P++
Sbjct: 581 AFDSIPV-PDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDE 625
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ CG +I QGK +H IK G D++ + +L MY ++ A FD +
Sbjct: 527 LATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 586
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V+WTT+++ N A+ +++ M G V P+ F + + KA S L+ GR
Sbjct: 587 VPDDVAWTTLISGCIENGEEERALHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGR 645
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + D + +L+DMY KCGS+ D Y + N+ WN+ML G
Sbjct: 646 QIHANALKLNCTSDPFVGTSLVDMYAKCGSID----DAYCLFKRIEMMNITAWNAMLVGL 701
Query: 186 KQ 187
Q
Sbjct: 702 AQ 703
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 205/683 (30%), Positives = 331/683 (48%), Gaps = 71/683 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C S++Q H + GL DI L+S+Y F DA +FD++ +
Sbjct: 63 LSKCTNIDSLRQA---HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDF 119
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W ++ Y N I+ Y+ ++++G + ++S LKAC+ DLD G+ IH
Sbjct: 120 YLWKVILRCYCLNNESFEVIKFYDLLMKHG-FGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+I + +D V++ LLDMY KCG + Y + NV W SM++G
Sbjct: 179 QIVKVP-SFDNVVLTGLLDMYAKCGEIK----SSYKVFEDITLRNVVCWTSMIAG----- 228
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC--- 242
Y+K ++GL LFN M E V+ ++ +++ C
Sbjct: 229 ---------------------YVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKL 267
Query: 243 -----------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
E S +++L+DMY C + AR++F+++S + ++
Sbjct: 268 RALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS------HVDLV 321
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
+W +MI GY N EA++L + G+ + T S L C L N +HG
Sbjct: 322 MWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGC--GLVGNLELGRSIHG 379
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L + G D V + L+ +YA+ + A +F +KD+VAW+ +I G +++G
Sbjct: 380 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 438
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL--TSL 463
A LF M + N ++S+ C+ L SL G +HA+ VK GF T+L
Sbjct: 439 ALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTAL 498
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+D Y KCG+ + +F + E++ ++W+ +I G G+ G K ++ F+EM++ + KPNE
Sbjct: 499 LDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNE 558
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
TF VLSAC H G+V E F+SM +Y P +HY CMVD+L +AG + A +I
Sbjct: 559 STFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 618
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
+MP +PD + + L C H+ L I+ +++L P+D S YV++SN+YA+ G W
Sbjct: 619 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQ 678
Query: 644 LSKVRKAGKKLG-EKKAGMSWIE 665
+VR K+ G K AG S +E
Sbjct: 679 AKEVRNLMKQRGLSKIAGHSIME 701
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 246/571 (43%), Gaps = 109/571 (19%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+AL+ C + + + GK +HC+I+K + TG LL MYA + ++K+F+++
Sbjct: 159 KALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG--LLDMYAKCGEIKSSYKVFEDITL 216
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+V WT+M+ Y N + L+N M E SV N + Y ++ AC+ L G+
Sbjct: 217 RNVVCWTSMIAGYVKNDLYEEGLVLFNRMRE-NSVLGNEYTYGTLVMACTKLRALHQGKW 275
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----WAASAYG------ 173
H + + +E + L+ +LLDMYVKCG ++ R++F+++S+ W A G
Sbjct: 276 FHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 335
Query: 174 ------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTS 206
N S+LSG G+ +H +K G +V +
Sbjct: 336 VNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVA-NA 394
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+ MY KC + D +F E+D+V+W II G
Sbjct: 395 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG------------------------- 429
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
F Q N EA+ L +++ + + T S
Sbjct: 430 ---FSQ------------------------NGSIHEALFLFHRMNTESVMPNGVTVASLF 462
Query: 327 KACINLLNFNSRFALQVH----GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
AC +L + +L + G + +S VG+ L+D YA+ G+ +SA +F +
Sbjct: 463 SACASLGSLAIGSSLHAYSVKLGFLASSSVH----VGTALLDFYAKCGDAESARLIFDTI 518
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
+K+ + WS +I G K G + LF +M+ Q N+ +SVL CS + GK
Sbjct: 519 EEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGK 578
Query: 443 QVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
+ + K F T ++DM + GE++ L + + MP + DV + + GCG
Sbjct: 579 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 638
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ R ++M+ L P++ ++ ++S
Sbjct: 639 HSRFDLGEIVIKKMLD--LHPDDASYYVLVS 667
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG +++ G+S+H IK G+ D N L+ MYA DA +F+ +
Sbjct: 358 IASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMES 416
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+IV+W ++++ ++ N + A+ L+ H + SV PNG +++ AC+ G L +G
Sbjct: 417 EKDIVAWNSIISGFSQNGSIHEALFLF-HRMNTESVMPNGVTVASLFSACASLGSLAIGS 475
Query: 126 LIHE-RITREKLEYDTVLMNT-LLDMYVKCGSL--TRKLFDQYS-----NWAA------- 169
+H + L +V + T LLD Y KCG R +FD W+A
Sbjct: 476 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGK 535
Query: 170 --SAYGNVALWNSMLSGGKQV-------------HAFCVKRG------------FEKEDV 202
G++ L+ ML ++ H V G F
Sbjct: 536 QGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTK 595
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALV 254
T ++DM + GE++ L + MP + DV + + GC S F L +V
Sbjct: 596 HYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 648
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 212/677 (31%), Positives = 331/677 (48%), Gaps = 45/677 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L H +SI + K+LHC +I G +S I + L YA + A KLFDEM + +
Sbjct: 22 LNHYAATQSISKTKALHCHVITGGRVSGHILS--TLSVTYALCGHIAYARKLFDEMPQSS 79
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++S+ ++ Y + + AI ++ M+ G P+G+ Y V KA + LG +I
Sbjct: 80 LLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVI 139
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H RI R D + N LL MY+ G + R +FD N +V WN+M+SG
Sbjct: 140 HGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNR------DVISWNTMISGY 193
Query: 185 --------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ + V G + + T+ S++ + ++ G + + E+ +
Sbjct: 194 YRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKI 253
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ +ALV+MY C + EAR +F + +V W MI+GY+
Sbjct: 254 EV-----------KNALVNMYLKCGRMDEARFVFGRMERR------DVITWTCMINGYIE 296
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ E A+ L + G+ ++ T S + AC + L N L HG + D
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCL--HGWAIRQKVCSDI 354
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
I+ ++LI +YA+ ++ +F + WS +I GC ++ L A LF+ M
Sbjct: 355 IIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRRE 414
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + N ++S+L + LA LR+ +H + K GF T L+ +Y KCG ++
Sbjct: 415 DVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 477 LALFKFMPER----DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+F + E+ DVV W +I G G +G A+ F EM++S + PNEITF L+A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H+GLVEE T+F+ M Y HY C+VDLLG+AG D+A LI +PF+P T
Sbjct: 535 CSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
IW ++L AC TH N +L + A +L PE+ YV+L+N+YA LG W + KVR +
Sbjct: 595 IWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMME 654
Query: 653 KLG-EKKAGMSWIEVSS 668
+G KK G S IE+ S
Sbjct: 655 NVGLRKKPGHSTIEIRS 671
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 269/490 (54%), Gaps = 32/490 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G+E + TSLI MY + G ++D +F+ RDVVS+T +I G
Sbjct: 85 GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG--- 141
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+++FD+ +V WN+MISGY +EA+
Sbjct: 142 ------------YASSGNIRSAQEMFDEI------PVKDVVSWNAMISGYAETGSYKEAL 183
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + L AC + + QVH I G+ + + + LID
Sbjct: 184 ELFKEMMKTNVRPDEGTMVTVLSACAQ--SRSVELGRQVHSWIDDHGFGSNLKIVNALID 241
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A LF L KDVV+W+ LI G T L A LLF++M+ S + N
Sbjct: 242 LYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 301
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT-----LTSLIDMYLKCGEIDDGLAL 479
I S+L C+ L ++ G+ +H + K+ +D+T TSLIDMY KCG+I+ +
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKK---LKDVTNAPSLRTSLIDMYAKCGDIEAAHQV 358
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F M + + SW +I G +GRA F M ++ ++P++ITF+G+LSAC H+G +
Sbjct: 359 FNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKL 418
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ IF SM +Y + P LEHY CM+DLLG +G F +A+++I MP +PD IW S+LK
Sbjct: 419 DLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLK 478
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC H N +L A L+ PE+P YV+LSN+YAT G WD ++KVR G KK
Sbjct: 479 ACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKV 538
Query: 659 AGMSWIEVSS 668
G S IE+ S
Sbjct: 539 PGCSSIEIDS 548
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 37/313 (11%)
Query: 263 LCEARKLFDQY----SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
C FD + S +A N +WN+M+ GY L+ A+ L + S G+ +
Sbjct: 6 FCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPN 65
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA---RL------ 369
SYTF LK+C F Q+HG ++ GYE D V ++LI +YA RL
Sbjct: 66 SYTFPFLLKSCAKSKAFEE--GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKV 123
Query: 370 ----------------------GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
GN++SA E+F +P KDVV+W+ +I G + G A
Sbjct: 124 FDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEAL 183
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF++M+ +N ++ + +VL C+ S+ G+QVH++ GF + +LID+Y
Sbjct: 184 ELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLY 243
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG+++ LF+ + +DVVSW +I G KEA+ FQEM++S PN++T +
Sbjct: 244 SKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIV 303
Query: 528 GVLSACRHAGLVE 540
+L AC H G ++
Sbjct: 304 SILPACAHLGAID 316
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 200/456 (43%), Gaps = 82/456 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK---------- 59
L+ C + ++ ++G+ +H ++K G D++ +L+SMYA L DAHK
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 60 ---------------------LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+FDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ VL AC+ S ++LGR +H I + ++N L+D+Y KCG +
Sbjct: 193 -NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ S +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 252 ACGLFEGLS------CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSI 305
Query: 208 IDMYLKCGEIDDGLALFNFMPE--RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+ G ID G + ++ + +DV + + ++L+DMY+ C +
Sbjct: 306 LPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSL-----------RTSLIDMYAKCGDIEA 354
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A ++F+ + + +++ WN+MI G+ ++ + L S + +G+ D TF
Sbjct: 355 AHQVFN------SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGL 408
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELF 379
L AC + + + L H + DY + L IDL G K A E+
Sbjct: 409 LSAC----SHSGKLDLGRH---IFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMI 461
Query: 380 HRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+P + D V W L+ C +HG LA R+++
Sbjct: 462 KTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/549 (22%), Positives = 213/549 (38%), Gaps = 146/549 (26%)
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
F A +F + N + W TM+ Y + P A++LY M+ G + PN + +
Sbjct: 13 FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLL-PNSYTFPF 71
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWA 168
+LK+C+ S + G+ IH + + E D + +L+ MY + G L K+FD+ S+
Sbjct: 72 LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131
Query: 169 ASAY----------GN---------------VALWNSMLSG------------------- 184
+Y GN V WN+M+SG
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 185 -------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
G+QVH++ GF + +LID+Y KCG+++
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF + +DVVSW +I G Y++ N+
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGG---------------YTHMNLY---------------- 280
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+EA+ L + SG + T S L AC +L +
Sbjct: 281 ---------------------KEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID--I 317
Query: 340 ALQVHGLI------VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+H I VT+ L ++LID+YA+ G++++A ++F+ + K + +W+ +
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLR----TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G HG + + LF M + + + +L CS L G+ + K
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI----FKSMT 429
Query: 454 EKEDITLT-----SLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
+ DIT +ID+ G + + K MP E D V W ++ C ++G + A
Sbjct: 430 QDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA 489
Query: 508 IAYFQEMIQ 516
++ + +++
Sbjct: 490 ESFARNLMK 498
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 38/336 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C Q RS++ G+ +H I +G ++ N L+ +Y+ + A LF
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K++VSW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 257 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTIVSILPACAHLGAI 315
Query: 122 DLGRLIHERITREKLEYDTV--LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
D+GR IH I ++ + L +L+DMY KCG + + + + + +++ WN
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEA----AHQVFNSMLHKSLSSWN 371
Query: 180 SMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ G G + + K G E +D+T L+ G++D G +F M +
Sbjct: 372 AMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQD 431
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AAS 279
++ GC ++D+ + + EA+++ W A
Sbjct: 432 YDITPKLEHYGC----------MIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACR 481
Query: 280 AYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GN+ L S + + +N + LLS+I+++
Sbjct: 482 RHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A+ +F + + + + W+ ++ G A L+ MI+ N + +LK C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ G+Q+H +K G+E + TSLI MY + G ++D +F RDVVS+T +
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 495 IV-------------------------------GCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I G + G KEA+ F+EM+++ ++P+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
T + VLSAC + VE + + + ++G +L+ ++DL + G + A L
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWID-DHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
+ K D W +++ TH N +++ Q + S E P+ ++S
Sbjct: 258 GLSCK-DVVSWNTLIGGY-THMNLYKEALLLFQEMLRSGESPNDVTIVS 304
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 207/740 (27%), Positives = 340/740 (45%), Gaps = 110/740 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++HC ++ GK +H R+ + L D F N+ + +Y+ + A +FD + KNI
Sbjct: 13 VQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNI 72
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE--------------------------- 102
SW ++ AY + +A RL+ M + +V
Sbjct: 73 FSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLD 132
Query: 103 ---PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG----- 154
P+ ++ V AC D D GR H + + LE + ++N LL MY KCG
Sbjct: 133 GVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADA 192
Query: 155 -SLTRKLFDQYSNWAASAYGNVA----------LWNSMLSGG------------------ 185
+ R + + + G +A L+ ML G
Sbjct: 193 LRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKG 252
Query: 186 ----------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
KQ+H VK GFE++ SL+DMY K G++D +F +
Sbjct: 253 ERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNR 312
Query: 230 RDVVSWTGIIVGCFECSCFTLSA------------------LVDMYSNC---NVLCEARK 268
VVSW +I G + C + A ++M + C + R+
Sbjct: 313 HSVVSWNIMIAG-YGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQ 371
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+FD + ++ WN+++SGY N + EA+ L + D T L +
Sbjct: 372 IFDCMPCPSLTS------WNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSS 425
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C L + +VH G+ D V S+LI++Y++ G ++ + +F +LP+ DVV
Sbjct: 426 CAELGFLEA--GKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVV 483
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ ++ G + + L A F+ M ++F ++V+ C+ L+SL +G+Q HA
Sbjct: 484 CWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQI 543
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
VK GF + +SLI+MY KCG+++ F MP R+ V+W +I G QNG A+
Sbjct: 544 VKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNAL 603
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ +MI S KP++IT++ VL+AC H+ LV+E IF +M +YG+ P + HY C++D
Sbjct: 604 CLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDC 663
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
L +AG F++ E ++ MP K D +W +L +C H N L AE+L P++ + Y
Sbjct: 664 LSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASY 723
Query: 629 VMLSNVYATLGMWDSLSKVR 648
V+L+N+Y++LG WD VR
Sbjct: 724 VLLANMYSSLGKWDDAHVVR 743
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 202/662 (30%), Positives = 340/662 (51%), Gaps = 43/662 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G+ + +IK G +D+F G ++ +YA ++ A K F M +N+
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNV 314
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWTT+++ + A + M + G + N + ++VL AC+ + +H
Sbjct: 315 VSWTTIISGFVQKDDSISAFHFFKEMRKVGE-KINNYTITSVLTACTEPVMIKEAVQLHS 373
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + D+ + + L++MY K G L+ ++F + + N+A+W M+S
Sbjct: 374 WIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREME-----STKNLAMWAVMISAFAQ 428
Query: 185 ----GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP--ERDVVSWT 236
G+ V F ++ G + +S++ I D L+L + + +T
Sbjct: 429 SGSTGRAVELFQRMLQEGLRPDKFCSSSVLS-------IIDSLSLGRLIHCYILKIGLFT 481
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
I VG S+L MYS C L E+ +F+Q NV+ W SMI+G+
Sbjct: 482 DISVG---------SSLFTMYSKCGSLEESYTVFEQMPD-----KDNVS-WASMITGFSE 526
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
++ E+A+ L + + D T T+AL AC L + +VHG + + +
Sbjct: 527 HDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEK--GKEVHGYALRARVGKEV 584
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+VG L+++Y++ G + A +F LP+KD + S L+ G ++G A LLF ++ +
Sbjct: 585 LVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMA 644
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ F +SSV+ + L SL G Q+HA K G E +SL+ MY KCG ID+
Sbjct: 645 DLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDEC 704
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F+ + + D++SWT +IV Q+G+ EA+ + M + KP+ +TF+GVLSAC H
Sbjct: 705 HKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHN 764
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G+VEE ++ SM EYG+EP HY CMVDLLG++G +AE+ I MP +PD +W
Sbjct: 765 GMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGI 824
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L AC+ H + +L + A++++ P + YV LSN+ A +G W+ + K+R + G
Sbjct: 825 LLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGV 884
Query: 657 KK 658
KK
Sbjct: 885 KK 886
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 154/684 (22%), Positives = 287/684 (41%), Gaps = 107/684 (15%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
R +++ K LH +K + Q + F N+L+ Y S+ A +LFD+ N++SW
Sbjct: 58 RCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNI 117
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+++ N + R + M + +PN F Y +VL AC+ G G L++ +
Sbjct: 118 LISGCNQNFSFEDSWRNFCKM-RFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKN 176
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
+ + ++D++ K S D + NV WN+++SG
Sbjct: 177 GFFSNGYVRAGMIDLFAKLCSFE----DALRVFQDVLCENVVCWNAIISGAVKNRENWVA 232
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
G+ V + +K G ++ T++ID+
Sbjct: 233 LDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDL 292
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------CSCFTL 250
Y KC ++D + F MP R+VVSWT II G + + +T+
Sbjct: 293 YAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTI 352
Query: 251 SALVDMYSNCNVLCEARKLF-----------DQYSSWAASAYGNVAL------------- 286
++++ + ++ EA +L SS + Y + +
Sbjct: 353 TSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMES 412
Query: 287 ------WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
W MIS + + A+ L + G+ D + +S L +L
Sbjct: 413 TKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSL-----SLG 467
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+H I+ G D VGS+L +Y++ G+++ + +F ++P KD V+W+ +I G ++H
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEH 527
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
A LFR+M+ +Q +++ L CS L SL +GK+VH + ++ KE +
Sbjct: 528 DHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG 587
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+L++MY KCG I +F +P++D S + ++ G QNG ++A+ F E+ + L
Sbjct: 588 GALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLW 647
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
+ T V+ A ++ T + + GL + +V + + G D+ +
Sbjct: 648 IDSFTVSSVIGAVAILNSLDIG-TQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHK 706
Query: 581 LIAEMPFKPDKTIWASMLKACETH 604
+ ++ KPD W +M+ + H
Sbjct: 707 VFEQIE-KPDLISWTAMIVSYAQH 729
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 229/540 (42%), Gaps = 101/540 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM- 64
I L C + IK+ LH I K G D + L++MY+ ++ + ++F EM
Sbjct: 352 ITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREME 411
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ KN+ W M++A+ + A+ L+ ML+ G + P+ F S+VL S+ L LG
Sbjct: 412 STKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG-LRPDKFCSSSVL---SIIDSLSLG 467
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYG---- 173
RLIH I + L D + ++L MY KCGSL + +F+Q + WA+ G
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEH 527
Query: 174 -----NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTL 204
V L+ M L GK+VH + ++ KE +
Sbjct: 528 DHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG 587
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+L++MY KCG I +F+ +P++D F+ S+LV
Sbjct: 588 GALVNMYSKCGAIVLARRVFDMLPQKDQ---------------FSCSSLV---------- 622
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
SGY N E+A+ L I + + IDS+T +S
Sbjct: 623 ---------------------------SGYAQNGYIEDALLLFHEIRMADLWIDSFTVSS 655
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
+ A + +LN + Q+H + G + VGS+L+ +Y++ G++ ++F ++ K
Sbjct: 656 VIGA-VAILN-SLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK 713
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQ 443
D+++W+ +I+ +HG + A ++ M + VL CS + G
Sbjct: 714 PDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSH 773
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+++ + G E ++D+ + G + + MP E D + W ++ C +G
Sbjct: 774 LNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHG 833
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 198/402 (49%), Gaps = 16/402 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++L+ Y N + A +LFD+ + + NV WN +ISG N E++
Sbjct: 82 FMTNSLMGWYCKSNSMVHALRLFDK------TPHPNVISWNILISGCNQNFSFEDSWRNF 135
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ SG + +T+ S L AC L + + V+ L + +G+ + V + +IDL+A
Sbjct: 136 CKMRFSGFDPNQFTYGSVLSACTAL--GSPLYGELVYSLALKNGFFSNGYVRAGMIDLFA 193
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+L + + AL +F + ++VV W+ +I G K+ N +A LF M N F SS
Sbjct: 194 KLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSS 253
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C+ L L G+ V + +K G ++ T++ID+Y KC ++D + F MP R+
Sbjct: 254 ILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRN 313
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VVSWT II G Q + A +F+EM + K N T VL+AC +++EA + +
Sbjct: 314 VVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHS 373
Query: 548 SM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ K + L+ ++ ++++ + G D +E++ EM + +WA M+ A +
Sbjct: 374 WIFKTGFYLDSNVSS--ALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGS 431
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
T + +++L P K+ S L + DSLS R
Sbjct: 432 TGRAVELFQRMLQEGLR-PDKFCSSS----VLSIIDSLSLGR 468
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + AL C S+++GK +H ++ + +++ G L++MY+ ++ A ++F
Sbjct: 548 DQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVF 607
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + +K+ S +++V+ Y N A+ L+ H + + + F S+V+ A ++ L
Sbjct: 608 DMLPQKDQFSCSSLVSGYAQNGYIEDALLLF-HEIRMADLWIDSFTVSSVIGAVAILNSL 666
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
D+G +H +T+ L + + ++L+ MY KCGS+ K+F+Q ++ W
Sbjct: 667 DIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK------PDLISWT 720
Query: 180 SMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ GK A V K G + + VT ++ G +++G + N M +
Sbjct: 721 AMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKE 780
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
GI G + +C +VD+ L EA + +
Sbjct: 781 -----YGIEPGYYHYAC-----MVDLLGRSGRLKEAERFINN 812
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 232/771 (30%), Positives = 368/771 (47%), Gaps = 129/771 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE-----M 64
L+ C ++ GK++H II G D F +L++MY L+ A ++FD +
Sbjct: 568 LKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGV 627
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL--D 122
+ +++ +M+ Y +R + + ML G V P+ F S V+ G+ +
Sbjct: 628 SARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLG-VRPDAFSLSIVVSVLCKEGNFRRE 686
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNS 180
G+ IH + R L+ D+ L L+DMY K G T ++F + + + NV LWN
Sbjct: 687 DGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKS-----NVVLWNV 741
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
M+ G G+Q+H VK G
Sbjct: 742 MIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMG 801
Query: 197 FEKEDVTLTSLIDMYLKCG----------------------------EIDDG---LALFN 225
+ + TSL+ MY KCG E D+G L LF
Sbjct: 802 LDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFG 861
Query: 226 FMPERDVV--SWT-GIIVGCFECSCFTL-----------------------SALVDMYSN 259
FM ++ V+ S+T ++ C CS F L SAL+ +YS
Sbjct: 862 FMRQKSVLPDSFTLSNVISC--CSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSK 919
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS--GMCI 317
C C+ D Y + + ++ W S+ISG N + +EA+ + + +
Sbjct: 920 CG--CDT----DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 973
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
DS TS + AC L + F LQVHG ++ +G L+ VGS+LIDLY++ G + AL+
Sbjct: 974 DSDIMTSVINACAGLEALS--FGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALK 1031
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F + +++VAW+ +I +++ L L+ LF M++ + I+SVL S AS
Sbjct: 1032 VFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTAS 1091
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +GK +H + ++ G + +LIDMY+KCG +FK M + +++W +I G
Sbjct: 1092 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 1151
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G +G + A++ F E+ ++ P+++TFL ++SAC H+G VEE F MK +YG+EP
Sbjct: 1152 YGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEP 1211
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+EHY MVDLLG+AG ++A I MP + D +IW +L A TH+N +L + AE+L
Sbjct: 1212 KMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKL 1271
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
L PE S YV L N+Y G+ + +K+ K+ G +K+ G SWIEVS
Sbjct: 1272 LRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVS 1322
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 254/559 (45%), Gaps = 35/559 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C Q + G+ +HC ++K GL D + +LLSMY+ + +A +F + K
Sbjct: 777 ALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKR 836
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W MV AY N A+ L+ M + SV P+ F S V+ CS+ G D G+ +H
Sbjct: 837 LEIWNAMVAAYVENDNGYSALELFGFMRQ-KSVLPDSFTLSNVISCCSMFGLYDYGKSVH 895
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + ++ + + LL +Y KCG T D Y + + ++ W S++SG
Sbjct: 896 AELFKRPIQSTPAIESALLTLYSKCGCDT----DAYLVFKSMEEKDMVAWGSLISGLCKN 951
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF-MPERDVVSWTGIIVGCF 243
GK A V + +D +L D+ GL +F + + TG ++
Sbjct: 952 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVL--- 1008
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F S+L+D+YS C + A K+F N+ WNSMIS Y N E +
Sbjct: 1009 --NVFVGSSLIDLYSKCGLPEMALKVFTSMRP------ENIVAWNSMISCYSRNNLPELS 1060
Query: 304 ITLLSHIHSSGMCIDSYTFTS---ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
I L + + S G+ DS + TS A+ + +LL S +HG + G D + +
Sbjct: 1061 IELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-----LHGYTLRLGIPSDTHLKN 1115
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LID+Y + G K A +F ++ K ++ W+ +I G HG A LF ++ + +
Sbjct: 1116 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETP 1175
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ S++ C+ + GK + G E + +++D+ + G +++ +
Sbjct: 1176 DDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSF 1235
Query: 480 FKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE-ITFLGVLSACRHAG 537
K MP E D W ++ + + I ++++ R++P T++ +++ AG
Sbjct: 1236 IKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLL--RMEPERGSTYVQLINLYMEAG 1293
Query: 538 LVEEAWTIFTSMKPEYGLE 556
L EA + MK E GL+
Sbjct: 1294 LKNEAAKLLGEMK-ERGLQ 1311
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 253/534 (47%), Gaps = 61/534 (11%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
F + ++LKACS +L G+ IH I YD + +L++MYVKCG L ++FD
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAF-----CVKR----GFEKEDVTLTSLIDMYLKC 214
+S SA +V + NSM+ G + F C +R G + +L+ ++ + K
Sbjct: 622 WSQSGVSAR-DVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKE 680
Query: 215 GEI--DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
G +DG + +M + + F +AL+DMY + +A ++F +
Sbjct: 681 GNFRREDGKQIHGYM-----------LRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVE 729
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ NV LWN MI G+ +E E ++ L S+ + + S +FT AL AC
Sbjct: 730 IEDKS-----NVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQ- 783
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+ NS F Q+H +V G + D V ++L+ +Y++ G V A +F + K + W+
Sbjct: 784 -SENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 842
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
++ ++ A LF M + + F +S+V+ CS GK VHA KR
Sbjct: 843 MVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRP 902
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ ++L+ +Y KCG D +FK M E+D+V+W +I G +NG+ KEA+ F
Sbjct: 903 IQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 962
Query: 513 EMI--QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH---------LEH 561
+M LKP+ V++AC AGL EA + +GL+ H L
Sbjct: 963 DMKDDDDSLKPDSDIMTSVINAC--AGL--EALS--------FGLQVHGSMIKTGQVLNV 1010
Query: 562 YY--CMVDLLGQAGCFDDAEQLIAEMPFKPDKTI-WASMLKACETHNNTKLVSI 612
+ ++DL + G + A ++ M +P+ + W SM+ +C + NN +SI
Sbjct: 1011 FVGSSLIDLYSKCGLPEMALKVFTSM--RPENIVAWNSMI-SCYSRNNLPELSI 1061
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 20/236 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ + C ++ G +H +IK G ++F G++L+ +Y+ A K+F M
Sbjct: 978 MTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMR 1037
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+NIV+W +M++ Y+ N P +I L+N ML G + P+ ++VL A S + L G+
Sbjct: 1038 PENIVAWNSMISCYSRNNLPELSIELFNLMLSQG-IFPDSVSITSVLVAISSTASLLKGK 1096
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN--WAASAYGNVALWNSMLS 183
+H R + DT L N L+DMYVKCG F +Y+ + + ++ WN M+
Sbjct: 1097 SLHGYTLRLGIPSDTHLKNALIDMYVKCG------FSKYAENIFKKMQHKSLITWNLMIY 1150
Query: 184 GGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G H C K G +DVT SLI G +++G F M +
Sbjct: 1151 GYGS-HGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQ 1205
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 11/271 (4%)
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLS-HIHSSGMCIDSYTFTSALKACINLL 333
S A +Y + A NS I + + +A+ L + H SS + +TF S LKAC +L
Sbjct: 516 SRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLT 575
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF-----HRLPKKDVV 388
N +S +HG I+ G+ D + ++L+++Y + G + A+++F + +DV
Sbjct: 576 NLSS--GKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVT 633
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR--GKQVHA 446
+ +I G K FR M+ + F +S V+ V + RR GKQ+H
Sbjct: 634 VCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHG 693
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAK 505
+ ++ + + T+LIDMY K G D +F + ++ +VV W +IVG G + +
Sbjct: 694 YMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICE 753
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
++ + + +K +F G L AC +
Sbjct: 754 SSLELYMLAKSNSVKLVSTSFTGALGACSQS 784
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 200/635 (31%), Positives = 310/635 (48%), Gaps = 85/635 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y A KLFDEM +++VSW M+ Y N+ A L+ M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
++ +L + +G +D R + +R+ E + V N LL YV+ +
Sbjct: 159 S-----WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACM 209
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
LF NWA + WN +L G + R F ++ V+ ++I Y +
Sbjct: 210 LFKSRENWA------LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G+ID+ LF+ P +DV +WT ++ G Y ++ EAR+LFD+
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSG---------------YIQNRMVEEARELFDKMP 308
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N WN+M++GYV E+ E A L + C N+
Sbjct: 309 E------RNEVSWNAMLAGYVQGERMEMAKELFD-----------------VMPCRNVST 345
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+N+ +I YA+ G + A LF ++PK+D V+W+ +I
Sbjct: 346 WNT------------------------MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++ G + A LF M +N+ SS L C+ + +L GKQ+H VK G+E
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+ MY KCG I++ LFK M +D+VSW +I G ++G + A+ +F+ M
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ LKP++ T + VLSAC H GLV++ F +M +YG+ P+ +HY CMVDLLG+AG
Sbjct: 502 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+DA L+ MPF+PD IW ++L A H NT+L A+++ A PE+ YV+LSN+
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 621
Query: 635 YATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
YA+ G W + K+R + G KK G SWIE+ +
Sbjct: 622 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 656
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 217/475 (45%), Gaps = 50/475 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+ + N +LS YA ++DA +FD M KN VSW +++AY N + A L+
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVLMNTLLDMYVKCG 154
+ V N C L G + +++ R + + D V NT++ Y + G
Sbjct: 215 ENWALVSWN----------CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSG 264
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSL 207
+ R+LFD+ S +V W +M+SG Q R E+ +V+ ++
Sbjct: 265 KIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ Y++ ++ LF+ MP R+V +W +I G Y+ C + EA+
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG---------------YAQCGKISEAK 363
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
LFD+ + W +MI+GY + + EA+ L + G ++ +F+SAL
Sbjct: 364 NLFDKMPK------RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C +++ Q+HG +V GYE VG+ L+ +Y + G+++ A +LF + KD+
Sbjct: 418 TCADVVALE--LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHA 446
V+W+ +I G ++HG +A F M + + +VL CS + +G+Q +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
G ++D+ + G ++D L K MP E D W G ++G +
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW-GTLLGASR 589
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 42/302 (13%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ T N +++ YA +++A LFD+M +++ VSW M+ Y+ + A+RL+ M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G N +S+ L C+ L+LG+ +H R+ + E + N LL MY KCGS
Sbjct: 401 EREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKR-GFEKEDVT 203
+ LF + A ++ WN+M++G + H F +KR G + +D T
Sbjct: 460 IEEANDLFKEM------AGKDIVSWNTMIAGYSR-HGFGEVALRFFESMKREGLKPDDAT 512
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ +++ G +D G F M + G++ +C +VD+ +L
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQD-----YGVMPNSQHYAC-----MVDLLGRAGLL 562
Query: 264 CEARKLFDQY------SSW-----AASAYGNVALWNSMISG-YVLNEQNEEAITLLSHIH 311
+A L + W A+ +GN L + + + +N LLS+++
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 312 SS 313
+S
Sbjct: 623 AS 624
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK LH R++K G F GN LL MY S+ +A+ LF EMA K+
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
IVSW TM+ Y+ + A+R + M G ++P+ AVL ACS +G +D GR
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPDDATMVAVLSACSHTGLVDKGR 530
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 337/662 (50%), Gaps = 21/662 (3%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G + +GK +H ++K+G QDIF N+LL MY + +A +F+ M ++ VSW
Sbjct: 50 GGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWN 109
Query: 74 TMVTAYTSNKRPNWAIRLYNHML-EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
TM++ + + ++ ++ M+ E G N A L +C+ L G IH +
Sbjct: 110 TMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLV 169
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
++ ++ D L++ L++MY+KCG + +F++ + N+A+WN M+ G V
Sbjct: 170 KKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGR-NMAVWNVMILG--YVSN 226
Query: 191 FCVKRGFE--KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSC 247
C+ E E + L D + L + + + G+I+G +
Sbjct: 227 ECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQI---HGLILGLGLDDDV 283
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+AL++MY C + ++F + S N+ +W S++ N EA+
Sbjct: 284 RVGTALMEMYFKCGDPETSLQIFKR------SQNHNLVMWGSVMLNCAQNGYPNEALEFF 337
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S D +AL+AC + L+ R + +HG + G++ D VG L+D Y
Sbjct: 338 SEFMLDCGFPDPVILLAALRAC-SFLSLKPR-GMAIHGFAIKMGFDSDVFVGGALVDFYG 395
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G+++ A ++F+ L +D+V+W+ LI G ++ A FRDM + N ++
Sbjct: 396 KCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMAC 455
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L VC+ L+ + K+VH + ++ FE + SLI Y KCG+I +F+ +P R+
Sbjct: 456 ILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRN 515
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+W I++G G +GR E A F++M ++ +KP+ TF +LS+C H+G V+ W F
Sbjct: 516 EVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFN 575
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SM +Y LEP +E Y CMVDLLG+AG + A LI MP PD IW S+L +C+ H NT
Sbjct: 576 SMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNT 635
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
KL ++A + V+L+N+Y G + + +VR K++G +K+ G SWIEV
Sbjct: 636 KLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEV 695
Query: 667 SS 668
+
Sbjct: 696 DN 697
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 157/440 (35%), Gaps = 105/440 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C Q + GK +H I+ GL D+ G L+ MY + ++F N+V W
Sbjct: 258 CSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMW 317
Query: 73 TTMVTAYTSNKRPNWAIRLYNH-MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
+++ N PN A+ ++ ML+ G +P + A L+ACS G IH
Sbjct: 318 GSVMLNCAQNGYPNEALEFFSEFMLDCGFPDP--VILLAALRACSFLSLKPRGMAIHGFA 375
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------- 184
+ + D + L+D Y KCG + + Q + S V+ WN+++SG
Sbjct: 376 IKMGFDSDVFVGGALVDFYGKCGDME---YAQQVFYGLSTRDLVS-WNALISGFAQNKCA 431
Query: 185 -------------------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
K+VH + ++ FE + SL
Sbjct: 432 DEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSL 491
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
I Y KCG+I +F +P R+ V+W I++G
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLG-------------------------- 525
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+ ++ + +E + + + D TFTS L
Sbjct: 526 --------------------------FGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLS 559
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
+C + ++ + + ++ E + ++DL R GN+ A +L +P D
Sbjct: 560 SCSHSGKVDAGWKY-FNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPD 618
Query: 387 VVAWSGLIMGCTKHGLNSLA 406
W L+ C HG LA
Sbjct: 619 DRIWGSLLASCKNHGNTKLA 638
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 18/235 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ ALR C +G ++H IK G D+F G L+ Y + A ++F ++
Sbjct: 352 LLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLS 411
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VSW +++ + NK + A++ + M + ++PN + +L C+ + L +
Sbjct: 412 TRDLVSWNALISGFAQNKCADEALKAFRDM-QSKQIKPNTVTMACILSVCTHLSVMILCK 470
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H + R E + ++ N+L+ Y KCG + +R +F++ N WNS+L
Sbjct: 471 EVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKL------PVRNEVTWNSILL 524
Query: 184 G----GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPE 229
G G+ F ++ ++ T TSL+ G++D G FN M E
Sbjct: 525 GFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMME 579
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF-IISSVLKVCSCLASLRRGKQV 444
DV + +I CT+ G A ++ D I V +F ++K L + +GKQ+
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H +K GF ++ SL+ MY KCG + + +F+ M ERD VSW +I G Q+G
Sbjct: 62 HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDY 121
Query: 505 KEAIAYFQEMIQ--SRLKPNEITFLGVLSAC 533
+++ F+ M++ N + L LS+C
Sbjct: 122 VKSLVMFRRMVKECGGSYHNRVACLAALSSC 152
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 338/677 (49%), Gaps = 41/677 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ C G S H R+I G S D + +L++ Y+ F A K+F
Sbjct: 47 DAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVF 106
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M +N+V WTTM+ YT + A +YN M G ++P S+V LSG L
Sbjct: 107 DTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQG-IQP-----SSVTMLGLLSGVL 160
Query: 122 DLGRL--IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+L L +H + + D L N++L++Y KCG ++ D + + +V WN
Sbjct: 161 ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCG----RVEDAQALFELMDARDVISWN 216
Query: 180 SMLSGGKQ------VHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
S++SG Q V ++ G E + T SL+ ++ G +
Sbjct: 217 SLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGH---- 272
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I+ E ++L+ MY C + A ++F+ + +V W +M
Sbjct: 273 -------ILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE------GMMHKDVISWTAM 319
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
ISG V N+ + A+T+ + S + + T S L AC L +F VHG I+
Sbjct: 320 ISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFP--LGTSVHGYILRQ 377
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+LD ++L+ +YA+ G+++ + +F R+ ++D+V+W+ ++ G ++G A LLF
Sbjct: 378 RIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLF 437
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+M + Q + + S+L+ C+ + +L +GK +H F K + T+L+DMY KC
Sbjct: 438 NEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKC 497
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G++ F MP++D+VSW+ II G G +G+ + A+ + + + + ++PN + +L +L
Sbjct: 498 GDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSIL 557
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC H GLV++ + F SM ++G+EP LEH C+VDLL +AG ++A M KP
Sbjct: 558 SACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPS 617
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+ +L AC T N +L I+A +++ P + YV L++ YA++ WD + +V
Sbjct: 618 MDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQ 677
Query: 651 GKKLGEKK-AGMSWIEV 666
K L KK G S+IE+
Sbjct: 678 MKSLHLKKLPGWSFIEL 694
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 251/580 (43%), Gaps = 99/580 (17%)
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
Y+ ML + P+ + +++KAC+ G H+R+ + D+ + +L++ Y
Sbjct: 36 YSSMLSTDT-PPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYS 94
Query: 152 KCG--SLTRKLFDQYSN------------WAASAYGNVA--LWNSMLSGGKQ-------- 187
K G RK+FD + + + +VA ++N M G Q
Sbjct: 95 KFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLG 154
Query: 188 -------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+HA ++ GF + S++++Y KCG ++D ALF M RDV+S
Sbjct: 155 LLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVIS 214
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W ++ G + GN+
Sbjct: 215 WNSLVSG------------------------------------YAQLGNI---------- 228
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--QVHGLIVTSGY 352
E + LL + + G+ D TF S + A S+ + VHG I+ +G
Sbjct: 229 ------REVLQLLIRMKTDGIEPDQQTFGSLVSAAA----MQSKLGVGKMVHGHILRAGL 278
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
E D + ++LI +Y + GNV SA +F + KDV++W+ +I G ++ +A +FR
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ S + I+SVL C+ L S G VH + +++ + + + SL+ MY KCG
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++ ++F M RD+VSW I+ G QNG +A+ F EM ++R +P+ IT + +L A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C G + + I + + L P + +VD+ + G A++ MP + D
Sbjct: 459 CASIGALHQGKWIHNFVT-KSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLV 516
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
W+S++ +H + + L T + P+ + LS
Sbjct: 517 SWSSIIAGYGSHGKGETALRMYSDFLHTGIQ-PNHVIYLS 555
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L + M++++ + S++K C+ L G H + G+ + TSLI+ Y
Sbjct: 34 LTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFY 93
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
K G +F M +R+VV WT +I + G A + + M + ++P+ +T L
Sbjct: 94 SKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTML 153
Query: 528 GVLSA--------CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
G+LS C HA ++ +YG + M+++ + G +DA+
Sbjct: 154 GLLSGVLELVHLQCLHACVI------------QYGFGSDVALANSMLNVYCKCGRVEDAQ 201
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
L M + D W S++ N + V
Sbjct: 202 ALFELMDAR-DVISWNSLVSGYAQLGNIREV 231
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 198/640 (30%), Positives = 320/640 (50%), Gaps = 43/640 (6%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y +L A +LF+ M +N VSWT M+ Y+ N +P A LY M G V
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSG-V 139
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK--CGSLTRK 159
+P+ ++ +L + L IH I R ++ N+L+D Y K C + +
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LF + + ++ N M++G K GF +E + L +++ +D
Sbjct: 200 LFSEMPTKDSVSF------NVMITG-------YTKYGFREEALKL------FMQMRNMDF 240
Query: 220 GLALFNF-------MPERDVVSWTGI----IVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+ F F + DV+ I I + F +AL+D YS + + A+
Sbjct: 241 QPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKN 300
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFD+ +Y N +I+GY N Q E++ L + G D F A
Sbjct: 301 LFDEMPELDGVSY------NIIITGYAWNGQYEKSFDLFKRLQ--GTSFDRKNFPFATML 352
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+ + N Q H V + + VG+ L+D+YA+ + A +F L ++ V
Sbjct: 353 SVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSV 412
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ +I + G + A +F++M N +Q +S LK + LAS+ GKQ+H+
Sbjct: 413 PWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSV 472
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
++ G + + L+DMY CG + D + +FK MP+R++V W +I QNG A+
Sbjct: 473 IRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATF 532
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ F +MI+S L P+ ++FL VL+AC H GLVE+A F SM Y L+P +HY M+D+
Sbjct: 533 SSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDV 592
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP-EDPSK 627
L ++G F++AE LI+EMPF+PD+ +W+S+L +C H N L A+QL D +
Sbjct: 593 LCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAA 652
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
YV +SN+YA G W++ +KV+KA ++ G KK SW+E+
Sbjct: 653 YVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEI 692
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 209/529 (39%), Gaps = 109/529 (20%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++K+ +H II++G S + N+L+ Y L+ A +LF EM K+ VS+ M+T
Sbjct: 158 TLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMIT 217
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
YT A++L+ M +P+GF ++A+L S D+ G+ IH +
Sbjct: 218 GYTKYGFREEALKLFMQMRNM-DFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYV 276
Query: 138 YDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVAL---WNSM----------- 181
+D + N LLD Y K L + LFD+ +Y + WN
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336
Query: 182 ------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
LS G+Q HA V E +L+DMY KC +
Sbjct: 337 QGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKF 396
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+D +F + R+ V WT II
Sbjct: 397 EDANRIFANLAYRNSVPWTAII-------------------------------------- 418
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
S YV +EEA+ + ++ + D TF S LKA NL + +
Sbjct: 419 --------------SIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVS- 463
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
Q+H ++ G GS L+D+YA G++K A+E+F +P +++V W+ LI
Sbjct: 464 -LGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAY 522
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-------KQVHAFCVK 450
+++G + F DMI S + SVL CS + + QV+ +
Sbjct: 523 SQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPR 582
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
R ++ID+ + G ++ L MP E D V W+ ++ C
Sbjct: 583 RKH------YATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSC 625
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 177/416 (42%), Gaps = 35/416 (8%)
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
V A VK GF+ E + ++ +I LF+ MP R+ S ++ G
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSG------ 86
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
Y L AR+LF+ S N W MI GY N Q +EA L
Sbjct: 87 ---------YVKSRNLFRARELFESMFS------RNEVSWTIMIGGYSQNNQPKEAFNLY 131
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + SG+ D TF + L + LQ+H I+ G+ IV ++L+D Y
Sbjct: 132 TEMCRSGVKPDHITFATLLSGFDDTTTLKE--VLQIHSHIIRFGFSASLIVFNSLVDSYC 189
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ + A +LF +P KD V+++ +I G TK+G A LF M N + + F ++
Sbjct: 190 KTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAA 249
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L + + G+Q+H +K + + +L+D Y K ID LF MPE D
Sbjct: 250 MLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELD 309
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEA 542
VS+ II G NG+ +++ F+ + + F +LS G A
Sbjct: 310 GVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHA 369
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ T+ E + L VD+ + F+DA ++ A + ++ + W +++
Sbjct: 370 QAVVTTAVSEVQVGNAL------VDMYAKCEKFEDANRIFANLAYR-NSVPWTAII 418
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ S+ GK LH +I+ GL +F+G+ L+ MYA+ S+ DA ++F
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
EM +NIV W +++AY+ N + M+E G + P+ + +VL ACS G
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESG-LYPDSVSFLSVLTACSHRG 561
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 217/711 (30%), Positives = 337/711 (47%), Gaps = 113/711 (15%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
AH LFD+ ++ S+T+++ ++ + R A RL+ ++ G +E + ++S+VLK +
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLG-MEMDCSIFSSVLKVSA 108
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGN 174
D GR +H + + D + +L+D Y+K + R +FD+ N
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER------N 162
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
V W +++SG G QVH
Sbjct: 163 VVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 222
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
VK G +K SLI++YLKCG + LF+ + VV+W +I G + + L
Sbjct: 223 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG-YAANGLDL 281
Query: 251 SALVDMYSN------------------CNVLCEAR-------------KLFDQ------- 272
AL YS C L E R +FDQ
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALM 341
Query: 273 --YSSWAA-----------SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
YS A GNV W +MISG++ N+ EEA+ L S + G+ +
Sbjct: 342 VAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNE 401
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+T++ L A + +VH +V + YE VG+ L+D Y +LG V A ++F
Sbjct: 402 FTYSVILTALPVIS------PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC-LASL 438
+ KD+VAWS ++ G + G A +F ++ N+F SS+L VC+ AS+
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASM 515
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+GKQ H F +K + ++L+ MY K G I+ +FK E+D+VSW +I G
Sbjct: 516 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGY 575
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q+G+A +A+ F+EM + ++K + +TF+GV +AC HAGLVEE F M + + P
Sbjct: 576 AQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 635
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
EH CMVDL +AG + A ++I MP TIW ++L AC H T+L + AE+++
Sbjct: 636 KEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKII 695
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
A PED + YV+LSN+YA G W +KVRK ++ +K+ G SWIEV +
Sbjct: 696 AMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 746
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 244/590 (41%), Gaps = 140/590 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC+ IK+G D+ G +L+ Y ++ D +FDEM +N+V+WTT+++ Y
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR 175
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + L+ M + G+ +PN F ++A L + G G +H + + L+
Sbjct: 176 NSLNEEVLTLFMRMQDEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 234
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N+L+++Y+KCG++ R LFD+ + +V WNSM+SG
Sbjct: 235 VSNSLINLYLKCGNVRKARILFDK------TEVKSVVTWNSMISGYAANGLDLEALGMFY 288
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+Q+H VK GF + T+L+ Y KC
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348
Query: 216 EIDDGLALFN---FMPERDVVSWTGIIVGC------------------------------ 242
+ D L LF F+ +VVSWT +I G
Sbjct: 349 AMLDALRLFKETGFLG--NVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSV 406
Query: 243 ---------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+E S +AL+D Y + EA K+F +
Sbjct: 407 ILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDN------ 460
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
++ W++M++GY + E AI + S + G+ + +TF+S L C +
Sbjct: 461 KDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQ-GK 519
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q HG + S + V S L+ +YA+ G+++SA E+F R +KD+V+W+ +I G +HG
Sbjct: 520 QFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHG 579
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL- 460
A +F++M ++ V C+ HA V+ G + DI +
Sbjct: 580 QAMKALDVFKEMKKRKVKMDSVTFIGVFAACT-----------HAGLVEEGEKYFDIMVR 628
Query: 461 -----------TSLIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVGC 498
+ ++D+Y + G+++ + + MP W I+ C
Sbjct: 629 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAAC 678
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
Query: 247 CFTLSALVDMYSNCNVLC----EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
C + L ++ N + C + +L+ ++ + S + + S++ G+ + + +E
Sbjct: 21 CIYANELGNLKPNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQE 80
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A L +I GM +D F+S LK L + F Q+H + G+ D VG++L
Sbjct: 81 ATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD--ELFGRQLHCQCIKFGFLDDVSVGTSL 138
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D Y + N K +F + +++VV W+ LI G ++ LN LF M + N
Sbjct: 139 VDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNS 198
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F ++ L V + RG QVH VK G +K SLI++YLKCG + LF
Sbjct: 199 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 258
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+ VV+W +I G NG EA+ F M + ++ +E +F ++ C
Sbjct: 259 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 168/457 (36%), Gaps = 119/457 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
++ C + ++ + LHC ++KYG D L+ Y+ ++ DA +LF E N
Sbjct: 306 IKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGN 365
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT M++ + N A+ L++ M G V PN F YS +L A + + +H
Sbjct: 366 VVSWTAMISGFLQNDGKEEAVGLFSEMKRKG-VRPNEFTYSVILTALPVISPSE----VH 420
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
++ + E + + LLD YVK G + K+F N ++ W++ML+G
Sbjct: 421 AQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDN------KDIVAWSAMLAGYA 474
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GKQ H F +K +
Sbjct: 475 QAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSL 534
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
++L+ MY K G I+ +F E+D+VSW +I G
Sbjct: 535 CVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG-------------------- 574
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
Y + Q +A+ + + + +DS T
Sbjct: 575 --------------------------------YAQHGQAMKALDVFKEMKKRKVKMDSVT 602
Query: 322 FTSALKACIN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F AC + L+ + F + V + E + S ++DLY+R G ++ A+++
Sbjct: 603 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKAMKV 658
Query: 379 FHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+P W ++ C H L L +I
Sbjct: 659 IDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKII 695
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QGK H IK L + + LL+MYA + A ++F K++VSW +M++
Sbjct: 514 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMIS 573
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y + + A+ ++ M + V+ + + V AC+ +G ++ G + + R+
Sbjct: 574 GYAQHGQAMKALDVFKEMKKR-KVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 632
Query: 138 YDTVLMNT-LLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGK-------- 186
T N+ ++D+Y + G L + K+ D N A S +W ++L+ +
Sbjct: 633 APTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGS-----TIWRTILAACRVHKKTELG 687
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++ A + ++ L +MY + G+ + + M ER+V G
Sbjct: 688 RLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPG 738
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 228/752 (30%), Positives = 355/752 (47%), Gaps = 108/752 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C R + LH ++ GL D L+ Y+ L + +F+ +
Sbjct: 8 FRSCTSLRPLTL---LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDS 64
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W ++ + + AI LYN M+ Y + + F++S+VL+AC+ G+LD+G +H
Sbjct: 65 FMWAVLIKCHVWSNFCGEAISLYNKMI-YKQIPISDFIFSSVLRACAGFGNLDVGEEVHG 123
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS-----NWA-------------- 168
RI + L+ D V+ +LL MY G L+ +K+FD + +W+
Sbjct: 124 RIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSE 183
Query: 169 -----------------------ASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
A A G + L K VH +++ E
Sbjct: 184 GLEMFRLLVSQDVELDSVTMLSIAGACGELGF----LRLAKSVHGCIIRQRIETRGPLND 239
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF---TLSALVDMY----- 257
+L+ MY +C + +F+ M R + SWT +I C+ S + L V+M
Sbjct: 240 ALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMI-SCYNRSRWFKQALQVFVEMLEFKVA 298
Query: 258 ----------SNC----------NVLCEARK------------LFDQYSSWAASAY---- 281
S+C +V C A K L + Y+ + +Y
Sbjct: 299 PNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKV 358
Query: 282 ------GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
N+ WN +IS Y +EA+ + + G DS++ +S++ AC N+
Sbjct: 359 LHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLL 418
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
Q+HG + + LD V ++LID+Y++ G+V A +F R+ K VVAW+ +I
Sbjct: 419 --WLGHQIHGYAIKR-HILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMIC 475
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G ++ G + A LF M + D+N+ + ++ CS + L +GK +H + G +K
Sbjct: 476 GFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKK 535
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ T+LIDMY KCG++ +F M ER VVSW+ +I GCG +G AI+ F EMI
Sbjct: 536 DLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMI 595
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
Q +KPN+ITF+ +LSAC H+G VEE F SMK + +EP+LEH+ CMVDLL +AG
Sbjct: 596 QREMKPNDITFMNILSACSHSGYVEEGKFYFNSMK-NFEVEPNLEHFACMVDLLSRAGDL 654
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A ++I MPF + +IW ++L C H ++ I LL +D Y +LSN+Y
Sbjct: 655 DEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIY 714
Query: 636 ATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
A G WD KVR A K +G KK G S IE+
Sbjct: 715 AEEGNWDVSRKVRSAMKGIGLKKVPGYSTIEL 746
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 184/468 (39%), Gaps = 123/468 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+ L C +++GKS+HC +K+ D G L+ YA F L+ K+ +
Sbjct: 304 IMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIG 363
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++NI+SW +++ Y S A+ ++ M G + P+ F S+ + AC+ G L LG
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQI-PDSFSLSSSISACANVGLLWLGH 422
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH + + D + N+L+DMY KCG L +FD+ + +V WNSM+
Sbjct: 423 QIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQS------KSVVAWNSMIC 475
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G GK +H + G +K
Sbjct: 476 GFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKK 535
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ T+LIDMY KCG++ +F+ M ER VVSW+ +I GC
Sbjct: 536 DLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGC----------------- 578
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
+G++ + AI+L + + M +
Sbjct: 579 -------------------GMHGDI----------------DAAISLFAEMIQREMKPND 603
Query: 320 YTFTSALKACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
TF + L AC + FNS +V L++ + ++DL +R G++
Sbjct: 604 ITFMNILSACSHSGYVEEGKFYFNSMKNFEVEP-------NLEHF--ACMVDLLSRAGDL 654
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
A + + +P + W L+ GC H + + RD+++ D
Sbjct: 655 DEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTD 702
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 209/758 (27%), Positives = 349/758 (46%), Gaps = 104/758 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C +++ G+ +H RI K G D+ L++MY SL A K+F+EM
Sbjct: 204 FISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR 263
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSWT M++ Y + A+ L+ ++ G ++PN ++++L AC+ DL G
Sbjct: 264 ERNVVSWTAMISGYVQHGDSREALALFRKLIRSG-IQPNKVSFASILGACTNPNDLGEGL 322
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H I + LE + ++ N L+ MY +CGSL R++FD + N WN+M++
Sbjct: 323 KLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSL------NRTTWNAMIA 376
Query: 184 G-------------------------------------------GKQVHAFCVKRGFEKE 200
G GK++H+ G++ +
Sbjct: 377 GYGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTD 436
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC---------FEC------ 245
T+LI MY KCG ++ +FN MPER+V+SW I C F+
Sbjct: 437 LTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRR 496
Query: 246 -----SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA-----------SAYG------- 282
T L++ ++ L R + + + W S YG
Sbjct: 497 DDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLAD 556
Query: 283 -----------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
++ WN+MI+ V + N A L S G D YTF + L+A N
Sbjct: 557 AREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVAN 616
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + ++ +HGL+ G+ D V + LI +Y++ G+++ A +F + +KDVV W+
Sbjct: 617 LEDLDA--GRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWN 674
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ A LF+ M + + S+ L C+ L ++ GK++HA +
Sbjct: 675 AMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA 734
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G E + SLI+MY +CG + +F+ M RD+ SW +I G QNG+ A+ Y+
Sbjct: 735 GMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYY 794
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+ M+++ + PN+ TF +LS+ G E+A+ S+K E+ +EP +HY MV LG+
Sbjct: 795 ELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGR 854
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL-ATSPEDPSKYVM 630
AG +AE+ I E+ + +W S+L AC H N +L E LL A + P+
Sbjct: 855 AGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQ 914
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
L ++YA G W+ +S ++ ++ G IEV+S
Sbjct: 915 LMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCTIEVNS 952
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/659 (26%), Positives = 303/659 (45%), Gaps = 43/659 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +S+ +GK +H + DI+ N L+SMY+ S+ DA+ +F M K++
Sbjct: 107 LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW M++ Y + R A L+ M G ++PN + ++L AC L+ G IH
Sbjct: 167 VSWNAMISGYALHGRDQEAADLFYQMQREG-LKPNQNTFISILSACQSPIALEFGEQIHS 225
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
RI + E D + L++MY KCGS L RK+F++ NV W +M+SG
Sbjct: 226 RIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRE------RNVVSWTAMISGYVQ 279
Query: 185 -GKQVHAFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G A ++ G + V+ S++ ++ +GL L ++ + + +
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQ--EV 337
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG +AL+ MYS C L AR++FD S N WN+MI+GY
Sbjct: 338 LVG---------NALISMYSRCGSLANARQVFDNLRSL------NRTTWNAMIAGYGEGL 382
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EEA L + G D +T+ S L C + + + ++H I ++G++ D V
Sbjct: 383 M-EEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDR--GKELHSQIASTGWQTDLTV 439
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LI +YA+ G+ + A ++F+++P+++V++W+ I C +H L A+ F+ M +
Sbjct: 440 ATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDV 499
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + ++L C+ L RG+ +H + G + +LI MY +CG + D
Sbjct: 500 NPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADARE 559
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + RD+ SW +I Q+G A F++ K ++ TF+ VL A A L
Sbjct: 560 VFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAV--ANL 617
Query: 539 VE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+ +A + + + G + ++ + + G DAE + + + K D W +M
Sbjct: 618 EDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEK-DVVCWNAM 676
Query: 598 LKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
L A + + + + L D S Y N A L + K+ K+ G
Sbjct: 677 LAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAG 735
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 250/567 (44%), Gaps = 105/567 (18%)
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ R +I+ +L V+ N Y+ L+ C L+ L G+ +H+ + + + D
Sbjct: 77 DTREGKSIKGAVQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIY 136
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----------------- 184
L N L+ MY KCGS+ D + + A +V WN+M+SG
Sbjct: 137 LNNMLISMYSKCGSIE----DANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQM 192
Query: 185 ---------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
G+Q+H+ K G+E + T+LI+MY KCG +
Sbjct: 193 QREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSL 252
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+ +FN M ER+VVSWT +I G
Sbjct: 253 ELARKVFNEMRERNVVSWTAMISG------------------------------------ 276
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
YV + + EA+ L + SG+ + +F S L AC N +
Sbjct: 277 ----------------YVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGE 320
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
L++H I +G E + +VG+ LI +Y+R G++ +A ++F L + W+ +I G
Sbjct: 321 --GLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY 378
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ GL A+ LFR M ++F +S+L +C+ A L RGK++H+ G++ +
Sbjct: 379 GE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDL 437
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
T+LI MY KCG ++ +F MPER+V+SW I C ++ KEA F++M +
Sbjct: 438 TVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRD 497
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ P+ ITF+ +L++C +E I + ++G+ + ++ + G+ G D
Sbjct: 498 DVNPDHITFITLLNSCTSPEDLERGRYIHGKIN-QWGMLSNNHVANALISMYGRCGNLAD 556
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETH 604
A ++ + + D W +M+ A H
Sbjct: 557 AREVFYRIR-RRDLGSWNAMIAANVQH 582
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 33/320 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + LR + G+ +H + K G +DI L+ MY+ SL DA +F
Sbjct: 603 DKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVF 662
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ K++V W M+ AY + R A++L+ M G V P+ YS L AC+ +
Sbjct: 663 STVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEG-VNPDSSTYSTALNACARLTAV 721
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ G+ IH ++ +E DT + N+L++MY +CG L +++F++ + ++ WN
Sbjct: 722 EHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLS------RDINSWN 775
Query: 180 SMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
++++G + + ++ T TS++ Y + GE + F+F+ E
Sbjct: 776 ALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQA---FDFL-ES 831
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
W E S + +V +L EA + ++ S+ +A+ +W S+
Sbjct: 832 IKKEWN------MEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAA-----LMWESL 880
Query: 291 ISGYVLNEQNEEAITLLSHI 310
+ ++ E A T + H+
Sbjct: 881 LVACRIHLNVELAETAVEHL 900
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/669 (29%), Positives = 337/669 (50%), Gaps = 41/669 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C G S H R+I G S D + +L++ Y+ F A K+FD M +N+
Sbjct: 55 VKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNV 114
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL--I 127
V WTTM+ YT + A +YN M G ++P S+V LSG L+L L +
Sbjct: 115 VPWTTMIGCYTRAGEHDVAFSMYNIMRRQG-IQP-----SSVTMLGLLSGVLELVHLQCL 168
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H + + D L N++L++Y KCG ++ D + + +V WNS++SG Q
Sbjct: 169 HACVIQYGFGSDVALANSMLNVYCKCG----RVEDAQALFELMDARDVISWNSLVSGYAQ 224
Query: 188 ------VHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
V ++ G E + T SL+ ++ G + I
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGH-----------I 273
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ E ++L+ MY C + A ++F+ + +V W +MISG V N+
Sbjct: 274 LRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFE------GMMHKDVISWTAMISGLVQND 327
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ A+T+ + S + + T S L AC L +F VHG I+ +LD
Sbjct: 328 CADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFP--LGTSVHGYILRQRIKLDIPS 385
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++L+ +YA+ G+++ + +F R+ ++D+V+W+ ++ G ++G A LLF +M + Q
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + S+L+ C+ + +L +GK +H F K + T+L+DMY KCG++
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQK 505
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F MP++D+VSW+ II G G +G+ + A+ + + + + ++PN + +L +LSAC H GL
Sbjct: 506 CFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGL 565
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V++ + F SM ++G+EP LEH C+VDLL +AG ++A M KP + +L
Sbjct: 566 VDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILL 625
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC T N +L I+A +++ P + YV L++ YA++ WD + +V K L KK
Sbjct: 626 DACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKK 685
Query: 659 -AGMSWIEV 666
G S+IE+
Sbjct: 686 LPGWSFIEL 694
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 253/584 (43%), Gaps = 99/584 (16%)
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
Y+ ML + P+ + +++KAC+ G H+R+ + D+ + +L++ Y
Sbjct: 36 YSSMLSTDT-PPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYS 94
Query: 152 KCG--SLTRKLFDQYSN------------WAASAYGNVA--LWNSMLSGGKQ-------- 187
K G RK+FD + + + +VA ++N M G Q
Sbjct: 95 KFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLG 154
Query: 188 -------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+HA ++ GF + S++++Y KCG ++D ALF M RDV+S
Sbjct: 155 LLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVIS 214
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W ++ G + GN+
Sbjct: 215 WNSLVSG------------------------------------YAQLGNI---------- 228
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--QVHGLIVTSGY 352
E + LL + + G+ D TF S + A S+ + VHG I+ +G
Sbjct: 229 ------REVLQLLIRMKTDGIEPDQQTFGSLVSAAA----MQSKLGVGKMVHGHILRAGL 278
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
E D + ++LI +Y + GNV SA +F + KDV++W+ +I G ++ +A +FR
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ S + I+SVL C+ L S G VH + +++ + + + SL+ MY KCG
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++ ++F M RD+VSW I+ G QNG +A+ F EM ++R +P+ IT + +L A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C G + + I + + L P + +VD+ + G A++ MP + D
Sbjct: 459 CASIGALHQGKWIHNFVT-KSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLV 516
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
W+S++ +H + + L T + P+ + LS + A
Sbjct: 517 SWSSIIAGYGSHGKGETALRMYSDFLHTGIQ-PNHVIYLSILSA 559
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L + M++++ + S++K C+ L G H + G+ + TSLI+ Y
Sbjct: 34 LTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFY 93
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
K G +F M +R+VV WT +I + G A + + M + ++P+ +T L
Sbjct: 94 SKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTML 153
Query: 528 GVLSA--------CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
G+LS C HA ++ +YG + M+++ + G +DA+
Sbjct: 154 GLLSGVLELVHLQCLHACVI------------QYGFGSDVALANSMLNVYCKCGRVEDAQ 201
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
L M + D W S++ N + V
Sbjct: 202 ALFELMDAR-DVISWNSLVSGYAQLGNIREV 231
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 215/706 (30%), Positives = 352/706 (49%), Gaps = 75/706 (10%)
Query: 1 MDLRRI-VEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAH 58
+D RR V L+ C R + + ++K G LS + N+LL MY+ + A
Sbjct: 23 VDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIAR 82
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
LFDEM +N SW TM+ Y ++ ++R ++ M E +G+ ++ V+ + +
Sbjct: 83 NLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-----PERDGYSWNVVVSGFAKA 137
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVA 176
G+L + R R+ E D V +N+LL Y+ G +LF + N++A A
Sbjct: 138 GELSVAR----RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-NFSADAITLTT 192
Query: 177 LWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+ + L GKQ+HA + G E + +SL+++Y KCG+ L + ++M E+
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD----LRMASYMLEQ- 247
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
E +LSAL+ Y+NC + E+R LFD+ S+ V LWNSMI
Sbjct: 248 ----------IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC------VILWNSMI 291
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
SGY+ N EA+ L + + + DS T + + ACI L + Q+H G
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVINACIGLGFLET--GKQMHCHACKFG 348
Query: 352 YELDYIVGSNLIDLYARLGN-------------------------------VKSALELFH 380
D +V S L+D+Y++ G+ + A +F
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
R+ K +++W+ + G +++G F M + ++ +SSV+ C+ ++SL
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+QV A G + + + +SLID+Y KCG ++ G +F M + D V W +I G
Sbjct: 469 GEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG+ EAI F++M + ++P +ITF+ VL+AC + GLVEE +F SMK ++G P E
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKE 588
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H+ CMVDLL +AG ++A L+ EMPF D ++W+S+L+ C + + AE+++
Sbjct: 589 HFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
PE+ YV LS ++AT G W+S + VRK ++ K G SW +
Sbjct: 649 EPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 218/762 (28%), Positives = 354/762 (46%), Gaps = 121/762 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L CG+RR++ QG+ LH RI K S ++ F L+ MY SL+DA K+FDEM +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM-YSAVLKACSLSGDLDLGRLI 127
+W TM+ AY SN P A+ LY +M G P G + A+LKAC+ D+ G +
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGV--PLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + + ++N L+ MY K L+ R+LFD + G+ LWNS+LS
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE-----KGDAVLWNSILSSY 259
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GK++HA +K +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 202 VTL-TSLIDMYLKCGEIDDGLALFNFMPERDV---------------------------- 232
+ + +LI MY +CG++ + M DV
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 233 -------VSWTGIIVGC---------FECSCFTL-----------SALVDMYSNCNVLCE 265
VS T II E + + + L+DMYS CN+ C
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ F + ++ W ++I+GY N+ + EA+ L + M ID S
Sbjct: 440 MGRAFLRMHD------KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+A L + ++H I+ G LD ++ + L+D+Y + N+ A +F + K
Sbjct: 494 LRASSVLKSM--LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DVV+W+ +I +G S A LFR M+ + + + +L + L++L +G+++H
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ +++GF E +++DMY CG++ A+F + + ++ +T +I G +G K
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ F +M + P+ I+FL +L AC HAGL++E M+ EY LEP EHY C+
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 730
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD+LG+A C +A + + M +P +W ++L AC +H+ ++ I A++LL P++P
Sbjct: 731 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 790
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V++SNV+A G W+ + KVR K G EK G SWIE+
Sbjct: 791 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 218/762 (28%), Positives = 354/762 (46%), Gaps = 121/762 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L CG+RR++ QG+ LH RI K S ++ F L+ MY SL+DA K+FDEM +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM-YSAVLKACSLSGDLDLGRLI 127
+W TM+ AY SN P A+ LY +M G P G + A+LKAC+ D+ G +
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGV--PLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + + ++N L+ MY K L+ R+LFD + G+ LWNS+LS
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE-----KGDAVLWNSILSSY 259
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GK++HA +K +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 202 VTL-TSLIDMYLKCGEIDDGLALFNFMPERDV---------------------------- 232
+ + +LI MY +CG++ + M DV
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 233 -------VSWTGIIVGC---------FECSCFTL-----------SALVDMYSNCNVLCE 265
VS T II E + + + L+DMYS CN+ C
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ F + ++ W ++I+GY N+ + EA+ L + M ID S
Sbjct: 440 MGRAFLRMHD------KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+A L + ++H I+ G LD ++ + L+D+Y + N+ A +F + K
Sbjct: 494 LRASSVLKSM--LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DVV+W+ +I +G S A LFR M+ + + + +L + L++L +G+++H
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ +++GF E +++DMY CG++ A+F + + ++ +T +I G +G K
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ F +M + P+ I+FL +L AC HAGL++E M+ EY LEP EHY C+
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 730
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD+LG+A C +A + + M +P +W ++L AC +H+ ++ I A++LL P++P
Sbjct: 731 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 790
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V++SNV+A G W+ + KVR K G EK G SWIE+
Sbjct: 791 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 332/662 (50%), Gaps = 41/662 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SI H +I+ +G DI L +D ++ A +F + R ++ + ++
Sbjct: 32 SISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N+ P+ ++ ++ H+ + ++PN Y+ + A S D G +IH + + +
Sbjct: 92 GFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCD 151
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAF 191
+ +L + ++ MY K + RK+FD+ + LWN+M+SG ++ V +
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPE------KDTILWNTMISGYRKNEMYVESI 205
Query: 192 CVKRGFEKEDVT---LTSLIDMYLKCGEIDD---GLALFNFMPERDVVSWTGIIVGCFEC 245
V R E T T+L+D+ E+ + G+ + + + GC+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK----------TGCYSH 255
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ L+ + +YS C + A LF ++ ++ +N+MI GY N + E +++
Sbjct: 256 D-YVLTGFISLYSKCGKIKMASTLFREFRR------PDIVAYNAMIHGYTSNGETELSLS 308
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + SG + S T S + +L+ +HG + S + V + L +
Sbjct: 309 LFKELMLSGAKLKSSTLVSLVPVSGHLM-----LIYAIHGYSLKSNFLSHTSVSTALTTV 363
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++L ++SA +LF P+K + +W+ +I G T++GL A LFR+M NS N I
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTI 423
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+ +L C+ L +L GK VH FE T+LI MY KCG I + LF FMP+
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++ V+W +I G G +G +EA+ F EM+ S + P +TFL VL AC HAGLV+E I
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM YG EP ++HY C+VD+LG+AG A Q I MP +P ++W ++L AC H
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHK 603
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWI 664
+T L ++E+L P++ +V+LSN+++ + + VR+ KK KA G + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 665 EV 666
E+
Sbjct: 664 EI 665
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 195/503 (38%), Gaps = 114/503 (22%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + G +H + I G ++ G+N++ MY F + DA K+FD M K+ + W TM+
Sbjct: 133 RDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ Y N+ +I+++ ++ + +L A + +L LG IH T+
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 137 EYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYG--------------NVALWNS 180
++ + +Y KCG + LF ++ AY +++L+
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 181 -MLSGGK--------------------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
MLSG K +H + +K F T+L +Y K EI+
Sbjct: 313 LMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIES 372
Query: 220 GLALFNFMPERDVVSWTGIIVG------------------------------CFECSCFT 249
LF+ PE+ + SW +I G C +C
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQ 432
Query: 250 L-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L +AL+ MY+ C + EAR+LFD N
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK------KNE 486
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN-----FNS 337
WN+MISGY L+ +EA+T+ S + +SG+ TF L AC L+ FNS
Sbjct: 487 VTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMG 396
+I G+E + ++D+ R G+++ AL+ +P + W L+
Sbjct: 547 --------MIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598
Query: 397 CTKHGLNSLAYLLFRDMINSNQD 419
C H +LA + + + D
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPD 621
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C Q ++ GK +H + I+ L+ MYA S+ +A +LFD M +KN
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNE 486
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIH 128
V+W TM++ Y + A+ +++ ML G + P + VL ACS +G + G + +
Sbjct: 487 VTWNTMISGYGLHGHGQEALTIFSEMLNSG-IAPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
I R E ++D+ + G L R L Q+ A ++W ++L G ++
Sbjct: 546 SMIHRYGFEPSVKHYACVVDILGRAGHLQRAL--QFIE-AMPIQPGPSVWETLL-GACRI 601
Query: 189 H 189
H
Sbjct: 602 H 602
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 314/605 (51%), Gaps = 36/605 (5%)
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M+ Y + + A+ ++ M ++ SV P + ++ +LK C + DL G+ IH +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRM-KHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-----VH 189
++ M +++MY KC R++ D Y+ + ++ WN+M+SG Q V
Sbjct: 60 GFSWNLFAMTGVVNMYAKC----RQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVA 115
Query: 190 AFCVKR----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V R G + +T+ S++ + G+A+ + ++ FE
Sbjct: 116 LMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGY-----------VLRAGFES 164
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALVDMYS C + AR +FD + V WNSMI GYV + E A+
Sbjct: 165 LVNVSTALVDMYSKCGSVSIARVIFDGMD------HRTVVSWNSMIDGYVQSGDAEGAML 218
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ + T AL AC +L + +F VH L+ + D V ++LI
Sbjct: 219 IFQKMLDEGVQPTNVTVMGALHACADLGDLERGKF---VHKLVDQLKLDSDVSVMNSLIS 275
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y++ V A ++F L K +V+W+ +I+G ++G + A F +M + N + F
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ SV+ + L+ R+ K +H ++R +K +T+L+DMY KCG I LF M
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN 395
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
R V++W +I G G +G K ++ F+EM + +KPN+ITFL LSAC H+GLVEE
Sbjct: 396 ARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC 455
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F SMK +YG+EP ++HY MVDLLG+AG + A I +MP KP T++ +ML AC+ H
Sbjct: 456 FFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIH 515
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N L A ++ +P+D +V+L+N+YAT MW ++KVR +K G +K G S
Sbjct: 516 KNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSL 575
Query: 664 IEVSS 668
+E+ +
Sbjct: 576 VEIGN 580
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 249/582 (42%), Gaps = 84/582 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG +K+GK +H +I G S ++F +++MYA +NDA+ +FD M +++
Sbjct: 37 LKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDL 96
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W TM++ Y N A+ L M E G P+ ++L A + + L +G +H
Sbjct: 97 VCWNTMISGYAQNGFAKVALMLVLRMSEEGH-RPDSITIVSILPAVADTRLLRIGMAVHG 155
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ R E + L+DMY KCGS++ R +FD + V WNSM+ G Q
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMD------HRTVVSWNSMIDGYVQ 209
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ + G + +VT+ + G+++ G + + + + S +
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+++L+ MYS C + A +F + + WN+MI GY N
Sbjct: 270 -----------MNSLISMYSKCKRVDIAADIFKNLRN------KTLVSWNAMILGYAQNG 312
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EA+ + S + DS+T S + A L R A +HGL++ + + V
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAEL--SIPRQAKWIHGLVIRRFLDKNVFV 370
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+YA+ G + +A +LF + + V+ W+ +I G HGL + LF++M
Sbjct: 371 MTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTI 430
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG---FE--KEDITLTSLIDMYLKCGEI 473
N L CS H+ V+ G FE K+D + +D Y G +
Sbjct: 431 KPNDITFLCALSACS-----------HSGLVEEGLCFFESMKKDYGIEPTMDHY---GAM 476
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
D L G+ GR +A + Q+M +KP + +L AC
Sbjct: 477 VDLL---------------------GRAGRLNQAWDFIQKM---PIKPGITVYGAMLGAC 512
Query: 534 ---RHAGLVEE-AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
++ L E+ A+ IF + G L + Y + G+
Sbjct: 513 KIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGK 554
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 164/446 (36%), Gaps = 118/446 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L R ++ G ++H +++ G + L+ MY+ S++ A +FD M
Sbjct: 134 IVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMD 193
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ +VSW +M+ Y + A+ ++ ML+ G V+P L AC+ GDL+ G+
Sbjct: 194 HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEG-VQPTNVTVMGALHACADLGDLERGK 252
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+H+ + + KL+ D +MN+L+ MY KC + +F N + WN+M+
Sbjct: 253 FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN------KTLVSWNAMIL 306
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G K +H ++R +K
Sbjct: 307 GYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDK 366
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+T+L+DMY KCG I LF+ M R V++W +I G
Sbjct: 367 NVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG------------------ 408
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
YG L + ++ L + + +
Sbjct: 409 ---------------------YGTHGL-------------GKTSVELFKEMKKGTIKPND 434
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVK 373
TF AL AC S L GL + DY + ++DL R G +
Sbjct: 435 ITFLCALSAC-------SHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLN 487
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTK 399
A + ++P K + G ++G K
Sbjct: 488 QAWDFIQKMPIKPGITVYGAMLGACK 513
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 207/650 (31%), Positives = 310/650 (47%), Gaps = 98/650 (15%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA--DFTSLNDAHKLFDEMARKNIVSWTT 74
+S + K +H +IIK GL F + L+ A F +L+ A LF+ + + N W T
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNT 102
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M+ + + P AI Y ML G VEPN + + +LK+C+ G G+ IH + +
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCG-VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKL 161
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
LE D + +L++MY + G L Y + S L
Sbjct: 162 GLESDPFVHTSLINMYAQNGEL--------------GYAELVFSKSSL------------ 195
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
++ V+ T+LI Y G +DD LF +P RD VSW +I G
Sbjct: 196 ----RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG------------- 238
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
Y + + EEA+ + +
Sbjct: 239 ---------------------------------------YAQSGRFEEALAFFQEMKRAN 259
Query: 315 MCIDSYTFTSALKAC-----INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + T + L AC + L N+ R ++ HGL G L + + LID+Y++
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNW-VRSWIEDHGL----GSNLRLV--NALIDMYSKC 312
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G++ A +LF + +KD+++W+ +I G + A LFR M SN + N S+L
Sbjct: 313 GDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDV 488
C+ L +L GK +HA+ K+ + +L TSLIDMY KCG I+ +F M + +
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
SW +I G +G A A+ F++M +P++ITF+GVLSAC HAGLVE F+S
Sbjct: 433 GSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M +Y + P L+HY CM+DLLG+AG FD+AE L+ M KPD IW S+L AC H N +
Sbjct: 493 MVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
L A+ L PE+P YV+LSN+YAT G WD ++++R G KK
Sbjct: 553 LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 179/440 (40%), Gaps = 77/440 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + ++GK +H ++K GL D F +L++MYA L A +F + + ++
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM------------------------------LEYG 99
VS+T ++T YT + A RL+ + ++
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
+V PN VL AC+ SG L+LG + I L + L+N L+DMY KCG L
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSLI 208
R LF+ ++ WN M+ G ++++ + E DVT S++
Sbjct: 319 RDLFEGICE------KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
G +D G + ++ ++ +G S +T +L+DMY+ C + A++
Sbjct: 373 PACAYLGALDLGKWIHAYIDKK--------FLGLTNTSLWT--SLIDMYAKCGNIEAAKQ 422
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F A ++ WN+MISG ++ A+ L + G D TF L A
Sbjct: 423 VF------AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRL 382
C S L G S DY + L IDL R G A L +
Sbjct: 477 C-------SHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM 529
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
K D W L+ C HG
Sbjct: 530 EMKPDGAIWGSLLGACRVHG 549
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C Q S++ G + I +GL ++ N L+ MY+ L+ A LF+ +
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+I+SW M+ Y+ A+ L+ M + +VEPN + ++L AC+ G LDLG+
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGK 385
Query: 126 LIHERITREKLEY-DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
IH I ++ L +T L +L+DMY KCG++ +++F A ++ WN+M+
Sbjct: 386 WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVF------AGMKPKSLGSWNAMI 439
Query: 183 SG----GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
SG G A + R GFE +D+T ++ G ++ G F+ M E +
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW-----AASAYGNVALWN 288
S GC L ++ L + ++ + W A +GNV L
Sbjct: 500 SPKLQHYGCM----IDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGE 555
Query: 289 SMISG-YVLNEQNEEAITLLSHIHSSG 314
+ L +N A LLS+I+++
Sbjct: 556 FAAKHLFELEPENPGAYVLLSNIYATA 582
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 213/720 (29%), Positives = 337/720 (46%), Gaps = 121/720 (16%)
Query: 52 TSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAV 111
+ L +AH LFD+ ++ S+ +++ ++ + R A RL+ ++ G +E + ++S+V
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSV 99
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAA 169
LK + D GR +H + + D + +L+D Y+K + RK+FD+
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-- 157
Query: 170 SAYGNVALWNSMLSG--------------------------------------------G 185
NV W +++SG G
Sbjct: 158 ----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV------------ 233
QVH VK G +K SLI++YLKCG + LF+ + VV
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 234 -----------------------SWTGIIVGC-----------FECSCFTLSALVDM--- 256
S+ +I C CS L D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 257 ------YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
YS C + +A +LF + GNV W +MISG++ N+ EEA+ L S +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIG-----CVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ + +T++ L A + +VH +V + YE VG+ L+D Y +LG
Sbjct: 389 KRKGVRPNEFTYSVILTALPVIS------PSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
V+ A ++F + KD+VAWS ++ G + G A +F ++ N+F SS+L
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 431 VCSCL-ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
VC+ AS+ +GKQ H F +K + ++L+ MY K G I+ +FK E+D+V
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G Q+G+A +A+ F+EM + ++K + +TF+GV +AC HAGLVEE F M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ + P EH CMVDL +AG + A ++I MP TIW ++L AC H T+L
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
+ AE+++A PED + YV+LSN+YA G W +KVRK ++ +K+ G SWIEV +
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 142/588 (24%), Positives = 245/588 (41%), Gaps = 136/588 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC+ IK+G D+ G +L+ Y ++ D K+FDEM +N+V+WTT+++ Y
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + + L+ M G+ +PN F ++A L + G G +H + + L+
Sbjct: 172 NSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N+L+++Y+KCG++ R LFD+ + +V WNSM+SG
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDK------TEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+Q+H VK GF + T+L+ Y KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 216 EIDDGLALFNFMP-ERDVVSWTGIIVGC-------------------------------- 242
+ D L LF + +VVSWT +I G
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 243 -------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+E S +AL+D Y + EA K+F +
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD------KD 458
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ W++M++GY + E AI + + G+ + +TF+S L C N + Q
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASMGQGKQF 517
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG + S + V S L+ +YA+ GN++SA E+F R +KD+V+W+ +I G +HG
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL--- 460
A +F++M ++ V C+ HA V+ G + DI +
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACT-----------HAGLVEEGEKYFDIMVRDC 626
Query: 461 ---------TSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGC 498
+ ++D+Y + G+++ + + + MP + W I+ C
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 170/451 (37%), Gaps = 107/451 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
++ C + ++ + LHC ++KYG D L+ Y+ T++ DA +LF E+ N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT M++ + N A+ L++ M G V PN F YS +L A + + +H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE----VH 416
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WAASAYG-------- 173
++ + E + + LLD YVK G + K+F + W+A G
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 174 -------------------------NV-ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
NV A N+ + GKQ H F +K + ++L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ MY K G I+ +F E+D+VSW +I G
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG-------------------------- 570
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
Y + Q +A+ + + + +D TF
Sbjct: 571 --------------------------YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 604
Query: 328 ACIN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
AC + L+ + F + V + E + S ++DLY+R G ++ A+++ +P
Sbjct: 605 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 385 K-DVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
W ++ C H L L +I
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 12/277 (4%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
FT+ + +L NF +F + +G+ Y + S L + A LF +
Sbjct: 3 FTTTIWRPPSLENFKPKFRIYANGVAQVRIYCFGTVSSSRLYN----------AHNLFDK 52
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
P +D ++ L+ G ++ G A LF ++ +++ I SSVLKV + L G
Sbjct: 53 SPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG 112
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+H C+K GF + TSL+D Y+K DG +F M ER+VV+WT +I G +N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
E + F M +PN TF L G+ + T + + GL+ +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV-VKNGLDKTIPV 231
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+++L + G A L + K T W SM+
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMI 267
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QGK H IK L + + LL+MYA ++ A ++F K++VSW +M++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y + + A+ ++ M + V+ +G + V AC+ +G ++ G + + R+
Sbjct: 570 GYAQHGQAMKALDVFKEMKKR-KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 138 YDTVLMNT-LLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
T N+ ++D+Y + G L + K+ + N A S +W ++L+ + +
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-----TIWRTILAACRVHKKTELG 683
Query: 195 R-------GFEKEDVTLTSLI-DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
R + ED L+ +MY + G+ + + M ER+V G
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPG 734
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 325/665 (48%), Gaps = 83/665 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +S+ +G+ LH II G Q L++ Y+ F L DAH + +
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 162
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W ++++Y NGF A+ +
Sbjct: 163 ILHPFPWNLLISSYVR----------------------NGFCQKALSA---------YKQ 191
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
++ + I + Y +VL CG L G
Sbjct: 192 MVKKGIRPDNFTYPSVLK--------ACGEELD-----------------------LGFG 220
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
K+VH + + +LI MY KCG++ LF+ +PERD VSW
Sbjct: 221 KEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSW---------- 270
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++++ +Y++ + EA +LF S WA N+ +WN++ GY+ + A+
Sbjct: 271 -----NSMISVYASMGMWNEAFELFG--SMWAEDIELNIIIWNTIAGGYLRTGNYKGALE 323
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
LLS + G +DS L AC ++ +++ ++H + S + V + LI +
Sbjct: 324 LLSQMRKCGSHLDSVALIIGLGACSHI--GDAKLGKEIHSFAIRSCFGEVDTVKNALITM 381
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y+R ++K A LF + K ++ W+ +I GC + A L R+M+ + N I
Sbjct: 382 YSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTI 441
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMP 484
+SVL +C+ +A+L+ GK+ H + +R K+ + L +L+DMY + G++ + +F +
Sbjct: 442 ASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLG 501
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ERD +++T +I G G G + A+ F+EM ++KP+ IT + VLSAC H+GLV +
Sbjct: 502 ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQL 561
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+F M+ YGL PHLEH+ CM DL G+AG + A+++I MP+KP +WA+++ AC H
Sbjct: 562 LFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 621
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSW 663
NT++ AE+LL PE+P YV+++N+YA G W+ L+KVR + LG +KA G +W
Sbjct: 622 RNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAW 681
Query: 664 IEVSS 668
++V +
Sbjct: 682 VDVGT 686
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 40/261 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C K GK +H I+ + N L++MY+ L A+ L
Sbjct: 335 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLL 394
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M K++++W ++++ R A L ML +G +EPN ++VL C+ +
Sbjct: 395 FQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFG-IEPNYVTIASVLPLCARVAN 453
Query: 121 LDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
L G+ H +TR + D +L+ N L+DMY + G + R++FD
Sbjct: 454 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLG------------ 501
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF----NFMPERDVV 233
E++ +T TS+I Y GE L LF NF + D +
Sbjct: 502 --------------------ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 541
Query: 234 SWTGIIVGCFECSCFTLSALV 254
+ ++ C T L+
Sbjct: 542 TMIAVLSACSHSGLVTQGQLL 562
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+++QD+ ISS+L C+ + SL G+Q+H + GFE+ I + L+ Y +
Sbjct: 93 SASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLV 152
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D + + W +I +NG ++A++ +++M++ ++P+ T+ VL AC
Sbjct: 153 DAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACG 212
Query: 535 HA---GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
G +E + + ++ L H ++ + G+ G A L ++P + D
Sbjct: 213 EELDLGFGKEVHESINASRIKWSLIVH----NALISMYGKCGKVGIARDLFDKIPER-DA 267
Query: 592 TIWASML 598
W SM+
Sbjct: 268 VSWNSMI 274
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/736 (27%), Positives = 344/736 (46%), Gaps = 86/736 (11%)
Query: 6 IVEALRHCGQRRSI-KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I + CG+ S+ ++G +H + K GL D++ +L +Y + ++ + K+F+EM
Sbjct: 176 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 235
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNH----MLEYGSVEPNGFMYSAVLKACSLS-- 118
+N+VSWT+++ Y+ P I +Y G V +G ++ +S
Sbjct: 236 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISML 295
Query: 119 ---GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG---------SLTRKLFDQYSN 166
G++D I ++++ E DT+ N++ Y + G SL R+ D+ ++
Sbjct: 296 GSMGNVDYANYIFDQMS----ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 351
Query: 167 WAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
S +V G+ +H VK GF+ +L+ MY G + +F
Sbjct: 352 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 411
Query: 227 MPERDVVSW-----------------------------------TGIIVGCFECSCFTL- 250
MP +D++SW T + CF F
Sbjct: 412 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 471
Query: 251 -------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ALV MY + E+R++ Q +V WN++I
Sbjct: 472 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR------RDVVAWNALI 525
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
GY +E ++A+ + G+ + T S L AC+ + R +H IV++G
Sbjct: 526 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER-GKPLHAYIVSAG 584
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
+E D V ++LI +YA+ G++ S+ +LF+ L ++++ W+ ++ HG L
Sbjct: 585 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 644
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M + ++QF S L + LA L G+Q+H VK GFE + + DMY KCG
Sbjct: 645 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 704
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
EI + + + R + SW +I G++G +E A F EM++ +KP +TF+ +L+
Sbjct: 705 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 764
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GLV++ + + ++GLEP +EH C++DLLG++G +AE I++MP KP+
Sbjct: 765 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 824
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA- 650
+W S+L +C+ H N AE L PED S YV+ SN++AT G W+ + VRK
Sbjct: 825 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 884
Query: 651 GKKLGEKKAGMSWIEV 666
G K +KK SW+++
Sbjct: 885 GFKNIKKKQACSWVKL 900
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 172/685 (25%), Positives = 289/685 (42%), Gaps = 114/685 (16%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+++H +K + + N L++MY F + A LFD M +N VSW TM++
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLIHERITREKLEYDT 140
+ + M + G ++P+ F+ ++++ AC SG + G +H + + L D
Sbjct: 151 VGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 141 VLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-------------- 184
+ +L +Y G S +RK+F++ + NV W S++ G
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPD------RNVVSWTSLMVGYSDKGEPEEVIDIY 263
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI- 238
G+Q+ VK G E + SLI M G +D +F+ M ERD +SW I
Sbjct: 264 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323
Query: 239 --------IVGCF-----------ECSCFTLSALVDMYSNCN------------------ 261
I F E + T+S L+ + + +
Sbjct: 324 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383
Query: 262 -VLCEARKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHI 310
V+C L Y+ S N+ WNS+++ +V + ++ +A+ LL +
Sbjct: 384 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
SSG ++ TFTSAL AC F L HGL+V SG + I+G+ L+ +Y ++G
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRIL--HGLVVVSGLFYNQIIGNALVSMYGKIG 501
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ + + ++P++DVVAW+ LI G + A F+ M N + SVL
Sbjct: 502 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 561
Query: 431 VCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C L RGK +HA+ V GFE ++ SLI MY KCG++ LF + R+++
Sbjct: 562 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT----- 544
+W ++ +G +E + +M + ++ +F LSA ++EE
Sbjct: 622 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681
Query: 545 ----------IFTSMKPEYG-----------LEP----HLEHYYCMVDLLGQAGCFDD-- 577
IF + Y L P L + ++ LG+ G F++
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741
Query: 578 -AEQLIAEMPFKPDKTIWASMLKAC 601
+ EM KP + S+L AC
Sbjct: 742 ATFHEMLEMGIKPGHVTFVSLLTAC 766
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 204/675 (30%), Positives = 327/675 (48%), Gaps = 73/675 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQD---IFTGNNLLSMYADFTSLNDAH 58
++ R LRH RS+ + K LH I GL I ++L YA + A
Sbjct: 78 NVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLAR 137
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
KLFD+++ ++ W ++ Y A+R+++ M+ G P+ + + V+KACS+
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVM 197
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVA 176
L++G LIH R + + N+LL MY+ CG L R++F+ +V
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFN------VMLKRSVV 251
Query: 177 LWNSMLSG----GKQVHAFCVKRGF-----EKEDVTLTSLIDM--YLKCGEIDDGLALFN 225
WN+M+SG G+ A V E + T+ S + YLK E++ G+ +
Sbjct: 252 SWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLK--ELELGIKVHK 309
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ + + + +ALVDMYS C + EA +F A + +V
Sbjct: 310 LVQKNHLQEKIEV-----------RNALVDMYSRCGGIDEASLVF------AETKEKDVI 352
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
W SMI+GY++N + A+ L + G+ ++ T S L AC
Sbjct: 353 TWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSAC---------------- 396
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
++L +YA+ V + ++F + KK V W+ L+ G + L
Sbjct: 397 --------------ASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELARE 442
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A LF+ M+ + N +SV+ + LA L++ +H++ V+ GF + +T LID
Sbjct: 443 AVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLID 502
Query: 466 MYLKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
MY KCG +D +F +P E+D++ W+ +I G G +G + A+ F +M+ S ++PNE
Sbjct: 503 MYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNE 562
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
ITF VL AC H GLV++ T+F M Y P HY C+VDLLG+AG D+A LI
Sbjct: 563 ITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIK 622
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
MPF+ + +IW ++L AC H N +L + AE+L PE Y++L+N+YA +G W
Sbjct: 623 SMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKD 682
Query: 644 LSKVRKAGKKLGEKK 658
VR K+G +K
Sbjct: 683 AENVRHIMSKIGLRK 697
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 209/678 (30%), Positives = 337/678 (49%), Gaps = 62/678 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C Q+ K++HC I+K G D+F N LL+ Y DA LFDEM +N
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ T+ Y I LY+ + G E N ++++ LK ++ +H
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGH-ELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I + + + + L++ Y CGS+ R +F+ ++ +W ++S
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE------GILCKDIVVWAGIVS---- 220
Query: 188 VHAFC-VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER---DVVSWTGIIVGCF 243
C V+ G+ ++ + L S + M FMP D I +G F
Sbjct: 221 ----CYVENGYFEDSLKLLSCMRMA-------------GFMPNNYTFDTALKASIGLGAF 263
Query: 244 EC----------SCFTLS-----ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ +C+ L L+ +Y+ + +A K+F++ +V W+
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK------NDVVPWS 317
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+ + N EA+ L + + + + +T +S L C + S Q+HGL+V
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA--IGKCSGLGEQLHGLVV 375
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G++LD V + LID+YA+ + +A++LF L K+ V+W+ +I+G G A+
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
+FR+ + + V + SS L C+ LAS+ G QVH +K K+ SLIDMY
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG+I ++F M DV SW +I G +G ++A+ M KPN +TFLG
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
VLS C +AGL+++ F SM ++G+EP LEHY CMV LLG++G D A +LI +P++
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
P IW +ML A NN + AE++L +P+D + YV++SN+YA W +++ +R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 649 KAGKKLGEKK-AGMSWIE 665
K+ K++G KK G+SWIE
Sbjct: 676 KSMKEMGVKKEPGLSWIE 693
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C S+ G +H IK ++ + N+L+ MYA + A +F+EM +
Sbjct: 455 ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID 514
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SW +++ Y+++ A+R+ + M + +PNG + VL CS +G +D G+
Sbjct: 515 VASWNALISGYSTHGLGRQALRILDIMKDR-DCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 129 ERITRE 134
E + R+
Sbjct: 574 ESMIRD 579
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/673 (30%), Positives = 328/673 (48%), Gaps = 72/673 (10%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
H ++K G++ N LL+ Y+ + L A ++FDE+ R++ VSW ++ A ++
Sbjct: 14 HASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A RL M G + N F + L++ +++ +G + + L +
Sbjct: 73 AHPEAWRLLRAMHAQG-LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAA 131
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
+ LLD+Y KCG + R++FD N WN++++G
Sbjct: 132 SALLDVYAKCGRVRDARQVFDGMPE------RNTVSWNALIAG----------------- 168
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCFECSCF--------- 248
Y + G++ L LF M D ++ ++ SCF
Sbjct: 169 ---------YTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKI 219
Query: 249 ----------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
L+A + YS C L ++R++FD ++ WN+M+ Y N
Sbjct: 220 VKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-----IRDLISWNAMLGAYTHNG 274
Query: 299 QNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
++EA+ + SG+ D Y+FTS + +C + + +HGL++ S E
Sbjct: 275 MDDEAMKFFVRMMQESGVHPDMYSFTSIISSC-SEHGHDDHQGRVIHGLVIKSALEGVTP 333
Query: 358 VGSNLIDLYARLGN---VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V + LI +Y R ++ A + F+ L KD V+W+ ++ G ++HGL++ A FR M
Sbjct: 334 VCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMC 393
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ N +++ S+ L+ S LA L+ GKQ+H + GF D +SLI MY K G ID
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIID 453
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D F+ + V W +I G Q+G+A+ F EM+Q + + ITF+G++++C
Sbjct: 454 DARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAGLV+E I +M+ +YG+ +EHY C VDL G+AG D A++LI MPF+PD +W
Sbjct: 514 HAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H N +L S +A L P S YV+LS++Y+ LGMW + V++ KK
Sbjct: 574 MTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKR 633
Query: 655 G-EKKAGMSWIEV 666
G K G SWIEV
Sbjct: 634 GLSKVPGWSWIEV 646
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 223/513 (43%), Gaps = 36/513 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR R G L +K GL+ ++F + LL +YA + DA ++FD M +N
Sbjct: 99 ALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERN 158
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ YT + A+ L+ M G + P+ ++++L A + +L H
Sbjct: 159 TVSWNALIAGYTESGDMASALELFLEMEREG-LAPDEATFASLLTAVEGPSCFLMHQL-H 216
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+I + ++N + Y +CGSL +R++FD + ++ WN+ML
Sbjct: 217 GKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-----IRDLISWNAMLGAYT 271
Query: 185 ----GKQVHAFCVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ F V+ G + + TS+I + G D + + +
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL--------- 322
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+I E +AL+ MY+ N C + D Y + + + WNSM++GY
Sbjct: 323 -VIKSALEGVTPVCNALIAMYTRYNENC---MMEDAYKCFNSLVLKDTVSWNSMLTGYSQ 378
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ + +A+ + S + D Y F++AL++ L + Q+HGL++ SG+ +
Sbjct: 379 HGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVL--QLGKQIHGLVIHSGFASND 436
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V S+LI +Y++ G + A + F K V W+ +I G +HG +LF +M+
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ CS + G ++ + K G +D+Y + G++D
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
L MP E D + W ++ C +G + A
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 211/716 (29%), Positives = 327/716 (45%), Gaps = 159/716 (22%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C Q+ +GK LHC I+K G D+F N LL+MY L DA KLFDEM +N
Sbjct: 44 ALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERN 103
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+S+ T++ Y + R AI L+
Sbjct: 104 TISFVTLIQGYAESVRFLEAIELF------------------------------------ 127
Query: 129 ERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
R+ RE E + + T+L + V CG L G
Sbjct: 128 VRLHREGHELNPFVFTTILKLLVSMDCGEL----------------------------GW 159
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------ 240
+HA K G E T+LID Y CG +D +F+ + +D+VSWTG++
Sbjct: 160 GIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEND 219
Query: 241 --------------------------------------------GC-----FECSCFTLS 251
GC +E +
Sbjct: 220 CFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGV 279
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
AL+D+Y+ + +AR F++ +V W+ MI+ Y ++Q++EA+ + +
Sbjct: 280 ALLDLYTKSGDIDDARXAFEEIPK------KDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ + + +TF S L+AC + N Q+H ++ G D V + L+D+YA+ G
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLN--LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 391
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+++++ LF P + DV W+ +I+G + G A LF +M+ + SS L+
Sbjct: 392 MENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 451
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ LA+L G Q+H+ VK F+K+ + +LIDMY KCG I D +F M ++D VS
Sbjct: 452 ACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVS 511
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G +G AC +AGL+++ FTSM
Sbjct: 512 WNAMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSMI 543
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++G+EP +EHY CMV LLG+ G D A +LI E+PF+P +W ++L AC HN+ +L
Sbjct: 544 QDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELG 603
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
I A+ +L P+D + +V+LSN+YAT WD+++ VRK K+ G KK G+SWIE
Sbjct: 604 RISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIE 659
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 14/303 (4%)
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
H S +S+ + +AL+ CI + SR +H I+ G LD + L+++Y +
Sbjct: 30 HVSPSEFNSHAYANALQDCIQK-DEPSR-GKGLHCEILKRGGCLDLFAWNILLNMYVKSD 87
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A +LF +P+++ +++ LI G + A LF + ++N F+ +++LK
Sbjct: 88 FLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILK 147
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+ + G +HA K G E T+LID Y CG +D +F + +D+VS
Sbjct: 148 LLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS 207
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-- 548
WTG++ +N KEA+ F +M KPN TF V AC L EA+ + S
Sbjct: 208 WTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKAC----LGLEAFDVGKSVH 263
Query: 549 ---MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+K Y L+ ++ ++DL ++G DDA E+P K D W+ M+ +
Sbjct: 264 GCALKSRYELDLYVG--VALLDLYTKSGDIDDARXAFEEIP-KKDVIPWSFMIARYAQSD 320
Query: 606 NTK 608
+K
Sbjct: 321 QSK 323
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 313/654 (47%), Gaps = 83/654 (12%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+S+ QGK LH II G Q L++ Y +F L DAH + + + + W ++
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLI 166
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
++Y N A+ Y M H+ I +K
Sbjct: 167 SSYVRNGLHGEALSAYKQM-------------------------------THKGIRPDKF 195
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
Y +VL CG F GK++HA
Sbjct: 196 TYPSVLK--------ACGEKLDIAF-----------------------GKKLHASINASC 224
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
SL+ MY K GE+ LF M ERD VSW +I G
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISG--------------- 269
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y++ + EA +LF + N+ WN++ G V + EEA+ LLSH+ S G+
Sbjct: 270 YASKGMWKEAFELFGKMRVEGIEL--NIITWNTIAGGCVQSGNFEEALELLSHMRSYGID 327
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+DS L AC ++ + ++HG + S Y+ V + LI +Y+R ++ A
Sbjct: 328 MDSVATIIGLGACSHIGAI--KLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAY 385
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF K+++ W+ ++ G T + A LFR+M+ S + N I+S+L +C+ +A
Sbjct: 386 NLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVA 445
Query: 437 SLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+L+ GK+ H + ++R GF+ + SL+DMY + G++ + LF + RD V++T +I
Sbjct: 446 NLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLI 505
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G G +EA+ F EM + +KP+ +T + VLSAC H+GLV E +F M YG+
Sbjct: 506 AGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGI 565
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P LEH+ CMVDL G+AG A+++I MP++P +WA++L AC H N ++ AE
Sbjct: 566 IPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAE 625
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
+LL PE+ YV+++N+YA G W L+KVR + LG +KA G +W++V S
Sbjct: 626 KLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGS 679
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 177/485 (36%), Gaps = 163/485 (33%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG++ I GK LH I L ++F N+L+SMYA L+ A LF+ M ++
Sbjct: 201 LKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDD 260
Query: 70 VSWTTMVTAYTSN---------------------------------KRPNW--AIRLYNH 94
VSW TM++ Y S + N+ A+ L +H
Sbjct: 261 VSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSH 320
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M YG ++ + L ACS G + LGR IH R + + N L+ MY +C
Sbjct: 321 MRSYG-IDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRC- 378
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG------------------------------ 184
+ L Y+ + ++ N+ WNSMLSG
Sbjct: 379 ---KYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIA 435
Query: 185 --------------GKQVHAFCVKR-GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
GK+ H + ++R GF+ + SL+DMY + G++ + LF+ +
Sbjct: 436 SILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISR 495
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD V++T +I G
Sbjct: 496 RDEVTYTSLIAG------------------------------------------------ 507
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
Y + + EA+ L + + D T + L AC H +VT
Sbjct: 508 ----YGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSAC-------------SHSGLVT 550
Query: 350 SGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLPKKDVVA-WSGLIMG 396
G +L ++ S ++DL+ R G + A E+ R+P + A W+ L+
Sbjct: 551 EGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGA 610
Query: 397 CTKHG 401
C HG
Sbjct: 611 CRIHG 615
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L SL +GKQ+H + GFE+ I + L+ Y + D + + + W +
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLL 165
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
I +NG EA++ +++M ++P++ T+ VL AC
Sbjct: 166 ISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKAC 204
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 313/611 (51%), Gaps = 31/611 (5%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M RKN+V+WT++++ YT N RP A+ ++ M+E G V PN F +A L AC+ G L
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG-VAPNDFACNAALVACADLGALRA 59
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
G +H R D + + L++MY +CGSL +++FD+ + +V + S+
Sbjct: 60 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS------PDVVGYTSL 113
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE---RDVVSWTGI 238
+S AFC FE L ++ LK E + P + + +
Sbjct: 114 IS------AFCRNGEFELAAEALIQMLKQGLKPNE-HTMTTILTACPRVLGQQIHGYLIK 166
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+G S ++ +AL+D YS A+ +FD NV W SM+ Y+ +
Sbjct: 167 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC------KNVVSWCSMMQLYIRDG 220
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ EEA+ + + S G+ + + + L AC ++ Q+H + D V
Sbjct: 221 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSI-----GLGRQLHCSAIKHDLITDIRV 275
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+ +Y R G V+ + +++ D+V+W+ I ++G A L M +
Sbjct: 276 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 335
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N + SSVL C+ +ASL +G Q H +K G + E T +LI+MY KCG++
Sbjct: 336 TPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 395
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F M DV SW +I G Q+G A +A+ F +M + +KP++ TFLGVL C H+G+
Sbjct: 396 AFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGM 455
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE F M +Y P HY CM+D+LG+ G FD+A ++I +MPF+PD IW ++L
Sbjct: 456 VEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 515
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
+C+ H N + + A++L+ S D + YV++SN+YA G W+ KVR+ + G KK
Sbjct: 516 ASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKK 575
Query: 659 -AGMSWIEVSS 668
AG SWIE+++
Sbjct: 576 DAGCSWIEINN 586
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 222/505 (43%), Gaps = 48/505 (9%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ G+ +H ++ G + D + G+ L+ MY+ SL A ++FD M +
Sbjct: 47 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 106
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V +T++++A+ N A ML+ G ++PN + +L AC LG+ IH
Sbjct: 107 VVGYTSLISAFCRNGEFELAAEALIQMLKQG-LKPNEHTMTTILTACPRV----LGQQIH 161
Query: 129 ERITRE-KLEYDTVLMNT-LLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSM--- 181
+ ++ L +V +T L+D Y + G L + +FD NV W SM
Sbjct: 162 GYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLH------CKNVVSWCSMMQL 215
Query: 182 ------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
L QV + G + + L+ ++ CG I G L + D++
Sbjct: 216 YIRDGRLEEALQVFGDMISEGVDPNEFALSIVLG---ACGSIGLGRQLHCSAIKHDLI-- 270
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T I V +AL+ MY ++ E + ++ + ++ W + IS
Sbjct: 271 TDIRVS---------NALLSMYGRTGLVEELEAMLNKIEN------PDLVSWTTAISANF 315
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N E+AI LL +HS G + Y F+S L +C ++ + + +Q H L + G + +
Sbjct: 316 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ--GMQFHCLALKLGCDSE 373
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
G+ LI++Y++ G + SA F + DV +W+ LI G +HG + A +F M +
Sbjct: 374 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 433
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEID 474
+ + VL C+ + G+ + + F +IDM + G D
Sbjct: 434 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFD 493
Query: 475 DGLALFKFMP-ERDVVSWTGIIVGC 498
+ L + MP E D + W ++ C
Sbjct: 494 EALRMINDMPFEPDALIWKTLLASC 518
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 204/751 (27%), Positives = 344/751 (45%), Gaps = 113/751 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + + GKS+H ++K G S D F L+SMYA +L A LFD A KN+V W
Sbjct: 266 CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 325
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M++AY N++ + A +++ ML+ +++PN + +++ C S + G+ +H +
Sbjct: 326 NSMISAYAQNQKSSEAFKMFQQMLK-ANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVM 384
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS---------NWAASAYGNVALWNSMLS 183
+ +L+ + LL MY K G L F Y N S YG+ LW + +
Sbjct: 385 KYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMD 444
Query: 184 G-------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
GK HAF ++ F+ +L+ Y
Sbjct: 445 AFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYS 504
Query: 213 KCGEIDDGLALFNFMPERDVVSWT-----------------------------------G 237
CG++ LF MP R+ +SW
Sbjct: 505 DCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLIS 564
Query: 238 IIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
II C F C ++AL+ MY NC + + LF+
Sbjct: 565 IIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFE------ 618
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ ++ WN++I+GY + E + + G + T + L +C LL S
Sbjct: 619 VMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQGKS 678
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL--IM 395
+H V +G ++ + ++LI +YAR N+ S + LF K+D+ W+ + +
Sbjct: 679 -----IHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVY 733
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
TK+ S+ + F +++++ + + S++ C L+SL V A+ +++GF+K
Sbjct: 734 VQTKNAKESVTF--FCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDK 791
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ +LID++ +CG I +F+ + +D VSW+ +I G G +G ++ A+A +M
Sbjct: 792 HIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMR 851
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
S +KP+ IT+ VLSAC H G +++ W IF SM E G+ +EHY CMVDLLG+ G
Sbjct: 852 LSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQL 910
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
++A + ++P KP ++ S+L AC H N KL I+ L P++ YVML N+Y
Sbjct: 911 NEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIY 970
Query: 636 ATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
A G W ++VR ++ +K G S +E
Sbjct: 971 AAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1001
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 216/446 (48%), Gaps = 40/446 (8%)
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLF 161
+ F + V+KAC+ G + + +H + R E + V+ L+D Y K G + R +
Sbjct: 154 DDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVL 213
Query: 162 DQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GFEKEDVTLTSLIDMYL 212
D+ S ++ WN+++SG G F V R G + T S+I +
Sbjct: 214 DKISQ------PDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCT 267
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+ +D G ++ F ++ F F AL+ MY+ L AR LFD
Sbjct: 268 RMKCLDIGKSIHGF-----------VVKSGFSSDEFLTPALISMYAGGGNLFIARDLFD- 315
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
++A NV +WNSMIS Y N+++ EA + + + M + TF S + C N
Sbjct: 316 -----SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENS 370
Query: 333 LNFNSRFALQVHGLIVTSGYELD--YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
NF +L H + Y LD V + L+ +YA+LG++ SA +F+++P++++++W
Sbjct: 371 ANFWYGKSLHAHVM----KYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSW 426
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G +GL + F DM D + I ++L CS L ++ GK HAF +
Sbjct: 427 NSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFR 486
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ F+ +L+ Y CG++ LF+ MP R+ +SW +I GC NG K+A+A
Sbjct: 487 KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 546
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHA 536
+M Q +++ + +T + ++ CR A
Sbjct: 547 LHKMQQEKMELDLVTLISIIPICRVA 572
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 232/515 (45%), Gaps = 39/515 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D IV L C + +I GK+ H + ++ N LL+ Y+D L+ + KLF
Sbjct: 457 DAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLF 516
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M +N +SW T+++ N A+ L H ++ +E + +++ C ++ +L
Sbjct: 517 QKMPLRNAISWNTLISGCVHNGDTKKAVALL-HKMQQEKMELDLVTLISIIPICRVAENL 575
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNS 180
G +H + D L+N L+ MY CG + K + W + + WN+
Sbjct: 576 IQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRS-----IVSWNA 630
Query: 181 MLSG-------GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+++G + + +FC ++ G + VTL +L+ C + G ++ F
Sbjct: 631 LITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLP---SCRTLLQGKSIHAFAVRTG 687
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
V+ T II ++L+ MY+ + LF+ ++ALWN+++
Sbjct: 688 VIVETPII-----------TSLISMYARFENINSFIFLFEM------GGKEDIALWNAIM 730
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S YV + +E++T + + + D TF S + AC+ L + N + V ++ G
Sbjct: 731 SVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLN--LSNSVMAYVIQKG 788
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
++ ++ + LIDL+AR GN+ A ++F L KD V+WS +I G HG + A L
Sbjct: 789 FDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLS 848
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M S + +SVL CS + +G + V+ G + ++D+ + G
Sbjct: 849 QMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTG 908
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVG-CGQNGRAK 505
++++ + +P + VS ++G C +G K
Sbjct: 909 QLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVK 943
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 184/395 (46%), Gaps = 21/395 (5%)
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+TS + ++ C I++ L + + RD++ +V F SCF L A
Sbjct: 57 VTSFLRLFDLCRNIENLKPLGSVLIVRDLMR-DEYVVAEFIISCFHLGA----------- 104
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+L S++ A +V L N MI + E+ + + G D +TF
Sbjct: 105 ---PEL--ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFP 159
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+KAC L A VH +++ + +E + ++ + L+D YA+ G + A + ++
Sbjct: 160 FVIKACTALGAV--WIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKIS 217
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ D+V W+ LI G + +G + + + R + N +S++ +C+ + L GK
Sbjct: 218 QPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKS 277
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H F VK GF ++ +LI MY G + LF E++VV W +I QN +
Sbjct: 278 IHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQK 337
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
+ EA FQ+M+++ ++PN +TF+ ++ C ++ ++ + +Y L+ L
Sbjct: 338 SSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVM-KYRLDSQLSVAT 396
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ + + G + A+ + +MP + + W SM+
Sbjct: 397 ALLSMYAKLGDLNSADFIFYQMP-RRNLLSWNSMI 430
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 172/453 (37%), Gaps = 121/453 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL ++ + C ++ QG +LH IK G + D+ N L+SMY + +N L
Sbjct: 557 LDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFL 616
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M ++IVSW ++T Y + N + + M+ G +PN +L +C
Sbjct: 617 FEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQ-KPNYVTLLNLLPSCR---T 672
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L G+ IH R + +T ++ +L+ MY + ++ +F + ++ALWN+
Sbjct: 673 LLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL----FEMGGKEDIALWNA 728
Query: 181 MLSGGKQ--------------------------------------------VHAFCVKRG 196
++S Q V A+ +++G
Sbjct: 729 IMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKG 788
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F+K V +LID++ +CG I +F + +D VSW+ +I G
Sbjct: 789 FDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING--------------- 833
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y L+ +E A+ LLS + SGM
Sbjct: 834 -------------------------------------YGLHGDSEAALALLSQMRLSGMK 856
Query: 317 IDSYTFTSALKACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
D T+ S L AC + + FNS +V G + ++DL R
Sbjct: 857 PDGITYASVLSACSHGGFIDQGWMIFNS---------MVEEGVPRRMEHYACMVDLLGRT 907
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
G + A + +LP K V L+ C HG
Sbjct: 908 GQLNEAYDFVEKLPCKPSVSLLESLLGACIIHG 940
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 21/282 (7%)
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS- 404
LIV +Y+V +I + LG + AL F + K V + +I HGL
Sbjct: 80 LIVRDLMRDEYVVAEFIISCF-HLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFED 138
Query: 405 --LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
YL R + + D F V+K C+ L ++ + VH ++ FE+ + T+
Sbjct: 139 VLCVYLKCRVLGCPSDD---FTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTA 195
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+D Y K G + + + + D+V+W +I G NG KE +++ + LKPN
Sbjct: 196 LVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPN 255
Query: 523 EITFLGVLSACRHAGLVE-----EAWTIFTSMKPEYGLEPHLEHYYC-MVDLLGQAGCFD 576
TF ++ C ++ + + + + L P L Y +L FD
Sbjct: 256 VSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFD 315
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
A + + IW SM+ A + + + +Q+L
Sbjct: 316 SAAE--------KNVVIWNSMISAYAQNQKSSEAFKMFQQML 349
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 344/677 (50%), Gaps = 44/677 (6%)
Query: 12 HCGQRRSIKQGKSLHCR-----IIKYGLSQDIFTGNNLLSMYADFTSLND------AHKL 60
H R I G + CR I+ +++ ++ +N+L + ++ L A +
Sbjct: 20 HYISNRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYM 79
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD+M ++ +SWTT++ Y + A+ L+++M + + + FM S LKAC+L +
Sbjct: 80 FDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVN 139
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALW 178
+ G L+H + L + + + L+DMY+K G + + ++F++ NV W
Sbjct: 140 ICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMT------RNVVSW 193
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL-KCGEIDDGLALF------NFMPERD 231
++++G VHA G+ E + S +M+ K G A+ + +
Sbjct: 194 TAIIAG--LVHA-----GYNMEGLLYFS--EMWRSKVGYDSHTFAIALKASADSSLLHHG 244
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
T I F+ S F ++ L MY+ C +LF++ +V W ++I
Sbjct: 245 KAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMR------MPDVVSWTTLI 298
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S YV + E A+ + S + + YTF + + +C NL +++ Q+HG ++ G
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAA--AKWGEQIHGHVLRLG 356
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
V +++I LY++ G +KSA +FH + +KD+++WS +I ++ G A+
Sbjct: 357 LVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLS 416
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M N+F +SSVL VC +A L +GKQVHA + G + E + +++I MY KCG
Sbjct: 417 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCG 476
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+ + +F M D++SWT +I G ++G ++EAI F+++ LKP+ + F+GVL+
Sbjct: 477 SVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLT 536
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC HAG+V+ + F M Y + P EHY C++DLL +AG +AE +I MPF D
Sbjct: 537 ACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDD 596
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+W+++L+AC H + AEQLL P ++ L+N+YA G W + +RK
Sbjct: 597 VVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLM 656
Query: 652 KKLGE-KKAGMSWIEVS 667
K G K+ G SW+ V+
Sbjct: 657 KSKGVIKERGWSWVNVN 673
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 172/436 (39%), Gaps = 99/436 (22%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ + GK++H + IK G + F N L +MY + +LF++M +
Sbjct: 231 ALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPD 290
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTT+++ Y A+ + M + V PN + ++AV+ +C+ G IH
Sbjct: 291 VVSWTTLISTYVQMGEEEHAVEAFKRMRK-SYVSPNKYTFAAVISSCANLAAAKWGEQIH 349
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG----------SLTRK----------LFDQ----- 163
+ R L + N+++ +Y KCG +TRK ++ Q
Sbjct: 350 GHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAK 409
Query: 164 ----YSNW-----------AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
Y +W A S+ +V ++L GKQVHA + G + E + +++I
Sbjct: 410 EAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAII 469
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
MY KCG + + +FN M D++SWT +I G E
Sbjct: 470 SMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAE------------------------ 505
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
GY ++EAI L I S G+ D F L A
Sbjct: 506 -----------------------HGY-----SQEAINLFEKISSVGLKPDYVMFIGVLTA 537
Query: 329 C--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KK 385
C +++ + + + + S + Y LIDL R G + A + +P
Sbjct: 538 CNHAGMVDLGFYYFMLMTNVYRISPSKEHY---GCLIDLLCRAGRLSEAEHIIRSMPFHT 594
Query: 386 DVVAWSGLIMGCTKHG 401
D V WS L+ C HG
Sbjct: 595 DDVVWSTLLRACRVHG 610
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/609 (21%), Positives = 233/609 (38%), Gaps = 144/609 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C +I G+ LH +K GL +F + L+ MY + ++F++M +N
Sbjct: 130 ALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRN 189
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++ + N LY + V + ++ LKA + S L G+ IH
Sbjct: 190 VVSWTAIIAGLV-HAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ ++ + + ++NTL MY KCG +LF++ +V W +++S
Sbjct: 249 TQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMR------MPDVVSWTTLISTYV 302
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+Q+H ++ G
Sbjct: 303 QMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
S+I +Y KCG + +F+ + +D++SW+ II +YS
Sbjct: 363 VANSIITLYSKCGLLKSASLVFHGITRKDIISWSTII---------------SVYSQ--- 404
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
GY +EA LS + G + +
Sbjct: 405 -----------------------------GGYA-----KEAFDYLSWMRREGPKPNEFAL 430
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+S L C ++ QVH ++ G + + +V S +I +Y++ G+V+ A ++F+ +
Sbjct: 431 SSVLSVCGSMALLEQ--GKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGM 488
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
D+++W+ +I G +HG + A LF + + + + VL C+
Sbjct: 489 KINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN--------- 539
Query: 443 QVHAFCVKRGF--------------EKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERD 487
HA V GF KE LID+ + G + + + + MP D
Sbjct: 540 --HAGMVDLGFYYFMLMTNVYRISPSKEH--YGCLIDLLCRAGRLSEAEHIIRSMPFHTD 595
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN----EITFLGVLSACRHAGLVEEAW 543
V W+ ++ C +G ++++Q L PN IT + +A G +EA
Sbjct: 596 DVVWSTLLRACRVHGDVDRGRWTAEQLLQ--LDPNSAGTHITLANIYAA---KGRWKEAA 650
Query: 544 TIFTSMKPE 552
I MK +
Sbjct: 651 HIRKLMKSK 659
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 333/648 (51%), Gaps = 47/648 (7%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++IF+ N ++ Y +L++A LFD M ++ V+WT ++ Y N + A L+ M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM--NTLLDMYVKC 153
+G ++P+ + +L + ++ R +H + KL YD+ L+ N+LLD Y K
Sbjct: 190 GRHG-IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVI--KLGYDSTLVVSNSLLDSYCKT 246
Query: 154 GSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
SL +LF+ + + N++L+G K GF +E I+++
Sbjct: 247 RSLGLAFQLFNDIPERDSVTF------NALLTGYS-------KEGFNRE------AINLF 287
Query: 212 LKCGEIDDGLALFNFMP------ERDVVSWT----GIIVGC-FECSCFTLSALVDMYSNC 260
K E+ F F + D + + G +V C F + F +AL+D YS
Sbjct: 288 FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKH 347
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ + EA KLF + +Y N +++ Y N + +E++ L + +G ++
Sbjct: 348 DRVVEASKLFYEMPEVDGISY------NVLVTCYAWNGRVKESLELFKELQFTGFDRRNF 401
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
F + L I ++ N Q+H + + + +VG++L+D+YA+ G A +F
Sbjct: 402 PFATLLS--IAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFS 459
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
L + V W+ +I + GL+ LF +M + + +S+++ C+ LASL
Sbjct: 460 DLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTL 519
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GKQ+H+ + G+ + ++L+DMY KCG I D L +F+ MP R+ VSW +I Q
Sbjct: 520 GKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQ 579
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG + F+EM++S L+P+ ++ L +L AC H GLVEE F SM Y L P E
Sbjct: 580 NGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKE 639
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY +D+L + G FD+AE+L+A+MPF+PD+ +W+S+L +C H N +L A QL
Sbjct: 640 HYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNM 699
Query: 621 SP-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
D + YV +SN+YA G WD++ KV+KA ++ G KK SW+E+
Sbjct: 700 KVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEI 747
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 228/491 (46%), Gaps = 31/491 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ + + +H +IK G + N+LL Y SL A +LF+++ ++ V++ ++T
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+ AI L+ M E G P F ++A+L A D++ G+ +H + +
Sbjct: 273 GYSKEGFNREAINLFFKMQEVG-YRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV 331
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVAL----WNSMLSGGKQVHAF 191
++ + N LLD Y K + KLF + +Y NV + WN + ++
Sbjct: 332 WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY-NVLVTCYAWNGRVKESLELFKE 390
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
GF++ + +L+ + +D G + + D +S I+VG +
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAIS--EILVG---------N 439
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+LVDMY+ C EA ++F A + W +MIS YV +E+ + L +
Sbjct: 440 SLVDMYAKCGEFGEANRIFSDL------AIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ + D+ T+ S ++AC +L + Q+H I+ SGY + GS L+D+YA+ G+
Sbjct: 494 RAKIGADAATYASIVRACASLASLT--LGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+K AL++F +P ++ V+W+ LI ++G LF +M+ S + + S+L
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611
Query: 432 CSCLASLRRGKQVHAFCVK--RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDV 488
CS + G Q + + K++ S IDM + G D+ L MP E D
Sbjct: 612 CSHCGLVEEGLQYFDSMTRIYKLVPKKE-HYASTIDMLCRGGRFDEAEKLMAQMPFEPDE 670
Query: 489 VSWTGIIVGCG 499
+ W+ ++ CG
Sbjct: 671 IMWSSVLNSCG 681
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 179/419 (42%), Gaps = 35/419 (8%)
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
V A +K GF L+ +L+ G+++ LF+ MP +++ S +I+G
Sbjct: 87 HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMG----- 141
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
Y L EAR LFD A W +I GY N Q EA L
Sbjct: 142 ----------YIKSGNLSEARTLFDSMFQRTA------VTWTMLIGGYAQNNQFREAFGL 185
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ G+ D + + L + N QVH ++ GY+ +V ++L+D Y
Sbjct: 186 FIEMGRHGIDPDHVSLATLLSGFTEFDSVNE--VRQVHSHVIKLGYDSTLVVSNSLLDSY 243
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ ++ A +LF+ +P++D V ++ L+ G +K G N A LF M +F +
Sbjct: 244 CKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFA 303
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
++L L + G+QVH F VK F +L+D Y K + + LF MPE
Sbjct: 304 AILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEV 363
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-----GLVEE 541
D +S+ ++ NGR KE++ F+E+ + F +LS + G
Sbjct: 364 DGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIH 423
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ TI T E + L VD+ + G F +A ++ +++ + W +M+ +
Sbjct: 424 SQTIVTDAISEILVGNSL------VDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISS 475
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 176/440 (40%), Gaps = 109/440 (24%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
Q I+ G+ +H ++K ++F N LL Y+ + +A KLF EM + +S+
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+VT Y N R ++ L+ L++ + F ++ +L ++S +LD+GR IH +
Sbjct: 371 LVTCYAWNGRVKESLELFKE-LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY------------- 172
+ ++ N+L+DMY KCG ++F + W A S+Y
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489
Query: 173 ---------GNVALWNSM---------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
+ A + S+ L+ GKQ+H+ + G+ + ++L+DMY KC
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G I D L +F MP R+ VSW +I
Sbjct: 550 GSIKDALQMFQEMPVRNSVSWNALI----------------------------------- 574
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--- 331
S Y N + + L + SG+ DS + S L AC +
Sbjct: 575 -----------------SAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGL 617
Query: 332 ----LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
L F+S +++ L+ + ++ ID+ R G A +L ++P + D
Sbjct: 618 VEEGLQYFDS--MTRIYKLVPKKEHY------ASTIDMLCRGGRFDEAEKLMAQMPFEPD 669
Query: 387 VVAWSGLIMGCTKHGLNSLA 406
+ WS ++ C H LA
Sbjct: 670 EIMWSSVLNSCGIHKNQELA 689
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R C S+ GK LH II G ++F+G+ L+ MYA S+ DA ++F EM +N
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++AY N + +RL+ M+ G ++P+ ++L ACS G ++ G +
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSG-LQPDSVSLLSILCACSHCGLVEEGLQYFD 626
Query: 130 RITR 133
+TR
Sbjct: 627 SMTR 630
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 424 IISSVLKVCS-----CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++++++K C+ L + + V A +K GF L+ +L+ G+++
Sbjct: 63 LMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARK 122
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF MP +++ S +I+G ++G EA F M Q +T+ ++
Sbjct: 123 LFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQR----TAVTWTMLIGGYAQNNQ 178
Query: 539 VEEAWTIFTSMKPEYGLEP 557
EA+ +F M +G++P
Sbjct: 179 FREAFGLFIEMG-RHGIDP 196
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 353/691 (51%), Gaps = 95/691 (13%)
Query: 19 IKQGKSLHCRIIKYG--LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM--ARKNIVSWTT 74
I G++L +++ G L D N+LL++Y+ +++ A +FD M +++VSWT
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC------SLSGDLDLGRLIH 128
M + + N A+RL+ LE G + PN F A +AC L+G LG +
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLL-PNAFTLCAATQACFASELFHLAGGAVLGLVF- 180
Query: 129 ERITREKLEY---DTVLMNTLLDMYVKCGSLT--RKLFDQY------------SNWAASA 171
KL + D + L+DM+ K G L R++FD + +A S
Sbjct: 181 ------KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSG 234
Query: 172 YGN--VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
Y + V L+ ML + GF+ + TL+S++ + G G L +
Sbjct: 235 YSDEAVELFLDML-----------ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSL--- 280
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYS---NCNVLCEARKLFDQYSSWAASAYGNVAL 286
+ +G SC + LVDMY+ N L AR++F++ NV
Sbjct: 281 -------ALRLGLESDSCVS-CGLVDMYAKSHNGQSLHNAREVFNRMPKH------NVMA 326
Query: 287 WNSMISGYVL-NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
W +++SGYV Q+ + + L + + G+ + T++S LKAC NL + +S Q+H
Sbjct: 327 WTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDS--GRQIHT 384
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
V S +VG+ L+ +YA G+++ A F +L +K++V++SG + G +
Sbjct: 385 HCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRS----- 439
Query: 406 AYLLFRDMINSNQD---------VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
N+ QD ++ F S++ + + L +G+++HA +K GF +
Sbjct: 440 ---------NTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSD 490
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
SL+ MY +CG + D +F M + +V+SWT +I G ++G A A+ F +MI
Sbjct: 491 RAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIA 550
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+ +KPN++T++ VLSAC HAGLV+E F M+ +GL P +EHY CMVDLLG++G +
Sbjct: 551 AGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVE 610
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
DA I EMP + D +W ++L AC+THNN + I A ++ P+DP+ YV+LSN+YA
Sbjct: 611 DALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYA 670
Query: 637 TLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
G+WD ++++R + K K+ G+SW+ V
Sbjct: 671 EAGLWDQVARIRSLMRDKNLMKEKGLSWMHV 701
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 330/648 (50%), Gaps = 46/648 (7%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
+++ F+ + ++S Y +L A ++FD+ + +V+WTTM+ AY+ + R A +L+
Sbjct: 71 NRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAE 130
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI---HERITREKLEYDTVLMNTLLDMYV 151
M GS +P+ Y +L C+ DL++ + + H +I + + + NTLLD Y
Sbjct: 131 MHRSGS-QPDYVTYITLLTGCN---DLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYF 186
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKE 200
K G L R+LF + W + ++ N M++G + + F + GF+
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSF------NVMITGYANNGLNEEAIELFVEMQNLGFKPS 240
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
D T ++I + + G + F ++ F + F +A +D YS
Sbjct: 241 DFTFAAVISASVGLDDTAFGQQIHGF-----------VVKTSFIRNVFVGNAFLDFYSKH 289
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ + E RKLF++ +Y N +I+ Y + +E+I L + + ++
Sbjct: 290 DCVNEVRKLFNEMPELDGVSY------NVIITAYAWVGKVKESIDLFQELQFTTFDRKNF 343
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
F + L + L+ + Q+H +V S + D+ V ++L+D+YA+ G + A +F
Sbjct: 344 PFPTMLSIAASSLDL--QMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFL 401
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
RL + V W+ +I + GL+ LF +M +N +Q + VLK + LAS+
Sbjct: 402 RLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILL 461
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GKQ+H+ ++ GF + +L+DMY C I D + F+ M ER+VV+W ++ Q
Sbjct: 462 GKQLHSCVIRSGFMNV-YSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQ 520
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG K + F+EMI S +P+ ++FL +L+AC H LVEE F M Y L P E
Sbjct: 521 NGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKRE 580
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY MVD L ++G FD+AE+L+ +MPF+PD+ +W S+L +C H N L A QL
Sbjct: 581 HYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNM 640
Query: 621 SP-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
D + YV +SN++A G WDS+ KV+KA + G +K SW+E+
Sbjct: 641 KVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEI 688
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 178/418 (42%), Gaps = 35/418 (8%)
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+ A VK GF+ +I + G++ L + MP R+
Sbjct: 30 IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRN---------------S 74
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F++ ++ Y L AR++FD V W +MI Y + + +A L
Sbjct: 75 FSIDIIISGYVKSGNLTVARRIFDDTDERT------VVAWTTMIGAYSKSNRFGDAFKLF 128
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ +H SG D T+ + L C +L + Q H IV G+ L++ V + L+D Y
Sbjct: 129 AEMHRSGSQPDYVTYITLLTGCNDLEVAKELY--QAHAQIVKLGHHLNHRVCNTLLDSYF 186
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G + SA LF + D V+++ +I G +GLN A LF +M N + F ++
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ L G+Q+H F VK F + + +D Y K +++ LF MPE D
Sbjct: 247 VISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELD 306
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-----GLVEEA 542
VS+ II G+ KE+I FQE+ + F +LS + G A
Sbjct: 307 GVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHA 366
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + P++ + L VD+ + G F++A+++ + + W +M+ A
Sbjct: 367 QVVVSMADPDFRVSNSL------VDMYAKCGKFEEADRIFLRLSSR-STVPWTAMISA 417
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 186/494 (37%), Gaps = 107/494 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C K+ H +I+K G + N LL Y L+ A +LF EM +
Sbjct: 147 LTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDS 206
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ M+T Y +N AI L+ M G +P+ F ++AV+ A D G+ IH
Sbjct: 207 VSFNVMITGYANNGLNEEAIELFVEMQNLG-FKPSDFTFAAVISASVGLDDTAFGQQIHG 265
Query: 130 RITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSN--------------WAASAYG 173
+ + + + N LD Y K C + RKLF++ W
Sbjct: 266 FVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKE 325
Query: 174 NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
++ L+ + L G+Q+HA V + + SL+D
Sbjct: 326 SIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVD 385
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIV---------------------------GC 242
MY KCG+ ++ +F + R V WT +I
Sbjct: 386 MYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQAT 445
Query: 243 FEC------------------SCFTLS---------ALVDMYSNCNVLCEARKLFDQYSS 275
F C SC S AL+DMY+NC + +A K F++ S
Sbjct: 446 FACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMSE 505
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LL 333
NV WN+++S Y N + + + SG DS +F L AC + L+
Sbjct: 506 ------RNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLV 559
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
++ + G+ + Y + ++D R G A +L ++P + D + W+
Sbjct: 560 EEGLKYFNDMSGVYNLAPKREHY---TAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTS 616
Query: 393 LIMGCTKHGLNSLA 406
++ C H +LA
Sbjct: 617 VLNSCRIHKNYALA 630
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 204/715 (28%), Positives = 336/715 (46%), Gaps = 128/715 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H +++ G D+F N LL+MY L A
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR--------- 116
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
RL++ M E V + +++A + GD + +
Sbjct: 117 ----------------------RLFDRMPERNMVS-----FVTLVQAHAQRGDFEAAAAL 149
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
R+ E E + ++ T+L + + A A G L+GG
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAI----------------AMDAAG--------LAGG-- 183
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------- 240
VH+ K G + + LID Y C + D +FN + +D V WT ++
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 241 ----------------------------------------GCFECSCFTLS--------A 252
G C+ TL+ A
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+DMY+ C + +AR F+ Y +V L + MIS Y + QNE+A L +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIP------YDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
S + + Y+ +S L+AC N++ + F Q+H + G+E D VG+ L+D YA+ ++
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLD--FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
S+L++F L + V+W+ +++G ++ GL A +F +M + Q SSVL+ C
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ AS+R Q+H K F + + SLID Y KCG I D L +F+ + ERD++SW
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II G +G+A +A+ F M +S ++ N+ITF+ +LS C GLV ++F SM+ +
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID 595
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G++P +EHY C+V LLG+AG +DA Q I ++P P +W ++L +C H N L
Sbjct: 596 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
AE++L P+D + YV+LSN+YA G D ++ +RK+ + +G +K G+SW+E+
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEI 710
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 13/329 (3%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKS 374
+DS+ L+ CI ++R VHG +V G LD + L+++Y +LG + S
Sbjct: 57 VDSFACARQLQGCI--ARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A LF R+P++++V++ L+ + G A LFR + +VNQF+++++LK+
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ + VH+ K G + + LID Y C + D +F + +D V WT +
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF-TSMKPEY 553
+ +N + A F +M S KPN VL A V I ++K
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML--KACETHNNTKLVS 611
EPH+ ++D+ + G DA +P+ D I S + + +++ N +
Sbjct: 295 DTEPHVGG--ALLDMYAKCGDIKDARLAFEMIPY--DDVILLSFMISRYAQSNQNEQAFE 350
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ L S P++Y + S + A M
Sbjct: 351 LFLR--LMRSSVLPNEYSLSSVLQACTNM 377
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 204/715 (28%), Positives = 336/715 (46%), Gaps = 128/715 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H +++ G D+F N LL+MY L A
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR--------- 116
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
RL++ M E V + +++A + GD + +
Sbjct: 117 ----------------------RLFDRMPERNMVS-----FVTLVQAHAQRGDFEAAAAL 149
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
R+ E E + ++ T+L + + A A G L+GG
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAI----------------AMDAAG--------LAGG-- 183
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------- 240
VH+ K G + + LID Y C + D +FN + +D V WT ++
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 241 ----------------------------------------GCFECSCFTLS--------A 252
G C+ TL+ A
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+DMY+ C + +AR F+ Y +V L + MIS Y + QNE+A L +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIP------YDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
S + + Y+ +S L+AC N++ + F Q+H + G+E D VG+ L+D YA+ ++
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLD--FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
S+L++F L + V+W+ +++G ++ GL A +F +M + Q SSVL+ C
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ AS+R Q+H K F + + SLID Y KCG I D L +F+ + ERD++SW
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II G +G+A +A+ F M +S ++ N+ITF+ +LS C GLV ++F SM+ +
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID 595
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G++P +EHY C+V LLG+AG +DA Q I ++P P +W ++L +C H N L
Sbjct: 596 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
AE++L P+D + YV+LSN+YA G D ++ +RK+ + +G +K G+SW+E+
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEI 710
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 155/345 (44%), Gaps = 14/345 (4%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--ELDYIV 358
E+ +T L+ I S +DS+ L+ CI ++R VHG +V G LD
Sbjct: 42 EDELTSLA-ILPSVPGVDSFACARQLQGCIA--RGDARGGRAVHGHVVRRGGVGRLDLFC 98
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+++Y +LG + SA LF R+P++++V++ L+ + G A LFR +
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+VNQF+++++LK+ + + VH+ K G + + LID Y C + D
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + +D V WT ++ +N + A F +M S KPN VL A
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 539 VEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
V I ++K EPH+ ++D+ + G DA +P+ D I S
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGG--ALLDMYAKCGDIKDARLAFEMIPY--DDVILLSF 334
Query: 598 L--KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ + +++ N + + L S P++Y + S + A M
Sbjct: 335 MISRYAQSNQNEQAFELFLR--LMRSSVLPNEYSLSSVLQACTNM 377
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 204/696 (29%), Positives = 326/696 (46%), Gaps = 117/696 (16%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HCR IK G D +T NNL++ YA T LN AH++FDEM ++ VSW +++A+ S
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFAS---- 71
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
SGDLD + + R +D+ +
Sbjct: 72 --------------------------------SGDLDTTWQLLGAMRRSTHAFDSRTFGS 99
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
+L G L KL G+Q+H+ +K G + + +
Sbjct: 100 ILKGVAYVGKL--KL------------------------GQQLHSVMLKVGLSENVFSGS 133
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---------------VGCFECSCF-- 248
+L+DMY KCG +DDG +F MPER+ VSW ++ + C E
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEI 193
Query: 249 ---TLSALVDMYSN-----------CNVLCEARKLFDQYSSWAASAYG------------ 282
T+S L+ + N C ++ +LF+ + +AY
Sbjct: 194 DDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVF 253
Query: 283 -------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
++ WNSM+ Y+++E+ + A + + + G D+YT+T + AC +
Sbjct: 254 DGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACS--VQE 311
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN--VKSALELFHRLPKKDVVAWSGL 393
+ +HGL++ G + V + LI +Y R + ++ AL +F + KD W+ +
Sbjct: 312 HKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSI 371
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
+ G + GL+ A LF M +++ + S+V++ CS LA+L+ G+Q H +K GF
Sbjct: 372 LAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGF 431
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +SLI MY KCG I+D F+ + + + W II G Q+G+ A+ F
Sbjct: 432 DTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYM 491
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M + ++K + ITF+ VL+AC H GLVEE SM+ ++G+ P EHY C +DL G+AG
Sbjct: 492 MKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAG 551
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
A L+ MPF+PD + ++L AC + +L S IA+ LL PE+ YV+LS
Sbjct: 552 HLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSE 611
Query: 634 VYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
+Y MW + V + ++ G KK G SWIEV +
Sbjct: 612 MYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKN 647
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 237/546 (43%), Gaps = 60/546 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ +K G+ LH ++K GLS+++F+G+ LL MYA ++D + +F
Sbjct: 93 DSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVF 152
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M +N VSW T+V +Y+ + A + + M E VE + S +L +
Sbjct: 153 QSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCM-ELEGVEIDDGTVSPLLTLLDNAMFY 211
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
L +H +I + LE + N + Y +C SL ++FD A ++ WN
Sbjct: 212 KLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFD-----GAVLCRDLVTWN 266
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
SML G +H EKED+ +DM NF E D ++TGI+
Sbjct: 267 SML-GAYLMH--------EKEDLAFKVFLDMQ-------------NFGFEPDAYTYTGIV 304
Query: 240 VGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
C + S +AL+ MY N C + D + +
Sbjct: 305 GACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRC----MEDALRIFFSM 360
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ WNS+++GYV +E+A+ L + + ID YTF++ +++C +L +
Sbjct: 361 DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATL--QL 418
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q H L + G++ + VGS+LI +Y++ G ++ A + F K + + W+ +I G +
Sbjct: 419 GQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQ 478
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDI 458
HG ++A LF M ++ +VL CS + G + + G
Sbjct: 479 HGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQE 538
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
ID+Y + G + AL + MP E D + ++ C G + A + +++
Sbjct: 539 HYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLE- 597
Query: 518 RLKPNE 523
L+P E
Sbjct: 598 -LEPEE 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 340 ALQVHGLIVTS------GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+L + GLI T G D +NLI YA+ + SA ++F +P +D V+W+ +
Sbjct: 6 SLTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAI 65
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G + L M S + S+LK + + L+ G+Q+H+ +K G
Sbjct: 66 ISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGL 125
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + ++L+DMY KCG +DDG +F+ MPER+ VSW ++ + G A
Sbjct: 126 SENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSC 185
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M ++ ++ T +L+ +A + + + ++GLE L + C + +
Sbjct: 186 MELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKI-VKHGLE--LFNTVCNATITAYSE 242
Query: 574 C--FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
C DAE++ D W SML A H L
Sbjct: 243 CCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDL 280
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 336/650 (51%), Gaps = 39/650 (6%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKL------FDEMARKNIVSWTTMVTAYTSNKRPNW 87
L+Q+ ++ +N+L + ++ L +L FD+M ++ +SWTT++ Y +
Sbjct: 80 LAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYE 139
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A+ L+++M ++ + FM S LKAC L ++ G L+H + L + + L+
Sbjct: 140 ALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALI 199
Query: 148 DMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
DMY+K G + + ++F + + NV W ++++G VHA G+ E L
Sbjct: 200 DMYMKVGKIEQGCRVFKKMTK------RNVVSWTAIIAG--LVHA-----GYNME--ALL 244
Query: 206 SLIDMYL-KCGEIDDGLALF------NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+M++ K G A+ + + T I F+ S F ++ L MY+
Sbjct: 245 YFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYN 304
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
C +LF++ +V W ++I+ YV + E A+ + S + +
Sbjct: 305 KCGKADYVMRLFEKMK------MPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPN 358
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
YTF + + AC NL +++ Q+HG ++ G V ++++ LY++ G +KSA +
Sbjct: 359 KYTFAAVISACANLAI--AKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLV 416
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
FH + +KD+++WS +I ++ G A+ M N+F +SSVL VC +A L
Sbjct: 417 FHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 476
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+GKQVHA + G + E + ++LI MY KCG +++ +F M +++SWT +I G
Sbjct: 477 EQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGY 536
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
++G ++EAI F+++ LKP+ +TF+GVL+AC HAG+V+ + F M EY + P
Sbjct: 537 AEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPS 596
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
EHY C++DLL +AG +AE +I MP D +W+++L++C H + AEQLL
Sbjct: 597 KEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLL 656
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEVS 667
P ++ L+N+YA G W + +RK K G K+ G SW+ V+
Sbjct: 657 RLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVN 706
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 229/558 (41%), Gaps = 97/558 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL+ CG +I G+ LH +K GL +F + L+ MY + ++F +M
Sbjct: 160 ISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMT 219
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++N+VSWT ++ + N LY + V + ++ LKA + S L G+
Sbjct: 220 KRNVVSWTAIIAGLV-HAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGK 278
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + ++ + + ++NTL MY KCG
Sbjct: 279 AIHTQTIKQGFDESSFVINTLATMYNKCGK------------------------------ 308
Query: 186 KQVHAFCVKRGFEK----EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWTG 237
A V R FEK + V+ T+LI Y++ GE + + F M + +V ++
Sbjct: 309 ----ADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAA 364
Query: 238 IIVGCFECSCF--------------------TLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+I C + +++V +YS +L A +F +
Sbjct: 365 VISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITR-- 422
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
++ W+++I+ Y +EA LS + G + + +S L C ++
Sbjct: 423 ----KDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 478
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
QVH ++ G + + +V S LI +Y++ G+V+ A ++F+ + ++++W+ +I G
Sbjct: 479 --GKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGY 536
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF---- 453
+HG + A LF + + + VL CS HA V GF
Sbjct: 537 AEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS-----------HAGMVDLGFYYFM 585
Query: 454 ---EKEDITLTS-----LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRA 504
+ I+ + +ID+ + G + + + + MP D V W+ ++ C +G
Sbjct: 586 LMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDV 645
Query: 505 KEAIAYFQEMIQSRLKPN 522
++++ RL PN
Sbjct: 646 DRGRWTAEQLL--RLDPN 661
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 329/656 (50%), Gaps = 43/656 (6%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H ++ GL++D+ L+S+Y F L+ A +FD + + +SW ++ Y N
Sbjct: 24 MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
+ YN M E + ++S VLKACS S + D GR +H +I + D+ +
Sbjct: 84 FRDIVGFYNRM-RVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFT 141
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCV 193
L+DMY KCG + +R +FD+ + NV W+SM++G G +
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLD------RNVFSWSSMIAGYVQNNLAQDGLVLFNRMR 195
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSA 252
+ E +TL L+ K G + G L G ++ C E + ++A
Sbjct: 196 EELIEANQITLGILVHACKKLGALHQGKWLH------------GYLIKCGIELGSYLVTA 243
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+D+Y+ C V+ +AR +FD+ ++ W +MI GY N EEA+ L
Sbjct: 244 LLDLYAKCGVVRDARSVFDELHGI------DIVSWTAMIVGYTQNGCPEEALKLFLQKEQ 297
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ + T S +C LLN N +HGL + G D IV ++L+D YA+
Sbjct: 298 VAVLPNDVTIASVFSSCSQLLNLN--LGRSIHGLSIKLGSR-DPIVTNSLVDFYAKCQMN 354
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F + +DVVAW+ +I +++G A LF M + + + SVL C
Sbjct: 355 RDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSAC 414
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ L +L+ G HA+ VKRG ++ + T+L+ Y KCG+ + +F M ++ V+W
Sbjct: 415 ASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTW 474
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+ +I G G G + +++ F +M+++ LKPNE F +LSAC H G++ E W +FT +
Sbjct: 475 SAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQ 534
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+Y L P +HY CMVDLL +AG +A I +MP +PD +++ + L C H+ L
Sbjct: 535 DYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGE 594
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ +++L P D YV++ N+YA+ W + +VR+ K+ G K G S +E+
Sbjct: 595 LAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEM 650
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 228/564 (40%), Gaps = 106/564 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C + R+ +G+ +HC+I+K+G + D F L+ MYA + + +FDE +
Sbjct: 108 HVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDR 166
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+ SW++M+ Y N + L+N M E +E N ++ AC G L G+ +
Sbjct: 167 NVFSWSSMIAGYVQNNLAQDGLVLFNRMRE-ELIEANQITLGILVHACKKLGALHQGKWL 225
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG------- 173
H + + +E + L+ LLD+Y KCG + R +FD+ +W A G
Sbjct: 226 HGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCP 285
Query: 174 -----------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
N S+ S G+ +H +K G ++ + SL
Sbjct: 286 EEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSL 344
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+D Y KC D +F + +RDVV+W II S F
Sbjct: 345 VDFYAKCQMNRDARYVFETISDRDVVAWNSII------SAF------------------- 379
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
S SAY + L++ M G VL D+ T S L
Sbjct: 380 -------SQNGSAYEALELFHQMRMGSVLP--------------------DAVTLVSVLS 412
Query: 328 AC--INLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
AC +N L S F H V G + VG+ L+ YA+ G+ +SA +F + +
Sbjct: 413 ACASLNALQVGSSF----HAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQ 468
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
K V WS +I G G + +F DM+ + N+ I +S+L CS + G ++
Sbjct: 469 KSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRL 528
Query: 445 HA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
C T ++D+ + G + + L + MP + DV + + GCG +
Sbjct: 529 FTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHS 588
Query: 503 RAKEAIAYFQEMIQSRLKPNEITF 526
R + M++ L P + +
Sbjct: 589 RFDLGELAIKRMLE--LHPGDACY 610
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 205/490 (41%), Gaps = 108/490 (22%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + ++ QGK LH +IK G+ + LL +YA + DA +FDE+ +IVSW
Sbjct: 213 CKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSW 272
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T M+ YT N P A++L+ E +V PN ++V +CS +L+LGR IH ++
Sbjct: 273 TAMIVGYTQNGCPEEALKLFLQK-EQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHG-LS 330
Query: 133 REKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSN-----WAA---------SAYGNVA 176
+ D ++ N+L+D Y KC R +F+ S+ W + SAY +
Sbjct: 331 IKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALE 390
Query: 177 LWNSMLSG------------------------GKQVHAFCVKRGFEKEDVTL-TSLIDMY 211
L++ M G G HA+ VKRG +V + T+L+ Y
Sbjct: 391 LFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFY 450
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
KCG+ + +F+ M ++ V+W+ +I G
Sbjct: 451 AKCGDAESARVIFDGMDQKSTVTWSAMISG------------------------------ 480
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT-LLSHIHSSGMCIDSYTFTSALKACI 330
+ G+++++ M+ + + NEE T +LS +GM + + + +
Sbjct: 481 --YGIQGNGRGSLSIFGDMLKAEL--KPNEEIFTSILSACSHTGMIGEGWRLFTMICQDY 536
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVA 389
NL+ + + ++DL AR G +K AL+ ++P + DV
Sbjct: 537 NLVPSTKHY--------------------TCMVDLLARAGRLKEALDFIQKMPVQPDVSL 576
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRR---GKQVH 445
+ + GC H L L + M+ + D +++ +C+ AS R KQV
Sbjct: 577 FGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVL-----MCNLYASDARWSKVKQVR 631
Query: 446 AFCVKRGFEK 455
+RG K
Sbjct: 632 ELMKQRGLMK 641
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+++H +V G D + L+ LY G + A +F +P D ++W +I +
Sbjct: 22 MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVII---RWY 78
Query: 401 GLNSLAYLLFRDMINSN-------QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
LNS FRD++ ++ + + S VLK CS + G++VH VK G
Sbjct: 79 FLNS----EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG- 133
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ T L+DMY KCGEI+ ++F +R+V SW+ +I G QN A++ + F
Sbjct: 134 NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNR 193
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M + ++ N+IT ++ AC+ G + + W +K L +L ++DL +
Sbjct: 194 MREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYL--VTALLDLYAKC 251
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASML 598
G DA + E+ D W +M+
Sbjct: 252 GVVRDARSVFDEL-HGIDIVSWTAMI 276
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I C Q ++ G+S+H IK G S+D N+L+ YA DA +F+ ++
Sbjct: 307 IASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETIS 365
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V+W ++++A++ N A+ L+ H + GSV P+ +VL AC+ L +G
Sbjct: 366 DRDVVAWNSIISAFSQNGSAYEALELF-HQMRMGSVLPDAVTLVSVLSACASLNALQVGS 424
Query: 126 LIHERITREKLEYDTVLMNT-LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
H + L V + T LL Y KCG R +FD + W++M+
Sbjct: 425 SFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQ------KSTVTWSAMI 478
Query: 183 SG-GKQ--------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
SG G Q + +K + + TS++ G I +G LF +
Sbjct: 479 SGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMI 532
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 207/661 (31%), Positives = 331/661 (50%), Gaps = 113/661 (17%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG------SLTRKLFD 162
S +LKAC SG+L+LG+L+H ++ L D+VL+N+L+ +Y KCG S+ R +
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 163 QYSN---WAA--SAYGN-----------------------------VALWNS-----MLS 183
+ W+A S + N AL S +
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 184 GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCG-EIDDGLALFNFMPERDVVSWTGIIV- 240
G + AF +K G+ V + +LIDM+ K G +I +F+ M +++V+WT +I
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 241 ----------------------------------GCFECSCFTLS--------------- 251
C E F+L
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282
Query: 252 -----ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
LVDMY+ + +RK+F+ + NV W ++ISGYV + Q +EAI L
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTM------LHHNVMSWTALISGYVQSRQEQEAIKL 336
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
++ + + +TF+S LKAC +L +F Q+HG + G VG++LI++Y
Sbjct: 337 FCNMLHGHVTPNCFTFSSVLKACASLPDFG--IGKQLHGQTIKLGLSTINCVGNSLINMY 394
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
AR G ++ A + F+ L +K++++++ K L+S ++ ++ + F +
Sbjct: 395 ARSGTMECARKAFNILFEKNLISYNTAADANAK-ALDSDESF-NHEVEHTGVGASPFTYA 452
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+L +C+ ++ +G+Q+HA VK GF +LI MY KCG + L +F M R
Sbjct: 453 CLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR 512
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+V++WT II G ++G A +A+ F EM++ +KPNE+T++ VLSAC H GL++EAW F
Sbjct: 513 NVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHF 572
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
SM + + P +EHY CMVDLLG++G +A + I MPF D +W + L +C H N
Sbjct: 573 NSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRN 632
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
TKL A+++L P DP+ Y++LSN+YA+ G WD ++ +RK+ K K K+ G SWIE
Sbjct: 633 TKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIE 692
Query: 666 V 666
V
Sbjct: 693 V 693
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 39/270 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + GK LH +I+ GL+ D+F G L+ MYA ++ ++ K+F+ M N+
Sbjct: 255 LSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNV 314
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT +++ Y +++ AI+L+ +ML +G V PN F +S+VLKAC+ D +G+ +H
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNML-HGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS------- 180
+ + L + N+L++MY + G++ RK F+ +Y A N+
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDE 433
Query: 181 --------------------MLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMY 211
+LSG G+Q+HA VK GF +LI MY
Sbjct: 434 SFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMY 493
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
KCG + L +FN M R+V++WT II G
Sbjct: 494 SKCGNKEAALQVFNDMGYRNVITWTSIISG 523
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 340/691 (49%), Gaps = 96/691 (13%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-------LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
C + RS+ QG+ +H ++ L+ + GN+L++MY
Sbjct: 54 CSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG---------------- 97
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N VSW +++ A+ N R A+ L++ ML G+ + F + ++AC+ GD+ GR
Sbjct: 98 -RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA-ADQFALGSAVRACTELGDVGTGR 155
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H + + D ++ N L+ MY K G + LF++ + ++ W S+++
Sbjct: 156 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD------KDLISWGSIIA 209
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLI--------------DMYLKCGEIDD--------GL 221
G Q +GFE E + + + + CG + GL
Sbjct: 210 GFAQ-------QGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 262
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
++ + +RD + VGC +L DMY+ C L AR F + +
Sbjct: 263 SI-KYRLDRD------LYVGC---------SLSDMYARCKNLDSARVAFYRIEA------ 300
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
++ WNS+++ Y + EA+ L S + SG+ D T L AC+ R AL
Sbjct: 301 PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVG------RDAL 354
Query: 342 Q----VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+H +V G + D V ++L+ +YAR ++ SA+++FH + +DVV W+ ++ C
Sbjct: 355 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTAC 414
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+H LF + S +++ +++VL + L KQVHA+ K G +
Sbjct: 415 AQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDR 474
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ +LID Y KCG +DD + LF+ M RDV SW+ +IVG Q G AKEA F M
Sbjct: 475 MLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRS 534
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
++PN +TF+GVL+AC G V E ++ M+PEYG+ P EH C+VDLL +AG
Sbjct: 535 LGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLT 594
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+A I +MPF+PD +W ++L A + HN+ ++ AE +L P + YV+L N+YA
Sbjct: 595 EAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYA 654
Query: 637 TLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
G W+ ++++KA + G KK+ G SW+++
Sbjct: 655 ASGNWNEFARLKKAMRTSGVKKSPGKSWVKL 685
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 224/523 (42%), Gaps = 88/523 (16%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITRE-------KLEYDTVLMNTLLDMYVKCG-SLTRK 159
Y+A++ ACS L GR +H + +L +TVL N L+ MY + S
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRNPVSWASV 106
Query: 160 LFDQYSNWAASAYGNVALWNSML-SG-----------------------GKQVHAFCVKR 195
+ N A + L++SML SG G+QVHA +K
Sbjct: 107 IAAHVQN--GRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKS 164
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ + +L+ MY K G +DDG LF + ++D++SW II G F F + AL
Sbjct: 165 ERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG-FAQQGFEMEAL-- 221
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
++F E I SH H
Sbjct: 222 ------------QVF------------------------------REMIVEGSH-HP--- 235
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + F SA +AC + ++ + Q+HGL + + D VG +L D+YAR N+ SA
Sbjct: 236 --NEFHFGSAFRACGAVGSW--EYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSA 291
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
F+R+ D+V+W+ ++ + GL S A +LF +M +S + + +L C
Sbjct: 292 RVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGR 351
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+L G+ +H++ VK G + + SL+ MY +C ++ + +F + ++DVV+W I+
Sbjct: 352 DALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSIL 411
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
C Q+ +E + F + +S + I+ VLSA G E + + + GL
Sbjct: 412 TACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH-AYAFKAGL 470
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++D + G DDA +L M D W+S++
Sbjct: 471 VDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLI 513
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 129/631 (20%), Positives = 240/631 (38%), Gaps = 127/631 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+R C + + G+ +H +K D+ N L++MY+ ++D LF+ + K+
Sbjct: 141 AVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKD 200
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SW +++ + A++++ M+ GS PN F + + +AC G + G IH
Sbjct: 201 LISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIH 260
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ +L+ D + +L DMY +C +L Y A ++ WNS+++
Sbjct: 261 GLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAP----DLVSWNSIVNAYSVE 316
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
G+ +H++ VK G + +
Sbjct: 317 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 376
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL+ MY +C ++ + +F+ + ++DVV+W I+ C +
Sbjct: 377 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------------------- 416
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ EE + L S ++ S +D + +
Sbjct: 417 --------------------------------HNHPEEVLKLFSLLNKSEPSLDRISLNN 444
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
L A L F QVH +G D ++ + LID YA+ G++ A+ LF +
Sbjct: 445 VLSASAELGYF--EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 502
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+DV +WS LI+G + G A+ LF M + N VL CS + + G
Sbjct: 503 NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 562
Query: 444 VHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQN 501
++ + G + ++D+ + G++ + MP E D++ W ++ +
Sbjct: 563 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 622
Query: 502 G------RAKEAI---------AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
RA E I AY N F + A R +G+ + +
Sbjct: 623 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 682
Query: 547 TSMKPEYGL-------EPHLEHYYCMVDLLG 570
+K E + P E Y M++L+G
Sbjct: 683 VKLKGELKVFIVEDRSHPESEEIYAMLELIG 713
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 340/669 (50%), Gaps = 41/669 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G +LH RI+ GLS D + ++L++ YA F + A K+FD M +N+
Sbjct: 68 LKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNV 127
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V WTT++ Y+ R A L++ M G ++P+ ++L S +L + +H
Sbjct: 128 VPWTTIIGCYSRTGRVPEAFSLFDEMRRQG-IQPSSVTVLSLLFGVS---ELAHVQCLHG 183
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
D L N++L++Y KCG++ +RKLFD + ++ WNS++S Q
Sbjct: 184 CAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMD------HRDLVSWNSLISAYAQ 237
Query: 188 VHAFCVK---------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ C +GFE T S++ + GE+ G L I
Sbjct: 238 IGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHG-----------QI 286
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ F ++L+ +Y + A ++F++ S+ +V LW +MISG V N
Sbjct: 287 LRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFER------SSDKDVVLWTAMISGLVQNG 340
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++A+ + + G+ + T S + AC L ++N + G I+ LD
Sbjct: 341 SADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN--LGTSILGYILRQELPLDVAT 398
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++L+ +YA+ G++ + +F + ++D+V+W+ ++ G ++G A LF +M + NQ
Sbjct: 399 QNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQ 458
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ I S+L+ C+ L GK +H+F ++ G + TSL+DMY KCG++D
Sbjct: 459 TPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQR 518
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F MP D+VSW+ IIVG G +G+ + A+ ++ + ++S +KPN + FL VLS+C H GL
Sbjct: 519 CFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGL 578
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VE+ I+ SM ++G+ P LEH+ C+VDLL +AG ++A + + P + +L
Sbjct: 579 VEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIIL 638
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC + N +L IA +L P D +V L++ YA++ W+ + + + LG KK
Sbjct: 639 DACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKK 698
Query: 659 -AGMSWIEV 666
G S+I++
Sbjct: 699 IPGWSFIDI 707
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 12/321 (3%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D+YTF S LKAC + LN S L +H I+ SG LD + S+LI+ YA+ G A +
Sbjct: 60 DAYTFPSLLKAC-SFLNLFS-LGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARK 117
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F +P+++VV W+ +I ++ G A+ LF +M + + S+L S LA
Sbjct: 118 VFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAH 177
Query: 438 LRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ + +H + GF DI L+ S++++Y KCG I+ LF +M RD+VSW +I
Sbjct: 178 V---QCLHGCAILYGF-MSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLIS 233
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYGL 555
Q G E + + M + TF VLS G ++ + ++ + L
Sbjct: 234 AYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYL 293
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
+ H+E +V L G G D A ++ E D +W +M+ + + +
Sbjct: 294 DAHVETSLIVVYLKG--GKIDIAFRMF-ERSSDKDVVLWTAMISGLVQNGSADKALAVFR 350
Query: 616 QLLATSPEDPSKYVMLSNVYA 636
Q+L + PS M S + A
Sbjct: 351 QMLKFGVK-PSTATMASVITA 370
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+ M+ ++ + + S+LK CS L G +H + G + +SLI+ Y K
Sbjct: 49 YASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAK 108
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G D +F +MPER+VV WT II + GR EA + F EM + ++P+ +T L +
Sbjct: 109 FGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSL 168
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L V+ YG + M+++ G+ G + + +L M +
Sbjct: 169 LFGVSELAHVQ----CLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHR- 223
Query: 590 DKTIWASMLKA 600
D W S++ A
Sbjct: 224 DLVSWNSLISA 234
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L+ C + GK +H +I+ GL I +L+ MY L+ A + F++M
Sbjct: 465 IVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMP 524
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VSW+ ++ Y + + A+R Y+ LE G ++PN ++ +VL +CS +G ++ G
Sbjct: 525 SHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESG-MKPNHVIFLSVLSSCSHNGLVEQGL 583
Query: 126 LIHERITRE 134
I+E +T++
Sbjct: 584 NIYESMTKD 592
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 323/643 (50%), Gaps = 43/643 (6%)
Query: 42 NNLLSMYADFTS--LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG 99
N LL+ Y+ + L A ++FDE+ R++ VSW ++ A ++ A RL M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
+ N F + L++ +++ +G + + L + + LLD+Y KCG +
Sbjct: 89 -LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLI 208
R++FD N WN++++G G A + + G ++ T SL+
Sbjct: 148 RQVFDGMPE------RNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL 201
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+G + F + G +G L+A + YS C L ++R+
Sbjct: 202 TAV-------EGPSCFLMHQLHGKIVKYGSALG-----LTVLNAAITAYSQCGSLKDSRR 249
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCIDSYTFTSALK 327
+FD ++ WN+M+ Y N ++EA+ + SG+ D Y+FTS +
Sbjct: 250 IFDGIGD-----IRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIIS 304
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN---VKSALELFHRLPK 384
+C + + +HGL++ S E V + LI +Y R ++ A + F+ L
Sbjct: 305 SC-SEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVL 363
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KD V+W+ ++ G ++HGL++ A FR M + N +++ S+ L+ S LA L+ GKQ+
Sbjct: 364 KDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQI 423
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H + GF D +SLI MY K G IDD F+ + V W +I G Q+G+A
Sbjct: 424 HGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQA 483
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+ F EM+Q + + ITF+G++++C HAGLV+E I +M+ +YG+ +EHY C
Sbjct: 484 ENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYAC 543
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
VDL G+AG D A++LI MPF+PD +W ++L AC H N +L S +A L P
Sbjct: 544 GVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQ 603
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
S YV+LS++Y+ LGMW + V++ KK G K G SWIEV
Sbjct: 604 HSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEV 646
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 223/513 (43%), Gaps = 36/513 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR R G L +K GL+ ++F + LL +YA + DA ++FD M +N
Sbjct: 99 ALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERN 158
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ YT + A+ L+ M G + P+ ++++L A + +L H
Sbjct: 159 TVSWNALIAGYTESGDMASALELFLEMEREG-LAPDEATFASLLTAVEGPSCFLMHQL-H 216
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+I + ++N + Y +CGSL +R++FD + ++ WN+ML
Sbjct: 217 GKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-----IRDLISWNAMLGAYT 271
Query: 185 ----GKQVHAFCVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ F V+ G + + TS+I + G D + + +
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL--------- 322
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+I E +AL+ MY+ N C + D Y + + + WNSM++GY
Sbjct: 323 -VIKSALEGVTPVCNALIAMYTRYNENC---MMEDAYKCFNSLVLKDTVSWNSMLTGYSQ 378
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ + +A+ + S + D Y F++AL++ L + Q+HGL++ SG+ +
Sbjct: 379 HGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVL--QLGKQIHGLVIHSGFASND 436
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V S+LI +Y++ G + A + F K V W+ +I G +HG +LF +M+
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ CS + G ++ + K G +D+Y + G++D
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
L MP E D + W ++ C +G + A
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 33/381 (8%)
Query: 241 GCF----ECSCFTLSALVDMYSNCNV--LCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
CF C+ + L+ YS + L AR++FD+ + WN++++
Sbjct: 15 ACFPKSGSCATTPWNQLLTAYSRSSPDGLAAARRVFDEVPR------RDEVSWNALLAAQ 68
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+ + EA LL +H+ G+ +++ SAL++ + Q+ L + SG
Sbjct: 69 AASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA--VARRPAIGAQLQSLALKSGLAN 126
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ S L+D+YA+ G V+ A ++F +P+++ V+W+ LI G T+ G + A LF +M
Sbjct: 127 NVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEME 186
Query: 415 NSNQDVNQFIISSVLKVC---SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
++ +S+L SC Q+H VK G L + I Y +CG
Sbjct: 187 REGLAPDEATFASLLTAVEGPSCFLM----HQLHGKIVKYGSALGLTVLNAAITAYSQCG 242
Query: 472 EIDDGLALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGV 529
+ D +F + + RD++SW ++ NG EA+ +F M+Q S + P+ +F +
Sbjct: 243 SLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSI 302
Query: 530 LSACR------HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+S+C H G V I ++++ G+ P M + +DA +
Sbjct: 303 ISSCSEHGHDDHQGRVIHGLVIKSALE---GVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 584 EMPFKPDKTIWASMLKACETH 604
+ K D W SML H
Sbjct: 360 SLVLK-DTVSWNSMLTGYSQH 379
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 320/647 (49%), Gaps = 67/647 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R++ + + + + + + IF N + Y L DA +LFDEM +++ SW
Sbjct: 69 CSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQRDGGSW 128
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+TAYT N A+ LY + + G V +++L++C L R IH I
Sbjct: 129 NAMITAYTQNGYALEALNLYLDLNKSG-VYATEVTLASILRSCGSVLALHFSRQIHGHIV 187
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----W------------------ 167
+ + +L ++L+D+Y KC + R +FD+ N W
Sbjct: 188 KCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVS 247
Query: 168 ------------AASAYGNVALWNSMLSG---GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
++ + N + S ++ G Q+H VK G E+ +V +SLIDMY+
Sbjct: 248 MFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVISSSLIDMYV 307
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG + + +F R+++SWT ++ Y+ + +AR+LF++
Sbjct: 308 KCGTLANAHQVFTQPSSRNLISWTSMVYA---------------YATSGDVLKARELFNE 352
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
NV WN+M++GY+ + Q EEA+ + + SS ID T L C
Sbjct: 353 MPE------RNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTG- 405
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWS 391
+ + QVHG + +G+ + +G+ L+D+Y + GN+KSA F+++ + +D V+W+
Sbjct: 406 -SSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWN 464
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ +HG++ A +F +M D N F +++L C+ + +L GKQ+H F V+
Sbjct: 465 ALLTAHARHGMSEQAMTIFSEM-QLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRN 523
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+ + + +L+DMY KC E+ L +F+ + RDVV W II+GC N R AI F
Sbjct: 524 NYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLF 583
Query: 512 QEM-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
Q M ++ +KP+ +TF G+L AC H LVE F SM ++ + P LEHY CMV+L G
Sbjct: 584 QLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYG 643
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
Q G D+ E+ I MPF P + + AC H +++L +A +L
Sbjct: 644 QHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLAEWVAIRL 690
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 135/577 (23%), Positives = 230/577 (39%), Gaps = 139/577 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG ++ + +H I+K G ++ ++L+ +Y +NDA +FDE+ +N
Sbjct: 167 LRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRND 226
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +V Y A+ ++ M S+ P+ F +S L ACS L G IH
Sbjct: 227 VSWNVIVRRYLEVGNGKEAVSMFFQMFR-ESLMPSSFTFSNALIACSRMAALIEGGQIHG 285
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG--------- 173
+ + LE + V+ ++L+DMYVKCG+L ++F Q S +W + Y
Sbjct: 286 IVVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLK 345
Query: 174 -----------NVALWNSMLSG-------------------------------------- 184
NV WN+ML+G
Sbjct: 346 ARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTG 405
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTG 237
GKQVH F + GF +L+DMY KCG + F M + RD VSW
Sbjct: 406 SSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNA 465
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ + + +
Sbjct: 466 LL----------------------------------------------------TAHARH 473
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+E+A+T+ S + +++TF + L AC N+ F Q+HG +V + Y +D +
Sbjct: 474 GMSEQAMTIFSEMQLE-TDPNNFTFATLLGACANM--FALEHGKQIHGFMVRNNYAIDIV 530
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INS 416
+ L+D+Y + +K AL++F + +DVV W+ +I+GC + + LA LF+ M +
Sbjct: 531 LTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEE 590
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQV-----HAFCVKRGFEKEDITLTSLIDMYLKCG 471
+ +L C + G++ FCV E + ++++Y + G
Sbjct: 591 GIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYE----CMVELYGQHG 646
Query: 472 EIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
+D+ MP + V I C ++G ++ A
Sbjct: 647 NMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLA 683
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 80/309 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + ++ +G +H ++K GL ++ ++L+ MY +L +AH++F + + +N
Sbjct: 267 ALIACSRMAALIEGGQIHGIVVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRN 326
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN----GFMYSA-------------- 110
++SWT+MV AY ++ A L+N M E + N G+++S+
Sbjct: 327 LISWTSMVYAYATSGDVLKARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRS 386
Query: 111 ------------VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+L C+ S D++ G+ +H + R + + N LLDMY KCG+L
Sbjct: 387 SIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKS 446
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
+ F Q S W + WN++L+
Sbjct: 447 AKVWFYQMSQWR-----DKVSWNALLTAHARHGMSEQAMTIFSEMQLETDPNNFTFATLL 501
Query: 185 -----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
GKQ+H F V+ + + V +L+DMY KC E+ L +F + RDVV
Sbjct: 502 GACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVV 561
Query: 234 SWTGIIVGC 242
W II+GC
Sbjct: 562 LWNSIILGC 570
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I+ Y + G +K A ELF +P++D +W+ +I T++G A L+ D+ S +
Sbjct: 101 IEAYGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATE 160
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++S+L+ C + +L +Q+H VK GF I +SL+D+Y KC ++D ++F
Sbjct: 161 VTLASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDE 220
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC-RHAGLVEE 541
+ R+ VSW I+ + G KEA++ F +M + L P+ TF L AC R A L+E
Sbjct: 221 IQNRNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEG 280
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+K GLE + ++D+ + G +A Q+ + P + W SM+ A
Sbjct: 281 GQIHGIVVK--VGLEENEVISSSLIDMYVKCGTLANAHQVFTQ-PSSRNLISWTSMVYAY 337
Query: 602 ETHNNTKLVSIIAEQLLATSPE 623
T + + A +L PE
Sbjct: 338 ATSGDV----LKARELFNEMPE 355
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 200/671 (29%), Positives = 345/671 (51%), Gaps = 62/671 (9%)
Query: 19 IKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKNIVSWTTMV 76
++ G++LH R+++ L +D N+LL++Y+ ++ A +FD M ++IVSWT M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N ++ L MLE G + PN + AV AC +L K+
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLL-PNAYTLCAVAHAC-FPHELYCLVGGVVLGLVHKM 181
Query: 137 EY---DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
D + + L+DM + G L RK+FD V +W ++S + V
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIE------KTVVVWTLLIS--RYVQGE 233
Query: 192 CVKR-----------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
C + GFE + T++S+I + G + GL L + S
Sbjct: 234 CAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFAS-----D 288
Query: 241 GCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
C C LVDMY+ N+ + A K+F++ +V W ++ISGYV +
Sbjct: 289 ACVSC------GLVDMYAKSNIEQAMDYANKVFERMRK------NDVISWTALISGYVQS 336
Query: 298 E-QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
Q + + L + + + + T++S LKAC N+ + +S QVH ++ S +
Sbjct: 337 GVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDS--GRQVHAHVIKSNQAAAH 394
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VG+ L+ +YA G ++ A +F++L ++ +++ C G ++ L +
Sbjct: 395 TVGNALVSMYAESGCMEEARRVFNQLYERSMIS-------CITEGRDAP---LDHRIGRM 444
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ +S++ + + L +G+Q+HA +K GF + SL+ MY +CG ++D
Sbjct: 445 DMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
F + +R+V+SWT +I G ++G A+ A++ F +MI + +KPN++T++ VLSAC H
Sbjct: 505 CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E F SM+ ++GL P +EHY CMVDLL ++G +A + I EMP K D +W +
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKT 624
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L AC +H+N ++ I A+ ++ P DP+ YV+LSN+YA G+WD ++++R A +
Sbjct: 625 LLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684
Query: 656 EKKAGMSWIEV 666
K+ G+SW+EV
Sbjct: 685 NKETGLSWMEV 695
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 215/726 (29%), Positives = 351/726 (48%), Gaps = 136/726 (18%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R++ W ++ + T + AI Y ML + N F + AVLKA + DL LG+
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDN-FAFPAVLKAAAAVHDLCLGK 350
Query: 126 LIHERITR--EKLEYDTVLMNTLLDMYVKCGSLT--RKLFD------------------Q 163
IH + + + N+L++MY KCG LT R++FD +
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR 410
Query: 164 YSNWAASAY-----------------GNVALWNSMLSGG----KQVHAFCVKRGFEKEDV 202
+ W S + +VA S + GG KQVHA+ ++ G +
Sbjct: 411 FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTY 469
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--------------------------- 235
T +L+ MY + G ++D ALF +D+VSW
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529
Query: 236 --------TGIIVGCF---------ECSCFTL------------SALVDMYSNCNVLCEA 266
++ C E C+ L +ALVDMY NC +
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSA 325
R +FD VA+WN++++GY NE +++A+ L + I S C ++ TF S
Sbjct: 590 RLVFD------GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASV 643
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L AC+ F+ + +HG IV G+ D V + L+D+Y+R+G V+ + +F R+ K+
Sbjct: 644 LPACVRCKVFSDKEG--IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR 701
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDM------------INSNQD------VNQFIISS 427
D+V+W+ +I GC G A L +M ++ D N + +
Sbjct: 702 DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMT 761
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL C+ LA+L +GK++HA+ VK+ + ++L+DMY KCG ++ +F MP R+
Sbjct: 762 VLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRN 821
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMI------QSRLKPNEITFLGVLSACRHAGLVEE 541
V++W +I+ G +G+ +EA+ F+ M + ++PNE+T++ + +AC H+G+V+E
Sbjct: 822 VITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDE 881
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKA 600
+F +MK +G+EP +HY C+VDLLG++G +A +LI MP +K W+S+L A
Sbjct: 882 GLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGA 941
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H + + I A+ L P S YV++SN+Y++ G+WD VRK K++G K+
Sbjct: 942 CRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEP 1001
Query: 660 GMSWIE 665
G SWIE
Sbjct: 1002 GCSWIE 1007
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 183/435 (42%), Gaps = 66/435 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+ L C Q ++ G+ +HC ++ G L ++ F G L+ MY + +FD +
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
R+ + W ++ Y N+ + A+RL+ M+ PN +++VL AC
Sbjct: 597 VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK 656
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSML 182
IH I + D + N L+DMY + G +++ +F + + ++ WN+M+
Sbjct: 657 EGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNK------RDIVSWNTMI 710
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI---------DDGLALFNFMPERDVV 233
+G C+ G + D L L +M + GE DDG F + + V
Sbjct: 711 TG-------CIVCG--RYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPF----KPNSV 757
Query: 234 SWTGIIVGCF---------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
+ ++ GC E + + SALVDMY+ C L A ++FDQ
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG------MCIDSYTFTSALK 327
NV WN +I Y ++ + EEA+ L + + G + + T+ +
Sbjct: 818 P------IRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFA 871
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--K 385
AC + + L H + + G E + L+DL R G VK A EL + +P
Sbjct: 872 ACSHSGMVDEGLHL-FHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLN 930
Query: 386 DVVAWSGLIMGCTKH 400
V AWS L+ C H
Sbjct: 931 KVDAWSSLLGACRIH 945
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 133/326 (40%), Gaps = 54/326 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + + +H I+K G +D + N L+ MY+ + + +F M +++I
Sbjct: 644 LPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDI 703
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHML----EYGS-------------VEPNGFMYSAVL 112
VSW TM+T R + A+ L + M E GS +PN VL
Sbjct: 704 VSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVL 763
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAAS 170
C+ L G+ IH ++KL D + + L+DMY KCG +L ++FDQ
Sbjct: 764 PGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMP----- 818
Query: 171 AYGNVALWNSMLSG----GKQVHAFCVKR------GFEKE-----DVTLTSLIDMYLKCG 215
NV WN ++ GK A + R G +E +VT ++ G
Sbjct: 819 -IRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+D+GL LF+ M V G C LVD+ + EA +L +
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYAC----------LVDLLGRSGRVKEAYELINTMP- 926
Query: 276 WAASAYGNVALWNSMISGYVLNEQNE 301
S V W+S++ +++ E
Sbjct: 927 ---SNLNKVDAWSSLLGACRIHQSVE 949
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 212/714 (29%), Positives = 333/714 (46%), Gaps = 123/714 (17%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
+ +LFDE ++ + ++ ++ N + A+ L+ + GS +G S VLK C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCG 103
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGN 174
D +G+ +H + + D + +L+DMY+K S+ ++FD+ N
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR------VKN 157
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
V W S+L+G G QVH
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW----TGIIVGCFECS 246
+K G + S+++MY K + D A+F+ M R+ VSW G + +
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277
Query: 247 CFTL---------------------------------------------------SALVD 255
F L +AL+
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
YS C+ + +A KLF NV W ++ISGYV N + + A+ L + G+
Sbjct: 338 AYSKCSEIDDAFKLF-----CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGV 392
Query: 316 CIDSYTFTSALKACINLLNFNSRFAL-QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ +T+++ L A N+ + Q+H L+V + YE VG+ L D Y+++G+
Sbjct: 393 RPNHFTYSTILTA-------NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANE 445
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ++F + +KD+VAWS ++ G + G A +F + + N+F SSVL C+
Sbjct: 446 AAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAA 505
Query: 435 -LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
AS+ +GKQ H+ +K GF ++L+ MY K G I+ +FK +RD+VSW
Sbjct: 506 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 565
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G Q+G K+++ F+EM L+ + ITF+GV+SAC HAGLV E F M +Y
Sbjct: 566 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 625
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+ P +EHY CMVDL +AG + A LI +MPF TIW ++L AC H N +L +
Sbjct: 626 HIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 685
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
AE+L++ P+D + YV+LSN+YAT G W +KVRK K +K+AG SWIEV
Sbjct: 686 AEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEV 739
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 269/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G + + TSLI MY++ G ++D +F+ P RDVVS+T +I G
Sbjct: 110 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG--- 166
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN+MISGY +EA+
Sbjct: 167 ------------YASRGYIENAQKMFDEI------PVKDVVSWNAMISGYAETGNYKEAL 208
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + + LID
Sbjct: 209 ELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELGRQVHSWIDDHGFGSNLKIVNALID 266
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G +++A LF LP KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 267 LYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 326
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 327 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNS 386
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + + SW +I G +GRA + F M ++ ++P++ITF+G+LSAC H+G+++
Sbjct: 387 ILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 446
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 447 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 506
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+ L+ PE+P YV+LSN+YAT G W+ ++ R G KK G
Sbjct: 507 MHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGC 566
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 567 SSIEIDS 573
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 148/289 (51%), Gaps = 33/289 (11%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LK+C F Q
Sbjct: 55 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE--GQQ 112
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ G +LD V ++LI + YA G
Sbjct: 113 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGY 172
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+++A ++F +P KDVV+W+ +I G + G A LF+DM+ +N ++ + +V+
Sbjct: 173 IENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 232
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+QVH++ GF + +LID+Y KCGE++ LF+ +P +DV+SW
Sbjct: 233 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISW 292
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+I G KEA+ FQEM++S PN++T L +L AC H G ++
Sbjct: 293 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 341
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 191/441 (43%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + ++ K+G+ +H ++K G D++ +L+SMY L DAH
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
K+FDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG L
Sbjct: 218 -NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 277 ACGLFE------GLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 330
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A
Sbjct: 331 LPACAHLGAIDIGRWIHVYIDKR--------LKGVANASSLRTS-LIDMYAKCGDIEAAH 381
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + + + + S + +G+ D TF L
Sbjct: 382 QVFN------SILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLS 435
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + DY + L IDL G K A E+ +
Sbjct: 436 AC-------SHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINT 488
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+ + D V W L+ C HG
Sbjct: 489 MEMEPDGVIWCSLLKACKMHG 509
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/598 (21%), Positives = 231/598 (38%), Gaps = 172/598 (28%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ +H ++IK GL + + L+ + F L A +F+ + N++ W TM +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ P A++LY M+ G + PN + + +LK+C+ S G+ IH + + + D
Sbjct: 67 ALSSDPVSALKLYVCMISLGLL-PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------------- 172
+ +L+ MYV+ G L K+FD+ + +A+ Y
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 173 GNVALWNSMLSG--------------------------------------------GKQV 188
+V WN+M+SG G+QV
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
H++ GF + +LID+Y KCGE++ LF +P +DV+SW +I G
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG------- 298
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
Y++ N+ EA LF +
Sbjct: 299 --------YTHMNLYKEALLLFQE------------------------------------ 314
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ SG + T S L AC +L + + V+ G + ++LID+YA+
Sbjct: 315 -MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAK 373
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G++++A ++F+ + K + +W+ +I G HG ++ +F M
Sbjct: 374 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM--------------- 418
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
K G E +DIT L+ G +D G +F+ M +
Sbjct: 419 --------------------RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 458
Query: 489 VSWTGIIVGC-----GQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSACRHAGLVE 540
++ GC G +G KEA +EMI + ++P+ + + +L AC+ G VE
Sbjct: 459 MTPKLEHYGCMIDLLGHSGLFKEA----EEMINTMEMEPDGVIWCSLLKACKMHGNVE 512
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 149/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG--- 65
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + + G+Q+H +K G + +
Sbjct: 66 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVV--------------------------- 489
TSLI MY++ G ++D +F P RDVV
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 490 ----SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
SW +I G + G KEA+ F++M+++ ++P+E T + V+SAC +G +E +
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L +P+K D W +++ TH
Sbjct: 246 HSWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGGY-THM 302
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 303 NLYKEALLLFQEMLRSGETPNDVTMLS 329
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y+ L A LF
Sbjct: 222 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 281
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 282 EGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAI 340
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L +L+DMY KCG + ++F+ + + S+
Sbjct: 341 DIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS------ 394
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ +F + K G E +D+T L+ G +D G +F M
Sbjct: 395 WNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 454
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
+ ++ GC ++D+ + + EA ++ + W A
Sbjct: 455 QDYKMTPKLEHYGC----------MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 504
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GNV L S + + +N + LLS+I+++
Sbjct: 505 CKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATA 542
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 309/611 (50%), Gaps = 69/611 (11%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y +VL+ C+ + GR IH I +E D VL + L+ MYV CG L R++FD+ +
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAF-----CVKRGFE------------------KEDV 202
N V LWN +++G ++ F KR E ++ +
Sbjct: 164 N------EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWTGIIVGCFECSCFTL-------- 250
+ S+I Y+ G + GL LF M D+ + ++ GC L
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYA 277
Query: 251 ------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ L+DMYS L A ++F+ + V W SMI+GY
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS------VVSWTSMIAGYAREG 331
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDY 356
++ ++ L + G+ D +T T+ L AC LL N + VH I + + D
Sbjct: 332 LSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLE-NGK---DVHNYIKENKMQSDL 387
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V + L+D+YA+ G++ A +F + KD+V+W+ +I G +K+ L + A LF +M
Sbjct: 388 FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QY 446
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N N ++ +L C+ LA+L RG+++H ++ GF + +L+DMYLKCG +
Sbjct: 447 NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 506
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF +PE+D+VSWT +I G G +G EAIA F EM S ++P+E++F+ +L AC H+
Sbjct: 507 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHS 566
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL++E W F M+ +EP EHY C+VDLL +AG A + I MP +PD TIW +
Sbjct: 567 GLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGA 626
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLG 655
+L C +++ KL +AE + PE+ YV+L+N+YA W+ + K+R + G++
Sbjct: 627 LLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGL 686
Query: 656 EKKAGMSWIEV 666
K G SWIE+
Sbjct: 687 RKNPGCSWIEI 697
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 186/452 (41%), Gaps = 126/452 (27%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL +V + C + G++LH IK +++ N LL MY+ +LN A ++F
Sbjct: 250 DLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVF 309
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M +++VSWT+M+ Y + ++RL+ H +E + P+ F + +L AC+ +G L
Sbjct: 310 ETMGERSVVSWTSMIAGYAREGLSDMSVRLF-HEMEKEGISPDIFTITTILHACACTGLL 368
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+ G+ +H I K++ D + N L+DMY KCGS+ D +S ++ ++ WN+M
Sbjct: 369 ENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMG----DAHSVFSEMQVKDIVSWNTM 424
Query: 182 LSG-------------------------------------------GKQVHAFCVKRGFE 198
+ G G+++H ++ GF
Sbjct: 425 IGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFS 484
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ +L+DMYLKCG + LF+ +PE+D+VSWT +I G
Sbjct: 485 LDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG----------------- 527
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+ YG+ EAI + + +SG+ D
Sbjct: 528 -----------------YGMHGYGS------------------EAIAAFNEMRNSGIEPD 552
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LIDLY 366
+F S L AC H ++ G+ ++ +N ++DL
Sbjct: 553 EVSFISILYAC-------------SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLL 599
Query: 367 ARLGNVKSALELFHRLP-KKDVVAWSGLIMGC 397
AR GN+ A + +P + D W L+ GC
Sbjct: 600 ARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 631
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 117/283 (41%), Gaps = 86/283 (30%)
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
+ LGN++ A+EL ++ PK D+ ++ +
Sbjct: 78 FCELGNLRRAMELINQSPKPDL-------------------------------ELRTY-- 104
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG--------- 476
SVL++C+ L S++ G+++H+ E + + + L+ MY+ CG++ +G
Sbjct: 105 CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVAN 164
Query: 477 ----------------------LALFKFMPE------------------RDVVSWTGIIV 496
L+LFK M E RDV+SW +I
Sbjct: 165 EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMIS 224
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGL 555
G NG +++ + F++M+ + + T + V++ C + G++ + ++K +G
Sbjct: 225 GYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGK 284
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E L + C++D+ ++G + A Q+ M + W SM+
Sbjct: 285 ELTLNN--CLLDMYSKSGNLNSAIQVFETMGER-SVVSWTSMI 324
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 211/706 (29%), Positives = 354/706 (50%), Gaps = 75/706 (10%)
Query: 1 MDLRRI-VEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAH 58
+D RR V L+ C R + + +K G +S + N+LL +Y+ + A
Sbjct: 3 VDCRRYYVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIAR 62
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
LFDEM +N SW TM+ Y ++ ++R ++ M E +G+ ++ V+ + +
Sbjct: 63 NLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMM-----PERDGYSWNVVISGFAKA 117
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVA 176
G+L + R + + + E D V +N+LL Y+ G +LF + ++A A
Sbjct: 118 GELSVARRLFDAMP----EKDVVTLNSLLHGYILNGYSEEALRLFKEL-KFSADAITLTT 172
Query: 177 LWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+ + L GKQ+HA + G E + +SL+++Y KCG+ L + ++M E+
Sbjct: 173 VLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD----LRMASYMLEQ- 227
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+G E +LS L+ Y+NC + E+R+LFD+ S+ V LWNSMI
Sbjct: 228 --------IG--EPDDHSLSTLISGYANCGRVNESRRLFDRKSNRC------VILWNSMI 271
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
SGY+ N EA+ L + + + DS T + + ACI L + Q+H G
Sbjct: 272 SGYIANNMKFEALVLFNEMRNETW-EDSRTLAAVINACIGLGFLET--GKQMHCHACKFG 328
Query: 352 YELDYIVGSNLIDLYARLGN-------------------------------VKSALELFH 380
D +V S L+D+Y++ G+ + A +F
Sbjct: 329 LVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 388
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
R+ K +++W+ + G +++G F M + ++ +SSV+ C+ ++SL
Sbjct: 389 RIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGL 448
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+QV A G + + I +SLID+Y KCG +++G +F M + D V W +I G
Sbjct: 449 GEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYAT 508
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG EAI F++M + ++P +ITF+ VL+AC + GLVEE +F +MK ++G P E
Sbjct: 509 NGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKE 568
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H+ CMVDLL +AG ++A L+ EMPF D ++W+S+L+ C + + +AE+++
Sbjct: 569 HFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEKIIEL 628
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
PE+ YV LS ++AT G W+S + VRK ++ K G SW +
Sbjct: 629 EPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNPGSSWAD 674
>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 214/733 (29%), Positives = 343/733 (46%), Gaps = 95/733 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG + G+ +H ++K D F N L+SMY +L DA +F + + ++
Sbjct: 69 LRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDL 128
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W+++++ Y N +R++ M+ G +EP+ F +S VL AC+ D G H
Sbjct: 129 VGWSSILSGYVKNGLEEEGLRIFCDMVS-GGIEPDAFAFSMVLGACTNLECWDFGTQAHC 187
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + + L N+L+D Y KCG L R++F S N+ WN+ ++G
Sbjct: 188 YIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSE------KNLVSWNTFINGYVH 241
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK++H + ++ G E
Sbjct: 242 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYV 301
Query: 204 LTSLIDMYLKC-------GEIDDGLALFNFMPE--RDVVSWTGIIVGC------------ 242
++SL+DMY+ C ++ L L N++ D T ++ C
Sbjct: 302 VSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLESGKMF 361
Query: 243 --------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ + LS+L+DMYS C + A+++F + + A W+++ISG+
Sbjct: 362 HSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQ------PDTAPWSALISGH 415
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N EA+ L + G+ + +TFTS + AC+ L N R ++H I+ SGYE
Sbjct: 416 SWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENL--RKGKELHCKILRSGYES 473
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
++ V + LI+LY+ L K AL+L +P ++ +W+ LI C + + L +
Sbjct: 474 NFSVVNTLINLYSELWQHKQALKLCSMIPDSEI-SWNFLIRACLGAEDYEIIHKLLWRIQ 532
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S+ +++ + CS L G Q HA+ KRG SLI MY CG+ D
Sbjct: 533 VSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFD 592
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ + F MPE+D SWT I+ ++G EA+ +M ++ TF VL+AC
Sbjct: 593 EAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACA 652
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP-FKPDKTI 593
GLV+EA+ +F SMK YG+EP EHY CMV++LG+AG F++ I +P FK I
Sbjct: 653 QMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEEVLDFINGVPTFKLGPLI 712
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W ++L + H N K+ AE+LL P D S ++L V TLG WD+ K++ K
Sbjct: 713 WRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVLLTLGEWDNALKLKTKTKS 772
Query: 654 LGEKKAGMSWIEV 666
+ +A SWIE+
Sbjct: 773 M---RASSSWIEI 782
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/678 (24%), Positives = 295/678 (43%), Gaps = 102/678 (15%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML---EYGSVEP 103
MY + ++ +A KLFDEM +++VSWT +++ Y + + + ++ ML G + P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQ 163
+ F+++ VL+AC + L GR +H + ++ D+ + N L+ MY CG+L
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALED----- 115
Query: 164 YSNWAASAYGNV-----ALWNSMLSG---------------------------------- 184
AA +G + W+S+LSG
Sbjct: 116 ----AAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLG 171
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G Q H + +K GF+ SL+D Y KCG+++ +F+ M E+++VS
Sbjct: 172 ACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVS 231
Query: 235 WTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
W I G +C F+L +++ S L +++
Sbjct: 232 WNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYI- 290
Query: 275 SWAASAYGNVALWNSMISGYV-------LNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
A N + +S++ Y+ L + E + LL+++ G D + TS LK
Sbjct: 291 -LRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGY--DEFIMTSLLK 347
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C L + H LI+ + D V S+LID+Y++ G ++A +F R+ + D
Sbjct: 348 WCS--LESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDT 405
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
WS LI G + +G + A LFR M N+F +SV+ C L +LR+GK++H
Sbjct: 406 APWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCK 465
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC--GQNGRAK 505
++ G+E + +LI++Y + + L L +P+ + +SW +I C ++
Sbjct: 466 ILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRACLGAEDYEII 524
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
+ + ++ L P ++ + ++C L+ M + GL H +
Sbjct: 525 HKLLWRIQVSHGNLDP--VSACDIFASCSSPVLLNVGTQAHAYMT-KRGLISHPTISNSL 581
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN-TKLVSIIAEQLLATSPED 624
+ + G FD+A Q MP K D W S+L A H + ++ +++I++ P D
Sbjct: 582 IQMYSACGKFDEAVQAFNLMPEK-DTCSWTSILSARVEHGHPSEALNLISQMRWKNKPAD 640
Query: 625 PSKYVMLSNVYATLGMWD 642
S + + N A +G+ D
Sbjct: 641 QSTFRSVLNACAQMGLVD 658
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 191/413 (46%), Gaps = 38/413 (9%)
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL-SHIHSSG 314
MY N + EARKLFD+ ++ W ++SGY + E + + + SG
Sbjct: 1 MYVNAGAMQEARKLFDEMPE------RSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSG 54
Query: 315 ---MCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ DS+ F L+AC + L++ VHGL+V +D V + L+ +Y
Sbjct: 55 GGLLRPDSFVFAVVLRACGMVECLSYGR----GVHGLVVKQSSVVDSFVENALVSMYGSC 110
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G ++ A +F + K D+V WS ++ G K+GL +F DM++ + + F S VL
Sbjct: 111 GALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVL 170
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ L G Q H + +K GF+ SL+D Y KCG+++ +F M E+++V
Sbjct: 171 GACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLV 230
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW I G N EA+ FQ +++ + ++ + L +L A G ++ I
Sbjct: 231 SWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHG-- 288
Query: 550 KPEYGLEPHLE-HYYCMVDLLGQ-AGCFDDAEQLIA--EMPFKP---------DKTIWAS 596
Y L +E + Y + LL GC D E L E+P K D+ I S
Sbjct: 289 ---YILRAGIETNRYVVSSLLDMYIGCIDH-ESLYPRVEVPLKLLNYLEGGGYDEFIMTS 344
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM--LSNVYATLGMWDSLSKV 647
+LK C ++ + + ++ + S YV+ L ++Y+ G+W++ +V
Sbjct: 345 LLKWCSLESSLESGKMFHSLIIKLDLKSDS-YVLSSLIDMYSKCGIWEAAKRV 396
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/691 (28%), Positives = 349/691 (50%), Gaps = 60/691 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-------------DFTSLND 56
L+ C Q RS+K GK+LHC +++ N+LL+MY+ DF + +
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
++FD M ++N+V+W TM++ Y +R A +++ M+ G + P + V A
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVW 229
Query: 117 LSGDLDLGRLIHERITREKLEY--DTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAY 172
D D +++ + + +Y D ++++ + MY + C R++FD
Sbjct: 230 RMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFD------CCLE 283
Query: 173 GNVALWNSMLSGGKQ----VHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
N +WN+M+ G Q + A + F +DVT S + + +D G
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
L ++ + + I L+A++ MYS C + + K+F
Sbjct: 344 LHAYILKSSTILQVVI-----------LNAIIVMYSRCGSIGTSFKVFSNMLE------R 386
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+V WN+M+S +V N ++E + L+ + G +DS T T+ L NL + Q
Sbjct: 387 DVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRS--QEIGKQ 444
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKH 400
H ++ G + + + G LID+YA+ G + +A +LF + +D W+ +I G T++
Sbjct: 445 AHAYLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQN 503
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
GL+ + +FR MI N N ++S+L C+ + ++ GKQ+H F ++ +
Sbjct: 504 GLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVG 563
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
T+L+DMY K G I +F E++ V++T +I+ GQ+G + A++ F M+ S +K
Sbjct: 564 TALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIK 623
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+ +TF+ +LSAC +AGLV+E IF SM+ EY ++P EHY C+ D+LG+ G +A +
Sbjct: 624 PDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYE 683
Query: 581 LIAEMPFKPDK-TIWASMLKACETHNNTKLVSIIAEQLLATSPED--PSKYVMLSNVYAT 637
+ + + + IW S+L AC H +L ++A +LL +V+LSN+YA
Sbjct: 684 FVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAA 743
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
G WD++ +VRK ++ G K+AG SW+EV+
Sbjct: 744 EGNWDNVDRVRKEMRQKGLMKEAGCSWVEVA 774
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 159/607 (26%), Positives = 266/607 (43%), Gaps = 84/607 (13%)
Query: 55 NDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
+ A LFD + R V W T++ + N P A+ Y M S + + + +S+ LKA
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS---------------LTRK 159
C+ + L LG+ +H + R ++ N+LL+MY C + L R+
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 160 LFDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCVKR-----GFEKEDVTLTSLIDM 210
+FD NV WN+M+S + + AF + R G V+ ++
Sbjct: 174 VFDTMRK------RNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ + D+ L+ VV V F F +S+ + MY+ + AR++F
Sbjct: 228 VWRMNDYDNANVLYGL-----VVKLGSDYVDDF----FVVSSAIFMYAELGCVDFAREIF 278
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKAC 329
D N +WN+MI GYV N EAI L + S +D TF SAL A
Sbjct: 279 D------CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAI 332
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + Q+H I+ S L ++ + +I +Y+R G++ ++ ++F + ++DVV
Sbjct: 333 SQLQWLD--LGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVT 390
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ ++GL+ +L +M V+ ++++L + S L S GKQ HA+ +
Sbjct: 391 WNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI 450
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEA 507
+ G + E + LIDMY K G I LF+ +RD +W +I G QNG ++E
Sbjct: 451 RHGIQFEGMD-GYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG 509
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLV---------------EEAWTIFTSMKPE 552
A F++MI+ ++PN +T +L AC G + + + T++
Sbjct: 510 FAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDM 569
Query: 553 YG---------------LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM---PFKPDKTIW 594
Y LE + Y M+ GQ G + A L M KPD +
Sbjct: 570 YSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTF 629
Query: 595 ASMLKAC 601
++L AC
Sbjct: 630 VAILSAC 636
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 184/426 (43%), Gaps = 61/426 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + AL Q + + G+ LH I+K + N ++ MY+ S+ + K+
Sbjct: 320 LDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLS 118
F M +++V+W TMV+A+ N + + L M + GFM +V SL+
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEM------QKQGFMVDSVTLTALLSLA 433
Query: 119 GDL---DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYG 173
+L ++G+ H + R ++++ + L+DMY K G +T ++LF++ S +
Sbjct: 434 SNLRSQEIGKQAHAYLIRHGIQFEG-MDGYLIDMYAKSGLITTAQQLFEKNSXYDR---- 488
Query: 174 NVALWNSMLSG----GKQVHAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALF 224
+ A WN+M++G G F V R +++ VTL S++ G I G +
Sbjct: 489 DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 225 NFMPERDVVSWTGIIVGCF-ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F + CF + F +AL+DMYS + A +F A + N
Sbjct: 549 GFA------------IRCFLNQNVFVGTALLDMYSKSGAITYAENVF------AETLEKN 590
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ +MI Y + E A++L + SG+ DS TF + L AC S L
Sbjct: 591 SVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC-------SYAGLVD 643
Query: 344 HGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKK--DVVAWSGLIM 395
GL + E +Y + + + D+ R+G V A E L ++ W L+
Sbjct: 644 EGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLG 703
Query: 396 GCTKHG 401
C HG
Sbjct: 704 ACRIHG 709
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS-NQDVNQFIIS 426
R G+ AL LF +P+ V W+ +I+G + + A L + M S + + + S
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC-------------GEI 473
S LK C+ SL+ GK +H ++ F I SL++MY C
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
D +F M +R+VV+W +I + R EA F+ M++ ++P ++F+ V A
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 126/334 (37%), Gaps = 69/334 (20%)
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G L LF+ +P V W II+G F C+ + AL LF Y+
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIG-FICNNMPIDAL---------------LF--YA 92
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
AS DSYTF+S LKAC +
Sbjct: 93 RMRASPSPK---------------------------------FDSYTFSSTLKACAQARS 119
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR-------------LGNVKSALELFHR 381
AL H ++ S + IV ++L+++Y+ N +F
Sbjct: 120 LKLGKALHCH--VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ K++VVAW+ +I K A+ +FR M+ +V +
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNA 237
Query: 442 KQVHAFCVKRGFEKED--ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
++ VK G + D ++S I MY + G +D +F ER+ W +I G
Sbjct: 238 NVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYV 297
Query: 500 QNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSA 532
QN EAI F ++++S + +++TFL L+A
Sbjct: 298 QNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTA 331
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 339/669 (50%), Gaps = 41/669 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R+C +++ K LH R++ Q++ L+++Y ++ A FD + +++
Sbjct: 61 FRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W M++ Y + IR ++ + + P+ + +VLKAC D G IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ +D + +L+ +Y + ++ R LFD+ ++ WN+M+SG
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM------PVRDMGSWNAMISGYCQ 228
Query: 185 -GKQVHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G A + G D VT+ SL+ + G+ + G+ + ++ + +
Sbjct: 229 SGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL---------- 278
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
E F + L+D+Y+ L + +K+FD+ ++ WNS+I Y LNEQ
Sbjct: 279 -ESELFVSNKLIDLYAEFGRLRDCQKVFDRM------YVRDLISWNSIIKAYELNEQPLR 331
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN 361
AI+L + S + D T S L + ++ L + R V G + G+ L D +G+
Sbjct: 332 AISLFQEMRLSRIQPDCLTLIS-LASILSQLG-DIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DV 420
++ +YA+LG V SA +F+ LP DV++W+ +I G ++G S A ++ M +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
NQ SVL CS +LR+G ++H +K G + +TSL DMY KCG ++D L+LF
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+P + V W +I G +G ++A+ F+EM+ +KP+ ITF+ +LSAC H+GLV+
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F M+ +YG+ P L+HY CMVD+ G+AG + A + I M +PD +IW ++L A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H N L I +E L PE +V+LSN+YA+ G W+ + ++R G K
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 660 GMSWIEVSS 668
G S +EV +
Sbjct: 690 GWSSMEVDN 698
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 176/457 (38%), Gaps = 123/457 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD +V L C + +G ++H IK+GL ++F N L+ +YA+F L D K+
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++++SW +++ AY N++P AI L+ M ++P+ ++ S GD
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGD 363
Query: 121 LDLGRLIHERITREK--LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
+ R + R+ LE D + N ++ MY K G + R +F NW + +V
Sbjct: 364 IRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVF----NWLPNT--DVI 416
Query: 177 LWNSMLSG---------------------------------------------GKQVHAF 191
WN+++SG G ++H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
+K G + +TSL DMY KCG ++D L+LF +P + V W +I C F
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA----CHGF--- 529
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+ E+A+ L +
Sbjct: 530 ---------------------------------------------HGHGEKAVMLFKEML 544
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDL 365
G+ D TF + L AC S L G + DY + +L +D+
Sbjct: 545 DEGVKPDHITFVTLLSAC-------SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 366 YARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
Y R G +++AL+ + + D W L+ C HG
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 324/654 (49%), Gaps = 55/654 (8%)
Query: 14 GQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G R ++ ++HC I+K L + F N+LL+ YA L A ++FDEM N+ +
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++A ++ RL+ M E +V Y+A++ S +G ++ +
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVS-----YNALITGFSSTGSPARSVQLYRALL 137
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
RE+ T + + + M ASA + AL G VH
Sbjct: 138 REESVRPTRITLSAMIM------------------VASALSDRAL-------GHSVHCQV 172
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
++ GF + L+DMY K G I D +F M + VV + +I G
Sbjct: 173 LRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL--------- 223
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
C ++ +A+ LF + W +M++G N EA+ + + +
Sbjct: 224 ------RCKMIEDAKGLFQLMVDR------DSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ ID YTF S L AC L Q+H I + YE + VGS L+D+Y++ ++
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEE--GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F R+ +++++W+ +I+G ++ + A F +M + F + SV+ C
Sbjct: 330 RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LASL G Q H + G + +L+ +Y KCG I+D LF M D VSWT
Sbjct: 390 ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ G Q G+AKE I F++M+ + LKP+ +TF+GVLSAC AGLVE+ F SM+ +
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD 509
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G+ P +HY CM+DL ++G F +AE+ I +MP PD WA++L +C N ++
Sbjct: 510 HGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
AE LL T P++P+ YV+L +++A G W ++ +R+ + + +K+ G SWI+
Sbjct: 570 AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 218/492 (44%), Gaps = 58/492 (11%)
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEID 218
L ++Y+ +SA G+ ++G VH +K + L L+ Y K G +
Sbjct: 8 LCNRYAAILSSAAGDGGRTGVRVAGA--VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLA 65
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+F+ MP+ ++ FT +AL+ ++ ++ + +LF A
Sbjct: 66 RARRVFDEMPDPNL---------------FTRNALLSALAHSRLVPDMERLFASMPERDA 110
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+Y N++I+G+ ++ L + + SA+ + L+ +
Sbjct: 111 VSY------NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS-DRA 163
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK------------- 385
VH ++ G+ VGS L+D+YA++G ++ A +F + K
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223
Query: 386 ------------------DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
D + W+ ++ G T++GL A +FR M ++Q+ S
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C LA+L GKQ+HA+ + +E ++L+DMY KC I A+F+ M R+
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
++SWT +IVG GQN ++EA+ F EM +KP++ T V+S+C + +EE F
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFH 402
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ GL ++ +V L G+ G +DA +L EM F D+ W +++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKA 461
Query: 608 KLVSIIAEQLLA 619
K + E++LA
Sbjct: 462 KETIDLFEKMLA 473
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 33/294 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG ++++GK +H I + ++F G+ L+ MY+ S+ A +F M +NI
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ Y N A+R ++ M + ++P+ F +V+ +C+ L+ G H
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
L + N L+ +Y KCGS+ +LFD+ S + + W ++++G Q
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS------FHDQVSWTALVTGYAQ 457
Query: 188 -------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ F + G + + VT ++ + G ++ G F+ M ++D GI
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM-QKD----HGI 512
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ +C ++D+YS EA + Q + A+G W +++S
Sbjct: 513 VPIDDHYTC-----MIDLYSRSGRFKEAEEFIKQMPH-SPDAFG----WATLLS 556
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 337/659 (51%), Gaps = 42/659 (6%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H + K GL +++ G+ L++MYA + ++ A ++F+ + +NIV W M+ +
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + ++ M +G +P+ F ++++ AC+ L+ G +H + + K +
Sbjct: 388 NGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH----AF---- 191
+ N L+DMY K G+L RK F+ + NV+ WN+++ G Q AF
Sbjct: 447 VANALVDMYAKSGALKEARKQFE-----LMKIHDNVS-WNAIIVGYVQEEYNDEAFFMFR 500
Query: 192 -CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
V G ++V+L S++ E+ G + + VG +C
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLL----------VKVGLDTSTC-AG 549
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S+L+DMY C V+ AR +F S NV N++I+GY + EEAI L I
Sbjct: 550 SSLIDMYVKCGVVLAARDVFYSMPSR------NVVSVNALIAGYTMGHL-EEAIHLFQEI 602
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNLIDLYARL 369
G+ TF L C N Q+HG ++ G+ +V +L+ LY
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLN--LGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNS 660
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
+ LF L K +V W+ LI G + + A ++ M + N +Q +SV
Sbjct: 661 QRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASV 720
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD- 487
L+ C+ ++SL+ G+++H+ GF +++T +SLIDMY KCG++ L +F+ MP R+
Sbjct: 721 LRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNN 780
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+SW +IVG +NG A+EA+ F++M Q + P+E+TFLGVLSAC HAG V E +F
Sbjct: 781 VISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFD 840
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
M Y L+P ++H CMVD+LG+ G ++AE+ I ++ K D +W+++L AC H +
Sbjct: 841 LMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDE 900
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
A++L+ P+ S YV+LS++YA W +R+ K G KK G SWIE
Sbjct: 901 VRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/657 (25%), Positives = 285/657 (43%), Gaps = 85/657 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +HC + K G F L+ MYA L DA +FD +
Sbjct: 149 LSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDT 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT ++ Y + P A+++++ M G P+ V+ A G L R +
Sbjct: 209 VSWTALIAGYVRDGFPMEAVKVFDRMQRVGHA-PDQITLVTVVNAYVALGRLADARKLFT 267
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG------SLTRKLFDQYSNWAASAYGNV--ALWN-S 180
+I + V N ++ + K G S +L S+ G+V A+ + S
Sbjct: 268 QIPNP----NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
ML+ G VHA K G + ++L++MY KC ++D +FN + ER++V W ++
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 241 G------------CFEC------------------SCFTL-------------------- 250
G F C +C +L
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443
Query: 251 -----SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALVDMY+ L EARK F+ + NV+ WN++I GYV E N+EA
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFE-----LMKIHDNVS-WNAIIVGYVQEEYNDEAFF 497
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ + S+G+ D + S + AC N+ + Q H L+V G + GS+LID+
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQEL--KRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G V +A ++F+ +P ++VV+ + LI G T L A LF+++ +
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEE-AIHLFQEIQMVGLKPTEVTF 614
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGF-EKEDITLTSLIDMYLKCGEIDDGLALF-KFM 483
+ +L C L G+Q+H +K GF ++ SL+ +Y+ D LF +
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+ +V WT +I G Q ++A+ ++Q M + P++ F VL AC ++
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
Query: 544 TIFTSMKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + + +++ C ++D+ + G + Q+ EMP + + W SM+
Sbjct: 735 EIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/653 (23%), Positives = 297/653 (45%), Gaps = 76/653 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+++ K +H + +K G+ GN ++ +Y +++ A K F + +K++ +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ Y + ++ + M + V PN F ++ VL ACS D++ GR +H + +
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNH-EVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHA 190
+ + L+DMY KC L R +FD N + W ++++G G + A
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNL------DTVSWTALIAGYVRDGFPMEA 227
Query: 191 FCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---- 241
V + G + +TL ++++ Y+ G + D LF +P +VV+W +I G
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKR 287
Query: 242 ----------------CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ + +L +++ ++ ++L + Q + NV
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLD--DNVY 345
Query: 286 LWNSMISGY-----------VLNEQNEEAITL----LSHIHSSGMCIDSYTFTSALK--- 327
+ +++++ Y V N E I L L +G+ + F S +K
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHG 405
Query: 328 -------------ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
AC +L N F Q+H +++ + + + V + L+D+YA+ G +K
Sbjct: 406 PQPDEFTFTSIFSACASLHYLN--FGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKE 463
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A + F + D V+W+ +I+G + N A+ +FR M+++ ++ ++S++ C+
Sbjct: 464 ARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ L+RG+Q H VK G + +SLIDMY+KCG + +F MP R+VVS +
Sbjct: 524 VQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNAL 583
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G G +EAI FQE+ LKP E+TF G+L C A ++ I + ++G
Sbjct: 584 IAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM-KWG 641
Query: 555 LEPHLEHY-YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
E ++ L + F D+E L +E+ + +W +++ N+
Sbjct: 642 FLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNH 694
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 243/522 (46%), Gaps = 48/522 (9%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + G LH +IK + ++F N L+ MYA +L +A K F+ M + VSW
Sbjct: 420 CASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSW 479
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ Y + + A ++ M+ G V P+ ++++ AC+ +L G+ H +
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVQELKRGQQCHCLLV 538
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ L+ T ++L+DMYVKCG + R +F YS + NV N++++G
Sbjct: 539 KVGLDTSTCAGSSLIDMYVKCGVVLAARDVF--YSMPSR----NVVSVNALIAGYTMGHL 592
Query: 185 GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--RDVVSWTGIIV 240
+ +H F + G + +VT L+D C DG + N + V+ W
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLD---GC----DGAFMLNLGRQIHGQVMKW----- 640
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFD--QYSSWAASAYGNVALWNSMISGYVLNE 298
G S +L+ +Y N ++ LF QY + +W ++ISGY
Sbjct: 641 GFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPK-------GLVVWTALISGYAQQN 693
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+E+A+ H+ S + D F S L+AC + + + ++H LI +G+ +D +
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQN--GQEIHSLIFHTGFNMDEVT 751
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
S+LID+YA+ G+VK +L++F +P++ +V++W+ +I+G K+G A +F+ M +
Sbjct: 752 CSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQS 811
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDG 476
++ VL CS + G++V V + L ++D+ + G +++
Sbjct: 812 IIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEA 871
Query: 477 LALF-KFMPERDVVSWTGIIVGCGQNG---RAKEAIAYFQEM 514
K + D + W+ ++ C ++G R K A E+
Sbjct: 872 EEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMEL 913
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 14/320 (4%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H + G L ++G+ ++DLY + GNV A + F RL KKDV AW+ ++ HGL
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ F M N N+F + VL CS L + G+QVH K GF
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LIDMY KC + D +F D VSWT +I G ++G EA+ F M + P+
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+IT + V++A G + +A +FT + P++ + M+ + G ++A
Sbjct: 243 QITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGFAEEAISFF 297
Query: 583 AEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYAT 637
E+ K ++ S+L A + + S++ Q +D + YV L N+YA
Sbjct: 298 LELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD-NVYVGSALVNMYAK 356
Query: 638 LGMWDSLSKVRKAGKKLGEK 657
D+ +V + LGE+
Sbjct: 357 CSKMDAAKQVFNS---LGER 373
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D LR C S++ G+ +H I G + D T ++L+ MYA + + ++F
Sbjct: 713 DQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVF 772
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
EM R+ N++SW +M+ N A+ ++ M E S+ P+ + VL ACS +G
Sbjct: 773 REMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM-EQQSIIPDEVTFLGVLSACSHAGR 831
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+ GR + + + KL+ + ++D+ + G L +++ N + LW+
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEA--EEFIN-KLGCKADPMLWS 888
Query: 180 SMLSGGKQVHAFCVKRGFE 198
++L C K G E
Sbjct: 889 TLLGA-------CRKHGDE 900
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L +L K +H+ +K G + + ++D+Y+KCG +D F + ++DV +W +
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+ +G + F M ++PNE TF VLSAC
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSAC 152
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 330/663 (49%), Gaps = 42/663 (6%)
Query: 19 IKQGKSLHC-RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++G +H ++ +++ + N ++S + F L+ A +LFD M + VSWT ++
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI---HERITRE 134
Y + + A RLY M G +EP+ Y ++ S G+L+ +I H + +
Sbjct: 114 GYLQSNQSKEAFRLYADM-RRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 135 KLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAA-------SAYGNVALWNSMLSGG 185
EY+ ++ N+L+D Y K C L +LF N + Y N L +
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++H G + D T +L+ + + G + F+ + + V W
Sbjct: 230 LELH----NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFV-W---------- 274
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F +AL+D YS + + E KLF + +Y N +I+ Y N Q +E+
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISY------NVVITSYAWNGQFKESFD 328
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + + F + L + LN R Q+H +T G + V + L+D+
Sbjct: 329 LFRKLQFTRFDRRQFPFATLLSIATSSLNL--RMGRQIHCQAITVGANFESRVENALVDM 386
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
YA+ K A ++F + K V W+ +I + G + +F DM + +Q
Sbjct: 387 YAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+S+L+ C+ LAS+ G+Q+H+ ++ GF + ++L+D Y KCG + D + F MPE
Sbjct: 447 ASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+ VSW +I QNG + FQ+MIQS KP+ ++FL VLSAC H G VEEA
Sbjct: 507 RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM Y + P EHY MVD+L + G FD+AE+L+ EMPF+P + +W+S+L +C H
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHK 626
Query: 606 NTKLVSIIAEQLLATSP-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSW 663
N +L A++L D + Y+ +SN+YA G WD+++KV+KA + G +K SW
Sbjct: 627 NHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSW 686
Query: 664 IEV 666
+E+
Sbjct: 687 VEI 689
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ G+ +HC+ I G + + N L+ MYA +A K+FD +A K+ V WT M++
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY + I +++ M G V + ++++L+AC+ + LGR +H + R
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTG-VPADQATFASILRACANLASISLGRQLHSLLIRSGFM 475
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHA 190
+ + LLD Y KCG +T D ++ N WN+++S Q +++
Sbjct: 476 SNVYSGSALLDTYAKCGCMT----DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531
Query: 191 F--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
F ++ G++ + V+ S++ CG +++ L FN M +
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C SI G+ LH +I+ G ++++G+ LL YA + DA K F EM +N
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
VSW +++AY N + + + M++ G +P+ + +VL ACS G
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCG 558
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 414 INSNQDVNQFIISSVLKVCSCLAS------LRRGKQVHAFCV-KRGFEKEDITLTSLIDM 466
+NSN ++ I+ + +C ++ L RG VHA V + K I+L +I
Sbjct: 24 LNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+LK G++ LF M ER VSWT +I G Q+ ++KEA + +M + ++P+ +T
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ +LS I T + + G E +L +VD + C A QL M
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHV-IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHML 202
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
K T + M N + + + E L S PS + + + A +G+ D+
Sbjct: 203 NKDTVTFNSLMTGYSNEGLNEEAIELFLE--LHNSGIKPSDFTFAALLSAAVGLDDT 257
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 305/571 (53%), Gaps = 40/571 (7%)
Query: 111 VLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW 167
+L+AC D+++GR +HE ++ + D VL ++ MY CGS + R +FD+
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR- 169
Query: 168 AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTS--LIDMYLKC------GEIDD 219
N+ WN+++S + F E +++T + L C G +D
Sbjct: 170 -----KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224
Query: 220 GLA--LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA-RKLFDQYSSW 276
GL + + D+VS F +AL+ MY C ++ EA +++FD +
Sbjct: 225 GLGQIIHGMATKMDLVS-----------DVFVGNALIAMYGKCGLVEEAVKRVFDLMDTK 273
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
S+ WN+++ GY N +A+ L + SG+ D +T S L AC + + +
Sbjct: 274 TVSS------WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLH 327
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
+ ++HG + +G +D +G +L+ LY G +A LF + + +V+W+ +I G
Sbjct: 328 --YGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 385
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+++GL A LFR M++ + I V CS L++LR GK++H F +K ++
Sbjct: 386 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 445
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+S+IDMY K G I +F + E+DV SW II G G +GR KEA+ F++M++
Sbjct: 446 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 505
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
LKP++ TF G+L AC HAGLVE+ F M + +EP LEHY C+VD+LG+AG D
Sbjct: 506 LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 565
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
DA +LI EMP PD IW+S+L +C H N L +A +LL PE P YV++SN++A
Sbjct: 566 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G WD + +VR K +G +K AG SWIEV
Sbjct: 626 GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEV 656
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 209/503 (41%), Gaps = 131/503 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CGQR+ I+ G+ LH + D +++MY+ S +D+ +FD++ RKN
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +V+AYT N+ A+ +++ ++ +P+ F V+KAC+ DL LG++IH
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG---SLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
T+ L D + N L+ MY KCG +++FD S+ WN++L G
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSS------WNALLCGY 285
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
G+++H F ++ G +
Sbjct: 286 AQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 345
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------------- 241
SL+ +Y+ CG+ LF+ M R +VSW +I G
Sbjct: 346 FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 405
Query: 242 ------------CFECS------------CFTL-----------SALVDMYSNCNVLCEA 266
C CS CF L S+++DMY+ + +
Sbjct: 406 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLS 465
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+++FD+ +VA WN +I+GY ++ + +EA+ L + G+ D +TFT L
Sbjct: 466 QRIFDRLRE------KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519
Query: 327 KACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
AC + L FN L +H + +L++ + ++D+ R G + AL L
Sbjct: 520 MACSHAGLVEDGLEYFNQ--MLNLHNI----EPKLEHY--TCVVDMLGRAGRIDDALRLI 571
Query: 380 HRLP-KKDVVAWSGLIMGCTKHG 401
+P D WS L+ C HG
Sbjct: 572 EEMPGDPDSRIWSSLLSSCRIHG 594
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 201/668 (30%), Positives = 325/668 (48%), Gaps = 75/668 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + + K+LH IIK + F NNL+S YA S+
Sbjct: 16 LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIP-------------- 61
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+A ++++ M PN + ++ +L A S G + + +
Sbjct: 62 -----------------YACKVFDQM-----PHPNLYSWNTILSAYSKLGRVSEMEYLFD 99
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML----- 182
+ R D V N+L+ Y CG + + K ++ S N ++++L
Sbjct: 100 AMPRR----DGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASK 155
Query: 183 ----SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+Q+H VK GF + L+DMY K G I +F+ +PE++VV + +
Sbjct: 156 RGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTL 215
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I+G C V R F+ + S W SMI+G+ N
Sbjct: 216 IMGLMRCG--------------RVEDSKRLFFEMRERDSIS-------WTSMITGFTQNG 254
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ +AI + + + +D YTF S L AC ++ QVH I+ + Y+ + V
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQE--GKQVHAYIIRTDYKDNIFV 312
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
S L+D+Y + N+KSA +F ++ K+VV+W+ +++G ++G + A F DM
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + F + SV+ C+ LASL G Q HA + G +L+ +Y KCG I+D
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF + +D V+WT ++ G Q G+A E I F+ M+ LKP+++TF+GVLSAC AGL
Sbjct: 433 LFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGL 492
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VE+ IF SM E+G+ P +HY CM+DL +AG ++A I +MPF PD WA++L
Sbjct: 493 VEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLL 552
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
+C + N + AE L+ P + + YV+LS+VYA G W+ ++++RK + G K
Sbjct: 553 SSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRK 612
Query: 658 KAGMSWIE 665
+ G SWI+
Sbjct: 613 EPGCSWIK 620
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 43/284 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG ++++GK +H II+ +IF + L+ MY ++ A +
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAV 332
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M KN+VSWT M+ Y N A++ ++ M +YG +EP+ F +V+ +C+
Sbjct: 333 FKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG-IEPDDFTLGSVISSCANLAS 391
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG 173
L+ G H R L + N L+ +Y KCGS+ + +LF++ S W A G
Sbjct: 392 LEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSG 451
Query: 174 ---------NVALWNSMLSGGKQ--------VHAFCVKRGFEKEDVTL------------ 204
+ L+ SML+ G + V + C + G ++ +
Sbjct: 452 YAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVP 511
Query: 205 -----TSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
T +ID++ + G I++ N MP D +SW ++ C
Sbjct: 512 IQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSC 555
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 209/690 (30%), Positives = 347/690 (50%), Gaps = 76/690 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRII---KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
L+ C S+++ + LH ++ S+ F NN++SMY+ SL DAH++FD+M +
Sbjct: 286 LKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQ 345
Query: 67 KNIVSWTTMVTAYT--SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ VS+ ++ AY+ S + +A LY M G + P+ +++L+A SL GDL +G
Sbjct: 346 RTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMG-LRPSNMTITSLLQAASLHGDLLIG 404
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
L+H + + D + +LL+MY C L+ A S + ++
Sbjct: 405 LLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSS---------AESVFCDMN-------- 447
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF------NFMPE--------- 229
E+++V SLI YLK +I+ G+ LF F P
Sbjct: 448 -------------ERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILS 494
Query: 230 -----RDVVS----WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+D S +IVG +ALVDMY N A +F + W
Sbjct: 495 ACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKW---- 550
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI---DSYTFTSALKACINLLNFNS 337
++ WNSMISGY NE E+A+ L + +C D YT+ + A F+
Sbjct: 551 --DLVSWNSMISGYFENEDGEKAMNLF--VQLKALCFPKPDDYTYAGIISATGAFPCFS- 605
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+ +HG ++ +G+ VGS L+ +Y + ++AL +F +P KD + W+ +I G
Sbjct: 606 -YGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGY 664
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+K A F +M + +++ +++S VL VC+ LA LR+G+ +H + K G++ E
Sbjct: 665 SKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEM 724
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
SLIDMY K G ++ +F + D+ W ++ G +G +A+ F+E+I+
Sbjct: 725 SVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQ 784
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
L P+++TFL +LSAC H+ LVE+ ++ M GL P +HY CMV LL +A ++
Sbjct: 785 GLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMS-SIGLVPGPKHYSCMVTLLSRAALLEE 843
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
AE++I + P+ D +W ++L AC + N K+ AE++L + ED ++LSN+YA
Sbjct: 844 AEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYA 903
Query: 637 TLGMWDSLSKVRKAGKKL-GEKKAGMSWIE 665
G WD ++++R+ K L EK+ G+SWIE
Sbjct: 904 AAGRWDEVAEIRRNMKGLIMEKEPGLSWIE 933
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 428 VLKVCSCLASLRRGKQVHAFCV---KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+LK C SL+ +Q+HA + K ++I MY +CG ++D +F MP
Sbjct: 285 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 344
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAY--FQEMIQSRLKPNEITFLGVLSACRHAG 537
+R VS+ ++ + A+ + +M L+P+ +T +L A G
Sbjct: 345 QRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHG 399
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 324/654 (49%), Gaps = 55/654 (8%)
Query: 14 GQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G R ++ ++HC I+K L + F N+LL+ YA L A ++FDEM N+ +
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++A ++ RL+ M E +V Y+A++ S +G ++ +
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVS-----YNALITGFSSTGSPARSVQLYRALL 137
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
RE+ T + + + M ASA + AL G VH
Sbjct: 138 REESVRPTRITLSAMIM------------------VASALSDRAL-------GHSVHCQV 172
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
++ GF + L+DMY K G I D +F M + VV + +I G C
Sbjct: 173 LRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC------- 225
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
++ +A+ LF + W +M++G N EA+ + + +
Sbjct: 226 --------KMIEDAKGLFQLMVDR------DSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ ID YTF S L AC L Q+H I + YE + VGS L+D+Y++ ++
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEE--GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F R+ +++++W+ +I+G ++ + A F +M + F + SV+ C
Sbjct: 330 RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LASL G Q H + G + +L+ +Y KCG I+D LF M D VSWT
Sbjct: 390 ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ G Q G+AKE I F++M+ + LKP+ +TF+GVLSAC AGLVE+ F SM+ +
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD 509
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G+ P +HY CM+DL ++G F +AE+ I +MP PD WA++L +C N ++
Sbjct: 510 HGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
AE LL T P++P+ YV+L +++A G W ++ +R+ + + +K+ G SWI+
Sbjct: 570 AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 218/492 (44%), Gaps = 58/492 (11%)
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEID 218
L ++Y+ +SA G+ ++G VH +K + L L+ Y K G +
Sbjct: 8 LCNRYAAILSSAAGDGGRTGVRVAGA--VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLA 65
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+F+ MP+ ++ FT +AL+ ++ ++ + +LF A
Sbjct: 66 RARRVFDEMPDPNL---------------FTRNALLSALAHSRLVPDMERLFASMPERDA 110
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+Y N++I+G+ ++ L + + SA+ + L+ +
Sbjct: 111 VSY------NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS-DRA 163
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK------------- 385
VH ++ G+ VGS L+D+YA++G ++ A +F + K
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223
Query: 386 ------------------DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
D + W+ ++ G T++GL A +FR M ++Q+ S
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C LA+L GKQ+HA+ + +E ++L+DMY KC I A+F+ M R+
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
++SWT +IVG GQN ++EA+ F EM +KP++ T V+S+C + +EE F
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFH 402
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ GL ++ +V L G+ G +DA +L EM F D+ W +++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKA 461
Query: 608 KLVSIIAEQLLA 619
K + E++LA
Sbjct: 462 KETIDLFEKMLA 473
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 33/294 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG ++++GK +H I + ++F G+ L+ MY+ S+ A +F M +NI
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ Y N A+R ++ M + ++P+ F +V+ +C+ L+ G H
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
L + N L+ +Y KCGS+ +LFD+ S + + W ++++G Q
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS------FHDQVSWTALVTGYAQ 457
Query: 188 -------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ F + G + + VT ++ + G ++ G F+ M ++D GI
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM-QKD----HGI 512
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ +C ++D+YS EA + Q + A+G W +++S
Sbjct: 513 VPIDDHYTC-----MIDLYSRSGRFKEAEEFIKQMPH-SPDAFG----WATLLS 556
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 325/683 (47%), Gaps = 100/683 (14%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+HCR+IK GL ++ NNL+++Y+ A KLFDEM + SW T+++AY+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 85 PNWAIRLYNHMLEYGSVEPNGFM--YSAV---LKACSLSGDLDLGRLIHERITREKLEYD 139
+ ++ + + SV + Y + KA + GD+ +E +E
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM----------VKEGIEPT 145
Query: 140 TVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
+ +L +VA M +G K+VH+F VK G
Sbjct: 146 QFTLTNVL-------------------------ASVAATRCMETG-KKVHSFIVKLGLRG 179
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
SL++MY KCG+ +F+ M RD+ SW +A++ ++
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW---------------NAMIALHMQ 224
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCID 318
+ A F+Q A ++ WNSMISG+ + A+ + S + S + D
Sbjct: 225 VGQMDLAMAQFEQM------AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+T S L AC NL Q+H IVT+G+++ IV + LI +Y+R G V++A L
Sbjct: 279 RFTLASVLSACANLEKLC--IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 379 ---------------------------------FHRLPKKDVVAWSGLIMGCTKHGLNSL 405
F L +DVVAW+ +I+G +HG
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A LFR M+ Q N + ++++L V S LASL GKQ+H VK G +LI
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 466 MYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY K G I F + ERD VSWT +I+ Q+G A+EA+ F+ M+ L+P+ I
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
T++GV SAC HAGLV + F MK + P L HY CMVDL G+AG +A++ I +
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
MP +PD W S+L AC H N L + AE+LL PE+ Y L+N+Y+ G W+
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEA 636
Query: 645 SKVRKAGKK-LGEKKAGMSWIEV 666
+K+RK+ K +K+ G SWIEV
Sbjct: 637 AKIRKSMKDGRVKKEQGFSWIEV 659
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 218/520 (41%), Gaps = 124/520 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA------------------DFTSLND-- 56
R ++ GK +H I+K GL ++ N+LL+MYA D +S N
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 57 -----------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG 105
A F++MA ++IV+W +M++ + A+ +++ ML + P+
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
F ++VL AC+ L +G+ IH I + +++N L+ MY +CG + R+L +Q
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
G K + GF T+L+D Y+K G+++ +
Sbjct: 340 -------------------RGTKDLKI----EGF-------TALLDGYIKLGDMNQAKNI 369
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F + +RDVV+WT +IVG ++Q+ S+ +
Sbjct: 370 FVSLKDRDVVAWTAMIVG----------------------------YEQHGSYGEA---- 397
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ L+ SM+ G G +SYT A + + Q+
Sbjct: 398 INLFRSMVGG--------------------GQRPNSYTL--AAMLSVASSLASLSHGKQI 435
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGL 402
HG V SG V + LI +YA+ GN+ SA F + ++D V+W+ +I+ +HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A LF M+ + V C+ + +G+Q F + + +K TL+
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSH 553
Query: 463 ---LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D++ + G + + + MP E DVV+W ++ C
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 69/282 (24%)
Query: 321 TFTSALKACINLLN-----FNSRFALQ-VHGLIVTSGYELDYIVGSNLIDLYARL----- 369
+ ++ L+ C NLL N RF Q VH ++ SG + +NL+++Y++
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 370 --------------------------GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
G++ S E F +LP++D V+W+ +I+G G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A + DM+ + QF +++VL + + GK+VH+F VK G SL
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 464 IDMYLKC-------------------------------GEIDDGLALFKFMPERDVVSWT 492
++MY KC G++D +A F+ M ERD+V+W
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSAC 533
+I G Q G A+ F +M++ S L P+ T VLSAC
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 271/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K GF+ + TSLI MY++ ++D +F+ RDVVS+T +I G
Sbjct: 83 GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG--- 139
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+KLFD+ +V WN+MISGY +EA+
Sbjct: 140 ------------YASRGDIRSAQKLFDEI------PVKDVVSWNAMISGYAETGCYKEAL 181
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + D T+ + L AC + + + QVH + G++ + + + LID
Sbjct: 182 ELFEEMMKMNVRPDESTYVTVLSACAH--SGSIELGRQVHSWVDDHGFDSNLKIVNALID 239
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ SVL C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M + + SW +I G +GRA + F M + ++P++ITF+G+LSAC H+G+++
Sbjct: 360 MLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGM 661
H N +L A+ L+ PE+PS Y++LSN+YA+ G W+ ++++R K +K G
Sbjct: 480 MHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGC 539
Query: 662 SWIEVSS 668
S IEV S
Sbjct: 540 SSIEVDS 546
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 41/379 (10%)
Query: 263 LCEARKLFDQYSSWAASAY-----GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
LC FD +A S + N +WN+MI G+ L+ ++TL + S G+
Sbjct: 4 LCVPSPHFDGLP-YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLP 62
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL------------ 365
+SYTF LK+C F Q+HG ++ G++LD V ++LI +
Sbjct: 63 NSYTFPFLLKSCAKSKTFTE--GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120
Query: 366 -------------------YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
YA G+++SA +LF +P KDVV+W+ +I G + G A
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF +M+ N ++ +VL C+ S+ G+QVH++ GF+ + +LID+
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDL 240
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCGE++ LF+ + +DV+SW +I G KEA+ FQEM++S PN++T
Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300
Query: 527 LGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L VL AC H G ++ W K G+ ++D+ + G + A Q+ M
Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
Query: 586 PFKPDKTIWASMLKACETH 604
K + W +M+ H
Sbjct: 361 LHKSLSS-WNAMIFGFAMH 378
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 204/454 (44%), Gaps = 78/454 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ +G+ +H +++K G D++ +L+SMY L DA+K+FD + +++
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ Y VL AC+ SG ++LGR +H + + + ++N L+D+Y KCG +
Sbjct: 191 -NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF S Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 250 ACGLFQGLS------YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSV 303
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A
Sbjct: 304 LPACAHLGAIDIGRWIHVYIDKR--------LKGVTNASSLRTS-LIDMYAKCGDIEAAH 354
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + + + L S + G+ D TF L
Sbjct: 355 QVFN------SMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + DY + L IDL G K A E+ +
Sbjct: 409 AC-------SHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINT 461
Query: 382 LP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ + D V W L+ C HG LA +++I
Sbjct: 462 MEMEPDGVIWCSLLKACKMHGNVELAESFAQNLI 495
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 130/611 (21%), Positives = 235/611 (38%), Gaps = 173/611 (28%)
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
F L A +F+ + N + W TM+ + + P ++ LY M+ G + PN + +
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLL-PNSYTFPF 69
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWA 168
+LK+C+ S G+ IH ++ + + D + +L+ MYV+ L K+FD+ S+
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129
Query: 169 ASAY-------------------------GNVALWNSMLSG------------------- 184
+Y +V WN+M+SG
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 185 -------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
G+QVH++ GF+ + +LID+Y KCGE++
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF + +DV+SW +I G Y++ N+
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGG---------------YTHMNLY---------------- 278
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+EA+ L + SG + T S L AC +L +
Sbjct: 279 ---------------------KEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGR 317
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+ V+ G + ++LID+YA+ G++++A ++F+ + K + +W+ +I G
Sbjct: 318 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
HG ++ LF M K G E +DIT
Sbjct: 378 HGRADASFDLFSRM-----------------------------------RKIGIEPDDIT 402
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC-----GQNGRAKEAIAYFQEM 514
L+ G +D G +F+ M + ++ GC G +G KEA +EM
Sbjct: 403 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA----EEM 458
Query: 515 IQS-RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV-DLLGQA 572
I + ++P+ + + +L AC+ G VE A + ++ +EP Y ++ ++ A
Sbjct: 459 INTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL---IKIEPENPSSYILLSNIYASA 515
Query: 573 GCFDDAEQLIA 583
G ++D ++ A
Sbjct: 516 GRWEDVARIRA 526
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 148/331 (44%), Gaps = 38/331 (11%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C SI+ G+ +H + +G ++ N L+ +Y+ + A LF ++
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+++SW T++ YT A+ L+ ML G PN +VL AC+ G +D+GR
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSVLPACAHLGAIDIGRW 318
Query: 127 IHERITR--EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH I + + + + L +L+DMY KCG + + + + + +++ WN+M+ G
Sbjct: 319 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA----HQVFNSMLHKSLSSWNAMIFG 374
Query: 185 ----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G+ +F + K G E +D+T L+ G +D G +F M + ++
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AASAYGNV 284
GC ++D+ + + EA ++ + W A +GNV
Sbjct: 435 KLEHYGC----------MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV 484
Query: 285 ALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
L S + + +N + LLS+I++S
Sbjct: 485 ELAESFAQNLIKIEPENPSSYILLSNIYASA 515
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 330/663 (49%), Gaps = 42/663 (6%)
Query: 19 IKQGKSLHC-RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++G +H ++ +++ + N ++S + F L+ A +LFD M + VSWT ++
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI---HERITRE 134
Y + + A RLY M G +EP+ Y ++ S G+L+ +I H + +
Sbjct: 114 GYLQSNQSKEAFRLYADM-RRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 135 KLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAA-------SAYGNVALWNSMLSGG 185
EY+ ++ N+L+D Y K C L +LF N + Y N L +
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++H G + D T +L+ + + G + F+ + + V W
Sbjct: 230 LELH----NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFV-W---------- 274
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F +AL+D YS + + E KLF + +Y N +I+ Y N Q +E+
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISY------NVVITSYAWNGQFKESFD 328
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + + F + L + LN R Q+H +T G + V + L+D+
Sbjct: 329 LFRKLQFTRFDRRQFPFATLLSIATSSLNL--RMGRQIHCQAITVGANFESRVENALVDM 386
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
YA+ K A ++F + K V W+ +I + G + +F DM + +Q
Sbjct: 387 YAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+S+L+ C+ LAS+ G+Q+H+ ++ GF + ++L+D Y KCG + D + F MPE
Sbjct: 447 ASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+ VSW +I QNG + FQ+MIQS KP+ ++FL VLSAC H G VEEA
Sbjct: 507 RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM Y + P EHY MVD+L + G FD+AE+L+ EMPF+P + +W+S+L +C H
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHK 626
Query: 606 NTKLVSIIAEQLLATSP-EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSW 663
N +L A++L D + Y+ +SN+YA G WD+++KV+KA + G +K SW
Sbjct: 627 NHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSW 686
Query: 664 IEV 666
+E+
Sbjct: 687 VEI 689
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ G+ +HC+ I G + + N L+ MYA +A K+FD +A K+ V WT M++
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY + I +++ M G V + ++++L+AC+ + LGR +H + R
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTG-VPADQATFASILRACANLASISLGRQLHSLLIRSGFM 475
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHA 190
+ + LLD Y KCG +T D ++ N WN+++S Q +++
Sbjct: 476 SNVYSGSALLDTYAKCGCMT----DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531
Query: 191 F--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
F ++ G++ + V+ S++ CG +++ L FN M +
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C SI G+ LH +I+ G ++++G+ LL YA + DA K F EM +N
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
VSW +++AY N + + + M++ G +P+ + +VL ACS G
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCG 558
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 414 INSNQDVNQFIISSVLKVCSCLAS------LRRGKQVHAFCV-KRGFEKEDITLTSLIDM 466
+NSN ++ I+ + +C ++ L RG VHA V + K I+L +I
Sbjct: 24 LNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+LK G++ LF M ER VSWT +I G Q+ ++KEA + +M + ++P+ +T
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ +LS I T + + G E +L +VD + C A QL M
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHV-IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHML 202
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
K T + M N + + + E L S PS + + + A +G+ D+
Sbjct: 203 NKDTVTFNSLMTGYSNEGLNEEAIELFLE--LHNSGIKPSDFTFAALLSAAVGLDDT 257
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 335/677 (49%), Gaps = 74/677 (10%)
Query: 19 IKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
I+ G +LH K G ++ G++ +S+Y+ +NDA K+FDE+ +++V+WT +V
Sbjct: 125 IRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVI 184
Query: 78 AYTSNKRPNWAIRLYNHMLEYG--SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
Y N + + M G S +PN AC GDL GR +H + +
Sbjct: 185 GYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNG 244
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
+ + +++L MY KCG + R+ + +S
Sbjct: 245 IGCLLDIQSSVLSMYCKCG-VPREAYQSFSEV---------------------------- 275
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC------------- 242
K+ ++ TS+I +Y + G + D + F M E V G+++GC
Sbjct: 276 -INKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCP-DGMVIGCILSGFGNSVDVYG 333
Query: 243 ------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ ++L+ MY +L A +LF + + G++ WN M
Sbjct: 334 GKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-------SQGSIEYWNFM 386
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I GY +N + I L + G+ +S SA+ +C L N +H ++
Sbjct: 387 IVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEIN--LGRSIHCNVIKG 444
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ V ++LI++Y + + + +F+R ++DV+ W+ LI A LF
Sbjct: 445 FVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLF 503
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
MI +Q+ N + VL CS LA L +G+++H + ++GF+ T+L+DMY KC
Sbjct: 504 DIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKC 563
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G+++ +F M E+DV+ W +I G G NG A+ AI F M +S +KPNEITFL +L
Sbjct: 564 GQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLL 623
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC HAGLVEE +F M+ Y ++P+L+HY CMVDLLG++ ++AE+L+ MP PD
Sbjct: 624 SACAHAGLVEEGKNVFAKMQ-SYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPD 682
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W ++L AC+THN ++ I + + + PE+ Y+M++N+Y+++G WD VR+
Sbjct: 683 GGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRT 742
Query: 651 GK---KLGEKKAGMSWI 664
K +G KKAG S +
Sbjct: 743 MKDRCSMG-KKAGWSMV 758
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/550 (24%), Positives = 248/550 (45%), Gaps = 41/550 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + G+ LH ++K G+ + +++LSMY +A++ F E+ K+++SW
Sbjct: 224 CGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSW 283
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+M+ Y + +R + MLE V P+G + +L S D+ G+ H I
Sbjct: 284 TSMIRVYARFGMMSDCVRFFWEMLE-NQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLII 342
Query: 133 REKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
R D ++ N+LL MY K G S +LF + + G++ WN M+ G GK
Sbjct: 343 RRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-------SQGSIEYWNFMIVGYGRIGK 395
Query: 187 QVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
V + R G E V + S I + GEI+ G ++ +I G
Sbjct: 396 NVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIH-----------CNVIKG 444
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ + ++L++MY C+ + + ++F++ +V LWN++IS ++ + E
Sbjct: 445 FVDETISVTNSLIEMYGKCDKMNVSWRIFNRSER-------DVILWNALISAHIHVKHYE 497
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EAI+L + ++ T L AC +L ++H I G++L+ +G+
Sbjct: 498 EAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEK--GERLHRYINEKGFKLNLPLGTA 555
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ G ++ + E+F + +KDV+ W+ +I G +G A +F M SN N
Sbjct: 556 LVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPN 615
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ S+L C+ + GK V A + T ++D+ + +++ L
Sbjct: 616 EITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVL 675
Query: 482 FMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MP D W ++ C + + + I + I S N+ ++ V + G +
Sbjct: 676 SMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSE-PENDGYYIMVANMYSSIGRWD 734
Query: 541 EAWTIFTSMK 550
EA + +MK
Sbjct: 735 EAENVRRTMK 744
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 199/480 (41%), Gaps = 73/480 (15%)
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
M+ G +HA K GF E+ + +S + +Y +C E++D + +F+ +P RDVV+WT ++
Sbjct: 124 MIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 183
Query: 240 VG---------CFEC------------------------SCFTLSALV------------ 254
+G EC +C L LV
Sbjct: 184 IGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKN 243
Query: 255 -------------DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
MY C V EA Y S++ ++ W SMI Y
Sbjct: 244 GIGCLLDIQSSVLSMYCKCGVPREA------YQSFSEVINKDLLSWTSMIRVYARFGMMS 297
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+ + + + +C D L N ++ A HGLI+ Y D +V ++
Sbjct: 298 DCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAF--HGLIIRRHYAPDEMVDNS 355
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ +Y + G + A LF R + + W+ +I+G + G N LFR+M
Sbjct: 356 LLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSE 414
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALF 480
I S + C L + G+ +H +K GF E I++T SLI+MY KC +++ +F
Sbjct: 415 SVGIVSAIASCGQLGEINLGRSIHCNVIK-GFVDETISVTNSLIEMYGKCDKMNVSWRIF 473
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
ERDV+ W +I +EAI+ F MI PN T + VLSAC H +E
Sbjct: 474 N-RSERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLE 532
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + + E G + +L +VD+ + G + + ++ M + D W +M+
Sbjct: 533 KGERLHRYIN-EKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMISG 590
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
L H + VT+G + + + LI LY L + S+ LFH LP KD W+ +
Sbjct: 28 LPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSR 87
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
L + M + N N F V + +R G +HA K GF E+ +
Sbjct: 88 SLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAV 147
Query: 461 -TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ--- 516
+S + +Y +C E++D + +F +P RDVV+WT +++G QNG ++ + EM +
Sbjct: 148 GSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGD 207
Query: 517 SRLKPNEITFLGVLSACRHAG 537
KPN T G AC + G
Sbjct: 208 DSQKPNARTLEGGFLACGNLG 228
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV A+ CGQ I G+S+HC +IK + + I N+L+ MY +N + ++F+ +
Sbjct: 418 IVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-S 476
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++ W +++A+ K AI L++ M+ PN VL ACS L+ G
Sbjct: 477 ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQ-NPNTATLVVVLSACSHLAFLEKGE 535
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H I + + + L L+DMY KCG L +R++FD +V WN+M+S
Sbjct: 536 RLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMME------KDVICWNAMIS 589
Query: 184 G---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G ++ + + ++T SL+ G +++G +F M V
Sbjct: 590 GYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSV 647
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C +++G+ LH I + G ++ G L+ MYA L + ++FD M
Sbjct: 518 LVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMM 577
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++ W M++ Y N AI ++N ++E +V+PN + ++L AC+ +G ++ G+
Sbjct: 578 EKDVICWNAMISGYGMNGYAESAIEIFN-LMEESNVKPNEITFLSLLSACAHAGLVEEGK 636
Query: 126 LIHERI----TREKLEYDTVLMNTL 146
+ ++ + L++ T +++ L
Sbjct: 637 NVFAKMQSYSVKPNLKHYTCMVDLL 661
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 346/694 (49%), Gaps = 84/694 (12%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K++H I K L++DI N L+ Y + +A+K+F ++ N+VS+T M++ + +
Sbjct: 92 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
R A+ ++ M G +E N F + A+L C DL+LG +H + + T +
Sbjct: 150 NRERQAMEIFFRMRSSG-IELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFV 208
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------------- 184
N L+ +Y KCG L +LFD+ + ++A WN+++S
Sbjct: 209 SNALMGLYGKCGYLDSVLQLFDEM------PHRDIASWNTVISSVVKEMMYERAFELFRD 262
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
G+++HA +K GFE + +LI Y KCG
Sbjct: 263 MRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGS 322
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
I +ALF M RDV++WT +I E F L+ L A ++FD+ +
Sbjct: 323 IKHVVALFEKMRVRDVITWTEMITAYME---FGLTDL------------ALEVFDKMPAR 367
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ +Y N+++SG+ N + +A+ + G+ + +T T L AC L+
Sbjct: 368 NSISY------NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLM--E 419
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL--FHRLPKKDVVAWSGLI 394
++ + Q+HG I+ G+ + + + L+D+ R G + A ++ + + W+ +I
Sbjct: 420 AKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 479
Query: 395 MGCTKHGLNSLAYLLF-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
G ++ A LF + + V++ ++VL VC LA GKQ+H +K GF
Sbjct: 480 CGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGF 539
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ S+I MY KC +DD + +F MP D+VSW G+I G + + EA++ + +
Sbjct: 540 LSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSK 599
Query: 514 MIQSRLKPNEITFLGVLSACRH--AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M ++ +KP+ +TF+ ++SA RH + LV+ +F SMK Y ++P +EHY +V +LG
Sbjct: 600 MEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGY 659
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G ++AE++I +MP +P+ ++W ++L AC H+NT + A+ LLA P DPS Y+++
Sbjct: 660 WGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILV 719
Query: 632 SNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
SN+Y+ G W VR+ + G K G SWI
Sbjct: 720 SNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 753
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 187/426 (43%), Gaps = 45/426 (10%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C + ++ G LH +IK G F N L+ +Y L+ +LFDEM
Sbjct: 175 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 234
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++I SW T++++ A L+ M + F S +L A + +GR
Sbjct: 235 RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGRE 293
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS- 183
IH + + E + ++N L+ Y KCGS+ LF++ +V W M++
Sbjct: 294 IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMR------VRDVITWTEMITA 347
Query: 184 ----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSW 235
G + + + ++ +++ + + GE LA F M E V +
Sbjct: 348 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 407
Query: 236 TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
TG++ C F + +AL+DM + C + +A+K+ S
Sbjct: 408 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKM----FS 463
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG-MCIDSYTFTSALKACINLLN 334
+ + +W SMI GY N Q EEAI+L G M +D T+ L C L
Sbjct: 464 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVC-GTLA 522
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
F+ Q+H + SG+ D VG+++I +Y++ N+ A+++F+ +P D+V+W+GLI
Sbjct: 523 FH-EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 581
Query: 395 MGCTKH 400
G H
Sbjct: 582 AGHLLH 587
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + GK +HC +K G D+ GN++++MY+ ++++DA K+F+ M +IVSW
Sbjct: 518 CGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSW 577
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
++ + +++ + A+ +++ M E ++P+ + ++ A
Sbjct: 578 NGLIAGHLLHRQGDEALSVWSKM-EKAGIKPDTVTFVLIISA 618
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 277/515 (53%), Gaps = 32/515 (6%)
Query: 159 KLFDQYSNWAASAYGN---VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+L + AS Y N V L GK+VH GF V ++ MY KCG
Sbjct: 77 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ D +F+ MPERDV SW + +V+ Y+ +L EAR LFD+
Sbjct: 137 SLVDARKVFDEMPERDVCSW---------------NVMVNGYAEVGLLEEARNLFDEMPE 181
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAI---TLLSHIHSSGMCIDSYTFTSALKACINL 332
+ + W +M++GYV +Q EEA+ +L+ + +S I + + A A I
Sbjct: 182 RDSYS------WTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKC 235
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+ R ++HG IV +G + D ++ S+L+D+Y + G + A +F ++ KDVV+W+
Sbjct: 236 I----RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTS 291
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I K + LF ++I S + N++ S VL C+ L + G+QVH + + G
Sbjct: 292 MIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVG 351
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F+ +SLIDMY KCG I+ + P+ D+VS T +I G QNG+ EA+ YF
Sbjct: 352 FDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFD 411
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+++S KP+ +TF+ VLSAC HAGLVE+ F S+ ++ L +HY C+VDLL ++
Sbjct: 412 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARS 471
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G F+ + +++EMP KP K +WAS+L C T+ N L A++L PE+P YV ++
Sbjct: 472 GRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 531
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
N+YA G W+ K+RK +++G KK G SW E+
Sbjct: 532 NIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEI 566
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 212/495 (42%), Gaps = 73/495 (14%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P Y +++ CS + L+ G+ +HE I V+ N +L MY KCGSL RK
Sbjct: 84 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARK 143
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
+FD+ +V WN M++G +V R E++ + T+++ Y+K
Sbjct: 144 VFDEMPE------RDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKK 197
Query: 215 GEIDDGLALFNFM---PERDVVSWTG----------------------IIVGCFECSCFT 249
+ ++ L L++ M P +T I+ +
Sbjct: 198 DQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVL 257
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
S+L+DMY C + EAR +FD+ +V W SMI Y + + E +L S
Sbjct: 258 WSSLMDMYGKCGCIDEARNIFDKIID------KDVVSWTSMIDRYFKSSRWREGFSLFSE 311
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S + YTF+ L AC +L QVHG + G++ S+LID+Y +
Sbjct: 312 LIGSCERPNEYTFSGVLNACADLT--TEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKC 369
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
GN++SA + PK D+V+ + LI G ++G A F ++ S + +VL
Sbjct: 370 GNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVL 429
Query: 430 KVCSCLASLRRGKQVHAFCVKRGF-------EKEDITLTS-----LIDMYLKCGEIDDGL 477
C+ HA V++G EK D+T TS L+D+ + G +
Sbjct: 430 SACT-----------HAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLK 478
Query: 478 ALFKFMPERDV-VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRH 535
++ MP + W ++ GC G A QE+ +++P N +T++ + +
Sbjct: 479 SVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF--KIEPENPVTYVTMANIYAA 536
Query: 536 AGLVEEAWTIFTSMK 550
AG EE + M+
Sbjct: 537 AGKWEEEGKMRKRMQ 551
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 176/484 (36%), Gaps = 161/484 (33%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C Q R++++GK +H I G I N +L MYA SL DA K+FDEM +++ SW
Sbjct: 97 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSW 156
Query: 73 -------------------------------TTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
T MVT Y +P A+ LY+ M +
Sbjct: 157 NVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 216
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+PN F S+ + A + + G+ IH I R L+ D VL ++L+DMY KCG + R
Sbjct: 217 KPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 276
Query: 160 LFDQYSNWAASAYGNVALWNSML-------------------------------SG---- 184
+FD+ + +V W SM+ SG
Sbjct: 277 IFDKIID------KDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNA 330
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G+QVH + + GF+ +SLIDMY KCG I+ + + P+ D+VS
Sbjct: 331 CADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSL 390
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T +I G Y
Sbjct: 391 TSLIGG----------------------------------------------------YA 398
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N + +EA+ + SG D TF + L AC H +V G E
Sbjct: 399 QNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSAC-------------THAGLVEKGLEFF 445
Query: 356 YIVGSN------------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGL 402
Y + L+DL AR G + + +P K W+ ++ GC+ +G
Sbjct: 446 YSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGN 505
Query: 403 NSLA 406
LA
Sbjct: 506 IDLA 509
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 197/671 (29%), Positives = 345/671 (51%), Gaps = 62/671 (9%)
Query: 19 IKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKNIVSWTTMV 76
++ G++LH R+++ L +D N+LL++Y+ ++ A +FD M ++IVSWT M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N ++ L MLE G + PN + A AC +L K+
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLL-PNAYTLCAAAHAC-FPHELYCLVGGVVLGLVHKM 181
Query: 137 EY---DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
D + + L+DM + G L RK+FD V +W ++S + V
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIE------KTVVVWTLLIS--RYVQGE 233
Query: 192 CVKR-----------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
C + GFE + T++S+I + G + GL L + + S
Sbjct: 234 CAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLAS-----D 288
Query: 241 GCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
C C LVDMY+ N+ + A K+F++ +V W ++ISGYV +
Sbjct: 289 ACVSC------GLVDMYAKSNIGQAMDYANKVFERMPK------NDVISWTALISGYVQS 336
Query: 298 E-QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
Q + + L + + + + T++S LK+C ++ + +S QVH ++ S +
Sbjct: 337 GVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDS--GRQVHAHVIKSNQASAH 394
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VG+ L+ +YA G ++ A +F++L ++ ++ C G + + L ++
Sbjct: 395 TVGNALVSMYAESGCMEEARRVFNQLYERSMIP-------CITEGRD---FPLDHRIVRM 444
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ +S++ + + L +G+Q+HA +K GF + SL+ MY +CG ++D
Sbjct: 445 DVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
F + +R+V+SWT +I G ++G A+ A++ F +MI + +KPN++T++ VLSAC H
Sbjct: 505 CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLV E F SM+ ++GL P +EHY CMVDLL ++G +A + I EMP K D +W +
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKT 624
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
+L AC +H+N ++ I A+ ++ P DP+ YV+LSN+YA G+WD ++++R A +
Sbjct: 625 LLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684
Query: 656 EKKAGMSWIEV 666
K+ G+SW+EV
Sbjct: 685 NKETGLSWMEV 695
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 210/685 (30%), Positives = 309/685 (45%), Gaps = 117/685 (17%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ Q + H I+K GL D LLS YA+ DA + D +
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVP------------ 75
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
EPN F +S ++ A S K
Sbjct: 76 ------------------------EPNVFSFSTLIYAFS------------------KFH 93
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
++T M LTR L ++ L S L +QVH GF
Sbjct: 94 QFHHALSTFSQM------LTRGLMPDNRVLPSAVKACAGL--SALKPARQVHGIASVSGF 145
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ + +SL+ MY+KC +I D +F+ M E DVVSW SALV Y
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSW---------------SALVAAY 190
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+ + EA++LF + + N+ WN MI+G+ + EA+ + +H G
Sbjct: 191 ARQGCVDEAKRLFSEMGD--SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP 248
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY----------- 366
D T +S L A +L + + +HG ++ G D V S LID+Y
Sbjct: 249 DGTTISSVLPAVGDLEDL--VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQ 306
Query: 367 --------------------ARLGNVKSALELFHRLPKK----DVVAWSGLIMGCTKHGL 402
+R G V+S+L LF +L + +VV+W+ +I C+++G
Sbjct: 307 VFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR 366
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ A LFR+M + N I +L C +A+L GK H F ++RG + ++
Sbjct: 367 DMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LIDMY KCG I F +P +++V W +I G +G+AKEA+ F M +S KP+
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
I+F VLSAC +GL EE F SM +YG+E +EHY CMV LL +AG + A +I
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MP PD +W ++L +C HNN L + AE+L P +P Y++LSN+YA+ GMW+
Sbjct: 547 RRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWN 606
Query: 643 SLSKVRKAGKKLG-EKKAGMSWIEV 666
+++VR K G K G SWIEV
Sbjct: 607 EVNRVRDMMKNKGLRKNPGCSWIEV 631
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 199/475 (41%), Gaps = 83/475 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R + A++ C ++K + +H G D F ++L+ MY + DAH++F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG---------------------- 99
D M ++VSW+ +V AY + A RL++ M + G
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 100 ------------SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
EP+G S+VL A DL +G LIH + ++ L D + + L+
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 148 DMYVKCG--SLTRKLFDQYSNW---AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV 202
DMY KC S ++FDQ + + +A+ N + ++ +G E V
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGCFECS---------CFT 249
+ TS+I + G + L LF M + + V+ ++ C + CF+
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412
Query: 250 L-----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
L SAL+DMY+ C + +R FD + N+ WN++I+GY ++
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPT------KNLVCWNAVIAGYAMHG 466
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI----VTSGYEL 354
+ +EA+ + + SG D +FT L AC S+ L G ++S Y +
Sbjct: 467 KAKEAMEIFDLMQRSGQKPDIISFTCVLSAC-------SQSGLTEEGSYYFNSMSSKYGI 519
Query: 355 DYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ V + ++ L +R G ++ A + R+P D W L+ C H SL
Sbjct: 520 EARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 11/234 (4%)
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C+N + Q H I+ +G D + + L+ YA A + +P+ +V
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 389 AWSGLIMGCTK-----HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
++S LI +K H L++ + +L R ++ N+ ++ S +K C+ L++L+ +Q
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNR-----VLPSAVKACAGLSALKPARQ 135
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
VH GF+ + +SL+ MY+KC +I D +F M E DVVSW+ ++ + G
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
EA F EM S ++PN I++ G+++ H+GL EA +F M G EP
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEP 248
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 327/673 (48%), Gaps = 72/673 (10%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
H ++K G + N LL+ Y+ + L A ++FDE+ R++ VSW ++ A+ ++
Sbjct: 14 HASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A RL M G + N F + L++ +++ +G + + L +
Sbjct: 73 AHPEAWRLLRAMHAQG-LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAA 131
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
+ LLD+Y KCG + R++FD N WN++++G
Sbjct: 132 SALLDVYAKCGRVRDARQVFDGMPER------NTVSWNALIAG----------------- 168
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCFECSCF--------- 248
Y + G++ L LF M D ++ ++ SCF
Sbjct: 169 ---------YTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQLHGKI 219
Query: 249 ----------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
L+A + YS C L ++R++FD ++ WN+M+ Y N
Sbjct: 220 VKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-----IRDLISWNAMLGAYTHNG 274
Query: 299 QNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
++EA+ + SG+ D Y+FTS + +C + + +HGL++ S E
Sbjct: 275 MDDEAMKFFVRMMQESGVHPDMYSFTSIISSC-SEHGHDDHQGRVIHGLVIKSALEGVTP 333
Query: 358 VGSNLIDLYARLGN---VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V + LI +Y R ++ A + F+ L KD V+W+ ++ G ++HGL++ A FR M
Sbjct: 334 VCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMC 393
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ N +++ S+ L+ S LA L+ GKQ+H + GF D +SLI MY K G ID
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIID 453
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D F+ + V W +I G Q+G+A+ F EM+Q + + ITF+G++++C
Sbjct: 454 DARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAGLV+E I +M+ +YG+ +EHY C VDL G+AG D A++LI MPF+PD +W
Sbjct: 514 HAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H N +L S +A L P S YV+LS++Y+ LGMW + V++ KK
Sbjct: 574 MTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKR 633
Query: 655 G-EKKAGMSWIEV 666
G K G S IEV
Sbjct: 634 GLSKVPGWSLIEV 646
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 223/513 (43%), Gaps = 36/513 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR R G L +K GL+ ++F + LL +YA + DA ++FD M +N
Sbjct: 99 ALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERN 158
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ YT + A+ L+ M G V P+ ++++L A + +L H
Sbjct: 159 TVSWNALIAGYTESGDMASALELFLEMEREGLV-PDEATFASLLTAVEGPSCFLMHQL-H 216
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+I + ++N + Y +CGSL +R++FD + ++ WN+ML
Sbjct: 217 GKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-----IRDLISWNAMLGAYT 271
Query: 185 ----GKQVHAFCVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ F V+ G + + TS+I + G D + + +
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL--------- 322
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+I E +AL+ MY+ N C + D Y + + + WNSM++GY
Sbjct: 323 -VIKSALEGVTPVCNALIAMYTRYNENC---MMEDAYKCFNSLVLKDTVSWNSMLTGYSQ 378
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ + +A+ + S + D Y F++AL++ L + Q+HGL++ SG+ +
Sbjct: 379 HGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVL--QLGKQIHGLVIHSGFASND 436
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V S+LI +Y++ G + A + F K V W+ +I G +HG +LF +M+
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ CS + G ++ + K G +D+Y + G++D
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
L MP E D + W ++ C +G + A
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLG--NVKSALELFHRLPKKDVVAWSGLIMGC 397
A + H ++ SG+ + L+ Y+R + +A +F +P++D V+W+ L+
Sbjct: 10 AARSHASLLKSGFAAP-TPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAH 68
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
G + A+ L R M N F + S L+ + G Q+ + +K G
Sbjct: 69 AASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNV 128
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+D+Y KCG + D +F MPER+ VSW +I G ++G A+ F EM +
Sbjct: 129 FAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMERE 188
Query: 518 RLKPNEITFLGVLSA 532
L P+E TF +L+A
Sbjct: 189 GLVPDEATFASLLTA 203
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 281/554 (50%), Gaps = 72/554 (12%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
S L GG Q+H K GF + + +LIDMY KCGE+D +F M +R+VVSWT +
Sbjct: 230 GSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTAL 289
Query: 239 IV---------GCF-----------------------ECSCFT----------------- 249
+V GC + C T
Sbjct: 290 MVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTG 349
Query: 250 -------LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
S+LV +YS + +AR++FD A +A WN+MISGY +
Sbjct: 350 YEEHYVVASSLVLLYSKGGRIGDARRVFD-----CAGLGRGLATWNAMISGYAHAGHGRD 404
Query: 303 AITLLSHI------HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-- 354
A+ + + H D +TF S LKAC L R QVH + SG+
Sbjct: 405 ALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGL--GAPREGAQVHAAMAASGFSTAS 462
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ I+ L+D+Y + G + A+++F RL +K+ + W+ +++G + G A LFR
Sbjct: 463 NAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFW 522
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S + ++SS++ V + A + +G+QVH + VK + S++DMYLKCG D
Sbjct: 523 RSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPD 582
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ +F+ +P R+VVSWT +I G G++G +EA+A F+EM ++P+E+T+L +LSAC
Sbjct: 583 EAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACS 642
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAGLV+E F+ ++ + + P EHY CMVDLLG+AG +A LI MP +P +W
Sbjct: 643 HAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVW 702
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H + + + LLA ++P YV LSNV+A G W KVR A ++
Sbjct: 703 QTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRR 762
Query: 655 G-EKKAGMSWIEVS 667
G +K+ G SW+E+
Sbjct: 763 GLKKQGGCSWVEIG 776
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 225/559 (40%), Gaps = 124/559 (22%)
Query: 1 MDLRR-IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
M+ R+ I + LR + S++ G LH + K G D GNNL+ MYA L+ A +
Sbjct: 214 MERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGE 273
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F M +N+VSWT ++ + + +RL M PN + SA LKAC ++
Sbjct: 274 VFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTE 333
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+ G IH R E V+ ++L+ +Y K G + R++FD A +A
Sbjct: 334 DMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFD-----CAGLGRGLAT 388
Query: 178 WNSMLSG--------------------------------------------------GKQ 187
WN+M+SG G Q
Sbjct: 389 WNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQ 448
Query: 188 VHAFCVKRGFEKED--VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
VHA GF + +L+DMY+KCG + + +F + ++ + WT ++VG
Sbjct: 449 VHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVG---- 504
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI---SGYVLNEQNEE 302
++ + EA +LF ++ W + A + + +S++ + + L EQ
Sbjct: 505 -----------HAQEGQVMEALELFRRF--WRSGARADAHVLSSIVGVLADFALVEQGR- 550
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
QVH V S D G+++
Sbjct: 551 ---------------------------------------QVHCYGVKSPAGTDVSAGNSI 571
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+Y + G A +F +P ++VV+W+ +I G KHGL A +F +M + ++
Sbjct: 572 VDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDE 631
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRG--FEKEDITLTSLIDMYLKCGEIDDGLALF 480
++L CS A L + + C++R + ++D+ + GE+ + L
Sbjct: 632 VTYLALLSACS-HAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLI 690
Query: 481 KFMP-ERDVVSWTGIIVGC 498
+ MP E V W ++ C
Sbjct: 691 RTMPMEPTVGVWQTLLSAC 709
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+N + +I+ +L+ + +SLR G Q+H K GF + + +LIDMY KCGE+D
Sbjct: 211 TNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDM 270
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSAC- 533
+F M +R+VVSWT ++VG Q+G A + EM S PNE T L AC
Sbjct: 271 AGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACC 330
Query: 534 ----RHAGL----------VEEAWTIFTSMKPEY----------------GLEPHLEHYY 563
AG+ EE + + +S+ Y GL L +
Sbjct: 331 VTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWN 390
Query: 564 CMVDLLGQAGCFDDAEQLIAEM---------PFKPDKTIWASMLKAC 601
M+ AG DA + EM +PD+ +AS+LKAC
Sbjct: 391 AMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKAC 437
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 346/694 (49%), Gaps = 84/694 (12%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K++H I K L++DI N L+ Y + +A+K+F ++ N+VS+T M++ + +
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
R A+ ++ M G +E N F + A+L C DL+LG +H + + T +
Sbjct: 168 NRERQAMEIFFRMRSSG-IELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFV 226
Query: 143 MNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG---------------- 184
N L+ +Y KCG L +LFD+ + ++A WN+++S
Sbjct: 227 SNALMGLYGKCGYLDSVLQLFDEM------PHRDIASWNTVISSVVKEMMYERAFELFRD 280
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
G+++HA +K GFE + +LI Y KCG
Sbjct: 281 MRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGS 340
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
I +ALF M RDV++WT +I E F L+ L A ++FD+ +
Sbjct: 341 IKHVVALFEKMRVRDVITWTEMITAYME---FGLTDL------------ALEVFDKMPAR 385
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ +Y N+++SG+ N + +A+ + G+ + +T T L AC L+
Sbjct: 386 NSISY------NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLM--E 437
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL--FHRLPKKDVVAWSGLI 394
++ + Q+HG I+ G+ + + + L+D+ R G + A ++ + + W+ +I
Sbjct: 438 AKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 497
Query: 395 MGCTKHGLNSLAYLLF-RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
G ++ A LF + + V++ ++VL VC LA GKQ+H +K GF
Sbjct: 498 CGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGF 557
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ S+I MY KC +DD + +F MP D+VSW G+I G + + EA++ + +
Sbjct: 558 LSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSK 617
Query: 514 MIQSRLKPNEITFLGVLSACRH--AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M ++ +KP+ +TF+ ++SA RH + LV+ +F SMK Y ++P +EHY +V +LG
Sbjct: 618 MEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGY 677
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G ++AE++I +MP +P+ ++W ++L AC H+NT + A+ LLA P DPS Y+++
Sbjct: 678 WGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILV 737
Query: 632 SNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
SN+Y+ G W VR+ + G K G SWI
Sbjct: 738 SNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 771
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 187/426 (43%), Gaps = 45/426 (10%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C + ++ G LH +IK G F N L+ +Y L+ +LFDEM
Sbjct: 193 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 252
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++I SW T++++ A L+ M + F S +L A + +GR
Sbjct: 253 RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGRE 311
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS- 183
IH + + E + ++N L+ Y KCGS+ LF++ +V W M++
Sbjct: 312 IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMR------VRDVITWTEMITA 365
Query: 184 ----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSW 235
G + + + ++ +++ + + GE LA F M E V +
Sbjct: 366 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 425
Query: 236 TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
TG++ C F + +AL+DM + C + +A+K+ S
Sbjct: 426 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKM----FS 481
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG-MCIDSYTFTSALKACINLLN 334
+ + +W SMI GY N Q EEAI+L G M +D T+ L C L
Sbjct: 482 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVC-GTLA 540
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
F+ Q+H + SG+ D VG+++I +Y++ N+ A+++F+ +P D+V+W+GLI
Sbjct: 541 FH-EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 599
Query: 395 MGCTKH 400
G H
Sbjct: 600 AGHLLH 605
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG + GK +HC +K G D+ GN++++MY+ ++++DA K+F+ M +IVSW
Sbjct: 536 CGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSW 595
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
++ + +++ + A+ +++ M E ++P+ + ++ A
Sbjct: 596 NGLIAGHLLHRQGDEALSVWSKM-EKAGIKPDTVTFVLIISA 636
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 203/618 (32%), Positives = 304/618 (49%), Gaps = 96/618 (15%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----WAASAYGNVAL 177
R +H + + + + N L+D Y KCGSL R+LFD+ W + G L
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 178 --------------------WNSMLSGGKQVHAFCV----------KRGFEKEDVTLTSL 207
WNSM+SG Q H C K GF + T S
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQ-HDRCEEALYYFAMMHKEGFVLNEYTFASG 158
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ +++ G+ + + + + +S + +G SALVDMYS C + +A+
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLS--DVYIG---------SALVDMYSKCGNVNDAQ 207
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD+ NV WNS+I+ Y N EA+ + + S + D T S +
Sbjct: 208 QVFDEMGD------RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVIS 261
Query: 328 ACINLLNFNSRFALQVHGLIVT-SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--- 383
AC +L + +VH +V D I+ + +D+YA+ +K A +F +P
Sbjct: 262 ACASLSAI--KVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 384 ----------------------------KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+++VV+W+ LI G T++G N A LF +
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKEDITL-TSLIDMYLK 469
+ + +++LK C+ LA L G Q H +K GF E++DI + SLIDMY+K
Sbjct: 380 ESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG +++G +F+ M ERD VSW +I+G QNG EA+ F+EM+ S KP+ IT +GV
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGV 499
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC HAG VEE F+SM ++G+ P +HY CMVDLLG+AG ++A+ +I EMP +P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQP 559
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D IW S+L AC+ H N L +AE+L + YV+LSN+YA LG W VRK
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRK 619
Query: 650 AGKKLG-EKKAGMSWIEV 666
+K G K+ G SWI++
Sbjct: 620 LMRKEGVTKQPGCSWIKI 637
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 253/561 (45%), Gaps = 114/561 (20%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ +H +IK G S ++F N L+ YA SL D +LFD+M ++N+ +W ++VT T
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 83 KRPNWAIRLYNHMLE-------------------------YGSVEPNGFM-----YSAVL 112
+ A L+ M E + + GF+ +++ L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAAS 170
ACS D++ G IH I + D + + L+DMY KCG++ +++FD+ +
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGD---- 215
Query: 171 AYGNVALWNSMLSG--------------------------------------------GK 186
NV WNS+++ G+
Sbjct: 216 --RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQ 273
Query: 187 QVHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+VHA VK + D+ L+ + +DMY KC I + +F+ MP R+V++ T ++ G
Sbjct: 274 EVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSG---- 329
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y+ AR +F + A NV WN++I+GY N +NEEA++
Sbjct: 330 -----------YAMAASTKAARLMFTKM------AERNVVSWNALIAGYTQNGENEEALS 372
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINL----LNFNSRFALQVHGLIVTSGYELDYIVGSN 361
L + +C YTF + LKAC +L L + + HG SG E D VG++
Sbjct: 373 LFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+Y + G V+ +F ++ ++D V+W+ +I+G ++G + A LFR+M++S + +
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPD 492
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAF-CVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLA 478
+ VL C + G+ H F + R F + T ++D+ + G +++ +
Sbjct: 493 HITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 479 LFKFMP-ERDVVSWTGIIVGC 498
+ + MP + D V W ++ C
Sbjct: 551 IIEEMPVQPDSVIWGSLLAAC 571
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 187/477 (39%), Gaps = 145/477 (30%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C + +G +H I K D++ G+ L+ MY+ ++NDA ++FDEM +N
Sbjct: 158 GLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN 217
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +++T Y N A++++ MLE VEP+ ++V+ AC+ + +G+ +H
Sbjct: 218 VVSWNSLITCYEQNGPAVEALKVFQVMLE-SWVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ---------------YSNWAAS 170
R+ + +KL D +L N +DMY KC + R +FD Y+ A++
Sbjct: 277 ARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAAST 336
Query: 171 ----------AYGNVALWNSMLSG------------------------------------ 184
A NV WN++++G
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKAC 396
Query: 185 --------GKQVHAFCVKRGF-----EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPER 230
G Q H +K GF E++D+ + SLIDMY+KCG +++G +F M ER
Sbjct: 397 ADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D VSW +I+G +A + YGN
Sbjct: 457 DCVSWNAMIIG----------------------------------FAQNGYGN------- 475
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
EA+ L + SG D T L AC G S
Sbjct: 476 -----------EALELFREMLDSGEKPDHITMIGVLSAC-------GHAGFVEEGRHYFS 517
Query: 351 GYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
D+ V + ++DL R G ++ A + +P + D V W L+ C H
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 209/752 (27%), Positives = 353/752 (46%), Gaps = 120/752 (15%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+Q +L R+ K G D T ++S A L DA L + + V+W ++ +Y
Sbjct: 240 QQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASY 299
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ + + LY M + G + P ++++L A + D GR IH + L+ +
Sbjct: 300 SQSGLDSEVFGLYKDMKKQG-LMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDAN 358
Query: 140 TVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
+ ++L+++YVK C S +K+FD S N+ +WN++L G
Sbjct: 359 VFVGSSLINLYVKHGCISDAKKVFD------FSTEKNIVMWNAILYGFVQNELQEETIQM 412
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
G+QVH +K G + + +++DMY K
Sbjct: 413 FQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSK 472
Query: 214 CGEIDDGLALFNFMPER-----------------------------------DVVSWTGI 238
G ID ALF+ +P + D VS+
Sbjct: 473 LGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATA 532
Query: 239 IVGCFE-------------------CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAA 278
I C CS + S+L+D+YS + +RK+ +
Sbjct: 533 INACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDA--- 589
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
++ N++I+G V N + +EAI L + G ++TFTS L C ++ S
Sbjct: 590 ---SSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVS--SV 644
Query: 339 FALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMG 396
QVH + S D +G +L+ +Y + ++ A +L +P K++V W+ I G
Sbjct: 645 IGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++G + + ++F M + + ++ +SVLK CS +A+L GK++H VK GF
Sbjct: 705 YAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSY 764
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ ++L+DMY KCG++ +FK + R +++ W +IVG +NG A EA+ FQ+M
Sbjct: 765 ETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQ 824
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S++KP+++T LGVL AC HAGL+ E F SM YG+ P ++HY C++DLLG+ G
Sbjct: 825 ESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHL 884
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
A+++I ++PF+ D IWA+ L AC+ H + + + A++L+ P+ S YV LS+++
Sbjct: 885 QKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLH 944
Query: 636 ATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
A G W R+A ++ G K G SWI V
Sbjct: 945 AAAGNWVEAKVAREAMREKGVMKFPGCSWITV 976
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 166/654 (25%), Positives = 295/654 (45%), Gaps = 70/654 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + +++ G+ +HC ++K G +F L+ MYA ++DA ++FD +A
Sbjct: 160 IAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA 219
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ + WT+M+ Y R A+ L++ M + GSV P+ ++ + G L R
Sbjct: 220 CPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSV-PDQVTCVTIISTLASMGRLGDAR 278
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA-YGNVALWNSMLSG 184
+ +RI TV N ++ Y + G L ++F Y + + + S+LS
Sbjct: 279 TLLKRIRMTS----TVAWNAVIASYSQSG-LDSEVFGLYKDMKKQGLMPTRSTFASILSA 333
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G+Q+HA VK G + +SLI++Y+K G I D +F+F E+++V W
Sbjct: 334 AANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 393
Query: 236 TGIIVGC--------------------FECSCFT----LSALVDMYS-------NCNV-- 262
I+ G E FT L A +++YS +C
Sbjct: 394 NAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIK 453
Query: 263 ------LCEARKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITL 306
L A + D YS A WN++I G NE+ EAI +
Sbjct: 454 NGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINM 513
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L + G+ +D +F +A+ AC N+ + Q+H + ++ VGS+LIDLY
Sbjct: 514 LKRMKFYGIALDEVSFATAINACSNIWAIET--GKQIHSASIKYNVCSNHAVGSSLIDLY 571
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
++ G+V+S+ ++ + +V + LI G ++ A LF+ ++ + F +
Sbjct: 572 SKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFT 631
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPE 485
S+L C+ S GKQVH + +K +D +L SL+ +YLKC ++D L + +P+
Sbjct: 632 SILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPD 691
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+++V WT I G QNG + +++ F M ++ +E TF VL AC + +
Sbjct: 692 HKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKE 751
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + G + ++D+ + G + ++ E+ + + W SM+
Sbjct: 752 IH-GLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMI 804
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 203/498 (40%), Gaps = 117/498 (23%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C S+ G+ +HC IK G+ D+F N +L MY+ +++ A LF +
Sbjct: 429 VSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPV 488
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW ++ N+ AI + M YG + + ++ + ACS ++ G+
Sbjct: 489 KDSVSWNALIVGLAHNEEEGEAINMLKRMKFYG-IALDEVSFATAINACSNIWAIETGKQ 547
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF--------------------DQY 164
IH + + + + ++L+D+Y K G + +RK+ +
Sbjct: 548 IHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNR 607
Query: 165 SNWAASAYGNVA---------LWNSMLSG---------GKQVHAFCVKRGFEKEDVTL-T 205
+ A + V + S+LSG GKQVH + +K +D +L
Sbjct: 608 EDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI 667
Query: 206 SLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVG----------------------- 241
SL+ +YLKC ++D L +P+ +++V WT I G
Sbjct: 668 SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVR 727
Query: 242 ------------CFECSCFT--------------------LSALVDMYSNCNVLCEARKL 269
C E + T SAL+DMYS C + + ++
Sbjct: 728 SDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEI 787
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F + + N+ WNSMI G+ N EA+ L + S + D T L AC
Sbjct: 788 FKELKNRQ-----NIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIAC 842
Query: 330 INL------LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L+F + QV+G++ +D+ + LIDL R G+++ A E+ +LP
Sbjct: 843 SHAGLISEGLHFFDSMS-QVYGIVP----RVDHY--ACLIDLLGRGGHLQKAQEVIDQLP 895
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W+ + C H
Sbjct: 896 FRADGVIWATYLAACQMH 913
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVK---SALELFHRLPKKDVVAWSGLIMGCTK 399
+H I+ G L +G L+DLY R G V AL P A S ++ C
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASS--VLSCHA 132
Query: 400 HGLNSL----AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
+ A+ R I S D QF I+ VL CS L +L G+QVH +K GF
Sbjct: 133 RSGSPRDVLDAFQRIRCSIGSTPD--QFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS 190
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
L+DMY KCGE+DD +F + D + WT +I G + GR ++A+A F M
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+ P+++T + ++S G + +A T+ ++
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIR 285
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 43/289 (14%)
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S G D + L AC L QVH ++ SG+ + L+D+YA+ G
Sbjct: 150 SIGSTPDQFGIAVVLSACSRLGALE--HGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGE 207
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
V A +F + D + W+ +I G + G A LF M
Sbjct: 208 VDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRM------------------ 249
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
K G + +T ++I G + D L K + V+W
Sbjct: 250 -----------------EKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAW 292
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I Q+G E +++M + L P TF +LSA + +E I +
Sbjct: 293 NAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHAT-AV 351
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASML 598
++GL+ ++ +++L + GC DA+++ F +K I W ++L
Sbjct: 352 KHGLDANVFVGSSLINLYVKHGCISDAKKV---FDFSTEKNIVMWNAIL 397
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D L+ C + ++ GK +H I+K G + L+ MY+ + + ++F
Sbjct: 729 DEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIF 788
Query: 62 DEMA-RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
E+ R+NI+ W +M+ + N N A+ L+ M E ++P+ VL ACS +G
Sbjct: 789 KELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQE-SQIKPDDVTLLGVLIACSHAGL 847
Query: 121 LDLG 124
+ G
Sbjct: 848 ISEG 851
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 320/636 (50%), Gaps = 45/636 (7%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++IF+ N +LS Y+ L A LF +N +WT M+ A+ + R + A+ L+ M
Sbjct: 286 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345
Query: 96 LEYGSVEPNGFMYSAVL--KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
L G + P+ + VL C++ +H + L+ + NTLLD Y K
Sbjct: 346 LGEGVI-PDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKH 397
Query: 154 GSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
G L R++F + + A Y N+M+ G C K G + + L + +
Sbjct: 398 GLLAAARRVFLEMHDKDAVTY------NAMMMG-------CSKEGLHTQALQLFAAMR-- 442
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+ G L L + R T ++ + F ++L+D YS C+ L + R+LFD
Sbjct: 443 -RAGYSRHPLHLLQYSHSRS--RSTSVL------NVFVNNSLLDFYSKCDCLDDMRRLFD 493
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ NV+ +N +I+ Y N+ + L + G + + L +
Sbjct: 494 EMPE-----RDNVS-YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGS 547
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + + Q+H +V G + ++G+ LID+Y++ G + +A F +K ++W+
Sbjct: 548 LPDVH--IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 605
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI G ++G + A LF DM + ++ SS++K S LA + G+Q+H++ ++
Sbjct: 606 ALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 665
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G++ + + L+DMY KCG +D+ L F MPER+ +SW +I G AK AI F
Sbjct: 666 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 725
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+ M+ P+ +TFL VL+AC H GL +E F MK +Y + P EHY C++D LG+
Sbjct: 726 EGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGR 785
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
GCF ++++ EMPFK D IW S+L +C H N +L + A++L P D + YV+L
Sbjct: 786 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 845
Query: 632 SNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
SN+YA G W+ + V+K + G K++G SW+E+
Sbjct: 846 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEI 881
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 217/558 (38%), Gaps = 129/558 (23%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
SLH IK+GL +F N LL Y L A ++F EM K+ V++ M+ +
Sbjct: 369 PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKE 428
Query: 83 KRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A++L+ M G S P L L + H R +R +
Sbjct: 429 GLHTQALQLFAAMRRAGYSRHP-----------------LHLLQYSHSR-SRSTSVLNVF 470
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG------------------- 173
+ N+LLD Y KC L R+LFD+ N +AY
Sbjct: 471 VNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 530
Query: 174 ---NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
V + +MLS GKQ+HA V G ED+ +LIDMY KCG +D
Sbjct: 531 FDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAK 590
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ F+ E+ +SWT +I G
Sbjct: 591 SNFSNRSEKSAISWTALITG---------------------------------------- 610
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
YV N Q+EEA+ L S + +G+ D TF+S +KA +L
Sbjct: 611 ------------YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGR 656
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H ++ SGY+ GS L+D+YA+ G + AL F +P+++ ++W+ +I +G
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCS-------CLASLRRGKQVHAFCVKRGFE 454
A +F M++ + + SVL CS C+ K H + + E
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKE 774
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ID + G + MP + D + WT I+ C +G + A +
Sbjct: 775 H----YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 830
Query: 514 MIQSRLKPNEITFLGVLS 531
+ ++P + T +LS
Sbjct: 831 LFG--MEPTDATPYVILS 846
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 28/251 (11%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G + GK +H +++ GL+ + GN L+ MY+ L+ A F + K+ +SWT
Sbjct: 546 GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 605
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
++T Y N + A++L++ M G + P+ +S+++KA S + LGR +H + R
Sbjct: 606 ALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 664
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSG----GKQ 187
+ + L+DMY KCG L L FD+ N WN+++S G+
Sbjct: 665 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER------NSISWNAVISAYAHYGEA 718
Query: 188 VHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-----WTG 237
+A + GF + VT S++ G D+ + F+ M + +S +
Sbjct: 719 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 778
Query: 238 II-----VGCF 243
+I VGCF
Sbjct: 779 VIDTLGRVGCF 789
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
I G+ LH +I+ G +F+G+ L+ MYA L++A + FDEM +N +SW +++A
Sbjct: 652 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 711
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD-----LGRLIHERITR 133
Y AI+++ ML G P+ + +VL ACS +G D + H+
Sbjct: 712 YAHYGEAKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 770
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV 193
E+ +++TL V C S +K+ + A L + + G +++
Sbjct: 771 PWKEHYACVIDTL--GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAA 828
Query: 194 KR--GFEKEDVTLTSLI-DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ G E D T ++ ++Y + G+ +D + M +R V +G
Sbjct: 829 DKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 875
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 203/637 (31%), Positives = 340/637 (53%), Gaps = 39/637 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
AL C ++QG+ +H R+++ ++ D+ N+L++MYA S+ + K+FD M RK
Sbjct: 118 ALAACAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRK 177
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VSW M++A+ P A+ LY H ++ +EPNGF+++++L AC+ G+L+LG I
Sbjct: 178 NLVSWNAMISAFVQCDYPEQALELY-HRMKRERLEPNGFVFASLLTACASLGNLELGSSI 236
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H+RIT L+ D V+ N L++MY KCG + L ++ A +V W SM++G Q
Sbjct: 237 HQRITSLGLQRDIVMENALINMYSKCGCMDEAL----EVFSGLATRDVFTWTSMIAGYAQ 292
Query: 188 V----HAFCVKRGFEKEDVTLTS--LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ AF G ++ V+ TS + + C ++ G L + V G
Sbjct: 293 LGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTLEQGKHL------HEEVKAFG---- 342
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
FE +AL+ MYS C L +A LF A + W++M++ +
Sbjct: 343 -FESITVVETALMFMYSRCGSLEDAEFLF------AKMQQKDYVSWSAMVTSHAQFGDPG 395
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A+TL + GM + TF SAL+AC L +SR + + LI SG + + ++
Sbjct: 396 KALTLFRQMILEGMQLSLPTFCSALQACS--LKRDSRLSKTIRELIDWSGIDKMDSIRAD 453
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ Y++ G+++ A ++F R+ +DV+ W+ +I G + G + A LF M + +
Sbjct: 454 LVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPD 513
Query: 422 QFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
SSVL+ CS +L G++VHA +G + D LI+MY +CG + D +F
Sbjct: 514 SVTFSSVLQACS---NLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIF 570
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ M +SW+ I+ C ++G+ + I ++ M+ + P+ +T + +L++C HAGL +
Sbjct: 571 ESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTD 630
Query: 541 EAWTIFTSMKPEYGLEPHL-EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
EA FT + ++ L PHL EHY CMVDLL +AG D+AE+LI+ M +PD +ML
Sbjct: 631 EACHYFTWIISDFEL-PHLDEHYQCMVDLLCRAGRLDEAEELIS-MIDRPDVVTLNTMLA 688
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
AC+ + + A Q+ +T + +V+LS +YA
Sbjct: 689 ACKNQQDLHRGARTAAQMQSTE-SCAAPFVLLSQIYA 724
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 243/598 (40%), Gaps = 120/598 (20%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y+ +L+ C ++ GR +H+ + R + L ++ MY KCG L + FD+ +
Sbjct: 17 YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76
Query: 166 NWAASAYGNVALWNSMLSG----------------------------------------- 184
+ N +WN M+SG
Sbjct: 77 D------KNDFVWNLMISGYARSGKNREALELFHKMDIPPNGFIFASALAACAGLGDLEQ 130
Query: 185 GKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
G+++H ++ DV + SL+ MY +CG + +G+ +F+ MP +++VSW +I
Sbjct: 131 GREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFV 190
Query: 244 EC------------------------------SCFTL----------------------- 250
+C +C +L
Sbjct: 191 QCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIV 250
Query: 251 --SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+AL++MYS C + EA ++F + A +V W SMI+GY EA
Sbjct: 251 MENALINMYSKCGCMDEALEVF------SGLATRDVFTWTSMIAGYAQLGFGSEAFAFYD 304
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ + S TF + L AC L +H + G+E +V + L+ +Y+R
Sbjct: 305 GMRRDCVSPTSATFVALLSACSTLEQ-----GKHLHEEVKAFGFESITVVETALMFMYSR 359
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G+++ A LF ++ +KD V+WS ++ + G A LFR MI ++ S
Sbjct: 360 CGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSA 419
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L+ CS R K + G +K D L+ Y KCG++++ +F M RDV
Sbjct: 420 LQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDV 479
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
++WT +I G Q G +K A+ F M ++P+ +TF VL AC + +E+ +
Sbjct: 480 LTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHAR 536
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ G + ++++ + G DA Q+ M + + W++++ C H
Sbjct: 537 ILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMD-RSSRISWSAIMTLCARHGQ 593
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L AL+ C +R + K++ I G+ + +L+S Y+ + +A K+
Sbjct: 411 LSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKI 470
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +++++WT M+ Y A+ L++ M G VEP+ +S+VL+ACS +
Sbjct: 471 FDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQACS---N 526
Query: 121 LDLGRLIHERI-TREKLEYDTVLMNTLLDMYVKCGSL--TRKLF---DQYSNWAASAYGN 174
L+ GR +H RI + + L N L++MY +CGS+ R++F D+ S + SA
Sbjct: 527 LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMT 586
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + V G + VTL ++++ G D+ F ++
Sbjct: 587 LCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWI 639
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 202/707 (28%), Positives = 336/707 (47%), Gaps = 75/707 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +K GK +H ++++G+ +D+F + ++ YA + +A +FD M +++
Sbjct: 148 LPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDV 207
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W ++ + Y + P + ++ M+ G V+P+ S +L ACS DL G+ IH
Sbjct: 208 VTWNSLSSCYVNCGFPQKGLNVFREMVLDG-VKPDPVTVSCILSACSDLQDLKSGKAIHG 266
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS---- 183
+ + + + N L+++Y C + + +FD + NV WNS+ S
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLM------PHRNVITWNSLASCYVN 320
Query: 184 -----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G V G + + + ++S++ + ++ G + F + +V
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE---- 376
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
F +ALV++Y+NC + EA+ +FD + NV WNS+ S YV
Sbjct: 377 -------DVFVCTALVNLYANCLCVREAQTVFDLM------PHRNVVTWNSLSSCYVNCG 423
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++ + + + +G+ D T S L AC +L + S +HG V G D V
Sbjct: 424 FPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKS--GKVIHGFAVRHGMVEDVFV 481
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL------------------------- 393
+ L+ LYA+ V+ A +F +P ++V +W+G+
Sbjct: 482 CNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEV 541
Query: 394 ----------IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
I GC K+ A +FR M ++ I S+L+ CS LR GK+
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE 601
Query: 444 VHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+H + V R ++ D+ T +L+DMY KCG + +F MP +DV SW +I G +G
Sbjct: 602 IHCY-VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHG 660
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
KEA++ F++M+ S +KP+ TF VLSAC H+ LVEE IF SM ++ +EP EHY
Sbjct: 661 NGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHY 720
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C+VD+ +AGC ++A I MP +P W + L C + N +L I A++L P
Sbjct: 721 TCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDP 780
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+ YV L N+ T +W SK+RK K+ G K G SW V +
Sbjct: 781 NGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGN 827
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/699 (21%), Positives = 269/699 (38%), Gaps = 143/699 (20%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
+ C R + K H + G+ D+ GN + Y + A ++FD++ +++V
Sbjct: 48 KACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVV 107
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
+W ++ Y + P + ++ M V+ N S++L CS DL G+ IH
Sbjct: 108 TWNSLSACYVNCGFPQQGLNVFRKM-GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGF 166
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM------- 181
+ R + D + + ++ Y KC + + +FD + +V WNS+
Sbjct: 167 VVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM------PHRDVVTWNSLSSCYVNC 220
Query: 182 -------------------------------------LSGGKQVHAFCVKRGFEKEDVTL 204
L GK +H F +K G +
Sbjct: 221 GFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVS 280
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+L+++Y C + + A+F+ MP R+V++W
Sbjct: 281 NALVNLYESCLCVREAQAVFDLMPHRNVITW----------------------------- 311
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
NS+ S YV ++ + + + +G+ D +S
Sbjct: 312 -----------------------NSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSS 348
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L AC L + S +HG V G D V + L++LYA V+ A +F +P
Sbjct: 349 ILPACSQLKDLKS--GKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPH 406
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
++VV W+ L G +FR+M+ + + + S+L CS L L+ GK +
Sbjct: 407 RNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVI 466
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H F V+ G ++ +L+ +Y KC + + +F +P R+V SW GI+ N
Sbjct: 467 HGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEY 526
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-----KPE------- 552
++ + F +M + +K +EIT+ V+ C +EEA IF M KP+
Sbjct: 527 EKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSI 586
Query: 553 -----------YGLEPH-----------LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
G E H L +VD+ + G + + MP K D
Sbjct: 587 LRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-D 645
Query: 591 KTIWASMLKACETHNNTK-LVSIIAEQLLATSPEDPSKY 628
W +M+ A H N K +S+ + LL+ D + +
Sbjct: 646 VFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATF 684
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 10/299 (3%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV---HGLIVTSGYELDYIV 358
EAI + + + G+ D F + KAC SR AL+V H G D +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAA-----SRDALKVKQFHDDATRCGVMSDVSI 77
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
G+ I Y + V+ A +F L +DVV W+ L G +FR M +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N +SS+L CS L L+ GK++H F V+ G ++ ++ ++ Y KC + +
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MP RDVV+W + G ++ + F+EM+ +KP+ +T +LSAC
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
++ I ++G+ ++ +V+L C +A+ + MP + + W S+
Sbjct: 258 LKSGKAIH-GFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVITWNSL 314
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 129/317 (40%), Gaps = 76/317 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL ++ L C + +K GK +H +++G+ +D+F N LLS+YA + +A +F
Sbjct: 443 DLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVF 502
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-------------------------- 95
D + + + SW ++TAY +NK + +++ M
Sbjct: 503 DLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIE 562
Query: 96 --------LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
++ +P+ ++L+ACSLS L +G+ IH + R ++D N L+
Sbjct: 563 EAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALV 622
Query: 148 DMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV----------------- 188
DMY KCG SL+R +FD ++ + N M GK+
Sbjct: 623 DMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSA 682
Query: 189 ----------HAFCVKRG------------FEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
H+ V+ G E E T ++D+Y + G +++
Sbjct: 683 TFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQR 742
Query: 227 MP-ERDVVSWTGIIVGC 242
MP E ++W + GC
Sbjct: 743 MPMEPTAIAWKAFLAGC 759
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 35/638 (5%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+++H +K G + NNLL Y L DA +FDEM R+N+VSW+ ++ A +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 83 KRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A+ L+ ML G + PN F +A++ C+ + D G +H + ++ D
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAA---SAYGNVALWNSML--------SGGKQVHA 190
+ TL+DMY KCG + S+W A + +V W SM+ SG +
Sbjct: 142 VAGTLVDMYAKCGRVG-------SSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAI 194
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
K+ + + LK ++ + +P V + +G E
Sbjct: 195 VLFKKMLVLKVWPTNATFSCILKVFDVPE------LLPSGKQVHGCLVKMGT-EVDPALG 247
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+AL+ MY C + D+ + A + S+++ Y N N EA+ + +
Sbjct: 248 TALLAMYGRCGGM-------DEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM 300
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
M ID TS L+ C +L R ++H + + + LD ++ + ++ +Y + G
Sbjct: 301 LMGHMPIDQSAITSLLQVCSSLGQL--RVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ S+ +F+ L KD ++W+ L+ ++ L+ A FR+M+ + + F I+SVL+
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS +SL G Q+H+ VK G + + +L+ MY KCG + L +F M R ++S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I Q+G AI F M + + P++ TF+G+LS+C GLV E F MK
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+Y LEP +EHY CMVDL +AG F DA + I MP +PD+ +W ++L +C H N L
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLG 598
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+ A+++L PEDPS Y++LS+++A++ MWD ++ R
Sbjct: 599 RMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNR 636
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 200/521 (38%), Gaps = 121/521 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + G+ +H +K G+ +D L+ MYA + + + F +++++SW
Sbjct: 115 CARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSW 174
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ ++ + AI L+ ML V P +S +LK + L G+ +H
Sbjct: 175 TSMIACLVNHGDSGYRDTAIVLFKKMLVL-KVWPTNATFSCILKVFDVPELLPSGKQVHG 233
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYSNWA-ASAYGN------- 174
+ + E D L LL MY +CG + R D +S + +AY
Sbjct: 234 CLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEA 293
Query: 175 VALWNSMLSGG------------------------KQVHAFCVKRGFEKEDVTLTSLIDM 210
V ++ ML G K++H + +K F + + L +++ +
Sbjct: 294 VRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTV 353
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF---------------------ECSCFT 249
Y KCG+I +FN + +D +SWT ++ C+ E S F
Sbjct: 354 YGKCGDIASSEIVFNTLENKDTISWTALLT-CYVQNDLSQEALFFFREMVRKGLESSIFC 412
Query: 250 LS-----------------------------------ALVDMYSNCNVLCEARKLFDQYS 274
++ ALV MY+ C V+ A K+F+
Sbjct: 413 ITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMR 472
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+ + WN++I+ + + AI L + +C D YTF L +C
Sbjct: 473 NRG------IISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSC----- 521
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDV 387
SR L G + Y + ++DL+AR G A++ +P + D
Sbjct: 522 --SRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISS 427
+ W L+ C HG L + + ++ +D + +II S
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L+ C ++ K +HC +K D N ++++Y + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ + K+ +SWT ++T Y N A+ + M+ G +E + F ++VL+ACS +
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG-LESSIFCITSVLRACSATSS 425
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAA---- 169
L G IH R+ + ++ DT + N L+ MY KCG + K+F+ N W A
Sbjct: 426 LSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITS 485
Query: 170 -SAYGN----VALWNSM-------------------------LSGGKQVHAFCVKRGFEK 199
S +GN + L++ M G + K E
Sbjct: 486 FSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+ T ++D++ + G D + + MP + D + W ++ C
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 266/520 (51%), Gaps = 55/520 (10%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ+H G + + S+ MY++CG + D +F+ M ++DVV
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV----------- 183
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
T SAL+ Y+ L E ++ + S A N+ WN ++SG+ + ++EA+
Sbjct: 184 ----TCSALLCAYARKGCLEEVVRILSEMESSGIEA--NIVSWNGILSGFNRSGYHKEAV 237
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ IH G C D T +S L + + N +HG ++ G D V S +ID
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN--MGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 365 LYARLGNV-------------------------------KSALELFHRLPKK----DVVA 389
+Y + G+V ALE+F ++ +VV+
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I GC ++G + A LFR+M + N I S+L C +A+L G+ H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ ++LIDMY KCG I+ +F MP +++V W ++ G +G+AKE ++
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ ++++RLKP+ I+F +LSAC GL +E W F M EYG++P LEHY CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A LI EMPF+PD +W ++L +C NN L I AE+L PE+P YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+LSN+YA GMW + +R + LG KK G SWI+V +
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 222/550 (40%), Gaps = 97/550 (17%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H RI+K G D + L++ Y+++ NDA + + I S+++++ A T K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+I +++ M +G + P+ + + K C+ +G+ IH L+ D + +
Sbjct: 98 TQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 146 LLDMYVKCGSL--TRKLFDQYSN-----------------------------WAASAYGN 174
+ MY++CG + RK+FD+ S+ ++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
+ WN +LSG G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ +K+G K+ ++++IDMY K G + ++LFN + I G +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG------LSR 330
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ LVD +A ++F+ + NV W S+I+G N ++ EA+ L +
Sbjct: 331 NGLVD---------KALEMFELFKEQTMEL--NVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+G+ + T S L AC N+ HG V + VGS LID+YA+ G
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGH--GRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ + +F+ +P K++V W+ L+ G + HG +F ++ + + +S+L
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 431 VCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDV 488
C + G K + G + + ++++ + G++ + L K MP E D
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 489 VSWTGIIVGC 498
W ++ C
Sbjct: 558 CVWGALLNSC 567
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q H I+ SG + D + + LI Y+ A + +P + ++S LI TK
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L + + +F M + + ++ ++ KVC+ L++ + GKQ+H G + +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
S+ MY++CG + D +F M ++DVV+ + ++ + G +E + EM S ++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSM 549
N +++ G+LS +G +EA +F +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 128/339 (37%), Gaps = 111/339 (32%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + K GK +HC GL D F ++ MY + DA K+FD M+ K++V+
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVE------------------------------ 102
+ ++ AY +R+ + M E +E
Sbjct: 186 SALLCAYARKGCLEEVVRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 103 -----PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
P+ S+VL + S L++GRLIH + ++ L D +++ ++DMY K G +
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 157 -TRKLFDQYSNWAA---SAYG--------------------------NVALWNSMLSG-- 184
LF+Q+ A +AY NV W S+++G
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 185 --GKQVHAFCVKR-----GFEKEDVTLTS------------------------------- 206
GK + A + R G + VT+ S
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 207 ----LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
LIDMY KCG I+ +FN MP +++V W ++ G
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 53/275 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY------------- 48
D + L G + G+ +H +IK GL +D + ++ MY
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 49 ------------ADFTSLN---------DAHKLFDEMARK-NIVSWTTMVTAYTSNKRPN 86
A T L+ + +LF E + N+VSWT+++ N +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A+ L+ M + V+PN ++L AC L GR H R L + + + L
Sbjct: 371 EALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 147 LDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF---CVKR 195
+DMY KCG +L++ +F+ N+ WNS+++G K+V + ++
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPT------KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+ + ++ TSL+ + G D+G F M E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG ++ G+S H ++ L ++ G+ L+ MYA +N + +F+ M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
KN+V W +++ ++ + + + ++ ++ ++P+ ++++L AC G D G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 125 ----RLIHERITREKLEYDTVLMNTL 146
+ E + +LE+ + ++N L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLL 535
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 206/752 (27%), Positives = 357/752 (47%), Gaps = 120/752 (15%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+Q +L R+ K G + D T ++S A L+DA L + + V+W ++++Y
Sbjct: 243 QQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSY 302
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ + + LY M G + P ++++L A + D G+ IH + L+ +
Sbjct: 303 SQSGLESEVFGLYKDMKRQG-LMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDAN 361
Query: 140 TVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
+ ++L+++YVK C S +K+FD S N+ +WN+ML G
Sbjct: 362 VFVGSSLINLYVKHGCISDAKKVFD------FSTEKNIVMWNAMLYGFVQNDLQEETIQM 415
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
G+QVH +K + + +++DMY K
Sbjct: 416 FQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSK 475
Query: 214 CGEIDDGLALFNFMPER-----------------------------------DVVSWTGI 238
G ID ALF+ +P + D VS+
Sbjct: 476 LGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATA 535
Query: 239 IVGCF---------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQYSSWAA 278
I C + C ++ S+L+D+YS + +RK+ +
Sbjct: 536 INACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDA--- 592
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
++ N++I+G V N + +EAI L + G ++TF S L C ++ S
Sbjct: 593 ---SSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVS--SV 647
Query: 339 FALQVHGLIVTSGY-ELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMG 396
QVH + S D +G +L+ +Y + ++ A +L +P K++V W+ I G
Sbjct: 648 IGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISG 707
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++G + + ++F M + + ++ +SVLK CS +A+L GK++H +K GF
Sbjct: 708 YAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSY 767
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ ++L+DMY KCG++ +FK + +++++ W +IVG +NG A EA+ FQ+M
Sbjct: 768 ETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQ 827
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S+LKP+E+T LGVL AC HAGL+ E +F SM YG+ P ++HY C++DLLG+ G
Sbjct: 828 ESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHL 887
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+A+++I ++PF+ D IWA+ L AC+ H + + + A++L+ P+ S YV LS+++
Sbjct: 888 QEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLH 947
Query: 636 ATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
A G W R+A ++ G K G SWI V
Sbjct: 948 AAAGNWVEAKVAREAMREKGVMKFPGCSWITV 979
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/656 (24%), Positives = 293/656 (44%), Gaps = 82/656 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++QG+ +HC ++K G F L+ MYA + DA ++FD +A +
Sbjct: 167 LSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDT 226
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W +M+ Y R A+ L++ M + GS P+ Y ++ + G L R + +
Sbjct: 227 ICWASMIAGYHRVGRYQQALALFSRMEKMGSA-PDQVTYVTIISTLASMGRLSDARTLLK 285
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA-YGNVALWNSMLSG---- 184
RI TV N ++ Y + G L ++F Y + + + SMLS
Sbjct: 286 RIQMPS----TVAWNAVISSYSQSG-LESEVFGLYKDMKRQGLMPTRSTFASMLSAAASM 340
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
G+Q+HA VK G + +SLI++Y+K G I D +F+F E+++V W ++
Sbjct: 341 TAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAML 400
Query: 240 VG-----------------------------------CF---------ECSCFTL----- 250
G C + C T+
Sbjct: 401 YGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMD 460
Query: 251 ------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+A++DMYS + A+ LF + + WN++I G NE+ EEA+
Sbjct: 461 ADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVS------WNALIVGLAHNEEEEEAV 514
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+L + G+ D +F +A+ AC N+ + Q+H + ++ VGS+LID
Sbjct: 515 YMLKRMKCYGIAPDEVSFATAINACSNIR--ATETGKQIHCASIKYNVCSNHAVGSSLID 572
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G+V+S+ ++ + +V + LI G ++ A LF+ ++ + F
Sbjct: 573 LYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFT 632
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFM 483
+S+L C+ S GKQVH++ +K +D +L SL+ +YLKC ++D L +
Sbjct: 633 FASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEV 692
Query: 484 PE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
P+ +++V WT I G QNG + +++ F M ++ +E TF VL AC + +
Sbjct: 693 PDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDG 752
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + G + ++D+ + G + ++ E+ K + W SM+
Sbjct: 753 KEIH-GLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 202/501 (40%), Gaps = 123/501 (24%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C S+ G+ +HC IK + D+F N +L MY+ +++ A LF +
Sbjct: 432 VSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPG 491
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW ++ N+ A+ + M YG + P+ ++ + ACS + G+
Sbjct: 492 KDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYG-IAPDEVSFATAINACSNIRATETGKQ 550
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF--------------------DQY 164
IH + + + + ++L+D+Y K G + +RK+ +
Sbjct: 551 IHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNR 610
Query: 165 SNWAASAYGNVA---------LWNSMLSG---------GKQVHAFCVKRGFEKEDVTL-T 205
+ A + V + S+LSG GKQVH++ +K +D +L
Sbjct: 611 EDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGI 670
Query: 206 SLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVG----------------------- 241
SL+ +YLKC ++D L +P+ +++V WT I G
Sbjct: 671 SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVR 730
Query: 242 ------------CFECSCFT--------------------LSALVDMYSNCNVLCEARKL 269
C E + T SAL+DMYS C + + ++
Sbjct: 731 SDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEI 790
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F + + N+ WNSMI G+ N EA+ L + S + D T L AC
Sbjct: 791 FKELKNKQ-----NIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIAC 845
Query: 330 I---------NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
NL + S QV+G++ +D+ + LIDL R G+++ A E+
Sbjct: 846 SHAGLISEGRNLFDSMS----QVYGIVP----RVDHY--ACLIDLLGRGGHLQEAQEVID 895
Query: 381 RLP-KKDVVAWSGLIMGCTKH 400
+LP + D V W+ + C H
Sbjct: 896 QLPFRADGVIWATFLAACQMH 916
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 43/283 (15%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H ++ G L +G L+DLY R G V AW L GC
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVG--------------YAWRAL--GCCTGAP 121
Query: 403 NSLAYLLF-----------RDMINSNQDV--------NQFIISSVLKVCSCLASLRRGKQ 443
S A RD++++ Q + +QF ++ VL CS L +L +G+Q
Sbjct: 122 ASGAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQ 181
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
VH +K GF L+DMY KC E+ D +F + D + W +I G + GR
Sbjct: 182 VHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGR 241
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
++A+A F M + P+++T++ ++S G + +A T+ ++ P +
Sbjct: 242 YQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWN 296
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFK---PDKTIWASMLKACET 603
++ Q+G + L +M + P ++ +ASML A +
Sbjct: 297 AVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAAS 339
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 43/289 (14%)
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S G D + L AC L QVH ++ SG+ + L+D+YA+
Sbjct: 153 SIGGTPDQFGLAVVLSACSRLGALEQ--GRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVE 210
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
VK A +F + D + W+ +I G + G A LF M
Sbjct: 211 VKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRM------------------ 252
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
K G + +T ++I G + D L K + V+W
Sbjct: 253 -----------------EKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAW 295
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I Q+G E +++M + L P TF +LSA +E I +
Sbjct: 296 NAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAA-AV 354
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASML 598
++GL+ ++ +++L + GC DA+++ F +K I W +ML
Sbjct: 355 KHGLDANVFVGSSLINLYVKHGCISDAKKVF---DFSTEKNIVMWNAML 400
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 218/699 (31%), Positives = 338/699 (48%), Gaps = 85/699 (12%)
Query: 7 VEAL-RHCGQRRSIKQGKSLHCRIIKYGLS----QDIFTGNNLLSMYADFTSLNDAHKLF 61
+EAL + C S+K+ + LH I+ S Q + NNL++MYA S +DA KLF
Sbjct: 7 LEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLF 66
Query: 62 DEMARKNIVSWTTMVTAYTSNKR-PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
D M RKN +S+ ++ AY + + +L++ M + PNG ++++L+ C L D
Sbjct: 67 DRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDM-GIQRLRPNGATFTSLLQVCCLLED 125
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LG +H ++ + D + LL MY CG L A +G
Sbjct: 126 WFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLES---------ACKVFG------- 169
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
EK+DV S+I YLK I + L+LF M +G I
Sbjct: 170 --------------YAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVR------SGTIF 209
Query: 241 GCFECS-----CFTL-------------------------SALVDMYSNCNVLCEARKLF 270
F CS C L +AL+DMY +C A LF
Sbjct: 210 TQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLF 269
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC-IDSYTFTSALKAC 329
+ ++ WNSMIS + NE+ E+A+ L + C D YTFT+ + A
Sbjct: 270 SRIQ------IPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISAT 323
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ + +H ++ +G + +G+ L+ +Y R +V++A +F + +KDVV
Sbjct: 324 GEFRA--TDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLMEEKDVVL 381
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +IMG + G A LF M + F +S L VC+ LA L++G+ +H V
Sbjct: 382 WTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAILKQGQMLHTQAV 441
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G E E SL+DMY K G + +F + D+ W +I G +G A+EA+
Sbjct: 442 KTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGGYSHHGMAEEAVM 501
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F E+++ L P+++TFL +LSAC H+GLVE+ ++ MK G+ P +HY CMV LL
Sbjct: 502 LFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKN-GITPGPKHYSCMVSLL 560
Query: 570 GQAGCFDDAEQLIAEMPFKPDK-TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
+AG D+AE+LI E + +W ++L +C N + + A+Q+L PED + Y
Sbjct: 561 SRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAAKQVLRLDPEDSATY 620
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++LSN+YA G WD ++++RK + L EK G+SWIE
Sbjct: 621 ILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGVSWIEA 659
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 35/638 (5%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+++H +K G + NNLL Y L DA +FDEM R+N+VSW+ ++ A +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 83 KRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A+ L+ ML G + PN F +A++ C+ + D G +H + ++ D
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAA---SAYGNVALWNSML--------SGGKQVHA 190
+ TL+DMY KCG + S+W A + +V W SM+ SG +
Sbjct: 142 VAGTLVDMYAKCGRVG-------SSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAI 194
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
K+ + + LK ++ + +P V + +G E
Sbjct: 195 VLFKKMLVLKVWPTNATFSCILKVFDVPE------LLPSGKQVHGCLVKMGT-EVDPALG 247
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+AL+ MY C + D+ + A + S+++ Y N N EA+ + +
Sbjct: 248 TALLAMYGRCGGM-------DEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM 300
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
M ID TS L+ C +L R ++H + + + LD ++ + ++ +Y + G
Sbjct: 301 LMGHMPIDQSAITSLLQVCSSLGQL--RVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ S+ +F+ L KD ++W+ L+ ++ L+ A FR+M+ + + F I+SVL+
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS +SL G Q+H+ VK G + + +L+ MY KCG + L +F M R ++S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I Q+G AI F M + + P++ TF+G+LS+C GLV E F MK
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+Y LEP +EHY CMVDL +AG F DA + I MP +PD+ +W ++L +C H N L
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLG 598
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+ A+++L PEDPS Y++LS+++A++ MWD ++ R
Sbjct: 599 RMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNR 636
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 200/521 (38%), Gaps = 121/521 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + G+ +H +K G+ +D L+ MYA + + + F +++++SW
Sbjct: 115 CARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSW 174
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ ++ + AI L+ ML V P +S +LK + L G+ +H
Sbjct: 175 TSMIACLVNHGDSGYRDTAIVLFKKMLVL-KVWPTNATFSCILKVFDVPELLPSGKQVHG 233
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYSNWA-ASAYGN------- 174
+ + E D L LL MY +CG + R D +S + +AY
Sbjct: 234 CLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEA 293
Query: 175 VALWNSMLSGG------------------------KQVHAFCVKRGFEKEDVTLTSLIDM 210
V ++ ML G K++H + +K F + + L +++ +
Sbjct: 294 VRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTV 353
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF---------------------ECSCFT 249
Y KCG+I +FN + +D +SWT ++ C+ E S F
Sbjct: 354 YGKCGDIASSEIVFNTLENKDTISWTALLT-CYVQNDLSQEALFFFREMVRKGLESSIFC 412
Query: 250 LS-----------------------------------ALVDMYSNCNVLCEARKLFDQYS 274
++ ALV MY+ C V+ A K+F+
Sbjct: 413 ITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMR 472
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+ + WN++I+ + + AI L + +C D YTF L +C
Sbjct: 473 NRG------IISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSC----- 521
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDV 387
SR L G + Y + ++DL+AR G A++ +P + D
Sbjct: 522 --SRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISS 427
+ W L+ C HG L + + ++ +D + +II S
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L+ C ++ K +HC +K D N ++++Y + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ + K+ +SWT ++T Y N A+ + M+ G +E + F ++VL+ACS +
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG-LESSIFCITSVLRACSATSS 425
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAA---- 169
L G IH R+ + ++ DT + N L+ MY KCG + K+F+ N W A
Sbjct: 426 LSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITS 485
Query: 170 -SAYGN----VALWNSM-------------------------LSGGKQVHAFCVKRGFEK 199
S +GN + L++ M G + K E
Sbjct: 486 FSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+ T ++D++ + G D + + MP + D + W ++ C
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 266/520 (51%), Gaps = 55/520 (10%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ+H G + + S+ MY++CG + D +F+ M ++DVV
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV----------- 183
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
T SAL+ Y+ L E ++ + S A N+ WN ++SG+ + ++EA+
Sbjct: 184 ----TCSALLCAYARKGCLEEVVRILSEMESSGIEA--NIVSWNGILSGFNRSGYHKEAV 237
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ IH G C D T +S L + + N +HG ++ G D V S +ID
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN--MGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 365 LYARLGNV-------------------------------KSALELFHRLPKK----DVVA 389
+Y + G+V ALE+F ++ +VV+
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I GC ++G + A LFR+M + N I S+L C +A+L G+ H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ ++LIDMY KCG I+ +F MP +++V W ++ G +G+AKE ++
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ ++++RLKP+ I+F +LSAC GL +E W F M EYG++P LEHY CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A LI EMPF+PD +W ++L +C NN L I AE+L PE+P YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+LSN+YA GMW + +R + LG KK G SWI+V +
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 222/550 (40%), Gaps = 97/550 (17%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H RI+K G D + L++ Y+++ NDA + + I S+++++ A T K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+I +++ M +G + P+ + + K C+ +G+ IH L+ D + +
Sbjct: 98 TQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 146 LLDMYVKCGSL--TRKLFDQYSN-----------------------------WAASAYGN 174
+ MY++CG + RK+FD+ S+ ++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
+ WN +LSG G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ +K+G K+ ++++IDMY K G + ++LFN + I G +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG------LSR 330
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ LVD +A ++F+ + NV W S+I+G N ++ EA+ L +
Sbjct: 331 NGLVD---------KALEMFELFKEQTMEL--NVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+G+ + T S L AC N+ HG V + VGS LID+YA+ G
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGH--GRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ + +F+ +P K++V W+ L+ G + HG +F ++ + + +S+L
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 431 VCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDV 488
C + G K + G + + ++++ + G++ + L K MP E D
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 489 VSWTGIIVGC 498
W ++ C
Sbjct: 558 CVWGALLNSC 567
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q H I+ SG + D + + LI Y+ A + +P + ++S LI TK
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L + + +F M + + ++ ++ KVC+ L++ + GKQ+H G + +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
S+ MY++CG + D +F M ++DVV+ + ++ + G +E + EM S ++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSM 549
N +++ G+LS +G +EA +F +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 128/339 (37%), Gaps = 111/339 (32%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + K GK +HC GL D F ++ MY + DA K+FD M+ K++V+
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVE------------------------------ 102
+ ++ AY +R+ + M E +E
Sbjct: 186 SALLCAYARKGCLEEVVRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 103 -----PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
P+ S+VL + S L++GRLIH + ++ L D +++ ++DMY K G +
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 157 -TRKLFDQYSNWAA---SAYG--------------------------NVALWNSMLSG-- 184
LF+Q+ A +AY NV W S+++G
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 185 --GKQVHAFCVKR-----GFEKEDVTLTS------------------------------- 206
GK + A + R G + VT+ S
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 207 ----LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
LIDMY KCG I+ +FN MP +++V W ++ G
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 53/275 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY------------- 48
D + L G + G+ +H +IK GL +D + ++ MY
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 49 ------------ADFTSLN---------DAHKLFDEMARK-NIVSWTTMVTAYTSNKRPN 86
A T L+ + +LF E + N+VSWT+++ N +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A+ L+ M + V+PN ++L AC L GR H R L + + + L
Sbjct: 371 EALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 147 LDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF---CVKR 195
+DMY KCG +L++ +F+ N+ WNS+++G K+V + ++
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPT------KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+ + ++ TSL+ + G D+G F M E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG ++ G+S H ++ L ++ G+ L+ MYA +N + +F+ M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
KN+V W +++ ++ + + + ++ ++ ++P+ ++++L AC G D G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 125 ----RLIHERITREKLEYDTVLMNTL 146
+ E + +LE+ + ++N L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLL 535
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 199/684 (29%), Positives = 335/684 (48%), Gaps = 88/684 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR ++RS ++ + I ++ N ++ + + DA +LF M R++
Sbjct: 79 LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLIH 128
++ TM+ Y +N R A+ + + P+ F Y+ +L A +S L D+ L
Sbjct: 139 STYNTMLAGYAANGRLPQALSFFRSI-----PRPDSFSYNTLLHALGVSSSLADVRALFD 193
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS--- 183
E ++ + Y N ++ + G SL R FD + + WN ML+
Sbjct: 194 EMPVKDSVSY-----NVMISSHANHGLVSLARHYFD------LAPEKDAVSWNGMLAAYV 242
Query: 184 --GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
G Q E + ++ +L+ Y++ +I++ +FN MP+RDVVSW ++ G
Sbjct: 243 RNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSG 302
Query: 242 ------------CFECS----CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
F+ + FT +A+V Y+ +L EA+++FD A N
Sbjct: 303 YARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFD------AMPDKNAV 356
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN+M++ YV EEA L + C N+ ++N+
Sbjct: 357 SWNAMMAAYVQRRMMEEAKELFDAM-----------------PCRNVASWNT-------- 391
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
++ YA+ G + A +F +P+KD V+W+ ++ ++ G +
Sbjct: 392 ----------------MLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEE 435
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LF++M + VN+ + VL C+ +A+L G Q+H+ +K G+ +L+
Sbjct: 436 TLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLA 495
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG +++ + F+ M ERDVVSW +I G ++G KEA+ F M ++ KP++IT
Sbjct: 496 MYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDIT 555
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+GVL+AC H+GLVE+ + F SM ++G+ EHY CM+DLLG+AG D+A L+ +M
Sbjct: 556 LVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM 615
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF+PD T+W ++L A H N++L AE++ PE+ YV+LSN+YA+ G W +
Sbjct: 616 PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVD 675
Query: 646 KVRKAGKKLGEKK-AGMSWIEVSS 668
K+R + G KK G SWIEV +
Sbjct: 676 KMRHIMHERGVKKVPGFSWIEVQN 699
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 270/488 (55%), Gaps = 27/488 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+HA +K G E + TSLI MY + G ++D +F+ +RDVVS T +I G
Sbjct: 102 GRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG--- 158
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + ARK+FD + +V WN+MI+GYV N EEA+
Sbjct: 159 ------------YASRGDVRSARKVFDXITER------DVVSWNAMITGYVENCGYEEAL 200
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS-GYELDYIVGSNLI 363
L + + + D T S L AC + + ++H L+ G+ + + I
Sbjct: 201 ELFKEMMRTNVRPDEGTLVSVLSACAQ--SGSIELGREIHTLVDDHHGFGSSLKIVNAFI 258
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
LY++ G+V+ A LF L KDVV+W+ LI G T L A LLF++M+ S + N
Sbjct: 259 GLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 318
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ SVL C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 319 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFN 378
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M + + SW +I G +GRA A F M ++ ++P++IT +G+LSAC H+GL++
Sbjct: 379 SMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDL 438
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
IF S+ +Y + P LEHY CM+DLLG AG F +AE++I MP +PD IW S+LKAC
Sbjct: 439 GRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKAC 498
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
+ H N +L A++L+ PE+ YV+LSN+YAT G W+ ++++R+ G KK G
Sbjct: 499 KMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPG 558
Query: 661 MSWIEVSS 668
S IE+ S
Sbjct: 559 CSSIEIDS 566
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 191/446 (42%), Gaps = 77/446 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ ++G+ +H +++K G D + +L+SMYA L DA K+FD +++++
Sbjct: 90 LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYG------------------------------ 99
VS T ++T Y S A ++++ + E
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERI-TREKLEYDTVLMNTLLDMYVKCG--SL 156
+V P+ +VL AC+ SG ++LGR IH + ++N + +Y KCG +
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ S +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 270 ASGLFEGLS------CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSV 323
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A
Sbjct: 324 LPACAHLGAIDIGRWIHVYIDKR--------LKGVTNGSALRTS-LIDMYAKCGDIEAAH 374
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + A L S + +G+ D T L
Sbjct: 375 QVFN------SMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLS 428
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S L G + DY + L IDL G K A E+ H
Sbjct: 429 AC-------SHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481
Query: 382 LP-KKDVVAWSGLIMGCTKHGLNSLA 406
+P + D V W L+ C HG LA
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELA 507
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 36/328 (10%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDL---YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
H +V +G S L++L + A+ +F + +++ W+ ++ G
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
++ M++ N + +LK C+ + G+Q+HA +K G E +
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK-------------- 505
TSLI MY + G ++D +F +RDVVS T +I G G +
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 506 -----------------EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
EA+ F+EM+++ ++P+E T + VLSAC +G +E I T
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ +G L+ + L + G + A L + K D W +++ TH N
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGG-YTHMNLY 298
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+++ Q + S E P+ MLS + A
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPA 326
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKY--GLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
++ L C +I G+ +H I K G++ +L+ MYA + AH++F+
Sbjct: 320 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNS 379
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M K++ SW M+ + + R N A L++ M + G +EP+ +L ACS SG LDL
Sbjct: 380 MMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG-IEPDDITLVGLLSACSHSGLLDL 438
Query: 124 GRLIHERITRE-----KLEYDTVLMNTL 146
GR I + +T++ KLE+ +++ L
Sbjct: 439 GRHIFKSVTQDYNITPKLEHYGCMIDLL 466
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 312/679 (45%), Gaps = 117/679 (17%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H RI+K G D + L++ Y+++ NDA + +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIP-------------------- 77
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+P + +S+++ A + + + R+ L DT +
Sbjct: 78 ----------------DPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDT---HV 118
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
L +++ C L S GKQ+H G + +
Sbjct: 119 LPNLFKVCAEL-----------------------SAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
SL MY++CG + D +F+ M E+DVV T SAL+ Y+ L E
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVV---------------TCSALLCGYARKGCLEE 200
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
++ + N+ WN ++SG+ + ++EA+ + +H G C D T +S
Sbjct: 201 VVRILSEMEKSGIEP--NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSV 258
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV------------- 372
L + + N N Q+HG ++ G D V S ++D+Y + G+V
Sbjct: 259 LPSVGDSENLN--MGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMM 316
Query: 373 ------------------KSALELFHRLPKK----DVVAWSGLIMGCTKHGLNSLAYLLF 410
ALE+F ++ +VV+W+ +I GC ++G + A LF
Sbjct: 317 ETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELF 376
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R+M + N+ I S+L C +A+L G+ H F V+ + ++LIDMY KC
Sbjct: 377 REMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC 436
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G I +F MP +++V W ++ G +G+AKE ++ F+ ++++RLKP+ I+F +L
Sbjct: 437 GRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC GL +E W F M EYG++P LEHY CMV+LLG+AG +A LI E+PF+PD
Sbjct: 497 SACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPD 556
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W ++L +C NN L I A++L PE+P YV++SN+YA GMW + +R
Sbjct: 557 SCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNK 616
Query: 651 GKKLGEKK-AGMSWIEVSS 668
+ LG KK G SWI+V +
Sbjct: 617 MESLGLKKNPGCSWIQVKN 635
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q H I+ SG + D + + LI Y+ A + +P V ++S LI TK
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L S + +F M + + ++ ++ KVC+ L++ + GKQ+H G + +
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL MY++CG + D +F M E+DVV+ + ++ G + G +E + EM +S ++P
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSM 549
N +++ G+LS +G +EA +F M
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKM 243
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 129/350 (36%), Gaps = 111/350 (31%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + + C + + K GK +HC GL D F +L MY + DA K+F
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVF 174
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN---------GF------ 106
D M+ K++V+ + ++ Y +R+ + M E +EPN GF
Sbjct: 175 DRMSEKDVVTCSALLCGYARKGCLEEVVRILSEM-EKSGIEPNIVSWNGILSGFNRSGYH 233
Query: 107 --------------------MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
S+VL + S +L++GR IH + ++ L D +++ +
Sbjct: 234 KEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAM 293
Query: 147 LDMYVKCGSL--TRKLFDQYS--------------------NWAASAYG---------NV 175
LDMY K G + KLFD++ + A +G NV
Sbjct: 294 LDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNV 353
Query: 176 ALWNSMLSG--------------------------------------------GKQVHAF 191
W S+++G G+ H F
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
V+ + ++LIDMY KCG I +FN MP +++V W ++ G
Sbjct: 414 AVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNG 463
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 49/273 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L G ++ G+ +H +IK GL +D + +L MY + KLF
Sbjct: 251 DQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310
Query: 62 DE---------------MARK--------------------NIVSWTTMVTAYTSNKRPN 86
DE ++R N+VSWT+++ N +
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDI 370
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A+ L+ M + V+PN ++L AC L GR H R L D + + L
Sbjct: 371 EALELFREM-QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSAL 429
Query: 147 LDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF---CVKRGF 197
+DMY KCG + K+ N + N+ WNS+++G K+V + ++
Sbjct: 430 IDMYAKCGRI--KMSQIVFNMMPTK--NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRL 485
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+ + ++ TSL+ + G D+G FN M E
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFNMMSEE 518
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG ++ G+S H ++ L D+ G+ L+ MYA + + +F+ M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP 450
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
KN+V W +++ Y+ + + + ++ ++ ++P+ ++++L AC G D G
Sbjct: 451 TKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 125 ----RLIHERITREKLEYDTVLMNTL 146
+ E + +LE+ + ++N L
Sbjct: 510 KYFNMMSEEYGIKPRLEHYSCMVNLL 535
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 283/550 (51%), Gaps = 68/550 (12%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+S L GG Q+H K GF + + +LIDMY+KCGE+D +F M +R+VVSWT +
Sbjct: 17 SSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTAL 76
Query: 239 IV---------GCFEC------------SCFTLSA------------------------- 252
+V GC + +TLSA
Sbjct: 77 MVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAG 136
Query: 253 ----------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
LV +YS + +AR++FD A +A WN+M+SGY +
Sbjct: 137 YQEHDVVASSLVLVYSKGGRIGDARRVFD-----GAGLGSGIATWNAMVSGYAHAGHGRD 191
Query: 303 AITLLSHI--HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--DYIV 358
A+ + + H D +TF S LKAC L +R QVH + SG+ + I+
Sbjct: 192 ALLVFREMRRHEGQHQPDEFTFASLLKACSGL--GATREGAQVHAAMTASGFSTASNAIL 249
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
L+D+Y + + A+++F RL +K+V+ W+ +++G + G + A LFR S
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA 309
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ ++SSV+ V + A + +G+QVH + +K + S++DMYLKCG D+
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAER 369
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F+ M +VVSWT ++ G G++G +EA+A F+EM ++P+E+T+L +LSAC HAGL
Sbjct: 370 MFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGL 429
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E F+ ++ + + P EHY CMVDLLG+AG +A LI MP +P +W ++L
Sbjct: 430 VDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLL 489
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC H + + + LLA ++P YV LSNV A G W KVR A ++ G +K
Sbjct: 490 SACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKK 549
Query: 658 KAGMSWIEVS 667
+ G SW+EV
Sbjct: 550 QGGCSWVEVG 559
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 208/546 (38%), Gaps = 113/546 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I LR + S++ G LH I K G D GNNL+ MY L+ A ++F M
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSWT ++ + + +RL M PN + SA LKAC + GD G
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
IH R + V+ ++L+ +Y K G + R++FD A +A WN+M+S
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFD-----GAGLGSGIATWNAMVS 181
Query: 184 G----------------------------------------------GKQVHAFCVKRGF 197
G G QVHA GF
Sbjct: 182 GYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGF 241
Query: 198 EKED--VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ +L+DMY+KC + + +F + ++V+ WT ++VG
Sbjct: 242 STASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG-------------- 287
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+ Q EA+ L SG
Sbjct: 288 --------------------------------------HAQEGQVTEALELFRRFWRSGA 309
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
DS+ +S + + + +G+ +G D G++++D+Y + G A
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG--TDVSAGNSIVDMYLKCGLPDEA 367
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F + +VV+W+ ++ G KHGL A LF +M + ++ ++L CS
Sbjct: 368 ERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACS-H 426
Query: 436 ASLRRGKQVHAFCVKRG--FEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
A L + + C++R + ++D+ + GE+ + L + MP E V W
Sbjct: 427 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486
Query: 493 GIIVGC 498
++ C
Sbjct: 487 TLLSAC 492
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 45/251 (17%)
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
Q +I+ +L+ + +SLR G Q+H K GF + + +LIDMY+KCGE+D +F
Sbjct: 3 RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSAC------ 533
M +R+VVSWT ++VG ++G A + EM S PNE T L AC
Sbjct: 63 GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDT 122
Query: 534 -----------------------------RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
G + +A +F GL + +
Sbjct: 123 AAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA----GLGSGIATWNA 178
Query: 565 MVDLLGQAGCFDDAEQLIAEM-----PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
MV AG DA + EM +PD+ +AS+LKAC T+ + + + A
Sbjct: 179 MVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTA 238
Query: 620 TSPEDPSKYVM 630
+ S ++
Sbjct: 239 SGFSTASNAIL 249
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/655 (30%), Positives = 317/655 (48%), Gaps = 105/655 (16%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y +VL+ C+ L+ G+ +H I+ + D VL L+ MYV CG L R++FD
Sbjct: 60 YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119
Query: 166 N-----W-----AASAYGN----VALWNSMLSGG------------------------KQ 187
N W + GN V L+ M G K+
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII-------- 239
VH + +K GF + + SLI Y KCGE++ LF+ + +RDVVSW +I
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239
Query: 240 ---------------------------VGCFECSCFTL--------------------SA 252
V C TL +
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNT 299
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+DMYS C L A ++F + + W S+I+ +V + EAI L + S
Sbjct: 300 LLDMYSKCGNLNGANEVFVKMGETT------IVSWTSIIAAHVREGLHYEAIGLFDEMQS 353
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D Y TS + AC + + +VH I + + V + L+++YA+ G++
Sbjct: 354 KGLRPDIYAVTSVVHACACSNSLDK--GREVHNHIKKNNMGSNLPVSNALMNMYAKCGSM 411
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F +LP K++V+W+ +I G +++ L + A LF DM + ++ VL C
Sbjct: 412 EEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPAC 470
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LA+L +G+++H +++G+ + +L+DMY+KCG + LF +P++D++ WT
Sbjct: 471 AGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWT 530
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G G +G KEAI+ F++M + ++P E +F +L AC H+GL++E W +F SMK E
Sbjct: 531 VMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSE 590
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+EP LEHY CMVDLL ++G A + I MP KPD IW ++L C H++ +L
Sbjct: 591 CNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEK 650
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+AE + PE+ YV+L+NVYA W+ + K+++ K G K G SWIEV
Sbjct: 651 VAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEV 705
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 278/497 (55%), Gaps = 36/497 (7%)
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L L GKQVHA G ++ L+DMY KCG + D +F+ M RD+ SW
Sbjct: 130 LKQRALKEGKQVHAHIKTSGSIGLYIS-NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWN 188
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+I G + F +AR LFD+ + + W ++ISG V
Sbjct: 189 IMISGYVKGGNFE---------------KARNLFDKMPNRDNFS------WTAIISGCVQ 227
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS------RFALQVHGLIVTS 350
+ + EEA+ L + + ++ + K I+ S ++HG I+
Sbjct: 228 HNRPEEALELYR-------LMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRM 280
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G + D +V +L+D+Y + G+++ A +F ++ ++DVV+W+ +I K+G + LF
Sbjct: 281 GLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALF 340
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R ++NSN N F + VL C+ LA+ GKQ+HA+ V+ GF+ ++L+ MY KC
Sbjct: 341 RHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKC 400
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G+I++ ++F+ +P+ D+ SWT ++VG Q+G+ +A+ +F+ +++S KP+ I F+GVL
Sbjct: 401 GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVL 460
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC HAGLV++ F S+K ++GL ++HY C++DLL +AG F +AE +I EMP KPD
Sbjct: 461 SACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPD 520
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
K IWA++L C H N +L A+ L PE+P+ YV L+N+YA+ GM + +R+
Sbjct: 521 KYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRET 580
Query: 651 GKKLG-EKKAGMSWIEV 666
G KK GMSWIE+
Sbjct: 581 MDSRGIVKKPGMSWIEI 597
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 193/476 (40%), Gaps = 140/476 (29%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++R++K+GK +H I G S ++ N LL MYA SL DA K+FDEM +++
Sbjct: 126 LKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDL 184
Query: 70 VSWTTMVTAY-------------------------------TSNKRPNWAIRLYNHMLEY 98
SW M++ Y + RP A+ LY M ++
Sbjct: 185 CSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKH 244
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+ N S+ L A + L +G+ IH I R L+ D V+ +LLDMY KCGS+
Sbjct: 245 DYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEE 304
Query: 157 TRKLFDQYS-----NWAASAYG---------NVALWNSMLSG------------------ 184
R +FD+ +W + AL+ +++
Sbjct: 305 ARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACAD 364
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
GKQ+HA+ V+ GF+ ++L+ MY KCG+I++ ++F +P+ D+ SWT +
Sbjct: 365 LAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSL 424
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG Y +
Sbjct: 425 LVG----------------------------------------------------YAQHG 432
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLNFNSRFALQVHGLIVTSG 351
Q+++A+ + SG D F L AC + L F+S + HGL T
Sbjct: 433 QHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHS--IKEKHGLTRT-- 488
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+D+ + +IDL AR G A + + +P K D W+ L+ GC HG LA
Sbjct: 489 --IDHY--ACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELA 540
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 152/335 (45%), Gaps = 41/335 (12%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ LL I I + + LK C+ QVH I TSG + + +
Sbjct: 106 EAVQLLYRIEKPYASI----YLTLLKFCLKQRALKE--GKQVHAHIKTSG-SIGLYISNR 158
Query: 362 LIDLYARL-------------------------------GNVKSALELFHRLPKKDVVAW 390
L+D+YA+ GN + A LF ++P +D +W
Sbjct: 159 LLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSW 218
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSN-QDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ +I GC +H A L+R M + N+ ISS L + + SL GK++H +
Sbjct: 219 TAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIM 278
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ G + +++ SL+DMY KCG I++ +F M ERDVVSWT +I +NGR +E A
Sbjct: 279 RMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFA 338
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ ++ S + PN+ TF GVL+AC + I M G + +V +
Sbjct: 339 LFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYM-VRVGFDSFSSAASALVHMY 397
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+ G ++A+ + +P +PD W S+L H
Sbjct: 398 SKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQH 431
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 36/318 (11%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ GK +H I++ GL D +LL MY S+ +A +FD+M +++VSWTTM+
Sbjct: 266 SLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIH 325
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y N R L+ H++ ++ PN F ++ VL AC+ DLG+ IH + R +
Sbjct: 326 TYLKNGRREEGFALFRHLMN-SNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFD 384
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHA 190
+ + L+ MY KCG + + S + ++ W S+L G K +H
Sbjct: 385 SFSSAASALVHMYSKCGDIE----NAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHF 440
Query: 191 F--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
F +K G + + + ++ G +D GL F+ + E+ ++ T + + C
Sbjct: 441 FELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRT---IDHYAC--- 494
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYS------SWAA-----SAYGNVALWN-SMISGYVL 296
++D+ + EA + ++ WAA +GN+ L + S + +
Sbjct: 495 ----IIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEI 550
Query: 297 NEQNEEAITLLSHIHSSG 314
+N L++I++S
Sbjct: 551 EPENPATYVTLANIYASA 568
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 211/745 (28%), Positives = 335/745 (44%), Gaps = 110/745 (14%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G +H ++K G+ D++ G L+ Y + +A KLF+EM N+VSWT+++ Y+
Sbjct: 864 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 923
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ P + +Y M + G V N ++ V +C L D LG + I + E
Sbjct: 924 DSGNPGEVLNVYQRMRQEG-VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 982
Query: 141 VLMNTLLDMYVKCGSLTRK--LFDQYS-----NWAA--SAYGNVAL---------W---- 178
+ N+L+ M+ S+ +FD + +W A SAY + L W
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042
Query: 179 ----NSM--------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
NS L G+ +H VK G + +L+ +Y + G +D
Sbjct: 1043 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 1102
Query: 221 LALFNFMPERDV-----------------------------------VSWTGIIVGCFEC 245
+F M ERD+ V++ + C
Sbjct: 1103 ELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNP 1162
Query: 246 SCFTLS--------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
C S ALV MY ++ EA+K+ +
Sbjct: 1163 ECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ------PDRV 1216
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI---NLLNFNSRFALQ 342
WN++I G+ NE+ EA+ I G+ + T S L AC +LL + +
Sbjct: 1217 TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL----KHGMP 1272
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H IV +G+E D V ++LI +YA+ G++ S+ +F L K + W+ ++ HG
Sbjct: 1273 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 1332
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A +F +M N +++QF S L + LA L G+Q+H +K GFE + +
Sbjct: 1333 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNA 1392
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+DMY KCGE+ D L + R +SW +I ++G ++A F EM++ KP+
Sbjct: 1393 AMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD 1452
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF+ +LSAC H GLV+E + SM E+G+ P +EH C++DLLG++G AE I
Sbjct: 1453 HVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFI 1512
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
EMP P+ W S+L AC H N +L AE LL P D S YV+ SNV AT G W+
Sbjct: 1513 KEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWE 1572
Query: 643 SLSKVRKA-GKKLGEKKAGMSWIEV 666
+ +RK G +K+ SW+++
Sbjct: 1573 DVENLRKEMGSNNIKKQPACSWVKL 1597
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 278/569 (48%), Gaps = 28/569 (4%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY 164
+Y +L+ C G LIH + D L L+ YVK G + R +FD
Sbjct: 32 LYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGM 91
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
+ V W +M+SG Q FEK V + + +K + G AL
Sbjct: 92 PERS------VVSWTAMVSGYSQ------NGRFEKAFVLFSDMRHCGVKANQFTYGSALR 139
Query: 225 NFMPERDV---VSWTGIIV-GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
R + + G I G F + F SALVD +S C + +A LF
Sbjct: 140 ACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER---- 195
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
+V WN+MI GY + +++ + + G+ D YT S L+A A
Sbjct: 196 --DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAE--GGGLIIA 251
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+HG+I GY IV LI+ YA+ G+++SA +L + KKD+ + + LI G
Sbjct: 252 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 311
Query: 401 GLNSLAYL-LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G+ S+ L LF++M N ++ I+ S+L +C+ LAS G Q+HAF +K +
Sbjct: 312 GIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAM 371
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+LIDMY K GEI+D F M E++V+SWT +I G ++G A++ +++M
Sbjct: 372 GNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGF 431
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
KPN++TFL +L AC H GL E F +M +Y ++P EHY CMVDL + G ++A
Sbjct: 432 KPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAY 491
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
L+ ++ K + ++W ++L A + L A L PE+ YV+L+++Y+ G
Sbjct: 492 NLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAG 551
Query: 640 MWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+WD K+RK ++ KK AG S+ + +
Sbjct: 552 LWDDAWKIRKLMEERSTKKNAGYSFFQAT 580
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 173/700 (24%), Positives = 296/700 (42%), Gaps = 110/700 (15%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK+LH I ++ IF N L++MY+ F ++ A +FDEM +N SW+TM++ Y
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLIHERITREKLEYDT 140
A+ L+ M G VEPNGFM ++++ ACS SG + D G +H + + + D
Sbjct: 823 VGLYEEAVGLFCQMWGLG-VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 881
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------------- 184
+ L+ Y G + +KLF++ + NV W S++ G
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMPDH------NVVSWTSLMVGYSDSGNPGEVLNVY 935
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G QV ++ GFE SLI M+
Sbjct: 936 QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 995
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVG------CFEC-SCF------------------- 248
+++ +F+ M E D++SW +I C E CF
Sbjct: 996 SSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLL 1055
Query: 249 ----------------TLSALVDMYSN---CNVL----CEARKLFDQYSSWAASAYGNVA 285
L + + SN CN L EA + D + A ++
Sbjct: 1056 SVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLI 1115
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVH 344
WNSM++ YV + + + + +L+ + G ++ TF SAL AC N S+ VH
Sbjct: 1116 SWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI---VH 1172
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
LI+ +G+ IVG+ L+ +Y +LG + A ++ +P+ D V W+ LI G ++ +
Sbjct: 1173 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 1232
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSL 463
A ++ + N + SVL CS L+ G +HA V GFE +D SL
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSL 1292
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I MY KCG+++ +F + + ++W ++ +G +EA+ F EM + ++
Sbjct: 1293 ITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQ 1352
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+F G L+A + ++EE + + + G E L +D+ G+ G D +++
Sbjct: 1353 FSFSGGLAATANLAVLEEGQQLH-GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLP 1411
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
+ P + W ++ A H + ++L P+
Sbjct: 1412 Q-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 205/533 (38%), Gaps = 119/533 (22%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L+ C +++ KQG +H +I G D+ L+ Y + A +
Sbjct: 28 LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +++VSWT MV+ Y+ N R A L++ M G V+ N F Y + L+AC+
Sbjct: 88 FDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG-VKANQFTYGSALRACTSLRC 146
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF-------DQYSNWAASAYG 173
LD+G + I + + + + + L+D + KCG + + +W A G
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 206
Query: 174 ---------NVALWNSMLSGG------------------------KQVHAFCVKRGFEKE 200
+ ++ SML GG Q+H + G+
Sbjct: 207 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSY 266
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------- 241
D+ LI+ Y K G + L M ++D+ S T +I G
Sbjct: 267 DIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 326
Query: 242 -----------------CFECSCFTL--------------------SALVDMYSNCNVLC 264
C + F L +AL+DMY+ +
Sbjct: 327 QMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIE 386
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+A++ FD+ NV W S+ISGY + A++L + S G + TF S
Sbjct: 387 DAKRAFDEMEE------KNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLS 440
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALEL 378
L AC S L G + Y + S ++DL+AR G ++ A L
Sbjct: 441 LLFAC-------SHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNL 493
Query: 379 FHRLPKKDVVAWSGLIMGCTK-HGLNSLAYLLFRDMINSNQD--VNQFIISSV 428
++ K + G I+G + +G SL ++ N + VN +++S+
Sbjct: 494 LCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASI 546
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ AL C + + K +H II G + GN L++MY + +A K+
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
M + + V+W ++ + N+ PN A++ Y + E G + N +VL ACS D
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKG-IPANYITMVSVLGACSAPDD 1265
Query: 121 -LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----W----A 168
L G IH I E D + N+L+ MY KCG L + +FD N W A
Sbjct: 1266 LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVA 1325
Query: 169 ASAY----------------------------GNVALWN-SMLSGGKQVHAFCVKRGFEK 199
A+A+ G A N ++L G+Q+H +K GFE
Sbjct: 1326 ANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES 1385
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ + +DMY KCGE+ D L + R +SW +I CF
Sbjct: 1386 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCF 1434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C S G +H +KY S D+ GN L+ MYA + DA +
Sbjct: 332 MDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRA 391
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM KN++SWT++++ Y + + A+ LY M E +PN + ++L ACS +G
Sbjct: 392 FDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKM-ESKGFKPNDVTFLSLLFACSHTGL 450
Query: 121 LDLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW--AASAYGNVAL 177
G + + + ++ + ++D++ + G L ++ N N +L
Sbjct: 451 TAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQG-----LLEEAYNLLCKIDIKHNASL 505
Query: 178 WNSMLSGGKQVHAFCVKRGFE----------KEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
W ++L G ++ + + G E + V L +Y G DD + M
Sbjct: 506 WGAIL-GASSIYGY-MSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLM 563
Query: 228 PER 230
ER
Sbjct: 564 EER 566
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
LK S + S GK +HAFC+ +LI+MY K G I+ +F M R+
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE------A 542
SW+ ++ G + G +EA+ F +M ++PN +++AC +G + +
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + T + + + L H+Y G G +A++L EMP + W S++
Sbjct: 871 FVVKTGILGDVYVGTALVHFY------GSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 211/745 (28%), Positives = 335/745 (44%), Gaps = 110/745 (14%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G +H ++K G+ D++ G L+ Y + +A KLF+EM N+VSWT+++ Y+
Sbjct: 214 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 273
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ P + +Y M + G V N ++ V +C L D LG + I + E
Sbjct: 274 DSGNPGEVLNVYQRMRQEG-VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 332
Query: 141 VLMNTLLDMYVKCGSLTRK--LFDQYS-----NWAA--SAYGNVAL---------W---- 178
+ N+L+ M+ S+ +FD + +W A SAY + L W
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 392
Query: 179 ----NSM--------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
NS L G+ +H VK G + +L+ +Y + G +D
Sbjct: 393 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 452
Query: 221 LALFNFMPERDV-----------------------------------VSWTGIIVGCFEC 245
+F M ERD+ V++ + C
Sbjct: 453 ELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNP 512
Query: 246 SCFTLS--------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
C S ALV MY ++ EA+K+ +
Sbjct: 513 ECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ------PDRV 566
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI---NLLNFNSRFALQ 342
WN++I G+ NE+ EA+ I G+ + T S L AC +LL + +
Sbjct: 567 TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL----KHGMP 622
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H IV +G+E D V ++LI +YA+ G++ S+ +F L K + W+ ++ HG
Sbjct: 623 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 682
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A +F +M N +++QF S L + LA L G+Q+H +K GFE + +
Sbjct: 683 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNA 742
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+DMY KCGE+ D L + R +SW +I ++G ++A F EM++ KP+
Sbjct: 743 AMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD 802
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF+ +LSAC H GLV+E + SM E+G+ P +EH C++DLLG++G AE I
Sbjct: 803 HVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFI 862
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
EMP P+ W S+L AC H N +L AE LL P D S YV+ SNV AT G W+
Sbjct: 863 KEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWE 922
Query: 643 SLSKVRKA-GKKLGEKKAGMSWIEV 666
+ +RK G +K+ SW+++
Sbjct: 923 DVENLRKEMGSNNIKKQPACSWVKL 947
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 173/700 (24%), Positives = 296/700 (42%), Gaps = 110/700 (15%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK+LH I ++ IF N L++MY+ F ++ A +FDEM +N SW+TM++ Y
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL-DLGRLIHERITREKLEYDT 140
A+ L+ M G VEPNGFM ++++ ACS SG + D G +H + + + D
Sbjct: 173 VGLYEEAVGLFCQMWGLG-VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 231
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------------- 184
+ L+ Y G + +KLF++ + NV W S++ G
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDH------NVVSWTSLMVGYSDSGNPGEVLNVY 285
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G QV ++ GFE SLI M+
Sbjct: 286 QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 345
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVG------CFEC-SCF------------------- 248
+++ +F+ M E D++SW +I C E CF
Sbjct: 346 SSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLL 405
Query: 249 ----------------TLSALVDMYSN---CNVL----CEARKLFDQYSSWAASAYGNVA 285
L + + SN CN L EA + D + A ++
Sbjct: 406 SVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLI 465
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVH 344
WNSM++ YV + + + + +L+ + G ++ TF SAL AC N S+ VH
Sbjct: 466 SWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI---VH 522
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
LI+ +G+ IVG+ L+ +Y +LG + A ++ +P+ D V W+ LI G ++ +
Sbjct: 523 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 582
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSL 463
A ++ + N + SVL CS L+ G +HA V GFE +D SL
Sbjct: 583 EAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSL 642
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I MY KCG+++ +F + + ++W ++ +G +EA+ F EM + ++
Sbjct: 643 ITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQ 702
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+F G L+A + ++EE + + + G E L +D+ G+ G D +++
Sbjct: 703 FSFSGGLAATANLAVLEEGQQLH-GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLP 761
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
+ P + W ++ A H + ++L P+
Sbjct: 762 Q-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M+ AL C + + K +H II G + GN L++MY + +A K+
Sbjct: 497 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
M + + V+W ++ + N+ PN A++ Y + E G + N +VL ACS D
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKG-IPANYITMVSVLGACSAPDD 615
Query: 121 -LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----W----A 168
L G IH I E D + N+L+ MY KCG L + +FD N W A
Sbjct: 616 LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVA 675
Query: 169 ASAY----------------------------GNVALWN-SMLSGGKQVHAFCVKRGFEK 199
A+A+ G A N ++L G+Q+H +K GFE
Sbjct: 676 ANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES 735
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ + +DMY KCGE+ D L + R +SW +I CF
Sbjct: 736 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCF 784
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
LK S + S GK +HAFC+ +LI+MY K G I+ +F M R+
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE------A 542
SW+ ++ G + G +EA+ F +M ++PN +++AC +G + +
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + T + + + L H+Y G G +A++L EMP + W S++
Sbjct: 221 FVVKTGILGDVYVGTALVHFY------GSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 212/727 (29%), Positives = 329/727 (45%), Gaps = 121/727 (16%)
Query: 44 LLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP 103
+++ Y L DA KLF ++ N+V+W M++ + AI + + + G
Sbjct: 249 VINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF 161
+ S + SLS L+ G ++H + +E L+ + + + L++MY KC + +++F
Sbjct: 309 RSSLGSVLSAIASLS-MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVF 367
Query: 162 DQYSNWAASAYGNVALWNSMLSG------------------------------------- 184
+ N+ LWN+ML G
Sbjct: 368 NSLGER------NIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACA 421
Query: 185 -------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
G Q+H +K F +L+DMY K G + + F FM D VSW
Sbjct: 422 SLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNA 481
Query: 238 IIVGCFE--------------------------------------------CSCFTL--- 250
IIVG + C C +
Sbjct: 482 IIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVG 541
Query: 251 --------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
S+L+DMY C V+ AR +F YS Y NV N++I+GY ++ EE
Sbjct: 542 LDTSTCAGSSLIDMYVKCGVVLAARDVF--YSM----PYRNVVSINALIAGYTMSHL-EE 594
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSN 361
AI L I G+ TF L C N Q+HG ++ G+ +V +
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN--LGRQIHGQVMKWGFLSSSEMVCVS 652
Query: 362 LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ +Y + LF L K +V W+ LI G + + A ++ M + N
Sbjct: 653 LLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILP 712
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+Q +SVL+ C+ ++SL+ G++VH+ GF ++IT +SLIDMY KCG++ L +F
Sbjct: 713 DQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVF 772
Query: 481 KFMPERD-VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
MP R+ V+SW +IVG +NG A+EA+ F++M Q + P+E+TFLGVLSAC HAG V
Sbjct: 773 HEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRV 832
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E +F M Y L+P ++H CMVD+LG+ G ++AE+ I ++ K D +W+++L
Sbjct: 833 SEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLG 892
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC H + A +L+ P+ S YV+LS +YA W +R+ K G KK
Sbjct: 893 ACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKL 952
Query: 659 AGMSWIE 665
G SWIE
Sbjct: 953 PGYSWIE 959
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 155/607 (25%), Positives = 271/607 (44%), Gaps = 71/607 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + I GK +HC + K G F L+ MYA +L DA +FD +
Sbjct: 149 LSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDT 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWTT++ Y + P A+++++ M G V P+ V+ A G L R +
Sbjct: 209 VSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHV-PDQIALVTVINAYVALGRLADARKLFT 267
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG------SLTRKLFDQYSNWAASAYGNV--ALWN-S 180
+I + V N ++ + K G S +L S+ G+V A+ + S
Sbjct: 268 QIPNP----NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
ML+ G VHA +K G + ++L++MY KC ++D +FN + ER++V W ++
Sbjct: 324 MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G + N
Sbjct: 384 G----------------------------------------------------FAQNGLA 391
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+E + S++ G D +TFTS AC +L + F Q+H +++ + + + V +
Sbjct: 392 QEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLD--FGGQLHTVMIKNKFTSNLFVAN 449
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+YA+ G +K A + F + D V+W+ +I+G + N A+ +FR M+++
Sbjct: 450 ALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLP 509
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++ ++S++ C+ + ++G+Q H VK G + +SLIDMY+KCG + +F
Sbjct: 510 DEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MP R+VVS +I G + +EAI FQE+ LKP E+TF G+L C A ++
Sbjct: 570 YSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN 628
Query: 541 EAWTIFTSMKPEYGLEPHLEHY-YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
I + ++G E ++ + + F D+E L +E+ + +W +++
Sbjct: 629 LGRQIHGQVM-KWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALIS 687
Query: 600 ACETHNN 606
N+
Sbjct: 688 GYAQQNH 694
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 262/566 (46%), Gaps = 60/566 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + G LH +IK + ++F N L+ MYA +L +A K F+ M + VSW
Sbjct: 420 CASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSW 479
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ Y + + A ++ M+ G V P+ ++++ AC+ + G+ H +
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVKEFKQGQQCHCLLV 538
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ L+ T ++L+DMYVKCG + R +F YS Y NV N++++G
Sbjct: 539 KVGLDTSTCAGSSLIDMYVKCGVVLAARDVF--YS----MPYRNVVSINALIAGYTMSHL 592
Query: 185 GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--RDVVSWTGIIV 240
+ +H F + G + +VT L+D C DG + N + V+ W
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLD---GC----DGAFMLNLGRQIHGQVMKW----- 640
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFD--QYSSWAASAYGNVALWNSMISGYVLNE 298
G S +L+ MY N ++ LF QY + +W ++ISGY
Sbjct: 641 GFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPK-------GLVVWTALISGYAQQN 693
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+E+A+ H+ S + D TF S L+AC + + + +VH LI +G+ +D I
Sbjct: 694 HHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQT--GQEVHSLIFHTGFNMDEIT 751
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKD-VVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
S+LID+YA+ G+VK +L++FH +P+++ V++W+ +I+G K+G A +F+ M +
Sbjct: 752 CSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQS 811
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDG 476
++ VL CS + G++V V + L ++D+ + G +++
Sbjct: 812 IIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEA 871
Query: 477 LALF-KFMPERDVVSWTGIIVGCGQNG---RAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
K + D + W+ ++ C ++G R K A E LKP + +LS
Sbjct: 872 EEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLME-----LKPQSSSSYVLLS- 925
Query: 533 CRHAGLVEEA--WTIFTSMKPEYGLE 556
GL E+ W+ S++ E L+
Sbjct: 926 ----GLYAESENWSGADSLRREMKLK 947
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 232/542 (42%), Gaps = 81/542 (14%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN- 166
AVL+A L ++IH + + + +L N ++D+YVKCG++ +K F +
Sbjct: 52 AVLQA------LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKK 105
Query: 167 -----------------WAASAYGNVALWN--------------SMLSG------GKQVH 189
+A V +WN S SG GKQVH
Sbjct: 106 DVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVH 165
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
K GF LIDMY KC + D +F+ D VSWT +I G + F
Sbjct: 166 CGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAG-YVRDGFP 224
Query: 250 LSAL---------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ A+ ++ Y L +ARKLF Q + NV WN
Sbjct: 225 MEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPN------PNVVAWN 278
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK--ACINLLNFNSRFALQVHGL 346
MISG+ EEAI+ + +G+ + S L A +++LN+ S VH
Sbjct: 279 VMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGS----MVHAQ 334
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G + + VGS L+++YA+ + +A ++F+ L ++++V W+ ++ G ++GL
Sbjct: 335 AIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEV 394
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
F M ++F +S+ C+ L L G Q+H +K F +L+DM
Sbjct: 395 MEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDM 454
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G + + F+FM D VSW IIVG Q EA F+ M+ + + P+E++
Sbjct: 455 YAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSL 514
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
++SAC + ++ + + GL+ ++D+ + G A + MP
Sbjct: 515 ASIVSACANVKEFKQGQQCHC-LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Query: 587 FK 588
++
Sbjct: 574 YR 575
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 155/339 (45%), Gaps = 21/339 (6%)
Query: 331 NLLNFNSRFALQ-------VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
NL N + LQ +H + G L ++G+ ++DLY + GNV A + F RL
Sbjct: 44 NLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLE 103
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KKDV AW+ ++ HGL + F M N N+F + VL CS L + GKQ
Sbjct: 104 KKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQ 163
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
VH K GF LIDMY KC + D +F D VSWT +I G ++G
Sbjct: 164 VHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGF 223
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
EA+ F +M + P++I + V++A G + +A +FT + P++ +
Sbjct: 224 PMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-----NPNVVAWN 278
Query: 564 CMVDLLGQAGCFDDAEQLIAEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
M+ + G ++A E+ K ++ S+L A + + S++ Q +
Sbjct: 279 VMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKE 338
Query: 621 SPEDPSKYV--MLSNVYATLGMWDSLSKVRKAGKKLGEK 657
+D + YV L N+YA D+ +V + LGE+
Sbjct: 339 GLDD-NVYVGSALVNMYAKCSKMDAAKQVFNS---LGER 373
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 182/451 (40%), Gaps = 114/451 (25%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L IV A C + KQG+ HC ++K GL G++L+ MY + A +
Sbjct: 512 VSLASIVSA---CANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDV 568
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +N+VS ++ YT + AI L+ + G ++P ++ +L C +
Sbjct: 569 FYSMPYRNVVSINALIAGYTMSHLEE-AIHLFQEIQMVG-LKPTEVTFAGLLDGCDGAFM 626
Query: 121 LDLGRLIHERITREK-LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-NVALW 178
L+LGR IH ++ + L ++ +LL MY+ +++ D + ++ Y + +W
Sbjct: 627 LNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMN----SQRFADSETLFSELQYPKGLVVW 682
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
+++SG G++VH+
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFH 742
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD-VVSWTGIIVGCFECSCFTLSAL 253
GF +++T +SLIDMY KCG++ L +F+ MP R+ V+SW +IVG +
Sbjct: 743 TGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAK--------- 793
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+GY EEA+ + +
Sbjct: 794 --------------------------------------NGYA-----EEALEIFKQMEQQ 810
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGN 371
+ D TF L AC + + +V L+V + Y+L V ++D+ R G
Sbjct: 811 SIIPDEVTFLGVLSACSHAGRVSE--GRKVFDLMVNN-YKLQPRVDHLGCMVDILGRWGF 867
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ A E ++L K D + WS L+ C KHG
Sbjct: 868 LNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/649 (29%), Positives = 319/649 (49%), Gaps = 87/649 (13%)
Query: 20 KQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
K G+ R + + ++FT N LLS A L+D LF M +++IVS+ ++
Sbjct: 53 KAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAG 112
Query: 79 YTSNKRPNWAIRLYNHMLEY-GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ A+R+Y +L+ SV P+ RIT
Sbjct: 113 FSGGGSHAQAVRVYLALLQADSSVRPS-------------------------RIT----- 142
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
M+T++ AASA G+ AL GKQ H ++ GF
Sbjct: 143 -----MSTMV-------------------MAASALGDRAL-------GKQFHCQILRLGF 171
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ L+DMY K + D F+ + ++VV + +I G C
Sbjct: 172 GANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC------------ 219
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
++ EAR+LF+ + + W +M++G+ N EA+ + + G+ I
Sbjct: 220 ---KMVEEARRLFEVMTDR------DSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAI 270
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D YTF S L AC L Q+H I+ + Y+ + VGS L+D+Y++ ++K A
Sbjct: 271 DQYTFGSILTACGALSALEQ--GKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAET 328
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F R+ K++++W+ LI+G ++G + A +F +M D + + + SV+ C+ LAS
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L G Q H + G +L+ +Y KCG I+D LF M D VSWT ++ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q GRAKE I F++M+ +KP+ +TF+GVLSAC AG VE+ + F SM+ ++G+ P
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP 508
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+HY CM+DL ++G +AE+ I +MP PD W ++L AC + ++ AE L
Sbjct: 509 IDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENL 568
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
L P++P+ YV+L +++A G W+ ++++R+ + + +K+ G SWI+
Sbjct: 569 LEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIK 617
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 208/448 (46%), Gaps = 56/448 (12%)
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
L L+ Y K G +F+ MP ++ FT +AL+ + L
Sbjct: 44 LNHLLTAYGKAGRHARARRVFDAMPHPNL---------------FTYNALL------STL 82
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTF 322
AR L D + +A+ ++ +N++I+G+ + +A+ + L+ + + S
Sbjct: 83 AHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRIT 142
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL---GNVKSALE-- 377
S + + L + Q H I+ G+ + VGS L+D+YA++ G+ K A +
Sbjct: 143 MSTMVMAASALG-DRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEV 201
Query: 378 --------------------------LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
LF + +D + W+ ++ G T++GL S A +FR
Sbjct: 202 DSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFR 261
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M ++Q+ S+L C L++L +GKQ+HA+ ++ ++ ++L+DMY KC
Sbjct: 262 RMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCR 321
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
I +F+ M ++++SWT +IVG GQNG ++EA+ F EM + + P++ T V+S
Sbjct: 322 SIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVIS 381
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
+C + +EE F + GL ++ +V L G+ G +DA +L EM F D+
Sbjct: 382 SCANLASLEEG-AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQ 439
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLA 619
W +++ K + E++LA
Sbjct: 440 VSWTALVSGYAQFGRAKETIDLFEKMLA 467
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG +++QGK +H II+ ++F G+ L+ MY+ S+ A +F M KNI
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT ++ Y N A+R+++ M G ++P+ + +V+ +C+ L+ G H
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDG-IDPDDYTLGSVISSCANLASLEEGAQFHC 397
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
L + + N L+ +Y KCGS+ +LFD+ S + + W +++SG Q
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS------FHDQVSWTALVSGYAQ 451
Query: 188 -------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ F + +G + + VT ++ + G ++ G + F+ M ++D GI
Sbjct: 452 FGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSM-QKD----HGI 506
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+ +C ++D+YS L EA + Q
Sbjct: 507 VPIDDHYTC-----MIDLYSRSGKLKEAEEFIKQ 535
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 325/662 (49%), Gaps = 60/662 (9%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTG--NNLLSMYADFTSLNDAHKLFDEMAR 66
AL R +LHC I++ L T N+LL+ Y A ++FD
Sbjct: 11 ALLSAAARTEPHAAGALHCVILRT-LPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPH 69
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
N+ ++ +++ + + L+ M + +V Y+AV+ S G
Sbjct: 70 PNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVS-----YNAVIAGFSGGG------- 117
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW--AASAYGNVALWNSMLSG 184
H R R L +TLL + GS R S AASA G+ AL
Sbjct: 118 AHARAVR--------LYHTLL----RAGSSVRPSRITMSAMVMAASALGDRAL------- 158
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q H ++ GF + L+ MY K G I D +F+ M ++VV + +I G
Sbjct: 159 GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLR 218
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
C ++ EAR+LF+ + + W +M++G+ N +A+
Sbjct: 219 C---------------KMVEEARRLFEVMTDR------DCITWTTMVTGFTQNGLESQAL 257
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ G+ ID YTF S L AC L Q+H I+ + Y+ + VGS L+D
Sbjct: 258 NFFRRMRFQGIAIDQYTFGSILTACGALSALEQ--GKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y++ ++K A F R+ K++++W+ LI+G ++G + A +F +M D + F
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ SV+ C+ LASL G Q H + G +L+ +Y KCG I+D LF M
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D VSWT ++ G Q GRAKE I F++M+ +KP+ +TF+GVLSAC AG VE+ +
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F SM+ ++G+ P +HY CM+DL ++G +AE+ I +MP PD W ++L AC
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSW 663
+ ++ AE LL P++P+ YV+L +++AT G W+ ++++R+ + + +K+ G SW
Sbjct: 556 GDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSW 615
Query: 664 IE 665
I+
Sbjct: 616 IK 617
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 209/703 (29%), Positives = 341/703 (48%), Gaps = 99/703 (14%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
++ ++ ++ T N+++S +A ++DA +LFD M ++NIVSW +M+ AY N R
Sbjct: 36 KVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEE 95
Query: 88 AIRLYNHMLEYGSVEPNGFMYS-AVLKAC-SLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A +L++ M P +YS ++ C + +G+L R + + +++ V N
Sbjct: 96 ARQLFDKM-------PTRDLYSWTLMITCYTRNGELAKARNLFNLLP---YKWNPVCCNA 145
Query: 146 LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----E 198
++ Y K R+LFD A ++ WNSML+G + + F E
Sbjct: 146 MVAGYAKNRQFDEARRLFD------AMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAE 199
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
++ V+ ++D +++ G+++ F +P + VSW ++ G ++
Sbjct: 200 RDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCG---------------FA 244
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG---- 314
+ EAR+LFDQ NV WN+MI+ YV N +EAI+L +
Sbjct: 245 RFGKIAEARRLFDQMP------IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISW 298
Query: 315 -MCIDSYTFTSALKACINLLNF------------------NSRF--ALQVHGLI------ 347
I+ Y L LLN N R A Q+ I
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVV 358
Query: 348 ----VTSGY-----------------ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+ +GY + D + + ++ YA++G + +A+++F + +K+
Sbjct: 359 CWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKN 418
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ LI G T++G A F M + Q +Q + L C+ LA+L+ GKQ+H
Sbjct: 419 IVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQ 478
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K G+ + +LI MY KCG I LFK + DVVSW +I NG +E
Sbjct: 479 LVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGRE 538
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M + P+E+TF+G+LSAC H GL+++ +F M Y +EP EHY CMV
Sbjct: 539 ALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMV 598
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AG ++A QL+ M + IW ++L AC H N +L AE+LL P S
Sbjct: 599 DLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTS 658
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN+ A G WD +++VR+ K+ G EK+ G SWIE+ +
Sbjct: 659 NYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQN 701
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 13/231 (5%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C +++ GK LH ++K G + D+F N L++MYA S++ A LF ++ +
Sbjct: 460 GLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFD 519
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLI 127
+VSW +++ AY N A++L+ H +E V P+ + +L ACS G +D G +L
Sbjct: 520 VVSWNSLIAAYALNGNGREALKLF-HKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLF 578
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS---- 183
+ +E ++D+ + G L + F +A N +W ++L
Sbjct: 579 KCMVQAYNIEPLAEHYACMVDLLGRAGRL-EEAFQLVRGMKINA--NAGIWGALLGACRI 635
Query: 184 -GGKQVHAFCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPER 230
G ++ F ++ E E ++ + +M + G D+ + M E+
Sbjct: 636 HGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEK 686
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 32/168 (19%)
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
K G+ID+ + +F+ M ++ V+ +I +NGR +A F M Q N +++
Sbjct: 27 KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQR----NIVSWNS 82
Query: 529 VLSACRHAGLVEEAWTIFTSMKPE------------------------YGLEPHLEHYYC 564
+++A H VEEA +F M + L P+ + C
Sbjct: 83 MIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVC 142
Query: 565 ---MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
MV + FD+A +L MP K D W SML + +L
Sbjct: 143 CNAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRL 189
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 336/659 (50%), Gaps = 42/659 (6%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H + K GL +++ G+ L++MYA + ++ A ++F+ + +NIV W M+ +
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + ++ M +G +P+ F ++++ AC+ L+ G +H + + K +
Sbjct: 388 NGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH----AF---- 191
+ N L+DMY K G+L RK F+ + NV+ WN+++ G Q AF
Sbjct: 447 VANALVDMYAKSGALKEARKQFE-----LMKIHDNVS-WNAIIVGYVQEEYNDEAFFMFR 500
Query: 192 -CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
V G ++V+L S++ E+ G + + VG +C
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLL----------VKVGLDTSTC-AG 549
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S+L+DMY C V+ AR +F S NV N++I+GY + EEAI L I
Sbjct: 550 SSLIDMYVKCGVVLAARDVFYSMPS------RNVVSVNALIAGYTMGHL-EEAIHLFQEI 602
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNLIDLYARL 369
G+ TF L C N Q+HG ++ G+ +V +L+ LY
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLN--LGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNS 660
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
+ LF L K +V W+ LI G + + A ++ M + N +Q +SV
Sbjct: 661 QRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASV 720
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD- 487
L+ C+ ++SL+ G+++H+ GF +++T +SLIDMY KCG++ L +F+ MP R+
Sbjct: 721 LRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNN 780
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+SW +IVG +NG A+EA+ F++M Q + P+E+TFLGVLSAC HAG V E +F
Sbjct: 781 VISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFD 840
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
M Y L P ++H CMVD+LG+ G ++AE+ I ++ K D +W+++L AC H +
Sbjct: 841 LMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDE 900
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
A++L+ P+ S YV+LS++YA W +R+ K G KK G SWIE
Sbjct: 901 VRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 166/657 (25%), Positives = 283/657 (43%), Gaps = 85/657 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +HC + K G F L+ MYA L DA +FD +
Sbjct: 149 LSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDT 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT ++ Y + P A+++++ M G P+ V+ A G L R +
Sbjct: 209 VSWTALIAGYVRDGFPMEAVKVFDRMQRVGHA-PDQITLVTVVNAYVALGRLADARKLFT 267
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG------SLTRKLFDQYSNWAASAYGNV--ALWN-S 180
+I + V N ++ + K G S +L S+ G+V A+ + S
Sbjct: 268 QIPNP----NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
ML+ G VHA K G + ++L++MY KC ++D +FN + ER++V W ++
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 241 G------------CFEC------------------------------------------- 245
G F C
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F +ALVDMY+ L EARK F+ + NV+ WN++I GYV E N+EA
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFE-----LMKIHDNVS-WNAIIVGYVQEEYNDEAFF 497
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ + S+G+ D + S + AC N+ + Q H L+V G + GS+LID+
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQEL--KRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G V +A ++F+ +P ++VV+ + LI G T L A LF+++ +
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEE-AIHLFQEIQMVGLKPTEVTF 614
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGF-EKEDITLTSLIDMYLKCGEIDDGLALF-KFM 483
+ +L C L G+Q+H +K GF ++ SL+ +Y+ D LF +
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+ +V WT +I G Q ++A+ ++Q M + P++ F VL AC ++
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
Query: 544 TIFTSMKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I + + + +++ C ++D+ + G + Q+ EMP + + W SM+
Sbjct: 735 EIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/657 (23%), Positives = 298/657 (45%), Gaps = 84/657 (12%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+++ K +H + +K G+ GN ++ +Y +++ A K F + +K++ +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 77 TAYTSNKRPNWAIR----LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+ Y + ++ ++NH V PN F ++ VL ACS D++ GR +H +
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNH-----EVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVF 169
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
+ + + L+DMY KC L R +FD N + W ++++G G
Sbjct: 170 KTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNL------DTVSWTALIAGYVRDGF 223
Query: 187 QVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ A V + G + +TL ++++ Y+ G + D LF +P +VV+W +I G
Sbjct: 224 PMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISG 283
Query: 242 --------------------CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ + +L +++ ++ ++L + Q +
Sbjct: 284 HAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLD-- 341
Query: 282 GNVALWNSMISGY-----------VLNEQNEEAITL----LSHIHSSGMCIDSYTFTSAL 326
NV + +++++ Y V N E I L L +G+ + F S +
Sbjct: 342 DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCM 401
Query: 327 K----------------ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
K AC +L N F Q+H +++ + + + V + L+D+YA+ G
Sbjct: 402 KRHGPQPDEFTFTSIFSACASLHYLN--FGGQLHTVMIKNKFASNLFVANALVDMYAKSG 459
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+K A + F + D V+W+ +I+G + N A+ +FR M+++ ++ ++S++
Sbjct: 460 ALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ + L+RG+Q H VK G + +SLIDMY+KCG + +F MP R+VVS
Sbjct: 520 ACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVS 579
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+I G G +EAI FQE+ LKP E+TF G+L C A ++ I +
Sbjct: 580 VNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM 638
Query: 551 PEYGLEPHLEHY-YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++G E ++ L + F D+E L +E+ + +W +++ N+
Sbjct: 639 -KWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNH 694
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 245/523 (46%), Gaps = 50/523 (9%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + G LH +IK + ++F N L+ MYA +L +A K F+ M + VSW
Sbjct: 420 CASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSW 479
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ Y + + A ++ M+ G V P+ ++++ AC+ +L G+ H +
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVQELKRGQQCHCLLV 538
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ L+ T ++L+DMYVKCG + R +F YS + NV N++++G
Sbjct: 539 KVGLDTSTCAGSSLIDMYVKCGVVLAARDVF--YSMPSR----NVVSVNALIAGYTMGHL 592
Query: 185 GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--RDVVSWTGIIV 240
+ +H F + G + +VT L+D C DG + N + V+ W
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLD---GC----DGAFMLNLGRQIHGQVMKW----- 640
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFD--QYSSWAASAYGNVALWNSMISGYVLNE 298
G S +L+ +Y N ++ LF QY + +W ++ISGY
Sbjct: 641 GFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPK-------GLVVWTALISGYAQQN 693
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+E+A+ H+ S + D F S L+AC + + + ++H LI +G+ +D +
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQN--GQEIHSLIFHTGFNMDEVT 751
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
S+LID+YA+ G+VK +L++F +P++ +V++W+ +I+G K+G A +F+ M +
Sbjct: 752 CSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQS 811
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK--RGFEKEDITLTSLIDMYLKCGEIDD 475
++ VL CS + G++V V + + D L ++D+ + G +++
Sbjct: 812 IIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVD-HLGCMVDILGRWGFLNE 870
Query: 476 GLALF-KFMPERDVVSWTGIIVGCGQNG---RAKEAIAYFQEM 514
K + D + W+ ++ C ++G R K A E+
Sbjct: 871 AEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMEL 913
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 14/320 (4%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H + G L ++G+ ++DLY + GNV A + F RL KKDV AW+ ++ HGL
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ F M N N+F + VL CS L + G+QVH K GF
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LIDMY KC + D +F D VSWT +I G ++G EA+ F M + P+
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+IT + V++A G + +A +FT + P++ + M+ + G ++A
Sbjct: 243 QITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGFAEEAISFF 297
Query: 583 AEMP---FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYAT 637
E+ K ++ S+L A + + S++ Q +D + YV L N+YA
Sbjct: 298 LELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD-NVYVGSALVNMYAK 356
Query: 638 LGMWDSLSKVRKAGKKLGEK 657
D+ +V + LGE+
Sbjct: 357 CSKMDAAKQVFNS---LGER 373
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D LR C S++ G+ +H I G + D T ++L+ MYA + + ++F
Sbjct: 713 DQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVF 772
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
EM R+ N++SW +M+ N A+ ++ M E S+ P+ + VL ACS +G
Sbjct: 773 REMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM-EQQSIIPDEVTFLGVLSACSHAGR 831
Query: 121 LDLGRLIHE 129
+ GR + +
Sbjct: 832 VSEGRKVFD 840
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K L +L K +H+ +K G + + ++D+Y+KCG +D F + ++DV
Sbjct: 49 KPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+W ++ +G + F M ++PNE TF VLSAC
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSAC 152
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 212/761 (27%), Positives = 354/761 (46%), Gaps = 123/761 (16%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KN 68
R ++ + + +H +I GL S D F+G L+ Y+ F + +F ++ KN
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +++ A++ N A+ Y + E V P+ + + +V+KAC+ D ++G L++
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
E+I E D + N L+DMY + G LTR ++FD+ ++ WNS++SG
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM------PVRDLVSWNSLISGYS 183
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ +H F +K G V
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-------------------F 243
L+ MYLK D +F+ M RD VS+ +I G F
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF 303
Query: 244 ECSCFTLSA-----------------------------------LVDMYSNCNVLCEARK 268
+ T+S+ L+D+Y+ C + AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F+ + WNS+ISGY+ + EA+ L + D T+ +
Sbjct: 364 VFNSMEC------KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
L + +F +H + SG +D V + LID+YA+ G V +L++F + D V
Sbjct: 418 STRLADL--KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSN--QDVNQFIISSVLKVCSCLASLRRGKQVHA 446
W+ +I C + G + + M S D+ F+++ L +C+ LA+ R GK++H
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT--LPMCASLAAKRLGKEIHC 533
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ G+E E +LI+MY KCG +++ +F+ M RDVV+WTG+I G G ++
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M +S + P+ + F+ ++ AC H+GLV+E F MK Y ++P +EHY C+V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLL ++ AE+ I MP KPD +IWAS+L+AC T + + ++ +++ +P+DP
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
++ SN YA L WD +S +RK+ K K K G SWIEV
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 199/509 (39%), Gaps = 121/509 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + LR CG R + K ++ ++K G + N L+ +YA + A +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M K+ VSW ++++ Y + A++L+ M+ + + Y ++ + DL
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADL 424
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ +H + + D + N L+DMY KCG + D +++ G+ WN++
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG----DSLKIFSSMGTGDTVTWNTV 480
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+S GK++H ++ G+
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E E +LI+MY KCG +++ +F M RDVV+WTG+I
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI------------------ 582
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+A YG + E+A+ + + SG+
Sbjct: 583 ------------------YAYGMYG----------------EGEKALETFADMEKSGIVP 608
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLI----VTSGYELDYIVG--SNLIDLYARLGN 371
DS F + + AC S L GL + + Y++D ++ + ++DL +R
Sbjct: 609 DSVVFIAIIYAC-------SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A E +P K D W+ ++ C G A + R +I N D + I +
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILA--- 718
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+ A+LR+ +V +++ + + IT
Sbjct: 719 -SNAYAALRKWDKVS--LIRKSLKDKHIT 744
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
V+ IS L S L LRR +HA + G + D LID Y E L++
Sbjct: 5 VSSPFISRALSSSSNLNELRR---IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSV 61
Query: 480 FKFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F+ + P ++V W II +NG EA+ ++ ++ +S++ P++ TF V+ AC AGL
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGL 119
Query: 539 VE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+ E + + G E L +VD+ + G A Q+ EMP + D W S+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSL 178
Query: 598 LKACETH 604
+ +H
Sbjct: 179 ISGYSSH 185
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 267/487 (54%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G+E + TSLI MY+K G D +F+ RDVVS+T +I G
Sbjct: 122 GQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG--- 178
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN++ISGY N+EA+
Sbjct: 179 ------------YASRGYIESAQKMFDEI------PVKDVVSWNAIISGYADTGNNKEAL 220
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + + QVH I G + + + LID
Sbjct: 221 DLFKEMMKTNVKPDESTMVTVVSACAQ--SGSIQLGRQVHSWIDDHGLGSNLKIVNALID 278
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A LF L KDV++W+ +I G T L A LLF++M+ S ++ N
Sbjct: 279 LYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVT 338
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 339 MLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 398
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M R + + +I G +GRA A F M ++ ++P++ITF+G+LSAC H+G+++
Sbjct: 399 MHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM Y + P LEHY CM+DLLG G F +AE++I M +PD IW S+LKAC+
Sbjct: 459 RRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACK 518
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A++L+ PE+P YV+LSN+YAT G W+ ++ +R G KK G
Sbjct: 519 MHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGC 578
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 579 SSIEIDS 585
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 164/335 (48%), Gaps = 34/335 (10%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ AI L + S G+ +SYTF LK+C L S+ Q
Sbjct: 67 NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV--SKEGQQ 124
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GYELD V ++LI + YA G
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
++SA ++F +P KDVV+W+ +I G G N A LF++M+ +N ++ + +V+
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S++ G+QVH++ G + +LID+Y KCGE++ LF+ + +DV+SW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L +L AC G ++ W K
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
G+ ++D+ + G + A Q+ M
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 72/438 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + K+G+ +H ++K G D++ +L+SMY DAHK+FD + +++
Sbjct: 110 LKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDV 169
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 170 VSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT 229
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V+P+ V+ AC+ SG + LGR +H I L + ++N L+D+Y KCG +
Sbjct: 230 -NVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF SN +V WN+M+ G ++ + ++ G DVT+ S+
Sbjct: 289 ACGLFQGLSN------KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSI 342
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ + G ID G + ++ +R I G S S L+DMY+ C + A
Sbjct: 343 LPACAQLGAIDFGRWIHVYIDKR--------IKGVTNASSLRTS-LIDMYAKCGDIEAAH 393
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ SA N+MI G+ ++ + A + S + +G+ D TF L
Sbjct: 394 QVFNSMHHRTLSA------CNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 447
Query: 328 ACIN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
AC + +L+ R F +T E Y +IDL LG K A E+ + +
Sbjct: 448 ACSHSGMLDLGRRIFRSMTQNYKITPKLE-HY---GCMIDLLGHLGLFKEAEEMINTMTM 503
Query: 384 KKDVVAWSGLIMGCTKHG 401
+ D V W L+ C HG
Sbjct: 504 EPDGVIWCSLLKACKMHG 521
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 136/608 (22%), Positives = 238/608 (39%), Gaps = 180/608 (29%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + LL + +F L A +F+ + N++ W
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWN 72
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P AI+LY M+ G + PN + + +LK+C+ G+ IH + +
Sbjct: 73 TMFRGHALSSDPVSAIKLYVCMISLGLL-PNSYTFPFLLKSCAKLKVSKEGQQIHGHVLK 131
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------- 172
E D + +L+ MYVK G K+FD S+ +A+ Y
Sbjct: 132 LGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKM 191
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+++SG
Sbjct: 192 FDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSI 251
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH++ G + +LID+Y KCGE++ LF + +DV+SW +I G
Sbjct: 252 QLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGG- 310
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ EA LF + + SG +N
Sbjct: 311 --------------YTHLNLYKEALLLFQEM----------------LRSG-----ENPN 335
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINL--LNFNSRFALQVHGLI--VTSGYELDYIV 358
+T+L S L AC L ++F + + I VT+ L
Sbjct: 336 DVTML----------------SILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLR--- 376
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++LID+YA+ G++++A ++F+ + + + A + +I G HG + A+ +F M
Sbjct: 377 -TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRM----- 430
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
K G E +DIT L+ G +D G
Sbjct: 431 ------------------------------RKNGIEPDDITFVGLLSACSHSGMLDLGRR 460
Query: 479 LFKFMPERDVVSWTGIIVGC-----GQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSA 532
+F+ M + ++ GC G G KEA +EMI + ++P+ + + +L A
Sbjct: 461 IFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEA----EEMINTMTMEPDGVIWCSLLKA 516
Query: 533 CRHAGLVE 540
C+ G VE
Sbjct: 517 CKMHGNVE 524
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S L++ L + A+ +F + + +++ W+ + G
Sbjct: 21 IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRG--- 77
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ L + G+Q+H +K G+E +
Sbjct: 78 HALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELD 137
Query: 457 DITLTSLIDMYLKCGE-------------------------------IDDGLALFKFMPE 485
TSLI MY+K G I+ +F +P
Sbjct: 138 LYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPV 197
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+DVVSW II G G KEA+ F+EM+++ +KP+E T + V+SAC +G ++ +
Sbjct: 198 KDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQV 257
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++GL +L+ ++DL + G + A L + K D W +M+ TH
Sbjct: 258 HSWID-DHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMIGG-YTHL 314
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E+P+ MLS
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLS 341
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +GL ++ N L+ +Y+ + A LF
Sbjct: 234 DESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLF 293
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ K+++SW TM+ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 294 QGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGE-NPNDVTMLSILPACAQLGAI 352
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D GR IH I + + + + L +L+DMY KCG + ++F+ + SA
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSA------ 406
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
N+M+ G G+ AF + K G E +D+T L+ G +D G +F M
Sbjct: 407 CNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMT 466
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
+ ++ GC ++D+ + + EA ++ + + W A
Sbjct: 467 QNYKITPKLEHYGC----------MIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKA 516
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GNV L S + + +N + LLS+I+++
Sbjct: 517 CKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATA 554
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 323/641 (50%), Gaps = 39/641 (6%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++IF+ N +LS Y+ L A LF +N +WT M+ A+ + R + A+ L+ M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 96 LEYGSVEPNGFMYSAVL--KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
L G V P+ + VL C++ +H + L+ + NTLLD Y K
Sbjct: 132 LGEG-VIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKH 183
Query: 154 GSLT--RKLFDQYSNWAASAYGNVALWNS---MLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
G L R++F + + A Y + + S + + Q+ A + G T +S++
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243
Query: 209 DMYLKCGEIDDGLA--LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+ G+A L V+ T ++ + F ++L+D YS C+ L +
Sbjct: 244 -------TVAAGMAHLLLGHQVHALVLRSTSVL------NVFVNNSLLDFYSKCDCLDDM 290
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R+LFD+ NV+ +N +I+ Y N+ + L + G + + L
Sbjct: 291 RRLFDEMPE-----RDNVS-YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+L + + Q+H +V G + ++G+ LID+Y++ G + +A F +K
Sbjct: 345 SVAGSLPDVH--IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
++W+ LI G ++G + A LF DM + ++ SS++K S LA + G+Q+H+
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ ++ G++ + + L+DMY KCG +D+ L F MPER+ +SW +I G AK
Sbjct: 463 YLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 522
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
AI F+ M+ P+ +TFL VL+AC H GL +E F MK +Y + P EHY C++
Sbjct: 523 AIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVI 582
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D LG+ GCF ++++ EMPFK D IW S+L +C H N +L + A++L P D +
Sbjct: 583 DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDAT 642
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+YA G W+ + V+K + G K++G SW+E+
Sbjct: 643 PYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEI 683
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/556 (25%), Positives = 223/556 (40%), Gaps = 111/556 (19%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH IK+GL +F N LL Y L A ++F EM K+ V++ M+ +
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A++L+ M G + F +S++L + L LG +H + R + +
Sbjct: 216 LHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVN 274
Query: 144 NTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG--------------------- 173
N+LLD Y KC L R+LFD+ N +AY
Sbjct: 275 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 334
Query: 174 -NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
V + +MLS GKQ+HA V G ED+ +LIDMY KCG +D +
Sbjct: 335 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ E+ +SWT +I G
Sbjct: 395 FSNRSEKSAISWTALITG------------------------------------------ 412
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
YV N Q+EEA+ L S + +G+ D TF+S +KA +L Q+
Sbjct: 413 ----------YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGRQL 460
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H ++ SGY+ GS L+D+YA+ G + AL F +P+++ ++W+ +I +G
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCS-------CLASLRRGKQVHAFCVKRGFEKE 456
A +F M++ + + SVL CS C+ K H + + E
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKEH- 577
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ID + G + MP + D + WT I+ C +G + A ++
Sbjct: 578 ---YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634
Query: 516 QSRLKPNEITFLGVLS 531
++P + T +LS
Sbjct: 635 G--MEPTDATPYVILS 648
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 182/444 (40%), Gaps = 61/444 (13%)
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
VK GF+ L + L G + A+F+ MP +++ F+L+
Sbjct: 35 VKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNI---------------FSLNL 79
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
++ YS+ L A+ LF +S + N W M+ + + +A++L +
Sbjct: 80 ILSAYSSSGDLPAAQHLF------LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D T T+ +LN +H + G + V + L+D Y + G +
Sbjct: 134 EGVIPDRVTVTT-------VLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+A +F + KD V ++ ++MGC+K GL++ A LF M + F SS+L V
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ +A L G QVHA ++ SL+D Y KC +DD LF MPERD VS+
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFT 547
II N A + F+EM + + + +LS H G A +
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 548 SMKPEYGLEPHLEHYYCMVDLLG-------------------------QAGCFDDAEQLI 582
+ E L L Y +L Q G ++A QL
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426
Query: 583 AEMP---FKPDKTIWASMLKACET 603
++M +PD+ ++S++KA +
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSS 450
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 187/485 (38%), Gaps = 114/485 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H +++ ++F N+LL Y+ L+D +LFDEM ++ VS+ ++ AY
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N+ +RL+ M + G + Y+ +L D+ +G+ IH ++ L + +
Sbjct: 315 NQCAATVLRLFREMQKLG-FDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV------------------- 175
L N L+DMY KCG L + F S +W A G V
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433
Query: 176 -----ALWNS---------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
A ++S M+ G+Q+H++ ++ G++ + + L+DMY KCG +D+ L
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ MPER+ +SW +I
Sbjct: 494 RTFDEMPERNSISWNAVI------------------------------------------ 511
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSR 338
S Y + + AI + + G DS TF S L AC +
Sbjct: 512 ----------SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGC 397
F L H ++ E V ID R+G ++ +P K D + W+ ++ C
Sbjct: 562 FHLMKHQYSISPWKEHYACV----IDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSC 617
Query: 398 TKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-----R 451
HG LA + + D ++I S + R G+ A CVK R
Sbjct: 618 RIHGNQELARVAADKLFGMEPTDATPYVILSNIYA-------RAGQWEDAACVKKIMRDR 670
Query: 452 GFEKE 456
G KE
Sbjct: 671 GVRKE 675
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 28/251 (11%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G + GK +H +++ GL+ + GN L+ MY+ L+ A F + K+ +SWT
Sbjct: 348 GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 407
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
++T Y N + A++L++ M G + P+ +S+++KA S + LGR +H + R
Sbjct: 408 ALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSG----GKQ 187
+ + L+DMY KCG L L FD+ N WN+++S G+
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE------RNSISWNAVISAYAHYGEA 520
Query: 188 VHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-----WTG 237
+A + GF + VT S++ G D+ + F+ M + +S +
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580
Query: 238 II-----VGCF 243
+I VGCF
Sbjct: 581 VIDTLGRVGCF 591
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
I G+ LH +I+ G +F+G+ L+ MYA L++A + FDEM +N +SW +++A
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD-----LGRLIHERITR 133
Y AI+++ ML G P+ + +VL ACS +G D + H+
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV 193
E+ +++TL V C S +K+ + A L + + G +++
Sbjct: 573 PWKEHYACVIDTL--GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAA 630
Query: 194 KR--GFEKEDVT-LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ G E D T L ++Y + G+ +D + M +R V +G
Sbjct: 631 DKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 677
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 324/660 (49%), Gaps = 66/660 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +I + + + +I + + IF N + Y + L+DA +LF+EM +++ SW
Sbjct: 70 CSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSW 129
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+TAY A+ L++ M G + N +++VL +C+ L L + IH I
Sbjct: 130 NAMITAYAQGGCAEKALWLFSRMNRLG-IWANEITFASVLGSCATVLALFLSKQIHGLIV 188
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAY------------------ 172
+ ++ +L ++L+D+Y KC ++ R++FD+ N A ++
Sbjct: 189 KYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVV 248
Query: 173 -------GNVALWN-------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
N+ N S L G Q+H ++ G+++++V +SLIDMY
Sbjct: 249 MFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYA 308
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG+++ +F ++++SWT I+ G Y+ EAR LFD+
Sbjct: 309 KCGDLESACRIFELPSSKNLISWTSIVSG---------------YAMSGQTREARVLFDE 353
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+V WN+M++GY Q EEA+ + + + ID T L C L
Sbjct: 354 MPE------RSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGL 407
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWS 391
+ S QVHG I G + VG+ L+ +Y + GN++S F+++ +D ++W+
Sbjct: 408 SDVES--GKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWN 465
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ +HGL+ A +F +M ++F + ++L C+ + +L +GKQ+H F ++
Sbjct: 466 ALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRN 524
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+E + + +L+DMY KC ++ L +FK P RD++ W +I+GC NGR ++ + F
Sbjct: 525 GYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLF 584
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M + +KP+ ITF G+L C GL F SM +Y + P LEHY M++L G+
Sbjct: 585 GLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGR 644
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G D+ E I MPF+P + + AC H +++L AEQL +P P + +L
Sbjct: 645 HGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQIL 704
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 72/305 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C ++++G +H I+ G +D ++L+ MYA L A ++F+ + KN
Sbjct: 268 ALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKN 327
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM--------------------- 107
++SWT++V+ Y + + A L++ M E + N +
Sbjct: 328 LISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRK 387
Query: 108 ---------YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+L C+ D++ G+ +H I R L + + N LL MY KCG+L
Sbjct: 388 ATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447
Query: 157 TRKLFDQYSNW---------------------AASAYGNVALWNSM-------------- 181
TR F Q S+W A + +G + W +
Sbjct: 448 TRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQ-WETTPSKFTLGTLLSACA 506
Query: 182 ----LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L GKQ+H F ++ G+E + V +L+DMY KC ++ L +F P RD++ W
Sbjct: 507 NIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNS 566
Query: 238 IIVGC 242
+I+GC
Sbjct: 567 MILGC 571
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ + + ++CS ++ ++V + + L I+ Y KC +DD LF+ M
Sbjct: 62 LYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEM 121
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
P+RD SW +I Q G A++A+ F M + + NEITF VL +C
Sbjct: 122 PQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSC------ATVL 175
Query: 544 TIFTSMKPEYGLEPHLEHYYC--------MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+F S K +GL +++ +C +VD+ G+ DA ++ E+ P+ W
Sbjct: 176 ALFLS-KQIHGLI--VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE-NPNAISWN 231
Query: 596 SMLKACETHNNTK 608
+++ N K
Sbjct: 232 VIVRRYLEMGNEK 244
>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
Length = 698
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 329/666 (49%), Gaps = 41/666 (6%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS S H IK G F NNLL Y + A +LFDEM+R+N+VSW+ ++
Sbjct: 40 RSGGHPHSAHGVAIKLGCIASTFLCNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVI 99
Query: 77 TAYTSNKRPNWAIRLYNHMLE---YGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+ + A L++HML GS + P+ FM A++ CS + +D G +H +
Sbjct: 100 SGSARHGVLAEAFALFSHMLHGAGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVA 159
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAA---SAYGNVALWNSMLS----GG 185
+ ++ D + L+DMY KCG + S+W A + +V W SM++ G
Sbjct: 160 KFGVDEDESVAAALVDMYAKCGWVD-------SSWRAFTLAPQRSVLSWTSMIACLVNQG 212
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF-- 243
+ F+K ++ C L +FN D++S I GC
Sbjct: 213 SSGYHDAAMLLFKKMLALKVWPTNVTFSCI-----LKVFN---TPDLLSVGMQIHGCLLK 264
Query: 244 ---ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
E SAL+ MY C + D+ + A +V S++ Y N N
Sbjct: 265 IGTEVDTALGSALMTMYGRCGGV-------DEIARLACRIRHDVFSRTSLLGAYARNGYN 317
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI + + + M ID T L+ C ++ R +VH + + ++LD ++ +
Sbjct: 318 AEAIGVFKEMILTNMAIDQSAMTCLLQVCSSVGQL--RMVREVHCYALKTFFKLDTLLLN 375
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+I +Y R G+ SA +F+ + ++D+++W+ L+ ++GL+ L FR+M+
Sbjct: 376 AIITVYGRCGDTTSAETVFNLMEEQDIISWTALLTCYAQNGLDEEVLLFFREMLRRGLGS 435
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
F ++SVL+ CS ++L G Q+H+ VK G + ++ +L+ +Y CG + L +F
Sbjct: 436 PVFCMTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIF 495
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M RD+V+W ++ Q+G AI F M + + P++ TF+G+LS+C GLV+
Sbjct: 496 NSMSNRDIVTWNALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVK 555
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F MK +Y LEP + HY CMVDL +AG F DA I MP++PD+ +W ++L +
Sbjct: 556 EGCEYFNEMKAKYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPYEPDQILWEALLAS 615
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKA 659
C+ H N L I A+++L +P D S Y+ LS+++A++ MWD R + K
Sbjct: 616 CKIHGNLGLGRIAAKKILEITPHDYSAYITLSSIHASVDMWDEKCWNRTVFDTQQARKDT 675
Query: 660 GMSWIE 665
G SWI+
Sbjct: 676 GRSWID 681
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/534 (22%), Positives = 220/534 (41%), Gaps = 99/534 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + R + G +H + K+G+ +D L+ MYA ++ + + F +++++SW
Sbjct: 142 CSRARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSW 201
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ + + A+ L+ ML V P +S +LK + L +G IH
Sbjct: 202 TSMIACLVNQGSSGYHDAAMLLFKKMLAL-KVWPTNVTFSCILKVFNTPDLLSVGMQIHG 260
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYS-----------NWAASA 171
+ + E DT L + L+ MY +CG + R D +S + A A
Sbjct: 261 CLLKIGTEVDTALGSALMTMYGRCGGVDEIARLACRIRHDVFSRTSLLGAYARNGYNAEA 320
Query: 172 YG--------NVALWNSML--------SGG-----KQVHAFCVKRGFEKEDVTLTSLIDM 210
G N+A+ S + S G ++VH + +K F+ + + L ++I +
Sbjct: 321 IGVFKEMILTNMAIDQSAMTCLLQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITV 380
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
Y +CG+ +FN M E+D++SWT ++ +C
Sbjct: 381 YGRCGDTTSAETVFNLMEEQDIISWTALL------TC----------------------- 411
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
Y N +EE + + G+ + TS L+AC
Sbjct: 412 -----------------------YAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACS 448
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
N LQ+H V G + D V + L+ LYA G+V+ AL++F+ + +D+V W
Sbjct: 449 RTSNLA--IGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTW 506
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCV 449
+ L+ ++HG A LF M + + +L CS + ++ G + +
Sbjct: 507 NALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKA 566
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
K E + + T ++D++ + G D + MP E D + W ++ C +G
Sbjct: 567 KYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHG 620
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ + +HC +K D N ++++Y A +F+ M ++I
Sbjct: 343 LQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDI 402
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT ++T Y N + + ML G P F ++VL+ACS + +L +G IH
Sbjct: 403 ISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPV-FCMTSVLRACSRTSNLAIGLQIHS 461
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R + ++ D + N L+ +Y CGS + K+F+ SN ++ WN++L+
Sbjct: 462 RTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSN------RDIVTWNALLTSFSQ 515
Query: 185 -GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G +V A + ++E+V T L+ + G + +G FN M + + +
Sbjct: 516 HGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMV 575
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
C +VD+++ C+A D
Sbjct: 576 HYTC----------MVDLFARAGRFCDAMDFID 598
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ LR C + ++ G +H R +K G+ D N L+++YA+ S+ A K+F+ M+
Sbjct: 440 MTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMS 499
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
++IV+W ++T+++ + AI+L++ M E V P+ + + +L +CS G + G
Sbjct: 500 NRDIVTWNALLTSFSQHGNEVAAIQLFDLMQEE-EVCPDDYTFVGLLSSCSRMGLVKEGC 558
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+E + LE V ++D++ + G
Sbjct: 559 EYFNEMKAKYNLEPKMVHYTCMVDLFARAG 588
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/708 (28%), Positives = 343/708 (48%), Gaps = 85/708 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR + I ++LH I+K G +D GN +++ Y + DA+++F M+ ++
Sbjct: 111 LRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDV 168
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS++ ++++++ R AI+L+ M G +EPN + + A+L AC S +L++G +H
Sbjct: 169 VSYSALISSFSKLNRETEAIQLFFRMRISG-IEPNEYSFVAILTACIRSLELEMGLQVHA 227
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + N L+ +Y KCG L LFD+ ++A WN+M+S
Sbjct: 228 LAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQR------DIASWNTMISSLVK 281
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+++HA+ ++ G E
Sbjct: 282 GLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLS 341
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
++I Y +CG ++ ALF MP RD+++WT +I E L+ VDM+ N
Sbjct: 342 VSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLA--VDMF---NK 396
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ E N +N++++G+ N + +A+ L + G + +T
Sbjct: 397 MPEK----------------NSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTL 440
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
T + AC LL + Q+HG I+ G+ + + + LID+ ++ G + A +F L
Sbjct: 441 TGVINACGLLLKL--EISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSL 498
Query: 383 PKK--DVVAWSGLIMGCTKHGLNSLAYLLF-RDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ + + +I G ++GL A LF R +++ +S+L VC L
Sbjct: 499 STDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHE 558
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
GKQ+H +K GF E S+I MY KC IDD + F MP DVVSW G+I G
Sbjct: 559 VGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQL 618
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--HAGLVEEAWTIFTSMKPEYGLEP 557
+ + EA+A + M ++ +KP+ ITF+ ++SA + + L++E ++F SMK + LEP
Sbjct: 619 LHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEP 678
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY +V +LG G ++AE+LI +MPF P+ ++W ++L C H NT + +A+ +
Sbjct: 679 TSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHI 738
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+ P DPS YV++SN+YA G W VR+ + G K SW+
Sbjct: 739 IGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWV 786
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 229/558 (41%), Gaps = 108/558 (19%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C + ++ G +H IK G SQ +F N L+ +Y L+ A LFDEM +
Sbjct: 207 VAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQ 266
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++I SW TM+++ A+ L+ + + + + F S +L AC+ GR
Sbjct: 267 RDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGRE 326
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
IH R LE + + N ++ Y +CGSL N A+ + + +
Sbjct: 327 IHAYAIRIGLENNLSVSNAIIGFYTRCGSL---------NHVAALFERMPV--------- 368
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW----------- 235
++ +T T +I Y++ G +D + +FN MPE++ VS+
Sbjct: 369 ------------RDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNN 416
Query: 236 ------------------------TGIIVGC--------------------FECSCFTLS 251
TG+I C F + +
Sbjct: 417 EGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEA 476
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
AL+DM S C + +A ++F S+ GN + SMI GY N EEAI L
Sbjct: 477 ALIDMCSKCGRMDDADRMFQSLSTDG----GNSIIQTSMICGYARNGLPEEAICLFYRCQ 532
Query: 312 SSG-MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
S G M +D FTS L C L F+ Q+H + +G+ + VG+++I +Y++
Sbjct: 533 SEGTMVLDEVAFTSILGVC-GTLGFH-EVGKQIHCQALKTGFHAELGVGNSIISMYSKCY 590
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS--NQDVNQFI-ISS 427
N+ A++ F+ +P DVV+W+GLI G H A ++ M + D F+ I S
Sbjct: 591 NIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVS 650
Query: 428 VLKVCS------CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
K S C + K +H E SL+ + G +++ L
Sbjct: 651 AYKFTSSNLLDECRSLFLSMKMIH------DLEPTSEHYASLVGVLGYWGLLEEAEELIN 704
Query: 482 FMP-ERDVVSWTGIIVGC 498
MP + +V W ++ GC
Sbjct: 705 KMPFDPEVSVWRALLDGC 722
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 139/311 (44%), Gaps = 23/311 (7%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF-----ALQVHGLIVTSGYELD 355
E + L S+ HS D L NLL + ++ A +H I+ G D
Sbjct: 82 ESSFPLDSNYHSPQTNTDCLIEVDDL---FNLLRLSVKYTDIDLARALHASILKLGE--D 136
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+G+ +I Y +LG V A E+F + DVV++S LI +K + A LF M
Sbjct: 137 THLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRI 196
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S + N++ ++L C L G QVHA +K G+ + +LI +Y KCG +D
Sbjct: 197 SGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDH 256
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSAC- 533
+ LF MP+RD+ SW +I + ++A+ F+ + Q++ K ++ T +L+AC
Sbjct: 257 AIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACA 316
Query: 534 ----RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
R G A+ I GLE +L ++ + G + L MP +
Sbjct: 317 RCHARIQGREIHAYAI------RIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVR- 369
Query: 590 DKTIWASMLKA 600
D W M+ A
Sbjct: 370 DIITWTEMITA 380
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 322/644 (50%), Gaps = 33/644 (5%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ + N ++S + ++ A LFD M + +V+WT ++ Y N + A +L+ M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 96 LEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
S P+ ++ +L C+ + + +H KL +DT T+ ++ +K
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAV--KLGFDTNPFLTVSNVLLKSY 194
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKEDVTLT 205
R+L + + +N++++G + +H F R G + D T +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
++ + GL F + +S + F + ++D YS + + E
Sbjct: 255 GVLKAVV-------GLHDFALGQQLHALS----VTTGFSRDASVGNQILDFYSKHDRVLE 303
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R LFD+ +Y N +IS Y +Q E ++ + G ++ F +
Sbjct: 304 TRMLFDEMPELDFVSY------NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L NL + L L+ T+ L VG++L+D+YA+ + A +F LP++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILH--VGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
V+W+ LI G + GL+ LF M SN +Q ++VLK + ASL GKQ+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
AF ++ G + + + L+DMY KCG I D + +F+ MP+R+ VSW +I NG +
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
AI F +MI+S L+P+ ++ LGVL+AC H G VE+ F +M P YG+ P +HY CM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP-ED 624
+DLLG+ G F +AE+L+ EMPF+PD+ +W+S+L AC H N L AE+L + D
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+ YV +SN+YA G W+ + V+KA ++ G KK SW+EV+
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 211/508 (41%), Gaps = 106/508 (20%)
Query: 186 KQVHAFCVKRGFE-------------------------------KEDVTLTSLIDMYLKC 214
++V A +K GF+ K V+ ++I ++K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVG------------------CFECSC-----FTLS 251
G++ LF+ MP+R VV+WT I++G C SC T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWT-ILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 252 ALV---------------------------DMYSNCNVL----CEARKLFDQYSSWAASA 280
L+ + NVL CE R+L +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
+ +N++I+GY + E+I L + SG +TF+ LKA + L +F
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA--LG 269
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+H L VT+G+ D VG+ ++D Y++ V LF +P+ D V+++ +I ++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
+ FR+M D F +++L + + L+SL+ G+Q+H + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
SL+DMY KC ++ +FK +P+R VSWT +I G Q G + F +M S L+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 521 PNEITFLGVLSACRH-----AGLVEEAWTIFTSMKPEYGLEPHLEHYYC---MVDLLGQA 572
++ TF VL A G A+ I + +LE+ + +VD+ +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSG---------NLENVFSGSGLVDMYAKC 500
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKA 600
G DA Q+ EMP + + W +++ A
Sbjct: 501 GSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 157/426 (36%), Gaps = 95/426 (22%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LH + G S+D GN +L Y+ + + LFDEM + VS+ ++++Y+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ ++ + M G + F ++ +L + L +GR +H + +
Sbjct: 329 ADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 142 LMNTLLDMYVKC-----GSLTRKLFDQYS--NWAASAYGNVA---------LWNSMLSG- 184
+ N+L+DMY KC L K Q + +W A G V L+ M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
GKQ+HAF ++ G + + + L+DMY KCG I D +
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+F MP+R+ VSW +I
Sbjct: 508 QVFEEMPDRNAVSWNALI------------------------------------------ 525
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
S + N E AI + + SG+ DS + L AC + F +
Sbjct: 526 ----------SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH-CGFVEQGTE 574
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ G + ++DL R G A +L +P + D + WS ++ C H
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 401 GLNSLA 406
SLA
Sbjct: 635 KNQSLA 640
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S++ G+ LHC+ + + GN+L+ MYA +A +F + ++ VSWT +++
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y ++L+ M ++ + ++ VLKA + L LG+ +H I R
Sbjct: 426 GYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS-------GGKQV 188
+ + L+DMY KCGS+ ++F++ + N WN+++S G +
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR------NAVSWNALISAHADNGDGEAAI 538
Query: 189 HAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
AF ++ G + + V++ ++ CG ++ G F M GI +
Sbjct: 539 GAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS-----PIYGITPKKKHYA 593
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQ 272
C ++D+ EA KL D+
Sbjct: 594 C-----MLDLLGRNGRFAEAEKLMDE 614
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/680 (28%), Positives = 341/680 (50%), Gaps = 50/680 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C + +++ +G+ +H +K+ L ++ GN+++SMYA S DA FD + ++N
Sbjct: 50 LQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRN 109
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SWT +V A+ + + +R M + G V P+ + L +C L G IH
Sbjct: 110 LYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAVTFITALGSCGDPESLRDGIRIH 168
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + +LE D + N LL+MY KCGSL+ +++F + NV W S+++G
Sbjct: 169 QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER-----TRNVISW-SIMAGAH 222
Query: 187 QVHA----------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+H F + G + + +++ + DG + +
Sbjct: 223 ALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIH-----------S 271
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
I + FE +A++ MY C + EARK+FD A +V WN M+S YV
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE----ALRDVVSWNIMLSAYVH 327
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N++ ++AI L + + D T+ S L AC + + +H IV E +
Sbjct: 328 NDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVG--LGRVLHKQIVNDELEKNV 382
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN- 415
IVG+ L+ +YA+ G+ A +F ++ ++ +++W+ +I + L + A LF+ M+
Sbjct: 383 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 442
Query: 416 ----SNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
S+Q V + ++L C+ +++L +GK V G + T+++++Y K
Sbjct: 443 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 502
Query: 470 CGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
CGEI++G +F + R DV W +I Q G++ EA+ F M ++P+ +F+
Sbjct: 503 CGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 562
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEY-GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+L AC H GL ++ + FTSM EY + ++H+ C+ DLLG+ G +AE+ + ++P
Sbjct: 563 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPV 622
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
KPD W S+L AC H + K +A +LL P + YV LSN+YA L W +++KV
Sbjct: 623 KPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKV 682
Query: 648 RKAGKKLGEKKA-GMSWIEV 666
RK + G KK G+S IE+
Sbjct: 683 RKFMAEQGVKKERGVSTIEI 702
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 222/567 (39%), Gaps = 108/567 (19%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ AL CG S++ G +H ++ L D N LL+MY SL+ A ++F +M R
Sbjct: 149 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 208
Query: 67 -KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N++SW+ M A+ + A+R + ML G M + +L ACS + GR
Sbjct: 209 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVT-ILSACSSPALVQDGR 267
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
LIH I E + ++ N ++ MY +CG++ RK+FD A +V WN MLS
Sbjct: 268 LIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE----ALRDVVSWNIMLS 323
Query: 184 G-----------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ +H V EK +
Sbjct: 324 AYVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 383
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+ MY KCG + A+F+ M +R ++SWT II Y +
Sbjct: 384 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII---------------SAYVRRRL 428
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ EA LF Q + L + S + D+ F
Sbjct: 429 VAEACHLFQQM------------------------------LELEKNGSSQRVKPDALAF 458
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L AC ++ V + G D VG+ +++LY + G ++ +F +
Sbjct: 459 VTILNACADVSALEQ--GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGV 516
Query: 383 -PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ DV W+ +I + G + A LF M + F S+L CS +G
Sbjct: 517 CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG 576
Query: 442 KQVHAFCVKRGFEKEDITLT-----SLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGII 495
K ++ E ++T T + D+ + G + + + +P + D V+WT ++
Sbjct: 577 K---SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPN 522
C + K A +++ RL+P
Sbjct: 634 AACRNHRDLKRAKEVANKLL--RLEPR 658
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 202/673 (30%), Positives = 338/673 (50%), Gaps = 45/673 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +++G+ +H K G D+F GN LL+ Y + DA K+FDEM ++
Sbjct: 144 LKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDK 203
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEY-GSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW T++ + + A+ + M+ ++P+ +VL C+ + D + R++H
Sbjct: 204 VSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVH 263
Query: 129 ERITREKLEYDTV-LMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+ L V + N L+D+Y KCGS ++K+FD+ NV WN++++
Sbjct: 264 CYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDER------NVISWNAIITSF 317
Query: 185 ---GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
GK + A V R G VT++S++ + + G G+ + F + +
Sbjct: 318 SFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAI---- 373
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
E F ++L+DMY+ A +F++ N+ WN+MI+ +
Sbjct: 374 -------ESDVFISNSLIDMYAKSGSSRIASTIFNKM------GVRNIVSWNAMIANFAR 420
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N EA+ L+ + + G ++ TFT+ L AC L N ++H I+ G LD
Sbjct: 421 NRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLN--VGKEIHARIIRVGSSLDL 478
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM--I 414
V + L D+Y++ G + A +F+ + +D V+++ LI+G ++ + + LF +M +
Sbjct: 479 FVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLL 537
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
D+ F+ V+ C+ LA +R+GK++H V++ F SL+D+Y +CG ID
Sbjct: 538 GMRPDIVSFM--GVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRID 595
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F + +DV SW +I+G G G AI F+ M + ++ + ++F+ VLSAC
Sbjct: 596 LATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACS 655
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H GL+E+ F M + +EP HY CMVDLLG+AG ++A LI + PD IW
Sbjct: 656 HGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIW 714
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H N +L AE L P+ Y++LSN+YA WD +KVR+ K
Sbjct: 715 GALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSR 774
Query: 655 GEKK-AGMSWIEV 666
G KK G SW++V
Sbjct: 775 GAKKNPGCSWVQV 787
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 239/544 (43%), Gaps = 44/544 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKL 60
DL +V L C + + +HC +K G L + GN L+ +Y S + K+
Sbjct: 239 DLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKV 298
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE+ +N++SW ++T+++ + A+ ++ M++ G + PN S++L G
Sbjct: 299 FDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEG-MRPNSVTISSMLPVLGELGL 357
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALW 178
LG +H + +E D + N+L+DMY K GS + +F++ N+ W
Sbjct: 358 FKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKM------GVRNIVSW 411
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG- 237
N+M++ F R E E V L M K GE + + N +P + +
Sbjct: 412 NAMIAN------FARNR-LEYEAVELVR--QMQAK-GETPNNVTFTNVLPACARLGFLNV 461
Query: 238 -------IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
II F +AL DMYS C L A+ +F+ S V+ +N +
Sbjct: 462 GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN------ISVRDEVS-YNIL 514
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I GY + E++ L S + GM D +F + AC NL R ++HGL+V
Sbjct: 515 IIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFI--RQGKEIHGLLVRK 572
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+ V ++L+DLY R G + A ++F+ + KDV +W+ +I+G G A LF
Sbjct: 573 LFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLF 632
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + + +VL CS + +G++ E ++D+ +
Sbjct: 633 EAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRA 692
Query: 471 GEIDDGLALFK---FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
G +++ L + +P+ ++ W ++ C +G + + + + + LKP +
Sbjct: 693 GLMEEAADLIRGLSIIPDTNI--WGALLGACRIHGNIELGLWAAEHLFE--LKPQHCGYY 748
Query: 528 GVLS 531
+LS
Sbjct: 749 ILLS 752
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFK--FM 483
++L++C+ +L + KQVHA+ + GF ++L SLI Y G + L LF+
Sbjct: 39 NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
R W +I G + + M+++ +KP+E T+ VL C V +
Sbjct: 99 YSRSAFLWNTLIRANSIAG-VFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGR 157
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+ + + G + + ++ G G F DA ++ EMP + DK W +++ C
Sbjct: 158 EVH-GVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMP-ERDKVSWNTVIGLCSL 215
Query: 604 H 604
H
Sbjct: 216 H 216
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 324/654 (49%), Gaps = 55/654 (8%)
Query: 14 GQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G R ++ ++HC I+K L + F N+LL+ YA L A ++FDEM N+ +
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++A ++ RL+ M E +V Y+A++ S +G ++ +
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVS-----YNALITGFSSTGSPARSVQLYRALL 137
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
RE+ T + + + M ASA + AL G VH
Sbjct: 138 REESVRPTRITLSAMIM------------------VASALSDRAL-------GHSVHCQV 172
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
++ GF + L+DMY K G I D +F M + VV + +I G C
Sbjct: 173 LRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC------- 225
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
++ +A+ LF + W +M++G N EA+ + + +
Sbjct: 226 --------KMIEDAKGLFQLMVDR------DSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ ID YTF S L AC L S Q+H I + YE + VGS L+D+Y++ ++
Sbjct: 272 EGVGIDQYTFGSILTACGALAA--SEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F R+ +++++W+ +I+G ++ + A F +M + F + SV+ C
Sbjct: 330 RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LASL G Q H + G + +L+ +Y KCG I+D LF M D VSWT
Sbjct: 390 ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ G Q G+AKE I F++M+ + LKP+ +TF+GVLSAC AGLVE+ F SM+ +
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD 509
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+ + P +HY CM+DL ++G F +AE+ I +MP PD WA++L +C N ++
Sbjct: 510 HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
AE LL T P++P+ YV+L +++A G W ++ +R+ + + +K+ G SWI+
Sbjct: 570 AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 216/491 (43%), Gaps = 58/491 (11%)
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEID 218
L ++Y+ +SA G+ ++G VH +K + L L+ Y K G +
Sbjct: 8 LCNRYAAILSSAAGDGGRTGVRVAGA--VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLA 65
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
+F+ MP+ ++ FT +AL+ ++ ++ + +LF A
Sbjct: 66 RARRVFDEMPDPNL---------------FTRNALLSALAHSRLVPDMERLFASMPERDA 110
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+Y N++I+G+ ++ L + + SA+ + L+ +
Sbjct: 111 VSY------NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS-DRA 163
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK------------- 385
VH ++ G+ VGS L+D+YA++G ++ A +F + K
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223
Query: 386 ------------------DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
D + W+ ++ G T++GL A +FR M ++Q+ S
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C LA+ GKQ+HA+ + +E ++L+DMY KC I A+F+ M R+
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
++SWT +IVG GQN ++EA+ F EM +KP++ T V+S+C + +EE F
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG-AQFH 402
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ GL ++ +V L G+ G +DA +L EM F D+ W +++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKA 461
Query: 608 KLVSIIAEQLL 618
K + E++L
Sbjct: 462 KETIDLFEKML 472
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 35/295 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG + ++GK +H I + ++F G+ L+ MY+ S+ A +F M +NI
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ Y N A+R ++ M + ++P+ F +V+ +C+ L+ G H
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
L + N L+ +Y KCGS+ +LFD+ S + + W ++++G Q
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS------FHDQVSWTALVTGYAQ 457
Query: 188 -------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PERDVVSWTG 237
+ F + G + + VT ++ + G ++ G F+ M + D+V
Sbjct: 458 FGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVP--- 514
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
I + C ++D+YS EA + Q + A+G W +++S
Sbjct: 515 -IDDHYTC-------MIDLYSRSGRFKEAEEFIKQMPH-SPDAFG----WATLLS 556
>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 324/660 (49%), Gaps = 66/660 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +I + + + +I + + IF N + Y + L+DA +LF+EM +++ SW
Sbjct: 70 CSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSW 129
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+TAY A+ L++ M G + N +++VL +C+ L L + IH I
Sbjct: 130 NAMITAYAQGGCAEKALWLFSRMNRLG-IWANEITFASVLGSCATVLALFLSKQIHGLIV 188
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAY------------------ 172
+ ++ +L ++L+D+Y KC ++ R++FD+ N A ++
Sbjct: 189 KYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVV 248
Query: 173 -------GNVALWN-------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
N+ N S L G Q+H ++ G+++++V +SLIDMY
Sbjct: 249 MFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYA 308
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG+++ +F ++++SWT I+ G Y+ EAR LFD+
Sbjct: 309 KCGDLESACRIFELPSSKNLISWTSIVSG---------------YAMSGQTREARVLFDE 353
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ V WN+M++GY Q EEA+ + + + ID T L C L
Sbjct: 354 MPERS------VISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGL 407
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWS 391
+ S QVHG I G + VG+ L+ +Y + GN++S F+++ +D ++W+
Sbjct: 408 SDVES--GKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWN 465
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ +HGL+ A +F +M ++F + ++L C+ + +L +GKQ+H F ++
Sbjct: 466 ALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRN 524
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+E + + +L+DMY KC ++ L +FK P RD++ W +I+GC NGR ++ + F
Sbjct: 525 GYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLF 584
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M + +KP+ ITF G+L C GL F SM +Y + P LEHY M++L G+
Sbjct: 585 GLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGR 644
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G D+ E I MPF+P + + AC H +++L AEQL +P P + +L
Sbjct: 645 HGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQIL 704
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 72/305 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C ++++G +H I+ G +D ++L+ MYA L A ++F+ + KN
Sbjct: 268 ALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKN 327
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM--------------------- 107
++SWT++V+ Y + + A L++ M E + N +
Sbjct: 328 LISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRK 387
Query: 108 ---------YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+L C+ D++ G+ +H I R L + + N LL MY KCG+L
Sbjct: 388 ATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447
Query: 157 TRKLFDQYSNW---------------------AASAYGNVALWNSM-------------- 181
TR F Q S+W A + +G + W +
Sbjct: 448 TRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQ-WETTPSKFTLGTLLSACA 506
Query: 182 ----LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L GKQ+H F ++ G+E + V +L+DMY KC ++ L +F P RD++ W
Sbjct: 507 NIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNS 566
Query: 238 IIVGC 242
+I+GC
Sbjct: 567 MILGC 571
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ + + ++CS ++ ++V + + L I+ Y KC +DD LF+ M
Sbjct: 62 LYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEM 121
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
P+RD SW +I Q G A++A+ F M + + NEITF VL +C
Sbjct: 122 PQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSC------ATVL 175
Query: 544 TIFTSMKPEYGLEPHLEHYYC--------MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+F S K +GL +++ +C +VD+ G+ DA ++ E+ P+ W
Sbjct: 176 ALFLS-KQIHGLI--VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE-NPNAISWN 231
Query: 596 SMLK 599
+++
Sbjct: 232 VIVR 235
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 325/655 (49%), Gaps = 34/655 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-NIVSWTTMVTAYT 80
+ H RI + G +D+ GN ++SMYA + A +F + K +++SW TM+ A
Sbjct: 354 ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASE 413
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-D 139
K + ++HML G ++PN + A+L ACS S LD GR IH I + +Y +
Sbjct: 414 DRKSFGKVVNTFHHMLLAG-IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472
Query: 140 TVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
+ + L+ MY KCGS+ +F + + S + WN ML Q
Sbjct: 473 SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRS----LVTWNVMLGAYAQ---------N 519
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-----ERDVVSWTGIIVGCFECSCFTLSA 252
++ +L++M L+ G + D L+ + + + V I+ + +C +A
Sbjct: 520 DRSKEAFGALMEM-LQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE-TA 577
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ M+ C L +AR +FD+ +G+V W +M+S N +E L +
Sbjct: 578 LISMHGRCRELEQARSVFDEMD------HGDVVSWTAMVSATAENRDFKEVHHLFRRMQL 631
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D +T + L C++ +H + G E D V + L+++Y+ G+
Sbjct: 632 EGVIPDKFTLATTLDTCLDSTTLG--LGKIIHACVTEIGLEADIAVENALLNMYSNCGDW 689
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ AL F + +D+V+W+ + + GL A LLFR M ++ S+ L V
Sbjct: 690 REALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVS 749
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
A + GK H + G + + T L+ +Y KCG++D+ ++LF+ + VV
Sbjct: 750 GGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLN 809
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II Q+G ++EA+ F +M Q ++P+ T + ++SAC HAG+VEE + F +MK
Sbjct: 810 AIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEY 869
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G+ P LEHY C VDLLG+AG + AEQ+I +MPF+ + +W S+L C+ + +L
Sbjct: 870 FGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGER 929
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
A+++L P + + +V+LSN+Y G W RK K A GMSW+E+
Sbjct: 930 CAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEI 984
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 188/726 (25%), Positives = 297/726 (40%), Gaps = 146/726 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL+ L+ C + +GK H I GL Q +F GN L++MY SL +AH +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M +N+VSWT +++A + A L+ ML S PN + A+L AC+ S DL
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 122 DLGRLIHERITREKLEYD----TVLMNTLLDMYVKCGS--------LTRKLFDQYSNWA- 168
+GR IH I LE + T++ N +++MY KCGS LT D S W
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVS-WTA 202
Query: 169 -ASAYG-----------------------NVALWNSMLSG------GKQVHAFCVKRGFE 198
A AY NV + + L G +H+ + G
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLG 262
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPER---DVVSWTGIIVGCFECSCFTLSALVD 255
+ + +LI+MY KCG+ + +F M R D+VSW +I E
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAG--------- 313
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
++ +A+ + + GM
Sbjct: 314 -------------------------------------------RHGDAMAIFRRLRLEGM 330
Query: 316 CIDSYTFTSALKA-CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+S T + L A + ++F + A + HG I SGY D +VG+ +I +YA+ G +
Sbjct: 331 RPNSVTLITILNALAASGVDFGA--ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSA 388
Query: 375 ALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A +F R+ K DV++W+ ++ F M+ + D N+ ++L CS
Sbjct: 389 AWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACS 448
Query: 434 CLASLRRGKQVHAFCVKRGFEK-EDITLTSLIDMYLKCGEIDDGLALFKFM--PERDVVS 490
+L G+++H+ + R + E T L+ MY KCG I + +FK M P R +V+
Sbjct: 449 NSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVT 508
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC----------------- 533
W ++ QN R+KEA EM+Q + P+ ++F VLS+C
Sbjct: 509 WNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESG 568
Query: 534 -RHAGL-------------VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
R A L +E+A ++F M ++G + + MV + F +
Sbjct: 569 YRSACLETALISMHGRCRELEQARSVFDEM--DHG---DVVSWTAMVSATAENRDFKEVH 623
Query: 580 QLIAEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPSKYVMLSNVY 635
L M + PDK A+ L C L II + E D + L N+Y
Sbjct: 624 HLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMY 683
Query: 636 ATLGMW 641
+ G W
Sbjct: 684 SNCGDW 689
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 164/680 (24%), Positives = 286/680 (42%), Gaps = 117/680 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT----GNNLLSMYADFTSLNDAHKLF 61
+V L C R + G+S+H I + GL ++ T GN +++MYA S DA +F
Sbjct: 130 LVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVF 189
Query: 62 DEMARKNIVSWTTMVTAYTSNKR--PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ K++VSWT M AY +R P+ A+R++ ML + PN + L AC+
Sbjct: 190 LTIPEKDVVSWTAMAGAYAQERRFYPD-ALRIFREML-LQPLAPNVITFITALGACT--- 244
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L G +H + L +D + N L++MY KCG + + A+ ++ WN
Sbjct: 245 SLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDW-EGAYGVFKAMASRQELDLVSWN 303
Query: 180 SMLS---------------------------------------------GGKQVHAFCVK 194
+M+S ++ H +
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWE 363
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWT------------GIIVG 241
G+ ++ V ++I MY KCG +F + + DV+SW G +V
Sbjct: 364 SGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 242 CF--------ECSCFTLSALVDMYSNCNVLCEARKLF------------DQYSSWAASAY 281
F + + + A+++ SN L RK+ ++ S Y
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMY 483
Query: 282 G--------------------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
G ++ WN M+ Y N++++EA L + G+ D+ +
Sbjct: 484 GKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
FTS L +C + S+ A + I+ SGY + + LI ++ R ++ A +F
Sbjct: 544 FTSVLSSC-----YCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDE 597
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ DVV+W+ ++ ++ + LFR M ++F +++ L C +L G
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG 657
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K +HA + G E + +L++MY CG+ + L+ F+ M RD+VSW + Q
Sbjct: 658 KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G AKEA+ F+ M +KP+++TF L+ + LV + +F + E GL+ +
Sbjct: 718 GLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSV 776
Query: 562 YYCMVDLLGQAGCFDDAEQL 581
+V L + G D+A L
Sbjct: 777 ATGLVKLYAKCGKLDEAISL 796
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C ++ GK +H + + GL DI N LL+MY++ +A F+ M
Sbjct: 641 LATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMK 700
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VSW M AY A+ L+ HM G V+P+ +S L S + G+
Sbjct: 701 ARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG-VKPDKLTFSTTLNVSGGSALVSDGK 759
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
L H L+ D + L+ +Y KCG L LF W V L N+++
Sbjct: 760 LFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQW------TVVLLNAIIG 813
Query: 184 GGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
Q H F + G + TL S+I G +++G + F M E +
Sbjct: 814 ALAQ-HGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGI 872
Query: 234 SWTGIIVGCF 243
S T CF
Sbjct: 873 SPTLEHYACF 882
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 321/639 (50%), Gaps = 35/639 (5%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++IF+ N +LS Y+ L A LF +N +WT M+ A+ + R + A+ L+ M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 96 LEYGSVEPNGFMYSAVL--KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
L G + P+ + VL C++ +H + L+ + NTLLD Y K
Sbjct: 132 LGEGVI-PDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKH 183
Query: 154 GSLT--RKLFDQYSNWAASAYGNVALWNS---MLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
G L R++F + + A Y + + S + + Q+ A + G T +S++
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+ + L V+ T ++ + F ++L+D YS C+ L + R+
Sbjct: 244 TVAAGMAHL-----LLGHQVHALVLRSTSVL------NVFVNNSLLDFYSKCDCLDDMRR 292
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFD+ NV+ +N +I+ Y N+ + L + G + + L
Sbjct: 293 LFDEMPE-----RDNVS-YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+L + + Q+H +V G + ++G+ LID+Y++ G + +A F +K +
Sbjct: 347 AGSLPDVH--IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+W+ LI G ++G + A LF DM + ++ SS++K S LA + G+Q+H++
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
++ G++ + + L+DMY KCG +D+ L F MPER+ +SW +I G AK AI
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F+ M+ P+ +TFL VL+AC H GL +E F MK +Y + P EHY C++D
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+ GCF ++++ EMPFK D IW S+L +C H N +L + A++L P D + Y
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPY 644
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V+LSN+YA G W+ + V+K + G K++G SW+E+
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEI 683
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/556 (25%), Positives = 223/556 (40%), Gaps = 111/556 (19%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH IK+GL +F N LL Y L A ++F EM K+ V++ M+ +
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A++L+ M G + F +S++L + L LG +H + R + +
Sbjct: 216 LHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVN 274
Query: 144 NTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG--------------------- 173
N+LLD Y KC L R+LFD+ N +AY
Sbjct: 275 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 334
Query: 174 -NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
V + +MLS GKQ+HA V G ED+ +LIDMY KCG +D +
Sbjct: 335 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ E+ +SWT +I G
Sbjct: 395 FSNRSEKSAISWTALITG------------------------------------------ 412
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
YV N Q+EEA+ L S + +G+ D TF+S +KA +L Q+
Sbjct: 413 ----------YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGRQL 460
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H ++ SGY+ GS L+D+YA+ G + AL F +P+++ ++W+ +I +G
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCS-------CLASLRRGKQVHAFCVKRGFEKE 456
A +F M++ + + SVL CS C+ K H + + E
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK--HQYSISPWKEH- 577
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ID + G + MP + D + WT I+ C +G + A ++
Sbjct: 578 ---YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634
Query: 516 QSRLKPNEITFLGVLS 531
++P + T +LS
Sbjct: 635 G--MEPTDATPYVILS 648
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 183/447 (40%), Gaps = 61/447 (13%)
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
A VK GF+ L + L G + A+F+ MP +++ F+
Sbjct: 32 ARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNI---------------FS 76
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
L+ ++ YS+ L A+ LF +S + N W M+ + + +A++L
Sbjct: 77 LNLILSAYSSSGDLPAAQHLF------LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ G+ D T T+ +LN +H + G + V + L+D Y +
Sbjct: 131 MLGEGVIPDRVTVTT-------VLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKH 183
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + +A +F + KD V ++ ++MGC+K GL++ A LF M + F SS+L
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
V + +A L G QVHA ++ SL+D Y KC +DD LF MPERD V
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWT 544
S+ II N A + F+EM + + + +LS H G A
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQL 363
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLG-------------------------QAGCFDDAE 579
+ + E L L Y +L Q G ++A
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423
Query: 580 QLIAEMP---FKPDKTIWASMLKACET 603
QL ++M +PD+ ++S++KA +
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSS 450
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 188/485 (38%), Gaps = 114/485 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H +++ ++F N+LL Y+ L+D +LFDEM ++ VS+ ++ AY
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N+ +RL+ M + G + Y+ +L D+ +G+ IH ++ L + +
Sbjct: 315 NQCAATVLRLFREMQKLG-FDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV------------------- 175
L N L+DMY KCG L + F S +W A G V
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433
Query: 176 -----ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
A ++S++ G+Q+H++ ++ G++ + + L+DMY KCG +D+ L
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ MPER+ +SW +I
Sbjct: 494 RTFDEMPERNSISWNAVI------------------------------------------ 511
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI-NLLNFN--SR 338
S Y + + AI + + G DS TF S L AC N L
Sbjct: 512 ----------SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGC 397
F L H ++ E V ID R+G ++ +P K D + W+ ++ C
Sbjct: 562 FHLMKHQYSISPWKEHYACV----IDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSC 617
Query: 398 TKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-----R 451
HG LA + + D ++I S + R G+ A CVK R
Sbjct: 618 RIHGNQELARVAADKLFGMEPTDATPYVILSNIYA-------RAGQWEDAACVKKIMRDR 670
Query: 452 GFEKE 456
G KE
Sbjct: 671 GVRKE 675
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 28/252 (11%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G + GK +H +++ GL+ + GN L+ MY+ L+ A F + K+ +SW
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T ++T Y N + A++L++ M G + P+ +S+++KA S + LGR +H +
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSG----GK 186
R + + L+DMY KCG L L FD+ N WN+++S G+
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE------RNSISWNAVISAYAHYGE 519
Query: 187 QVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-----WT 236
+A + GF + VT S++ G D+ + F+ M + +S +
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYA 579
Query: 237 GII-----VGCF 243
+I VGCF
Sbjct: 580 CVIDTLGRVGCF 591
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
I G+ LH +I+ G +F+G+ L+ MYA L++A + FDEM +N +SW +++A
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD-----LGRLIHERITR 133
Y AI+++ ML G P+ + +VL ACS +G D + H+
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV 193
E+ +++TL V C S +K+ + A L + + G +++
Sbjct: 573 PWKEHYACVIDTL--GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAA 630
Query: 194 KR--GFEKEDVT-LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ G E D T L ++Y + G+ +D + M +R V +G
Sbjct: 631 DKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 677
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 263/487 (54%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G + + TSLI MY+K G +D +F+ RDVVS+T +I G
Sbjct: 122 GQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKG--- 178
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN++ISGY +EA+
Sbjct: 179 ------------YASNGYIXSAQKMFDEI------PVKDVVSWNALISGYAETGNYKEAL 220
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + L AC + QVH I G+ + + + LID
Sbjct: 221 ELFKEMMKTNVKPDESTMVTVLSACAQSASI--ELGRQVHSWIDDHGFGSNLKIVNALID 278
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY + G V++A LF L KDV++W+ LI G T L A LLF++M+ S + N+
Sbjct: 279 LYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVT 338
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 339 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M R + SW +I G +GRA A F M + ++P++ITF+G+LSAC H+G+++
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y + P LEHY CM+DLLG +G F +AE++I M PD IW S+LKAC+
Sbjct: 459 RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACK 518
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+ L+ P++ YV+LSN+YAT G W+ ++K R G KK G
Sbjct: 519 MHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGC 578
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 579 SSIEIDS 585
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 165/335 (49%), Gaps = 34/335 (10%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LKAC F R Q
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAF--REGQQ 124
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGN------------------------------- 371
+HG ++ G +LD V ++LI +Y + G
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA ++F +P KDVV+W+ LI G + G A LF++M+ +N ++ + +VL
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ AS+ G+QVH++ GF + +LID+Y+KCGE++ LF+ + +DV+SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PNE+T L +L AC H G ++ W K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
G+ ++D+ + G + A+Q+ M
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 136/604 (22%), Positives = 235/604 (38%), Gaps = 172/604 (28%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + L+ + F L A +FD + N++ W
Sbjct: 13 KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWN 72
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P A+ LY M+ G V PN + + +LKAC+ S G+ IH + +
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLV-PNSYTFPFLLKACAKSKAFREGQQIHGHVLK 131
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------- 172
+ D + +L+ MYVK G RK+FDQ S+ +A++ Y
Sbjct: 132 LGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKM 191
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+++SG
Sbjct: 192 FDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASI 251
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH++ GF + +LID+Y+KCGE++ LF + +DV+SW +I G
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG- 310
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ +E
Sbjct: 311 --------------YTHMNLY-------------------------------------KE 319
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + SG + T S L AC +L + + V+ G + ++L
Sbjct: 320 ALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSL 379
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA+ G++++A ++F + + + +W+ +I G HG + A+ +F M
Sbjct: 380 IDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRM--------- 430
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
K G E +DIT L+ G +D G +F+
Sbjct: 431 --------------------------RKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 483 MPERDVVSWTGIIVGC-----GQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSACRHA 536
M E ++ GC G +G KEA +EMI S + P+ + + +L AC+
Sbjct: 465 MTEDYKITPKLEHYGCMIDLLGHSGLFKEA----EEMINSMEMDPDGVIWCSLLKACKMH 520
Query: 537 GLVE 540
G VE
Sbjct: 521 GNVE 524
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 176/478 (36%), Gaps = 152/478 (31%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ ++G+ +H ++K G D++ +L++MY DA K+FD+ + +++
Sbjct: 110 LKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDV 169
Query: 70 VSWTTMVTAYTSN-----------KRP-----NW---------------AIRLYNHMLEY 98
VS+T ++ Y SN + P +W A+ L+ M++
Sbjct: 170 VSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK- 228
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+V+P+ VL AC+ S ++LGR +H I + ++N L+D+Y+KCG +
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
LF+ S Y +V WN+++ G
Sbjct: 289 ASGLFEGLS------YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSI 342
Query: 185 ------------GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G+ +H + KR G TSLIDMY KCG+I+ +F+ M R
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ SW +I G
Sbjct: 403 SLSSWNAMIFG------------------------------------------------- 413
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+ ++ + A + S + G+ D TF L AC S + G +
Sbjct: 414 ---FAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSAC-------SHSGMLDLGRHIFR 463
Query: 351 GYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
DY + L IDL G K A E+ + + D V W L+ C HG
Sbjct: 464 SMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 42/338 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C Q SI+ G+ +H I +G ++ N L+ +Y + A LF
Sbjct: 234 DESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLF 293
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 294 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNEVTMLSILPACAHLGAI 352
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L +L+DMY KCG + +++FD N + S+
Sbjct: 353 DIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS------ 406
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ AF + K G E +D+T L+ G +D G +F M
Sbjct: 407 WNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
E ++ GC ++D+ + + EA ++ + W A
Sbjct: 467 EDYKITPKLEHYGC----------MIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKA 516
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
+GNV L S + + +N + LLS+I+++
Sbjct: 517 CKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATA 554
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 21 IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRG--- 77
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + R G+Q+H +K G + +
Sbjct: 78 HALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLD 137
Query: 457 DITLTSLIDMYLKCGEIDD---------------------GLA----------LFKFMPE 485
TSLI MY+K G +D G A +F +P
Sbjct: 138 LYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPV 197
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+DVVSW +I G + G KEA+ F+EM+++ +KP+E T + VLSAC + +E +
Sbjct: 198 KDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQV 257
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L + +K D W +++ TH
Sbjct: 258 HSWID-DHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGGY-THM 314
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P++ MLS
Sbjct: 315 NLYKEALLLFQEMLRSGESPNEVTMLS 341
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 253/425 (59%), Gaps = 15/425 (3%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+E F ++ L++MY N+L EA LFD+ NV W +MIS Y N+ N++
Sbjct: 86 YEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPE------RNVVSWTTMISAYS-NKLNDK 138
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + G+ + +T++S L+AC L N Q+H I+ +G E D V S L
Sbjct: 139 ALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR-----QLHCGIIKTGLESDVFVRSAL 193
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+Y++ ++ +AL +F +P +D+V W+ +I G ++ + A LF+ M + +Q
Sbjct: 194 IDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQ 253
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++SVL+ C+ LA L G+QVH +K F+++ I +LIDMY KCG ++D + F
Sbjct: 254 ATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSR 311
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M E+DV+SW+ ++ G QNG +++A+ F+ M +S +PN IT LGVL AC HAGLVE+
Sbjct: 312 MVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG 371
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
W F SMK +G++P EHY C++DLLG+AG D+A +LI EM +PD W ++L AC
Sbjct: 372 WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACR 431
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
H N L A++++ PED Y++LSN+YA W+ +++VRK G K G
Sbjct: 432 VHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGC 491
Query: 662 SWIEV 666
SWIEV
Sbjct: 492 SWIEV 496
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 139/274 (50%), Gaps = 47/274 (17%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E ++ C R ++++GK +H I G +F N LL+MY F L +A LFDEM +
Sbjct: 60 ELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPER 119
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VSWTTM++AY SNK + A++ M G V PN F YS+VL+AC +L R +
Sbjct: 120 NVVSWTTMISAY-SNKLNDKALKCLILMFREG-VRPNMFTYSSVLRACDGLPNL---RQL 174
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSN------------WAASAYG 173
H I + LE D + + L+D+Y K L L FD+ +A ++ G
Sbjct: 175 HCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDG 234
Query: 174 NVAL--------------------------WNSMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
N AL ++L G+QVH +K F+++ + +L
Sbjct: 235 NEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNAL 292
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
IDMY KCG ++D + F+ M E+DV+SW+ ++ G
Sbjct: 293 IDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAG 326
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 196/478 (41%), Gaps = 105/478 (21%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A+R + M +G V + YS ++K CS G + G+ +HE I + E ++NTLL
Sbjct: 39 AMRAMDAMERHG-VFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97
Query: 148 DMYVKCGSL--TRKLFDQYS-----NWAA--SAYG---------------------NVAL 177
+MYVK L LFD+ +W SAY N+
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFT 157
Query: 178 WNSMLSGG------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
++S+L +Q+H +K G E + ++LID+Y K ++D+ L +F+ MP RD
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRD 217
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+V W II G
Sbjct: 218 LVVWNSIIGG-------------------------------------------------- 227
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+ N EA+ L + +G D T TS L+AC L + VH L
Sbjct: 228 --FAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL----K 281
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
++ D I+ + LID+Y + G+++ A F R+ +KDV++WS ++ G ++G + A LF
Sbjct: 282 FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFE 341
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDM 466
M S N + VL CS + +G F V G E LID+
Sbjct: 342 SMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREH----YGCLIDL 397
Query: 467 YLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+ G +D+ + L M E D V+W ++ C + AI +++I+ L+P +
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE--LEPED 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K CS +++ GK+VH +G+E + + +L++MY+K +++ LF MPE
Sbjct: 59 SELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPE 118
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--------HAG 537
R+VVSWT +I N +A+ M + ++PN T+ VL AC H G
Sbjct: 119 RNVVSWTTMI-SAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCG 177
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+++ GLE + ++D+ + D+A + EMP + D +W S+
Sbjct: 178 IIKT------------GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR-DLVVWNSI 224
Query: 598 L 598
+
Sbjct: 225 I 225
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/662 (29%), Positives = 329/662 (49%), Gaps = 41/662 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SI H +II +G DI L +D ++ A +F + R ++ + ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N+ P+ ++ ++ H+ + ++PN Y+ + A S D GR+IH + + +
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAF 191
+ +L + ++ MY K + RK+FD+ + LWN+M+SG ++ V +
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPE------KDTILWNTMISGYRKNEMYVESI 205
Query: 192 CVKRGFEKEDVT---LTSLIDMYLKCGEIDD---GLALFNFMPERDVVSWTGIIVGCFEC 245
V R E T T+L+D+ E+ + G+ + + + GC+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK----------TGCYSH 255
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ L+ + +YS C + LF ++ ++ +N+MI GY N + E +++
Sbjct: 256 D-YVLTGFISLYSKCGKIKMGSALFREFRK------PDIVAYNAMIHGYTSNGETELSLS 308
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + SG + S T S + +L+ +HG + S + V + L +
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVSGHLM-----LIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++L ++SA +LF P+K + +W+ +I G T++GL A LFR+M S N I
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+ +L C+ L +L GK VH FE T+LI MY KCG I + LF M +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++ V+W +I G G +G+ +EA+ F EM+ S + P +TFL VL AC HAGLV+E I
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM YG EP ++HY CMVD+LG+AG A Q I M +P ++W ++L AC H
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWI 664
+T L ++E+L P++ +V+LSN+++ + + VR+ KK KA G + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 665 EV 666
E+
Sbjct: 664 EI 665
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 197/505 (39%), Gaps = 118/505 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + G+ +H + + G ++ G+N++ MY F + DA K+FD M K+ + W TM+
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ Y N+ +I+++ ++ + +L A + +L LG IH T+
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 137 EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYG--------------NVALWNS 180
++ + +Y KCG + LF ++ AY +++L+
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 181 -MLSGGK--------------------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
MLSG + +H +C+K F T+L +Y K EI+
Sbjct: 313 LMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 220 GLALFNFMPERDVVSWTGIIVG------------------------------CFECSCFT 249
LF+ PE+ + SW +I G C +C
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 250 L-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L +AL+ MY+ C + EAR+LFD + N
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK------KNE 486
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN-----FNS 337
WN+MISGY L+ Q +EA+ + + +SG+ TF L AC L+ FNS
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL---PKKDVVAWSGLI 394
+I G+E + ++D+ R G+++ AL+ + P V W L+
Sbjct: 547 --------MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV--WETLL 596
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQD 419
C H +LA + + + D
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPD 621
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C Q ++ GK +H + I+ L+ MYA S+ +A +LFD M +KN
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIH 128
V+W TM++ Y + + A+ ++ ML G + P + VL ACS +G + G + +
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSG-ITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
I R E ++D+ + G L R L Q+ A S ++W ++L G ++
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRAL--QFIE-AMSIEPGSSVWETLL-GACRI 601
Query: 189 H 189
H
Sbjct: 602 H 602
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 330/659 (50%), Gaps = 34/659 (5%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + +IK GL + L+S+++ + S+N+A ++F+ + K + TM+
Sbjct: 61 SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y N A+ M Y V+P + ++ +LK C + DL G+ IH ++
Sbjct: 121 GYAKNSSLETALAFLCRM-RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
+ M +++MY KC R++ D Y + ++ WN++++G Q GF
Sbjct: 180 ANVFAMTGVVNMYAKC----RQIDDAYKMFDRMPERDLVSWNTIIAGFSQ-------NGF 228
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI--------IVGCFECSCFT 249
K+ + L + G+ D + L +P V + I F
Sbjct: 229 AKKALELVLRMQ---DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+AL DMYS C + AR +FD V WNSM+ GYV N + E+AI +
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQ------KTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ G+ T AL AC +L + +F VH + D V ++LI +Y++
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERGKF---VHKFVDQLNLGSDISVMNSLISMYSK 396
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
V A ++F+ L + V+W+ +I+G ++G S A F +M + + F + SV
Sbjct: 397 CKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSV 456
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+ + L+ R K +H ++ +K T+L+DMY KCG I LF + +R V
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
++W +I G G +G + A+ F +M + ++PN+IT+L V+SAC H+GLV+E F S
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKS 576
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
MK +YGLEP ++HY MVDLLG+AG +A I MP P T++ +ML AC+ H N +
Sbjct: 577 MKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIE 636
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+ A++L +P++ +V+L+N+YA+ W +++VRK +K G KK G S +E+
Sbjct: 637 VGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 226/501 (45%), Gaps = 38/501 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG +K+GK +H ++I + ++F +++MYA ++DA+K+FD M +++
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T++ ++ N A+ L M + G P+ VL A + G L +G+ IH
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R + L DMY KCGS+ R +FD V WNSM+ G
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ------KTVVSWNSMMDGYVQ 326
Query: 185 -GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ A V + G + VT+ + G+++ G + F+ + ++ S +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+++L+ MYS C + A +F+ + + WN+MI GY N
Sbjct: 387 -----------MNSLISMYSKCKRVDIASDIFNNLNGRTHVS------WNAMILGYAQNG 429
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ EA+ S + S GM DS+T S + A L +R A +HGLI+ S + + V
Sbjct: 430 RVSEALNCFSEMKSLGMKPDSFTMVSVIPALAEL--SVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+Y++ G + A +LF + + V+ W+ +I G HGL A LF M
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 419 DVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ N SV+ CS + G + + G E +++D+ + G I +
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAW 607
Query: 478 ALFKFMPERDVVSWTGIIVGC 498
+ MP ++ G ++G
Sbjct: 608 DFIENMPISPGITVYGAMLGA 628
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+EAL C +++GK +H + + L DI N+L+SMY+ ++ A +F+ +
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ VSW M+ Y N R + A+ ++ M G ++P+ F +V+ A + +
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRHAK 470
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH I R L+ + + L+DMY KCG+ + RKLFD S+ +V WN+M+
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR------HVITWNAMID 524
Query: 184 GGKQVHAFC---------VKRG-FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G H +K+G E D+T S+I G +D+GL F M +
Sbjct: 525 -GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 196/675 (29%), Positives = 342/675 (50%), Gaps = 51/675 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKY---GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
C + R++ G +H ++ L ++ N+L++MY + A +FDEM KN
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ A+ N+R A+ L++ ML G+ P+ F + ++AC+ GD+ +GR +H
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTA-PDQFALGSTVRACAELGDIGVGRQVHA 166
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----G 185
+ + + D ++ N L+ MY K G + D + + + W S+++G G
Sbjct: 167 QAMKSENGSDLIVQNALVTMYSKSGLVA----DGFLLFGRMREKDPISWGSIIAGFAQQG 222
Query: 186 KQVHAFCVKRGFEKEDVTLTSLI---DMYLKCG-----EIDDGLALFNFMPERDVVSWTG 237
++ A + R E + + ++ CG E + + + D S+ G
Sbjct: 223 CEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAG 282
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG----NVALWNSMISG 293
CS L DMY+ C L A+++F YG ++ WNS+I+
Sbjct: 283 -------CS------LSDMYARCKKLESAKRVF----------YGIDAPDLVSWNSIINA 319
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
+ EA+ LLS + SG+ D T L AC+ + +H +V G +
Sbjct: 320 CSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAI--QHGRLMHSYLVKLGLD 377
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D V ++L+ +YAR + SA+++FH +DVV W+ ++ C +H + + LF +
Sbjct: 378 GDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLL 437
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
S +++ +++VL + L KQVH K G + + LID Y KCG +
Sbjct: 438 QRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSL 497
Query: 474 DDGLALFKFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
DD + LF+ M DV SW+ +IVG Q+G ++A+ F M ++PN +TF+GVL+A
Sbjct: 498 DDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTA 557
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C GLV+E ++ M+PE+G+ P EH C++DLL +AG +A + + +MPF+PD
Sbjct: 558 CSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIV 617
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L +THN+ ++ AE +L P + YV+L N+Y+ G W+ ++++KA +
Sbjct: 618 MWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMR 677
Query: 653 KLGEKKA-GMSWIEV 666
G KK+ G SW+++
Sbjct: 678 SSGVKKSPGKSWVKL 692
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 203/535 (37%), Gaps = 105/535 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R C + I G+ +H + +K D+ N L++MY+ + D LF M K+
Sbjct: 149 VRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDP 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +++ + A++++ M+ G PN F + +V AC + G L+ G IH
Sbjct: 209 ISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHS 268
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ +L++++ +L DMY +C +KL + ++ WNS+++
Sbjct: 269 LSVKYRLDHNSYAGCSLSDMYARC----KKLESAKRVFYGIDAPDLVSWNSIINACSVEG 324
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G+ +H++ VK G + +
Sbjct: 325 LLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCN 384
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
SL+ MY +C + + +F+ +RDVV+W I+ C
Sbjct: 385 SLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTAC----------------------- 421
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
V ++ E L + + S +D + +
Sbjct: 422 -----------------------------VQHQHLEVVFKLFNLLQRSLPSLDRISLNNV 452
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL-PK 384
L A L F QVH G D ++ + LID YA+ G++ A++LF +
Sbjct: 453 LSASAELGYF--EMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTN 510
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
DV +WS LI+G + G A LF M N N VL CS + + G
Sbjct: 511 SDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYY 570
Query: 445 HAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVG 497
++ + G + +ID+ + G + + MP E D+V W ++ G
Sbjct: 571 YSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAG 625
>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
Length = 767
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 213/702 (30%), Positives = 341/702 (48%), Gaps = 74/702 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+ +QGKS+H R+ S D+ L+ YA F + A K+FD M +++VSWT MV
Sbjct: 72 AFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMV 131
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ Y N RP A+ L+ M G+ PN F Y + AC+ +G G +H + +
Sbjct: 132 SGYARNGRPREALELFALMRASGA-RPNQFTYGSAASACAGAGCARSGEQVHACAAKGRF 190
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQY--------SNWA------ASAYGNVALWN- 179
D + + L+DM+++CGS+ R+LF + S+W S G+ +
Sbjct: 191 AGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVCCISSWQFPERQIRSTAGSPPVTAF 250
Query: 180 --------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+S A C + V+ T+++ Y + G + L LF
Sbjct: 251 PPDLHLRHQARHLLGAVSAKSPPPARCSMECPHRSLVSWTAMVSGYARNGRPREALELFA 310
Query: 226 FM------PER------------DVVSWTGIIV------GCFECSCFTLSALVDMYSNCN 261
M P + + +G V G F F SAL+DM+ C
Sbjct: 311 LMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCG 370
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +AR+LF A +V WN++I G+V + +A+ L S + M D YT
Sbjct: 371 SVEDARQLF------AEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYT 424
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
SALKAC ++ L +H I+ GY + +V +LI+ YA+ ++ SA ++
Sbjct: 425 LGSALKAC-GIVGVAVNVEL-IHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDS 482
Query: 382 LPKKDVVAWSGLIMGCT-KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ + D+V+ + LI G T + A LF + ++ ++SSVL +C+ +AS R
Sbjct: 483 ISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARF 542
Query: 441 GKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G Q+HA+ K+ DI L +L+DMY K GE D F MP R+V+SWT +I CG
Sbjct: 543 GTQIHAYMCKKQ-PMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACG 601
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+NG ++A+ F M++ ++PN++TFL +LSAC H GL + FTSM YG++P
Sbjct: 602 RNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMMSRYGIDPRA 661
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
EHY +DLL + G +DA +L+ + KP+ ++ +ML AC+ H N L A+ L +
Sbjct: 662 EHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLGETAAKNLFS 721
Query: 620 TSPEDPSKYVMLSNVYATLGMWDSLSKVRKA------GKKLG 655
P Y +L+N+YA +W+ + R+ GK++G
Sbjct: 722 IDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVG 763
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVT-SGYELDYIVGSNLIDLYARLGNVKSALELFH 380
F L CI+ F R VHG + S D + + L+ YAR G+V +A ++F
Sbjct: 60 FRFLLLCCISSCAF--RQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFD 117
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+P + VV+W+ ++ G ++G A LF M S NQF S C+ R
Sbjct: 118 GMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARS 177
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
G+QVHA K F + ++L+DM+L+CG ++D LF M ++DV
Sbjct: 178 GEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDV 225
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S + G +H + K DI N L+ MYA +DA + FDEM +N++SW
Sbjct: 534 CASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISW 593
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++TA N A+ L+N M+E G V PN + ++L AC G +T
Sbjct: 594 TSLITACGRNGSGEDAVTLFNRMVEDG-VRPNDVTFLSLLSACGHCG-----------LT 641
Query: 133 REKLEYDTVLMN 144
+ +EY T +M+
Sbjct: 642 NKGMEYFTSMMS 653
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGL 477
++N I +L C + R+GK VH D+ L T L+ Y + G++
Sbjct: 54 ELNLNIFRFLLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAAR 113
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F MP R VVSWT ++ G +NGR +EA+ F M S +PN+ T+ SAC AG
Sbjct: 114 KVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAG 173
Query: 538 LVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
+ + K + + ++ ++D+ + G +DA QL AEM
Sbjct: 174 CARSGEQVHACAAKGRFAGDMFVQS--ALMDMHLRCGSVEDARQLFAEM 220
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 316/638 (49%), Gaps = 35/638 (5%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+++H +K G + NNLL Y L DA +FDEM R+N+VSW+ ++ A +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 83 KRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
A+ L+ ML G + PN F +A++ C+ + D G +H + ++ D
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAA---SAYGNVALWNSML--------SGGKQVHA 190
+ TL+DMY KCG + S+W A + +V W SM+ SG +
Sbjct: 142 VAGTLVDMYAKCGRVG-------SSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAI 194
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
K+ + + LK ++ + +P V + +G E
Sbjct: 195 VLFKKMLVLKVWPTNATFSCILKVFDVPE------LLPSGKQVHGCLVKMGT-EVDPALG 247
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+AL+ MY C + D+ + A + S+++ Y N N EA+ + +
Sbjct: 248 TALLAMYGRCGGM-------DEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM 300
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
M ID TS L+ C +L R ++H + + + LD ++ + ++ +Y + G
Sbjct: 301 LMGHMPIDQSAITSLLQVCSSLGQL--RVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ S+ +F+ L KD ++W+ L+ ++ L+ A FR+M+ + + F I+SVL+
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS +SL G Q+H+ VK G + + +L+ MY KCG + L +F R ++S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIIS 478
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I Q+G AI F M + + P++ TF+G+LS+C GLV E F MK
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+Y LEP +EHY CMVDL +AG F DA + I MP +PD+ +W ++L +C H N L
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLG 598
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+ A+++L PEDPS Y++LS+++A++ MWD ++ R
Sbjct: 599 RMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNR 636
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 201/521 (38%), Gaps = 121/521 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + G+ +H +K G+ +D L+ MYA + + + F +++++SW
Sbjct: 115 CARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSW 174
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ ++ + AI L+ ML V P +S +LK + L G+ +H
Sbjct: 175 TSMIACLVNHGDSGYRDTAIVLFKKMLVL-KVWPTNATFSCILKVFDVPELLPSGKQVHG 233
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYSNWA-ASAYGN------- 174
+ + E D L LL MY +CG + R D +S + +AY
Sbjct: 234 CLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEA 293
Query: 175 VALWNSMLSGG------------------------KQVHAFCVKRGFEKEDVTLTSLIDM 210
V ++ ML G K++H + +K F + + L +++ +
Sbjct: 294 VRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTV 353
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF---------------------ECSCFT 249
Y KCG+I +FN + +D +SWT ++ C+ E S F
Sbjct: 354 YGKCGDIASSEIVFNTLENKDTISWTALLT-CYVQNDLSQEALFFFREMVRKGLESSIFC 412
Query: 250 LS-----------------------------------ALVDMYSNCNVLCEARKLFDQYS 274
++ ALV MY+ C V+ A K+F+
Sbjct: 413 ITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFN--- 469
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
++ + WN++I+ + + AI L + +C D YTF L +C
Sbjct: 470 ---STRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSC----- 521
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDV 387
SR L G + Y + ++DL+AR G A++ +P + D
Sbjct: 522 --SRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ 579
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISS 427
+ W L+ C HG L + + ++ +D + +II S
Sbjct: 580 LVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L+ C ++ K +HC +K D N ++++Y + + +
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ + K+ +SWT ++T Y N A+ + M+ G +E + F ++VL+ACS +
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG-LESSIFCITSVLRACSATSS 425
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAA---- 169
L G IH R+ + ++ DT + N L+ MY KCG + K+F+ N W A
Sbjct: 426 LSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITS 485
Query: 170 -SAYGN----VALWNSM-------------------------LSGGKQVHAFCVKRGFEK 199
S +GN + L++ M G + K E
Sbjct: 486 FSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEP 545
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+ T ++D++ + G D + + MP + D + W ++ C
Sbjct: 546 KMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/609 (30%), Positives = 322/609 (52%), Gaps = 28/609 (4%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M +N VS+ T++ Y + + + + L++ + G E N F+++ +LK +L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGH-ELNPFVFTTILKLLVSVECAEL 59
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-NWAASAYGNVALW-- 178
+H I + E + + L+D Y CGS+ R+ FD + S G VA +
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N Q+ A GF T ++ + GL F+ S G
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI-------GLEAFSVGK-----SVHGC 167
Query: 239 IVG-CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ C+E + L+D+Y+ + ++F++ +V W+ MIS Y +
Sbjct: 168 VLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPK------HDVIPWSFMISRYAQS 221
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
Q+ EA+ L + + + + +TF S L++C ++ N + QVH ++ G + +
Sbjct: 222 NQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENL--QLGKQVHCHVLKVGLDGNVF 279
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + L+D+YA+ G + ++++LF LP ++ V W+ +I+G + G A L+++M+
Sbjct: 280 VSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
++ SSVL+ C+ LA++ G Q+H+ +K ++K+ + +LIDMY KCG I +
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F + ERD +SW +I G +G EA+ FQ M ++ PN++TF+ +LSAC +AG
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
L++ F SM +YG+EP +EHY CMV LLG++G D A +LI E+P +P+ +W ++
Sbjct: 460 LLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRAL 519
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK 657
L AC HN+ L + A+Q+L P+D + +V+LSN+YA W+S++ VRK K G K
Sbjct: 520 LGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVK 579
Query: 658 K-AGMSWIE 665
K G+SWIE
Sbjct: 580 KEPGLSWIE 588
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 219/536 (40%), Gaps = 119/536 (22%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH I K G + F G L+ YA S+N A + FD +A K++VSWT MV Y N
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
R +++L+ M G PN F ++ VLKAC +G+ +H + + E D +
Sbjct: 122 RFQDSLQLFAEMRMVG-FNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 144 NTLLDMYVKCGSLTR--KLFDQY------------SNWAASAYGN--VALWNSM------ 181
LLD+Y K G ++F++ S +A S V L+ M
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 182 ------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
L GKQVH +K G + +L+D+Y KCG +D+ + L
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 224 FNFMPERDVVSWTGIIVG----------------CFEC--------------SCFTLS-- 251
F +P R+ V+W +IVG EC +C +L+
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 252 -----------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
AL+DMY+ C + AR +FD S + WN
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEIS------WN 414
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGL 346
+MISGY ++ EA+ + + + TF S L AC N LL+ + +
Sbjct: 415 AMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNY---FKSM 471
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSL 405
+ G E + ++ L R G++ A++L +P + +V W L+ C H L
Sbjct: 472 VQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDL 531
Query: 406 AYLLFRDM--INSNQDVNQFIISSV---LKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ + + I+ + ++S++ + + +AS+R+ F +G +KE
Sbjct: 532 GIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRK------FMKNKGVKKE 581
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 287/561 (51%), Gaps = 83/561 (14%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L K +HA ++ FE +D++L L+ +Y+K G + + +F+ MP ++VVSWT +I
Sbjct: 80 LPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIA 139
Query: 241 ----------------------------------------------------GCFECSCF 248
G FE + F
Sbjct: 140 AYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVF 199
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ LVDMY+ + AR+LFD+ +V WN+MI+GYV N E+A+ L
Sbjct: 200 VGNGLVDMYAKRGCIEFARELFDKMPQR------DVVSWNAMIAGYVQNGLIEDALKLFQ 253
Query: 309 HIHSSGMCIDSYTFTSALKAC---------------INLLNFNSRFALQVHGLIVTSGYE 353
I + I T + C NL+++N+ A V V ++
Sbjct: 254 EIPKRDV-ITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFK 312
Query: 354 L-------DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
L + I + +I +A+ G V+ AL+LF +P+ +VV+W+ +I G +++G A
Sbjct: 313 LFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENA 372
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF M + N + VL C+ LA L +G + H ++ GF+ + + +L+ M
Sbjct: 373 LKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGM 432
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I+D +F M ++D S + +IVG NG +KE++ F++M + LKP+ +TF
Sbjct: 433 YAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTF 492
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+GVLSAC HAGLV+E F M Y + P +EHY CM+DLLG+AGCFD+A LI +MP
Sbjct: 493 VGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMP 552
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
KPD +W S+L AC THNN L +A+ L+A +P++P+ YV+LSN+YA G WD +
Sbjct: 553 IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGS 612
Query: 647 VRKAGK-KLGEKKAGMSWIEV 666
VR K + +KK G SWI +
Sbjct: 613 VRNRMKDRKVKKKLGCSWIVI 633
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 250/517 (48%), Gaps = 48/517 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C +S+ K LH +I+ QDI GN L+S+Y SL +A ++FDEM KN
Sbjct: 71 LQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKN 130
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT M+ AY ++ A+ + M + G ++PN F ++++L AC+ DL++ H
Sbjct: 131 VVSWTAMIAAYARHEHGQEALGFFYEMQDVG-IQPNHFTFASILPACT---DLEVLGEFH 186
Query: 129 ERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ I + E + + N L+DMY K C R+LFD+ +V WN+M++G
Sbjct: 187 DEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQ------RDVVSWNAMIAGYV 240
Query: 185 --GKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
G A + + K DV T +++ Y +CG++++ + LF MPE+++VSW +I G
Sbjct: 241 QNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAG 300
Query: 242 CF----------------ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
E + + +A++ ++ + EA KLF NV
Sbjct: 301 YVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPEC------NVV 354
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN+MI+GY N Q E A+ L + M ++ TF L AC L + H
Sbjct: 355 SWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQ--GNEAHE 412
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+++ SG++ D +VG+ L+ +YA+ G+++ A ++F R+ ++D + S +I+G +G +
Sbjct: 413 VVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKE 472
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS--- 462
+ LF M + ++ VL C + G+Q F + F +
Sbjct: 473 SLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQY--FDIMTRFYHITPAMEHYGC 530
Query: 463 LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ID+ + G D+ L MP + D W ++ C
Sbjct: 531 MIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSAC 567
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
GL+ K G A + +DM+ + + S+L+ C SL K +HA ++
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 452 GFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
FE +DI+L L+ +Y+K G + + +F MP ++VVSWT +I ++ +EA+ +
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F EM ++PN TF +L AC ++ E F + G E ++ +VD+
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMYA 209
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ GC + A +L +MP + D W +M+
Sbjct: 210 KRGCIEFARELFDKMPQR-DVVSWNAMI 236
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 325/655 (49%), Gaps = 34/655 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-NIVSWTTMVTAYT 80
+ H RI + G +D+ GN ++SMYA + A +F + K +++SW TM+ A
Sbjct: 354 ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-D 139
K + ++HML G ++PN + A+L ACS S LD GR IH I + +Y +
Sbjct: 414 DRKSFGKVVNTFHHMLLAG-IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472
Query: 140 TVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
+ + L+ MY KCGS++ +F + + S + WN ML Q
Sbjct: 473 SSVATMLVSMYGKCGSISEAELVFKEMPLPSRS----LVTWNVMLGAYAQ---------N 519
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-----ERDVVSWTGIIVGCFECSCFTLSA 252
++ +L++M L+ G + D L+ + + + V I+ + +C +A
Sbjct: 520 DRSKEAFGALMEM-LQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE-TA 577
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ M+ C L +AR +F++ +G+V W +M+S N +E L +
Sbjct: 578 LISMHGRCRELEQARSVFNEMD------HGDVVSWTAMVSATAENRDFKEVHNLFRRMQL 631
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D +T + L C+ +H + G E D V + L+++Y+ G+
Sbjct: 632 EGVIPDKFTLATTLDTCLASTTLG--LGKVIHACVTEIGLEADIAVENALLNMYSNCGDW 689
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ AL F + +D+V+W+ + + GL A LLFR M ++ S+ L V
Sbjct: 690 REALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVS 749
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
A + GK HA + G + + T L+ +Y KCG++D+ ++LF+ + VV
Sbjct: 750 GGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLN 809
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II Q+G ++EA+ F +M Q ++P+ T + ++SAC HAG+VEE + F +MK
Sbjct: 810 AIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEY 869
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G+ P LEHY C VDLLG+AG + AEQ+I +MPF+ + +W S+L C+ + +L
Sbjct: 870 FGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGER 929
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
A+++L P + + +V+LSN+Y G W RK K A GMSW E+
Sbjct: 930 CAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEI 984
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 184/691 (26%), Positives = 300/691 (43%), Gaps = 76/691 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL+ L+ C + +GK H I GL Q +F GN L++MY SL +AH +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M +N+VSWT +++A A L+ ML S PN + A+L AC+ S DL
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 122 DLGRLIHERITREKLEY----DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
+GR IH I LE T++ N +++MY KCGSL D + + A +V
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLE----DAIAVFLAIPEKDVVS 199
Query: 178 WNSMLSGGKQVHAFCVK--RGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPER 230
W +M Q F R F + + + + I C + DG L + + E
Sbjct: 200 WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHE- 258
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+AL++MY C + + + + A+ ++ WN+M
Sbjct: 259 ----------ASLGFDPLASNALINMYGKCG---DWEGAYSVFKAMASRQELDLVSWNAM 305
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA-CINLLNFNSRFALQVHGLIVT 349
IS V ++ +A+ + + GM +S T + L A + ++F + A HG I
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA--ARGFHGRIWE 363
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYL 408
SGY D ++G+ +I +YA+ G +A +F R+ K DV++W+ ++
Sbjct: 364 SGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK-EDITLTSLIDMY 467
F M+ + D N+ ++L CS +L G+++H+ + R + E T L+ MY
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMY 483
Query: 468 LKCGEIDDGLALFKFM--PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
KCG I + +FK M P R +V+W ++ QN R+KEA EM+Q + P+ ++
Sbjct: 484 GKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543
Query: 526 FLGVLSAC------------------RHAGL-------------VEEAWTIFTSMKPEYG 554
F VLS+C R A L +E+A ++F M ++G
Sbjct: 544 FTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEM--DHG 601
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK---PDKTIWASMLKACETHNNTKLVS 611
+ + MV + F + L M + PDK A+ L C L
Sbjct: 602 ---DVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGK 658
Query: 612 IIAEQLLATSPE-DPSKYVMLSNVYATLGMW 641
+I + E D + L N+Y+ G W
Sbjct: 659 VIHACVTEIGLEADIAVENALLNMYSNCGDW 689
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 170/680 (25%), Positives = 290/680 (42%), Gaps = 117/680 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT----GNNLLSMYADFTSLNDAHKLF 61
+V L C R + G+S+H I + GL + T GN +++MYA SL DA +F
Sbjct: 130 LVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVF 189
Query: 62 DEMARKNIVSWTTMVTAYTSNKR--PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ K++VSWT M AY +R P+ A+R++ ML + PN + L AC+
Sbjct: 190 LAIPEKDVVSWTAMAGAYAQERRFYPD-ALRIFREML-LQPLAPNVITFITALGACT--- 244
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L G +H + L +D + N L++MY KCG + + A+ ++ WN
Sbjct: 245 SLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDW-EGAYSVFKAMASRQELDLVSWN 303
Query: 180 SMLS----GGKQVHAFCVKR-----GFEKEDVTL-------------------------- 204
+M+S G+ A + R G VTL
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWE 363
Query: 205 ----------TSLIDMYLKCGEIDDGLALFNFMPER-DVVSWT------------GIIVG 241
++I MY KCG A+F + + DV+SW G +V
Sbjct: 364 SGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 242 CF--------ECSCFTLSALVDMYSNCNVLCEARKLF------------DQYSSWAASAY 281
F + + + A+++ SN L RK+ ++ S Y
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMY 483
Query: 282 G--------------------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
G ++ WN M+ Y N++++EA L + G+ D+ +
Sbjct: 484 GKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
FTS L +C + S+ A + I+ SGY + + LI ++ R ++ A +F+
Sbjct: 544 FTSVLSSC-----YCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNE 597
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ DVV+W+ ++ ++ + LFR M ++F +++ L C +L G
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG 657
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K +HA + G E + +L++MY CG+ + L+ F+ M RD+VSW + Q
Sbjct: 658 KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G AKEA+ F++M +KP+++TF L+ + LV + +F ++ E GL+ +
Sbjct: 718 GLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSV 776
Query: 562 YYCMVDLLGQAGCFDDAEQL 581
+V L + G D+A L
Sbjct: 777 ATGLVKLYAKCGKLDEAMSL 796
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C ++ GK +H + + GL DI N LL+MY++ +A F+ M
Sbjct: 641 LATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMK 700
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VSW M AY A+ L+ M G V+P+ +S L S + G+
Sbjct: 701 ARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEG-VKPDKLTFSTTLNVSGGSALVSDGK 759
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
L H L+ D + L+ +Y KCG L LF +W V L N+++
Sbjct: 760 LFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDW------TVVLLNAIIG 813
Query: 184 GGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
Q H F + G + TL S+I G +++G + F M E +
Sbjct: 814 ALAQ-HGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGI 872
Query: 234 SWTGIIVGCF 243
S T CF
Sbjct: 873 SPTLEHYACF 882
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 264/487 (54%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K GF+ + TSLI MY++ G ++D + + RDVVS+T +I G
Sbjct: 122 GQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG--- 178
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A K+FD+ +V WN+ ISGY +EA+
Sbjct: 179 ------------YASRGXIESAHKMFDEI------PVKDVVSWNAXISGYAETGNYKEAL 220
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + L AC + + QVH I G+ + + + LID
Sbjct: 221 ELFKKMMKTNVRPDESTMVTVLSACAQ--SGSIELGRQVHSWINDHGFGXNLKIVNALID 278
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G +++A LF L KDV++W+ LI G T L A LLF+DM+ S + N
Sbjct: 279 LYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVT 338
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 339 MLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M R + SW +I G +GRA A F M ++ ++P++ITF+G+LSAC H+G+++
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y L P LEHY CM+DL G +G F +AE++I M +PD IW S+LKAC+
Sbjct: 459 RHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACK 518
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+ L+ PE+P YV+LSN+YAT W+ ++K R G KK G
Sbjct: 519 MHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGC 578
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 579 SSIEIDS 585
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 181/390 (46%), Gaps = 36/390 (9%)
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
+WN+M G+ L+ A+ L + S G+ +SYTF LK+C F Q+HG
Sbjct: 70 IWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKE--GQQLHG 127
Query: 346 LIVTSGYELDYIVGSNLIDL-------------------------------YARLGNVKS 374
++ G++LD + ++LI + YA G ++S
Sbjct: 128 QVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ++F +P KDVV+W+ I G + G A LF+ M+ +N ++ + +VL C+
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
S+ G+QVH++ GF + +LID+Y KCGE++ LF+ + +DV+SW +
Sbjct: 248 SGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTL 307
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEY 553
I G KEA+ FQ+M++S KPN++T L +LSAC H G ++ W K
Sbjct: 308 IGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLK 367
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+ ++D+ + G + A+Q+ M + W +M+ H I
Sbjct: 368 GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANAAFDI 426
Query: 614 AEQLLATSPE-DPSKYVMLSNVYATLGMWD 642
++ E D +V L + + GM D
Sbjct: 427 FSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 197/441 (44%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + K+G+ LH +++K+G D++ +L+SMY L DA K+ D+ + +++
Sbjct: 110 LKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDV 169
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 170 VSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK- 228
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ VL AC+ SG ++LGR +H I + ++N L+D+Y KCG L
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF SN +V WN+++ G ++ + ++ G + DVT+ S+
Sbjct: 289 ACGLFQGLSN------KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSI 342
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A+
Sbjct: 343 LSACAHLGAIDIGRWIHVYIDKR--------LKGVTNASSLRTS-LIDMYAKCGDIEAAQ 393
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD + + S+ WN+MI G+ ++ + A + S + +G+ D TF L
Sbjct: 394 QVFDSMLNRSLSS------WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 447
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + DY + L IDL G K A ++ +
Sbjct: 448 AC-------SHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINT 500
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+ + D V W L+ C HG
Sbjct: 501 MEMEPDGVIWCSLLKACKMHG 521
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/581 (20%), Positives = 225/581 (38%), Gaps = 139/581 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + LL + F L A +FD + ++ W
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWN 72
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P A++LY M+ G + PN + + +LK+C+ S G+ +H ++ +
Sbjct: 73 TMFRGHALSSDPVSALKLYVCMVSLGLL-PNSYTFPFLLKSCAKSXAFKEGQQLHGQVLK 131
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAY------------------- 172
+ D + +L+ MYV+ G L +K+ D+ S+ +Y
Sbjct: 132 FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKM 191
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+ +SG
Sbjct: 192 FDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSI 251
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH++ GF + +LID+Y KCGE++ LF + +DV+SW +I G
Sbjct: 252 ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG- 310
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ +E
Sbjct: 311 --------------YTHMNLY-------------------------------------KE 319
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + SG + T S L AC +L + + V+ G + ++L
Sbjct: 320 ALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 379
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA+ G++++A ++F + + + +W+ +I G HG + A+ +F M + + +
Sbjct: 380 IDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 439
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL------IDMYLKCGEIDDG 476
+L CS L G+ H F R ++ + L ID+ G +
Sbjct: 440 ITFVGLLSACSHSGMLDLGR--HIF---RSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEA 494
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ M E D V W ++ C +G + +Y Q +I+
Sbjct: 495 EKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIK 535
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 42/350 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C Q SI+ G+ +H I +G ++ N L+ +Y+ L A LF
Sbjct: 234 DESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLF 293
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ K+++SW T++ YT A+ L+ ML G +PN ++L AC+ G +
Sbjct: 294 QGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGE-KPNDVTMLSILSACAHLGAI 352
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L +L+DMY KCG + +++FD N + S+
Sbjct: 353 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS------ 406
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ AF + K G E +D+T L+ G +D G +F M
Sbjct: 407 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----A 277
+ GC ++D+ + + EA K+ + W A
Sbjct: 467 RDYKLMPKLEHYGC----------MIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA 516
Query: 278 ASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+GNV L S + + +N + LLS+I+++ + T AL
Sbjct: 517 CKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRAL 566
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 146/327 (44%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S L++ L + A+ +F + + ++ W+ + G
Sbjct: 21 IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRG--- 77
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ M++ N + +LK C+ + + G+Q+H +K GF+ +
Sbjct: 78 HALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLD 137
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV-------------------- 496
TSLI MY++ G ++D + RDVVS+T +I
Sbjct: 138 LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPV 197
Query: 497 -----------GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
G + G KEA+ F++M+++ ++P+E T + VLSAC +G +E +
Sbjct: 198 KDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV 257
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L + K D W +++ TH
Sbjct: 258 HSWIN-DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGG-YTHM 314
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 315 NLYKEALLLFQDMLRSGEKPNDVTMLS 341
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 324/658 (49%), Gaps = 38/658 (5%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H I K G D+ L++MY SL A K+F+EM +N+VSWT M++ Y
Sbjct: 171 GEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 230
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A L+ ++ G+ +PN ++++L AC+ DL+ G +H I + LE + +
Sbjct: 231 HGDSKEAFVLFQKLIRSGT-QPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVL 289
Query: 142 LMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG---GKQVHAFCV--- 193
+ N L+ MY +CGSL R++FD + N WN+M++G G AF +
Sbjct: 290 VGNALISMYARCGSLANARQVFDNLRS------PNRVSWNAMIAGYGEGFMEEAFRLFRD 343
Query: 194 --KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
++GF+ + T SL+ + +++ G L + I+ +E +
Sbjct: 344 MQQKGFQPDRFTYASLLAICADRADLNRGKELH-----------SQIVRTAWEADVTVAT 392
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
AL+ MY+ C L EARK+F+Q N WN+ I+ + +EA + +
Sbjct: 393 ALISMYAKCGSLEEARKVFNQMPE------KNAVSWNAFIACCCRHGSEKEAFQVFKQMR 446
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+ D TF + L +C + +F +HG I G + +V + LI +Y R G
Sbjct: 447 RDDVIPDHVTFITLLNSCTSPEDFER--GRYIHGKIDQWGMLSNNLVANALISMYGRCGK 504
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ A E+F+R+ ++D+ +W+ +I +HG N A+ LF + +++ +VL+
Sbjct: 505 LADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRA 564
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ L L G+++H K G EK+ LT+LI MY KCG + D ++FK + E+DVV W
Sbjct: 565 IANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCW 624
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
++ + ++A+ FQ+M + P+ T+ VL+AC G +E T +K
Sbjct: 625 NAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLK- 683
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
E +E HY CMV LG+A +AE+ I E+ + D +W S+L AC H+N L
Sbjct: 684 EAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAE 743
Query: 612 IIAEQLLATSPE-DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
E LL + P+ L N+YA G W+ +S ++ ++ G IEV+S
Sbjct: 744 TAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSCTIEVNS 801
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/643 (27%), Positives = 300/643 (46%), Gaps = 43/643 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C Q +S+ +GK +H + DI+ N L+SMY+ S+ DA+ +F M K++
Sbjct: 58 LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW M++ Y + R A+ L+ M G ++PN + ++L AC L+ G IH
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREG-LKPNQNSFISILSACQTPIVLEFGEQIHS 176
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
IT+ E D + L++MY KCGS L RK+F++ NV W +M+SG
Sbjct: 177 HITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRE------RNVVSWTAMISGYVQ 230
Query: 185 -GKQVHAFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G AF ++ G + V+ S++ +++ GL L ++ + + +
Sbjct: 231 HGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQ--EV 288
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG +AL+ MY+ C L AR++FD S N WN+MI+GY
Sbjct: 289 LVG---------NALISMYARCGSLANARQVFDNLRS------PNRVSWNAMIAGYGEGF 333
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EEA L + G D +T+ S L C + + N ++H IV + +E D V
Sbjct: 334 M-EEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNR--GKELHSQIVRTAWEADVTV 390
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LI +YA+ G+++ A ++F+++P+K+ V+W+ I C +HG A+ +F+ M +
Sbjct: 391 ATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ ++L C+ RG+ +H + G ++ +LI MY +CG++ D
Sbjct: 451 IPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADARE 510
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + RD+ SW +I Q+G A F + K ++ TF+ VL A +
Sbjct: 511 VFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLED 570
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++ I + + GLE + ++ + + G DA + + K D W +ML
Sbjct: 571 LDAGRKIH-GLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEK-DVVCWNAML 628
Query: 599 KACE--THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
A H L +L +P D + Y + N A LG
Sbjct: 629 AAYNHSDHGQDALKLFQQMRLEGVNP-DSATYTSVLNACARLG 670
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/587 (25%), Positives = 256/587 (43%), Gaps = 108/587 (18%)
Query: 65 ARKNIVSWTTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
R+ I + A R W +IR +L V+ N Y+ L+ C + L
Sbjct: 8 GRRRIQESGSTWDASAKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSL 67
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ +H+ + + E D L N L+ MY KCGS+ D + + + +V WN+M
Sbjct: 68 AEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE----DANNVFQSMEDKDVVSWNAM 123
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+SG G+Q+H+ K G+
Sbjct: 124 ISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGY 183
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E + T+LI+MY KCG ++ +FN M ER+VVSWT +I G
Sbjct: 184 ESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISG---------------- 227
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
YV + ++EA L + SG
Sbjct: 228 ------------------------------------YVQHGDSKEAFVLFQKLIRSGTQP 251
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ +F S L AC N + L++H I +G E + +VG+ LI +YAR G++ +A +
Sbjct: 252 NKVSFASILGACTNPNDLEQ--GLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQ 309
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F L + V+W+ +I G + G A+ LFRDM ++F +S+L +C+ A
Sbjct: 310 VFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRAD 368
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L RGK++H+ V+ +E + T+LI MY KCG +++ +F MPE++ VSW I
Sbjct: 369 LNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIAC 428
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
C ++G KEA F++M + + P+ +TF+ +L++C E I + ++G+
Sbjct: 429 CCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKID-QWGMLS 487
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+ ++ + G+ G DA ++ + + D W +M+ A H
Sbjct: 488 NNLVANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAAYVQH 533
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + LR + G+ +H + K GL +DI L+ MY+ SL DA+ +F
Sbjct: 554 DKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVF 613
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ K++V W M+ AY + A++L+ M G V P+ Y++VL AC+ G +
Sbjct: 614 KNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEG-VNPDSATYTSVLNACARLGAI 672
Query: 122 DLGRLIHERITREKLEYDT 140
+ G+ H ++ +E DT
Sbjct: 673 EHGKKFHTQLKEAAMETDT 691
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 199/759 (26%), Positives = 352/759 (46%), Gaps = 110/759 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY----------------- 48
+ +ALR CG R ++ ++LH R+I GL+ +F N LL Y
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 49 ---------------ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
A SL+DA +LF M +++ SW T+++ Y + + A+ ++
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M + G PN F + V+K+C G ++ + +++ + D + L+DM V+C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207
Query: 154 GSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-----CVKRGFEKEDVTLTS 206
G++ K F + N + NSML G + H K E++ V+
Sbjct: 208 GAMDFASKQFSRIKN------PTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNM 261
Query: 207 LIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCFECSC--------------- 247
+I K G + + L + M + D ++T + C S
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL 321
Query: 248 -----FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ SA+V++Y+ C EA+++F N W +I G++ E
Sbjct: 322 PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR------NSVSWTVLIGGFLQYGCFSE 375
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
++ L + + + M +D + + + C N ++ Q+H L + SG+ +V ++L
Sbjct: 376 SVELFNQMRAELMAVDQFALATLISGCCNTMDIC--LGSQLHSLCLKSGHTRAVVVSNSL 433
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK----------------------- 399
I +YA+ GN+++A +F+ + ++D+V+W+G+I ++
Sbjct: 434 ISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWN 493
Query: 400 --------HGLNSLAYLLFRDMINSNQDVNQFII-SSVLKVCSCLASLRRGKQVHAFCVK 450
HG ++ DM+ + ++ ++ + C+ + + + G Q+ VK
Sbjct: 494 AMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVK 553
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G + + ++I MY KCG I + F F+ +D+VSW +I G Q+G K+AI
Sbjct: 554 VGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEI 613
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F +++ KP+ I+++ VLS C H+GLVEE F MK ++ + P LEH+ CMVDLLG
Sbjct: 614 FDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLG 673
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG +A+ LI EMP KP +W ++L AC+TH N L + A+ L Y++
Sbjct: 674 RAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYML 733
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
L+ +YA G D ++VRK + G KK+ G SW+EV++
Sbjct: 734 LAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNN 772
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 271/491 (55%), Gaps = 30/491 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K GF+ + TSLI MY + G ++D +F+ RDVVS+T +I G
Sbjct: 94 GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG--- 150
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+K+FD+ +V WN+MISGY ++A+
Sbjct: 151 ------------YASRGYIESAQKMFDEI------PIKDVVSWNAMISGYAETGNYKKAL 192
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + + LID
Sbjct: 193 ELFKEMMKTNVKPDESTMATVVSACAQ--SGSIELGRQVHSWINDHGFGSNLKIVNALID 250
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A EL L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 251 LYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 310
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDIT--LTSLIDMYLKCGEIDDGLALF 480
+ S+L C+ L ++ G+ +H + K+ G + + TSLIDMY KCG+ID +
Sbjct: 311 MLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVS 370
Query: 481 KFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
R + +W +I G +GRA A F M ++ ++P++ITF+G+LSAC H+G++
Sbjct: 371 DSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 430
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ IF SM+ +Y + P LEHY CM+DLLG +G F +AE++I MP +PD IW S+LK
Sbjct: 431 DLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 490
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC+ H N +L A++L+ PE+P YV+LSN+YAT G W+ + K+R G KK
Sbjct: 491 ACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKK 550
Query: 659 -AGMSWIEVSS 668
G S IE+ S
Sbjct: 551 VPGCSSIEIDS 561
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 204/442 (46%), Gaps = 77/442 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ K+G+ +H ++K G D++ +L+SMYA L DA K+FD + +++
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 70 VSWTTMVTAYTS-----------NKRP-----NW---------------AIRLYNHMLEY 98
VS+T ++T Y S ++ P +W A+ L+ M++
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V+P+ + V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG +
Sbjct: 202 -NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 159 --KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
+L + SN +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 261 ACELLEGLSN------KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 314
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ ++ G++V + ++L+DMY+ C + A
Sbjct: 315 LPACAHLGAIDIGRWIHVYIDKK----LKGVVV---TNASSLRTSLIDMYAKCGDIDAAP 367
Query: 268 KLFDQYSSWAASAYG-NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++ D +SA+ +++ WN+MI G+ ++ + A + S + +G+ D TF L
Sbjct: 368 QVSD------SSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 421
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFH 380
AC S + G + DY + L IDL G K A E+ +
Sbjct: 422 SAC-------SHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMIN 474
Query: 381 RLP-KKDVVAWSGLIMGCTKHG 401
+P + D V W L+ C HG
Sbjct: 475 TMPMEPDGVIWCSLLKACKIHG 496
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/556 (21%), Positives = 212/556 (38%), Gaps = 157/556 (28%)
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
F L A +F+ + N + W M + + P A++LY M+ G + PN F +
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLL-PNFFTFPF 80
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-- 166
+LK+C+ S G+ IH + + + D + +L+ MY + G L +K+FD+ S+
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 167 ----------WAASAY-------------GNVALWNSMLSG------------------- 184
+A+ Y +V WN+M+SG
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 185 -------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
G+QVH++ GF + +LID+Y KCGE++
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
L + +DV+SW +I G Y++ N+ EA LF +
Sbjct: 261 ACELLEGLSNKDVISWNTLIGG---------------YTHMNLYKEALLLFQE------- 298
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ SG + T S L AC +L +
Sbjct: 299 ------------------------------MLRSGETPNDVTMLSILPACAHLGAIDIGR 328
Query: 340 ALQVH------GLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL-----FHRLPKKDVV 388
+ V+ G++VT+ L ++LID+YA+ G++ +A ++ F+R +
Sbjct: 329 WIHVYIDKKLKGVVVTNASSLR----TSLIDMYAKCGDIDAAPQVSDSSAFNR----SLS 380
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ +I G HG + A+ +F M + + + +L CS L G+ +
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440
Query: 449 VKRGFEKEDITLTS-------LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
++D +T +ID+ G + + MP E D V W ++ C
Sbjct: 441 ------RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 494
Query: 501 NGRAKEAIAYFQEMIQ 516
+G + ++ +++I+
Sbjct: 495 HGNLELGESFAKKLIK 510
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 43/329 (13%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C Q SI+ G+ +H I +G ++ N L+ +Y+ + A +L + ++ K+++SW
Sbjct: 217 CAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISW 276
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T++ YT A+ L+ ML G PN ++L AC+ G +D+GR IH I
Sbjct: 277 NTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYID 335
Query: 133 REKLEYDTV-----LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-NVALWNSMLSG-- 184
+ KL+ V L +L+DMY KCG + Q S+ +SA+ +++ WN+M+ G
Sbjct: 336 K-KLKGVVVTNASSLRTSLIDMYAKCGDIDAA--PQVSD--SSAFNRSLSTWNAMIFGFA 390
Query: 185 --GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
G+ AF + K G E +D+T L+ G +D G +F M + ++
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKL 450
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AASAYGNVAL 286
GC ++D+ + + EA ++ + W A +GN+ L
Sbjct: 451 EHYGC----------MIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 500
Query: 287 WNSMISGYV-LNEQNEEAITLLSHIHSSG 314
S + + +N + LLS+I+++
Sbjct: 501 GESFAKKLIKIEPENPGSYVLLSNIYATA 529
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 40/292 (13%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNS---LAYLLFRDMINSNQDVNQFIISSVLKV 431
A+ +F +P+ + + W+ + G H L+S A L+ MI+ N F +LK
Sbjct: 28 AISVFETIPEPNQLIWNIMFRG---HALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ + + G+Q+H +K GF+ + TSLI MY + G ++D +F RDVVS+
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 492 TGIIV-------------------------------GCGQNGRAKEAIAYFQEMIQSRLK 520
T +I G + G K+A+ F+EM+++ +K
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+E T V+SAC +G +E + + + ++G +L+ ++DL + G + A +
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWIN-DHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
L+ + K D W +++ TH N +++ Q + S E P+ MLS
Sbjct: 264 LLEGLSNK-DVISWNTLIGGY-THMNLYKEALLLFQEMLRSGETPNDVTMLS 313
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 280/517 (54%), Gaps = 32/517 (6%)
Query: 158 RKLFDQYSN--WAASAYGNVALWNSM----LSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
++ FD++S+ W+ + + L + + LS GKQ+H+ + G + L+++Y
Sbjct: 38 KQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLY 97
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
KCG++D + LF MP ++++S +I G F + ARK+FD
Sbjct: 98 SKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWV---------------TARKMFD 142
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ NVA WN+M++G + E NEE + L S ++ G D + S L+ C
Sbjct: 143 EMPE------RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAG 196
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + QVHG + G+E + +V S+L +Y + G++ L +P ++VVAW+
Sbjct: 197 LRALVA--GRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWN 254
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI G ++G + M + ++ SV+ CS LA+L +G+Q+HA +K
Sbjct: 255 TLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKA 314
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G ++SLI MY +CG ++ L +F DVV W+ +I G +GR EAI F
Sbjct: 315 GASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLF 374
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+M Q +L+ N++TFL +L AC H GL E+ F M +YG++P LEHY CMVDLLG+
Sbjct: 375 NQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGR 434
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G ++AE LI MP K D W ++L AC+ H T++ I+E++ P DP YV+L
Sbjct: 435 YGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLL 494
Query: 632 SNVYATLGMWDSLSKVRKA--GKKLGEKKAGMSWIEV 666
SN++A+ WD +S VRKA +KL +K+ G+SW+EV
Sbjct: 495 SNIHASDKRWDDVSDVRKAMRDRKL-KKEPGISWLEV 530
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 137/561 (24%), Positives = 226/561 (40%), Gaps = 127/561 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S+ GK LH II G S D F N+LL++Y+ L+ A LF M RKNI
Sbjct: 59 LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNI 118
Query: 70 VS-------------------------------WTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+S W MV + + L++ M E
Sbjct: 119 MSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNEL 178
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G + P+ F +VL+ C+ L GR +H + + E++ V++++L MY+KCGSL
Sbjct: 179 GFL-PDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLG- 236
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
+ A NV WN++++G Q G+ +E ++D Y
Sbjct: 237 ---EGERLIRAMPSQNVVAWNTLIAGRAQ-------NGYPEE------VLDQY------- 273
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCF--------------------TLSALVDMYS 258
+ + + F P D +++ +I C E + +S+L+ MYS
Sbjct: 274 NMMKMAGFRP--DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYS 331
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
C L + K+F + + G+V W+SMI+ Y + + EAI L + + + +
Sbjct: 332 RCGCLEYSLKVFLECEN------GDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAN 385
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNV 372
TF S L AC S L+ G+ Y V L +DL R G+V
Sbjct: 386 DVTFLSLLYAC-------SHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSV 438
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA-----------------YLLFRDMI 414
+ A L +P K DV+ W L+ C H +A Y+L ++
Sbjct: 439 EEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIH 498
Query: 415 NSNQ------DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
S++ DV + + LK ++ L Q+H FC+ + + + S YL
Sbjct: 499 ASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIAS----YL 554
Query: 469 KCGEIDDGLALFKFMPERDVV 489
+ E+ + ++P+ D V
Sbjct: 555 R--ELTSEMKKRGYVPDIDSV 573
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V + C + ++ QG+ +H +IK G S + ++L+SMY+ L + K+F E
Sbjct: 289 VSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECEN 348
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-- 124
++V W++M+ AY + R AI L+N M E +E N + ++L ACS G + G
Sbjct: 349 GDVVCWSSMIAAYGFHGRGVEAIDLFNQM-EQEKLEANDVTFLSLLYACSHCGLKEKGIK 407
Query: 125 ---RLIHERITREKLEYDTVLMNTL 146
++ + + +LE+ T +++ L
Sbjct: 408 FFDLMVEKYGVKPRLEHYTCMVDLL 432
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 284/554 (51%), Gaps = 73/554 (13%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+S + GG Q+H +K GF + + +LIDMY KCGE+ +F MPER+VVSWT +
Sbjct: 17 SSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTAL 76
Query: 239 IVGCF------EC---------------SCFTLSA------------------------- 252
+VG EC + FTLSA
Sbjct: 77 MVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAG 136
Query: 253 ----------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
LV +YS + +AR++FD + + N+ WN+MISGY +
Sbjct: 137 FEGHHVVANSLVLLYSKGGRIGDARRVFD------GTVFRNLVTWNAMISGYAHAGHGRD 190
Query: 303 AITLLSHIHS-----SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--D 355
++ + + D +TF S LKAC +L +R QVH +V G +
Sbjct: 191 SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSL--GAAREGAQVHAAMVIRGVSTASN 248
Query: 356 YIVGSNLIDLYARLGNV-KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
I+ L+D+Y + + A+++F+RL +K+ + W+ +I+G + G A LF
Sbjct: 249 AILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFW 308
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+S + ++SSV+ V + A + +G+QVH + VK + SLIDMY KCG D
Sbjct: 309 SSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTD 368
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ F+ +P R+VVSWT +I G G++G +EAI F+EM ++P+E+ +L +LSAC
Sbjct: 369 EAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACS 428
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H+GLVEE F++++ + L P EHY CMVDLLG+AG +A+ L+A MP P +W
Sbjct: 429 HSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVW 488
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H N + E LLA ++P YVMLSN++A G W +VR A ++
Sbjct: 489 QTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRR 548
Query: 655 G-EKKAGMSWIEVS 667
G K+ G SW+EV
Sbjct: 549 GLRKQGGCSWVEVG 562
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 227/523 (43%), Gaps = 53/523 (10%)
Query: 1 MDLRR-IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
M+ R+ I + LR +I G LH ++K G D GNNL+ MYA L A +
Sbjct: 1 MERRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGE 60
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+F M +N+VSWT ++ + + +RL M V PN F SA LKAC + G
Sbjct: 61 VFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVG 120
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+ G IH R E V+ N+L+ +Y K G + R++FD + + N+
Sbjct: 121 DMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFD------GTVFRNLVT 174
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKED-----VTLTSLIDMYLKCGEIDDGLAL 223
WN+M+SG G + V +R E+ED T SL+ G +G +
Sbjct: 175 WNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQV 234
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE-ARKLFDQYSSWAASAYG 282
M R V + + I+ AL+DMY C L A ++F++
Sbjct: 235 HAAMVIRGVSTASNAILA---------GALLDMYVKCRCLLPMAMQVFNRLEQ------K 279
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL- 341
N W ++I G+ Q +EA+ L SSG+ D + +S ++ + FAL
Sbjct: 280 NAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSS-------VVGVFADFALV 332
Query: 342 ----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
QVH V + LD V ++LID+Y + G A F +P ++VV+W+ +I G
Sbjct: 333 EQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGL 392
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKE 456
KHG A +F +M + ++ ++L CS + ++ A R
Sbjct: 393 GKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPR 452
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGC 498
++D+ + GE+ + L MP V W ++ C
Sbjct: 453 AEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSAC 495
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 199/715 (27%), Positives = 324/715 (45%), Gaps = 145/715 (20%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ AL+ C + +S+ GK +H +I+ GL I GN L++MY SL A ++FD M
Sbjct: 10 ITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGMDH 69
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++++SW ++TAY A+ L+ M E G +EP+ + AV+ AC L+ G
Sbjct: 70 RDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDK 129
Query: 127 IHERI-TREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
I + R L+ D VL N L++MY KCGSL +F++ +V WN+++S
Sbjct: 130 IFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMK------IRDVVSWNAIIS 183
Query: 184 G---------------------------------------------------GKQVHAFC 192
G+++HA
Sbjct: 184 ALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALV 243
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
++RG E E V +L+ MY CG + D L F M +R+VVSW +I
Sbjct: 244 IERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAY---------- 293
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
++ NC ++EA + +
Sbjct: 294 ---VHHNC---------------------------------------DKEAFRIFHQMQL 311
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ +S TF + L AC F LQ+H ++ SG E D VG+ ++ ++A+ ++
Sbjct: 312 EGVQPNSVTFVTFLSACSTPAAFED--GLQLHSIVRESGLEADASVGNAVVHMFAKCWSL 369
Query: 373 KSALELFHRLPKKDVVAWSGL------------------------------IMGC-TKHG 401
AL F R+P+K++ +W+GL I+G +
Sbjct: 370 DDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVERE 429
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
+ A LFR MI N +++L C+ A L G+++H +RG + E
Sbjct: 430 MAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGN 489
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DM+ KC + F+ + +D SW ++ QNG A+EA+ F +M + +KP
Sbjct: 490 ALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKP 549
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
++TF+ V AC HAG +E+A TIF S++ +YG+ P HY M DLLG+AG D+AE++
Sbjct: 550 TDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEV 609
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
I +PF D+ W ++L AC+ H + + +A Q+L +P D + V LSN++A
Sbjct: 610 IKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAARVALSNIFA 664
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/581 (24%), Positives = 244/581 (41%), Gaps = 78/581 (13%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKL 160
P+ + LK+C L G+ IH + L + N L++MY KCGSL R++
Sbjct: 4 PDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREV 63
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQV----------HAFCVKRGFEKEDVTLTSLIDM 210
FD + +V WN++++ Q A E + VT +++
Sbjct: 64 FDGMD------HRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSA 117
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
++ G +F + ER ++ + +++G +ALV+MYS C L A +F
Sbjct: 118 CCDPSALEAGDKIFALVEERGLLD-SDVVLG---------NALVNMYSKCGSLKSATMVF 167
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI-------DSYTFT 323
++ +V WN++IS +++ + A+ + G+ D +T
Sbjct: 168 ERMK------IRDVVSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLA 221
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
SAL AC ++H L++ G E + +VG+ L+ +YA G ++ ALE F ++
Sbjct: 222 SALAACTGPEMLEE--GREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMA 279
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+++VV+W+ +I H + A+ +F M N + L CS A+ G Q
Sbjct: 280 QRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQ 339
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA------------------------- 478
+H+ + G E + +++ M+ KC +DD LA
Sbjct: 340 LHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGR 399
Query: 479 ------LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
LF+ M ERDV++W I+ + AKEA+ F+ MI K N IT+ +L A
Sbjct: 400 LAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGA 459
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C L+ E I + E G + L +VD+ G+ A Q + K D +
Sbjct: 460 CAGEALLAEGRRIH-ELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGK-DAS 517
Query: 593 IWASMLKACETHNNTK--LVSIIAEQLLATSPEDPSKYVML 631
W ++ A + + + L + Q P D + V+
Sbjct: 518 SWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVF 558
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 184/435 (42%), Gaps = 60/435 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ AL C +++G+ +H +I+ G ++ GN L+SMYA+ +L DA + F +MA
Sbjct: 220 LASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMA 279
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++N+VSW M+ AY + A R++ H ++ V+PN + L ACS + G
Sbjct: 280 QRNVVSWNAMIAAYVHHNCDKEAFRIF-HQMQLEGVQPNSVTFVTFLSACSTPAAFEDGL 338
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + LE D + N ++ M+ KC SL D + + N+ WN +L
Sbjct: 339 QLHSIVRESGLEADASVGNAVVHMFAKCWSLD----DALAAFQRIPQKNLGSWNGLLGAY 394
Query: 186 KQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSWT 236
V R E++ +T ++ Y++ + + LF M + + ++WT
Sbjct: 395 IHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWT 454
Query: 237 GIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
++ C + F +ALVDM+ C L AR+ F++
Sbjct: 455 TMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGK 514
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LL 333
AS+ WN +++ N EEA+ + G+ TF AC + L
Sbjct: 515 DASS------WNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLE 568
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
+ FA H DY + S + DL R G + A E+ R+P +D
Sbjct: 569 QAKTIFASLRH----------DYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQD 618
Query: 387 VVAWSGLIMGCTKHG 401
+ W L+ C HG
Sbjct: 619 ELPWMTLLSACKVHG 633
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 162/353 (45%), Gaps = 20/353 (5%)
Query: 314 GMCIDSYTFTSALKACINLLNFNS-RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D+ +F +ALK+C+ + + + +F +H L++ SG VG+ L+++Y + G++
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKF---IHLLVIESGLLTQISVGNALVNMYGKCGSL 57
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKV 431
A E+F + +DV++W+ +I + G A LF+ M + + + +V+
Sbjct: 58 ALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSA 117
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C ++L G ++ A +RG D+ L +L++MY KCG + +F+ M RDVVS
Sbjct: 118 CCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVS 177
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE-------ITFLGVLSACRHAGLVEEAW 543
W II ++ R A+ F+EM L P E T L+AC ++EE
Sbjct: 178 WNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGR 237
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
I ++ E G E L +V + G DA + +M + + W +M+ A
Sbjct: 238 EIH-ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMA-QRNVVSWNAMIAAYVH 295
Query: 604 HNNTKLVSIIAE--QLLATSPEDPSKYVMLSNVYATLGMWDSL---SKVRKAG 651
HN K I QL P + LS D L S VR++G
Sbjct: 296 HNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESG 348
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 203/760 (26%), Positives = 353/760 (46%), Gaps = 121/760 (15%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KNI 69
R ++ + + +H +I GL F L+ Y+ F + + +F ++ KN+
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W +++ A++ N A+ Y + E V P+ + + +V+KAC+ D ++G L+++
Sbjct: 72 YIWNSIIRAFSKNGWFPKALEFYGKLRE-SKVSPDKYTFPSVIKACAGLFDAEMGDLVYK 130
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+I E D + N L+DMY + G L+ R++FD+ ++ WNS++SG
Sbjct: 131 QILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEM------PVRDLVSWNSLISGYSS 184
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+ +H F +K G V
Sbjct: 185 HGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVV 244
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------- 244
L+ MYLK D +F+ M RD V++ +I G +
Sbjct: 245 NNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK 304
Query: 245 ----------CSC--------------------FTLSA-----LVDMYSNCNVLCEARKL 269
C+C F L + L+D+Y+ C + AR +
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F+ + WNS+ISGY+ + EA+ L + D T+ +
Sbjct: 365 FNSMEC------KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + +F +H + SG +D V + LID+YA+ G V +L++F+ + D V
Sbjct: 419 TRLADL--KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT 476
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSN--QDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
W+ +I C + G + + M + D+ F+++ L +C+ LA+ R GK++H
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVT--LPMCASLAAKRLGKEIHCC 534
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
++ G+E E +LI+MY KCG ++ +F+ M RDVV+WTG+I G G ++A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F +M +S + P+ + F+ ++ AC H+GLVE+ F MK Y ++P +EHY C+VD
Sbjct: 595 LESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LL ++ AE+ I MP +PD +IWAS+L+AC T + + ++ +++ +P+DP
Sbjct: 655 LLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
++ SN YA L WD +S +RK+ + K +K G SWIE+
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEI 754
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 178/471 (37%), Gaps = 119/471 (25%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + L CG R + K ++ +++ G + N L+ +YA + A +F
Sbjct: 306 DILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVF 365
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M K+ VSW ++++ Y + A++L+ M+ + + Y ++ + DL
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISLSTRLADL 424
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
G+ +H + + D + N L+DMY KCG + + K+F+ + WN
Sbjct: 425 KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTL------DTVTWN 478
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+++S GK++H ++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G+E E +LI+MY KCG ++ +F M RDVV+WTG+I
Sbjct: 539 GYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMI---------------- 582
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+A YG + E+A+ + SG+
Sbjct: 583 --------------------YAYGMYG----------------EGEKALESFVDMEKSGI 606
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLI----VTSGYELDYIVG--SNLIDLYARL 369
DS F + + AC S L GL + + Y++D ++ + ++DL +R
Sbjct: 607 VPDSVVFIALIYAC-------SHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ A E +P + D W+ ++ C G A + R +I N D
Sbjct: 660 QKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
V+ IS L S L LRR +HA + G + D LID Y L++
Sbjct: 5 VSSAFISRALSSSSNLNELRR---IHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSV 61
Query: 480 FKFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F+ + P ++V W II +NG +A+ ++ ++ +S++ P++ TF V+ AC AGL
Sbjct: 62 FRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGL 119
Query: 539 VE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+ E + E G E L +VD+ + G A Q+ EMP + D W S+
Sbjct: 120 FDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSL 178
Query: 598 LKACETH 604
+ +H
Sbjct: 179 ISGYSSH 185
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 319/612 (52%), Gaps = 26/612 (4%)
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FDEM +N VS+ T++ Y + + A L+ + G E N F+++ VLK
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGH-ELNPFVFTTVLKLLVSME 60
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYV--KCGSLTRKLFDQYSNWAASAYGNVAL 177
+LGR++H + + +T + L+D Y C S+ R++FD+ S+ ++
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS------KDMVS 114
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
W M++ + F F + + + G + L L NF + V
Sbjct: 115 WTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTV--HCS 172
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA---SAYGNVALWNSMISGY 294
++ +E + L+++Y+ C D +W A +V W+ MIS +
Sbjct: 173 VLKTNYERDLYVGVGLLELYTRCG---------DNDDAWRAFGDMPKNDVIPWSFMISRF 223
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+ Q+E+A+ + + + + + +TF+S L+A ++ + + + +HG + +G
Sbjct: 224 AQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLD--LSKTIHGHALKAGLST 281
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V + L+ YA+ G ++ ++ELF L ++ V+W+ +I+ + G A LF +M+
Sbjct: 282 DVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNML 341
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ SS+L+ C+ LA+L G QVH K + ++ +LIDMY KCG I
Sbjct: 342 RYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIK 401
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F + RD VSW II G +G EAI F M +++ KP+E+TF+GVLSAC
Sbjct: 402 DARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACS 461
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+ G ++E FTSMK +YG+EP +EHY CMV L+G++G D A + I ++PF+P IW
Sbjct: 462 NTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIW 521
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC HN+ +L I A+++L P D + +V+LSN+YA W +++ VRK K+
Sbjct: 522 RALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRK 581
Query: 655 GEKK-AGMSWIE 665
G KK G+SWIE
Sbjct: 582 GVKKEPGLSWIE 593
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 189/481 (39%), Gaps = 116/481 (24%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++K G + F G L+ Y+ ++ A ++FDE++ K++VSWT M+ +Y
Sbjct: 65 GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE 124
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + A+ ++ M G +PN F ++ VLKAC + D G+ +H + + E D
Sbjct: 125 NDCFSEALEFFSQMRVAG-FKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLY 183
Query: 142 LMNTLLDMYVKCG---SLTRKLFDQYSN-----------WAASAYGNVAL---------- 177
+ LL++Y +CG R D N +A S AL
Sbjct: 184 VGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAF 243
Query: 178 -------WNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
++S+L K +H +K G + +L+ Y KCG I+ +
Sbjct: 244 VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSM 303
Query: 222 ALFNFMPERDVVSWTGIIVGCFEC------------------------------SCFTLS 251
LF + +R+ VSW IIV + +C TL+
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 252 -------------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
AL+DMY+ C + +AR +FD +
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLD------LRDKVS 417
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN++I GY ++ EAI + + + + D TF L AC N + G
Sbjct: 418 WNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLD-------EGK 470
Query: 347 IVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTK 399
+ + DY + + ++ L R GN+ A++ +P + V+ W L+ C
Sbjct: 471 QYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVI 530
Query: 400 H 400
H
Sbjct: 531 H 531
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ GK++HC ++K +D++ G LL +Y +DA + F +M + ++
Sbjct: 154 LKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDV 213
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ W+ M++ + + + A+ ++ M V PN F +S+VL+A + LDL + IH
Sbjct: 214 IPWSFMISRFAQSGQSEKALEIFCQM-RRAFVIPNQFTFSSVLQASADIESLDLSKTIHG 272
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----W--------------- 167
+ L D + N L+ Y KCG + + +LF+ S+ W
Sbjct: 273 HALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGER 332
Query: 168 AASAYGNV---------ALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLID 209
A S + N+ ++S+L G QVH K + ++ +LID
Sbjct: 333 ALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALID 392
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
MY KCG I D +F+ + RD VSW II G
Sbjct: 393 MYAKCGSIKDARFMFDMLDLRDKVSWNAIICG 424
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ K++H +K GLS D+F N L++ YA + + +LF+ ++ +N VSW T++
Sbjct: 263 SLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIV 322
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+Y A+ L+++ML Y V+ YS++L+AC+ L+LG +H +
Sbjct: 323 SYVQLGDGERALSLFSNMLRY-QVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYG 381
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
D + N L+DMY KCGS+ R +FD + WN+++ G G V A
Sbjct: 382 QDVAVGNALIDMYAKCGSIKDARFMFDMLD------LRDKVSWNAIICGYSMHGLGVEAI 435
Query: 192 CV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+ + + +++T ++ G +D+G F M +
Sbjct: 436 KMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C +++ G +HC K QD+ GN L+ MYA S+ DA +FD + ++
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW ++ Y+ + AI+++N M E +P+ + VL ACS +G LD G+
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKE-TKCKPDELTFVGVLSACSNTGRLDEGK 470
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 338/637 (53%), Gaps = 39/637 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIK-YGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
AL C ++QG+ +H R+++ ++ D+ N+L++MYA S+ + K+FD M RK
Sbjct: 118 ALAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRK 177
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VSW M++A+ P A+ LY H ++ +EPNGF+++++L AC+ G+L LG I
Sbjct: 178 NLVSWNAMISAFVQCDYPEQALELY-HRMKRERLEPNGFVFASLLTACASLGNLQLGSSI 236
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H+RIT L+ D V+ N L++MY KCG + L ++ A +V W SM++G Q
Sbjct: 237 HQRITSLGLQRDIVMENALINMYSKCGCMDEAL----EVFSGLATRDVFTWTSMIAGYAQ 292
Query: 188 V----HAFCVKRGFEKEDVTLTS--LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ AF ++ V+ TS + + C ++ G L + V G
Sbjct: 293 LGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLEQGKHL------HEEVKAFG---- 342
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
FE +AL+ MYS C L +A LF A + W++M++ +
Sbjct: 343 -FESITVVETALMFMYSRCGSLEDAEFLF------AKMQQKDYVSWSAMVTSHAQFGDPG 395
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A+TL + GM + TF SAL+AC L +SR + + LI SG + + ++
Sbjct: 396 KALTLFRQMILEGMQLSLPTFCSALQACS--LKRDSRLSKTIRELIDWSGIDKMDSIRAD 453
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ Y++ G+++ A ++F R+ +DV+ W+ +I G + G + A LF M + +
Sbjct: 454 LVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPD 513
Query: 422 QFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
SSVL+ CS +L G++VHA +G + D LI+MY +CG + D +F
Sbjct: 514 SVTFSSVLQACS---NLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIF 570
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ M +SW+ I+ C ++G+ + I ++ M+ + P+ +T + +L++C HAGL +
Sbjct: 571 ESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTD 630
Query: 541 EAWTIFTSMKPEYGLEPHL-EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
EA FT + ++ L PHL EHY CMVDLL +AG D+AE+LI+ M +PD +ML
Sbjct: 631 EACHYFTWIISDFEL-PHLDEHYQCMVDLLCRAGRLDEAEELIS-MIDRPDVVTLNTMLA 688
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
AC+ + + A Q+ +T + +V+LS +YA
Sbjct: 689 ACKNQQDLHRGARTAAQMQSTE-SCAAPFVLLSQIYA 724
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 243/598 (40%), Gaps = 120/598 (20%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y+ +L+ C ++ GR +H+ + R + L ++ MY KCG L + FD+ +
Sbjct: 17 YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76
Query: 166 NWAASAYGNVALWNSMLSG----------------------------------------- 184
+ N +WN M+SG
Sbjct: 77 D------KNDFVWNLMISGYARSGKNREALELFHKMDIPPNGFIFASALAACAGLGDLEQ 130
Query: 185 GKQVHAFCVK-RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
G+++H ++ R + V SL+ MY +CG + +G+ +F+ MP +++VSW +I
Sbjct: 131 GREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFV 190
Query: 244 EC------------------------------SCFTL----------------------- 250
+C +C +L
Sbjct: 191 QCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIV 250
Query: 251 --SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+AL++MYS C + EA ++F + A +V W SMI+GY EA
Sbjct: 251 MENALINMYSKCGCMDEALEVF------SGLATRDVFTWTSMIAGYAQLGFGSEAFAFYD 304
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ + S TF + L AC L +H + G+E +V + L+ +Y+R
Sbjct: 305 RMRRDCVSPTSATFVALLSACSTLEQ-----GKHLHEEVKAFGFESITVVETALMFMYSR 359
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G+++ A LF ++ +KD V+WS ++ + G A LFR MI ++ S
Sbjct: 360 CGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSA 419
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L+ CS R K + G +K D L+ Y KCG++++ +F M RDV
Sbjct: 420 LQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDV 479
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
++WT +I G Q G +K A+ F M ++P+ +TF VL AC + +E+ +
Sbjct: 480 LTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHAR 536
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ G + ++++ + G DA Q+ M + + W++++ C H
Sbjct: 537 ILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMD-RSSRISWSAIMTLCARHGQ 593
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L AL+ C +R + K++ I G+ + +L+S Y+ + +A K+
Sbjct: 411 LSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKI 470
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +++++WT M+ Y A+ L++ M G VEP+ +S+VL+ACS +
Sbjct: 471 FDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQACS---N 526
Query: 121 LDLGRLIHERI-TREKLEYDTVLMNTLLDMYVKCGSL--TRKLF---DQYSNWAASAYGN 174
L+ GR +H RI + + L N L++MY +CGS+ R++F D+ S + SA
Sbjct: 527 LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMT 586
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + V G + VTL ++++ G D+ F ++
Sbjct: 587 LCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWI 639
>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 312/648 (48%), Gaps = 72/648 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R +K+G+ +H RI G D+ L+ MY F + +A +LFD M+R+ ++W M+
Sbjct: 113 RGLKKGREIHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMI 172
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
TAY N N AI LY + V P+ ++++VL ACS + +L+ G+ IH RI K
Sbjct: 173 TAYGQNGFGNEAIELYKQI----DVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKF 228
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
E DTV+ NTLLD+Y CG L A+++SM G+ V
Sbjct: 229 EIDTVVNNTLLDLYGMCGCLEEAK---------------AVFHSMQEQGRDV-------- 265
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFM-----PERDVVSWTGIIVGC--------- 242
V+ S+I +L + + L LF M P +D VS+ + C
Sbjct: 266 -----VSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMGSDGLV 320
Query: 243 -------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ +ALV MY C + EA+++FD S N W S
Sbjct: 321 HGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPS------KNAVTWTS 374
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI GY N EA+ + + G D + + ++A + + + A ++H +
Sbjct: 375 MIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDV--KMAAKIHSRLSE 432
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD--VVAWSGLIMGCTKHGLNSLAY 407
G+ D + S+LI ++ + G+V++A +F + +K AW+ +I ++ G
Sbjct: 433 LGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVL 492
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF+ M ++ ++ +L V + HA + G E + + T+L++
Sbjct: 493 ELFQAMQAASVRPDRATFLGLLAVGGSFSPSEASAVQHAI-LSTGMETDSLVGTALLNTL 551
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+ G++ + +F + +RDVVSWT ++V +G + EAI FQEM ++P+E+ FL
Sbjct: 552 TRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDEVAFL 611
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VL AC HAG W F SM+ +Y LE +HY C+VDLLG+AG DAE LI MPF
Sbjct: 612 AVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCCVVDLLGRAGRLADAEDLIVSMPF 671
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
KPD+ W++++ AC TH + + + I+ + A E + +V L N +
Sbjct: 672 KPDEATWSALVGACNTHGDVERAARISRAMEA--EERAATHVSLCNTF 717
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 238/550 (43%), Gaps = 69/550 (12%)
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAA 169
L AC L GR +H +TR D VL N L++MY KC S R +FD +
Sbjct: 1 LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMT---- 56
Query: 170 SAYGNVALWNSMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLI---------DMY 211
+ WN+M++ G + V F G + TL S + D
Sbjct: 57 --VRDSVSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRG 114
Query: 212 LKCG-EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
LK G EI + FM DV TG L+ MY + EAR+LF
Sbjct: 115 LKKGREIHRRIQSIGFMS--DVALQTG---------------LIKMYGKFGEVIEARRLF 157
Query: 271 DQYSSWAASAYGNVAL-WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
D S VAL W MI+ Y N EAI L I + D F S L AC
Sbjct: 158 DGMSR-------RVALTWARMITAYGQNGFGNEAIELYKQID---VVPDKVIFASVLDAC 207
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--KDV 387
+ +N ++H IV +E+D +V + L+DLY G ++ A +FH + + +DV
Sbjct: 208 SSAMNLEE--GKRIHARIVEGKFEIDTVVNNTLLDLYGMCGCLEEAKAVFHSMQEQGRDV 265
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINS---NQDVNQFIISSVLKVCSCLAS--LRRGK 442
V+W+ +I + A LF +M + QD ++ S L CS + S L GK
Sbjct: 266 VSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYV--SALDACSAMGSDGLVHGK 323
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+H + + T+L+ MY +CG++ + +F MP ++ V+WT +I G NG
Sbjct: 324 TLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSMIRGYSTNG 383
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
A+EA+ FQ+M Q + ++I ++ V+ A R V+ A I + + E G
Sbjct: 384 FAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDVKMAAKIHSRLS-ELGWCSDSAIQ 442
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATS 621
++ + G+ G + A ++ M K + W +M+ A + + V + + + A S
Sbjct: 443 SSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQAMQAAS 502
Query: 622 PEDPSKYVML 631
P + L
Sbjct: 503 VR-PDRATFL 511
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 308/593 (51%), Gaps = 40/593 (6%)
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
++ + M+E VE + + +L L LG+ +H + L+ + N+L++
Sbjct: 300 LKCFADMVE-SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 149 MYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----KRGF 197
MY K R +FD S ++ WNS+++G G +V A C+ + G
Sbjct: 359 MYCKLRKFGFARTVFDNMSE------RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ + T+TS++ + +GL+L V I + S F +AL+D Y
Sbjct: 413 KPDQYTMTSVLK---AASSLPEGLSL------SKQVHVHAIKINNVSDS-FVSTALIDAY 462
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S + EA LF++++ ++ WN+M++GY + + + L + +H G
Sbjct: 463 SRNRCMKEAEILFERHNF-------DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +T + K C L N QVH + SGY+LD V S ++D+Y + G++ +A
Sbjct: 516 DDFTLATVFKTCGFLFAINQ--GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
F +P D VAW+ +I GC ++G A+ +F M ++F I+++ K SCL +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +G+Q+HA +K + TSL+DMY KCG IDD LFK + ++ +W ++VG
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q+G KE + F++M +KP+++TF+GVLSAC H+GLV EA+ SM +YG++P
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKP 753
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+EHY C+ D LG+AG AE LI M + +++ ++L AC +T+ +A +L
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKL 813
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDS--LSKVRKAGKKLGEKKAGMSWIEVSS 668
L P D S YV+LSN+YA WD L++ G K+ +K G SWIEV +
Sbjct: 814 LELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV-KKDPGFSWIEVKN 865
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 236/572 (41%), Gaps = 97/572 (16%)
Query: 105 GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD 162
GF+ +A+ S DL LG+ H RI + + L+N L+ MY KCGSLT R++FD
Sbjct: 44 GFLRNAIT-----SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD 98
Query: 163 QYSNWAASAYGNVALWNSMLSGGKQ----------------------------------- 187
+ + ++ WNS+L+ Q
Sbjct: 99 KMPD------RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 188 --------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
H + K G + ++ +L+++YLK G++ +G LF MP RDVV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 234 SWTGIIVGCFE----------CSCFTLSALVDMYSNCNVLCEARKLFD-----QYSSWA- 277
W ++ E S F S L +L AR D Q S+A
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL--ARISGDDSDAGQVKSFAN 270
Query: 278 ---ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
AS+ + N +S Y+ + Q + + + S + D TF L + + +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
QVH + + G +L V ++LI++Y +L A +F + ++D+++W+ +I
Sbjct: 331 L--ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGF 453
G ++GL A LF ++ +Q+ ++SVLK S L L KQVH +K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAY 510
+ T+LID Y + + + LF ER D+V+W ++ G Q+ + +
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLL 569
F M + + ++ T V C + + + ++K Y L+ + ++D+
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMY 562
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ G A+ +P PD W +M+ C
Sbjct: 563 VKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 202/518 (38%), Gaps = 139/518 (26%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ G+ +HC +K GL + N+L++MY A +FD M+ ++++SW +++
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
N A+ L+ +L G ++P+ + ++VLKA SL L L + +H +
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 137 EYDTVLMNTLLDMYV--KCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
D+ + L+D Y +C LF++++ ++ WN+M++G
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFERHN-------FDLVAWNAMMAGYTQSHDGHKT 501
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
GKQVHA+ +K G++ + + ++DM
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------------------- 244
Y+KCG++ F+ +P D V+WT +I GC E
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 245 ------CSCFTL-----------------------SALVDMYSNCNVLCEARKLFDQYSS 275
SC T ++LVDMY+ C + +A LF +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LL 333
N+ WN+M+ G + + +E + L + S G+ D TF L AC + L+
Sbjct: 682 M------NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ + +HG G + + S L D R G VK A L + + +
Sbjct: 736 SEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
Query: 393 LIMGCTKHG-----------------LNSLAYLLFRDM 413
L+ C G L+S AY+L +M
Sbjct: 793 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ + CG +I QGK +H IK G D++ + +L MY ++ A FD +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V+WTTM++ N A +++ M G V P+ F + + KA S L+ GR
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGR 638
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + D + +L+DMY KCGS+ D Y + N+ WN+ML G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSID----DAYCLFKRIEMMNITAWNAMLVGL 694
Query: 186 KQ 187
Q
Sbjct: 695 AQ 696
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 332/659 (50%), Gaps = 40/659 (6%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
KS H +II LS D F L+ Y+D SL A +FD+ + + M+ Y +
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
R + L+ ++ ++E + + LKAC+ S D ++G I + +E + +
Sbjct: 109 GRYRETLELFG-LMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFV 167
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK------ 194
++++ VK G + +++FD N +V WNS++ G Q F V
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMPN------KDVVCWNSIIGGYVQAGCFDVAFQLFFE 221
Query: 195 ---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
G + +T+TSLI G + G + ++ G+ +G L+
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYV--------LGLGLGN---DILVLT 270
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+ VDMYS + AR +F + + N+ WN+MISG V N E+ L +
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTR------NLVSWNAMISGCVRNGLVGESFDLFHRLV 324
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S D T S L+ C + + L HG + S +E + I+ + ++DLY++ G+
Sbjct: 325 RSSGGFDLTTIVSLLQGCSQTASLATGKIL--HGCAIRS-FESNLILSTAIVDLYSKCGS 381
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+K A +F+R+ ++V+ W+ +++G ++G A LF M N S++
Sbjct: 382 LKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHS 441
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
C+ L SL+RG+ +H + GF + + +T+L+DMY KCG+I+ +F +DVV
Sbjct: 442 CAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVL 501
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G G +G +A+ + +MI+ LKPN+ TFL +LSAC H+ LVE+ ++F SM+
Sbjct: 502 WNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSME 561
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++ + P +HY C+VDLL +AG F++A+ LI +MPF+P + ++L C TH N L
Sbjct: 562 RDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLG 621
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
+++LLA +P Y+MLSN+YA WD + +R + G KK G S +E +
Sbjct: 622 IQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 214/514 (41%), Gaps = 121/514 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + G + ++ G+ ++ F G++++S F + +A ++FD M K+
Sbjct: 136 ALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKD 195
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V W +++ Y + A +L+ M G ++P+ +++++AC G+L LG+ +H
Sbjct: 196 VVCWNSIIGGYVQAGCFDVAFQLFFEMHGSG-IKPSPITMTSLIQACGGIGNLKLGKCMH 254
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL-----------TRKL----------------- 160
+ L D +++ + +DMY K G + TR L
Sbjct: 255 GYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVG 314
Query: 161 --FDQYSNWAASAYG-NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
FD + S+ G ++ S+L G GK +H C R FE + T+++
Sbjct: 315 ESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHG-CAIRSFESNLILSTAIV 373
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC----------------------- 245
D+Y KCG + +FN M +R+V++WT ++VG +
Sbjct: 374 DLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSV 433
Query: 246 -------SCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQY 273
SC L +L VDMY+ C + A ++F
Sbjct: 434 TFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSH- 492
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
S +V LWNSMI+GY ++ +A+ + + G+ + TF S L AC
Sbjct: 493 ----GSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS--- 545
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
+SR Q G+ + + E D+ + + L+DL +R G + A L ++P +
Sbjct: 546 --HSRLVEQ--GISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPG 601
Query: 387 VVAWSGLIMGCTKH-----GLNSLAYLLFRDMIN 415
L+ GC H G+ + LL D +N
Sbjct: 602 TAVLEALLSGCRTHKNINLGIQTSDKLLALDAMN 635
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA- 65
V + C S+K+G+S+H + + G + DI L+ MYA +N A ++F +
Sbjct: 436 VSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++V W +M+T Y + A+ +Y+ M+E G ++PN + ++L ACS S ++ G
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEG-LKPNQTTFLSLLSACSHSRLVEQGI 554
Query: 126 LIHERITRE 134
+ + R+
Sbjct: 555 SLFNSMERD 563
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 215/718 (29%), Positives = 345/718 (48%), Gaps = 83/718 (11%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-- 64
+ AL+ C S+ K LH + I GL + T NL+ Y S A L + +
Sbjct: 165 ITALKECN---SLAHAKLLHQQSIMQGLLFHLAT--NLIGTYIASNSTAYAILLLERLPP 219
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ ++ W ++ P LY M G P+ + + V KAC+ L LG
Sbjct: 220 SPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT-PDHYTFPFVFKACANLSSLSLG 278
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN---------------- 166
+H ++R + + N ++ MY KCG+L +FD +
Sbjct: 279 ASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAY 338
Query: 167 -WAASAYGNVALWNSMLSG-------------------------GKQVHAFCVKRGFEKE 200
WA+ A +AL++ M + G+QVH F ++ G +
Sbjct: 339 MWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDD 398
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+++DMY KCG++++ +F M +DVVSW ++ G YS
Sbjct: 399 VFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTG---------------YSQA 443
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
L A LF++ + + +V W ++I+GY Q EA+ + + G +
Sbjct: 444 GRLEHALSLFERMTE--ENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVV 501
Query: 321 TFTSALKACIN---LLNFNSRFALQVHGLIVTSGYEL---DYIVGSNLIDLYARLGNVKS 374
T S L AC++ LL+ + ++ G + D V + LID+YA+ + +
Sbjct: 502 TLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEV 561
Query: 375 ALELFHRL-PK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLK 430
A ++F + PK +DVV W+ +I G +HG + A LF M ++ + N F +S L
Sbjct: 562 ARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALV 621
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTS--LIDMYLKCGEIDDGLALFKFMPERDV 488
C+ LA+LR G+QVHA+ V R F + + LIDMY K G++D +F MP+R+
Sbjct: 622 ACARLAALRFGRQVHAY-VLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNA 680
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
VSWT ++ G G +GR ++A+ F EM + L P+ ITFL VL AC H+G+V+ F
Sbjct: 681 VSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNR 740
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M ++G++P EHY CMVDL G+AG +A +LI EMP +P +W ++L AC H+N +
Sbjct: 741 MSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVE 800
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
L A +LL + Y +LSN+YA W ++++R K+ G +K+ G SWI+
Sbjct: 801 LGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQ 858
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 24/362 (6%)
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC--E 265
I M L+C I L F R + T I EC+ + L+ S L
Sbjct: 134 ISMLLRCFPIKSKLLQSQFTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLFHL 193
Query: 266 ARKLFDQYSSWAASAYG------------NVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
A L Y + ++AY +V WN +I + + TL + S
Sbjct: 194 ATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSL 253
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G D YTF KAC NL + + +H + SG+ + V + ++ +Y + G ++
Sbjct: 254 GWTPDHYTFPFVFKACANLSSLSL--GASLHATVSRSGFASNVFVCNAVVSMYGKCGALR 311
Query: 374 SALELFHRLPKK---DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN---QDVNQFIISS 427
A +F L + D+V+W+ ++ + A LF M + DV + +
Sbjct: 312 HAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLV--N 369
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C+ LA+ RG+QVH F ++ G + +++DMY KCG++++ +F+ M +D
Sbjct: 370 ILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKD 429
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VVSW ++ G Q GR + A++ F+ M + ++ + +T+ V++ G EA +F
Sbjct: 430 VVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFR 489
Query: 548 SM 549
M
Sbjct: 490 QM 491
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 176/498 (35%), Gaps = 163/498 (32%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + +G+ +H I+ GL D+F GN ++ MYA + +A+K+F
Sbjct: 363 DVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVF 422
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG---------------------- 99
M K++VSW MVT Y+ R A+ L+ M E
Sbjct: 423 QRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGC 482
Query: 100 ------------SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV------ 141
PN ++L AC G L G+ H + L D
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542
Query: 142 --LMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
++N L+DMY KC S + RK+FD S +V W M+ G
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVS----PKDRDVVTWTVMIGGYAQHGDANNALQL 598
Query: 185 ---------------------------------GKQVHAFCVKRGFEKEDVTLTS--LID 209
G+QVHA+ V R F + + LID
Sbjct: 599 FSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAY-VLRNFYGSVMLFVANCLID 657
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY K G++D +F+ MP+R+ VSWT ++ G
Sbjct: 658 MYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTG---------------------------- 689
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
Y ++ + E+A+ + + + D TF L AC
Sbjct: 690 ------------------------YGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYAC 725
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP 383
S + HG+ + D+ V ++DL+ R G + A++L + +P
Sbjct: 726 -------SHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMP 778
Query: 384 KKDV-VAWSGLIMGCTKH 400
+ V W L+ C H
Sbjct: 779 MEPTPVVWVALLSACRLH 796
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/691 (28%), Positives = 348/691 (50%), Gaps = 60/691 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-------------DFTSLND 56
L+ C Q RS+K GK+LHC +++ N+LL+MY+ DF + +
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
++FD M ++N+V+W TM++ Y +R A +++ M+ G + P + V A
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVW 229
Query: 117 LSGDLDLGRLIHERITREKLEY--DTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAY 172
D D +++ + + ++ D ++++ + MY + C R++FD
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFD------CCLE 283
Query: 173 GNVALWNSMLSGGKQ----VHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
N +WN+M+ G Q + A + F +DVT S + + ++ G
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
L ++ + + I L+A++ MYS C + + K+F
Sbjct: 344 LHAYILKSSTILQVVI-----------LNAIIVMYSRCGSIGTSFKVFSNMLE------R 386
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+V WN+M+S +V N ++E + L+ + G +DS T T+ L NL + Q
Sbjct: 387 DVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRS--QEIGKQ 444
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSGLIMGCTKH 400
H ++ G + + + S LID+YA+ G + +A +LF + +D W+ +I G T++
Sbjct: 445 AHAYLIRHGIQFEGM-DSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQN 503
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
GL+ + +FR MI N N ++S+L C+ + ++ GKQ+H F ++ +
Sbjct: 504 GLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVG 563
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
T+L+DMY K G I +F E++ V++T +I GQ+G + A++ F M+ S +K
Sbjct: 564 TALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIK 623
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+ +TF+ +LSAC +AGLV+E IF SM+ EY ++P EHY C+ D+LG+ G +A +
Sbjct: 624 PDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYE 683
Query: 581 LIAEMPFKPDK-TIWASMLKACETHNNTKLVSIIAEQLLATSPEDP--SKYVMLSNVYAT 637
+ + + + IW S+L AC H +L ++A +LL +V+LSN+YA
Sbjct: 684 FVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAA 743
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
G WD++ +VRK ++ G K+AG SW+EV+
Sbjct: 744 EGNWDNVDRVRKEMRQKGLMKEAGCSWVEVA 774
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 160/607 (26%), Positives = 264/607 (43%), Gaps = 84/607 (13%)
Query: 55 NDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
+ A LFD + R V W T++ + N P A+ Y M S + + + +S+ LKA
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS---------------LTRK 159
C+ + L LG+ +H + R ++ N+LL+MY C + L R+
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 160 LFDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCVKR-----GFEKEDVTLTSLIDM 210
+FD NV WN+M+S + + AF + R G V+ ++
Sbjct: 174 VFDTMRK------RNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ + D+ L+ VV V F F +S+ + MY+ + AR++F
Sbjct: 228 VWRMSDYDNANVLYGL-----VVKLGSDFVDDF----FVVSSAIFMYAELGCVDFAREIF 278
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKAC 329
D N +WN+MI GYV N EAI L + S +D TF SAL A
Sbjct: 279 D------CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAI 332
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L Q+H I+ S L ++ + +I +Y+R G++ ++ ++F + ++DVV
Sbjct: 333 SQLQWL--ELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVT 390
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ ++GL+ +L M V+ ++++L + S L S GKQ HA+ +
Sbjct: 391 WNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI 450
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCGQNGRAKEA 507
+ G + E + + LIDMY K G I LF+ +RD +W +I G QNG ++E
Sbjct: 451 RHGIQFEGMD-SYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEG 509
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF---------------TSMKPE 552
A F++MI+ ++PN +T +L AC G + I T++
Sbjct: 510 FAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDM 569
Query: 553 YG---------------LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM---PFKPDKTIW 594
Y LE + Y M+ GQ G + A L M KPD +
Sbjct: 570 YSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTF 629
Query: 595 ASMLKAC 601
++L AC
Sbjct: 630 VAILSAC 636
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 188/426 (44%), Gaps = 61/426 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + AL Q + ++ G+ LH I+K + N ++ MY+ S+ + K+
Sbjct: 320 LDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLS 118
F M +++V+W TMV+A+ N + + L M + GFM +V SL+
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAM------QKQGFMVDSVTLTALLSLA 433
Query: 119 GDL---DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYG 173
+L ++G+ H + R ++++ + + L+DMY K G +T ++LF++ S++
Sbjct: 434 SNLRSQEIGKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLFEKNSDYDR---- 488
Query: 174 NVALWNSMLSG----GKQVHAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALF 224
+ A WN+M++G G F V R +++ VTL S++ G I G +
Sbjct: 489 DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 225 NFMPERDVVSWTGIIVGCF-ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F + CF + F +AL+DMYS + A +F A + N
Sbjct: 549 GFA------------IRCFLNRNVFVGTALLDMYSKSGAITYAENVF------AETLEKN 590
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ +MIS Y + E A++L + SG+ DS TF + L AC S L
Sbjct: 591 SVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC-------SYAGLVD 643
Query: 344 HGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVV--AWSGLIM 395
GL + E +Y + + + D+ R+G V A E L ++ W L+
Sbjct: 644 EGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLG 703
Query: 396 GCTKHG 401
C HG
Sbjct: 704 ACRIHG 709
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS-NQDVNQFIIS 426
R G+ AL LF +P+ V W+ +I+G + + A L + M S + + + S
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC-------------GEI 473
S LK C+ SL+ GK +H ++ F I SL++MY C
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
D +F M +R+VV+W +I + R EA F+ M++ ++P ++F+ V A
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 127/334 (38%), Gaps = 69/334 (20%)
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G L LF+ +P V W II+G F C+ + AL LF Y+
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIG-FICNNMPIDAL---------------LF--YA 92
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
AS DSYTF+S LKAC +
Sbjct: 93 RMRASPSPK---------------------------------FDSYTFSSTLKACAQARS 119
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR-------------LGNVKSALELFHR 381
AL H ++ S + IV ++L+++Y+ N +F
Sbjct: 120 LKLGKALHCH--VLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ K++VVAW+ +I K A+ +FR M+ +V ++
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNA 237
Query: 442 KQVHAFCVKRG--FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
++ VK G F + ++S I MY + G +D +F ER+ W +I G
Sbjct: 238 NVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYV 297
Query: 500 QNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSA 532
QN EAI F ++++S + +++TFL L+A
Sbjct: 298 QNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTA 331
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 263/493 (53%), Gaps = 29/493 (5%)
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-CFECSCFTLSA 252
++GF + SLIDMY KC E+D+ + +F +P +VSW +I G E SC
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 253 LVDM------------YSNCNVLC-------EARKLFDQYSSWAASAYGNVALWNSMISG 293
++ + YSN C AR +FD+ S +V WN+++SG
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISR------PSVTTWNTLLSG 114
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y EQ+++ I L + + D T L +C L + F QVH V
Sbjct: 115 YCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILD--FGRQVHSASVRFLLH 172
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D V S L+D+Y++ G + A +F+++ ++DVV W+ +I G T H LN A+ F+ M
Sbjct: 173 NDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQM 232
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + +S++ CS L+S+ G+Q+HA +K G+++ ++LIDMY KCG +
Sbjct: 233 RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM 292
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
DD F M +++V+W +I G QNG +A+ F+ M+ + KP+ +TF+ VL+ C
Sbjct: 293 DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 352
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+GLV++A F SM+ YG+ P EHY C++D LG+AG F + E LI +MP K D I
Sbjct: 353 SHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPII 412
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W +L AC H+N +L AE L P++PS YV+LSN+YA+LG S VR
Sbjct: 413 WEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSN 472
Query: 654 LGEKKA-GMSWIE 665
G K G SWI+
Sbjct: 473 RGVVKGRGYSWID 485
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 181/444 (40%), Gaps = 95/444 (21%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
+ G D GN+L+ MY +++A K+F+ + IVSW ++T + A+
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+ + M E G EPN YS +L +C + D+ R + ++I+R + NTLL Y
Sbjct: 61 VLSLMQEAG-FEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSV----TTWNTLLSGY 115
Query: 151 VK------CGSLTRKLFDQYSNWAASAYGNVALWNS-----MLSGGKQVHAFCVKRGFEK 199
+ L R++ Q+ N + +S +L G+QVH+ V+
Sbjct: 116 CQEEQHQDTIELFRRM--QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHN 173
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFEC----- 245
+ + L+DMY KCG+I ++FN M ERDVV W II G F+
Sbjct: 174 DMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMR 233
Query: 246 ----------------SCFTLSA-------------------------LVDMYSNCNVLC 264
SC LS+ L+DMY+ C +
Sbjct: 234 ENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMD 293
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+AR FD N+ WN MI GY N ++A+ L ++ ++ D+ TF +
Sbjct: 294 DARLFFDTM------MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIA 347
Query: 325 ALKACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
L C + + FNS +G+I + + + LID R G
Sbjct: 348 VLTGCSHSGLVDKAMAFFNS--MENSYGIIPLAEHY------TCLIDALGRAGRFVEVEA 399
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKH 400
L H++P K D + W L+ C H
Sbjct: 400 LIHKMPCKDDPIIWEVLLAACVVH 423
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +H +++ L D+F + L+ MY+ + A +F++M +++
Sbjct: 147 LSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDV 206
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W ++++ T + A + M E G + P Y++++ +CS + GR IH
Sbjct: 207 VCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSCSRLSSIPHGRQIHA 265
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
++ ++ + + + + L+DMY KCG++ R FD N+ WN M+ G Q
Sbjct: 266 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM------MMKNIVAWNEMIHGYAQ 319
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + + + VT +++ G +D +A FN M
Sbjct: 320 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 368
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 295/637 (46%), Gaps = 105/637 (16%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C RS++ G+ +H ++K D+ N++L+MY SL DA K+FD M +N+VSW
Sbjct: 73 CSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSW 132
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ Y+ N + A+ Y ML+ G V P+ F + +++KACS GD+ LGR +H +
Sbjct: 133 TSVIAGYSQNGQGGNALEFYFQMLQSG-VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------- 184
+ + + N L+ MY K + L D +S A ++ W SM++G
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNVIIDAL-DVFSRMATR---DLISWGSMIAGFSQLGYEL 247
Query: 185 -------------------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
G+Q+H +K G ++ SL
Sbjct: 248 EALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
DMY KCG + +F + D+V+W II G
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAG-------------------------- 341
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
AYG A +EAI S + G+ D T S L
Sbjct: 342 -----------FAYGGDA---------------KEAIAFFSQMRHQGLIPDEITVRSLLC 375
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
AC + +QVHG I G +LD V + L+ +YA+ ++ A+ F + D
Sbjct: 376 ACTSPSELYQ--GMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ ++ C H + L + M S + +++VL + S+ G QVH
Sbjct: 434 LVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHC 493
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ +K G + LID+Y KCG + +F + DVVSW+ +I+G Q G +E
Sbjct: 494 YALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEE 553
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F+ M + +KPN +TF+GVL+AC H GLVEE W ++ +M+ E+G+ P EH CMV
Sbjct: 554 ALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMV 613
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
DLL +AGC ++AE I +M F PD +W ++L AC++
Sbjct: 614 DLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACKS 650
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 186/383 (48%), Gaps = 12/383 (3%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+++MY C L +A+K+FD A NV W S+I+GY N Q A+ +
Sbjct: 104 ILNMYGKCGSLKDAQKVFD------AMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
SG+ D +TF S +KAC +L + Q+H ++ S + I + LI +Y + +
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIG--LGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVI 215
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKV 431
AL++F R+ +D+++W +I G ++ G A F++M++ + N+FI SV
Sbjct: 216 IDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSA 275
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
CS L G+Q+H +K G ++ SL DMY KCG + +F + D+V+W
Sbjct: 276 CSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAW 335
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
II G G AKEAIA+F +M L P+EIT +L AC + + + +
Sbjct: 336 NAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYIN- 394
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+ GL+ + ++ + + DA EM D W ++L AC H+ + V
Sbjct: 395 KMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVF 454
Query: 612 IIAEQLLATSPEDPSKYVMLSNV 634
+ +L+ S P Y+ L+NV
Sbjct: 455 GLL-KLMCISQHRPD-YITLTNV 475
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 16/259 (6%)
Query: 302 EAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI + +G C+ T+ + AC L + ++H ++ S D + +
Sbjct: 45 EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEH--GRKIHDHMLKSKSHPDLTLQN 102
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+++++Y + G++K A ++F +P+++VV+W+ +I G +++G A + M+ S
Sbjct: 103 HILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMP 162
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+QF S++K CS L + G+Q+HA +K F I +LI MY K I D L +F
Sbjct: 163 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVF 222
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLV 539
M RD++SW +I G Q G EA+ YF+EM+ Q PNE F V SAC
Sbjct: 223 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS----- 277
Query: 540 EEAWTIFTSMKPEYGLEPH 558
+ ++PEYG + H
Sbjct: 278 -------SLLQPEYGRQLH 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 185/491 (37%), Gaps = 116/491 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C I G+ LH ++K I N L+SMY + DA +F MA +++
Sbjct: 171 IKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDL 230
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+ ++ A+ + ML G PN F++ +V ACS + GR +H
Sbjct: 231 ISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHG 290
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----W----AASAYGN---- 174
+ L D +L DMY KCG L+ R +F Q W A AYG
Sbjct: 291 MSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKE 350
Query: 175 -VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+A ++ M L G QVH + K G + + +L+
Sbjct: 351 AIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLT 410
Query: 210 MYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCF------------------------- 243
MY KC E+ D + F M D+VSW I+ C
Sbjct: 411 MYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYI 470
Query: 244 -------------------ECSCFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
+ C+ L + L+D+Y+ C L ARK+FD
Sbjct: 471 TLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSV 530
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ +V W+S+I GY EEA+ L + + + TF L AC
Sbjct: 531 IN------PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC---- 580
Query: 334 NFNSRFALQVHGLIVTSGYELDYIV------GSNLIDLYARLGNVKSALELFHRLP-KKD 386
S L G + E ++ + S ++DL AR G + A H++ D
Sbjct: 581 ---SHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPD 637
Query: 387 VVAWSGLIMGC 397
+V W L+ C
Sbjct: 638 IVVWKTLLAAC 648
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SI+ G +HC +K GL+ DI N L+ +YA SL A K+FD + ++VSW++++
Sbjct: 484 SIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLIL 543
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KL 136
Y A++L+ M V+PN + VL ACS G ++ G ++ + +E +
Sbjct: 544 GYAQFGYGEEALKLFKTMRRL-DVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGI 602
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
+ ++D+ + G L + + + A ++ +W ++L+ K VH +R
Sbjct: 603 VPTREHCSCMVDLLARAGCLNEA--EAFIHQMAFD-PDIVVWKTLLAACKSVHQALARRT 659
Query: 197 ----FEKEDVTLTSLIDMYLKCGEID 218
++K+ +T + ++ +ID
Sbjct: 660 NLKVWKKQHEVITLVKGKFVYVKQID 685
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 219/767 (28%), Positives = 350/767 (45%), Gaps = 120/767 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG R ++ G +H ++ G Q+ LL+MY +L DA +F+EMA
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 66 RKNIVSWTTMVTAYTSNKRPNW--AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
KN+V+W M+ Y S + W A+ L+ ML G V+ N + VL + L
Sbjct: 121 EKNVVTWNAMLGVY-SLQGCCWKLAVELFTRMLLEG-VKANVITFLNVLNSVVDPDALRK 178
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSM 181
G+ IH + + D + L++ Y KCGSLT RK+FD +V WNSM
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFD------GMPCRSVGTWNSM 232
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+S GK V + F
Sbjct: 233 ISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSF 292
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFEC------ 245
E + T+LI MY +C +D +F M + ++++W+ II C E
Sbjct: 293 ELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRM 352
Query: 246 -----------------SCFTLSALVDMYSNCNVL----------------------CE- 265
+ FT + ++ S ++L CE
Sbjct: 353 MQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCES 412
Query: 266 ---ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
AR +FDQ N+ WNSMI YV E++++A+ L + G+ D F
Sbjct: 413 PDDARTVFDQLE------LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNF 466
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L AC + + R VH + SG +V ++L+++YA+ G + A + +
Sbjct: 467 MTILGACT--IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEM 524
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++ + AW+ LI G HG + A ++ + V++ SVL C+ SL GK
Sbjct: 525 DEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGK 584
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+H+ V+ G + + I +L +MY KCG +++ +F MP R VSW G++ Q+G
Sbjct: 585 MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHG 644
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
++E + ++M Q +K N ITF+ VLS+C HAGL+ E F S+ + G+E EHY
Sbjct: 645 ESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHY 704
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C+VDLLG+AG +AE+ I++MP +P WAS+L AC + + A +LL P
Sbjct: 705 GCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDP 764
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEVSS 668
+ S V+LSN+Y+ G W + +K+R+A + +K G+S I+V +
Sbjct: 765 GNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKN 811
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 265/593 (44%), Gaps = 27/593 (4%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY+ SL DA F ++ +N+VSW M++AY+S K A+ L++ ML G V PN
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEG-VAPNAI 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN 166
AVL +C +L G L+H +T++ LL+MY KCG+ L D S
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGT----LLDAQSV 115
Query: 167 WAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
+ A NV WN+ML G + C K E T ++ +K I L + N
Sbjct: 116 FEEMAEKNVVTWNAML-GVYSLQGCCWKLAVE----LFTRMLLEGVKANVI-TFLNVLNS 169
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALV-----DMYSNCNVLCEARKLFDQYSSWAASAY 281
+ + D + I C S +L V + Y+ C L +ARK+FD +
Sbjct: 170 VVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS---- 225
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
V WNSMIS Y ++E++ EA + + G D TF S L AC+N +
Sbjct: 226 --VGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETL--QHGK 281
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
V I + +ELD VG+ LI +YAR + + A ++F R+ + +++ WS +I HG
Sbjct: 282 HVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHG 341
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
A FR M N+ S+L + + L ++H + G +
Sbjct: 342 HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRN 401
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+++Y +C DD +F + +++SW +I Q R +A+ F+ M Q ++P
Sbjct: 402 ALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQP 461
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ + F+ +L AC G + E GL +V++ +AG D AE +
Sbjct: 462 DRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVI 520
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL-LATSPEDPSKYVMLSN 633
+ EM + T W ++ H ++ ++L L P D ++ + N
Sbjct: 521 LQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLN 572
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L C S+ +GK +H ++ GL D+ N L +MY+ S+ +A ++
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++ VSW M+ AY + ++L M + G V+ NG + +VL +CS +G
Sbjct: 622 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG-VKLNGITFVSVLSSCSHAGL 680
Query: 121 LDLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ G + H +E T L+D+ + G L
Sbjct: 681 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 717
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 215/751 (28%), Positives = 342/751 (45%), Gaps = 122/751 (16%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKNIVSWTTMVTAYTSNK 83
L R+ K G S D T ++ L DA L M A + V+W +++ Y
Sbjct: 119 LFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQS 178
Query: 84 RPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
+ LY M +G + P ++++L A + + GR +H R L+ + +
Sbjct: 179 GIEHEVFGLYKDMRCWG-LWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFV 237
Query: 143 MNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSG---------------- 184
++L+++Y KCG + + FD S NV +WN+ML+G
Sbjct: 238 GSSLINLYAKCGCIGDAILVFD------CSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY 291
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
G+QV +K + + +DM+ K G
Sbjct: 292 MKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGA 351
Query: 217 IDDGLALFNFMPERDVVSW----------------------------------------- 235
IDD LFN + +D VSW
Sbjct: 352 IDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINA 411
Query: 236 --------TGIIVGCFE-----CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
TG + C CS + S+L+D YS + RK+ Q +
Sbjct: 412 CSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDA------ 465
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
++ N +I+G V N + +EAI L + G+ S+TF+S L C LL+ S
Sbjct: 466 SSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLS--SIIGK 523
Query: 342 QVHGLIVTSGY-ELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTK 399
QVH + SG+ D VG +L+ Y + + A +L +P K++V W+ ++ G +
Sbjct: 524 QVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQ 583
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+G + + L F M + + ++ +S+LK CS + +L GK++H +K GF
Sbjct: 584 NGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTA 643
Query: 460 LTSLIDMYLKCGEIDDGLALFK-FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+++IDMY KCG+I FK ++D+ W +I+G +NG A EA+ FQ+M S+
Sbjct: 644 TSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQ 703
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+K +E+TFLGVL AC HAGL+ E F SM YG+ P ++HY C +DLLG+ G +A
Sbjct: 704 IKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEA 763
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+++I E+PF+PD IWA+ L AC H + + I A++L+ P++ S YV+LSN+YA
Sbjct: 764 QEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAA 823
Query: 639 GMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
G W R+A ++ G K G SWI V +
Sbjct: 824 GNWVEAKMAREAMREKGATKFPGCSWITVGN 854
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/662 (25%), Positives = 297/662 (44%), Gaps = 84/662 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C + ++ GK HC K GL F L++MYA + DA ++F ++
Sbjct: 34 LAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGIS 93
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V W +M++ Y R A+ L+ M + GS P+ AV+ A + G L+ R
Sbjct: 94 LPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGS-SPDRVTCVAVVCALTALGRLEDAR 152
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN---WAASAYGNVALWNSML 182
+ R+ TV N ++ Y + + ++F Y + W + + + SML
Sbjct: 153 TLLHRMPAPS---STVAWNAVISGYAQQSGIEHEVFGLYKDMRCWG--LWPTRSTFASML 207
Query: 183 SG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
S G+QVHA V+ G + +SLI++Y KCG I D + +F+ E++VV
Sbjct: 208 SAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVV 267
Query: 234 SWTGIIVG------------------------------------------CF--ECSCFT 249
W ++ G C + C T
Sbjct: 268 MWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVT 327
Query: 250 L-----------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ +A +DM+S + +A+ LF+ + Y + WN+++ G NE
Sbjct: 328 IKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLIT------YKDTVSWNALLVGLTHNE 381
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
++EEAI +L ++ G+ D +F + + AC N+ + Q+H L + ++ V
Sbjct: 382 EDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIR--ATETGKQIHCLAMKHSICSNHAV 439
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
GS+LID Y++ G+V+S ++ ++ +V + LI G ++ A LF+ ++
Sbjct: 440 GSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGL 499
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGL 477
+ F SS+L C+ L S GKQVH + +K GF +D ++ SL+ YLK +D
Sbjct: 500 KPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDAN 559
Query: 478 ALFKFMPE-RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
L MP+ +++V WT I+ G QNG + +++ F M + P+E+TF +L AC
Sbjct: 560 KLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEM 619
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
+ + I + + G + ++D+ + G + + E+ K D T+W S
Sbjct: 620 TALSDGKEIH-GLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNS 678
Query: 597 ML 598
M+
Sbjct: 679 MI 680
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 240/567 (42%), Gaps = 80/567 (14%)
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
G V P+ F +A L ACS G L G+ H + L L++MY +CG +
Sbjct: 25 GGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGD 84
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSL 207
R++F S + W SM+SG G+ A C+ K G + VT ++
Sbjct: 85 ARRVFGGIS------LPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAV 138
Query: 208 IDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECS--------------CF---- 248
+ G ++D L + MP V+W +I G + S C+
Sbjct: 139 VCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWP 198
Query: 249 ---TLSALVDMYSNCNVLCEARKLF-----------------------------DQYSSW 276
T ++++ +N E R++ D +
Sbjct: 199 TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVF 258
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
S NV +WN+M++G V NE EAI + ++ G+ D +T+ S L AC +L +
Sbjct: 259 DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC 318
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
QV + + + + V + +D++++ G + A LF+ + KD V+W+ L++G
Sbjct: 319 --LGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVG 376
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
T + + A + + M ++ ++V+ CS + + GKQ+H +K
Sbjct: 377 LTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSN 436
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+SLID Y K G+++ + + +V +I G QN R EAI FQ++++
Sbjct: 437 HAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLR 496
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL--EHYYCMVDLLG---Q 571
LKP+ TF +LS C GL+ +I Y L+ + V L+G +
Sbjct: 497 DGLKPSSFTFSSILSGC--TGLLS---SIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLK 551
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASML 598
A +DA +L+ EMP + W +++
Sbjct: 552 ARMPEDANKLLIEMPDHKNLVEWTAIV 578
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 202/498 (40%), Gaps = 117/498 (23%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C S G+ + C IK + +F N L M++ F +++DA LF+ +
Sbjct: 305 VSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITY 364
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW ++ T N+ AI + M V P+ ++ V+ ACS + G+
Sbjct: 365 KDTVSWNALLVGLTHNEEDEEAIHMLKGM-NLDGVTPDEVSFATVINACSNIRATETGKQ 423
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVAL------- 177
IH + + + + ++L+D Y K G + RK+ Q + ++ NV +
Sbjct: 424 IHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV-DASSIVPRNVLIAGLVQNN 482
Query: 178 -----------------------WNSMLSG---------GKQVHAFCVKRGFEKEDVTL- 204
++S+LSG GKQVH + +K GF +D ++
Sbjct: 483 REDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVG 542
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVGCFEC------------------ 245
SL+ YLK +D L MP+ +++V WT I+ G +
Sbjct: 543 VSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDV 602
Query: 246 ------------SCFTLSALVD-------------------------MYSNCNVLCEARK 268
+C ++AL D MYS C + + +
Sbjct: 603 HPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFE 662
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F + S ++ LWNSMI G+ N +EA+ L + S + D TF L A
Sbjct: 663 AFKELKS-----KQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIA 717
Query: 329 CIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
C + L++ + +V+G++ +D+ + IDL R G+++ A E+ + LP
Sbjct: 718 CAHAGLISEGRHYFDSMSKVYGIMP----RVDHY--ACFIDLLGRGGHLQEAQEVINELP 771
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W+ + C H
Sbjct: 772 FRPDGVIWATYLAACRMH 789
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 322/643 (50%), Gaps = 33/643 (5%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ + N ++S Y L+ A LFD M + +V+WT ++ Y N + A +L+ M
Sbjct: 73 KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
++ P+ ++ +L C+ + + +H KL +DT L T+ ++ +K
Sbjct: 133 CRSCTL-PDYVTFTTLLPGCNDAVPQNAVGQVHAFAV--KLGFDTNLFLTVCNVLLKSYC 189
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVKR--GFEKEDVTLTS 206
R+L + + +N++++G ++ +H F R G + D T +
Sbjct: 190 EVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSG 249
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
++ + + G L + F + ++ YS + + E
Sbjct: 250 VLKAVVGLHDFALGQQLHGLS-----------VTTGFSRDASVGNQILHFYSKHDRVLET 298
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R LF++ +Y N +IS Y EQ EE++ L + G ++ F + L
Sbjct: 299 RNLFNEMPELDFVSY------NVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATML 352
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
NL + + QVH + + + VG++L+D+YA+ A +F L ++
Sbjct: 353 SIAANLSSL--QVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRS 410
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V+W+ LI G + GL+ LF M +N +Q ++VLK + ASL GKQ+HA
Sbjct: 411 TVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHA 470
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
F ++ G + + + L+DMY KCG I D + +F+ MP+R+ VSW +I NG +
Sbjct: 471 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEA 530
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
AI F +MIQS L+P+ ++ LGVL AC H G VE+ F +M P YG+ P +HY CM+
Sbjct: 531 AIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACML 590
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP-EDP 625
DLLG+ G F +AE+L+ EMPF+PD+ +W+S+L AC + N L AEQL + D
Sbjct: 591 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDA 650
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+ YV +SN+YA G W+++ V+KA ++ G KK SW+EV+
Sbjct: 651 AAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVN 693
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 140/331 (42%), Gaps = 25/331 (7%)
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++V A +K GF + ++ L+ G++ L +++ MP ++ VS +I G
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISG---- 84
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y L AR LFD A V W ++ Y N +EA
Sbjct: 85 -----------YVKMGDLSSARHLFD------AMPDRTVVTWTILMGWYAGNNHFDEAFK 127
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI--VGSNLI 363
L + S D TFT+ L C + + N+ QVH V G++ + V + L+
Sbjct: 128 LFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNA--VGQVHAFAVKLGFDTNLFLTVCNVLL 185
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
Y + + A LF + KD V ++ LI G K GL + A LF M S + F
Sbjct: 186 KSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDF 245
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
S VLK L G+Q+H V GF ++ ++ Y K + + LF M
Sbjct: 246 TFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEM 305
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
PE D VS+ +I Q + +E++ F+EM
Sbjct: 306 PELDFVSYNVVISSYSQAEQYEESLNLFREM 336
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 163/428 (38%), Gaps = 99/428 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LH + G S+D GN +L Y+ + + LF+EM + VS+ ++++Y+
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
++ ++ L+ M G N F ++ +L + L +GR +H + +
Sbjct: 323 AEQYEESLNLFREMQCMGFDRRN-FPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH 381
Query: 142 LMNTLLDMYVKC-----GSLTRKLFDQYS--NWAASAYGNV---------ALWNSMLSG- 184
+ N+L+DMY KC L K Q S +W A G V L+ M
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
GKQ+HAF ++ G + + + L+DMY KCG I D +
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+F MP+R+ VSW +I
Sbjct: 502 QVFEEMPDRNAVSWNALI------------------------------------------ 519
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRF 339
S Y N E AI + + SG+ DS + L AC + + + F
Sbjct: 520 ----------SAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEF 569
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCT 398
+ + + + Y + ++DL R G A +L +P + D + WS ++ C
Sbjct: 570 FQAMSPIYGITPKKKHY---ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACR 626
Query: 399 KHGLNSLA 406
+ SLA
Sbjct: 627 IYKNQSLA 634
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 28/266 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S++ G+ +HC+ I + GN+L+ MYA ++A +F +++++ VSWT +++
Sbjct: 360 SLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALIS 419
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y ++L+ M ++ + ++ VLKA + L LG+ +H I R
Sbjct: 420 GYVQKGLHGAGLKLFTKM-RGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL 478
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS-------GGKQV 188
+ + L+DMY KCGS+ ++F++ + N WN+++S G +
Sbjct: 479 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR------NAVSWNALISAYADNGDGEAAI 532
Query: 189 HAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
AF ++ G + + V++ ++ CG ++ G F M GI +
Sbjct: 533 GAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMS-----PIYGITPKKKHYA 587
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQ 272
C ++D+ EA KL D+
Sbjct: 588 C-----MLDLLGRNGRFAEAEKLMDE 608
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLAS------LRRGKQVHAFCVKRGF-EKEDITLTS 462
R + + V+ II + +C ++ LRRG+ A V K ++ +
Sbjct: 21 LRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNT 80
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+I Y+K G++ LF MP+R VV+WT ++ N EA F++M +S P+
Sbjct: 81 MISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPD 140
Query: 523 EITFLGVLSACRHA 536
+TF +L C A
Sbjct: 141 YVTFTTLLPGCNDA 154
>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 718
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/657 (28%), Positives = 321/657 (48%), Gaps = 66/657 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C SI + + + +I + + IF N + Y L DA +LFDEM +++ SW
Sbjct: 67 CSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSW 126
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ AYT A+ L+ M + G V N +++VLK+CS DL L R IH I
Sbjct: 127 NAIIKAYTQCGYAEKALGLFKDMNKEG-VFANEITFASVLKSCSDVLDLSLSRQIHGLIV 185
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYG----------------- 173
+ + +L + L+D+Y KC ++ R +F++ N +
Sbjct: 186 KCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVK 245
Query: 174 -------------NVALWNSM--------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
N N++ L+ G Q+HAF +K FE+++ +SL +MY
Sbjct: 246 MFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYA 305
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG+++ +F+ RDV+SWT ++ S + LS EAR+LF++
Sbjct: 306 KCGKLESARMIFDQHGSRDVISWTSMV------SAYALSGRTR---------EARELFEK 350
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
W+ V WN+M++GY+ + Q EEA+ + + + ID T L C +
Sbjct: 351 MPEWS------VVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGI 404
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWS 391
+ Q HG I G+ +VG+ L+D+Y + GN++SA F+++ + +D ++W+
Sbjct: 405 SDV--EMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWN 462
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
L+ +H + A ++F +M + F ++L C+ + +L +GK++H F ++
Sbjct: 463 ALLTSYARHHQSEQAMMIFGEM-QWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRN 521
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+ + + +L+DMY KC + L +F RDV+ W II+GC NGR KE + F
Sbjct: 522 GYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLF 581
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+M + +KP+ +TF GVL AC + G V+ A F SM + + P LEHY CM++L +
Sbjct: 582 GQMEKEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSR 641
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
C E + MPF P ++ + AC+ H ++ +AEQL +P S++
Sbjct: 642 YRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQF 698
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 238/542 (43%), Gaps = 72/542 (13%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY 164
+Y+++ + CS + + R I + L+N ++ Y KC L R+LFD+
Sbjct: 59 LYASLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEM 118
Query: 165 S-----NWAA--SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
+W A AY L K ++ K G ++T S++ C ++
Sbjct: 119 PQRDGGSWNAIIKAYTQCGYAEKALGLFKDMN----KEGVFANEITFASVLK---SCSDV 171
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTL-SALVDMYSNCNVLCEARKLFDQYSSW 276
D L+L R + G+IV C C L SALVD+Y C V+ EAR +F++ +
Sbjct: 172 LD-LSL-----SRQI---HGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENC 222
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
N WN ++ Y+ EA+ + + + + ++TF++AL AC + N
Sbjct: 223 ------NDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALN 276
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
+Q+H + +E D V S+L ++YA+ G ++SA +F + +DV++W+ ++
Sbjct: 277 E--GMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSA 334
Query: 397 CTKHGLNSLAYLLFRDMI-------------------------------NSNQDVNQFII 425
G A LF M + +D++ +
Sbjct: 335 YALSGRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITL 394
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+L VC+ ++ + GKQ H F + GF + +L+DMY KCG + F M +
Sbjct: 395 GLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQ 454
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
RD +SW ++ ++ ++++A+ F EM Q KP+ TF +L+AC + +++
Sbjct: 455 SRDNISWNALLTSYARHHQSEQAMMIFGEM-QWETKPSTFTFGTLLAACANIFALDQGKE 513
Query: 545 IFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
I M + Y L+ + +VD+ + C A + + D +W S++ C
Sbjct: 514 IHGFMIRNGYNLDTVISG--ALVDMYSKCRCLSYALTVFNRAGSR-DVILWNSIILGC-C 569
Query: 604 HN 605
HN
Sbjct: 570 HN 571
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 165/447 (36%), Gaps = 133/447 (29%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + +H I+K G ++ G+ L+ +Y +++A +F+E+ N
Sbjct: 165 LKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCND 224
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W +V Y A++++ M + V P F +S L ACS L+ G IH
Sbjct: 225 VTWNVIVRRYLDVGNEREAVKMFFKMFQ-TDVRPLNFTFSNALIACSAMRALNEGMQIHA 283
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYG------- 173
+ K E D + ++L +MY KCG L R +FDQ+ +W + SAY
Sbjct: 284 FAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTRE 343
Query: 174 -----------NVALWNSMLSG-------------------------------------- 184
+V WN+ML+G
Sbjct: 344 ARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAG 403
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTG 237
GKQ H F + GF + +L+DMY KCG + F M + RD +SW
Sbjct: 404 ISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNA 463
Query: 238 IIV-----------------------------GCFECSCFTLSA---------------- 252
++ G +C + A
Sbjct: 464 LLTSYARHHQSEQAMMIFGEMQWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGY 523
Query: 253 ---------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
LVDMYS C L A +F++ S +V LWNS+I G N + +E
Sbjct: 524 NLDTVISGALVDMYSKCRCLSYALTVFNRAGS------RDVILWNSIILGCCHNGRGKEV 577
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACI 330
+ L + G+ D TF L AC+
Sbjct: 578 LKLFGQMEKEGVKPDHVTFHGVLLACM 604
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 129/309 (41%), Gaps = 80/309 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C R++ +G +H IK +D ++L +MYA L A +FD+ ++
Sbjct: 265 ALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRD 324
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN----GFMYS--------------- 109
++SWT+MV+AY + R A L+ M E+ V N G++ S
Sbjct: 325 VISWTSMVSAYALSGRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRR 384
Query: 110 -----------AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+L C+ D+++G+ H I R ++ N LLDMY KCG+L
Sbjct: 385 TTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRS 444
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
R F Q S + N++ WN++L+
Sbjct: 445 ARVWFYQMSQ----SRDNIS-WNALLTSYARHHQSEQAMMIFGEMQWETKPSTFTFGTLL 499
Query: 185 -----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
GK++H F ++ G+ + V +L+DMY KC + L +FN RDV+
Sbjct: 500 AACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVI 559
Query: 234 SWTGIIVGC 242
W II+GC
Sbjct: 560 LWNSIILGC 568
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 22/344 (6%)
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
AL N++I+ N ++A+++L +SS + + S + C + L+ ++ H
Sbjct: 27 ALTNTIINHLKANRL-QKAVSILFASNSS---VPYSLYASLFQLCSSTLSIVEARKIESH 82
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
++T + + I+ Y + +K A ELF +P++D +W+ +I T+ G
Sbjct: 83 --LITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAE 140
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF+DM N+ +SVLK CS + L +Q+H VK GF I ++L+
Sbjct: 141 KALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALV 200
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
D+Y KC + + +F + + V+W I+ G +EA+ F +M Q+ ++P
Sbjct: 201 DVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNF 260
Query: 525 TFLGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
TF L AC + G+ A+ I + + + L + Y L ++
Sbjct: 261 TFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKL-------ESA 313
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
++I + D W SM+ A T+ A +L PE
Sbjct: 314 RMIFDQHGSRDVISWTSMVSAYALSGRTRE----ARELFEKMPE 353
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 217/706 (30%), Positives = 348/706 (49%), Gaps = 60/706 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAH 58
+D + A + RS+ +S+H +++ L N LL+ YA L A
Sbjct: 55 LDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAAL 114
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKACS- 116
LFD M ++ V++ +++ A +R A+ ML G P F +VL ACS
Sbjct: 115 ALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG--HPLTSFTLVSVLLACSH 172
Query: 117 LSGDLDLGRLIHERITREK-LEYDTVL-MNTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
L+ DL LGR H + L+ D N LL MY + G + + LF
Sbjct: 173 LAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPG- 231
Query: 173 GNVALWNSMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
G V WN+M+S G+ + V RG + VT S + + + G +
Sbjct: 232 GGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREM 291
Query: 224 FNF-MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + D+ + + F SALVDMY++ + AR +FD +
Sbjct: 292 HAYVLKDADLAA-----------NSFVASALVDMYASHERVGAARLVFDMVPA----GER 336
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFAL 341
+ LWN+MI GY +E+A+ L + + + +G+ T L +C F + A
Sbjct: 337 QLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEA- 395
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
VHG +V G + V + L+DLYARLG++ +A +F + +DVV+W+ LI GC G
Sbjct: 396 -VHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQG 454
Query: 402 LNSLAYLLFRDMIN-------SNQD-----------VNQFIISSVLKVCSCLASLRRGKQ 443
A+ L R+M + +D N + ++L C+ LA+ RGK+
Sbjct: 455 HIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKE 514
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H + V+ + + ++L+DMY KCG + A+F +P R+V++W +I+ G +G
Sbjct: 515 IHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGL 574
Query: 504 AKEAIAYFQEMIQS-RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
EAIA F M+ S KPNE+TF+ L+AC H+G+V+ +F SMK +G+EP + +
Sbjct: 575 GDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLH 634
Query: 563 YCMVDLLGQAGCFDDAEQLIAEM-PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
C VD+LG+AG D+A ++I+ M P + + W+S L AC H N L I AE+L
Sbjct: 635 ACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELE 694
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
P++ S YV+L N+Y+ G+W+ S+VR ++ G K+ G SWIE+
Sbjct: 695 PDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIEL 740
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/696 (28%), Positives = 316/696 (45%), Gaps = 116/696 (16%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++V L+ C + G+ H +++ G+ + G LL MY + DA +F ++
Sbjct: 48 QLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
W M+ +T + ++A+ Y ML G++ P+ + + V+KAC + LG
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALG 166
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R++H++I E D + ++L+ Y + G + R LFD+ + + LWN ML
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS------KDGVLWNVML 220
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
+G G Q+H V G E
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLE 280
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF------ECSC----- 247
+ +L+ MY KCG + D LF+ MP+ D+V+W G+I G E SC
Sbjct: 281 MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340
Query: 248 --------------------------------------------FTLSALVDMYSNCNVL 263
F SAL+D+Y C +
Sbjct: 341 ISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDV 400
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A K+FDQ + ++ + +MISGYVLN N A+ + + M +S T
Sbjct: 401 EMAHKIFDQRTPV------DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L ++HG I+ +G+ VGS ++D+YA+ G + A + F +
Sbjct: 455 SVLPACAGLAALT--LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGIS 512
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KD V W+ +I C+++G A LFR M + + IS+ L C+ L +L GK+
Sbjct: 513 XKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 572
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+HAF ++ F + ++LIDMY KCG +D +F M E++ VSW II G +GR
Sbjct: 573 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGR 632
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
K+++ F M+ ++P+ +TFL ++SAC HAG V+E F M E G+ +EHY
Sbjct: 633 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 692
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
CMVDL G+AG ++A +I MPF PD +W L+
Sbjct: 693 CMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYLE 728
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C ++ GK +H +++ D+F + L+ MY+ +L+ A ++F
Sbjct: 550 DCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 609
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M KN VSW +++ AY ++ R ++ L++ ML G ++P+ + A++ AC +G +
Sbjct: 610 DMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQV 668
Query: 122 DLGRLIHERITRE 134
D G +T E
Sbjct: 669 DEGIHYFRCMTEE 681
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 326/665 (49%), Gaps = 42/665 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + + + K GL Q+ F L+S++ + S+++A ++F+ + K V + TM+
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ + A++ + M Y VEP + ++ +LK C +L +G+ IH + +
Sbjct: 109 GFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------- 187
D M L +MY KC + RK+FD+ ++ WN++++G Q
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPER------DLVSWNTIVAGYSQNGMARMAL 221
Query: 188 --VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V + C + + +T+ S++ I G + + S I
Sbjct: 222 EMVKSMC-EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS------ 274
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALVDMY+ C L AR+LFD NV WNSMI YV NE +EA+
Sbjct: 275 -----TALVDMYAKCGSLETARQLFD------GMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ + AL AC +L + RF +H L V G + + V ++LI
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF---IHKLSVELGLDRNVSVVNSLIS 380
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + V +A +F +L + +V+W+ +I+G ++G A F M + + F
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
SV+ + L+ K +H ++ +K T+L+DMY KCG I +F M
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ER V +W +I G G +G K A+ F+EM + +KPN +TFL V+SAC H+GLVE
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F MK Y +E ++HY MVDLLG+AG ++A I +MP KP ++ +ML AC+ H
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N AE+L +P+D +V+L+N+Y MW+ + +VR + + G K G S
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 664 IEVSS 668
+E+ +
Sbjct: 681 VEIKN 685
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 217/542 (40%), Gaps = 116/542 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG ++ GK +H ++K G S D+F L +MYA +N+A K+FD M +++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T+V Y+ N A+ + M E +++P+ +VL A S + +G+ IH
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R + + L+DMY KCGSL R+LFD NV WNSM+
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD------GMLERNVVSWNSMIDAYVQ 314
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+ +H V+ G ++
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ SLI MY KC E+D ++F + R +VSW +I+G
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG---------------------- 412
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ N + +A+ S + S + D++T+
Sbjct: 413 ------------------------------FAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S + A L + A +HG+++ S + + V + L+D+YA+ G + A +F +
Sbjct: 443 SVITAIAEL--SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
++ V W+ +I G HG A LF +M N SV+ CS + G +
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 444 VHAFCVKRGFEKEDITLT-----SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
C E I L+ +++D+ + G +++ MP + V+ G ++G
Sbjct: 561 ----CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 499 GQ 500
Q
Sbjct: 617 CQ 618
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 59/285 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L R I GK +H ++ G + L+ MYA SL A +LFD M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSW +M+ AY N+ P A+ ++ ML+ G V+P L AC+ GDL+ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSVMGALHACADLGDLERGR 357
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-----NVALWNS 180
IH+ L+ + ++N+L+ MY KC + + AAS +G + WN+
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEV---------DTAASMFGKLQSRTLVSWNA 408
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
M+ G K +H ++
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+K T+L+DMY KCG I +F+ M ER V +W +I G
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 325/624 (52%), Gaps = 35/624 (5%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
+ +LFDE ++ + ++ ++ N + A+ L+ + GS +G S VLK C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCG 103
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGN 174
D +G+ +H + + D + +L+DMY+K S+ ++FD+ N
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR------VKN 157
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY------LKCGEIDDGLALFNFMP 228
V W S+L+G +Q G ++ + L S + + + GLA +
Sbjct: 158 VVSWTSLLAGYRQ-------NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAA-DGAV 209
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
E+ V T +I + + F +++V+MYS ++ +A+ +FD + N WN
Sbjct: 210 EKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR------NAVSWN 263
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
SMI+G+V N + EA L + G+ + F + +K C N+ + FA Q+H ++
Sbjct: 264 SMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS--FAKQLHCQVI 321
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAY 407
+G + D + + L+ Y++ + A +LF + ++VV+W+ +I G ++G A
Sbjct: 322 KNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM 381
Query: 408 LLFRDMINSNQ-DVNQFIISSVLKVCSC-LASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LF M + N+F SSVL C+ AS+ +GKQ H+ +K GF ++L+
Sbjct: 382 NLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVT 441
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G I+ +FK +RD+VSW +I G Q+G K+++ F+EM L+ + IT
Sbjct: 442 MYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGIT 501
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+GV+SAC HAGLV E F M +Y + P +EHY CMVDL +AG + A LI +M
Sbjct: 502 FIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF TIW ++L AC H N +L + AE+L++ P+D + YV+LSN+YAT G W +
Sbjct: 562 PFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERA 621
Query: 646 KVRK-AGKKLGEKKAGMSWIEVSS 668
KVRK K +K+AG SWIEV +
Sbjct: 622 KVRKLMDMKKVKKEAGYSWIEVKN 645
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 204/481 (42%), Gaps = 113/481 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK +HC+ IK G +D+ G +L+ MY S+ D ++FDEM KN+VSWT+++ Y
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N A++L++ M G ++PN F ++AVL + G ++ G +H + + L+
Sbjct: 171 NGLNEQALKLFSQMQLEG-IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229
Query: 142 LMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N++++MY K S + +FD N N WNSM++G
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMENR------NAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
KQ+H +K G + + T+L+ Y KC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 216 EIDDGLALFNFMPE-RDVVSWTGIIVG--------------C-------FECSCFTLSAL 253
EIDD LF M ++VVSWT II G C E + FT S++
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403
Query: 254 VD-------------MYSNC-------NVLCEARKLFDQYSSWAASAYGNVAL------- 286
++ + +C N LC + L Y+ N
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463
Query: 287 ---WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSR-FA 340
WNSMISGY + ++++ + + S + +D TF + AC + L+N R F
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTK 399
L V + E Y S ++DLY+R G ++ A++L +++P W L+ C
Sbjct: 524 LMVKDYHIVPTME-HY---SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRV 579
Query: 400 H 400
H
Sbjct: 580 H 580
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 55/337 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKN 68
++ C + + K LHC++IK G D+ L+ Y+ + ++DA KLF M +N
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL-SGDLDLGRLI 127
+VSWT +++ Y N R + A+ L+ M VEPN F +S+VL AC+ + ++ G+
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGG 185
H + + + L+ MY K G++ ++F + + ++ WNSM+SG
Sbjct: 421 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR------DLVSWNSMISGY 474
Query: 186 KQVHAFCVK-----------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
Q H C K + E + +T +I G +++G F+ M V
Sbjct: 475 AQ-HG-CGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM-----VK 527
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG- 293
I+ SC +VD+YS +L +A L ++ A + +W ++++
Sbjct: 528 DYHIVPTMEHYSC-----MVDLYSRAGMLEKAMDLINKMPFPAGA-----TIWRTLLAAC 577
Query: 294 ----------------YVLNEQNEEAITLLSHIHSSG 314
L Q+ A LLS+I+++
Sbjct: 578 RVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATA 614
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/750 (26%), Positives = 352/750 (46%), Gaps = 119/750 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L+ C +S+ K +H RI ++ L D F N+L+ +Y+ + AH +FD++
Sbjct: 8 LINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIP 67
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRL-------------------------------YNH 94
KNI S+ +++A+ + +A RL Y+
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDL 127
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M+ Y SV+P+ ++ V AC D++ GR H + + + + + N LL MY KCG
Sbjct: 128 MMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCG 187
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
L F + N + +M+ G G ++ +++G + V+L+
Sbjct: 188 -LNEDAFRVFEGIVEP---NEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLS 243
Query: 206 SLI-----------------------------------------------DMYLKCGEID 218
+++ DMY K G++D
Sbjct: 244 TILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMD 303
Query: 219 DGLALFNFMPERDVVSWTGIIVG------------CF---ECSCFTLSAL--VDMYSNC- 260
+F + + VVSW +I G CF +C + + ++M + C
Sbjct: 304 SAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACV 363
Query: 261 --NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+ R++FD SS ++ WN+++SGY + + EA+ L + D
Sbjct: 364 KSGDVKVGRQIFDCMSS------PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPD 417
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T L +C L + QVH + G+ D V S+LI++Y++ G ++ + +
Sbjct: 418 RTTLAIILSSCAELGLLEA--GKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHV 475
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F +L + DVV W+ +I G + + L A F+ M ++F +++ C+ L+SL
Sbjct: 476 FSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSL 535
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+G+Q+HA +K G+ +SL++MY KCG++ F MP +++V+W +I G
Sbjct: 536 FQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGY 595
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
NG EA++ +++MI S KP++ITF+ VL+AC H+ LV+E IF+SM ++ + P
Sbjct: 596 AHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPK 655
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
L+HY C++D LG+ G F++ E ++ MP+K D +W +L +C H N L AE+L
Sbjct: 656 LDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELH 715
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+P + + YV+L+N+Y+++G WD VR
Sbjct: 716 RLNPRNSAPYVLLANMYSSMGRWDDAQVVR 745
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 209/705 (29%), Positives = 343/705 (48%), Gaps = 86/705 (12%)
Query: 17 RSIKQGKSLHCRIIKYGL--SQDIFTGNNLLS---MYADFTSLNDAHKLF--DEMARKNI 69
+++K+ K LHC ++K GL + N L++ SL+ A F D+ ++
Sbjct: 36 KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASL 95
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ ++ Y S + AI LY ML G V P+ + + +L ACS L G +H
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIV-PDKYTFPFLLSACSKILALSEGVQVHG 154
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--G 185
+ + LE D + N+L+ Y +CG L RKLFD NV W S+++G G
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFD------GMLERNVVSWTSLINGYSG 208
Query: 186 KQVHAFCV-------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ + V + G E VT+ +I K +++ G + +++ E +
Sbjct: 209 RDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGM------ 262
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
E S ++ALVDMY C +C AR++FD+ A N+ ++N+++S YV +E
Sbjct: 263 -----ELSTIMVNALVDMYMKCGDICAARQIFDE------CANKNLVMYNTIMSNYVHHE 311
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ + +L + G D T S + AC L + + H ++ +G E +
Sbjct: 312 WASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLS--VGKSSHAYVLRNGLEGWDNI 369
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL---------- 408
+ +ID+Y + G ++A ++F +P K VV W+ LI G + G LA+
Sbjct: 370 SNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDL 429
Query: 409 ---------------------LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
LFR+M N ++ + + C L +L K V +
Sbjct: 430 VSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTY 489
Query: 448 CVKRGFEKEDITL-----TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
EK DI + T+L+DM+ +CG+ + +FK M +RDV +WT I G
Sbjct: 490 -----IEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEG 544
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ AI F EM++ ++KP+++ F+ +L+AC H G V++ +F SM+ +G+ PH+ HY
Sbjct: 545 NTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHY 604
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CMVDLLG+AG ++A LI MP +P+ +W S+L AC H N +L AE+L +P
Sbjct: 605 GCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAP 664
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
E +V+LSN+YA+ G W +++VR K+ G +K G S IEV
Sbjct: 665 ERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEV 709
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 260/564 (46%), Gaps = 68/564 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + ++ +G +H ++K GL DIF N+L+ YA+ ++ KLFD M +N+
Sbjct: 137 LSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNV 196
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+++ Y+ A+ L+ M E G VEPN V+ AC+ DL+LG+ +
Sbjct: 197 VSWTSLINGYSGRDLSKEAVSLFFQMGEAG-VEPNPVTMVCVISACAKLKDLELGKKVCS 255
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----------------WAAS 170
I+ +E T+++N L+DMY+KCG + R++FD+ +N WA+
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASD 315
Query: 171 AY-------------GNVALWNSM--------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
V + +++ LS GK HA+ ++ G E D ++ID
Sbjct: 316 VLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIID 375
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY+KCG+ + +F MP + VV+W +I G L A ++
Sbjct: 376 MYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMEL---------------AWRI 420
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ ++ WN+MI V EEAI L + + G+ D T AC
Sbjct: 421 FDEMLER------DLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + A V I + +D +G+ L+D+++R G+ SA+ +F R+ K+DV A
Sbjct: 475 GYLGALD--LAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSA 532
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ I G A LF +M+ + + ++L CS S+ +G+Q+
Sbjct: 533 WTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSME 592
Query: 450 K-RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
K G + ++D+ + G +++ + L + MP E + V W ++ C ++ +
Sbjct: 593 KAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVE-- 650
Query: 508 IAYFQEMIQSRLKPNEITFLGVLS 531
+A++ ++L P + +LS
Sbjct: 651 LAHYAAEKLTQLAPERVGIHVLLS 674
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 316/636 (49%), Gaps = 43/636 (6%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R +++GK +H R + GLS I N L+SMYA + L+ A +FD++ K++VSW
Sbjct: 97 CSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSW 156
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD-LDLGRLIHERI 131
M+ A A++L+ M +EPN +++V ACSL D ++G+ IH+RI
Sbjct: 157 NAMIAACARQGEAEQALQLFKRM----ELEPNEVTFASVFNACSLLPDHREVGKRIHDRI 212
Query: 132 TREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
LE + + ++ MY K G + R++F+ + NV WN+ML Q
Sbjct: 213 RGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQ------HKNVVSWNAMLGAYTQNN 266
Query: 188 -------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
V+ V + ++++VT+ + + + G+ L +
Sbjct: 267 LDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELS-----------VA 315
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
++ + +AL+ MY CN L AR++F + + +V W ++I Y + +N
Sbjct: 316 HGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAH------DVVSWTALIVAYTQHGRN 369
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + GM D TFTS L AC N + AL L G+ D ++ +
Sbjct: 370 REALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFS-DGVLVA 428
Query: 361 NLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
LI++Y + G + + E+F K VV W+ +I + G + A L+ M D
Sbjct: 429 ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLD 488
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
++ +SS+L C+ L L +G+Q+H R + + L +LI MY CGEI + A
Sbjct: 489 PDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKA 548
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+FK M RDVVSWT +I Q G A+ A+ ++ M+ ++P E TFL V AC HAGL
Sbjct: 549 VFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGL 608
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E F SM E + P +HY C+V +L +AG ++AE L+ MPF P W S+L
Sbjct: 609 VDECKWYFQSM-IEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLL 667
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
AC TH + K A++ + +D + YV+LSNV
Sbjct: 668 GACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 259/529 (48%), Gaps = 41/529 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ QG+ +H I+ GL+ D F G++LL MY S++DA ++F + R+++ SW ++
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
A+ N+ AI ++ M G ++P+ S+VL ACS DL+ G+ IH R L
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAG-IKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLS 119
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVH 189
++ N L+ MY +C L R +FD+ + +V WN+M++ +Q
Sbjct: 120 SSIIVQNALVSMYARCSRLDVARVVFDKIES------KSVVSWNAMIAACARQGEAEQAL 173
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
+ E +VT S+ + C + D + + +R I E +
Sbjct: 174 QLFKRMELEPNEVTFASVFN---ACSLLPDHREVGKRIHDR-------IRGSHLEANVTV 223
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+A+V MY + AR++F+ + NV WN+M+ Y N + EA+ +
Sbjct: 224 ATAIVTMYGKFGKVGMARQVFNGIQ------HKNVVSWNAMLGAYTQNNLDREALEVYHE 277
Query: 310 IHSSGMCIDSYTFTSAL--KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + + D T AL A + LL + +++H L V GY+ + V + LI +Y
Sbjct: 278 MVAQKVQRDEVTVVIALGISASLRLL----KLGIELHELSVAHGYDSNIKVQNALISMYG 333
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ + +A +F ++ DVV+W+ LI+ T+HG N A L++ M + ++ +S
Sbjct: 334 KCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTS 393
Query: 428 VLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
VL CS + L G+ +HA + R GF + + + +LI+MY+KCG +D +F+ +
Sbjct: 394 VLSACSNTSDLELGQALHARLLARKDGF-SDGVLVAALINMYVKCGRLDLSSEIFQSCKD 452
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+ VV W +I Q G ++ A+ + M Q L P+E T +LSAC
Sbjct: 453 TKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSAC 501
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 205/429 (47%), Gaps = 34/429 (7%)
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L GR IH I L D L + LL MY KCGS+ + +S S + WN
Sbjct: 2 LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFS----WNF 57
Query: 181 MLS-------GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+++ G K + F G + + TL+S++ ++++G + + R
Sbjct: 58 IIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARG 117
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ S S +ALV MY+ C+ L AR +FD+ S +V WN+MI
Sbjct: 118 LSS-----------SIIVQNALVSMYARCSRLDVARVVFDKIES------KSVVSWNAMI 160
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+ + E+A+ L + + + TF S AC +LL + ++H I S
Sbjct: 161 AACARQGEAEQALQLFKRME---LEPNEVTFASVFNAC-SLLPDHREVGKRIHDRIRGSH 216
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E + V + ++ +Y + G V A ++F+ + K+VV+W+ ++ T++ L+ A ++
Sbjct: 217 LEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYH 276
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+M+ ++ + L + + L L+ G ++H V G++ +LI MY KC
Sbjct: 277 EMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCN 336
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
E+D +F + DVVSWT +IV Q+GR +EA+ +++M ++P+++TF VLS
Sbjct: 337 ELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLS 396
Query: 532 ACRHAGLVE 540
AC + +E
Sbjct: 397 ACSNTSDLE 405
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
++H IV SG D +G +L+ +Y + G+V A+++FH LP++ + +W+ +I K+
Sbjct: 7 RIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNR 66
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
A +FR M ++ + +SSVL CS L L GK++H+ + RG I
Sbjct: 67 HGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQN 126
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+ MY +C +D +F + + VVSW +I C + G A++A+ F+ M L+P
Sbjct: 127 ALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM---ELEP 183
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
NE+TF V +AC E LE ++ +V + G+ G A Q+
Sbjct: 184 NEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQV 243
Query: 582 IAEMPFKPDKTIWASMLKACETHNN 606
+ K + W +ML A T NN
Sbjct: 244 FNGIQHK-NVVSWNAMLGAY-TQNN 266
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+L +G+++HA V G + L+ MY KCG +DD + +F +P R + SW II
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
+N ++AI F+ M + +KP+ T VL AC +EE I S GL
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIH-SRALARGLS 119
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
+ +V + + D A + ++ K + W +M+ AC + A Q
Sbjct: 120 SSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVS-WNAMIAACARQGEAEQ----ALQ 174
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAG 660
L +P++ V ++V+ + L R+ GK++ ++ G
Sbjct: 175 LFKRMELEPNE-VTFASVFNACSL---LPDHREVGKRIHDRIRG 214
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 281/521 (53%), Gaps = 57/521 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L GK+VH G ++ L++ LI+MY KCG+ + +F+ M R++ SW ++
Sbjct: 75 LREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLS 134
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y+ ++ ARKLFD+ +V WN+M+ +
Sbjct: 135 G---------------YAKLGMIKPARKLFDKMPE------KDVVSWNTMVIAHAQCGYW 173
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EA+ S G+ + ++F L C+ L QVHG I+ +G+ + ++ S
Sbjct: 174 DEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVG--LTRQVHGQILVAGFLSNVVLSS 231
Query: 361 NLIDLY-------------------------------ARLGNVKSALELFHRLPKKDVVA 389
+++D Y A+ G++KSA ELF +P+K+ V+
Sbjct: 232 SVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVS 291
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G ++G+ A LF M+ + +QF SS L C+ +ASL+ GKQ+HA+ +
Sbjct: 292 WTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLL 351
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAI 508
+ F+ I +++LIDMY KCG + G +F M + DVV W II Q+G +EAI
Sbjct: 352 RINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAI 411
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+M++S KP++ITF+ +L+AC H+GLV++ F SM +YG+ P EHY C++DL
Sbjct: 412 QMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDL 471
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF++ + +MP+KPD +W ++L C H + +L AE+L+ P+ + Y
Sbjct: 472 LGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAY 531
Query: 629 VMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
V+LS++YA LG W+S+ KVR+ ++ +K+ +SW+E+ +
Sbjct: 532 VLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIEN 572
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 243/574 (42%), Gaps = 116/574 (20%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-------------------------- 34
+D R + L+HC R++++GK +H + GL
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 35 ------SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA 88
++++++ NN+LS YA + A KLFD+M K++VSW TMV A+ + A
Sbjct: 117 VFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEA 176
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
+R Y+ + G ++ NGF ++ VL C ++ L R +H +I + VL +++LD
Sbjct: 177 LRFYSEFRQLG-IQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLD 235
Query: 149 MYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAFCVKRGFEKE 200
YVKCG + RKLFD+ S +V W +M+SG K + V+ EK
Sbjct: 236 AYVKCGLMGDARKLFDEMSA------RDVLAWTTMVSGYAKWGDMKSANELFVEMP-EKN 288
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFN----FMPERDVVSWTGIIVGC-------------- 242
V+ T+LI Y + G L LF F D +++ + C
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHA 348
Query: 243 ------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
F+ + +SAL+DMYS C L RK+FD + +V LWN++IS
Sbjct: 349 YLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKL-----DVVLWNTIISALAQ 403
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ EEAI +L + SG D TF L AC S L GL DY
Sbjct: 404 HGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC-------SHSGLVQQGLNFFESMSCDY 456
Query: 357 -IVGSN-----LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG-------- 401
IV S LIDL R G + ++ ++P K D W+ L+ C HG
Sbjct: 457 GIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKA 516
Query: 402 ---------LNSLAYLLFRDMI------NSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+S AY+L + S Q V Q + +K ++ L +VH+
Sbjct: 517 AERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHS 576
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
F V + S+++ G++++ +LF
Sbjct: 577 FSVSDSSHPLKEQIYSVLEQL--AGQMEEDASLF 608
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 167/401 (41%), Gaps = 63/401 (15%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH----GLIVTSGYELDYI 357
EA++ L ++ G+ +DS T S L+ C + + +H GL + +++
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 358 VG--------------------------SNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ +N++ YA+LG +K A +LF ++P+KDVV+W+
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+++ + G A + + N F + VL VC L + +QVH +
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFK------------------------------ 481
GF + +S++D Y+KCG + D LF
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELF 281
Query: 482 -FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MPE++ VSWT +I G +NG +A+ F +M+ ++P++ TF L AC ++
Sbjct: 282 VEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I + +P+ ++D+ + G ++ M K D +W +++ A
Sbjct: 342 HGKQIHAYLL-RINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISA 400
Query: 601 CETHN-NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
H + + ++ + + + + D +V++ N + G+
Sbjct: 401 LAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGL 441
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 48/297 (16%)
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
R P++ ++ C K+ LN A ++ ++ ++S+L+ C+ +LR
Sbjct: 19 RKPRRRPCLVEAIVKLCKKNKLNE-AVSSLENLARRGLRLDSRTLASLLQHCADSRALRE 77
Query: 441 GKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGE--------------------------- 472
GK+VH G ++ L++ LI+MY KCG+
Sbjct: 78 GKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYA 137
Query: 473 ----IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
I LF MPE+DVVSW +++ Q G EA+ ++ E Q ++ N +F G
Sbjct: 138 KLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAG 197
Query: 529 VLSAC---RHAGLVEEAW-TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
VL+ C + GL + I + G ++ ++D + G DA +L E
Sbjct: 198 VLTVCVKLKEVGLTRQVHGQILVA-----GFLSNVVLSSSVLDAYVKCGLMGDARKLFDE 252
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPSKYVMLSNVYATLGM 640
M + D W +M+ + K A +L PE +P + L + YA GM
Sbjct: 253 MSAR-DVLAWTTMVSGYAKWGDMK----SANELFVEMPEKNPVSWTALISGYARNGM 304
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 196/665 (29%), Positives = 325/665 (48%), Gaps = 42/665 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + + I K GL Q+ L+S++ + S+++A ++F+ + +K V + TM+
Sbjct: 49 SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLK 108
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ + A++ + M + VEP + ++ +LK C +L +G+ IH + +
Sbjct: 109 GFAKVSDLDKALKFFVRMRD-DEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------- 187
D M L +MY KC + RK+FD+ ++ WN++++G Q
Sbjct: 168 LDLFAMTGLENMYAKCRQVHEARKVFDRMPER------DLVSWNTIVAGYSQNGMARMAL 221
Query: 188 --VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V+ C + + +T+ S++ I G + + S I
Sbjct: 222 EMVNLMC-EENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIA------ 274
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALVDMY+ C L AR LFD NV WNSMI YV NE +EA+
Sbjct: 275 -----TALVDMYAKCGSLKTARLLFD------GMLERNVVSWNSMIDAYVQNENPKEAMV 323
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ + AL AC +L + RF +H L V + + V ++LI
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF---IHKLSVELELDRNVSVVNSLIS 380
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + V +A +F +L + +V+W+ +I+G ++G A F M + F
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFT 440
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
SV+ + L+ K +H ++ +K T+L+DMY KCG I +F M
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ER V +W +I G G +G K A+ F+EM + ++PN +TFL V+SAC H+GLVE
Sbjct: 501 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLK 560
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F MK Y +EP ++HY MVDLLG+AG ++A I +MP KP ++ +ML AC+ H
Sbjct: 561 CFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N +AE+L +PED +V+L+N+Y MW+ + +VR + + G K G S
Sbjct: 621 KNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 664 IEVSS 668
+E+ +
Sbjct: 681 VEIKN 685
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 214/538 (39%), Gaps = 108/538 (20%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG ++ GK +H ++K G S D+F L +MYA +++A K+FD M +++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDL 201
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T+V Y+ N A+ + N M E +++P+ +VL A S + +G+ IH
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVNLMCE-ENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM------ 181
R + + L+DMY KCGSL R LFD NV WNSM
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFD------GMLERNVVSWNSMIDAYVQ 314
Query: 182 --------------------------------------LSGGKQVHAFCVKRGFEKEDVT 203
L G+ +H V+ ++
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSV 374
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ SLI MY KC E+D ++F + R +VSW +I+G
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILG---------------------- 412
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ N + EA+ S + + + D++T+
Sbjct: 413 ------------------------------FAQNGRPIEALNYFSQMQARTVKPDTFTYV 442
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S + A L + A +HG+++ + + + V + L+D+YA+ G + A +F +
Sbjct: 443 SVITAIAEL--SITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-K 442
++ V W+ +I G HG+ A LF +M N SV+ CS + G K
Sbjct: 501 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLK 560
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
H E +++D+ + G +++ MP + V+ G ++G Q
Sbjct: 561 CFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 175/447 (39%), Gaps = 117/447 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L R I+ GK +H ++ G + L+ MYA SL A LFD M
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGML 298
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSW +M+ AY N+ P A+ ++ ML+ G V+P L AC+ GDL+ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG-VKPTDVSVMGALHACADLGDLERGR 357
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-----NVALWNS 180
IH+ +L+ + ++N+L+ MY KC + + AAS +G + WN+
Sbjct: 358 FIHKLSVELELDRNVSVVNSLISMYCKCKEV---------DTAASMFGKLQSRTIVSWNA 408
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
M+ G K +H ++
Sbjct: 409 MILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNC 468
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+K T+L+DMY KCG I +F+ M ER V +W +A++D
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW---------------NAMIDG 513
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y + A +LF++ G +T LS I + C
Sbjct: 514 YGTHGIGKAALELFEEMQKGTIRPNG---------------------VTFLSVISA---C 549
Query: 317 IDSYTFTSALKACINLL--NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
S + LK C +++ N++ ++ +G +V DL R G +
Sbjct: 550 SHSGLVEAGLK-CFHMMKENYSIEPSMDHYGAMV---------------DLLGRAGRLNE 593
Query: 375 ALELFHRLPKKDVVAWSGLIMG-CTKH 400
A + ++P K V G ++G C H
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIH 620
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 216/731 (29%), Positives = 341/731 (46%), Gaps = 120/731 (16%)
Query: 13 CGQRRSIKQGKSLHCRI--IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
C ++ GK++H +I + D N+L++MY SL DA ++F + RKN
Sbjct: 138 CCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAF 197
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH-- 128
SWT M+TAY N AI ++ M+ G VEP+ Y+ VL ACS GDL+ G IH
Sbjct: 198 SWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHAL 257
Query: 129 -ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ--------------------YS 165
RI LEYD VL + +L ++ +CGSL TR++FD+ YS
Sbjct: 258 IHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYS 317
Query: 166 NWAASAY-------GNVALWNSM--------LSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
A Y ++AL N + L G+ VH+ R FE + T L+DM
Sbjct: 318 MEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDM 377
Query: 211 YLKCGEIDDGLALFNFMPERDVV-----------------------------------SW 235
Y+KCG++ + F+ RDV+ ++
Sbjct: 378 YVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITF 437
Query: 236 TGIIVGCFECSC--------------------FTLSALVDMYSNCNVLCEARKLFDQYSS 275
+I C S F +ALV MYS + AR +FD S
Sbjct: 438 CTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFD---S 494
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
Y + W M+ N + EA+ + S IH G S F++AL +C L +
Sbjct: 495 IPVKRYPS---WRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDV 551
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+ A +HG+I +S + D ++ + L+++YA+ G ++ A +F ++ +K+ V+W+ +I
Sbjct: 552 SR--ARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIG 609
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC--LASLRRGKQVHAFCVKRGF 453
G ++G + A L++ M DV I+ V + SC L +L G++VHA G
Sbjct: 610 GYAQNGRPAEALELYKAM-----DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGL 664
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ ++ +T+L++MY KCG++ F D +W + Q G + + ++E
Sbjct: 665 QNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYRE 724
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M ++PN IT L VL AC H G++EE F M ++G+ P EHY CM DLLG++G
Sbjct: 725 MCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSG 784
Query: 574 CFDDAEQLI--------AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
++AE+++ +E + W S L AC+THN+ + AE+L PED
Sbjct: 785 RLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDS 844
Query: 626 SKYVMLSNVYA 636
+ YV+LS Y+
Sbjct: 845 APYVLLSQTYS 855
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 170/689 (24%), Positives = 300/689 (43%), Gaps = 115/689 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++GK +H RI + D N LL++YA L ++ ++F+ M R+ +
Sbjct: 37 LSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTV 96
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W TM+TAY + A+ + M P+ +++VL AC DL+ G+ IH
Sbjct: 97 ATWNTMITAYVQHDFFQEALEAFRRM----DAPPSSITFTSVLGACCSPDDLETGKAIHR 152
Query: 130 RI--TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYGN---- 174
+I + +++ D +L N+L+ MY KCGSL ++F +W A +AY
Sbjct: 153 QIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYE 212
Query: 175 ---VALWNSMLSGGK-------------------------QVHAFCVK---RGFEKEDVT 203
+ ++ M+S G+ ++HA + G E +DV
Sbjct: 213 RRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVL 272
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFEC------ 245
++ ++ +CG + +F+ MP R VV+WT +I + C
Sbjct: 273 QDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPD 332
Query: 246 ----------------------------------SCFTLSALVDMYSNCNVLCEARKLFD 271
S + LVDMY C L EAR+ FD
Sbjct: 333 DIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFD 392
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + +V W S+I+ Y EA+ + + G+ +S TF + + AC
Sbjct: 393 GFKAR------DVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSR 446
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + AL H +V +G+ D VG+ L+ +Y++ G V A +F +P K +W
Sbjct: 447 LSSLLPGRAL--HSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWR 504
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+++ T++G + A ++ + I S+ L C+ L + R + +H
Sbjct: 505 VMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSS 564
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
F + + L+++Y KCGE++ +F M E++ VSWT +I G QNGR EA+ +
Sbjct: 565 DFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY 624
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+ M ++PN I F+ V+S+C G + E + + + GL+ + +V++ +
Sbjct: 625 KAM---DVQPNFIAFVPVISSCADLGALVEGQRVHARLS-DAGLQNNEVIVTALVNMYAK 680
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
G A + + + PD W SM A
Sbjct: 681 CGKLGLAREFF-DSTYCPDAGAWNSMATA 708
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 225/472 (47%), Gaps = 41/472 (8%)
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M++AY A+ LY M E G V+PN ++ VL AC+ D++ G+ +H RI
Sbjct: 1 MISAYAQKGYHREALELYEEMDERG-VDPNDKTFACVLSACAGLKDMERGKKVHRRIRES 59
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
DTVL N LL++Y KCG L +R++F+ A VA WN+M++ Q H F
Sbjct: 60 VARVDTVLQNALLNLYAKCGDLEESRRIFE------AMERRTVATWNTMITAYVQ-HDFF 112
Query: 193 VK--RGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ F + D +T TS++ +++ G A+ R + + I +
Sbjct: 113 QEALEAFRRMDAPPSSITFTSVLGACCSPDDLETGKAI-----HRQIGGSSPQI----QA 163
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++LV MY C L +A ++F N W +MI+ Y N AI
Sbjct: 164 DEILQNSLVTMYGKCGSLEDAERVFHGIRR------KNAFSWTAMITAYAQNGYERRAIE 217
Query: 306 LLSHIHSSGMC-IDSYTFTSALKACINLLNFNSRFALQVHGL---IVTSGYELDYIVGSN 361
+ + S G D T+ L AC L + + +++H L I T G E D ++
Sbjct: 218 VFGDMMSEGRVEPDPITYAGVLTACSTLGDLET--GMRIHALIHRIYTLGLEYDDVLQDG 275
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
++ L+AR G++ E+F R+P + VV W+ +I + G + A L+ M D+
Sbjct: 276 ILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDI- 334
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+S+VL+ CS L +L +G+ VH+ R FE + T L+DMY+KCG++ + F
Sbjct: 335 --ALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFD 392
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
RDV+SWT +I +EA+ F M ++PN ITF V+ AC
Sbjct: 393 GFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDAC 444
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 24/292 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + + +++H I D+ N L+++YA L A +FD+M KN
Sbjct: 541 ALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKN 600
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSWTTM+ Y N RP A+ LY M V+PN + V+ +C+ G L G+ +H
Sbjct: 601 EVSWTTMIGGYAQNGRPAEALELYKAM----DVQPNFIAFVPVISSCADLGALVEGQRVH 656
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
R++ L+ + V++ L++MY KCG L R+ FD A A+ ++A + G
Sbjct: 657 ARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGS 716
Query: 187 QV----HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
QV C++ G + +TL S++ G +++ F M V+ GI
Sbjct: 717 QVLELYREMCLQ-GVQPNGITLLSVLVACSHMGMLEECEHRFECM-----VADHGIAPTS 770
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN---VALWNSMI 291
SC T D+ L EA K+ S + S + V+ W S +
Sbjct: 771 EHYSCMT-----DLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFL 817
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 13/253 (5%)
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I + G + A L+ +M D N + VL C+ L + RGK+VH ++
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRR-IRES 59
Query: 453 FEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+ D L +L+++Y KCG++++ +F+ M R V +W +I Q+ +EA+ F
Sbjct: 60 VARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM---KPEYGLEPHLEHYYCMVDL 568
+ M P+ ITF VL AC +E I + P+ + L++ +V +
Sbjct: 120 RRM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQN--SLVTM 174
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPE-DPS 626
G+ G +DAE++ + K + W +M+ A + + + + + + E DP
Sbjct: 175 YGKCGSLEDAERVFHGIRRK-NAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPI 233
Query: 627 KYVMLSNVYATLG 639
Y + +TLG
Sbjct: 234 TYAGVLTACSTLG 246
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V + C ++ +G+ +H R+ GL + L++MYA L A + FD
Sbjct: 636 FVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTY 695
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ +W +M TAY + + LY M G V+PNG +VL ACS G L+
Sbjct: 696 CPDAGAWNSMATAYAQFGHGSQVLELYREMCLQG-VQPNGITLLSVLVACSHMGMLE 751
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/613 (31%), Positives = 312/613 (50%), Gaps = 42/613 (6%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R+N +WT M+ ++ R + A+ L+ ML G P+ + VL D+G
Sbjct: 99 RRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNV----PGCDVGT 154
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
L H +T+ V+ NTLLD Y K G + R++F + + + Y N+M+
Sbjct: 155 L-HPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITY------NAMIM 207
Query: 184 G-------GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G G+ + F R G + T +SL+ + ++ G + +
Sbjct: 208 GCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANP-- 265
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
C+ F +AL+D YS C+ L + ++LFD+ S NV+ +N MIS
Sbjct: 266 ---------SCNVFVNNALLDFYSKCDSLGDLKQLFDEMSE-----RDNVS-YNVMISAC 310
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N A+ L + + G + + S L L + + Q+H ++ G L
Sbjct: 311 SWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHI--KIGRQIHAQLILHGLTL 368
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ VG+ LID+Y++ G + +A +F K ++W+ LI GC ++G N A LF DM
Sbjct: 369 EDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMR 428
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ ++ SS++K S LA + G+Q+HA+ K G + ++L+DMY KCG +D
Sbjct: 429 RAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLD 488
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ + F MPE++ ++W +I Q G+AK AI F M+ L P+ +TFL VL+AC
Sbjct: 489 EAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACG 548
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H GL EE F M+ Y + P EHY C++D LG+AGCFD +++I EMPF+ D IW
Sbjct: 549 HNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIW 608
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
+S+L +C + N L ++ AE+L P D + YV+LSN+YA G W+ ++V+K +
Sbjct: 609 SSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDR 668
Query: 655 GEKK-AGMSWIEV 666
G KK +G SW+E+
Sbjct: 669 GVKKESGNSWVEI 681
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 171/436 (39%), Gaps = 115/436 (26%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++ S ++F N LL Y+ SL D +LFDEM+ ++ VS+ M++A +
Sbjct: 253 GRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSW 312
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N+ A++L+ M G + Y+++L + +GR IH ++ L +
Sbjct: 313 NRCGGMALQLFRDMQTLG-FDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDF 371
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N L+DMY KCG L + +F S+ A + W ++++G
Sbjct: 372 VGNALIDMYSKCGMLDAAKTIFAYKSDKTAIS------WTALITGCVQNGQNEEALQLFC 425
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
G+Q+HA+ K G + ++L+DMY KCG
Sbjct: 426 DMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCG 485
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+D+ + FN MPE++ ++W +I
Sbjct: 486 CLDEAIRTFNEMPEKNSITWNAVI------------------------------------ 509
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
S Y Q + AI + + G+C D TF S L AC + N
Sbjct: 510 ----------------SAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGH--NG 551
Query: 336 NSRFALQVHGLI----VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
+ ++ L+ S ++ Y S +ID R G ++ +P + D + W
Sbjct: 552 LAEECMKYFDLMRYYYSMSPWKEHY---SCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIW 608
Query: 391 SGLIMGCTKHGLNSLA 406
S ++ C +G LA
Sbjct: 609 SSILHSCRIYGNQDLA 624
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G IK G+ +H ++I +GL+ + F GN L+ MY+ L+ A +F + K +SWT
Sbjct: 346 GALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWT 405
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
++T N + A++L+ M G + P+ S+++K+ S + +GR +H +T+
Sbjct: 406 ALITGCVQNGQNEEALQLFCDMRRAG-LSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTK 464
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
+ LLDMY KCG L + F++ N WN+++S Q
Sbjct: 465 SGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPE------KNSITWNAVISAYAQY--- 515
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G K + + D L CG D + + +
Sbjct: 516 ----GQAKNAI---RMFDSMLHCGLCPDPVTFLSVL 544
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 198/680 (29%), Positives = 332/680 (48%), Gaps = 62/680 (9%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
R +V L C ++ G+ +H ++ G+ + L+ Y F + LFD
Sbjct: 162 RTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFD 220
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +NIVSW M++ Y A+ L+ ML V+ + ++AC+ G L
Sbjct: 221 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDEVKFDCVTMLVAVQACAELGSLK 279
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LG+ IH+ + + D ++N LL+MY GSL + +LF+ N A LWNS
Sbjct: 280 LGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA------PLWNS 333
Query: 181 MLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M+S G A + G +K++ T+ ++ M C E+ GL +
Sbjct: 334 MISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM---CEELASGLLKGKSLHAH- 389
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+I +AL+ MY+ N + +K+FD+ ++ WN+MI
Sbjct: 390 ------VIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGV------DIISWNTMI 437
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
N +A L + S + +SYT S L AC ++ + F +HG ++
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD--FGRSIHGYVMKHS 495
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E++ + + L D+Y G+ +A +LF P +D+++W+ +I
Sbjct: 496 IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI----------------- 538
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-KEDITLT-SLIDMYLK 469
+ N I +VL + LA+L +G+ +HA+ +RGF D++L + I MY +
Sbjct: 539 ----XKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 594
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + +FK +P+R+++SW +I G G NGR +A+ F +M++ +PN +TF+ V
Sbjct: 595 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 654
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H+G +E +F SM ++ + P L HY C+VDLL + GC D+A + I MP +P
Sbjct: 655 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 714
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D ++W ++L +C +++ K I E+L P + YV+LSNVYAT G+W + ++R
Sbjct: 715 DASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRT 774
Query: 650 AGKKLG-EKKAGMSWIEVSS 668
K+ G K G+SWI V +
Sbjct: 775 WLKEKGLRKPPGISWIIVKN 794
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 153/632 (24%), Positives = 253/632 (40%), Gaps = 134/632 (21%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ W +++ + K + Y M G V PN VLKAC+ ++ G+
Sbjct: 23 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLG-VLPNNTTLPLVLKACAAQNAVERGKS 81
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALWN 179
IH I L D + ++D Y KCG + R +FD S+ W A YG V W
Sbjct: 82 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG-WG 140
Query: 180 ----------------------------------SMLSGGKQVHAFCVKRG-FEKEDVTL 204
S L G+ VH +C++ G F+
Sbjct: 141 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 200
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------- 245
T+LI YL+ ++ LF+ M R++VSW +I G ++
Sbjct: 201 TALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK 259
Query: 246 -SCFT-----------------------------------LSALVDMYSNCNVLCEARKL 269
C T L+AL++MYSN L + +L
Sbjct: 260 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 319
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F+ + A LWNSMIS Y +EEA+ L + S G+ D T L C
Sbjct: 320 FESVPNRDA------PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 373
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + + +H ++ SG +D +G+ L+ +Y L V+S ++F R+ D+++
Sbjct: 374 EELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 432
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I+ ++ L + A LF M S N + I S+L C + L G+ +H + +
Sbjct: 433 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 492
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K E T+L DMY+ CG+ LF+ P+RD++SW +I
Sbjct: 493 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI-------------- 538
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI---FTSMKPEYGLEPHLEHYYCMV 566
+ +PN +T + VLS+ H + + ++ T GL+ L + + +
Sbjct: 539 -------XKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF--I 589
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + G AE + +P K + W +M+
Sbjct: 590 TMYARCGSLQSAENIFKTLP-KRNIISWNAMI 620
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 16/320 (5%)
Query: 287 WNSMISGYVLNEQNEEAI-TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WNS+I + N +N++AI + + + S G+ ++ T LKAC N R +H
Sbjct: 28 WNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ-NAVER-GKSIHR 84
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
I + D VG+ ++D Y + G V+ A +F + +DVV W+ ++ G G
Sbjct: 85 SIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEE 144
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG-FEKEDITLTSLI 464
A LL R+M N N + ++L C + LR G+ VH +C++ G F+ T+LI
Sbjct: 145 AMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALI 204
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
YL+ ++ LF M R++VSW +I G G +A+ F +M+ +K + +
Sbjct: 205 GFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCV 263
Query: 525 TFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYY---CMVDLLGQAGCFDDAEQ 580
T L + AC G ++ I ++K E+ +E Y ++++ G + + Q
Sbjct: 264 TMLVAVQACAELGSLKLGKQIHQLAIKFEF-----VEDLYILNALLNMYSNNGSLESSHQ 318
Query: 581 LIAEMPFKPDKTIWASMLKA 600
L +P + D +W SM+ A
Sbjct: 319 LFESVPNR-DAPLWNSMISA 337
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/594 (29%), Positives = 305/594 (51%), Gaps = 67/594 (11%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
P+ + V++AC +L +GRLIH + + L+ D + L+DMYVKC + R
Sbjct: 27 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LFD+ E++ VT T +I Y +CG+ ++
Sbjct: 87 LFDKMQ--------------------------------ERDLVTWTVMIGGYAECGKANE 114
Query: 220 GLALFNFMPER----DVVSWTGIIVGC--------------------FECSCFTLSALVD 255
L LF M E D V+ ++ C F+ +A++D
Sbjct: 115 SLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMID 174
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MY+ C + AR++FD+ NV W++MI+ Y + Q +A+ L + SSGM
Sbjct: 175 MYAKCGCVESAREIFDRMEE------KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 228
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D T S L AC +L N + +H ++ G +LD+ V + L+D+Y + ++ A
Sbjct: 229 LPDKITLASLLYACSDLKNL--QMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDA 286
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
LF ++P++D+V W+ +I G + G + + +LF M ++ + +V+ C+ L
Sbjct: 287 RFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 346
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
++ + + + + ++ F+ + I T++IDM+ KCG ++ +F M E++V+SW+ +I
Sbjct: 347 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 406
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G +G+ ++A+ F M++S + PN+IT + +L AC HAGLVEE F+ M +Y +
Sbjct: 407 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSV 466
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
++HY C+VDLLG+AG D+A +LI M + D+ +W + L AC TH + L A
Sbjct: 467 RADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAAT 526
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
LL P++P Y++LSN+YA G W+ ++K R ++ +K G +WIEV +
Sbjct: 527 SLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDN 580
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 211/493 (42%), Gaps = 116/493 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R C ++++ G+ +H + K+GL D F L+ MY + DA LFD+M +++
Sbjct: 37 IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDL 96
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+WT M+ Y + N ++ L+ M E G V P+ V+ AC+ G + R+I +
Sbjct: 97 VTWTVMIGGYAECGKANESLVLFEKMREEGVV-PDKVAMVTVVFACAKLGAMHKARIIDD 155
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYG------- 173
I R+K + D +L ++DMY KCG + R++FD+ +W+A +AYG
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215
Query: 174 NVALWNSMLSG------------------------GKQVHAFCVKRGFEKEDVTLTSLID 209
+ L+ MLS G+ +H K G + + +L+D
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 275
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------------ 245
MY KC EI+D LF+ MPERD+V+WT +I G EC
Sbjct: 276 MYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 335
Query: 246 ------SCFTLSA-------------------------LVDMYSNCNVLCEARKLFDQYS 274
+C L A ++DM++ C + AR++FD+
Sbjct: 336 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 395
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
NV W++MI+ Y + Q +A+ L + SG+ + T S L AC
Sbjct: 396 E------KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC----- 444
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDV 387
S L GL S DY V ++ ++DL R G + AL+L + +KD
Sbjct: 445 --SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502
Query: 388 VAWSGLIMGCTKH 400
W + C H
Sbjct: 503 GLWGAFLGACRTH 515
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 40/325 (12%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++++ G+ +H + K+GL D F L+ MY + DA LFD+M +++V+W
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T M+ Y N ++ L++ M E G V P+ V+ AC+ G + R I + I
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVV-PDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS------- 183
R+K + D +L ++DM+ KCG + R++FD+ NV W++M++
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE------KNVISWSAMIAAYGYHGQ 414
Query: 184 GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
G K + F ++ G +TL SL+ G +++GL F+ M E V V
Sbjct: 415 GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD---VK 471
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------WAA-----SAYGNVALWNSM 290
+ C +VD+ L EA KL + + W A + +V L
Sbjct: 472 HYTC-------VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKA 524
Query: 291 ISGYV-LNEQNEEAITLLSHIHSSG 314
+ + L QN LLS+I+++
Sbjct: 525 ATSLLELQPQNPGHYILLSNIYANA 549
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 5/228 (2%)
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
FR++I + + + V++ C L +L+ G+ +H K G + + +L+DMY+K
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
C EI+D LF M ERD+V+WT +I G + G+A E++ F++M + + P+++ + V
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 530 LSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+ AC G + +A I + + ++ L+ L M+D+ + GC + A ++ M K
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCVESAREIFDRMEEK 195
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+ W++M+ A H + + +L +S P K + S +YA
Sbjct: 196 -NVISWSAMIAAYGYHGQGRKALDLFRMML-SSGMLPDKITLASLLYA 241
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 307/611 (50%), Gaps = 67/611 (10%)
Query: 99 GSVEPNGF---MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G V P+ F Y+ L+ C + G+ +H I + D N LL+MYVK
Sbjct: 29 GHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDF 88
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV-----KRGFEKEDVTLTSLI 208
L KLFD+ ++ V L + + A + + G E T+++
Sbjct: 89 LCDASKLFDEMPERNTISF--VTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTIL 146
Query: 209 DMYLK--CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+ + CGE+ G+ F E + F +AL+D YS C + A
Sbjct: 147 KLLVSTDCGELGWGIHACIFKLGH-------------ESNAFVGTALIDAYSVCGRVDVA 193
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R++FD Y ++ W M++ + N+ +EA+ L S + G +++TF S
Sbjct: 194 REVFD------GILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
KAC+ L F+ VHG + S YELD VG L+DLY + G++ A F +PKKD
Sbjct: 248 KACLGLEAFD--VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKD 305
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V+ WS +I + + A +F M + NQF +SVL+ C+ + L G Q+H
Sbjct: 306 VIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHC 365
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K G + +L+D+Y KCG +++ + LF P R+ V+W +IVG Q G ++
Sbjct: 366 HVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEK 425
Query: 507 AIAYFQEMIQSRL-------------------------------KPNEITFLGVLSACRH 535
A+ F M++ R+ KP+++TF+GVLSAC +
Sbjct: 426 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACAN 485
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGL+++ FTSM ++G+EP +EHY CMV LLG+ G D A +LI E+PF+P +W
Sbjct: 486 AGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWR 545
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC HN+ +L I A+++L P+D + +V+LSN+YAT WD+++ VRK K+ G
Sbjct: 546 ALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKG 605
Query: 656 EKK-AGMSWIE 665
KK G+SWIE
Sbjct: 606 VKKEPGLSWIE 616
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 246/427 (57%), Gaps = 15/427 (3%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+E F ++ L++MY +L EAR LFD+ NV W +MIS Y + N +
Sbjct: 47 YEPKTFLINTLINMYVKFGLLDEARNLFDEMPD------RNVVSWTTMISAYSNSNLNHK 100
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + G+ + YT++S L+AC LLN Q+HG I+ G E D V S L
Sbjct: 101 ALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR-----QLHGSILKVGLESDVFVRSAL 155
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID Y++LG AL +F+ + D+V W+ +I G ++ L++ M ++ +Q
Sbjct: 156 IDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF-K 481
++SVL+ C+ LA L G+QVH +K ++++ I +L+DMY KCG ++D LF +
Sbjct: 216 STLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTR 273
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M E+DV+SW+ +I G QNG + +A+ F+ M KPN IT LGVL AC HAGLV +
Sbjct: 274 MMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVND 333
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
W F SMK +G++P EHY C++DLLG+AG D+A +LI EM +PD W +L AC
Sbjct: 334 GWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGAC 393
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
H N L A+++L P D Y++LSN+YA W+ +++VR+ + G KK G
Sbjct: 394 RVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPG 453
Query: 661 MSWIEVS 667
SWIEVS
Sbjct: 454 CSWIEVS 460
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 135/544 (24%), Positives = 226/544 (41%), Gaps = 142/544 (26%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E ++ C R +++Q + +H + G F N L++MY F L++A LFDEM +
Sbjct: 21 ELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDR 80
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VSWTTM++AY+++ + A+ ML G V PN + YS+VL+AC G L+L R +
Sbjct: 81 NVVSWTTMISAYSNSNLNHKALDFLILMLREG-VRPNMYTYSSVLRAC--DGLLNL-RQL 136
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H I + LE D + + L+D Y K G + D + + G++ +WNS++ G
Sbjct: 137 HGSILKVGLESDVFVRSALIDTYSKLG----EQHDALNVFNEMITGDLVVWNSIIGGFAQ 192
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+QVH +K ++++ +
Sbjct: 193 NSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLIL 250
Query: 204 LTSLIDMYLKCGEIDDGLALFN-FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+DMY KCG ++D LF M E+DV+SW+ +I G + + F+ AL
Sbjct: 251 NNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ-NGFSADAL--------- 300
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS---SGMCIDS 319
KLF+ S IT+L + + +G+ D
Sbjct: 301 -----KLFEAMKSKGPKP---------------------NYITILGVLFACSHAGLVNDG 334
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+ + ++K +F + +G I IDL R G + A++L
Sbjct: 335 WYYFQSMKE-----HFGIDPGREHYGCI---------------IDLLGRAGKLDEAVKLI 374
Query: 380 HRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSC--- 434
H + + D V W L+ C H LA ++++ + D +I+ S + S
Sbjct: 375 HEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWE 434
Query: 435 -LASLRR------------------GKQVHAFCVKRG----FEKEDITLTSLIDMYLKCG 471
+A +RR KQVHAF + E+ L+ LI ++ G
Sbjct: 435 DVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLG 494
Query: 472 EIDD 475
+ D
Sbjct: 495 YVPD 498
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 184/462 (39%), Gaps = 106/462 (22%)
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF 161
+ YS ++K C + G + RL+HE + E T L+NTL++MYVK G L R LF
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74
Query: 162 DQYSN-----WAA--SAYGNVALWNS-------MLSGG---------------------K 186
D+ + W SAY N L + ML G +
Sbjct: 75 DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR 134
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
Q+H +K G E + ++LID Y K GE D L +FN M D+V W II G
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGG----- 189
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ N +E + L
Sbjct: 190 -----------------------------------------------FAQNSDGDETLHL 202
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ + D T TS L+AC L + VH L Y+ D I+ + L+D+Y
Sbjct: 203 YKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL----KYDQDLILNNALLDMY 258
Query: 367 ARLGNVKSALELFHR-LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
+ G+++ A LF R + +KDV++WS +I G ++G ++ A LF M + N I
Sbjct: 259 CKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITI 318
Query: 426 SSVLKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
VL CS + G F + G E +ID+ + G++D+ + L
Sbjct: 319 LGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREH----YGCIIDLLGRAGKLDEAVKLI 374
Query: 481 KFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
M E D V+W ++ C + AI +E++ +L P
Sbjct: 375 HEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL--KLDP 414
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K C ++++ + VH G+E + + +LI+MY+K G +D+ LF MP+
Sbjct: 20 SELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPD 79
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+VVSWT +I + +A+ + M++ ++PN T+ VL AC GL+
Sbjct: 80 RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC--DGLLNLRQLH 137
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ +K GLE + ++D + G DA + EM D +W S++
Sbjct: 138 GSILK--VGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVVWNSII 187
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + LR C ++ G+ +H ++KY QD+ N LL MY SL DA+ LF
Sbjct: 214 DQSTLTSVLRACTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANLLF 271
Query: 62 DE-MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
M K+++SW+TM+ N A++L+ M G +PN VL ACS +G
Sbjct: 272 TRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP-KPNYITILGVLFACSHAGL 330
Query: 121 LDLG 124
++ G
Sbjct: 331 VNDG 334
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 264/487 (54%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G Q+H +K G+E + TSLI MY++ ++D +F+ RDVVS+T ++ G
Sbjct: 82 GLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG--- 138
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + AR +FD+ +V WN+MISGYV +EA+
Sbjct: 139 ------------YASRGYIESARNMFDEI------PVKDVVSWNAMISGYVETGNYKEAL 180
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + A + + QVH I G+ + + + LID
Sbjct: 181 ELFKEMMKTNVRPDESTMVTVISASAR--SGSIELGRQVHSWIADHGFGSNLKIVNALID 238
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
Y++ G +++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 239 FYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVT 298
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 299 MLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNS 358
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M + + +W +I G +GRA A F M ++ +KP++ITF+G+LSAC HAG+++
Sbjct: 359 MLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLG 418
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM Y + P LEHY CM+DLLG +G F +AE++I+ M +PD IW S+LKAC+
Sbjct: 419 RHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACK 478
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L A+ L P +P YV+LSN+YAT G W+ ++++R G KK G
Sbjct: 479 MHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGC 538
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 539 SSIEIDS 545
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 183/394 (46%), Gaps = 38/394 (9%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LK+C L S+ LQ
Sbjct: 27 NLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA--SKEGLQ 84
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GYELD V ++LI + YA G
Sbjct: 85 IHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGY 144
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
++SA +F +P KDVV+W+ +I G + G A LF++M+ +N ++ + +V+
Sbjct: 145 IESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISA 204
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ S+ G+QVH++ GF + +LID Y KCGE++ LF + +DV+SW
Sbjct: 205 SARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISW 264
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L +L AC H G ++ W K
Sbjct: 265 NILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDK 324
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
G+ ++D+ + G + A Q+ M K W +M+ H
Sbjct: 325 RLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHK-SLPAWNAMIFGFAMHGRANAA 383
Query: 611 SIIAEQLLATS--PEDPSKYVMLSNVYATLGMWD 642
I ++ P+D + +V L + + GM D
Sbjct: 384 FDIFSRMRKNEIKPDDIT-FVGLLSACSHAGMLD 416
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 185/438 (42%), Gaps = 72/438 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK---------- 59
L+ C + ++ K+G +H ++K G D++ +L+SMY L DAHK
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 60 ---------------------LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+FDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK- 188
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ A + SG ++LGR +H I + ++N L+D Y KCG +
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF S Y +V WN ++ G ++ + ++ G DVT+ S+
Sbjct: 249 ACGLFLGLS------YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSI 302
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMYS C + A
Sbjct: 303 LHACAHLGAIDIGRWIHVYIDKR--------LKGVTNASSLRTS-LIDMYSKCGDIEAAH 353
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + ++ WN+MI G+ ++ + A + S + + + D TF L
Sbjct: 354 QVFN------SMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407
Query: 328 AC--INLLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
AC +L+ F H +T E Y +IDL G K A E+ +
Sbjct: 408 ACSHAGMLDLGRHIFRSMTHNYKITPKLE-HY---GCMIDLLGHSGLFKEAEEMISTMTM 463
Query: 384 KKDVVAWSGLIMGCTKHG 401
+ D V W L+ C HG
Sbjct: 464 EPDGVIWCSLLKACKMHG 481
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/549 (21%), Positives = 207/549 (37%), Gaps = 136/549 (24%)
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
F L A +F+ + N++ W TM + + P A++LY M+ G + PN + +
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLL-PNSYTFPF 68
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-- 166
+LK+C+ G IH + + E D + +L+ MYV+ L K+FD+ S+
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 167 ----------WAASAY-------------GNVALWNSMLSG------------------- 184
+A+ Y +V WN+M+SG
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 185 -------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
G+QVH++ GF + +LID Y KCGE++
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF + +DV+SW +I G Y++ N+ EA LF +
Sbjct: 249 ACGLFLGLSYKDVISWNILIGG---------------YTHLNLYKEALLLFQE------- 286
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ SG + T S L AC +L +
Sbjct: 287 ------------------------------MLRSGESPNDVTMLSILHACAHLGAIDIGR 316
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+ V+ G + ++LID+Y++ G++++A ++F+ + K + AW+ +I G
Sbjct: 317 WIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM 376
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV-----HAFCVKRGFE 454
HG + A+ +F M + + +L CS L G+ + H + + E
Sbjct: 377 HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLE 436
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ID+ G + + M E D V W ++ C +G + + Q
Sbjct: 437 H----YGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 514 MIQSRLKPN 522
+ +++PN
Sbjct: 493 LF--KIEPN 499
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 34/293 (11%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A+ +F + + +++ W+ + G A L+ MI+ N + +LK C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L + + G Q+H +K G+E + TSLI MY++ ++D +F RDVVS+T +
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 495 IVGCG-------------------------------QNGRAKEAIAYFQEMIQSRLKPNE 523
+ G + G KEA+ F+EM+++ ++P+E
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
T + V+SA +G +E + + + ++G +L+ ++D + G + A L
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIA-DHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+ +K D W ++L TH N +++ Q + S E P+ MLS ++A
Sbjct: 255 GLSYK-DVISW-NILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 143/336 (42%), Gaps = 38/336 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + + SI+ G+ +H I +G ++ N L+ Y+ + A LF
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ K+++SW ++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE-SPNDVTMLSILHACAHLGAI 312
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
D+GR IH I + + + + L +L+DMY KCG + + + + + ++ WN
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEA----AHQVFNSMLHKSLPAWN 368
Query: 180 SMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ G G+ AF + K + +D+T L+ G +D G +F M
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W-----AAS 279
++ GC ++D+ + + EA ++ + W A
Sbjct: 429 YKITPKLEHYGC----------MIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACK 478
Query: 280 AYGNVALWNSMISG-YVLNEQNEEAITLLSHIHSSG 314
+GNV L + + N + LLS+I+++
Sbjct: 479 MHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 201/740 (27%), Positives = 347/740 (46%), Gaps = 113/740 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I++ L+ C +I++ +H +I L D + +L+ +L+ AH++
Sbjct: 38 IIDLLKSCS---NIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W T++ P + Y HM+ G V + + ++ AC + D+ LG
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQG-VLLDISTFHFLIHACCKNFDVKLGS 153
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
+H RI + + L N L+ +Y KCG L +LF++ + + +V WN+M+S
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMT------HRDVISWNTMIS 207
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
GK++H + V
Sbjct: 208 CYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWI 267
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPER--DVVSWTGIIVGCFECSCFTLSALVDMY 257
L L+DMY KCG++D+ L + E DVV WT ++ G Y
Sbjct: 268 RGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSG---------------Y 312
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
N + +AR+LFD+ + + + W +M+SGYV E++ L + +
Sbjct: 313 VKSNKIDKARQLFDKMNERSLVS------WTTMMSGYVQGGYYCESLELFQQMRFENVIP 366
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL- 376
D + L AC++L +F+ VH IVT G +D +G+ L+DLYA+ G + AL
Sbjct: 367 DEVALVTVLSACVHLEDFD--LGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALR 424
Query: 377 ------------------------------ELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ F+++P+KD+V+W+ ++ KH L + +
Sbjct: 425 TFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES 484
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+ +F M +SN ++ + S+L C+ + +L G V+ + K + + T+LIDM
Sbjct: 485 FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDM 544
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG ++ +F + E++V WT ++ G+A EAI + EM + +KP+ +TF
Sbjct: 545 YGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTF 604
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ +L+AC H GLV+E + F ++ Y + P + HY CMVDLLG+ G ++ + I MP
Sbjct: 605 IALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+PD +IW+S+++AC +H+N +L +QL+ P + +V+LSN+YA G WD +SK
Sbjct: 665 IEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSK 724
Query: 647 VRKAGKKLG-EKKAGMSWIE 665
VR + G K+ G + IE
Sbjct: 725 VRTKLHETGVPKQPGFTMIE 744
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L C + ++ G ++ I K + D G L+ MY + A+++F
Sbjct: 499 DKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIF 558
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ KN+ WT M+ AY + AI LY M E G V+P+ + A+L ACS G +
Sbjct: 559 TQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERG-VKPDHVTFIALLAACSHGGLV 617
Query: 122 DLG 124
D G
Sbjct: 618 DEG 620
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 208/712 (29%), Positives = 324/712 (45%), Gaps = 130/712 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C ++ K++HC I+K G D+F N LL+ Y DA LFDEM +N
Sbjct: 56 LRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ T+ Y +P G ++
Sbjct: 116 VSYVTLTQGYACQ-------------------DPVG---------------------LYS 135
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
R+ RE E + + + L ++V SL + + W +H
Sbjct: 136 RLHREGHELNPHVFTSFLKLFV---SLDK--------------AEICWW---------LH 169
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-----GCFE 244
+ VK G++ +LI+ Y CG +D ++F + +D+V W GI+ GCFE
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFE 229
Query: 245 CS---------------------------------------------CFTLS-----ALV 254
S C+ L L+
Sbjct: 230 DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLL 289
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+Y+ + +A K+F++ +V W+ MI+ + N +A+ + +
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPK------NDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF 343
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ + +T +S L C + S Q+HGL+V G++LD V + LID+YA+ + +
Sbjct: 344 VVPNEFTLSSILNGCA--IGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A++LF L K+VV+W+ +I+G G A +FR+ + + V + SS L C+
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
LAS+ G QVH +K K SLIDMY KCG+I +F M DV SW +
Sbjct: 462 LASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNAL 521
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G +G ++A+ F M S KPN +TFLGVLS C +AGL+++ F SM ++G
Sbjct: 522 ISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHG 581
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
+EP LEHY CMV L G++G D A LI +P++P IW +ML A N + A
Sbjct: 582 IEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSA 641
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
E++L +P+D + YV+LSN+YA W +++ +RK+ K+ G KK G+SWIE
Sbjct: 642 EEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIE 693
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 11/299 (3%)
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
C+DS+ + + L+ CI +S A +H I+ G LD + L++ Y + G K A
Sbjct: 46 CLDSHAYGTMLRRCIR--KNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
L LF +P+++ V++ L G L L R+ ++N + +S LK+ L
Sbjct: 104 LNLFDEMPERNNVSYVTLTQGYACQDPVGLYSRLHRE----GHELNPHVFTSFLKLFVSL 159
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+H+ VK G++ +LI+ Y CG +D ++F+ + +D+V W GI+
Sbjct: 160 DKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIV 219
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYG 554
+NG ++++ M PN TF L A G A ++ +K Y
Sbjct: 220 SCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYE 279
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML-KACETHNNTKLVSI 612
L+P + ++ L Q G DA ++ EMP K D W+ M+ + C+ K V I
Sbjct: 280 LDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNKAVDI 335
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C S++ G +H IK ++ + N+L+ MYA + A +F+EM +
Sbjct: 455 ALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETID 514
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SW +++ Y+++ A+R+++ +++ +PNG + VL CS +G +D G+
Sbjct: 515 VASWNALISGYSTHGLGRQALRIFD-IMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCF 573
Query: 129 ER-ITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLSGG- 185
E I +E ++ ++ + G L + + + + S V +W +MLS
Sbjct: 574 ESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPS----VMIWRAMLSASM 629
Query: 186 KQVHAFCVKRGFE-------KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q + +R E K++ T L +MY + + ++ M E+ V G+
Sbjct: 630 NQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGL 689
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 327/643 (50%), Gaps = 46/643 (7%)
Query: 42 NNLLSMYA-DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
N LL+ Y+ L A ++FDE+ R + SW +++TA+ S A L M G
Sbjct: 28 NQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQG- 86
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
V N F + L++ + + LG + + L + + LL MY KCG + R
Sbjct: 87 VAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDAR 146
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKE-----DVTLTSLID 209
++FD N WN++++G GK + A + E E + T +L+
Sbjct: 147 RVFDGMPE------RNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLT 200
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS-ALVDMYSNCNVLCEARK 268
+ DD +V + G +G T+S A + YS C L E+R+
Sbjct: 201 AF------DDSNYFLMHQLHGKIVKY-GSALG------LTVSNAAITAYSQCGALAESRR 247
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCIDSYTFTSALK 327
+FDQ ++ WN+M+ Y + + +A+ I SG+ +D Y+FTS +
Sbjct: 248 IFDQIGD-----SRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIIS 302
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL-GN--VKSALELFHRLPK 384
C + R +HGL++ +G E V + LI +Y R+ GN ++ A + F L
Sbjct: 303 TCPEHDDHQGR---AIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLI 359
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KD V+W+ ++ G ++H L++ A FR M ++N +++ S+ L+ CS LA L+ G+Q+
Sbjct: 360 KDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQI 419
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H + GF + +SLI MY K G +DD F+ + V W +I G Q+G A
Sbjct: 420 HGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHA 479
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+ F EM++ ++ + +TF+G++++C HAGLV+E I +M+ YG+ +EHY C
Sbjct: 480 HIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYAC 539
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
VDL G+AG + A++LI MPF+PD +W ++L AC H N +L S +A LL + P+
Sbjct: 540 GVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQ 599
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
S Y++LS++Y+ LGMW + V++ K G K G SWIEV
Sbjct: 600 HSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWIEV 642
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 237/539 (43%), Gaps = 50/539 (9%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
+LR R G L K GL+ ++F + LL MYA + DA ++FD M +N
Sbjct: 97 SLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERN 156
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW ++ Y + + A+ L+ +M E + P+ ++A+L A S + +L H
Sbjct: 157 TVSWNALIAGYVESGKVLQALELFINM-ETERLVPDEATFAALLTAFDDSNYFLMHQL-H 214
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+I + + N + Y +CG+L +R++FDQ + ++ WN+ML G
Sbjct: 215 GKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGD-----SRDLISWNAML-GAY 268
Query: 187 QVH-------AFCVK----RGFEKEDVTLTSLIDMYLKCGEIDD--GLALFNFMPERDVV 233
H F V+ G + + + TS+I C E DD G A+
Sbjct: 269 TYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIIS---TCPEHDDHQGRAIHGL------- 318
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLC---EARKLFDQYSSWAASAYGNVALWNSM 290
+I E + +AL+ MY+ + C +A K FD + WNSM
Sbjct: 319 ----VIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSL------LIKDTVSWNSM 368
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++GY + + +A+ + S+ + D Y F++AL++C L + Q+HG I+ S
Sbjct: 369 LTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVL--QLGRQIHGSIIHS 426
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G+ + V S+LI +Y++ G + A + F K V W+ +I G +HG + + LF
Sbjct: 427 GFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLF 486
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLK 469
+M+ ++ ++ CS + G ++ +A + G +D+Y +
Sbjct: 487 NEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGR 546
Query: 470 CGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
G+++ L MP E D + W ++ C +G + A ++ S K + L
Sbjct: 547 AGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYIL 605
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 317/639 (49%), Gaps = 90/639 (14%)
Query: 40 TGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG 99
T N ++S Y + A K+F++M ++++SW M++ Y N + A L+N M E
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD 152
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
V ++A+L + +G ++ R I +++ L + + N LL YV+ G +
Sbjct: 153 VVS-----WNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
R+LFD +W + WN ++ G Y++ +
Sbjct: 204 RRLFDSKMDW------EIVSWNCLMGG--------------------------YVRKKRL 231
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
DD +LF+ MP RD +SW +I G Y+ +L EAR+LF++
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITG---------------YAQNGLLSEARRLFEEL---- 272
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+V W +M+SG+V N +EA + + N +++N+
Sbjct: 273 --PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK-----------------NEVSWNA 313
Query: 338 RFALQVHGLIVTSGYEL-DYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVAW 390
A V + EL D + N ++ YA+ GN+ A LF +P++D ++W
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + G + A LF M +N+ ++ L C+ +A+L GKQ+H VK
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
GF+ I +L+ MY KCG I++ +F+ + E+D+VSW +I G ++G KEA+A
Sbjct: 434 AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ M + +KP+++T +GVLSAC H GLV++ F SM YG+ + +HY CM+DLLG
Sbjct: 494 FESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG D+A L+ MPF PD W ++L A H +T+L AE++ P++ YV+
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVL 612
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
LSN+YA G W + ++R + G KK G SW+E+ +
Sbjct: 613 LSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQN 651
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 197/479 (41%), Gaps = 105/479 (21%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ + +I + N L+ Y L+DA LFD M ++ +SW M+T Y N +
Sbjct: 205 RLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSE 264
Query: 88 AIRLYNHMLEYGSVEP--NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A RL+ + P + F ++A++ +G LD RI E E + V N
Sbjct: 265 ARRLFEEL-------PIRDVFAWTAMVSGFVQNGMLDEA----TRIFEEMPEKNEVSWNA 313
Query: 146 LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
++ YV+ + R+LFDQ + N + WN+M++G
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPS------RNTSSWNTMVTG------------------- 348
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
Y +CG ID LF+ MP+RD +SW +I G
Sbjct: 349 -------YAQCGNIDQAKILFDEMPQRDCISWAAMISG---------------------- 379
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y + Q+EEA+ L + G ++
Sbjct: 380 ------------------------------YAQSGQSEEALHLFIKMKRDGGILNRSALA 409
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
AL +C + Q+HG +V +G++ YI G+ L+ +Y + G+++ A ++F +
Sbjct: 410 CALSSCAEIAAL--ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+KD+V+W+ +I G +HG A LF M + + + + VL CS + +G +
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKP-DDVTLVGVLSACSHTGLVDKGME 526
Query: 444 -VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
++ G T +ID+ + G +D+ L L K MP D +W G ++G +
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW-GALLGASR 584
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +++ GK LH R++K G GN LL+MY S+ +A +F+++ K+
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKD 470
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLI 127
IVSW TM+ Y + A+ L+ M +++P+ VL ACS +G +D G
Sbjct: 471 IVSWNTMIAGYARHGFGKEALALFESM--KMTIKPDDVTLVGVLSACSHTGLVDKGMEYF 528
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + + ++D+ + G L L S Y + A W ++L G +
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS---MPFYPDAATWGALL-GASR 584
Query: 188 VHA 190
+H
Sbjct: 585 IHG 587
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 328/659 (49%), Gaps = 34/659 (5%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + +IK GL + L+S+++ + S+N+A ++F+ + K + TM+
Sbjct: 61 SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y N A+ M Y V+P + ++ +LK C + DL G+ IH ++
Sbjct: 121 GYAKNSSLETALAFLCRM-RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
+ M +++MY KC R++ D Y + ++ WN++++G Q GF
Sbjct: 180 ANVFAMTGVVNMYAKC----RQIDDAYKMFDRMPERDLVSWNTIIAGFSQ-------NGF 228
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI--------IVGCFECSCFT 249
K+ + L + G+ D + L +P V + I F
Sbjct: 229 AKKALELVLRMQ---DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+AL DMYS C + AR +FD V WNSM+ GYV N + E+AI +
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQ------KTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ G+ T AL AC +L + +F VH + D V ++LI +Y++
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERGKF---VHKFVDQLNLGSDISVMNSLISMYSK 396
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
V A ++F+ L + V+W+ +I+G ++G S A F +M + + F + SV
Sbjct: 397 CKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSV 456
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+ + L+ R K +H ++ +K T+L+DMY KCG I LF + +R V
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
++W +I G G +G + A+ F +M + ++PN+IT+L V+SAC H+GLV+E F S
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKS 576
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
MK +YGLEP ++HY MVDLLG+AG +A I MP P T++ + AC+ H N +
Sbjct: 577 MKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIE 636
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+ A++L +P++ +V+L+N+YA+ W +++VRK +K G KK G S +E+
Sbjct: 637 VGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 224/501 (44%), Gaps = 38/501 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG +K+GK +H ++I + ++F +++MYA ++DA+K+FD M +++
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T++ ++ N A+ L M + G P+ VL A + G L +G+ IH
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R + L DMY KCGS+ R +FD V WNSM+ G
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ------KTVVSWNSMMDGYVQ 326
Query: 185 -GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+ A V + G + VT+ + G+++ G + F+ + ++ S +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+++L+ MYS C + A +F+ + + WN+MI GY N
Sbjct: 387 -----------MNSLISMYSKCKRVDIASDIFNNLNGRTHVS------WNAMILGYAQNG 429
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ EA+ S + S GM DS+T S + A L +R A +HGLI+ S + + V
Sbjct: 430 RVSEALNCFSEMKSLGMKPDSFTMVSVIPALAEL--SVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+Y++ G + A +LF + + V+ W+ +I G HGL A LF M
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 419 DVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ N SV+ CS + G + + G E +++D+ + G I +
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAW 607
Query: 478 ALFKFMPERDVVSWTGIIVGC 498
+ MP ++ G G
Sbjct: 608 DFIENMPISPGITVYGAXXGA 628
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+EAL C +++GK +H + + L DI N+L+SMY+ ++ A +F+ +
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ VSW M+ Y N R + A+ ++ M G ++P+ F +V+ A + +
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRHAK 470
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH I R L+ + + L+DMY KCG+ + RKLFD S+ +V WN+M+
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR------HVITWNAMID 524
Query: 184 GGKQVHAFC---------VKRG-FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G H +K+G E D+T S+I G +D+GL F M +
Sbjct: 525 -GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 322/656 (49%), Gaps = 86/656 (13%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
DI N ++ + + A +LF+ M R++ +SW M++ SN + A +L+ M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
V ++ ++ C +L RL+ +++ E D V N +L Y + G +
Sbjct: 108 TRDLVS-----WNVMISGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQNGYV 158
Query: 157 --TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-CVKRGFE-KEDVTLTS---LID 209
+++FD+ N WN ML+ Q +R FE K D L S ++
Sbjct: 159 KEAKEIFDEM------PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMG 212
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFECS----CFTLSAL 253
Y+K + D +F+ MPERD VSW +I G FE S FT +A+
Sbjct: 213 GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAM 272
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
V Y +L EAR++FD N WN++I+GYV ++ ++A L +
Sbjct: 273 VSGYVQNGMLDEARRVFDGMPE------KNSVSWNAIIAGYVQCKRMDQARELFEAM--- 323
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
C N+ ++N+ +I YA+ G++
Sbjct: 324 --------------PCQNVSSWNT------------------------MITGYAQNGDIA 345
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A F R+P++D ++W+ +I G + G A LF +M + +N+ +S L C+
Sbjct: 346 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 405
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+A+L GKQVH VK G E +L+ MY KCG IDD +F+ + E++VVSW
Sbjct: 406 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 465
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G ++G KEA+ F+ M ++ + P+++T +GVLSAC H GLV++ F SM +Y
Sbjct: 466 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 525
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+ + +HY CM+DLLG+AG DDA+ L+ MPF+PD W ++L A H NT+L
Sbjct: 526 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 585
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
A+ + P++ YV+LSN+YA G W + ++R + G KK G SW+EV +
Sbjct: 586 AKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQN 641
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 219/475 (46%), Gaps = 50/475 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+ + N +LS YA + +A ++FDEM KN +SW M+ AY N R A RL+
Sbjct: 140 RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESK 199
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL-EYDTVLMNTLLDMYVKCG 154
++ + N C + G + RL+ R +++ E D V NT++ Y + G
Sbjct: 200 ADWELISWN----------CMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG 249
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF-EKEDVTLTSL 207
L ++LF++ S +V W +M+SG G A V G EK V+ ++
Sbjct: 250 ELLEAQRLFEE------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAI 303
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
I Y++C +D LF MP ++V SW +I G Y+ + +AR
Sbjct: 304 IAGYVQCKRMDQARELFEAMPCQNVSSWNTMITG---------------YAQNGDIAQAR 348
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
FD+ + + W ++I+GY + EEA+ L + G ++ TFTS L
Sbjct: 349 NFFDRMPQRDSIS------WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 402
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C + QVHG +V +G E VG+ L+ +Y + GN+ A +F + +K+V
Sbjct: 403 TCAEIAALE--LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEV 460
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHA 446
V+W+ +I G +HG A +LF M + + + VL CS + +G + ++
Sbjct: 461 VSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYS 520
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
G T +ID+ + G +DD L K MP E D +W G ++G +
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW-GALLGASR 574
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 173/423 (40%), Gaps = 78/423 (18%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ + ++ + N ++ Y L DA +FD M ++ VSW TM++ Y N
Sbjct: 194 RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE 253
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A RL+ S + F ++A++ +G LD R + + + E ++V N ++
Sbjct: 254 AQRLFEE-----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAII 304
Query: 148 DMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKE 200
YV+C + R+LF+ A NV+ WN+M++G Q R F +++
Sbjct: 305 AGYVQCKRMDQARELFE------AMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRD 358
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMP---ER-DVVSWTGIIVGC-------------- 242
++ ++I Y + G ++ L LF M ER + ++T + C
Sbjct: 359 SISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHG 418
Query: 243 ------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
E C+ +AL+ MY C + +A +F+ V WN+MI+GY
Sbjct: 419 RVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE------KEVVSWNTMIAGYAR 472
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-- 354
+ +EA+ L + +G+ D T L AC H +V G E
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSAC-------------SHTGLVDKGTEYFY 519
Query: 355 ----DYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLN 403
DY + +N +IDL R G + A L +P + D W L+ HG
Sbjct: 520 SMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNT 579
Query: 404 SLA 406
L
Sbjct: 580 ELG 582
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++ GK +H R++K GL + GN LL MY +++DA+ +F+ + K +
Sbjct: 401 LSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEV 460
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSW TM+ Y + A+ L+ M + G + P+ VL ACS +G +D G
Sbjct: 461 VSWNTMIAGYARHGFGKEALMLFESMKKTG-ILPDDVTMVGVLSACSHTGLVDKG 514
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/672 (28%), Positives = 340/672 (50%), Gaps = 43/672 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-N 68
L+ C + R I+ G LH ++K G F N L+SMYA L+ A +LFD K +
Sbjct: 152 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 211
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V W +++++Y+++ + + L+ M G PN + + L AC LG+ IH
Sbjct: 212 AVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIH 270
Query: 129 ERITREKLEYDTVLM-NTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGG 185
+ + + + N L+ MY +CG + + ++ Q +N +V WNS++ G
Sbjct: 271 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN------ADVVTWNSLIKGY 324
Query: 186 KQVHAF---------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW- 235
Q + + G + ++V++TS+I + + G+ L ++ + W
Sbjct: 325 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH---GWD 381
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+ + VG + L+DMYS CN+ C + F + ++ W ++I+GY
Sbjct: 382 SNLQVG---------NTLIDMYSKCNLTCYMGRAFLRMHD------KDLISWTTVIAGYA 426
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N+ + EA+ L + M ID S L+A L + ++H I+ G LD
Sbjct: 427 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM--LIVKEIHCHILRKGL-LD 483
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
++ + L+D+Y + N+ A +F + KDVV+W+ +I +G S A LFR M+
Sbjct: 484 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 543
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ + + +L + L++L +G+++H + +++GF E +++DMY CG++
Sbjct: 544 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 603
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
A+F + + ++ +T +I G +G K A+ F +M + P+ I+FL +L AC H
Sbjct: 604 AKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSH 663
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGL++E M+ EY LEP EHY C+VD+LG+A C +A + + M +P +W
Sbjct: 664 AGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWC 723
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC +H+ ++ I A++LL P++P V++SNV+A G W+ + KVR K G
Sbjct: 724 ALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASG 783
Query: 656 -EKKAGMSWIEV 666
EK G SWIE+
Sbjct: 784 MEKHPGCSWIEM 795
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 227 MPERDVVSWTGIIVGCFE-CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+P + + G++ F+ ++ V+ ++ LC R+ Q +
Sbjct: 52 VPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAF 111
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN+MI YV N + A+ L ++ G+ + +F + LKAC L + R ++H
Sbjct: 112 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI--RSGSELHS 169
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNS 404
L+V GY + + L+ +YA+ ++ +A LF +K D V W+ ++ + G +
Sbjct: 170 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 229
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSL 463
LFR+M + N + I S L C + + GK++HA +K ++ + +L
Sbjct: 230 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 289
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I MY +CG++ + + M DVV+W +I G QN KEA+ +F +MI + K +E
Sbjct: 290 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 349
Query: 524 ITFLGVLSA 532
++ +++A
Sbjct: 350 VSMTSIIAA 358
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
S ++F +P + AW+ +I +G + A L+ +M + ++LK C+
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK-FMPERDVVSWT 492
L +R G ++H+ VK G+ + +L+ MY K ++ LF F + D V W
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
I+ +G++ E + F+EM + PN T + L+AC + I S+
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276
Query: 553 YGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
L Y C ++ + + G AE+++ +M D W S++K
Sbjct: 277 STHSSEL--YVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 323
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 330/660 (50%), Gaps = 41/660 (6%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
KS+H +IIK +S + F L+ +Y+D L A +FD+ + M+ + N
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
++ RL+ M+ +E N + LKAC+ D ++G I R +
Sbjct: 124 QQHMEVPRLFR-MMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYV 182
Query: 143 MNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF--------- 191
+++++ VK G L +K+FD +V WNS++ G Q F
Sbjct: 183 GSSMVNFLVKRGYLADAQKVFDGMPE------KDVVCWNSIIGGYVQKGLFWESIQMFLE 236
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
+ G VT+ +L+ CG+ GL V++ F L+
Sbjct: 237 MIGGGLRPSPVTMANLLK---ACGQ--SGLKKVGMCAHSYVLALG------MGNDVFVLT 285
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+LVDMYSN A +FD S + + WN+MISGYV N E+ L +
Sbjct: 286 SLVDMYSNLGDTGSAALVFDSMCSRSLIS------WNAMISGYVQNGMIPESYALFRRLV 339
Query: 312 SSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
SG DS T S ++ C + N R +H I+ E ++ + ++D+Y++ G
Sbjct: 340 QSGSGFDSGTLVSLIRGCSQTSDLENGRI---LHSCIIRKELESHLVLSTAIVDMYSKCG 396
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+K A +F R+ KK+V+ W+ +++G +++G A LF M N + S++
Sbjct: 397 AIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVH 456
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF-MPERDVV 489
C+ L SL +G+ VHA ++ G+ + + ++LIDMY KCG+I LF +DV+
Sbjct: 457 CCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVI 516
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+I+G G +G + A+ + MI+ RLKPN+ TF+ +L+AC H+GLVEE +F SM
Sbjct: 517 LCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ ++ + P +HY C+VDL +AG ++A++L+ +MPF+P + ++L C TH NT +
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNM 636
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
IA++L++ + YVMLSN+YA W+S++ +R + G KK G S IEV +
Sbjct: 637 GIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGN 696
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 217/552 (39%), Gaps = 102/552 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + G + ++ G ++ G+++++ L DA K+FD M K+
Sbjct: 151 ALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKD 210
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V W +++ Y +I+++ M+ G + P+ + +LKAC SG +G H
Sbjct: 211 VVCWNSIIGGYVQKGLFWESIQMFLEMIG-GGLRPSPVTMANLLKACGQSGLKKVGMCAH 269
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYS-----NWAASAYGNV------ 175
+ + D ++ +L+DMY G +FD +W A G V
Sbjct: 270 SYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIP 329
Query: 176 ---ALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
AL+ + L G+ +H+ +++ E V T+++
Sbjct: 330 ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIV 389
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KCG I +F M +++V++WT ++VG +
Sbjct: 390 DMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQ------------------------ 425
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+GY E+A+ L + + +S T S +
Sbjct: 426 -----------------------NGYA-----EDALKLFCQMQEEKVAANSVTLVSLVHC 457
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF-HRLPKKDV 387
C +L + VH + GY D ++ S LID+YA+ G + SA +LF + KDV
Sbjct: 458 CAHLGSLTK--GRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDV 515
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV-HA 446
+ + +IMG HG A ++ MI NQ S+L CS + GK + H+
Sbjct: 516 ILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHS 575
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK---FMPERDVVSWTGIIVGCGQNGR 503
+ L+D++ + G +++ L K F P DV+ ++ GC +
Sbjct: 576 MERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLE--ALLSGCRTHKN 633
Query: 504 AKEAIAYFQEMI 515
I +I
Sbjct: 634 TNMGIQIADRLI 645
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 180/466 (38%), Gaps = 125/466 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CGQ K G H ++ G+ D+F +L+ MY++ A +FD M +++
Sbjct: 253 LKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSL 312
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW M++ Y N + L+ +++ GS +G + S +++ CS + DL+ GR++H
Sbjct: 313 ISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVS-LIRGCSQTSDLENGRILHS 371
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
I R++LE VL ++DMY KCG++ + + NV W +ML G
Sbjct: 372 CIIRKELESHLVLSTAIVDMYSKCGAIKQATI----VFGRMGKKNVITWTAMLVGLSQNG 427
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G+ VHA ++ G+ + V +
Sbjct: 428 YAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITS 487
Query: 206 SLIDMYLKCGEIDDGLALFNF-MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+LIDMY KCG+I LFN +DV+ +I+G
Sbjct: 488 ALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMG----------------------- 524
Query: 265 EARKLFDQYSSWAASAYGNVAL--WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ +G AL ++ MI + Q TF
Sbjct: 525 -----------YGMHGHGRYALGVYSRMIEERLKPNQT--------------------TF 553
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSAL 376
S L AC S L G + E D+ V L+DL++R G ++ A
Sbjct: 554 VSLLTAC-------SHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEAD 606
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKH-----GLNSLAYLLFRDMINS 416
EL ++P + L+ GC H G+ L+ D +NS
Sbjct: 607 ELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNS 652
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V +R C Q ++ G+ LH II+ L + ++ MY+ ++ A +F
Sbjct: 346 DSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVF 405
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M +KN+++WT M+ + N A++L+ M E V N +++ C+ G L
Sbjct: 406 GRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEE-KVAANSVTLVSLVHCCAHLGSL 464
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
GR +H R +D V+ + L+DMY KCG + KLF+ + +V L N
Sbjct: 465 TKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLK-----DVILCN 519
Query: 180 SMLSG------GKQ---VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
SM+ G G+ V++ ++ + T SL+ G +++G ALF+ M
Sbjct: 520 SMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERD 579
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
V C LVD++S L EA +L Q
Sbjct: 580 HDVRPQHKHYAC----------LVDLHSRAGRLEEADELVKQ 611
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 199/655 (30%), Positives = 330/655 (50%), Gaps = 105/655 (16%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
Y+ +L+ + D + G+ +H I + D N LL+ YV G L KLFD+
Sbjct: 6 YANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP 65
Query: 166 -----NWAASAYG------------------------NVALWNSML---------SGGKQ 187
++ A G N ++ ++L
Sbjct: 66 LTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLS 125
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
VHA+ K G + + T+LID Y CG +D +F+ + +D+VSWTG++ E C
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 248 --------------------FTLSA----------------------------------- 252
FT+SA
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+++Y+ + EA++ F++ ++ W+ MIS Y +++++EA+ L +
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPK------DDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299
Query: 313 SGMCI-DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S + + +++TF S L+AC +L+ N Q+H ++ G + + V + L+D+YA+ G
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLN--LGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGE 357
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
++++++LF +K+ VAW+ +I+G + G A LF +M+ + + SSVL+
Sbjct: 358 IENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA 417
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ L +L G+Q+H+ +K + K+ + SLIDMY KCG IDD F M ++D VSW
Sbjct: 418 SASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSW 477
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I G +G EA+ F M QS KPN++TF+GVLSAC +AGL+++ F SM
Sbjct: 478 NALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQ 537
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+YG+EP +EHY CMV LLG++G FD+A +LI E+PF+P +W ++L AC H N L
Sbjct: 538 DYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGK 597
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIE 665
+ A+++L P+D + +V+LSN+YAT WD+++ VR KK +K+ G+SW+E
Sbjct: 598 VCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVE 652
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 329/656 (50%), Gaps = 53/656 (8%)
Query: 14 GQRRSIKQGKSLHCRIIK-YGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
G R + ++HC +++ + N+LL+ YA L A +LFD M N+ +
Sbjct: 20 GGRDGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTR 79
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++A + RL+ M + +V Y+A++ S +G + +
Sbjct: 80 NALLSALAHARLLPDMDRLFASMPQRDAVS-----YNALIAGFSGAGAPARAAGAYRALL 134
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW--AASAYGNVALWNSMLSGGKQVHA 190
RE+ D G+ R S AASA G+ AL G+QVH
Sbjct: 135 REEAVVD--------------GARVRPSRITMSGMVMAASALGDRAL-------GRQVHC 173
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
++ GF T + L+DMY K G I D +F+ M ++VV + +I G C
Sbjct: 174 QIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRC----- 228
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
++ EAR +F+ A + W +M++G N EA+ + +
Sbjct: 229 ----------KMVEEARGVFE------AMVDRDSITWTTMVTGLTQNGLQSEALDVFRRM 272
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+ G+ ID YTF S L AC L S Q+H + + Y+ + VGS L+D+Y++
Sbjct: 273 RAEGVGIDQYTFGSILTACGALAA--SEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCR 330
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+++ A +F R+ K++++W+ +I+G ++G A +F +M N F + SV+
Sbjct: 331 SIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVIS 390
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ LASL G Q H + G ++L+ +Y KCG I+D LF MP D VS
Sbjct: 391 SCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVS 450
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+T ++ G Q G+AKE I F++M+ +KPN +TF+GVLSAC +GLVE+ + F SM+
Sbjct: 451 YTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQ 510
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++G+ +HY CM+DL ++G +AE+ I +MP PD WA++L AC + ++
Sbjct: 511 QDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIG 570
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
AE LL T P++P+ YV+L +++A+ G W ++ +R+ + + +K+ G SWI+
Sbjct: 571 KWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIK 626
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG + ++GK +H I+ +IF G+ L+ MY+ S+ A +F M KNI
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ Y N A+R+++ M G ++PN F +V+ +C+ L+ G H
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDG-IKPNDFTLGSVISSCANLASLEEGAQFHC 406
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
L + + L+ +Y KCGS+ +LFD+ +Y + + K+
Sbjct: 407 MALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKE 466
Query: 188 VHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
K +G + VT ++ + G ++ G + F+ M + GI++
Sbjct: 467 TIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDH-----GIVLLDDH 521
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+C ++D+YS L EA + Q
Sbjct: 522 YTC-----MIDLYSRSGRLKEAEEFIRQ 544
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 203/760 (26%), Positives = 351/760 (46%), Gaps = 104/760 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L +V A G+ I G ++H + GL +++ G LL +Y ++DA +LF
Sbjct: 44 LASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFW 103
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM +N+VSWT ++ A +SN A+R Y M G V N ++ V+ C +
Sbjct: 104 EMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG-VPCNANAFATVVSLCGSLENEV 162
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYG 173
G + ++ L+ + N+L+ M+ G + KLFD+ +W A S Y
Sbjct: 163 PGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYS 222
Query: 174 N-------------------------------VALWNSMLSGGKQVHAFCVKRGFEKEDV 202
+ V + S G +H+ C++ +
Sbjct: 223 HQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT 282
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------ 244
+ +L++MY G++ D LF M RD++SW +I +
Sbjct: 283 VINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTN 342
Query: 245 ------------CSCFTLSALVD-------------------------MYSNCNVLCEAR 267
+C + AL+D MY CN + +A
Sbjct: 343 ESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAE 402
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
K+F + ++ +N +I GY + E +A+ + S + S+G+ + T + +
Sbjct: 403 KVFQSMPTH------DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN-IH 455
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
N + +H I+ +G+ D V ++LI +YA+ GN++S+ +F+ + K++
Sbjct: 456 GSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNI 515
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+W+ +I + G A LF DM ++ +++ ++ L C+ LASL G Q+H
Sbjct: 516 VSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGL 575
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+K G + + + + +DMY KCG++D+ L + R W +I G + G KEA
Sbjct: 576 GMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEA 635
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
F++M+ + KP+ +TF+ +LSAC HAGLV++ + SM +G+ P ++H C+VD
Sbjct: 636 EETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVD 695
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+ G F +AE+ I EMP P+ IW S+L + TH N ++ A++LL P D S
Sbjct: 696 LLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSA 755
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+YAT W + K+R K + K+ SW+++
Sbjct: 756 YVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKL 795
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 146/342 (42%), Gaps = 6/342 (1%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHG 345
W + +SG V ++ A +L + G+ + + S + AC + +H
Sbjct: 9 WYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHA 68
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L +G + +G+ L+ LY G V A LF +P+++VV+W+ L++ + +G
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEE 128
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A +R M N ++V+ +C L + G QV + + G + + SLI
Sbjct: 129 ALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLIT 188
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
M+ G + D LF M E D +SW +I G + F +M L+P+ T
Sbjct: 189 MFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATT 248
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++S C + I S+ L+ + +V++ AG DAE L M
Sbjct: 249 LCSLMSVCASSDHFSHGSGIH-SLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 586 PFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPS 626
+ D W +M+ + + N+T + + QL T+ E P+
Sbjct: 308 S-RRDLISWNTMISSYVQNCNSTDALKTLG-QLFHTN-ESPN 346
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 195/671 (29%), Positives = 313/671 (46%), Gaps = 89/671 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L+ I L C + S+ GK LH II GL +D F + L+ Y+ L +AH L +
Sbjct: 79 LQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVE 138
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
SW ++T+Y +K AI Y M+ G V P+ F + ++LKAC + +L
Sbjct: 139 TSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKG-VRPDNFTFPSILKACGETQNLK 197
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
G +H+ I + + N L+ MY +CG + R LFD A + WNS
Sbjct: 198 FGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVS------WNS 251
Query: 181 MLSGGKQVHAFCV-KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
M+S C RG +E L M KC EI +VV+W I
Sbjct: 252 MIS--------CYSSRGMWREAFELFE--SMQSKCLEI-------------NVVTWNIIA 288
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
GC FT
Sbjct: 289 GGCLRVGNFT-------------------------------------------------- 298
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+A+ LLS + + G+ +D L AC ++ R ++HG + + + V
Sbjct: 299 --QALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAI--RLGKEIHGFTIRHYHHMLSTVQ 354
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+ +YAR +++ A LF K + W+ ++ G T G A LFR+++ +
Sbjct: 355 NALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVE 414
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ +S+L +C+ +A L+ G++ H + K R F + +L+DMY + G++ +
Sbjct: 415 PDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKR 474
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F + ++D V++T +I G G G +A+ F+EM + ++KP+ IT + VLSAC H+GL
Sbjct: 475 IFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGL 534
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V +A +F M+ +GL P LEHY CM DL G+ G + A+++I MP++P IWA+++
Sbjct: 535 VNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLI 594
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
AC H N + AE+LL PE YV+++N+YA G W L+++R + G K
Sbjct: 595 GACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAK 654
Query: 659 -AGMSWIEVSS 668
G SW++V S
Sbjct: 655 IPGCSWVDVGS 665
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 322/694 (46%), Gaps = 140/694 (20%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
Q IF N LL+ + ++DA +LFD+M +++ +W TMV+ Y + R A L+N
Sbjct: 113 QSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFN-- 170
Query: 96 LEYGSVEPNGFMYSAVLKACSL-SGDLDLGRLIH--ERITREKLEYDTVLMNTLLDMYVK 152
GF + + SL SG GR + R +LE TL
Sbjct: 171 ---------GFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTL------ 215
Query: 153 CGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
GS+ R SA G ++ G+ +H + VK GFE + L+DMY
Sbjct: 216 -GSILR---------GCSALG-------LIQKGEMIHGYVVKNGFESNVYVVAGLVDMYA 258
Query: 213 KCGEIDDGLALFNFMP--ERDVVSWTGIIV------------------------------ 240
KC I + LF + + + V WT ++
Sbjct: 259 KCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTF 318
Query: 241 --------------------GC-----FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
GC F C+ + SALVDMY+ C L A+++ +
Sbjct: 319 PSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMED 378
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+V WNSMI G V + EEAI L +H+ M ID YTF S L CI +
Sbjct: 379 ------DDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCI-VGRI 431
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+ + VH L++ +G+E +V + L+D+YA+ ++ A +F ++ +KDV++W+ L+
Sbjct: 432 DGK---SVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVT 488
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G T++G + + F DM S +QFI++S+L C+ L L GKQVH+ +K G
Sbjct: 489 GYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRS 548
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
SL+ MY KCG +DD A+F M RDV++WT +IVG +NG+ ++++ YFQ+
Sbjct: 549 SLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQ-- 606
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
MK YG+EP EHY CM+DL G+ G
Sbjct: 607 ---------------------------------MKKIYGIEPGPEHYACMIDLFGRLGKL 633
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A++++ +M KPD T+W ++L AC H N +L A L P + YVMLSN+Y
Sbjct: 634 DEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMY 693
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
WD +K+R+ K G K+ G SWIE++S
Sbjct: 694 LAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNS 727
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 206/540 (38%), Gaps = 142/540 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA--RK 67
LR C I++G+ +H ++K G +++ L+ MYA +++A LF +A +
Sbjct: 219 LRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKG 278
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N V WT MVT Y N + AI + +M G VE N F + ++L ACS G +
Sbjct: 279 NHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEG-VESNQFTFPSILTACSSVSAHCFGEQV 337
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H I R + + + L+DMY KCG L +++ + + +V WNSM+ G
Sbjct: 338 HGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMED------DDVVSWNSMIVGC 391
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK VH +K GFE +
Sbjct: 392 VRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLV 451
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+L+DMY K +++ A+F M E+DV+SWT ++ G
Sbjct: 452 SNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTG---------------------- 489
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y N +EE++ + SG+ D +
Sbjct: 490 ------------------------------YTQNGSHEESLKTFCDMRISGVSPDQFIVA 519
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L AC L F QVH + G V ++L+ +YA+ G + A +F +
Sbjct: 520 SILSACAELTLL--EFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMH 577
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+DV+ W+ LI+G ++G + F+ M K+
Sbjct: 578 VRDVITWTALIVGYARNGKGRDSLKYFQQM----------------------------KK 609
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNG 502
++ G E +ID++ + G++D+ + M + D W ++ C +G
Sbjct: 610 IY------GIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHG 663
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C + ++ GK +H IK GL + N+L++MYA L+DA +F M
Sbjct: 518 VASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMH 577
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++++WT ++ Y N + +++ + M + +EP Y+ ++ G LD +
Sbjct: 578 VRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAK 637
Query: 126 LI 127
I
Sbjct: 638 EI 639
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 200/698 (28%), Positives = 353/698 (50%), Gaps = 77/698 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+VE R C ++K+ LH I+ G S+ + NNL+SMY SL A KLFD
Sbjct: 10 VVELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFD 69
Query: 63 EMARKNIVSWTTMVTAYTSN-KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M +N+VS+ + +AY+ N ++A L N M S++PN ++++++ C++ D+
Sbjct: 70 KMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASE-SLKPNSSTFTSLVQVCTVLEDV 128
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+G L+H +I + + V+ ++L MY CG L R++F+ + G+ WN
Sbjct: 129 LMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNG------GDAVAWN 182
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSW 235
+M+ G + +I+DGL LF M V ++
Sbjct: 183 TMIVG--------------------------IFRNDKIEDGLMLFRSMLMSGVDPTQFTY 216
Query: 236 TGIIVGCFECSCFTLS----------------------ALVDMYSNCNVLCEARKLFDQY 273
+ ++ C + + S AL+DMY +C + EA +F +
Sbjct: 217 SMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKI 276
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINL 332
+ N+ WNS+ISG N E+AI + + S D YTF++A+ A
Sbjct: 277 HN------PNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEP 330
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
F L HG + GYE VG+ L+ +Y + G +SA ++F + ++DVV W+
Sbjct: 331 EKFIHGKLL--HGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTE 388
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I+G ++ G + A LF +M + F +SSVL CS +A LR+G+ H+ +K G
Sbjct: 389 MIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTG 448
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
F+ +L+DMY K G+ + ++F + D+ W ++ Q+G ++A ++F+
Sbjct: 449 FDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFE 508
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+++++ P+ +T+L +L+AC H G +E ++ MK E G+ +HY CMV L+ +A
Sbjct: 509 QILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMK-EQGITAGFKHYSCMVSLVSKA 567
Query: 573 GCFDDAEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G +A +LI + P + ++ +W ++L AC N ++ A+Q+L PED + +++L
Sbjct: 568 GLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAADQILKLDPEDTATHILL 627
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEVSS 668
SN+YA G W ++++R+ + L K G+SWIEV++
Sbjct: 628 SNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWIEVNN 665
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 206/761 (27%), Positives = 355/761 (46%), Gaps = 106/761 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L +V A G+ I G ++H + GL +++ G LL +Y ++DA +LF
Sbjct: 346 LASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFW 405
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDL 121
EM +N+VSWT ++ A +SN A+R Y M G V N ++ V+ C SL ++
Sbjct: 406 EMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG-VPCNANAFATVVSLCGSLENEV 464
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY 172
G + ++ L+ + N+L+ M+ G + KLFD+ +W A S Y
Sbjct: 465 P-GLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMY 523
Query: 173 GN-------------------------------VALWNSMLSGGKQVHAFCVKRGFEKED 201
+ V + S G +H+ C++ +
Sbjct: 524 SHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSV 583
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-C--------------- 245
+ +L++MY G++ D LF M RD++SW +I + C
Sbjct: 584 TVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHT 643
Query: 246 --------------SCFTLSALVD-------------------------MYSNCNVLCEA 266
+C + AL+D MY CN + +A
Sbjct: 644 NESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA 703
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
K+F + ++ +N +I GY + E +A+ + S + S+G+ + T + +
Sbjct: 704 EKVFQSMPTH------DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN-I 756
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
N + +H I+ +G+ D V ++LI +YA+ GN++S+ +F+ + K+
Sbjct: 757 HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKN 816
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ +I + G A LF DM ++ +++ ++ L C+ LASL G Q+H
Sbjct: 817 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG 876
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K G + + + + +DMY KCG++D+ L + R W +I G + G KE
Sbjct: 877 LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 936
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A F++M+ + KP+ +TF+ +LSAC HAGLV++ + SM +G+ P ++H C+V
Sbjct: 937 AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 996
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+ G F +AE+ I EMP P+ IW S+L + TH N ++ A++LL P D S
Sbjct: 997 DLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDS 1056
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+YAT W + K+R K + K+ SW+++
Sbjct: 1057 AYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKL 1097
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 170/725 (23%), Positives = 294/725 (40%), Gaps = 122/725 (16%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMY---ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+H ++ L F N LL+ Y D ++ A LFDEMA + +W T V+
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---DLDLGRLIHERITREKLEY 138
A + M E G V +GF ++++ AC G + G IH R L
Sbjct: 321 CGSHGKAFEMLRGMREPG-VPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 379
Query: 139 DTVLMNTLLDMYVKCG--SLTRKLF--------------------DQYSNWAASAYGN-- 174
+ + LL +Y G S ++LF + Y A AY
Sbjct: 380 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 439
Query: 175 --------------VALWNSMLS--GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
V+L S+ + G QV + + G + + SLI M+ G +
Sbjct: 440 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499
Query: 219 DGLALFNFMPERDVVSWT---------GIIVGCF-------------------------- 243
D LF+ M E D +SW GI CF
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 244 --------------------ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+ S ++ALV+MYS L +A LF W S
Sbjct: 560 SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF-----WNMSRRDL 614
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL-- 341
++ WN+MIS YV N + +A+ L + + + TF+SAL AC +S AL
Sbjct: 615 IS-WNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC------SSPGALID 667
Query: 342 --QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
VH +++ + + +VG++LI +Y + +++ A ++F +P D+V+++ LI G
Sbjct: 668 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 727
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR-GKQVHAFCVKRGFEKEDI 458
+ A +F M ++ N + ++ + L G+ +HA+ ++ GF ++
Sbjct: 728 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 787
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
SLI MY KCG ++ +F + +++VSW II Q G +EA+ F +M +
Sbjct: 788 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 847
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
K + + LS+C +EE + + + GL+ +D+ G+ G D+
Sbjct: 848 NKLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM 906
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPSKYVMLSNVYAT 637
Q++ + +P + W +++ + K +Q++AT + D +V L + +
Sbjct: 907 LQVVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSH 965
Query: 638 LGMWD 642
G+ D
Sbjct: 966 AGLVD 970
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMY---ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+H ++ L F N LL+ Y D ++ A LFDEMA + +W T V+
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---DLDLGRLIHERITREKLEY 138
R A + M E G V +GF ++++ AC G + G IH R L
Sbjct: 98 CGRDGTAFEMLRGMRERG-VPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 156
Query: 139 DTVLMNTLLDM 149
+ + LL +
Sbjct: 157 NVYIGRALLHL 167
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 294/592 (49%), Gaps = 46/592 (7%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
+ +LK C DL G+ +H + + T N + +Y KCG L RK F S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 166 NWAASAYGNVALWNSMLSG-GKQVHAFCVKRGF----EKEDVTLTSLIDMYLKCGEIDDG 220
+ NV +N++++ K+ + F E + V+ +LI Y CGE
Sbjct: 71 D------PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 221 LALFNFMPER----DVVSWTGIIVGC------------------FECSCFTLSALVDMYS 258
L LF+ M E D + + +I C F+ +AL+ Y
Sbjct: 125 LGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L +A+++F + + WNSMI Y +++ +A+ L + G+ +D
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALE 377
+T S L A L + + LQ HG ++ +G+ + VGS LIDLY++ G + +
Sbjct: 240 MFTLASVLTAFTCLEDLSG--GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHG-LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + + D+V W+ ++ G +++ A FR M N V+ CS L+
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLS 357
Query: 437 SLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S +GKQ+H+ +K I++ +LI MY KCG + D LF M E + VS +I
Sbjct: 358 SPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMI 417
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+G E++ FQ M++ ++ P ITF+ VLSAC H G VEE W F MK ++ +
Sbjct: 418 AGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNI 477
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP EHY CM+DLLG+AG +AE LIA MPF P WAS+L AC TH N +L A
Sbjct: 478 EPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAAN 537
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
Q+L P + + YV+LSN+YA+ G W+ ++ VRK + G +KK G SWIEV
Sbjct: 538 QVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 144/596 (24%), Positives = 255/596 (42%), Gaps = 77/596 (12%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD----------FT 52
L+R L+ C R + GKSLH IK + + N+ + +Y+ F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 53 SLND---------------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRL 91
++D AH+LFD++ ++VS+ T+++AY A+ L
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
++ M E G ++ + F SAV+ AC D+ L +H + + N LL Y
Sbjct: 128 FSGMREMG-LDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAF--CVKRGFEKE 200
K G L +++F + + WNSM+ G K + F V+RG +
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TL S++ + ++ GL +I F + S L+D+YS C
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHG-----------QLIKTGFHQNSHVGSGLIDLYSKC 288
Query: 261 -NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCID 318
+ + RK+F++ + ++ LWN+M+SGY NE+ E+A+ + G +
Sbjct: 289 GGGMSDCRKVFEEITE------PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPN 342
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALE 377
+F + AC NL + + Q+H L + S + I V + LI +Y++ GN++ A
Sbjct: 343 DCSFVCVISACSNLSSPSQ--GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
LF R+ + + V+ + +I G +HG+ + LF+ M+ SVL C+
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460
Query: 438 LRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
+ G + K E E + +ID+ + G++ + L MP + W ++
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC-RHAGLVEEAWTIFTSMK 550
C +G + A+ +++Q L+P+ VLS AG EE T+ M+
Sbjct: 521 GACRTHGNIELAVKAANQVLQ--LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMR 574
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 30/243 (12%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS 71
C S QGK +H +K + S I N L++MY+ +L DA +LFD MA N VS
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS 412
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG----RLI 127
+M+ Y + ++ L+ MLE + P + +VL AC+ +G ++ G ++
Sbjct: 413 LNSMIAGYAQHGIEMESLHLFQWMLER-QIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYS-NWAA-----SAYGN 174
E+ +E + + ++D+ + G L+ R F+ S WA+ +GN
Sbjct: 472 KEKFN---IEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+ L + QV L +MY G ++ + FM +R V
Sbjct: 529 IEL---AVKAANQVLQLEPSNA-----APYVVLSNMYASAGRWEEVATVRKFMRDRGVKK 580
Query: 235 WTG 237
G
Sbjct: 581 KPG 583
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 328/627 (52%), Gaps = 41/627 (6%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A KLFD+M++ NIV++ ++++ Y + + L++ G ++ + + + L ACS
Sbjct: 20 ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLG-LKLDKYNCAGALTACS 78
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN 174
SG+L G++IH I L VL N+L+DMY KCG + R LFD +
Sbjct: 79 QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVS--- 135
Query: 175 VALWNSMLSG----GKQVHAFCVKRGFEKEDVTL-TSLIDMYLK-CGEIDDGLALFNFMP 228
WNS+++G GK + + + + T + LK C +G +F M
Sbjct: 136 ---WNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192
Query: 229 ERDVVSW---TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ ++VG +AL+DMY+ L +A ++FDQ NV
Sbjct: 193 HDHAIKLGLHLDVVVG---------TALLDMYAKTGSLDDAIQIFDQMVD------KNVV 237
Query: 286 LWNSMISGYVLNEQNEE-----AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
++N+M++G + E E+ A+ L + S G+ +T++S LKACI + +F +FA
Sbjct: 238 MYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDF--KFA 295
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
QVH L+ +G D +GS LIDLY+ LG++ AL F+ + +V + +I G ++
Sbjct: 296 KQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQN 355
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G A LF +++ + ++FI S+++ C+ + LR G+Q+ K G + I
Sbjct: 356 GEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQ 415
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
S I MY K G++ F+ M D+VSW+ +I Q+G A EA+ +F+ M ++
Sbjct: 416 NSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIE 475
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PN FLGVL AC H GLVEE F +M+ +Y ++ H++H C+VDLLG+AG DAE
Sbjct: 476 PNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAES 535
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
LI + F+ + +W ++L AC H +T +A++++ P + YV+L N+Y G
Sbjct: 536 LILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGN 595
Query: 641 WDSLSKVRK-AGKKLGEKKAGMSWIEV 666
+ SKVR ++ +K+ G+SWI++
Sbjct: 596 KLAASKVRTLMEERRIKKEPGLSWIQI 622
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/568 (22%), Positives = 218/568 (38%), Gaps = 118/568 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C Q ++ GK +H I+ YGL + N+L+ MY+ ++ A LFD + +
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS--LSGDLDLGRL 126
VSW +++ Y N + + + M + G + N + + LKACS +G G +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNG-LAFNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG 184
+H+ + L D V+ LLDMY K GSL ++FDQ + NV ++N+M++G
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVD------KNVVMYNAMMAG 245
Query: 185 -------------------------------------------------GKQVHAFCVKR 195
KQVHA K
Sbjct: 246 LLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN 305
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G ++ + LID+Y G + D L FN + +V T +I G
Sbjct: 306 GLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFG-------------- 351
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y+ N + E A++L + +
Sbjct: 352 --------------------------------------YLQNGEFESALSLFYELLTYEE 373
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D + F++ + +C N+ S +Q H V G I ++ I +YA+ G++ +A
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKV--GISRFTIFQNSQIWMYAKSGDLYAA 431
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
F ++ D+V+WS +I +HG A F M + + N F VL CS
Sbjct: 432 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491
Query: 436 ASLRRGKQVHAFCVKRGFEKEDIT-LTSLIDMYLKCGEIDDGLAL-FKFMPERDVVSWTG 493
+ G + K K + ++D+ + G + D +L + E + V W
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
++ C + A Q++I+ L+P
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIE--LEP 577
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G+ +SA +LF ++ K ++V ++ LI G + +LF ++++ +
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
L CS +L GK +H + G + + SLIDMY KCG++D LF + D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VSW +I G QNG+ +E + Q+M Q+ L N T L AC +F
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFG 189
Query: 548 SMKPEYGLE--PHLEHYY--CMVDLLGQAGCFDDAEQLIAEM 585
+M ++ ++ HL+ ++D+ + G DDA Q+ +M
Sbjct: 190 TMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM 231
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/764 (26%), Positives = 345/764 (45%), Gaps = 115/764 (15%)
Query: 6 IVEALRHCGQRRSIKQG-KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I + C + + +G + +H ++K GL ++F G +LL Y S+++A+KLF+E+
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
NIVSWT+++ Y N + +Y H+ G + G + V++ C + GD +G
Sbjct: 311 EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLI-CTGNTMATVIRTCGMFGDKTMG 369
Query: 125 RLIHERITREKLEYDTV-LMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM 181
I + + L+ +V + N+L+ M+ S+ ++F+ + WNS+
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQE------RDTISWNSI 423
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
++ G+ +H K G
Sbjct: 424 ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGL 483
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------- 244
E SL+ MY + G +D +F+ MP RD++SW ++ E
Sbjct: 484 ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVE 543
Query: 245 -----------------CSCFTL----------------------SALVDMYSNCNVLCE 265
+C+ L + LV MY ++ E
Sbjct: 544 MLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDE 603
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A+K+ +V WN++I G+ ++ I + + G+ + T +
Sbjct: 604 AQKVCKIMPE------RDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNL 657
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L C++ ++ + + +H IV +G+ELD V S+LI +YA+ G++ ++ +F L K
Sbjct: 658 LGTCMSP-DYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANK 716
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
+ W+ + +G A M N D++QF S L L L G+Q+H
Sbjct: 717 NSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLH 776
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
++ +K GFE ++ L + +DMY KCGEIDD + R SW +I ++G +
Sbjct: 777 SWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFR 836
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
+A F EM+ LKP+ +TF+ +LSAC H GLV+E F+SM E+G+ +EH C+
Sbjct: 837 QATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCI 896
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLLG++G +AE I +MP P++ +W S+L AC+ H N +L A++L + D
Sbjct: 897 IDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDD 956
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
S YV+ SNV A+ W + VRK + +KK SWI++ +
Sbjct: 957 SAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKN 1000
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 34/521 (6%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK+LH +K + Q+ F N L++MY+ F S+ A +FD+M +N SW M++ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIHERITREKLEYDT 140
+ A++ + HM E G V P+ ++ ++++ AC SG + G R IH + + L +
Sbjct: 226 VGWYHKAMQFFCHMFENG-VTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 141 VLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML----SGGKQVHAFCVK 194
+ +LL Y GS++ KLF++ N+ W S++ G +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEE------PNIVSWTSLMVCYADNGHTKEVLNIY 338
Query: 195 RGFEKEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
R + T ++ + CG D + + DV+ G S ++
Sbjct: 339 RHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILG--DVIK-----SGLDTSSVSVANS 391
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ M+ N + + EA ++F+ + WNS+I+ N + EE++ +
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQE------RDTISWNSIITASAHNGRFEESLGHFFWMRR 445
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ D T ++ L AC + + ++ +HGLI SG E + V ++L+ +YA+ G+
Sbjct: 446 THPKTDYITISALLPACGSAQHL--KWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSS 503
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +FH +P +D+++W+ ++ + G S A LL +M+ + + +N ++ L C
Sbjct: 504 EDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC 563
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
L L K VHAF + I +L+ MY K G +D+ + K MPERDVV+W
Sbjct: 564 YNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWN 620
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+I G + I F M + L N IT + +L C
Sbjct: 621 ALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTC 661
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 222/490 (45%), Gaps = 43/490 (8%)
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
++G+ +H ++ ++ +T NTL++MY K GS+ + +FD+ + N A WN
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYD------RNDASWN 217
Query: 180 SMLSG-------GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+SG K + FC + G + S++ + G + +G +
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIH----- 272
Query: 231 DVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G +V C + F ++L+ Y + EA KLF++ N+ W S
Sbjct: 273 ------GYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEE------PNIVSWTS 320
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
++ Y N +E + + H+ +G+ T + ++ C + + Q+ G ++
Sbjct: 321 LMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC--GMFGDKTMGYQILGDVIK 378
Query: 350 SGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
SG + + V ++LI ++ +V+ A +F+ + ++D ++W+ +I +G +
Sbjct: 379 SGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLG 438
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
F M ++ + IS++L C L+ G+ +H K G E SL+ MY
Sbjct: 439 HFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYA 498
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G +D +F MP RD++SW ++ ++G+ AI EM+++R N +TF
Sbjct: 499 QAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTT 558
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
LSAC + E I + + + +L +V + G+ G D+A+++ MP +
Sbjct: 559 ALSACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-E 613
Query: 589 PDKTIWASML 598
D W +++
Sbjct: 614 RDVVTWNALI 623
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 129/591 (21%), Positives = 226/591 (38%), Gaps = 154/591 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L CG + +K G+ LH I K GL ++ N+LLSMYA S DA +F
Sbjct: 451 DYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVF 510
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M ++++SW +M+ ++ + + + AI L ML+ N ++ L AC +L
Sbjct: 511 HTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACY---NL 566
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAA-SAYGNVALWNS 180
+ +++H + + ++ ++ NTL+ MY K G L D+ +V WN+
Sbjct: 567 EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFG-----LMDEAQKVCKIMPERDVVTWNA 621
Query: 181 MLSG---------------------------------------------GKQVHAFCVKR 195
++ G G +HA V
Sbjct: 622 LIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVA 681
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
GFE + +SLI MY +CG+++ +F+ + ++ +W I
Sbjct: 682 GFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFS--------------- 726
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
A + YG EEA+ ++ + + G+
Sbjct: 727 ---------------------ANAHYG----------------PGEEALKFIARMRNDGV 749
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+D ++F+ AL NL + Q+H I+ G+ELD V + +D+Y + G +
Sbjct: 750 DLDQFSFSVALATIGNLTVLDE--GQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDV 807
Query: 376 LELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
+ +PK + +W+ LI +HG A F +M++
Sbjct: 808 FRIL-PIPKIRSKRSWNILISALARHGFFRQATEAFHEMLD------------------- 847
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-----DVV 489
G + + +T SL+ G +D+GL F M +
Sbjct: 848 ----------------LGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIE 891
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
II G++GR EA + +M + PNE + +L+AC+ G +E
Sbjct: 892 HCVCIIDLLGRSGRLAEAEGFIDKM---PVPPNEFVWRSLLAACKVHGNLE 939
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+SN V++F+ K S ++ GK +HA CVK ++ +L++MY K G I
Sbjct: 144 HSNPQVSRFL----QKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIK 199
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F M +R+ SW +I G + G +A+ +F M ++ + P+ +++AC
Sbjct: 200 YAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACD 259
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+G + E + GL ++ ++ G G +A +L E+ +P+ W
Sbjct: 260 RSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSW 318
Query: 595 ASMLKACETHNNTKLVSIIAEQL 617
S++ + +TK V I L
Sbjct: 319 TSLMVCYADNGHTKEVLNIYRHL 341
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 325/650 (50%), Gaps = 47/650 (7%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLF--DEMARKNIVSWTTMVTAYTS--NKRPNWAIRLY 92
+ F+ N +LS Y+ L+ AH LF ++ V+WT M+ A+ S R + A+ L+
Sbjct: 65 NAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLF 124
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI---HERITREKLEYDTVLM-NTLLD 148
ML G V P+ + VL SG +I H + L + V++ NTLLD
Sbjct: 125 RDMLREG-VAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLD 183
Query: 149 MYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----KRGF 197
Y K G L R++F + + + Y N+M+ G G A + ++G
Sbjct: 184 AYCKHGLLAAARRVFQEMPHRDSVTY------NAMMMGCSKEGSHAEALDLFAAMRRKGL 237
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
T ++++ + G++ G R V G++ + F ++L+D Y
Sbjct: 238 AATRFTFSTVLTVATGVGDLCLG---------RQV---HGLVARATSSNVFVNNSLLDFY 285
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S C+ L E +KLF + NV+ +N MI+GY N + L + S
Sbjct: 286 SKCDCLDEMKKLFHEMIE-----RDNVS-YNVMIAGYAWNRCASIVLRLFREMQSLSFDR 339
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ + S L ++ + Q+H +V G + +VG+ LID+Y++ G + +A
Sbjct: 340 QALPYASLLSVAGSVPHIG--IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKT 397
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
F K V+W+ +I GC ++G A LF M + ++ SS +K S LA
Sbjct: 398 NFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAM 457
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+ G+Q+H++ ++ G + ++L+DMY KCG +D+ L F MPER+ +SW +I
Sbjct: 458 IGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISA 517
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G+AK AI F+ M+ KP+ +TFL VLSAC H GL EE F M+ EYG+ P
Sbjct: 518 YAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISP 577
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY C++D LG+ G FD ++++ EMPF+ D IW+S+L +C TH N L + AE+L
Sbjct: 578 WKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKL 637
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ D + YV+LSN++A G W+ + V+K + G K+ G SW+EV
Sbjct: 638 FSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEV 687
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 179/425 (42%), Gaps = 49/425 (11%)
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
VK GF+ L L+ + G + ALF+ MP R+ + F+L+
Sbjct: 26 VKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRN--------------NAFSLNR 71
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY--VLNEQNEEAITLLSHI 310
++ YS L A LF + + W MI + + +A++L +
Sbjct: 72 MLSGYSRSGQLSAAHHLFLS----SPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDM 127
Query: 311 HSSGMCIDSYTFTSALK---------ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
G+ D T + L A I + + + FAL++ GL+ + + +V +
Sbjct: 128 LREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHP-FALKL-GLLHS-----NVVVCNT 180
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D Y + G + +A +F +P +D V ++ ++MGC+K G ++ A LF M
Sbjct: 181 LLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAAT 240
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+F S+VL V + + L G+QVH V R SL+D Y KC +D+ LF
Sbjct: 241 RFTFSTVLTVATGVGDLCLGRQVHGL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFH 299
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS---ACRHAGL 538
M ERD VS+ +I G N A + F+EM + + +LS + H G+
Sbjct: 300 EMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI 359
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT--IWAS 596
++ + GL ++D+ + G D A+ K DKT W +
Sbjct: 360 GKQIHAQLVLL----GLSSEDLVGNALIDMYSKCGMLDAAKTNFIN---KNDKTGVSWTA 412
Query: 597 MLKAC 601
M+ C
Sbjct: 413 MITGC 417
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 174/454 (38%), Gaps = 109/454 (24%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++ S ++F N+LL Y+ L++ KLF EM ++ VS+ M+ Y
Sbjct: 260 GRQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAW 318
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N+ + +RL+ M S + Y+++L + +G+ IH ++ L + +
Sbjct: 319 NRCASIVLRLFREMQSL-SFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDL 377
Query: 142 LMNTLLDMYVKCGSL-------TRKLFDQYSNWAASAYGNV------------------- 175
+ N L+DMY KCG L K +W A G V
Sbjct: 378 VGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAG 437
Query: 176 -----ALWNS---------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
A ++S M+ G+Q+H++ ++ G + ++L+DMY KCG +D+ L
Sbjct: 438 LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEAL 497
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ MPER+ +SW +I
Sbjct: 498 QTFDEMPERNSISWNAVI------------------------------------------ 515
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
S Y Q + AI + + G DS TF S L AC S L
Sbjct: 516 ----------SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSAC-------SHNGL 558
Query: 342 QVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLI 394
+ E +Y + S +ID R+G E+ +P + D + WS ++
Sbjct: 559 AEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSIL 618
Query: 395 MGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISS 427
C HG LA + + + + D ++I S
Sbjct: 619 HSCRTHGNQDLARVAAEKLFSMGSTDATPYVILS 652
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 210/754 (27%), Positives = 347/754 (46%), Gaps = 110/754 (14%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C +G +++ I+ GL D++ G +L+ M+ L++A +FD+M K+
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V W M++ + + P A+ ++ M G E + + A S GD+ + IH
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEG-FEVDKVSILNLAPAVSRLGDVGCCKSIH 223
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV------ 175
+ R + V+ N+L+DMY KCG + +++FD+ +WA G V
Sbjct: 224 GYVVRRSI--CGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYF 281
Query: 176 ---ALWNSMLSG------------------------GKQVHAFCVKRGFEKEDVTLTSLI 208
L + M G GK+++ + ++ G + V T ++
Sbjct: 282 EGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIV 341
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTG------------------------------- 237
MY KCGE+ LF + RD+V+W+
Sbjct: 342 CMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKA 401
Query: 238 ----IIVGCFECS---------CFTLSA-----------LVDMYSNCNVLCEARKLFDQY 273
++ GC E S C+ + A LV MY + A LF++
Sbjct: 402 ILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRM 461
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
++ +WN++I+G+ A+ + + + SG+ DS T AC +
Sbjct: 462 Q------IKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMD 515
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWS 391
+ + +HG I SG+E D V L+D+YA+ G++ S LF L K KD V+W+
Sbjct: 516 DLD--LGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLF-LLTKHVKDEVSWN 572
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G +G ++ A FR M N N ++L S L+ LR H ++
Sbjct: 573 VMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRM 632
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
GF + SLIDMY KCG++ F M +D +SW ++ +G+ + A+A F
Sbjct: 633 GFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALF 692
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M +S ++ + ++++ VLSACRH+GL++E W IF SM ++ +EP +EHY CMVDLLG
Sbjct: 693 SVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGC 752
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG FD+ L+ +M +PD +W ++L AC+ H+N L + LL P +P +V+L
Sbjct: 753 AGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVL 812
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
S++YA G W+ + R G KK G SW+
Sbjct: 813 SDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 4/238 (1%)
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
L+NS I Y +AI L I G+ D +TF LKAC + L+F+ + ++
Sbjct: 66 LYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHE--GVNIYK 123
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
IV +G E D +G++LID++ ++G + +A +F ++P KD V W+ +I G ++
Sbjct: 124 DIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCE 183
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A +F M +V++ I ++ S L + K +H + V+R + SLID
Sbjct: 184 ALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSI--CGVVSNSLID 241
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
MY KCG++ +F M RD VSW ++ G +NG E + +M + +K N+
Sbjct: 242 MYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNK 299
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 51/235 (21%)
Query: 58 HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
H F ++ +++ + + + AY+ + AI LY+ +L+ G ++P+ F ++ VLKAC+
Sbjct: 53 HTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIG-LKPDKFTFNFVLKACTS 111
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV 175
+ D G I++ I LE D + +L+DM+ K G L R +FD+ +
Sbjct: 112 ALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKM------PVKDG 165
Query: 176 ALWNSMLSGGKQVHAFCVK---------RGFEKEDVTL---------------------- 204
WN+M+SG Q C GFE + V++
Sbjct: 166 VCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGY 225
Query: 205 -----------TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
SLIDMY KCG++ +F+ M RD VSW ++ G + C+
Sbjct: 226 VVRRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCY 280
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F ++ ++ ++ I +K A L+ ++ ++F + VLK C+
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
G ++ V G E + TSLIDM+ K G +D+ +F MP +D V W +I G
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI--FTSMKPEYGLE 556
Q+ EA+ F M + ++++ L + A G V +I + + G+
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVV 235
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ ++D+ + G A+++ M + D + WA+M+
Sbjct: 236 SN-----SLIDMYCKCGDVHSAQRVFDRMGVRDDVS-WATMM 271
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 215/750 (28%), Positives = 338/750 (45%), Gaps = 157/750 (20%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
Q ++++ H II G + ++F + L+S+YA F + + +FD +K+ W +
Sbjct: 41 QTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNS 100
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ ++ SN A Y M Y + PN F ++ C+ L+ G+ IH +++
Sbjct: 101 IIKSHFSNGNYFKAFDFYIQM-RYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKS 159
Query: 135 KL-EYDTVLMNTLLDMYVKCGSLTRK--LFDQ-----YSNWAASAYGNVALWNS------ 180
L ++ + ++ + MY KCG + +FD+ +W A G V +S
Sbjct: 160 GLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLEC 219
Query: 181 -----------------MLSGGKQ-------------VHAFCVKRGFEKEDVTLTSLIDM 210
L GG Q +H VK G V +SL+ M
Sbjct: 220 LCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSM 279
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF------EC------------------- 245
Y KCG +++ F + ++DV SWT +I C EC
Sbjct: 280 YSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVV 339
Query: 246 SCFTL------------------------------SALVDMYSNCNVLCEARKLFDQYSS 275
SC L +AL+ MY L A KLFD
Sbjct: 340 SCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHE 399
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
W+ + WN+M+ GYV
Sbjct: 400 WSKES------WNTMVFGYV---------------------------------------- 413
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
H I+ + + D + ++LID+Y + GN+ A ++F R ++DVV W+ LI
Sbjct: 414 --------HCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQRDVVTWNTLIS 464
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
T G + A LF +MI+ + N + VL C L SL +GK VH + + GFE
Sbjct: 465 SYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFEL 524
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
T+L+DMY KCG+++ LF M E+DV+SW +I G G +G A A+ FQ+M
Sbjct: 525 NVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQME 584
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
QS +KPN ITFL +LSAC HAG V+E +F M+ Y ++P+L+H+ CM DLLG++G
Sbjct: 585 QSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQ-YYSIKPNLKHFACMADLLGRSGNL 643
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+AE L+ MP PD +W ++L AC+ HN ++ +A+ + + PE+ Y+MLSN+Y
Sbjct: 644 QEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMY 703
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
++G WD + R+ K+ G K+AG S +
Sbjct: 704 GSMGKWDEAERARELMKERGIGKRAGWSAV 733
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 249/581 (42%), Gaps = 106/581 (18%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R + + CG ++ G+ LH +K GL ++LLSMY+ ++ +AH F +
Sbjct: 236 RTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQ 295
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+ K++ SWT+++ N + L+ M + V P+G + S +L S +
Sbjct: 296 VVDKDVFSWTSVIGVCARFGFMNECLNLFWDM-QVDDVYPDGIVVSCILLGFGNSMMVRE 354
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSM 181
G+ H I R D + N LL MY K G+L KLFD W+ + WN+M
Sbjct: 355 GKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKES------WNTM 408
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ G VH + +K +++ SLIDMY K G + +F +RDVV+W
Sbjct: 409 VFG--YVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMF-CRTQRDVVTW------ 459
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ L+ Y++ EA LFD+ MI
Sbjct: 460 ---------NTLISSYTHSGHYAEAITLFDE-----------------MI---------- 483
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
S + +S T L AC +L + VH I G+EL+ +G+
Sbjct: 484 ----------SEKLNPNSATLVIVLSACCHLPSLEK--GKMVHQYIKEGGFELNVSLGTA 531
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ G ++ + ELF+ + +KDV++W+ +I G HG + A +F+ M SN N
Sbjct: 532 LVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPN 591
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
S+L C+ + GKQ+ F++ ++ I L F
Sbjct: 592 AITFLSLLSACTHAGYVDEGKQL--------FDR------------MQYYSIKPNLKHFA 631
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSACRHAGLVE 540
M + G++G +EA ++++QS + P+ + +LSAC+ +E
Sbjct: 632 CMADL-----------LGRSGNLQEA----EDLVQSMPICPDGGVWGTLLSACKIHNEIE 676
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMV-DLLGQAGCFDDAEQ 580
+ K +P + YY M+ ++ G G +D+AE+
Sbjct: 677 IGIRV---AKCAIESDPENDGYYIMLSNMYGSMGKWDEAER 714
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 17/245 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C S+++GK +H I + G ++ G L+ MYA L + +LF+ M
Sbjct: 494 LVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMK 553
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++SW M++ Y + N A+ ++ M E +V+PN + ++L AC+ +G +D G+
Sbjct: 554 EKDVISWNVMISGYGLHGDANSAMEVFQQM-EQSNVKPNAITFLSLLSACTHAGYVDEGK 612
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ +R+ ++ + + D+ + G+L ++ D + G V W ++LS
Sbjct: 613 QLFDRMQYYSIKPNLKHFACMADLLGRSGNL-QEAEDLVQSMPICPDGGV--WGTLLSAC 669
Query: 186 KQVH---------AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV---V 233
K +H A C + D L +MY G+ D+ M ER +
Sbjct: 670 K-IHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRA 728
Query: 234 SWTGI 238
W+ +
Sbjct: 729 GWSAV 733
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 258/475 (54%), Gaps = 25/475 (5%)
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
+RG + +T + LI L G + +G + I + F + L
Sbjct: 278 RRGVWADSITYSELIKCCLAHGAVREGKRVHRH-----------IFSNGYHPKTFLTNIL 326
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
++MY N+L EA+ LFD+ NV W +MIS Y + N+ A+ LL+ +
Sbjct: 327 INMYVKFNLLEEAQVLFDKMPE------RNVVSWTTMISAYSNAQLNDRAMRLLAFMFRD 380
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ + +TF+S L+AC L + Q+H I+ G E D V S LID+Y+++G +
Sbjct: 381 GVMPNMFTFSSVLRACERLYDLK-----QLHSWIMKVGLESDVFVRSALIDVYSKMGELL 435
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
AL++F + D V W+ +I +H A L++ M +Q ++SVL+ C+
Sbjct: 436 EALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACT 495
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L+ L G+Q H +K F+++ I +L+DMY KCG ++D +F M ++DV+SW+
Sbjct: 496 SLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWST 553
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G QNG + EA+ F+ M KPN IT LGVL AC HAGLV E W F SM Y
Sbjct: 554 MIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLY 613
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G++P EHY CM+DLLG+A DD +LI EM +PD W ++L AC N L +
Sbjct: 614 GIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYA 673
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
A+++L P+D YV+LSN+YA W+ +++VR+ KK G K+ G SWIEV+
Sbjct: 674 AKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVN 728
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 55/290 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E ++ C ++++GK +H I G F N L++MY F L +A LFD+M +
Sbjct: 290 ELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPER 349
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N+VSWTTM++AY++ + + A+RL M G V PN F +S+VL+AC DL + +
Sbjct: 350 NVVSWTTMISAYSNAQLNDRAMRLLAFMFRDG-VMPNMFTFSSVLRACERLYDL---KQL 405
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS-- 183
H I + LE D + + L+D+Y K G L K+F + G+ +WNS+++
Sbjct: 406 HSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMT------GDSVVWNSIIAAF 459
Query: 184 -----GGKQVHAFCVKR--GFEKEDVTLTS------------------------------ 206
G + +H + R GF + TLTS
Sbjct: 460 AQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLIL 519
Query: 207 ---LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
L+DMY KCG ++D +FN M ++DV+SW+ +I G + + F++ AL
Sbjct: 520 NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ-NGFSMEAL 568
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 177/452 (39%), Gaps = 99/452 (21%)
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+E V + YS ++K C G + G+ +H I T L N L++MYVK
Sbjct: 276 MERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNL 335
Query: 156 L--TRKLFDQYS-----NWAA--SAYGNVALWNS-------MLSGG-------------- 185
L + LFD+ +W SAY N L + M G
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRA 395
Query: 186 -------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
KQ+H++ +K G E + ++LID+Y K GE+ + L +F M D V W I
Sbjct: 396 CERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSI 455
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I F Q+S
Sbjct: 456 IAA----------------------------FAQHSD----------------------- 464
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+EA+ L + G D T TS L+AC +L VH L ++ D I+
Sbjct: 465 -GDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL----KFDQDLIL 519
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+Y + G+++ A +F+R+ KKDV++WS +I G ++G + A LF M
Sbjct: 520 NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGP 579
Query: 419 DVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N I VL CS + G + G + ++D+ + ++DD +
Sbjct: 580 KPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMV 639
Query: 478 ALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAI 508
L M E DVV+W ++ C RA++ +
Sbjct: 640 KLIHEMNCEPDVVTWRTLLDAC----RARQNV 667
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/639 (29%), Positives = 316/639 (49%), Gaps = 90/639 (14%)
Query: 40 TGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG 99
T N ++S Y + A K+F++M ++++SW M++ Y N + A L+N M E
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD 152
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
V ++A+L + +G ++ R I +++ L + + N LL YV+ G +
Sbjct: 153 VVS-----WNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
R+LFD +W + WN ++ G Y++ +
Sbjct: 204 RRLFDSKMDW------EIVSWNCLMGG--------------------------YVRKKRL 231
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
DD +LF+ MP RD +SW +I G Y+ +L EAR+LF++
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITG---------------YAQNGLLSEARRLFEEL---- 272
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+V W +M+SG+V N +EA + + N +++N+
Sbjct: 273 --PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK-----------------NEVSWNA 313
Query: 338 RFALQVHGLIVTSGYEL-DYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVAW 390
A V + EL D + N ++ YA+ GN+ A LF +P++D ++W
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + G + A LF M +N+ ++ L C+ +A+L GKQ+H VK
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
GF+ I +L+ MY KCG I++ +F+ + E+D+VSW +I G ++G KEA+A
Sbjct: 434 AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ M + +KP+++T +GVLSAC H G V++ F SM YG+ + +HY CM+DLLG
Sbjct: 494 FESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG D+A L+ MPF PD W ++L A H +T+L AE++ P++ YV+
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVL 612
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
LSN+YA G W + ++R + G KK G SW+E+ +
Sbjct: 613 LSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQN 651
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 197/479 (41%), Gaps = 105/479 (21%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ + +I + N L+ Y L+DA LFD M ++ +SW M+T Y N +
Sbjct: 205 RLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSE 264
Query: 88 AIRLYNHMLEYGSVEP--NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A RL+ + P + F ++A++ +G LD RI E E + V N
Sbjct: 265 ARRLFEEL-------PIRDVFAWTAMVSGFVQNGMLDEA----TRIFEEMPEKNEVSWNA 313
Query: 146 LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVT 203
++ YV+ + R+LFDQ + N + WN+M++G
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPS------RNTSSWNTMVTG------------------- 348
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
Y +CG ID LF+ MP+RD +SW +I G
Sbjct: 349 -------YAQCGNIDQAKILFDEMPQRDCISWAAMISG---------------------- 379
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y + Q+EEA+ L + G ++
Sbjct: 380 ------------------------------YAQSGQSEEALHLFIKMKRDGGILNRSALA 409
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
AL +C + Q+HG +V +G++ YI G+ L+ +Y + G+++ A ++F +
Sbjct: 410 CALSSCAEIAAL--ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+KD+V+W+ +I G +HG A LF M + + + + VL CS + +G +
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKP-DDVTLVGVLSACSHTGFVDKGME 526
Query: 444 -VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
++ G T +ID+ + G +D+ L L K MP D +W G ++G +
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW-GALLGASR 584
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +++ GK LH R++K G GN LL+MY S+ +A +F+++ K+
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKD 470
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLI 127
IVSW TM+ Y + A+ L+ M +++P+ VL ACS +G +D G
Sbjct: 471 IVSWNTMIAGYARHGFGKEALALFESM--KMTIKPDDVTLVGVLSACSHTGFVDKGMEYF 528
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + + ++D+ + G L L S Y + A W ++L G +
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS---MPFYPDAATWGALL-GASR 584
Query: 188 VHA 190
+H
Sbjct: 585 IHG 587
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 302/609 (49%), Gaps = 32/609 (5%)
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ +W + + A+ L+ M + G + PN + VLKAC+ L ++IH
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSG-ITPNNSTFPFVLKACAKLSHLRNSQIIH 76
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+ + + + + +DMYVKCG +L D ++ + ++A WN+ML G Q
Sbjct: 77 AHVLKSCFQSNIFVQTATVDMYVKCG----RLEDAHNVFVEMPVRDIASWNAMLLGFAQS 132
Query: 189 HAF----CVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
C+ R G + VT+ LID L+ + A+++F GI
Sbjct: 133 GFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSF----------GIR 182
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+G + L+ YS C LC A LFD+ +S S V WNSMI+ Y E+
Sbjct: 183 IG-VHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRS----VVSWNSMIAAYANFEK 237
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+ +A+ + G D T + L +C+ + HG V G + D V
Sbjct: 238 HVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHG--VKLGCDSDVCVV 295
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ LI +Y++ G+V SA LF+ + K V+W+ +I + G S A LF M + +
Sbjct: 296 NTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEK 355
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ + +++ C +L GK + + + G + + +LIDMY KCG +D L
Sbjct: 356 PDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKEL 415
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F M R VVSWT +I C NG K+A+ F M++ +KPN ITFL VL AC H GLV
Sbjct: 416 FYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLV 475
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E F M +YG+ P ++HY CMVDLLG+ G +A ++I MPF+PD IW+++L
Sbjct: 476 ERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLS 535
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA 659
AC+ H ++ ++EQL P+ YV ++N+YA+ MW+ ++ +R+ K L +K+
Sbjct: 536 ACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKS 595
Query: 660 -GMSWIEVS 667
G S I+V+
Sbjct: 596 PGQSIIQVN 604
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 194/508 (38%), Gaps = 142/508 (27%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + ++ + +H ++K +IF + MY L DAH +F EM ++I
Sbjct: 60 LKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDI 119
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG----FMYSAVLKACSLSGDLDLGR 125
SW M+ + + + L HM G + P+ + ++L+ SL+ LG
Sbjct: 120 ASWNAMLLGFAQSGFLDRLSCLLRHMRLSG-IRPDAVTVLLLIDSILRVKSLT---SLGA 175
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS---------NWAASAYGN 174
+ I R + D + NTL+ Y KCG+L LFD+ + N +AY N
Sbjct: 176 VYSFGI-RIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYAN 234
Query: 175 -------VALWNSMLSGGKQ------------------------VHAFCVKRGFEKEDVT 203
V + ML GG VH+ VK G + +
Sbjct: 235 FEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCV 294
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT--------------------------- 236
+ +LI MY KCG++ LFN M ++ VSWT
Sbjct: 295 VNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGE 354
Query: 237 --------GIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARK 268
+I GC + L +AL+DMY+ C +A++
Sbjct: 355 KPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKE 414
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LF A V W +MI+ LN ++A+ L + GM + TF + L+A
Sbjct: 415 LF------YTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQA 468
Query: 329 CINLLNFNSRFALQVHGLIVTSGYE--------------LDYIVGSNLIDLYARLGNVKS 374
C HG +V G E +D+ S ++DL R G+++
Sbjct: 469 C-------------AHGGLVERGLECFNMMTQKYGINPGIDHY--SCMVDLLGRKGHLRE 513
Query: 375 ALELFHRLP-KKDVVAWSGLIMGCTKHG 401
ALE+ +P + D WS L+ C HG
Sbjct: 514 ALEIIKSMPFEPDSGIWSALLSACKLHG 541
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 18/240 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ I+ L C Q +++ G +H +K G D+ N L+ MY+ ++ A LF
Sbjct: 256 DISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLF 315
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M+ K VSWT M++AY + A+ L+N M E +P+ A++ C +G L
Sbjct: 316 NGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAM-EAAGEKPDLVTVLALISGCGQTGAL 374
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+LG+ I L+ + V+ N L+DMY KCG ++LF +N V W
Sbjct: 375 ELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMAN------RTVVSWT 428
Query: 180 SMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++ ++ ++ G + +T +++ G ++ GL FN M ++
Sbjct: 429 TMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQK 488
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 253/426 (59%), Gaps = 12/426 (2%)
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
GC + F + L++MY + LC+A KLFD+ N + ++I GY + +
Sbjct: 69 GCLDL--FAWNILLNMYVKSDFLCDASKLFDEMPE------RNTISFVTLIQGYAESVRF 120
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI L +H + + +TF S L+AC + N Q+H ++ G D V +
Sbjct: 121 LEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLN--LGNQIHCHVIKIGLHSDVFVSN 177
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+D+YA+ G +++++ELF P ++ V W+ +I+G + G A LF +M+
Sbjct: 178 ALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQA 237
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ SS L+ C+ LA+L G Q+H+ VK F+K+ + +LIDMY KCG I D +F
Sbjct: 238 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 297
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M ++D VSW +I G +G +EA+ F +M ++ +KP+++TF+GVLSAC +AGL++
Sbjct: 298 DLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLD 357
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ FTSM ++G+EP +EHY CMV LLG+ G D A +LI E+PF+P +W ++L A
Sbjct: 358 QGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C HN+ +L I A+++L P+D + +V+LSN+YAT WD+++ VRK K+ G KK
Sbjct: 418 CVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 477
Query: 660 GMSWIE 665
G+SWIE
Sbjct: 478 GLSWIE 483
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 180/439 (41%), Gaps = 108/439 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C Q+ +GK LHC I+K G D+F N LL+MY L DA KLFDEM +N
Sbjct: 44 ALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERN 103
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+S+ T++ Y + R AI L+ + + V PN F +++VL+AC+ L+LG IH
Sbjct: 104 TISFVTLIQGYAESVRFLEAIELFVRL--HREVLPNQFTFASVLQACATMEGLNLGNQIH 161
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + L D + N L+D+Y KCG + + +A S + N WN+++ G
Sbjct: 162 CHVIKIGLHSDVFVSNALMDVYAKCGRMENSM----ELFAESPHRNDVTWNTVIVGHVQL 217
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
G Q+H+ VK F+K+ V
Sbjct: 218 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 277
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+LIDMY KCG I D +F+ M ++D VSW +I G
Sbjct: 278 NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISG----------------------- 314
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y ++ EA+ + + + + D TF
Sbjct: 315 -----------------------------YSMHGLGREALRIFDKMQETEVKPDKLTFVG 345
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L AC N LL+ + +I G E + ++ L R G++ A++L +
Sbjct: 346 VLSACANAGLLDQGQAY---FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI 402
Query: 383 P-KKDVVAWSGLIMGCTKH 400
P + V+ W L+ C H
Sbjct: 403 PFQPSVMVWRALLGACVIH 421
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S + N ++ L+ C RGK +H +KRG + L++MY+K + D
Sbjct: 32 SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCD 91
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
LF MPER+ +S+ +I G ++ R EAI F + + L PN+ TF VL AC
Sbjct: 92 ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACAT 150
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
+ I + + GL + ++D+ + G +++ +L AE P + D T W
Sbjct: 151 MEGLNLGNQIHCHV-IKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT-WN 208
Query: 596 SML 598
+++
Sbjct: 209 TVI 211
>gi|413944451|gb|AFW77100.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 678
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/697 (28%), Positives = 323/697 (46%), Gaps = 103/697 (14%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS S+H IK G F NNLL Y DA +LFDEM R+N+VSW+ ++
Sbjct: 20 RSGGNPHSVHGVAIKLGCIVSTFLCNNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVI 79
Query: 77 TAYTSNKRPNWAIRLYNHMLE---YGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+ + A L++HML +GS + P+ F A++ CS + D+D G +H +
Sbjct: 80 SGSAHHGVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVA 139
Query: 133 REKLEYDTVLMNTLLDMYVKCG-----------SLTRKLFDQYS------NWAASAYGNV 175
+ ++ D + L+DMY KCG + R + S N +S Y +
Sbjct: 140 KFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDT 199
Query: 176 AL-----------WNS---------------MLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+L W + +LS G Q+H +K G E + T+L+
Sbjct: 200 SLLLFKKMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMT 259
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY +CG +D+ +P + C R
Sbjct: 260 MYGRCGGVDE-------IPR--------------------------------LACRIRH- 279
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
A AL + Y N EAI + + M ID T L+ C
Sbjct: 280 ---------DALSRTAL----LGAYARTGYNAEAIGVFKEMIMKNMAIDQSAMTGMLQVC 326
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ R QVH + + ++LD ++ + I +Y R G++ SA +F+ + + D+++
Sbjct: 327 SSFGQL--RMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEENDIIS 384
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ L+ T++GL+ L FR M+ F I+SVL+ S +++L G Q+H+ +
Sbjct: 385 WTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSRTL 444
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G + ++ +L+ +Y CG + L +F M RD+V+W ++ Q+G AI
Sbjct: 445 KLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVAAIQ 504
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F M + + P+ TF+G+LS+C GLV+E F MK +Y LEP + HY CMVDLL
Sbjct: 505 LFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMVDLL 564
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+AG F DA I MP++PD+ +W ++L +C+ H N L I A+++L +P D S Y+
Sbjct: 565 ARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGLGRIAAKKILEITPHDYSAYI 624
Query: 630 MLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIE 665
+LS+++A++ MWD R + K G SWI+
Sbjct: 625 ILSSIHASVDMWDEKYWNRTVFDTQRARKDTGRSWID 661
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 221/534 (41%), Gaps = 99/534 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + R + G +H + K+G+ +D L+ MYA ++ + + F +++++SW
Sbjct: 122 CSRARDVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSW 181
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ + + ++ L+ ML V P YS +LK L +G +H
Sbjct: 182 TSMIACLVNQGSSGYYDTSLLLFKKMLAL-KVWPTNATYSCILKVFDTPDLLSVGMQLHG 240
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG---------------SLTRK-LFDQY--SNWAASA 171
+ + E DT L L+ MY +CG +L+R L Y + + A A
Sbjct: 241 CLLKMGTEVDTALGTALMTMYGRCGGVDEIPRLACRIRHDALSRTALLGAYARTGYNAEA 300
Query: 172 YG--------NVALWNSMLSGG-------------KQVHAFCVKRGFEKEDVTLTSLIDM 210
G N+A+ S ++G +QVH + +K F+ + + L + I +
Sbjct: 301 IGVFKEMIMKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITV 360
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
Y +CG+I+ +F M E D++SWT ++ +C+T + L
Sbjct: 361 YGRCGDINSAETVFYLMEENDIISWTALL------TCYTQNGL----------------- 397
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+EE + + G+ + TS L+A
Sbjct: 398 -----------------------------DEEVLLFFRKMLRKGLGSPVFCITSVLRASS 428
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
++ N LQ+H + G + D V + L+ LYA G+V+ AL++F+ + +D+V W
Sbjct: 429 SISNLA--VGLQIHSRTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTW 486
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCV 449
+ L+ ++HG A LF M + + +L CS + ++ G + +
Sbjct: 487 NALLTSFSQHGSEVAAIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKE 546
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
K E + + T ++D+ + G D + MP E D + W ++ C +G
Sbjct: 547 KYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHG 600
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 43/323 (13%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
GQ R ++Q +HC +K D N +++Y +N A +F M +I+SWT
Sbjct: 330 GQLRMVRQ---VHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEENDIISWT 386
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
++T YT N + + ML G P F ++VL+A S +L +G IH R +
Sbjct: 387 ALLTCYTQNGLDEEVLLFFRKMLRKGLGSPV-FCITSVLRASSSISNLAVGLQIHSRTLK 445
Query: 134 EKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQ 187
++ D + N L+ +Y CGS + K+F+ SN ++ WN++L+ G +
Sbjct: 446 LGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSN------RDIVTWNALLTSFSQHGSE 499
Query: 188 VHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
V A + ++E + T L+ + G + +G FN M E+ + + C
Sbjct: 500 VAAIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTC 559
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------WAA-----SAYGNVALWNSMI 291
+VD+ + C+A D W A +GN+ L
Sbjct: 560 ----------MVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGLGRIAA 609
Query: 292 SGYV-LNEQNEEAITLLSHIHSS 313
+ + + A +LS IH+S
Sbjct: 610 KKILEITPHDYSAYIILSSIHAS 632
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I LR ++ G +H R +K G+ D N L+++YA+ S+ A K+F+ M+
Sbjct: 420 ITSVLRASSSISNLAVGLQIHSRTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMS 479
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
++IV+W ++T+++ + AI+L++ M E G + P+ + + +L +CS G + G
Sbjct: 480 NRDIVTWNALLTSFSQHGSEVAAIQLFDLMQEEG-ICPDAYTFVGLLSSCSRMGLVKEGC 538
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+E + LE V ++D+ + G
Sbjct: 539 EYFNEMKEKYNLEPKMVHYTCMVDLLARAG 568
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 315/656 (48%), Gaps = 109/656 (16%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY--- 164
+VL+ C+ S L G+ + I D+ L + L MY CG L ++FDQ
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE 158
Query: 165 ---------SNWAASA--YGNVALWNSMLS------------------------GGKQVH 189
+ A S G++ L+ M+S GG+Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLH 218
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------- 241
+ +K GF + + SL+ YLK +D +F+ M ERDV+SW II G
Sbjct: 219 GYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 242 -----------------------------------------CFEC-SCFT-----LSALV 254
CF +CF+ + L+
Sbjct: 279 KGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLL 338
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMYS C L A+ +F + S + +Y SMI+GY EA+ L + G
Sbjct: 339 DMYSKCGDLDSAKVVFREMSGRSVVSY------TSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 315 MCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ D YT T+ L C LL+ R VH I + D V + L+D+YA+ G++
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKR----VHEWIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKV 431
+ A +F + KD+++W+ +I G +K+ + A LF ++ + ++ ++ VL
Sbjct: 449 REAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPA 508
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ L++ +G+++H + ++ G+ + SL+DMY KCG + LF + +D+VSW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSW 568
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I G G +G KEAIA F +M Q+ ++P+EI+F+ +L AC H+GLV+E W F M+
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
E +EP +EHY C+VD+L + G A + I MP PD TIW ++L C H++ KL
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+AE++ PE+ YV+++N+YA W+ + ++RK G++ K G SWIE+
Sbjct: 689 RVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEI 744
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%)
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ D++ + SVL++C+ SL+ GK+V F GF + + L MY CG++
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDL 145
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+ +F + + W ++ ++G +I F++M+ S ++ + TF
Sbjct: 146 KEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 311/632 (49%), Gaps = 88/632 (13%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS 165
+S +L C+ S +H I + +T + N L+D+Y KCG + RKLFD+
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 166 NWAASAYGNVALWNSMLSGGKQ-------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
N+ WNS++ + VH F ++ + + + S+I + + G D
Sbjct: 82 E------RNIFSWNSIICAFTKSGFLDDAVHIF--EKMPQVDQCSWNSMISGFEQHGRFD 133
Query: 219 DGLALFNFMPERDVV----SWTGIIVGC--------------------FECSCFTLSALV 254
+ L F M + S+ + C + + SALV
Sbjct: 134 EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALV 193
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMYS C + A+ +FD+ + + + WNS+I+ Y N +EA+ + + G
Sbjct: 194 DMYSKCGRVEYAQSVFDEMTVRSRVS------WNSLITCYEQNGPVDEALKIFVEMIKCG 247
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT-SGYELDYIVGSNLIDLYARLGNVK 373
+ D T S + AC + Q+H +V + D I+G+ L+D+YA+ +
Sbjct: 248 VEPDEVTLASVVSACATISAIKE--GQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
Query: 374 SALELFHRLP-------------------------------KKDVVAWSGLIMGCTKHGL 402
A +F +P KDV+ W+ LI GCT++G
Sbjct: 306 EARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGE 365
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKED 457
N A +LFR + + + ++L C+ LA L+ G+Q H+ +K GF E D
Sbjct: 366 NEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSD 425
Query: 458 ITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ + SLIDMY+KCG +++G +F+ M E+D VSW +IVG QNG +A+ F +M++
Sbjct: 426 VFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLE 485
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
S P+ +T +GVL AC HAGL++E F SM ++GL P +HY CMVDLLG+AG +
Sbjct: 486 SGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLE 545
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+A+ LI EM +PD +W S+L AC+ H N +L + ++LL PE+ YV+LSN+YA
Sbjct: 546 EAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYA 605
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
W ++ +VRK ++ G K+ G SWIE+
Sbjct: 606 ENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQ 637
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 137/574 (23%), Positives = 245/574 (42%), Gaps = 114/574 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + RS + +H IIK + + F N L+ +Y ++ A KLFD M +NI
Sbjct: 26 LNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNI 85
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE-------------------------YGSVEPN 104
SW +++ A+T + + A+ ++ M + + + +
Sbjct: 86 FSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGH 145
Query: 105 GFM-----YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
GF+ + + L AC+ DL LG IH + R D + + L+DMY KCG +
Sbjct: 146 GFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYA 205
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLS---------------------------------- 183
+ +FD+ + + + WNS+++
Sbjct: 206 QSVFDEMTVRSRVS------WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259
Query: 184 ----------GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDV 232
G+Q+HA VK + D+ L +L+DMY KC I++ +F+ MP R V
Sbjct: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
VS T ++ G Y+ + + AR +F +V WN++I+
Sbjct: 320 VSETSMVSG---------------YAKASKVKVARYMFSNM------MVKDVITWNALIA 358
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
G N +NEEA+ L + + YTF + L AC NL + + Q H ++ G+
Sbjct: 359 GCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADL--QLGRQAHSHVLKHGF 416
Query: 353 ELDY------IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
Y VG++LID+Y + G+V++ +F + +KD V+W+ +I+G ++G + A
Sbjct: 417 RFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKA 476
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLID 465
+F M+ S + + + VL CS L G+ + + G T ++D
Sbjct: 477 LEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVD 536
Query: 466 MYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + G +++ L + M + D + W ++ C
Sbjct: 537 LLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAAC 570
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 198/512 (38%), Gaps = 160/512 (31%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + +K G +H + + D++ G+ L+ MY+ + A +FDEM ++
Sbjct: 157 ALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRS 216
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW +++T Y N + A++++ M++ G VEP+ ++V+ AC+ + G+ IH
Sbjct: 217 RVSWNSLITCYEQNGPVDEALKIFVEMIKCG-VEPDEVTLASVVSACATISAIKEGQQIH 275
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------QYSNWAASAYG 173
R+ + ++ D +L N LLDMY KC + R +FD S +A ++
Sbjct: 276 ARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKV 335
Query: 174 NVA-------------LWNSMLSG------------------------------------ 184
VA WN++++G
Sbjct: 336 KVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNAC 395
Query: 185 --------GKQVHAFCVKRGF-----EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPER 230
G+Q H+ +K GF E DV + SLIDMY+KCG +++G +F M E+
Sbjct: 396 ANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEK 455
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D VSW +IVG +A + +GN
Sbjct: 456 DCVSWNAMIVG----------------------------------YAQNGFGN------- 474
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN---FNSRFALQVHG 345
+A+ + + SG D T L AC LL+ + R HG
Sbjct: 475 -----------KALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHG 523
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH---- 400
L+ + + ++DL R G ++ A L + + D + W L+ C H
Sbjct: 524 LMPLKDHY------TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQ 577
Query: 401 -------------GLNSLAYLLFRDMINSNQD 419
NS Y+L +M N+D
Sbjct: 578 LGEYVVKKLLEVDPENSGPYVLLSNMYAENRD 609
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 288/563 (51%), Gaps = 69/563 (12%)
Query: 143 MNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
+ TLLDM + T+ L + S+ A + G V G++VH+F VK G
Sbjct: 43 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAV---------GRKVHSFVVKLGLGSCV 93
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
S+++MY KCG+ + +F MP R V SW +A+V + ++
Sbjct: 94 PVANSVLNMYGKCGDSETATTVFERMPVRSVSSW---------------NAMVSLNTHLG 138
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCIDSY 320
+ A LF+ ++ WN+MI+GY N + +A+ L S +H S M D +
Sbjct: 139 RMDLAESLFESMPD------RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF 192
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIV--------------TSGY-------------- 352
T TS L AC NL N R QVH I+ S Y
Sbjct: 193 TITSVLSACANLGNV--RIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 250
Query: 353 -----ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+L+ I + L++ Y ++G+++SA E+F + +DVVAW+ +I+G ++G N A
Sbjct: 251 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 310
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LFR MI + N + +++VL VC+ LA L GKQ+H ++ E+ ++I MY
Sbjct: 311 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 370
Query: 468 LKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+ G +F + ++ ++WT +IV Q+G+ +EA+ F+EM+++ ++P+ IT+
Sbjct: 371 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITY 430
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+GVLSAC HAG V E + +K E+ + P + HY CMVDLL +AG F +A++ I MP
Sbjct: 431 VGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP 490
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+PD W S+L AC H N +L + AE+LL+ P + Y ++NVY+ G W ++
Sbjct: 491 VEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAAR 550
Query: 647 VRKAGK-KLGEKKAGMSWIEVSS 668
+ KA K K K+ G SW + S
Sbjct: 551 IWKARKEKAVRKETGFSWTHIRS 573
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/568 (22%), Positives = 231/568 (40%), Gaps = 126/568 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD--------------- 50
+ L C ++ G+ +H ++K GL + N++L+MY
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 51 ---------FTSLND-------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
SLN A LF+ M ++IVSW M+ Y N A++L++
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
ML S+ P+ F ++VL AC+ G++ +G+ +H I R ++ Y++ + N L+ Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
S+ R++ DQ SM + + ++ T+L++ Y+
Sbjct: 241 SVENARRIMDQ----------------SMET--------------DLNVISFTALLEGYV 270
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
K G+++ +F M RDVV+WT +IVG
Sbjct: 271 KIGDMESAREMFGVMNNRDVVAWTAMIVG------------------------------- 299
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
Y N +N+EAI L + + G +SYT + L C +L
Sbjct: 300 ---------------------YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 338
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
+ + Q+H + S E V + +I +YAR G+ A +F ++ +K+ + W+
Sbjct: 339 ACLD--YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 396
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH-AFCVK 450
+I+ +HG A LF +M+ + + ++ VL CS + GK+ + +
Sbjct: 397 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 456
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIA 509
E ++D+ + G + + MP E D ++W ++ C + A+ A
Sbjct: 457 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAEL 516
Query: 510 YFQEMIQSRLKPNE----ITFLGVLSAC 533
++++ + PN V SAC
Sbjct: 517 AAEKLLS--IDPNNSGAYSAIANVYSAC 542
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
++A+ G + A +F +P++D V+W+ +++G + G A DM QF
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE------------ 472
+++VL C+ + G++VH+F VK G S+++MY KCG+
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 473 -------------------IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+D +LF+ MP+R +VSW +I G QNG +A+ F
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 514 MI-QSRLKPNEITFLGVLSACRHAGLV 539
M+ +S + P+E T VLSAC + G V
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNV 207
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/684 (28%), Positives = 316/684 (46%), Gaps = 82/684 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C ++ GK +H R+ L D+ N ++ MY + A +F EM ++
Sbjct: 17 LEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERD 76
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SW + A + + + L M G + P+ + + L AC S L GRLIH
Sbjct: 77 LISWNNAIAANAESGDYTFTLALLKSMQLEG-MAPDKVTFVSALNACIGSRSLSNGRLIH 135
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM----- 181
+ +E D VL L+ MY +CG L R++F + NV WN+M
Sbjct: 136 ALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPER------NVVSWNAMVASCT 189
Query: 182 ----------------------------------------LSGGKQVHAFCVKRGFEKED 201
L+ G+++H +R +
Sbjct: 190 LNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQI 249
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+L+ MY +CG + D +F+ M RD+VSW +A++ Y+
Sbjct: 250 EVANALVTMYGRCGGVGDAERVFSAMERRDLVSW---------------NAMISAYAQSG 294
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ CE LF + + + A +V WN+MI+GYV A+++ + G+ + T
Sbjct: 295 LACEVVNLFHRMRAERSMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVT 354
Query: 322 FTSALKACINLLNFNSRFALQ----VHGLIVTSGYEL--DYIVGSNLIDLYARLGNVKSA 375
F S L C +SR L+ +H ++ EL D IV + ++++Y + G + +A
Sbjct: 355 FMSLLSVC------DSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTA 408
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
LF +++ +W+ +I HG A+ L M ++ ++L C
Sbjct: 409 RHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAG 468
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
++R+GK +HA + G EK+ + +L++ Y KCG +D +LF + RDVVSW GII
Sbjct: 469 GAVRQGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGII 528
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G NG A+EA+ M Q ++P+ ITFL +LSA HAG + + F SM ++ L
Sbjct: 529 AGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHEL 588
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
E +EHY CM+DLLG+AG +AE ++ M + + W ++L ACE H + + +A
Sbjct: 589 ERGVEHYGCMIDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAG 648
Query: 616 QLLATSPEDPSKYVMLSNVYATLG 639
++ +P+ S YV LSN+YAT G
Sbjct: 649 SIVEMNPQHSSAYVALSNLYATCG 672
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 243/555 (43%), Gaps = 64/555 (11%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C RS+ G+ +H +++ G+ D+ G L++MY L A ++F M
Sbjct: 116 VSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPE 175
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+VSW MV + T N AI L+ M+ VEP + VL A + L GR
Sbjct: 176 RNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRR 235
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
IHE I +L + N L+ MY +CG + D ++A ++ WN+M+S
Sbjct: 236 IHEMIQERQLLSQIEVANALVTMYGRCGGVG----DAERVFSAMERRDLVSWNAMISAYA 291
Query: 187 Q----------VHAFCVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPERDV--- 232
Q H +R DV + ++I Y++ G+ L++F M +
Sbjct: 292 QSGLACEVVNLFHRMRAERSMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGN 351
Query: 233 -VSWTGIIVGC----------------------FECSCFTLSALVDMYSNCNVLCEARKL 269
V++ ++ C +A+V+MY C L AR L
Sbjct: 352 QVTFMSLLSVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHL 411
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F+ S + N+A WNSMIS Y L+ + E+A L + G+ D TF + L AC
Sbjct: 412 FEDTS------HRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNAC 465
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ R +H I+ SG E D +V + L++ Y++ GN+ +A LF L +DVV+
Sbjct: 466 V--AGGAVRQGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVS 523
Query: 390 WSGLIMGCTKHG-----LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR-GKQ 443
W+G+I G +G L S+ +L+ +D + D F+ ++L S LR+ G
Sbjct: 524 WNGIIAGFAHNGHAREALKSM-WLMQQDGVRP--DAITFL--TILSASSHAGFLRQGGDD 578
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV-VSWTGIIVGC---G 499
+ V E+ +ID+ + G I + M + D VSW ++ C G
Sbjct: 579 FVSMAVDHELERGVEHYGCMIDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTLLSACEVHG 638
Query: 500 QNGRAKEAIAYFQEM 514
RAK EM
Sbjct: 639 DEERAKRVAGSIVEM 653
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 8/283 (2%)
Query: 321 TFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
TF + L+AC L + +V L + E D V + ++ +Y + A+ +
Sbjct: 12 TFLALLEACDSPEFLEDGKQIHARVSALQL---LESDVPVANAVMGMYRKCERADLAMAV 68
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F + ++D+++W+ I + G + L + M ++ S L C SL
Sbjct: 69 FSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSL 128
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
G+ +HA ++RG E + + T+L+ MY +CG ++ +F MPER+VVSW ++ C
Sbjct: 129 SNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASC 188
Query: 499 GQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
N EAI F+ M+ + ++P ++F+ VL+A + E I M E L
Sbjct: 189 TLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIH-EMIQERQLLS 247
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+E +V + G+ G DAE++ + M + D W +M+ A
Sbjct: 248 QIEVANALVTMYGRCGGVGDAERVFSAME-RRDLVSWNAMISA 289
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCG 471
M S+ D N+ ++L+ C L GKQ+HA + D+ + +++ MY KC
Sbjct: 1 MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
D +A+F M ERD++SW I ++G +A + M + P+++TF+ L+
Sbjct: 61 RADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALN 120
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC + + I ++ E G+E + +V + G+ GC + A ++ MP + +
Sbjct: 121 ACIGSRSLSNGRLIH-ALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPER-NV 178
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
W +M+ +C + + + ++++A + +P++ ++ V + ++L++ R+
Sbjct: 179 VSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFIT-VLNAVTTREALAEGRRIH 237
Query: 652 KKLGEKKAGMSWIEVSS 668
+ + E++ +S IEV++
Sbjct: 238 EMIQERQL-LSQIEVAN 253
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 318/684 (46%), Gaps = 102/684 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL++C S QG+ LH ++K GL + F N+L++MYA S+ DA LFD
Sbjct: 275 LVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACP 331
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N +S MV Y + + A +L++ M + G V Y+ ++
Sbjct: 332 TLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVS-----YTTMIMG----------- 375
Query: 126 LIHERITREKLEY------DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L+ RE LE D V+ N L + V +A S +G +
Sbjct: 376 LVQNECFREALEVFKDMRSDGVVPNDLTLVNVI--------------YACSHFGEIL--- 418
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ +HA +K E + T+L+ Y C + + LF+ MPE ++VSW ++
Sbjct: 419 ----NCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVML 474
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
G + + LVDM AR+LF++ +V W +MI GY+L +
Sbjct: 475 NG------YAKAGLVDM---------ARELFERVPD------KDVISWGTMIDGYILMNR 513
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EA+ + + SG+ ++ + + AC L + Q+HG++V G++ +
Sbjct: 514 LHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGW--QLHGMVVKKGFDCYNFIQ 571
Query: 360 SNLIDLYARLGN-------------------------------VKSALELFHRLPKKDVV 388
+ +I YA G V A ++F +P++DV
Sbjct: 572 TTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVF 631
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+WS +I G + + +A LF M+ S N+ + SV + L +L+ G+ H +
Sbjct: 632 SWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYI 691
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER--DVVSWTGIIVGCGQNGRAKE 506
D +LIDMY KCG I+ L F + ++ V W II G +G A
Sbjct: 692 CNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASM 751
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
+ F +M + +KPN ITF+GVLSAC HAGLVE IF MK Y +EP ++HY CMV
Sbjct: 752 CLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMV 811
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AG ++AE++I MP K D IW ++L AC TH + + AE L +P
Sbjct: 812 DLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGG 871
Query: 627 KYVMLSNVYATLGMWDSLSKVRKA 650
V+LSN+YA G W+ +S VR+A
Sbjct: 872 GKVLLSNIYADAGRWEDVSLVRRA 895
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 65/238 (27%)
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM--------------- 466
+ + S LK CS S +G+Q+H+ +K G SLI+M
Sbjct: 272 ELALVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFD 328
Query: 467 ----------------YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
Y K G++D+ LF MP++ VS+T +I+G QN +EA+
Sbjct: 329 ACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEV 388
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAG---------------LVEEAWTIFTSMKPEYGL 555
F++M + PN++T + V+ AC H G VE + T++ Y L
Sbjct: 389 FKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCL 448
Query: 556 ---------------EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E +L + M++ +AG D A +L +P K D W +M+
Sbjct: 449 CSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDK-DVISWGTMI 505
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 294/592 (49%), Gaps = 46/592 (7%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
+ +LK C DL G+ +H + + T N + +Y KCG L RK F S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 166 NWAASAYGNVALWNSMLSG-GKQVHAFCVKRGF----EKEDVTLTSLIDMYLKCGEIDDG 220
+ NV +N++++ K+ + F E + V+ +LI Y CGE
Sbjct: 71 D------PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 221 LALFNFMPER----DVVSWTGIIVGC------------------FECSCFTLSALVDMYS 258
L LF+ M E D + + +I C F+ +AL+ Y
Sbjct: 125 LGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L +A+++F + + WNSMI Y +++ +A+ L + G+ +D
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALE 377
+T S L A L + + LQ HG ++ +G+ + VGS LIDLY++ G + +
Sbjct: 240 MFTLASVLTAFTCLEDLSG--GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHG-LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + + D+V W+ ++ G +++ A FR M N V+ CS L+
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLS 357
Query: 437 SLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S +GKQ+H+ +K I++ +LI MY KCG + D LF M E + VS +I
Sbjct: 358 SPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMI 417
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+G E++ FQ M++ ++ P ITF+ VLSAC H G VEE W F MK ++ +
Sbjct: 418 AGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNI 477
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP EHY CM+DLLG+AG +AE LIA MPF P WAS+L AC TH N +L A
Sbjct: 478 EPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAAN 537
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
Q+L P + + YV+LSN+YA+ G W+ ++ VRK + G +KK G SWIEV
Sbjct: 538 QVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 256/596 (42%), Gaps = 77/596 (12%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD----------FT 52
L+R L+ C R + GKSLH IK + + N+ + +Y+ F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 53 SLND---------------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRL 91
++D AH+LFD++ ++VS+ T+++AY A+ L
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
++ M E G ++ +GF SAV+ AC D+ L +H + + N LL Y
Sbjct: 128 FSGMREMG-LDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAF--CVKRGFEKE 200
K G L +++F + + WNSM+ G K + F V+RG +
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TL S++ + ++ GL +I F + S L+D+YS C
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHG-----------QLIKTGFHQNSHVGSGLIDLYSKC 288
Query: 261 -NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCID 318
+ + RK+F++ + ++ LWN+M+SGY NE+ E+A+ + G +
Sbjct: 289 GGGMSDCRKVFEEITE------PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPN 342
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALE 377
+F + AC NL + + Q+H L + S + I V + LI +Y++ GN++ A
Sbjct: 343 DCSFVCVISACSNLSSPSQ--GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
LF R+ + + V+ + +I G +HG+ + LF+ M+ SVL C+
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460
Query: 438 LRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
+ G + K E E + +ID+ + G++ + L MP + W ++
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC-RHAGLVEEAWTIFTSMK 550
C +G + A+ +++Q L+P+ VLS AG EE T+ M+
Sbjct: 521 GACRTHGNIELAVKAANQVLQ--LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMR 574
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 30/243 (12%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS 71
C S QGK +H +K + S I N L++MY+ +L DA +LFD MA N VS
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS 412
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG----RLI 127
+M+ Y + ++ L+ MLE + P + +VL AC+ +G ++ G ++
Sbjct: 413 LNSMIAGYAQHGIEMESLHLFQWMLER-QIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYS-NWAA-----SAYGN 174
E+ +E + + ++D+ + G L+ R F+ S WA+ +GN
Sbjct: 472 KEKFN---IEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+ L + QV L +MY G ++ + FM +R V
Sbjct: 529 IEL---AVKAANQVLQLEPSNA-----APYVVLSNMYASAGRWEEVATVRKFMRDRGVKK 580
Query: 235 WTG 237
G
Sbjct: 581 KPG 583
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 304/573 (53%), Gaps = 39/573 (6%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN 166
+ +L+ CS +G D G +H +D ++ N L+DMY KC L +FD+
Sbjct: 8 AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67
Query: 167 WAASAYGNVALWNSMLSG------GKQVHAFCVKRGF---EKEDVTLTSLIDMYLKCGEI 217
NV W +++ G K A + G+ + + T ++ + G +
Sbjct: 68 R------NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
++G+ + M + W ++ +A +DMYS C + A ++F++
Sbjct: 122 ENGMQIHG-MCVKSGFEWVSVVG----------NATIDMYSKCGRIGMAEQVFNKMP--- 167
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ N+ WN+MI+G+ +++ L + G D +TFTS LKAC L
Sbjct: 168 ---FRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAI-- 222
Query: 338 RFALQVHGLIVTSGYELDY--IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
R Q+H ++T G+ + I+ S ++DLYA+ G + A ++F R+ +K++++WS LI
Sbjct: 223 RGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQ 282
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G + G A LFR + S +V+ F++S ++ V + LA + +GKQ+H + +K
Sbjct: 283 GFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGL 342
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ S+IDMYLKCG ++ LF M R+VVSWT +I G G++G ++AI F M
Sbjct: 343 DISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQ 402
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
++ +E+ +L +LSAC H+GL+ E+ F+ + + ++P++EHY CMVD+LG+AG
Sbjct: 403 LDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQL 462
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+A+ LI M KP++ IW ++L AC H N ++ + E L ++P YVM+SN+Y
Sbjct: 463 KEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIY 522
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
A G W +VRK K G +K+AG SW+E++
Sbjct: 523 AEAGYWKECERVRKLVKAKGLKKEAGQSWVEIN 555
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 217/544 (39%), Gaps = 146/544 (26%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+R+ + LR+C + QG +H + G D+ N+L+ MY + ++ A +FD
Sbjct: 5 QRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDR 64
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M +N+VSWT ++ Y ++ L M Y V+PN F +S LKAC G ++
Sbjct: 65 MLERNVVSWTALMCGYLQEGNAKGSLALLCEM-GYSGVKPNEFTFSTSLKACGALGVVEN 123
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSM 181
G IH + E+ +V+ N +DMY KCG + ++F++ + N+ WN+M
Sbjct: 124 GMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKM------PFRNLVSWNAM 177
Query: 182 LS--------------------------------------------GGKQVHAFCVKRGF 197
++ GG Q+HA + RGF
Sbjct: 178 IAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGF 237
Query: 198 --EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE----------- 244
++ ++++D+Y KCG + + +F+ + +++++SW+ +I G +
Sbjct: 238 PISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLF 297
Query: 245 ---------CSCFTLSALVDMYSN-----------------------------------C 260
F LS ++ ++++ C
Sbjct: 298 RQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKC 357
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ EA +LF + NV W MI+GY + E+AI L + + G+ +D
Sbjct: 358 GLTEEAERLFSEMQ------VRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEV 411
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-----------LIDLYARL 369
+ + L AC + GLI S + ++ ++D+ R
Sbjct: 412 AYLALLSACSH------------SGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRA 459
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG----LNSLAYLLFRDMINSNQDVNQFI 424
G +K A L + K + W L+ C HG + +LFR ++++ VN +
Sbjct: 460 GQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFR--MDTDNPVNYVM 517
Query: 425 ISSV 428
+S++
Sbjct: 518 MSNI 521
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
++ +L+ CS +G QVHA V GF + I LIDMY KC +D ++F M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ER+VVSWT ++ G Q G AK ++A EM S +KPNE TF L AC G+VE
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
I M + G E +D+ + G AEQ+ +MPF+ + W +M+ A TH
Sbjct: 127 IH-GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMI-AGHTH 183
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
S++ Q + E P ++ S + A
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKA 215
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 289/587 (49%), Gaps = 64/587 (10%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A RL HM + + F+ + +L + SG+L R + ++++R D N +L
Sbjct: 41 AKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRR----DVFSWNAML 96
Query: 148 DMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK---RGFEKEDV 202
Y K G++ R +FDQ S A +Y V S Q F V+ GFE D
Sbjct: 97 SAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDY 156
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T S++ + +I G + I+ S F +AL +MY+ C
Sbjct: 157 THVSVLHACSQLLDIKRGKQIHG-----------RIVATSLGESVFVWNALTNMYAKCGA 205
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L +AR LFD+ + NV WNSMISGY+ N Q E L + SSG+ D T
Sbjct: 206 LDQARWLFDRMVN------KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI 259
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
SN++ Y + G + A + F +
Sbjct: 260 -------------------------------------SNILSAYFQCGYIDEACKTFREI 282
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
+KD V W+ +++GC ++G A LLFR+M+ N + F ISSV+ C+ LASL +G+
Sbjct: 283 KEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQ 342
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
VH V G + + + ++L+DMY KCGE D +FK M R+V+SW +I+G QNG
Sbjct: 343 AVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNG 402
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ EA+A ++EM+ LKP+ ITF+GVLSAC HAGLVE F S+ +G+ P +HY
Sbjct: 403 KDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHY 462
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CM++LLG+AG D A LI M F+P+ IW+++L C + + + A L P
Sbjct: 463 SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDP 522
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+ Y+MLSN+YA G W ++ VR K KK A SWIE+ +
Sbjct: 523 HNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDN 569
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 199/499 (39%), Gaps = 137/499 (27%)
Query: 10 LRHCGQRRSIKQGKSLHCRI-IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C + + Q K L + + D F N LL +YA +L+DA LFD+M+R++
Sbjct: 29 LLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRD 88
Query: 69 IVSWTTMVTAYTS-------------------------------NKRPNWAIRLYNHMLE 97
+ SW M++AY+ N + A+ + M E
Sbjct: 89 VFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
G E + + +VL ACS D+ G+ IH RI L + N L +MY KCG+L
Sbjct: 149 EG-FESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 157 -TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVKR--GFEKEDVTLTS 206
R LFD+ N NV WNSM+SG Q FC + G + VT+++
Sbjct: 208 QARWLFDRMVN------KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISN 261
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE---------------------- 244
++ Y +CG ID+ F + E+D V WT ++VGC +
Sbjct: 262 ILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPD 321
Query: 245 --------CSCFTLS-------------------------ALVDMYSNCNVLCEARKLFD 271
SC L+ ALVDMYS C +A +F
Sbjct: 322 NFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFK 381
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + NV WNSMI GY N ++ EA+ L + + D+ TF L AC+
Sbjct: 382 RMLT------RNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACM- 434
Query: 332 LLNFNSRFALQVHGLIVTSG----YELDYIVGSN--------LIDLYARLGNVKSALELF 379
H +V G Y + I G N +I+L R G + A++L
Sbjct: 435 ------------HAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLI 482
Query: 380 HRLP-KKDVVAWSGLIMGC 397
+ + + + WS L+ C
Sbjct: 483 KSMTFEPNCLIWSTLLSVC 501
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 117/247 (47%), Gaps = 20/247 (8%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C Q IK+GK +H RI+ L + +F N L +MYA +L+ A LFD M
Sbjct: 159 VSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVN 218
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
KN+VSW +M++ Y N +P +L+ M G + P+ S +L A G +D
Sbjct: 219 KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSG-LMPDQVTISNILSAYFQCGYIDEAC- 276
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-----LFDQY-------SNWAASAYGN 174
+ RE E D V T M V C ++ LF + N+ S+ +
Sbjct: 277 ---KTFREIKEKDKVCWTT---MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVS 330
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+ L G+ VH V G + + + ++L+DMY KCGE D +F M R+V+S
Sbjct: 331 SCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVIS 390
Query: 235 WTGIIVG 241
W +I+G
Sbjct: 391 WNSMILG 397
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + C + S+ QG+++H + + +G+ D+ + L+ MY+ DA +F M
Sbjct: 325 ISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRML 384
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N++SW +M+ Y N + A+ LY ML + +++P+ + VL AC +G ++ G+
Sbjct: 385 TRNVISWNSMILGYAQNGKDLEALALYEEML-HENLKPDNITFVGVLSACMHAGLVERGQ 443
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 315/636 (49%), Gaps = 41/636 (6%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ GKS+H ++K G TGN+ Y +L+ A +FD M ++ VSW M+
Sbjct: 65 VRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHG 124
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+ S + + + + EPN + AC G ++ G +H I R
Sbjct: 125 HLSRGASDXGLWWFRQA-RVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLD 183
Query: 139 DTVLMNTLLDMYVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV 193
+ N+LL MY +LFD+ +V W+ M+ G G+ A +
Sbjct: 184 IPSVQNSLLSMYADNDMERAEELFDEMCE------RDVISWSVMIGGYVQTGEAXMALQL 237
Query: 194 ------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
E + +T+ S++ G+I G ++ +I +
Sbjct: 238 FLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGV-----------VICRGLDYDL 286
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++++DMYS + A K F++ N WNS+ISG V E++ EA++L
Sbjct: 287 FVGNSIIDMYSKXDDHESAFKAFNEMPC------RNTVSWNSIISGLVRTEKHSEALSLF 340
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ +G D T + L++C ++ F +F +H +++ GYEL+ V ++LID Y
Sbjct: 341 YSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHSIVIRWGYELNEFVINSLIDAY 397
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
++ ++ A +LF RL KD V+WS +I G G A LF++M + + N I
Sbjct: 398 SKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTIL 457
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+L+ S A L+R K H ++RG E T+++DMY KCGEI F +PE+
Sbjct: 458 SLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEK 517
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
++VSW +I CG NG A++A+A EM LKPN +T L VLSAC H GLVEE + F
Sbjct: 518 NIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFF 577
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPDKTIWASMLKACETH 604
+M ++G+EP LEHY CMVD+L +AG + A LI +MP + +W ++L AC +
Sbjct: 578 ENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSS 637
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
N++L + A ++L P+ + Y + S++YA G+
Sbjct: 638 GNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASGL 673
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 209/512 (40%), Gaps = 124/512 (24%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
++ +V A+ C ++++G +H II+ G N+LLSMYAD + A +LF
Sbjct: 149 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELF 207
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DEM ++++SW+ M+ Y A++L+ M +E +G +VLKAC+ +GD+
Sbjct: 208 DEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDI 267
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+GR +H + L+YD + N+++DMY K F ++ N WNS+
Sbjct: 268 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDD-HESAFKAFNEMPCR---NTVSWNSI 323
Query: 182 LSG-----------------GKQ---------------------------VHAFCVKRGF 197
+SG GK +H+ ++ G+
Sbjct: 324 ISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY 383
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------ 245
E + + SLID Y KC I+ LF+ + +D VSW+ +I G C
Sbjct: 384 ELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 443
Query: 246 -----------------SCFTLSA--------------------------LVDMYSNCNV 262
F++SA ++DMY+ C
Sbjct: 444 MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGE 503
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ +RK FDQ N+ W +MI+ +N +A+ LLS + G+ + T
Sbjct: 504 IGLSRKAFDQIPE------KNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTT 557
Query: 323 TSALKACIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
S L AC + L+ F +Q HG V G E Y S ++D+ R G + A+
Sbjct: 558 LSVLSACSHGGLVEEGLSFFENMVQDHG--VEPGLE-HY---SCMVDMLXRAGKLNXAMN 611
Query: 378 LFHRLPKK---DVVAWSGLIMGCTKHGLNSLA 406
L ++P++ W L+ C G + L
Sbjct: 612 LIEKMPERMRDGAGLWGALLSACRSSGNSRLG 643
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 268/491 (54%), Gaps = 30/491 (6%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K GF+ + TSLI MY + G ++D +F+ RDVVS+T +I G
Sbjct: 108 GQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG--- 164
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y + + A+KLFD+ +V WN+MISGYV +EA+
Sbjct: 165 ------------YVSRGYIESAQKLFDEIPG------KDVVSWNAMISGYVETGNYKEAL 206
Query: 305 TLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
L + + + D T + + AC + + VH I G+ + + + LI
Sbjct: 207 ELFKEMMMMTNVRPDESTMVTVVSACAQ--SDSIELGRHVHSWINDHGFASNLKIVNALI 264
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
DLY++ G V++A ELF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 265 DLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 324
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITL-TSLIDMYLKCGEIDDGLALF 480
+ S+L C+ L ++ G+ +H + K+ G +L TSLIDMY KCG+ID +F
Sbjct: 325 TMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF 384
Query: 481 -KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
M R + +W +I G +GRA A F M + ++P++ITF+G+LSAC H+G++
Sbjct: 385 DSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGML 444
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ IF SM Y + P LEHY CM+DLLG +G F +AE++I MP +PD IW S+LK
Sbjct: 445 DLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 504
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC+ H N +L A++L+ P + YV+LSN+YA G W+ ++K+R G KK
Sbjct: 505 ACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKK 564
Query: 659 -AGMSWIEVSS 668
G S IE+ S
Sbjct: 565 VPGCSSIEIDS 575
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 191/420 (45%), Gaps = 43/420 (10%)
Query: 263 LCEARKLFDQYSSWAASAYG-----NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
C FD + +A S + N+ +WN+M G+ L+ A+ L + S G+
Sbjct: 29 FCVVSPHFDGFP-YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLP 87
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN------ 371
DSYTF LK+C + + Q+HG ++ G++LD V ++LI +YA+ G
Sbjct: 88 DSYTFPFLLKSCAK--SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK 145
Query: 372 -------------------------VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
++SA +LF +P KDVV+W+ +I G + G A
Sbjct: 146 VFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEA 205
Query: 407 YLLFRD-MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LF++ M+ +N ++ + +V+ C+ S+ G+ VH++ GF + +LID
Sbjct: 206 LELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALID 265
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+Y K GE++ LF + +DV+SW +I G KEA+ FQEM++S PN++T
Sbjct: 266 LYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 325
Query: 526 FLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYC-MVDLLGQAGCFDDAEQLIA 583
L +L AC H G ++ W K G+ ++ ++D+ + G D A+Q+
Sbjct: 326 MLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFD 385
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPSKYVMLSNVYATLGMWD 642
+ W +M+ H I ++ E D +V L + + GM D
Sbjct: 386 SSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLD 445
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 196/439 (44%), Gaps = 71/439 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDA------------ 57
L+ C + + K+G+ +H ++K G DI+ +L+SMYA L DA
Sbjct: 96 LKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155
Query: 58 -------------------HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE+ K++VSW M++ Y A+ L+ M+
Sbjct: 156 VSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMM 215
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ AC+ S ++LGR +H I + ++N L+D+Y K G +
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVET 275
Query: 159 --KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
+LFD N +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 276 ACELFDGLWN------KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 329
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ ++ G++ ++L+DMY+ C + A+
Sbjct: 330 LPACAHLGAIDIGRWIHVYINKK----LKGVVTNVSSLQ----TSLIDMYAKCGDIDAAQ 381
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD ++ + +++ WN+MISG+ ++ + A + S + +G+ D TF L
Sbjct: 382 QVFD-----SSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLS 436
Query: 328 ACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSN--LIDLYARLGNVKSALELFHRLP 383
AC + +L+ +T GYE+ + +IDL G K A E+ + +P
Sbjct: 437 ACSHSGMLDLGRNIFRS-----MTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 491
Query: 384 -KKDVVAWSGLIMGCTKHG 401
+ D V W L+ C HG
Sbjct: 492 MEPDGVIWCSLLKACKIHG 510
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 42/339 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G + ++ N L+ +Y+ F + A +LF
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELF 280
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAI 339
Query: 122 DLGRLIHERITRE---KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
D+GR IH I ++ + + L +L+DMY KCG + +++FD ++ + +++
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFD-----SSMSNRSLS 394
Query: 177 LWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+M+SG G+ AF + G E +D+T L+ G +D G +F M
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 454
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W----- 276
++ GC ++D+ + + EA ++ + W
Sbjct: 455 TRGYEITPKLEHYGC----------MIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 504
Query: 277 AASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
A +GN+ L S + + N + LLS+I+++
Sbjct: 505 ACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAA 543
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 311/594 (52%), Gaps = 44/594 (7%)
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
N A+ L N + Y S +Y+++L+ C GR H + + LE D + N+
Sbjct: 41 NDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNS 100
Query: 146 LLDMYVKCGS---LTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAF--CV 193
LL +Y K GS LTR++FD +V W SM++G G + F +
Sbjct: 101 LLSLYFKLGSDSLLTRRVFD------GLFVKDVVSWASMITGYVREGKSGIAIELFWDML 154
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
G E TL+++I + G + G + R F+ + LS+L
Sbjct: 155 DSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRG-----------FDSNPVILSSL 203
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+DMY +V +AR+LFD+ + W ++IS + N+ EEA+ H +
Sbjct: 204 IDMYGRNSVSSDARQLFDELLE------PDPVCWTTVISAFTRNDLYEEALGFFYLKHRA 257
Query: 314 G-MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+C D+YTF S L AC NL R ++H ++ G+ + + S+L+D+Y + G V
Sbjct: 258 HRLCPDNYTFGSVLTACGNLGRL--RQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAV 315
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ + LF R+ ++ V+WS L+ +G A LFR+M ++V+ + +V++ C
Sbjct: 316 EKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIRAC 371
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LA++ GK++H +++G ++ I ++L+D+Y KCG I+ +F MP R++++W
Sbjct: 372 AGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWN 431
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G QNG + AI F+ MI+ +KP+ I+F+G+L AC H GLV++A F M +
Sbjct: 432 SMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGK 491
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVS 611
YG++P +EHY CMVDLLG+AG ++AE LI + D ++W +L AC T N+
Sbjct: 492 YGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAE 551
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
IA++L+ P+ YV L+NVY +G WD KVR+ K KK G SW+
Sbjct: 552 RIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 209/500 (41%), Gaps = 124/500 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN-DAHKLFDEMARKN 68
L+ C + S +G+ H ++K GL D F GN+LLS+Y S + ++FD + K+
Sbjct: 67 LQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKD 126
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +M+T Y + AI L+ ML+ G +EPNGF SAV+KACS G+L LG+ H
Sbjct: 127 VVSWASMITGYVREGKSGIAIELFWDMLDSG-IEPNGFTLSAVIKACSEIGNLVLGKCFH 185
Query: 129 ERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSN-----WAA--SAYGNVALWN 179
+ R + + V++++L+DMY + S R+LFD+ W SA+ L+
Sbjct: 186 GVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYE 245
Query: 180 SMLS--------------------------------GGKQVHAFCVKRGFEKEDVTLTSL 207
L G+++HA + GF VT +SL
Sbjct: 246 EALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSL 305
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------------------------G 241
+DMY KCG ++ LF+ M R+ VSW+ ++ G
Sbjct: 306 VDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLYSFG 365
Query: 242 CFECSCFTLSA-------------------------LVDMYSNCNVLCEARKLFDQYSSW 276
+C L+A LVD+Y+ C + A ++FD+ +
Sbjct: 366 TVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPT- 424
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
N+ WNSMI G+ N + AI + + G+ D +F L AC +
Sbjct: 425 -----RNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHT---- 475
Query: 337 SRFALQVHGLIVTSGYELDYIVG-----------SNLIDLYARLGNVKSALELFHRLP-K 384
GL+ + + D + G + ++DL R G ++ A L +
Sbjct: 476 --------GLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECR 527
Query: 385 KDVVAWSGLIMGCTKHGLNS 404
D W L+ CT NS
Sbjct: 528 NDSSLWLVLLGACTTTCTNS 547
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
+ S ++ C LN +LL + ++ + +S+L+ C + S RG+Q HA
Sbjct: 26 IKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAH 85
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGL---ALFKFMPERDVVSWTGIIVGCGQNGRA 504
VK G E + SL+ +Y K G D L +F + +DVVSW +I G + G++
Sbjct: 86 VVKSGLETDRFVGNSLLSLYFKLGS--DSLLTRRVFDGLFVKDVVSWASMITGYVREGKS 143
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
AI F +M+ S ++PN T V+ AC G + F + G + +
Sbjct: 144 GIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLG-KCFHGVVVRRGFDSNPVILSS 202
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
++D+ G+ DA QL E+ +PD W +++ A
Sbjct: 203 LIDMYGRNSVSSDARQLFDEL-LEPDPVCWTTVISA 237
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL +R C ++ GK +HC+ I+ G +D+ + L+ +YA +N A+++
Sbjct: 359 VDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRV 418
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +N+++W +M+ + N AI+++ M++ G ++P+ + +L ACS +G
Sbjct: 419 FDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEG-IKPDCISFIGLLFACSHTGL 477
Query: 121 LDLGRLIHERIT-REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA--YGNVAL 177
+D R + +T + ++ N ++D+ + G L ++ N +A + +L
Sbjct: 478 VDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAG-----LLEEAENLIENAECRNDSSL 532
Query: 178 WNSMLSG------GKQVHAFCVKRGFEKED---VTLTSLIDMYLKCGEIDDGLALFNFMP 228
W +L K+ E E ++ L ++Y G DD + + M
Sbjct: 533 WLVLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMK 592
Query: 229 ERDVVSWTG 237
R + G
Sbjct: 593 NRQLKKMPG 601
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 247/421 (58%), Gaps = 14/421 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L++MY N+L +A +LFDQ NV W +MIS Y + +++A+ LL
Sbjct: 49 FLVNVLINMYVKFNLLNDAHQLFDQMPQ------RNVISWTTMISAYSKCKIHQKALELL 102
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G+ + YT++S L+AC + + +H I+ G E D V S LID++A
Sbjct: 103 VLMLRDGVRPNVYTYSSVLRACNGMSDVR-----MLHCGIIKEGLESDVYVRSALIDVFA 157
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+LG + AL +F + D + W+ +I G ++ + +A LF+ M + Q ++S
Sbjct: 158 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL+ C+ LA L G Q H VK ++++ I +L+DMY KCG ++D +F M ERD
Sbjct: 218 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERD 275
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V++W+ +I G QNG ++EA+ F+ M S KPN IT +GVL AC HAGL+E+ W F
Sbjct: 276 VITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 335
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK YG+ P EHY CM+DLLG+AG DDA +L+ EM +PD W ++L AC N
Sbjct: 336 SMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 395
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
L A++++A PED Y +LSN+YA WDS+ ++RK + +G +K+ G SWIEV
Sbjct: 396 VLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEV 455
Query: 667 S 667
+
Sbjct: 456 N 456
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 141/277 (50%), Gaps = 52/277 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMAR 66
E ++ C R++ +G +L CR + + Q + F N L++MY F LNDAH+LFD+M +
Sbjct: 18 ELIKCCLSHRAVHEG-NLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 76
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N++SWTTM++AY+ K A+ L ML G V PN + YS+VL+AC+ D+ R+
Sbjct: 77 RNVISWTTMISAYSKCKIHQKALELLVLMLRDG-VRPNVYTYSSVLRACNGMSDV---RM 132
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+H I +E LE D + + L+D++ K G D S + G+ +WNS++ G
Sbjct: 133 LHCGIIKEGLESDVYVRSALIDVFAKLGEPE----DALSVFDEMVTGDAIVWNSIIGGFA 188
Query: 187 Q-----VHAFCVKR----GFEKEDVTLTS------------------------------- 206
Q V KR GF E TLTS
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 248
Query: 207 --LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+DMY KCG ++D +FN M ERDV++W+ +I G
Sbjct: 249 NALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K C ++ G + G + + LI+MY+K ++D LF MP+
Sbjct: 17 SELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 76
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--------HAG 537
R+V+SWT +I + ++A+ M++ ++PN T+ VL AC H G
Sbjct: 77 RNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVRMLHCG 136
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+++E GLE + ++D+ + G +DA + EM D +W S+
Sbjct: 137 IIKE------------GLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSI 183
Query: 598 LK----------ACETHNNTKLVSIIAEQLLATS 621
+ A E K IAEQ TS
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/667 (28%), Positives = 332/667 (49%), Gaps = 44/667 (6%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+++ + +H ++ +GLS+D+ L+S+Y F + A +FD + ++ SW M+
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMI 109
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y N + ++ YN L E + ++S VLKACS + D GR +H +I +
Sbjct: 110 RWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 168
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
D+ ++ L+DMY KC + +R++FD+ + NV W SM+ G V C+K
Sbjct: 169 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILD------RNVVCWTSMIVG--YVQNDCLK 220
Query: 195 RGF-----------EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
G E TL SL+ K G + G + + +I F
Sbjct: 221 EGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGY-----------VIKSGF 269
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ + F ++ L+D+Y C + +A +FD+ S+ ++ W +MI GY EA
Sbjct: 270 DLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTI------DLVSWTAMIVGYAQRGYPREA 323
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + + ++ T +S L AC + N VH L + G E D + L+
Sbjct: 324 LKLFTDERWKDLLPNTVTTSSVLSACAQTGSLN--MGRSVHCLGIKLGSE-DATFENALV 380
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+YA+ + A +F + KDV+AW+ +I G T++G A LF M + + +
Sbjct: 381 DMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAI 440
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKF 482
+ SVL C+ + + R G +H + +K G + + T+L++ Y KCG+ + +F
Sbjct: 441 TLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDE 500
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M E++ ++W+ +I G G G ++ F +M++ +L+PNE+ F +LSAC H+G++ E
Sbjct: 501 MGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEG 560
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
W F +M Y P ++HY CMVDLL +AG ++A I ++P +PD ++ + L C
Sbjct: 561 WRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCR 620
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
H+ L + ++L P+ YV++SN+YA+ G W ++V + K+ G K G
Sbjct: 621 LHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGW 680
Query: 662 SWIEVSS 668
S +++ +
Sbjct: 681 SLVDIET 687
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 245/566 (43%), Gaps = 104/566 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + R +G+ LHC+I+K G S D F L+ MYA + D+ ++FDE+ +N+
Sbjct: 145 LKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNV 203
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V WT+M+ Y N + L+N M E G VE N + +++ AC+ G L G+ +H
Sbjct: 204 VCWTSMIVGYVQNDCLKEGLVLFNRMRE-GLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYS-----NWAASAYG--------- 173
+ + + ++ L+ LLD+Y KCG + +FD+ S +W A G
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322
Query: 174 ---------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTL-TSLI 208
N +S+LS G+ VH +K G ED T +L+
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG--SEDATFENALV 380
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KC I D +F + ++DV++W II G Y+ EA +
Sbjct: 381 DMYAKCHMIGDARYVFETVFDKDVIAWNSIISG---------------YTQNGYAYEALE 425
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFDQ + S + D+ T S L A
Sbjct: 426 LFDQ-------------------------------------MRSDSVYPDAITLVSVLSA 448
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C ++ + R +HG + +G + VG+ L++ YA+ G+ +SA +F + +K+
Sbjct: 449 CASVGAY--RVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNT 506
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHA 446
+ WS +I G G S + LF DM+ + N+ I +++L CS L G + +
Sbjct: 507 ITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNT 566
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV-GCGQNGRAK 505
C F ++D+ + G +++ L + +P + VS G + GC + R
Sbjct: 567 MCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFD 626
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLS 531
+ M++ L P++ + ++S
Sbjct: 627 LGEVAVRRMLE--LHPDKACYYVLMS 650
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 337/674 (50%), Gaps = 45/674 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
L C R + + LH R+++ L+ D F L+++ A + +D A K+FD MA+
Sbjct: 24 LDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--- 123
N W M+ Y+S + P A+ ++ M G V P+ + +AV+ A + L
Sbjct: 81 PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRG-VSPDNYTMAAVVSASAAFAGLKWRSN 139
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQ-----YSNWAA--SAYGN 174
G IH + R D +M+ L++ Y S+ K+F++ +W + SA
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQ 199
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
W+ +L ++ A G VT+ SL+ + +D+G ++N V
Sbjct: 200 CGHWDKVLKMLSEMQA----EGIIPNKVTIISLLSACGQTQAVDEGRWVYN------QVG 249
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
GI E +AL+ MY+ C L +A + F + + WN++I G+
Sbjct: 250 KFGI-----EADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS------WNTLIDGF 298
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V N +++EA+ + + G+ D T S L AC L R + VH I +G
Sbjct: 299 VQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGEL--RKGMHVHSYIKDNGICC 356
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D I+ ++LI++YA+ G++ +A +F + KKDVV+W+ ++ G K ++A+ LF +M
Sbjct: 357 DNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMK 416
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ ++ + S+L CS L +L +G+++H++ + K+ ++L+DMY KCG ID
Sbjct: 417 IAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCID 476
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSAC 533
+F+ M + +SW +I G NG KEA+ F +M++ KP+ IT VL AC
Sbjct: 477 TASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGAC 536
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H G+V+E F M G+ P EHY C+VDLLG+AG D+A I +MP +P+ I
Sbjct: 537 AHVGMVDEGLRYFYLMS-SLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVI 595
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGK 652
W S+L AC H+ L +I + ++ +P D +V++SN++A WD + VR G
Sbjct: 596 WGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGS 655
Query: 653 KLGEKKAGMSWIEV 666
+ EK G S ++V
Sbjct: 656 RGIEKTPGHSSVQV 669
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 198/438 (45%), Gaps = 40/438 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+ L CGQ +++ +G+ ++ ++ K+G+ D+ N L+SMY L+DA + F M
Sbjct: 225 IISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ SW T++ + N A+R++ ML +G V P+G +VL AC+ G+L G
Sbjct: 285 ARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG-VTPDGITLVSVLSACAQLGELRKGM 343
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H I + D +L N+L++MY KCG + ++F + +V W M+
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTK------KDVVSWTVMVC 397
Query: 184 GGKQVHAFCVKRGFEKE---------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G + H F + +E ++ L SL+ + G +D G + +++ E +V
Sbjct: 398 GYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAK 457
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
C E SALVDMY+ C + A ++F + + WN+MI G
Sbjct: 458 DL-----CLE------SALVDMYAKCGCIDTASEIFRKMQ------HKQTLSWNAMIGGL 500
Query: 295 VLNEQNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
N +EA+ L + D T + L AC ++ + L+ L+ + G
Sbjct: 501 ASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDE--GLRYFYLMSSLGVV 558
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D ++DL R G + A ++P + + V W L+ C H L ++ +
Sbjct: 559 PDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQH 618
Query: 413 MIN-SNQDVNQFIISSVL 429
++N + DV ++ S L
Sbjct: 619 IVNVAPNDVGVHVLVSNL 636
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 305/607 (50%), Gaps = 40/607 (6%)
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++T+Y N P A ++Y +M E + F+ +VLKAC L LG+ +H + +
Sbjct: 95 LITSYIKNNCPADAAKIYAYM-RGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKN 153
Query: 135 KLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----WAA--SAYGNVALWNSMLSGG 185
D + N L+ MY + GSL R LFD+ N W+ +Y L + L
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ +H VK ++ + S+ + + ++ G A+ ++ +G+ +
Sbjct: 214 RDMHVMRVK----PSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL----- 264
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+AL+DMY C L AR++FD S ++ W +MI+ Y+ E +
Sbjct: 265 ----CTALIDMYVKCENLAYARRVFDGLSK------ASIISWTAMIAAYIHCNNLNEGVR 314
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV----HGLIVTSGYELDYIVGSN 361
L + GM + T S +K C + AL++ H + +G+ L ++ +
Sbjct: 315 LFVKMLGEGMFPNEITMLSLVKEC------GTAGALELGKLLHAFTLRNGFTLSLVLATA 368
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
ID+Y + G+V+SA +F KD++ WS +I ++ A+ +F M N
Sbjct: 369 FIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPN 428
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ + S+L +C+ SL GK +H++ K+G + + I TS +DMY CG+ID LF
Sbjct: 429 ERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFA 488
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+RD+ W +I G +G + A+ F+EM + PN+ITF+G L AC H+GL++E
Sbjct: 489 EATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQE 548
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+F M E+G P +EHY CMVDLLG+AG D+A +LI MP +P+ ++ S L AC
Sbjct: 549 GKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAAC 608
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAG 660
+ H N KL A+Q L+ P V++SN+YA+ W ++ +R+A K G K+ G
Sbjct: 609 KLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPG 668
Query: 661 MSWIEVS 667
+S IEV+
Sbjct: 669 VSSIEVN 675
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 202/490 (41%), Gaps = 100/490 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L+ C S G+ +H ++K G D+F N L+ MY++ SL A LFD++
Sbjct: 127 IPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIE 186
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++VSW+TM+ +Y + + A+ L M V+P+ ++ + DL LG+
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDM-HVMRVKPSEIGMISITHVLAELADLKLGK 245
Query: 126 LIHERITREKL--EYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY-- 172
+H + R + L L+DMYVKC +L R++FD S +W A +AY
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIH 305
Query: 173 -----GNVALWNSMLSG------------------------GKQVHAFCVKRGFEKEDVT 203
V L+ ML GK +HAF ++ GF V
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVL 365
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF--TLSALVDMYSNCN 261
T+ IDMY KCG++ ++F+ +D++ W+ +I + +C V M + C
Sbjct: 366 ATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHM-TGCG 424
Query: 262 VLCEARKL--------------------------------------FDQYSS-------- 275
+ R + D Y++
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 276 --WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-- 331
+A + ++++WN+MISG+ ++ E A+ L + + G+ + TF AL AC +
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSG 544
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
LL R H ++ G+ ++DL R G + A EL +P + ++ +
Sbjct: 545 LLQEGKRL---FHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVF 601
Query: 391 SGLIMGCTKH 400
+ C H
Sbjct: 602 GSFLAACKLH 611
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R +V L C + S++ GK +H I K G+ D+ + + MYA+ ++ AH+LF E
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
++I W M++ + + A+ L+ M G V PN + L ACS SG L
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALG-VTPNDITFIGALHACSHSGLLQE 548
Query: 124 GRLIHERITRE 134
G+ + ++ E
Sbjct: 549 GKRLFHKMVHE 559
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 208/761 (27%), Positives = 349/761 (45%), Gaps = 107/761 (14%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C + G+ +H ++ GL+ +I N+L++MY + A K+FD M
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VSWT M+ Y N + A+ + M G V+PN + ++ C+ LDLGR
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEG-VKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
IH RI E LE D +L N L+ MY CGS D S ++ +V LW +M++G
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFD----DMKSVFSRMGQSSVLLWTTMIAGCS 236
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ + A ++ F +
Sbjct: 237 QNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL 296
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-------------------- 242
TSLI +Y +CG +D L M +RDVV+W ++ C
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEG 356
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQY----------------------------- 273
F + T ++++ +N L + R++ +
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416
Query: 274 -SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
S + A + WN++I+ V N + ++A+ L + G+ + +T S L+AC L
Sbjct: 417 MSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGL 476
Query: 333 LNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ + A Q+H G+ + VG++++++YAR G++ A + F L +K +VAWS
Sbjct: 477 EDL--KLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWS 534
Query: 392 GLIMG--CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
++ +K G A+ F++M + S L C+ +A+L G+ +H
Sbjct: 535 IILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594
Query: 450 KRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
GF + + L ++I+MY KCG D +F MPE+ ++SW +IV NG A EA+
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEAL 654
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ QEM+ P+ T + +L HAGL+E F S ++GLEP C+VDL
Sbjct: 655 SSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDL 714
Query: 569 LGQAGCFDDAEQLIAEMPF-KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
L + G D AE+LI P + D W ++L AC+++ + + AE++ P+
Sbjct: 715 LARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGS 774
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+V+L+N+YA++G W S++RK +++ KK G SWIE+S
Sbjct: 775 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELS 815
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/683 (25%), Positives = 300/683 (43%), Gaps = 98/683 (14%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY + DA +FD ++ KN+ SWT M+ AY+ N A+ L+ M ++ P+
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRM-QWEGTRPDKV 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-- 162
++ L AC+ SG+LD GR IH + L + ++ N+L++MY KC + K+FD
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 163 ---QYSNWAA--SAYGNVALWNS-------------------------------MLSGGK 186
+W A + Y W+ +L G+
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
++H + G E + + +L+ MY CG DD ++F+ M + V+ WT +I GC +
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 247 CF--------------------TLSALVDMYSNCNVLCE-----ARKLFDQYSSWA---- 277
+ T ++V++ N + + E AR L + S
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 278 --ASAYG------------------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S YG +V WN+M++ N N EAI LL + G
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDLYARLGNVKSAL 376
+ T+ S L+AC NL + ++H ++ G + + VG+++I +Y + G ++A+
Sbjct: 360 NKVTYLSVLEACANLEALSQ--GREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F +P+KD V+W+ +I + A LF M N+F + S+L+ C L
Sbjct: 418 SVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLE 477
Query: 437 SLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L+ +Q+HA GF + S+++MY +CG + D F + E+ +V+W+ I+
Sbjct: 478 DLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIIL 537
Query: 496 VGCGQ--NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
Q +G + A +FQEM +KP E+TF+ L AC +E ++
Sbjct: 538 AAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASG 597
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+E L ++++ G+ G DA+ + +MP K + W S++ A HN L ++
Sbjct: 598 FVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS-WNSLIVA-YAHNGHALEALS 655
Query: 614 AEQLLATSPEDPSKYVMLSNVYA 636
+ Q + DP +S +Y
Sbjct: 656 SLQEMLLQGFDPDSGTSVSILYG 678
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/633 (30%), Positives = 311/633 (49%), Gaps = 85/633 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y +N+A +LFDEM KN++SW +M+ YT N++ + +N M E V
Sbjct: 106 NAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVV 165
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
N M ++ GDLD + +E + + V T+L + + G++ +R+
Sbjct: 166 SWN-LMVDGFIQV----GDLDSAW----KFFQETQKPNVVSWVTMLSGFARNGNILESRR 216
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQ-VHAFCVKRGFE----KEDVTLTSLIDMYLKC 214
LFDQ + N+ WN+M+S Q R FE ++ V+ T++I+ Y++
Sbjct: 217 LFDQMPS------RNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRI 270
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G++D+ L N MP R++ + T +I G Y CN + EAR+ FD+
Sbjct: 271 GKLDEARELLNEMPYRNIGAQTAMISG---------------YIQCNKVDEARRFFDEIG 315
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+W +V WN+MI+GY + + EA+ L + +
Sbjct: 316 TW------DVVCWNAMIAGYAHHGRINEALCLSKRMVNK--------------------- 348
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
D + + +I YA++G + A+++F + ++D+V+W+ LI
Sbjct: 349 --------------------DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLI 388
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G +G N A F M + + +Q + L C+ +A+L+ G Q+H VK G+
Sbjct: 389 AGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYL 448
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ +LI MY KCG I + +F + DV+SW +I G NG KEA+ F+EM
Sbjct: 449 NYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEM 508
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ P+E+TF+G+LSAC HAG+V+ +F M Y +EP EHY CMVDLLG+ G
Sbjct: 509 ASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGR 568
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
D+A +++ M K +W ++L AC H N +L + A +L P S YV+LSN+
Sbjct: 569 LDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNI 628
Query: 635 YATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
+A W+ + +VR K+ G SW+EV
Sbjct: 629 HAEANRWNEVQEVRMLMNASSTVKEPGCSWVEV 661
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 177/444 (39%), Gaps = 130/444 (29%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ S++I + N ++S Y +++A +LF+EM ++ VSWTTM+ Y
Sbjct: 216 RLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGY-------- 267
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT-L 146
+ +G+L R ++ Y + T +
Sbjct: 268 ---------------------------------VRIGKLDEARELLNEMPYRNIGAQTAM 294
Query: 147 LDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-KRGFEK 199
+ Y++C + R+ FD+ W +V WN+M++G G+ A C+ KR K
Sbjct: 295 ISGYIQCNKVDEARRFFDEIGTW------DVVCWNAMIAGYAHHGRINEALCLSKRMVNK 348
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------ 241
+ VT ++I Y + G++D + +F M ERD+VSW +I G
Sbjct: 349 DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMG 408
Query: 242 ---------CFEC---SCFTLS-------------------------ALVDMYSNCNVLC 264
F C SC T++ AL+ MY+ C +
Sbjct: 409 HEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRIL 468
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
EA +F+ + +V WNS+I GY +N +EA+ L + S GM D TF
Sbjct: 469 EAGLVFN------GICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIG 522
Query: 325 ALKACINLLNFNSRFALQVHGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALEL 378
L AC + + HGL ++ Y ++ + + ++DL R+G + A E+
Sbjct: 523 ILSAC-------NHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEI 575
Query: 379 FHRLPKKDVVA-WSGLIMGCTKHG 401
+ K W L+ C HG
Sbjct: 576 VRGMKVKATAGVWGALLGACRAHG 599
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 61/424 (14%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS----------- 246
EK VT S+I +Y K G I+ LF+ MP R++VSW ++ G
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 247 -----CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
F+ + ++ Y+ + +AR+LFD S S VA WN+MISGYV +
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFD---SLPCSYRKGVACWNAMISGYVKKGRVN 119
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL------- 354
EA L + NL+++NS A + G E
Sbjct: 120 EAKRLFDEM-----------------PVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDER 162
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D + + ++D + ++G++ SA + F K +VV+W ++ G ++G + LF M
Sbjct: 163 DVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMP 222
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ N +IS+ ++ C + R +++ E++ ++ T++I+ Y++ G++D
Sbjct: 223 SRNIVSWNAMISAYVQRCEIDEASRLFEEMP--------ERDSVSWTTMINGYVRIGKLD 274
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ L MP R++ + T +I G Q + EA +F E+ + + + +++
Sbjct: 275 EARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDV----VCWNAMIAGYA 330
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H G + EA + M + + + M+ Q G D A ++ EM + D W
Sbjct: 331 HHGRINEALCLSKRM-----VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMG-ERDLVSW 384
Query: 595 ASML 598
S++
Sbjct: 385 NSLI 388
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 143/326 (43%), Gaps = 46/326 (14%)
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF-- 410
E + + +++I +YA+ G + +A LF ++P++++V+W+ ++ G +G AY LF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 411 ---RDM---------------INSNQDVNQFIISSVLKVCSCLASLRRG--KQVHAFCVK 450
RD+ + +++ + S K +C ++ G K+ K
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAK 122
Query: 451 RGFE----KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
R F+ K I+ S++ Y + ++ GL F M ERDVVSW ++ G Q G
Sbjct: 123 RLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDS 182
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A +FQE KPN ++++ +LS G + E+ +F M ++ + M+
Sbjct: 183 AWKFFQET----QKPNVVSWVTMLSGFARNGNILESRRLFDQMPSR-----NIVSWNAMI 233
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASML----------KACETHNNTKLVSIIAEQ 616
Q D+A +L EMP + D W +M+ +A E N +I A+
Sbjct: 234 SAYVQRCEIDEASRLFEEMP-ERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQT 292
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWD 642
+ + +K + +G WD
Sbjct: 293 AMISGYIQCNKVDEARRFFDEIGTWD 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L C +++ G LH ++K G + N L++MYA + +A +F+ + +
Sbjct: 422 GLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHAD 481
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++SW +++ Y N A++L+ M G + P+ + +L AC+ +G +D G
Sbjct: 482 VISWNSLIGGYAINGYGKEALKLFEEMASEG-MAPDEVTFIGILSACNHAGMVDHG 536
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 213/743 (28%), Positives = 348/743 (46%), Gaps = 109/743 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL----------------SQDIFT----GNNLLSMYA 49
L+ C RS+ + +H +II YGL S + G +++ Y
Sbjct: 38 LKEC---RSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYL 94
Query: 50 DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
+ +DA + + + V W +V A+ R + AI + ML G+ +P+ F
Sbjct: 95 ACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGT-KPDHFTLP 153
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL----------TRK 159
LKAC G H I E + + N L+ MY + GSL TRK
Sbjct: 154 YALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRK 213
Query: 160 LFDQYSNW----AASAYGN-----VALWNSM----------------------------- 181
D +W AA G+ + L++ M
Sbjct: 214 GIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLK 273
Query: 182 -LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L K++H++ ++ G + +LID Y KCG + D + +FN M +DVVSW ++
Sbjct: 274 ALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVT 333
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y+ A +LF +V W+++I+GY
Sbjct: 334 G---------------YTQSGKFGAAFELFKNMRKENIPL--DVITWSAVIAGYAQRGYG 376
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL----------IVTS 350
+EA+ + G +S T S L AC +L + + L
Sbjct: 377 QEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGD 436
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD--VVAWSGLIMGCTKHGLNSLAYL 408
G D +V + LID+Y++ + K+A +F+ +P+++ VV W+ +I G ++G ++ A
Sbjct: 437 GDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALK 496
Query: 409 LFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED---ITLTSL 463
LF +MI+ V N + IS +L C+ L+SLR GKQ+HA+ V R E E L
Sbjct: 497 LFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY-VTRHHEYESSVYFVANCL 555
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
IDMY KCG++D +F MP+R+ VSWT ++ G G +GR KEA+ F +M ++ P++
Sbjct: 556 IDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDD 615
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
I+FL +L AC H+G+V++ F M+ +YG+ +HY C++DLL ++G D A + I
Sbjct: 616 ISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQ 675
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
EMP +P IW ++L AC H+N +L +L++ E+ Y ++SN+YAT W
Sbjct: 676 EMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKD 735
Query: 644 LSKVRKAGKKLG-EKKAGMSWIE 665
++++R+ KK G +K+ G SW++
Sbjct: 736 VARIRQLMKKSGIKKRPGCSWVQ 758
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 159/610 (26%), Positives = 261/610 (42%), Gaps = 115/610 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK- 67
AL+ CG+ S + G + H I G ++F N L++MY+ SL DA +FDE+ RK
Sbjct: 155 ALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKG 214
Query: 68 --NIVSWTTMVTAYTSNKRPNWAIRLYNHML----EYGSVEPNGFMYSA-VLKACSLSGD 120
+++SW ++V A+ P A+ L++ M E + E + + +L AC+
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKA 274
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L + IH R D + N L+D Y KCGS+ D + + + +V WN+
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMK----DAVNVFNVMEFKDVVSWNA 330
Query: 181 MLSG----GKQVHAFCVKRGFEKEDVTL-----TSLIDMYLKCGEIDDGLALFNFM---- 227
M++G GK AF + + KE++ L +++I Y + G + L F M
Sbjct: 331 MVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG 390
Query: 228 PERDVVSWTGIIVGC---------FECSCFTL-----------------------SALVD 255
E + V+ ++ C E ++L +AL+D
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALID 450
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C AR +F+ NV W MI GY + +A+ L S + S
Sbjct: 451 MYSKCRSFKAARTIFNSIPRRER----NVVTWTVMIGGYAQYGDSNDALKLFSEMISKPY 506
Query: 316 CI--DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD---YIVGSNLIDLYARLG 370
+ ++YT + L AC +L + R Q+H VT +E + Y V + LID+Y++ G
Sbjct: 507 AVAPNAYTISCILMACAHLSSL--RMGKQIHAY-VTRHHEYESSVYFVANCLIDMYSKCG 563
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+V +A +F +PK++ V+W+ ++ G HG A +F M
Sbjct: 564 DVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM----------------- 606
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM-PERDVV 489
K GF +DI+ L+ G +D GL F M + V+
Sbjct: 607 ------------------QKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVI 648
Query: 490 S----WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR---HAGLVEEA 542
+ + +I ++GR +A QEM ++P+ ++ +LSACR + L E A
Sbjct: 649 ASAQHYACVIDLLARSGRLDKAWKTIQEM---PMEPSAAIWVALLSACRVHSNVELAEYA 705
Query: 543 WTIFTSMKPE 552
SMK E
Sbjct: 706 LNKLVSMKAE 715
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 193/549 (35%), Gaps = 176/549 (32%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ IV L C +++ Q K +H I+ G D F N L+ YA S+ DA +F
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE------------------------ 97
+ M K++VSW MVT YT + + A L+ +M +
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQ 377
Query: 98 -----------YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL---------- 136
YGS EPN ++L AC+ G L G H ++ L
Sbjct: 378 EALDTFQQMILYGS-EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGD 436
Query: 137 --EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------- 184
D V+ N L+DMY KC S R +F N NV W M+ G
Sbjct: 437 GDGEDLVVHNALIDMYSKCRSFKAARTIF----NSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GKQ+HA+ + + V +
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552
Query: 207 --LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
LIDMY KCG++D +F+ MP+R+ VSWT ++ G
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG----------------------- 589
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y ++ + +EA+ + + +G D +F
Sbjct: 590 -----------------------------YGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALEL 378
L AC S + GL DY V ++ +IDL AR G + A +
Sbjct: 621 LLYAC-------SHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKT 673
Query: 379 FHRLPKKDVVA-WSGLIMGCTKHGLNSLAYLLFRDMIN--SNQDVNQFIISSVLKVCSCL 435
+P + A W L+ C H LA +++ + D + +IS++
Sbjct: 674 IQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNI------Y 727
Query: 436 ASLRRGKQV 444
A+ RR K V
Sbjct: 728 ATARRWKDV 736
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 200/697 (28%), Positives = 355/697 (50%), Gaps = 77/697 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+VE R C +K+ + +H ++ G ++ + NNL+SMY SL A K+FD
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFD 156
Query: 63 EMARKNIVSWTTMVTAYTSNKR-PNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
+M +N+VS+ + +AY+ N ++A L HM EY V+PN ++++++ C++ D
Sbjct: 157 KMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY--VKPNSSTFTSLVQVCAVLED 214
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
+ +G ++ +I + + V+ ++L MY CG L R++FD +N A A W
Sbjct: 215 VLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA------W 268
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN--FMPERDVVSWT 236
N+M+ G LK +I+DGL F M D +T
Sbjct: 269 NTMIVGS--------------------------LKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 237 GIIV--GCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYS 274
IV GC + ++L +AL+DMY +C + EA +F +
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINLL 333
+ N+ WNS+ISG N E+A+ + + S D YTF++A+ A
Sbjct: 363 N------PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
F +HG + GYE VG+ L+ +Y + +SA ++F + ++DVV W+ +
Sbjct: 417 RF--VHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I+G ++ G + LA F +M + F +SSV+ CS +A LR+G+ H ++ GF
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +L+DMY K G+ + +F D+ W ++ Q+G ++A+++F++
Sbjct: 535 DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
++++ P+ +T+L +L+AC H G + ++ MK E G++ +HY CMV+L+ +AG
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAG 653
Query: 574 CFDDAEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
D+A +LI + P ++ +W ++L AC N ++ AEQ+L PED + +++LS
Sbjct: 654 LVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
N+YA G W+ ++++R+ + L K G+SWIEV++
Sbjct: 714 NLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNN 750
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/725 (26%), Positives = 335/725 (46%), Gaps = 116/725 (16%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C S+ GK +H ++++ G D+ +++MY SL DA ++F+ M N
Sbjct: 210 AISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPN 269
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW +V A T + A+ + M G + P+ + +L ACS L G L+H
Sbjct: 270 TVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLH 329
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL-WNSMLSGGKQ 187
E I + + ++ N ++ MY CG + D + + ++ A+ WN+++SG Q
Sbjct: 330 ECILQCGYDTHLIVGNCIMTMYSSCGRI-----DNAAAFFSTMVERDAISWNTIISGHAQ 384
Query: 188 -------VHAF----------------------------------CVKRGFEKEDVTLTS 206
VH F V+ G E + +++
Sbjct: 385 AGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSA 444
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGII------------VGC------------ 242
LI+M+ + G + + +LF+ M +RD+V WT II +GC
Sbjct: 445 LINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGN 504
Query: 243 -------------------------------FECSCFTLSALVDMYSNCNVLCEARKLFD 271
F S +AL++MY+ C L EA ++F
Sbjct: 505 DFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFH 564
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
Q N+ WN++ + YV ++ EA+ L + G+ D +F + L C
Sbjct: 565 QCGK-------NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC-- 615
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
++ ++H +++ +G E D+IV + L+++Y ++ A +F R+ +D+V+W+
Sbjct: 616 ---SSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWN 672
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV--CSCLASLRRGKQVHAFCV 449
+I G +HGL+ A +F+ M ++ +VL S +SL++ + V
Sbjct: 673 AMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLIS 732
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+G+E + I +++ M+ + G + + F+ + ERD SW I+ Q+G ++A+
Sbjct: 733 DQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALK 792
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ M Q +P+ IT + VLSAC H GL+EE + FTSM E+G+ EHY C+VDLL
Sbjct: 793 LFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLL 852
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+AG D AE+L+ +MP +W ++L AC+ + K + E+++ P P+ YV
Sbjct: 853 ARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYV 912
Query: 630 MLSNV 634
+LS+V
Sbjct: 913 VLSSV 917
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 176/710 (24%), Positives = 311/710 (43%), Gaps = 136/710 (19%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C + +GK LH +++ GL +++ G +L+ MY + DA ++FD++A
Sbjct: 107 VTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLAL 166
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VSWT+M+ Y + R A+ L++ M G V PN Y+ + AC+ + G+L
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSG-VLPNRITYATAISACAHVESMADGKL 225
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH ++ + E D V+ +++MY KCGSL R++F++ + N WN++++
Sbjct: 226 IHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMP------HPNTVSWNAIVAA 279
Query: 185 GKQVHAFCVKR-----------GFEKEDVTLTSLID------------------------ 209
Q H CV+ G + VT ++++
Sbjct: 280 CTQ-HGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYD 338
Query: 210 -----------MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFEC------- 245
MY CG ID+ A F+ M ERD +SW II G C E
Sbjct: 339 THLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRM 398
Query: 246 -------SCFTLSALVD--------------------------------MYSNCNVLCEA 266
FT +++D M+S + EA
Sbjct: 399 LAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREA 458
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R LFD ++ +W S+IS YV + +++A+ + G+ + +T +AL
Sbjct: 459 RSLFDDMKDR------DIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTAL 512
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC +L + + H + G+ VG+ LI++YA+ G ++ A +FH+ K+
Sbjct: 513 NACASLTALSEGKLIHAHA--IERGFAASPAVGNALINMYAKCGCLEEADRVFHQC-GKN 569
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ + + A LF++M ++ +VL CS S G+++H
Sbjct: 570 LVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCS---SASEGRKIHN 626
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ G E + I T+L++MY +D+ +F M RD+VSW +I G ++G ++E
Sbjct: 627 ILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSRE 686
Query: 507 AIAYFQEMIQSRLKPNEITFLGVL--------SACRHAGLVEEAWTIFTSMKPEYGLEPH 558
AI FQ M + P++I+F+ VL S+ + A LVE+ + + G E
Sbjct: 687 AIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEK-------LISDQGYETD 739
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+V + G++G +A + E + D W ++ A H +
Sbjct: 740 TIVGNAIVSMFGRSGRLAEARRAF-ERIRERDAASWNVIVTAHAQHGEVE 788
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/616 (22%), Positives = 262/616 (42%), Gaps = 112/616 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ +I +G+ +H R+ +D N + MY + DA +F + + VSW
Sbjct: 12 CAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSW 71
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++ A+ + + A +++ M G + P+ + VL CS GDL G+L+H +
Sbjct: 72 NSLLAAFARDGQFQQAFQIFQRMKLQG-LAPDRITFVTVLDGCSAIGDLSRGKLLHGFVL 130
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM--------- 181
LE + ++ +L+ MY KCG + R++FD+ A +V W SM
Sbjct: 131 EAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL------ALQDVVSWTSMIMTYVQHDR 184
Query: 182 -----------------------------------LSGGKQVHAFCVKRGFEKEDVTLTS 206
++ GK +H+ ++ GFE + V +
Sbjct: 185 CVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCA 244
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+++MY KCG ++D +F MP + VSW I+ C + C
Sbjct: 245 IVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCV----------------- 287
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
ALW Y Q + IT D TF + L
Sbjct: 288 -----------------EALW------YFQRMQLQGGIT-----------PDKVTFITIL 313
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC + F +H I+ GY+ IVG+ ++ +Y+ G + +A F + ++D
Sbjct: 314 NACSSPATLT--FGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERD 371
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
++W+ +I G + G A LFR M+ ++F S++ A ++ K +
Sbjct: 372 AISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISII---DGTARMQEAKILSE 428
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
V+ G E + +++LI+M+ + G + + +LF M +RD+V WT II Q+G + +
Sbjct: 429 LMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDD 488
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCM 565
A+ + M L N+ T + L+AC + E I +++ + P + + +
Sbjct: 489 ALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGN--AL 546
Query: 566 VDLLGQAGCFDDAEQL 581
+++ + GC ++A+++
Sbjct: 547 INMYAKCGCLEEADRV 562
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 235/545 (43%), Gaps = 108/545 (19%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
+ A+L C+ + GR +H R+ + D ++ N + MY KCG + D S +
Sbjct: 5 FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVE----DAVSVF 60
Query: 168 AASAYGNVALWNSM--------------------------------------------LS 183
+ + + WNS+ LS
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLS 120
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
GK +H F ++ G E+ + TSLI MY KCG ++D +F+ + +DVVSWT +I+
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIM--- 177
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
YV +++ EA
Sbjct: 178 -------------------------------------------------TYVQHDRCVEA 188
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + SG+ + T+ +A+ AC ++ + +H ++ G+E D +V ++
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMAD--GKLIHSQVLEDGFESDVVVSCAIV 246
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQ 422
++Y + G+++ A E+F R+P + V+W+ ++ CT+HG A F+ M + ++
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDK 306
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++L CS A+L G+ +H ++ G++ I ++ MY CG ID+ A F
Sbjct: 307 VTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M ERD +SW II G Q G EA+ F+ M+ + P++ TF+ ++ ++EA
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDG---TARMQEA 423
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
I + + E G+E + ++++ + G +A L +M + D +W S++ +
Sbjct: 424 -KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDR-DIVMWTSIISSYV 481
Query: 603 THNNT 607
H ++
Sbjct: 482 QHGSS 486
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 63/420 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL C ++ +GK +H I+ G + GN L++MYA L +A ++F +
Sbjct: 508 LVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG 567
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN+VSW T+ AY + A++L+ M G ++ + + VL CS + + GR
Sbjct: 568 -KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG-LKADKVSFVTVLNGCSSASE---GR 622
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSMLSG 184
IH + +E D ++ LL+MY SL D+ S ++ + ++ WN+M++
Sbjct: 623 KIHNILLETGMESDHIVSTALLNMYTASKSL-----DEASRIFSRMEFRDIVSWNAMIA- 676
Query: 185 GKQVHAFCVK----------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
GK H + G + ++ ++++ + G L + + ++S
Sbjct: 677 GKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAF--SGSSPSSLKQARLVEK--LIS 732
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
G +E +A+V M+ L EAR+ F++ A++ WN +++ +
Sbjct: 733 DQG-----YETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAAS------WNVIVTAH 781
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE- 353
+ + E+A+ L + DS T S L AC HG ++ GY
Sbjct: 782 AQHGEVEQALKLFRRMQQESSRPDSITLVSVLSAC-------------SHGGLIEEGYHH 828
Query: 354 -----LDY-IVGSN-----LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
++ I GS ++DL AR G + A EL ++P V W L+ C G
Sbjct: 829 FTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQG 888
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 208/690 (30%), Positives = 326/690 (47%), Gaps = 94/690 (13%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ S++ + N +LS A + DA +LFDE+ R+N VSW M+ A + + R
Sbjct: 32 RLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVAD 91
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A L++ M +GF ++ ++ + +G+L L R +R+ +K T N ++
Sbjct: 92 ARDLFDAMPAR-----DGFSWTLMVSCYARAGELGLARDALDRMPGDKC---TACYNAMI 143
Query: 148 DMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKED-V 202
Y K G + D + ++ WNS+L G G+ V A D V
Sbjct: 144 SGYAKHG----RFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMV 199
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+ +++ Y++ G++D LF +P +VVSW ++ G Y
Sbjct: 200 SWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNG---------------YCRAGR 244
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ EAR+LFD+ NVA WN M+SGY+ EEA L + + I T
Sbjct: 245 IGEARELFDRIPD------RNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKN-SISWTTM 297
Query: 323 TSAL---------KACINLLNFNSRFALQ---VHGLI----------VTSGYEL-DYIVG 359
SAL K ++ + F+S FA + +HG + + G E+ D +
Sbjct: 298 ISALVRGGKLQEAKDLLDKMPFDS-FAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCW 356
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN-- 417
+ +I Y G + A+ LF ++P KD+V+W+ +I G G A +FR M N
Sbjct: 357 NTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTV 416
Query: 418 ----------------QDVNQFII-------------SSVLKVCSCLASLRRGKQVHAFC 448
+ + F++ + L C+ LA+L G+Q H+
Sbjct: 417 SWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLL 476
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
+ G+ + +LI Y KCG I + +F MP D+VSW +I G NG EAI
Sbjct: 477 ARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAI 536
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ F+EM + ++P+E+TF+GVLSAC HAGL++E + F SM +Y L P EHY CMVDL
Sbjct: 537 SVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDL 596
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG++G +A ++I M +P+ +W +ML AC H N +L + AE+L P S Y
Sbjct: 597 LGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNY 656
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
V+LSN+ A G WD +R K+ G K
Sbjct: 657 VLLSNITAEAGKWDEAQNMRVFIKERGVHK 686
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G+ H + + G D F GN L+S YA + +A ++FDEM +I
Sbjct: 457 LSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDI 516
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ Y SN AI ++ M E V P+ + VL ACS +G +D G
Sbjct: 517 VSWNALIDGYASNGHGTEAISVFREM-EDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFN 575
Query: 130 RITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+T++ L ++D+ + G L+ + F+ N +W +ML G +V
Sbjct: 576 SMTKDYALRPVAEHYACMVDLLGRSGRLS-EAFEIIQGMQVQP--NAGVWGAML-GACRV 631
Query: 189 H------AFCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
H ++ +E E ++ + ++ + G+ D+ + F+ ER V G+
Sbjct: 632 HKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGL 690
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 308/614 (50%), Gaps = 77/614 (12%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY 164
+Y+++L+ C +L LG +H ++ ++ L + LL++Y + G + R++FD+
Sbjct: 12 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 71
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI-------DMYLKCGEI 217
S NV W +++ +C +E E + L L+ D ++
Sbjct: 72 SE------RNVFSWTAIM------EMYCGLGDYE-ETIKLFYLMVNEGVRPDHFVFPKVF 118
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
L N+ +DV + + +G FE + +++DM+ C + AR+ F++
Sbjct: 119 KACSELKNYRVGKDVYDYM-LSIG-FEGNSCVKGSILDMFIKCGRMDIARRFFEEIE--- 173
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ +V +WN M+SGY + ++A+ + + G+ +S T SA+ AC NL
Sbjct: 174 ---FKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLL-- 228
Query: 338 RFALQVHGL-IVTSGYELDYIVGSNLIDLYAR---------------------------- 368
R ++HG I + D +VG++L+D YA+
Sbjct: 229 RHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAV 288
Query: 369 -----LGNVKSALELFHR----------LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
G+ K+ALE F R L +DVV W+ +I C + G + A L R+M
Sbjct: 289 TGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM 348
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
SN +VN + S L CS LA+LR+GK++H F ++ G + + L SLIDMY +CG I
Sbjct: 349 NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSI 408
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F MP+RD+VSW +I G +G +A+ FQ+ LKPN ITF +LSAC
Sbjct: 409 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 468
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+GL+EE W F MK EY ++P +E Y CMVDLL +AG F++ + I +MPF+P+ +
Sbjct: 469 SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 528
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W S+L AC H N L A L P+ YV+++N+Y+ G W+ +K+R K+
Sbjct: 529 WGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKE 588
Query: 654 LG-EKKAGMSWIEV 666
G K G SWIEV
Sbjct: 589 RGVTKPPGCSWIEV 602
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/599 (22%), Positives = 265/599 (44%), Gaps = 72/599 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ G +H +++ G+ F G+ LL +Y + DA ++FD+M+ +N+
Sbjct: 17 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 76
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SWT ++ Y I+L+ M+ G V P+ F++ V KACS + +G+ +++
Sbjct: 77 FSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVGKDVYD 135
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ E ++ + ++LDM++KCG + R+ F++ + +V +WN M+SG
Sbjct: 136 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE------FKDVFMWNIMVSGYTS 189
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+++H +C+K D+
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249
Query: 204 L-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+ SL+D Y KC ++ F + + D+VSW ++ A ++ + ++
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
C +F + S+ +V +WNS+IS + ++ A+ LL ++ S + +++ T
Sbjct: 310 AC---SVFSELST------RDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 360
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
SAL AC L R ++H I+ G + + ++LID+Y R G+++ + +F +
Sbjct: 361 VSALPACSKLAAL--RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 418
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG- 441
P++D+V+W+ +I HG A LF+ N +++L CS + G
Sbjct: 419 PQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGW 478
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
K + + ++D+ + G+ ++ L + MP E + W ++ C
Sbjct: 479 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 538
Query: 501 --NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
N E A + ++ + N + + SA AG E+A I MK +P
Sbjct: 539 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSA---AGRWEDAAKIRCLMKERGVTKP 594
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 186/490 (37%), Gaps = 151/490 (30%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
+ + C + ++ + GK ++ ++ G + ++L M+ ++ A + F+E+ K
Sbjct: 116 KVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 175
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++ W MV+ YTS A+ ++ M+ G V+PN ++ + AC+ L GR I
Sbjct: 176 DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG-VKPNSITIASAVSACTNLSLLRHGREI 234
Query: 128 HER-ITREKLEYDTVLMNTLLDMYVKCGSLT---RKL-------------------FDQY 164
H I E+L+ D ++ N+L+D Y KC S+ RK F QY
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQY 294
Query: 165 SNWAAS-----------------AYGNVALWNSMLSG----GKQVHA------------- 190
+ A+ + +V +WNS++S G+ V+A
Sbjct: 295 GDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 354
Query: 191 ---------------------------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
F ++ G + + L SLIDMY +CG I +
Sbjct: 355 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 414
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F+ MP+RD+VSW +I S YG
Sbjct: 415 FDLMPQRDLVSWNVMI---------------------------------------SVYG- 434
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ G+ + +A+ L + G+ + TFT+ L AC S L
Sbjct: 435 -------MHGFGM-----DAVNLFQQFRTMGLKPNHITFTNLLSAC-------SHSGLIE 475
Query: 344 HGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMG 396
G ++ + Y +D V + ++DL +R G LE ++P + + W L+
Sbjct: 476 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 535
Query: 397 CTKHGLNSLA 406
C H LA
Sbjct: 536 CRIHCNPDLA 545
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 17/243 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL C + +++QGK +H II+ GL F N+L+ MY S+ + ++FD M
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
++++VSW M++ Y + A+ L+ G ++PN ++ +L ACS SG ++ G
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG-LKPNHITFTNLLSACSHSGLIEEGW 478
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLS 183
+ T ++ ++D+ + G L F + + N A+W S+L
Sbjct: 479 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP----NAAVWGSLL- 533
Query: 184 GGKQVHA------FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVS 234
G ++H + + FE E + + + ++Y G +D + M ER V
Sbjct: 534 GACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 593
Query: 235 WTG 237
G
Sbjct: 594 PPG 596
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
D+ N ++ + I +S+L+ C L +LR G QVHA V G + + + L+++Y + G
Sbjct: 2 DLTNPDECIE--IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTG 59
Query: 472 EIDDGLALFKFMPERDVVSWTGII-VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
++D +F M ER+V SWT I+ + CG G +E I F M+ ++P+ F V
Sbjct: 60 CVEDARRMFDKMSERNVFSWTAIMEMYCGL-GDYEETIKLFYLMVNEGVRPDHFVFPKVF 118
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC----MVDLLGQAGCFDDAEQLIAEMP 586
AC ++ +Y L E C ++D+ + G D A + E+
Sbjct: 119 KACSELKNYRVGKDVY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE 173
Query: 587 FKPDKTIWASML 598
FK D +W M+
Sbjct: 174 FK-DVFMWNIMV 184
>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 341/687 (49%), Gaps = 61/687 (8%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ I ++ C + +++ GK +H +K LS + F G++L+ +Y+ F+ ND+ +F+E
Sbjct: 147 KTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEE 206
Query: 64 MARKNIVSWTTMVTAYTSN-KRPNW-AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ K+IV++T+M+T Y+ W A + ML+ ++E N ++L+ G L
Sbjct: 207 IINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQ-NNLEVNRVTLVSLLQIAGNLGAL 265
Query: 122 DLGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
G+ +H I R D +L ++++ Y +CG+ + + ++ G VA WN+
Sbjct: 266 QEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGA-----YQSAATVLQNSKGTVASWNA 320
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+LSG + R + + YL + L D V++ ++
Sbjct: 321 LLSG--------LNRAGQSFNAI------QYLP-------VMLHEHKVTPDSVTFANVLS 359
Query: 241 GCFECS--CFTLS------------------ALVDMYSNCNVLCEARKLFDQYSSWAASA 280
C E CF S AL+++Y+ C + ++ LFDQ
Sbjct: 360 ACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQL------I 413
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRF 339
+V +N+MI GY+ N+ EA +LL+++ + G+ D T S L A + + R+
Sbjct: 414 IKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRW 473
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+HG + G+ D V + ++ +Y+ G + +A +F L KK++V+W+ ++ GC
Sbjct: 474 ---IHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLS 530
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+G LF+ M + + + + ++ S L L KQ+H F + EK+ IT
Sbjct: 531 NGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKIT 590
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
SLI Y KCG++D LF + R++ +W +I +G + F++M + +
Sbjct: 591 ANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENI 650
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+E+TF VL+AC HAGLV++ W IF SM Y + P EHY CMVDLLG+AG +D
Sbjct: 651 QPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGY 710
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ I K TI+ ++L AC TH NT+L I+++LL P++P Y ++S VYA G
Sbjct: 711 KFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQNPGIYALISEVYAQEG 770
Query: 640 MWDSLSKVRKAGKKLGEKK-AGMSWIE 665
W+ ++ + G KK G S IE
Sbjct: 771 QWNEVANTKARADLSGLKKHPGSSLIE 797
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 246/529 (46%), Gaps = 40/529 (7%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K +H + +GL D+ G+ +LS YA+ +L+++ +F ++ +I W + + Y
Sbjct: 65 KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
P I LY L+ + NG + V+K+C+ +L LG+ +H + L + +
Sbjct: 125 GYPEEVIILYKR-LKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFV 183
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQV------HAF--- 191
++L+ +Y K +R +F++ N ++ + SM++G + +AF
Sbjct: 184 GSSLIGLYSKFSKTNDSRGVFEEIIN------KDIVAYTSMITGYSETVDSIAWNAFEIA 237
Query: 192 --CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT 249
++ E VTL SL+ + G + +G +L + R + G+ E S
Sbjct: 238 TDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAI----GVSDDILETS--- 290
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS- 308
+V+ Y+ C A + ++ G VA WN+++SG Q+ AI L
Sbjct: 291 ---IVNFYTRCGAYQSAATVLQ-------NSKGTVASWNALLSGLNRAGQSFNAIQYLPV 340
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+H + DS TF + L AC L F FA +H + +D ++ + LI++Y +
Sbjct: 341 MLHEHKVTPDSVTFANVLSACAELCYFC--FAASIHAYFIRRFIPMDVVLTTALIEVYTK 398
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
V + LF +L KDVV+++ +I G ++ + + A L M+ + + S+
Sbjct: 399 CTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSL 458
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L + L RG+ +H F ++ GF + ++ MY CG+I A+F + ++++
Sbjct: 459 LAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNL 518
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
VSWT ++ GC NG A E + FQ M + KP+ ++ + + A G
Sbjct: 519 VSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLG 567
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L +R + +G+ +H I++G D+ N +L MY+ + A +F
Sbjct: 451 DFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIF 510
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + +KN+VSWT M+ SN + ++L+ M +YG +P+ ++A S G L
Sbjct: 511 DSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGE-KPDSVSLVTAVQAVSDLGHL 569
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWN 179
+ + IH + R LE D + N+L+ Y KCG L+ LF + Y N+ WN
Sbjct: 570 NGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLF------FSLKYRNLDTWN 623
Query: 180 SMLSG----GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFM 227
+M+S G ++ + + E+E++ T ++++ G + DG +FN M
Sbjct: 624 AMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSM 680
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 136/300 (45%), Gaps = 36/300 (12%)
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
RF ++H + T G D I+GS ++ YA LG + + +F ++ D+ W+ ++
Sbjct: 62 RFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDY 121
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ G +L++ + + N I+ V+K C+ L +L GK VHA +K
Sbjct: 122 FRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNK 181
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ--NGRAKEAIAYFQEMI 515
+SLI +Y K + +D +F+ + +D+V++T +I G + + A A +M+
Sbjct: 182 FVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDML 241
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYG-----LEPHLEHYY------ 563
Q+ L+ N +T + +L + G ++E ++ S++ G LE + ++Y
Sbjct: 242 QNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAY 301
Query: 564 ------------------CMVDLLGQAGCFDDAEQ----LIAEMPFKPDKTIWASMLKAC 601
++ L +AG +A Q ++ E PD +A++L AC
Sbjct: 302 QSAATVLQNSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 217/696 (31%), Positives = 350/696 (50%), Gaps = 62/696 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
ALR RSI G +L R + +G + + N LL+ YA L A LF+ M ++
Sbjct: 71 ALRSLIAVRSI-HGAALR-RDLLHGFTPAV--ANALLTAYARCGDLTAALALFNAMPSRD 126
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKACS-LSGDLDLGRL 126
V++ +++ A +R A+ ML G P + F +VL ACS L+ DL LGR
Sbjct: 127 AVTFNSLIAALCLFRRWLPALDALRDMLLEG--HPLSSFTLVSVLLACSHLAEDLRLGRE 184
Query: 127 IHERITREK-LEYDTVL-MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
H + L+ D N LL MY + G + + LF S G V WN+M+
Sbjct: 185 AHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDT-TDSPGGGVVTWNTMV 243
Query: 183 S----GGKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF-MPERDV 232
S G+ A V RG + +T S + + + G + + + + D+
Sbjct: 244 SLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDL 303
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ + F SALVDMY++ + AR++FD + + LWN+M+
Sbjct: 304 AA-----------NSFVASALVDMYASHERVGVARRVFDMVPG----GHRQLGLWNAMVC 348
Query: 293 GYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
GY +EEA+ L + + + +G+ T L AC F + A VHG ++ G
Sbjct: 349 GYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEA--VHGYVLKRG 406
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
+ V + L+DLYARLG++++A +F + +DVV+W+ LI GC G A+ L R
Sbjct: 407 MADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVR 466
Query: 412 DMIN-------SNQD-----------VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
+M + +D N + ++L C+ LA+ +GK++H + ++
Sbjct: 467 EMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHAL 526
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + ++L+DMY KCG + A+F +P+R+V++W +I+ G +G EAIA F
Sbjct: 527 DSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDR 586
Query: 514 MIQS-RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M+ S KPNE+TF+ L+AC H+G+V+ +F SMK +G++P + + C VD+LG+A
Sbjct: 587 MVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRA 646
Query: 573 GCFDDAEQLIAEM-PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G D+A +I M P + + W+S L AC H N L I AE+L P++ S YV+L
Sbjct: 647 GRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLL 706
Query: 632 SNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
N+Y+ G+W+ S+VR ++ G K+ G SWIE+
Sbjct: 707 CNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIEL 742
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + + +++H ++K G++ + F N L+ +YA + A +F +
Sbjct: 379 IAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIE 438
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-----------------SVEPNGFMY 108
+++VSW T++T + A +L M + G V PN
Sbjct: 439 PRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTL 498
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN 166
+L C++ G+ IH R L+ D + + L+DMY KCG +L+R +FD+
Sbjct: 499 MTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPK 558
Query: 167 WAASAYGNVALWNSMLS-------GGKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGE 216
NV WN ++ G + + F + + +VT + + G
Sbjct: 559 R------NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGM 612
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGC 242
+D G+ LF+ M V T + C
Sbjct: 613 VDRGMELFHSMKRNHGVQPTPDLHAC 638
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 278/545 (51%), Gaps = 65/545 (11%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
S L GG Q+HA +K GF + + +LIDMY KCG++ +F+ MPER+VVSWT +
Sbjct: 17 GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTAL 76
Query: 239 IVGCF------EC--------------SCFTLSA-------------------------- 252
+VG EC + FTLSA
Sbjct: 77 MVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEG 136
Query: 253 -------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
LV MYS +AR++FD S N+A WNSMISGY Q +++
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSR------NLATWNSMISGYAHAGQGRDSLL 190
Query: 306 LLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--DYIVGSNL 362
+ + D +TF S LKAC L +R QVH + G + I+ L
Sbjct: 191 VFREMQRRHDEQPDEFTFASLLKACSGL--GAAREGAQVHAAMAVRGVSPASNAILAGAL 248
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+Y + + A+++F L +++ + W+ +I+G + G A LFR +S +
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++SSV+ V + A + +GKQVH + K + SL+DMYLKCG + F+
Sbjct: 309 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 368
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MP R+VVSWT +I G G++G +EAI F+EM + ++ +E+ +L +LSAC H+GLV+E
Sbjct: 369 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDEC 428
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F+ + + + P EHY CMVDLLG+AG +A++LI MP +P +W ++L AC
Sbjct: 429 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 488
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
H + + + + LLA ++P YVMLSN+ A G W +R A ++ G K+ G
Sbjct: 489 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 548
Query: 662 SWIEV 666
SW EV
Sbjct: 549 SWTEV 553
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 229/519 (44%), Gaps = 53/519 (10%)
Query: 1 MDLRR-IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
M+ RR I + LR + S++ G LH ++K G D NNL+ MYA L+ A +
Sbjct: 1 MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGE 60
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M +N+VSWT ++ + + +RL+ M G+ PN F SA LKAC G
Sbjct: 61 VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNEFTLSATLKAC--GG 117
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---RKLFDQYSNWAASAYGNVA 176
G IH R E V+ N+L+ MY K G T R++FD + N+A
Sbjct: 118 GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK-GRWTGDARRVFDVIPSR------NLA 170
Query: 177 LWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLKCGEIDDGLALFNF 226
WNSM+SG G+ + V R ++ ++ T SL+ G +G +
Sbjct: 171 TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 230
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M R V + I+ AL+D+Y C+ L A ++FD N
Sbjct: 231 MAVRGVSPASNAILA---------GALLDVYVKCHRLPVAMQVFDGLERR------NAIQ 275
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----- 341
W ++I G+ Q +EA+ L SSG+ D + +S + + FAL
Sbjct: 276 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFAD-------FALVEQGK 328
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVH + LD V ++L+D+Y + G A F +P ++VV+W+ +I G KHG
Sbjct: 329 QVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHG 388
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITL 460
A LF +M + ++ ++L CS + ++ + C R +
Sbjct: 389 HGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY 448
Query: 461 TSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D+ + GE+ + L MP E V W ++ C
Sbjct: 449 ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+I+ +L+ + +SLR G Q+HA +K GF + + +LIDMY KCG++ +F M
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
PER+VVSWT ++VG +G A+E + F EM S PNE T L AC G A
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC---GGGTRAG 122
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+ G E H +V + + DA ++ +P + T W SM+
Sbjct: 123 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLAT-WNSMISGYAH 181
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ ++ ++ E P ++ S + A G+
Sbjct: 182 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGL 218
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 270/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G++ + TSLI +Y++ G ++D +F+ P RDVVS+T +I G
Sbjct: 153 GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKG--- 209
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+KLFD+ +V WN+MISGY +EA+
Sbjct: 210 ------------YASRGYIESAQKLFDEI------PVKDVVSWNAMISGYAETGNYKEAL 251
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + ++L+D
Sbjct: 252 ELFKEMMKTNIRPDESTMVTVVSACAQ--SGSIELGRQVHSWIDDHGFGSNLKIVNSLMD 309
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G +++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 310 LYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVT 369
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR + + TSLIDMY KCG+I+ +F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + + SW +I G +GRA A F M + ++P++ITF+G+LSAC +G+++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG 489
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF +M +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 490 RHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACK 549
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
N +L A+ L+ PE+P YV+LSN+YAT G W+ ++K+R G KK G
Sbjct: 550 IRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 609
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 610 SSIEIDS 616
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 33/289 (11%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LK+C F Q
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE--GQQ 155
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GY+LD V ++LI + YA G
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
++SA +LF +P KDVV+W+ +I G + G A LF++M+ +N ++ + +V+
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+QVH++ GF + SL+D+Y KCGE++ LF+ + +DV+SW
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+I G KEA+ FQEM++S +PN++T L +L AC H G ++
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAID 384
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 192/441 (43%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + ++ K+G+ +H ++K G D+F +L+S+Y L DA
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDV 200
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 201 VSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK- 259
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
++ P+ V+ AC+ SG ++LGR +H I + ++N+L+D+Y KCG L
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 320 ACGLFE------GLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSI 373
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + S T + ++L+DMY+ C + A
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKR-LKSATN--------ASSLRTSLIDMYAKCGDIEAAH 424
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + + A + S + G+ D TF L
Sbjct: 425 QVFN------SILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLS 478
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC SR + G + DY + L IDL G K A E+ +
Sbjct: 479 AC-------SRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINN 531
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+ + D V W L+ C G
Sbjct: 532 MEMEPDGVIWCSLLKACKIRG 552
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 44/339 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N+L+ +Y+ L A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLF 324
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 325 EGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-RPNDVTMLSILPACAHLGAI 383
Query: 122 DLGRLIHERITREKLEYDT---VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
D+GR IH I + +L+ T L +L+DMY KCG + ++F+ + + S+
Sbjct: 384 DIGRWIHVYIDK-RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS----- 437
Query: 177 LWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+M+ G G+ AF + K G E +D+T L+ + G +D G +F M
Sbjct: 438 -WNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS------W----- 276
+ ++ GC ++D+ + + EA ++ + W
Sbjct: 497 TQDYKITPKLEHYGC----------MIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLK 546
Query: 277 AASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
A GNV L S + + +N LLS+I+++
Sbjct: 547 ACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATA 585
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 149/327 (45%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDL---YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S L++L + A+ +F + + +++ W+ + G
Sbjct: 52 IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRG--- 108
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + + G+Q+H +K G++ +
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLD 168
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVV--------------------------- 489
TSLI +Y++ G ++D +F P RDVV
Sbjct: 169 LFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPV 228
Query: 490 ----SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
SW +I G + G KEA+ F+EM+++ ++P+E T + V+SAC +G +E +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ + ++G +L+ ++DL + G + A L + +K D W +++ TH
Sbjct: 289 HSWID-DHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK-DVISWNTLIGG-YTHM 345
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 346 NLYKEALLLFQEMLRSGERPNDVTMLS 372
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 319/638 (50%), Gaps = 32/638 (5%)
Query: 42 NNLLSMYA---DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
N LL+ Y+ + L A ++FDE+ R + VSW +++ A+ + A RL M
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT- 157
G + + F + L++ + + +LG + + L + + LLD+Y KCG L+
Sbjct: 90 G-LTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148
Query: 158 -RKLFDQYSNWAASAYGNVALWNSMLSGGKQVH--AFCVKRGFEKEDVTLTSLIDMYLKC 214
R++FD N WN++++G + A ++ E + V L +
Sbjct: 149 ARRVFD------GMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAAL 202
Query: 215 GEIDDGLALFNFMPE-RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
+G + ++ M + ++ G +G L+A + YS C ++R++FD
Sbjct: 203 LATVEGPSWYSLMQQLHGKIAKYGSALGLV-----VLNAAITAYSQCGAFADSRRIFDGI 257
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINL 332
S ++ WNSM+ Y + ++EA+ + SG+ D Y+FTS + C +
Sbjct: 258 QS------RDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVC-SE 310
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN---VKSALELFHRLPKKDVVA 389
+ R +H L+V G E V + +I +Y R ++ A + F L KD V+
Sbjct: 311 HGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVS 370
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ ++ G + HGL+S A FR M N ++F +S+ L+ CS LA LR G+QVH+ +
Sbjct: 371 WNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVI 430
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ GF D +SLI MY KCG + D F+ + V W ++ G Q+G+A+
Sbjct: 431 QSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTD 490
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F EM+ ++ + +TF+ +L+A H GLV+E I SM+ Y + +EHY C VDL
Sbjct: 491 LFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLY 550
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG D A++LI MPF+PD +W ++L AC H N +L S +A L P S YV
Sbjct: 551 GRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYV 610
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+LS++Y+ GMW + V+K K G K G SWIEV
Sbjct: 611 LLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEV 648
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 221/508 (43%), Gaps = 62/508 (12%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G L +K GL ++F+ + LL +YA L+DA ++FD M +N VSW ++ Y
Sbjct: 114 GAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAE 173
Query: 82 NKRPNWAIRLYNHMLEYGSVE--PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+++P A+ L+ LE VE P+ ++A+L L + +H +I +
Sbjct: 174 SRKPAQAMELF---LEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALG 230
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
V++N + Y +CG+ +R++FD + ++ WNSML G H
Sbjct: 231 LVVLNAAITAYSQCGAFADSRRIFDGIQS------RDLISWNSML-GAYAYHGM------ 277
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC---------- 247
+D + + M + G + D+ S+T ++ C E C
Sbjct: 278 --DDEAMRFFVRMMRESG------------VQPDMYSFTSVVSVCSEHGCDDRQGRSIHS 323
Query: 248 -----------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+A++ MY+ C + D Y + + + + WNSM++GY
Sbjct: 324 LVVKIGLEGVTHVCNAMIAMYTRFTENC---MMEDAYKCFDSLVFKDAVSWNSMLTGYSH 380
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ + +A+ + + + D + ++AL++C +L R QVH L++ SG+ +
Sbjct: 381 HGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVL--RLGRQVHSLVIQSGFSSND 438
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V S+LI +Y++ G V A + F K V W+ ++ G +HG LF +M++
Sbjct: 439 FVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDH 498
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++L S + G ++ ++ + +D+Y + G++D
Sbjct: 499 KVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDK 558
Query: 476 GLALFKFMP-ERDVVSWTGIIVGCGQNG 502
L + MP + D + W ++ C +G
Sbjct: 559 AKELIESMPFQPDAMVWMTLLGACRIHG 586
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 203/655 (30%), Positives = 326/655 (49%), Gaps = 88/655 (13%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+SI+ K +H IIK GL +F + L+ F ++R +S+
Sbjct: 40 QSIRTFKQIHAHIIKTGLHNTLFALSKLIE--------------FSAVSRSGDISY---- 81
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
AI L+N + EPN F+++++++ S+S L + R+ +
Sbjct: 82 -----------AISLFNSI-----EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGV 125
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
E ++ LL C L ASA+ GKQ+HA +K G
Sbjct: 126 EPNSYTFPFLLK---SCAKL------------ASAHE-----------GKQIHAHVLKLG 159
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F + TSLI+MY + GE+++ +F+ RD +S+T +I G
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAG--------------- 204
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y+ + AR+LFD+ +V WN+MI+GY +++EA+ L + + +
Sbjct: 205 YALWGYMDRARQLFDEM------PVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258
Query: 317 IDSYTFTSALKACI--NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ T S L AC N L+ + + + S +L + LID+Y++ G++++
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKL----VNALIDMYSKCGDLQT 314
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A ELF + ++DV++W+ +I G T A LFR+M+ S + + S+L C+
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L ++ GK +HA+ K TSLID+Y KCG I +F M + + SW +
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAM 434
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G +G+A +A F +M ++PNEITF+G+LSAC+HAGLV+ F+SM +Y
Sbjct: 435 ICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYK 494
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
+ P +HY CM+DLLG+AG F++AE L+ M KPD IW S+L AC H +L ++A
Sbjct: 495 ISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVA 554
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
E+L P++P YV+LSN+YA G WD ++++R G KK G + IEV +
Sbjct: 555 ERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 50/335 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L C Q ++ G S+ I GL ++ N L+ MY+ L A +LFD+M
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++SW M+ YT A+ L+ ML G VEP + ++L +C+ G +DLG+
Sbjct: 324 ERDVISWNVMIGGYTHMCSYKEALALFREMLASG-VEPTEITFLSILPSCAHLGAIDLGK 382
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS 183
IH I + T L +L+D+Y KCG++ R++FD ++A WN+M+
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFD------GMKIKSLASWNAMIC 436
Query: 184 G----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G G+ AF + G E ++T ++ G +D G F+ M + +S
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS 496
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG- 293
GC ++D+ + EA L + A+W S++
Sbjct: 497 PKSQHYGC----------MIDLLGRAGLFEEAESLLQNM-----EVKPDGAIWGSLLGAC 541
Query: 294 ----------------YVLNEQNEEAITLLSHIHS 312
+ L N A LLS+I++
Sbjct: 542 RDHGRVELGELVAERLFELEPDNPGAYVLLSNIYA 576
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 290/611 (47%), Gaps = 37/611 (6%)
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+ W + +T + + A+ L+ M + G +EPN + +V KACS +L +++
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNG-LEPNNLTFPSVAKACSKLLNLKYSQIV 76
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H + + + + D + +++DMYVKC L Y+ ++ +VA WNSM+ G Q
Sbjct: 77 HTHVVKSRFQADLFVQTSVVDMYVKCSQLGFA----YNLFSRMPXRDVASWNSMIXGFAQ 132
Query: 188 -------VHAFCVK--RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
V FC G + VT+ L L ++ ++ +F GI
Sbjct: 133 LGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF----------GI 182
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+G + + + Y+ C A +FD WNSMI+GY E
Sbjct: 183 KIG-IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDK----GLKTXVSWNSMIAGYAHFE 237
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q +A+ + G D T S L +C+ + HG+ V G + D V
Sbjct: 238 QCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQV--GCDSDIQV 295
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LI +Y++ G++ SA LF + K V+W+ +I G + G A LF M +
Sbjct: 296 INTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGE 355
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ I S++ C +L GK + + G + + +LID+Y KCG +D+
Sbjct: 356 KPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARE 415
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF MPE+ +VSWT +I GC NG KEA+ F +M++ LKPN ITFL VL AC HAG
Sbjct: 416 LFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGF 475
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+E+ W F M Y + P L+HY CM DLLG+ G +A + I MPFKPD IW+ +L
Sbjct: 476 LEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR------KAGK 652
AC+ H N + +A L P+ YV ++N+YA+ G WD ++ +R KA K
Sbjct: 536 SACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMK 595
Query: 653 KLGEKKAGMSW 663
GEK W
Sbjct: 596 SSGEKPCSSKW 606
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 187/496 (37%), Gaps = 122/496 (24%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
+ C + ++K + +H ++K D+F +++ MY + L A+ LF M +++
Sbjct: 62 KACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVA 121
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHM----LEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
SW +M+ + + + L+ M + SV G +SA+ SL DL +
Sbjct: 122 SWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSAL----SLK-DLKMLES 176
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + ++ D + NT + Y KCG L +FD WNSM++G
Sbjct: 177 IHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDK----GLKTXVSWNSMIAG 232
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
GK +HA ++ G + +
Sbjct: 233 YAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSD 292
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-------------------- 240
+ +LI MY KCG+I LF+ M + VSWT +I
Sbjct: 293 IQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEA 352
Query: 241 ---------------GCFECSCFTLSALVDMYSNCN------VLCEARKLFDQYSS---- 275
GC + L +D Y+ N ++C A L D Y+
Sbjct: 353 VGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNA--LIDVYAKCGSM 410
Query: 276 ------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
+ ++ W ++I+G LN + +EA+ L + G+ + TF + L+AC
Sbjct: 411 DNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQAC 470
Query: 330 INLLNFNSR----FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-K 384
N F + F L + G LD+ S + DL R G +K A E +P K
Sbjct: 471 -NHAGFLEKGWECFNLMTKVYKINPG--LDHY--SCMADLLGRKGRLKEAFEFIQNMPFK 525
Query: 385 KDVVAWSGLIMGCTKH 400
DV WS L+ C H
Sbjct: 526 PDVGIWSVLLSACKIH 541
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I+ + CGQ +++ GK + GL ++ N L+ +YA S+++A +LF
Sbjct: 358 DLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELF 417
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K++VSWTT++ N A+ L+ M+E G ++PN + AVL+AC+ +G L
Sbjct: 418 YTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELG-LKPNHITFLAVLQACNHAGFL 476
Query: 122 DLGRLIHERITR-EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ G +T+ K+ + + D+ + G L ++ F+ N +V +W+
Sbjct: 477 EKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRL-KEAFEFIQNMPFKP--DVGIWSV 533
Query: 181 MLSGGK----QVHAFCVKRG-FEKEDVTLTSLIDM---YLKCGEIDDGLALFNFM 227
+LS K V CV FE E T + M Y G+ D A+ M
Sbjct: 534 LLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMM 588
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 337/674 (50%), Gaps = 45/674 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
L C R + + LH R+++ L+ D F L+++ A + +D A K+FD MA+
Sbjct: 24 LDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--- 123
N W M+ Y+S + P A+ ++ M G V P+ + +AV+ A + L
Sbjct: 81 PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRG-VSPDNYTMAAVVSASAAFAGLKWRSN 139
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQ-----YSNWAA--SAYGN 174
G IH + R D +M+ L++ Y S+ K+F++ +W + SA
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQ 199
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
W+ +L ++ A G VT+ SL+ + +D+G ++N V
Sbjct: 200 CGHWDKVLKMLSEMQA----EGIIPNKVTIISLLSACGQTQAVDEGRWVYN------QVG 249
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
GI E +AL+ MY+ C L +A + F + + WN++I G+
Sbjct: 250 KFGI-----EADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS------WNTLIDGF 298
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V N +++EA+ + + G+ D T S L AC L R + VH I +G
Sbjct: 299 VQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGEL--RKGMHVHSYIKDNGICC 356
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D I+ ++LI++YA+ G++ +A +F + KKDVV+W+ ++ G K ++A+ LF +M
Sbjct: 357 DNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMK 416
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ ++ + S+L CS L +L +G+++H++ + K+ ++L+DMY KCG ID
Sbjct: 417 IAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCID 476
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSAC 533
+F+ M + +SW +I G NG KEA+ F +M++ KP+ IT VL AC
Sbjct: 477 TASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGAC 536
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H G+V+E F M G+ P EHY C+VDLLG+AG D+A I +MP +P+ I
Sbjct: 537 AHVGMVDEGLRYFYLMS-SLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVI 595
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGK 652
W S+L AC H+ L +I + ++ +P D +V++SN++A WD + VR G
Sbjct: 596 WGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGS 655
Query: 653 KLGEKKAGMSWIEV 666
+ EK G S ++V
Sbjct: 656 RGIEKTPGHSSVQV 669
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 198/438 (45%), Gaps = 40/438 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+ L CGQ +++ +G+ ++ ++ K+G+ D+ N L+SMY L+DA + F M
Sbjct: 225 IISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ SW T++ + N A+R++ ML +G V P+G +VL AC+ G+L G
Sbjct: 285 ARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG-VTPDGITLVSVLSACAQLGELRKGM 343
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H I + D +L N+L++MY KCG + ++F + +V W M+
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTK------KDVVSWTVMVC 397
Query: 184 GGKQVHAFCVKRGFEKE---------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G + H F + +E ++ L SL+ + G +D G + +++ E +V
Sbjct: 398 GYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAK 457
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
C E SALVDMY+ C + A ++F + + WN+MI G
Sbjct: 458 DL-----CLE------SALVDMYAKCGCIDTASEIFRKMQ------HKQTLSWNAMIGGL 500
Query: 295 VLNEQNEEAITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
N +EA+ L + D T + L AC ++ + L+ L+ + G
Sbjct: 501 ASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDE--GLRYFYLMSSLGVV 558
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D ++DL R G + A ++P + + V W L+ C H L ++ +
Sbjct: 559 PDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQH 618
Query: 413 MIN-SNQDVNQFIISSVL 429
++N + DV ++ S L
Sbjct: 619 IVNVAPNDVGVHVLVSNL 636
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 299/622 (48%), Gaps = 87/622 (13%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKL 160
PN ++ +L +C S RL+H RI + + + N L+D+Y KC L RKL
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF------------EKEDVTLTSLI 208
FD+ N WNS++S K GF E + + S++
Sbjct: 73 FDRMPQ------RNTFTWNSLIS-------VLTKSGFLDEAARLFGSMPEPDQCSWNSMV 119
Query: 209 DMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC--------------------FE 244
+ + ++ L F M D + S+ + C +
Sbjct: 120 SGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYS 179
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ SAL+DMYS C + A ++F + N+ WNS+I+ Y N EA+
Sbjct: 180 TDVYMGSALIDMYSKCGSVACAEEVF------SGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV-TSGYELDYIVGSNLI 363
+ + SG+ D T S + AC +L LQ+H +V T+ + D ++G+ L+
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKE--GLQIHARVVKTNKFRDDLVLGNALV 291
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+YA+ V A +F R+ ++VV+ + ++ G + A +F M N
Sbjct: 292 DMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA 351
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT----------------SLIDMY 467
+I+ + G+ A + R ++E I T SLIDMY
Sbjct: 352 LIAGYTQ---------NGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMY 402
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+KCG I+DG +F+ M ERD VSW IIVG QNG EA+ F++M+ KP+ +T +
Sbjct: 403 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 462
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
GVL AC HAGLVEE F SM+ E+GL P +HY CMVDLLG+AGC ++A+ LI MP
Sbjct: 463 GVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPV 521
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
PD +W S+L AC+ H N ++ AE+LL P + YV+LSN+YA LG W + +V
Sbjct: 522 NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRV 581
Query: 648 RKAGKKLG-EKKAGMSWIEVSS 668
RK ++ G K+ G SWIEV S
Sbjct: 582 RKLMRQQGVTKQPGCSWIEVES 603
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 240/571 (42%), Gaps = 131/571 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + RS + + +H RI+ S +IF N L+ +Y L+DA KLFD M ++N
Sbjct: 22 LDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNT 81
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE---------------YGSVEP----------- 103
+W ++++ T + + A RL+ M E + E
Sbjct: 82 FTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHRE 141
Query: 104 ----NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
N + + + L AC+ DL++G +H +++ + D + + L+DMY KCGS+
Sbjct: 142 DFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACA 201
Query: 158 RKLFDQYSNWAASAYGNVALWNSM------------------------------------ 181
++F + N+ WNS+
Sbjct: 202 EEVF------SGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 182 --------LSGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDV 232
L G Q+HA VK ++D+ L +L+DMY KC ++++ +F+ M R+V
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
VS T ++ G Y+ + AR +F + + NV WN++I+
Sbjct: 316 VSETSMVSG---------------YARAASVKAARFMFSKMTQ------RNVVSWNALIA 354
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY N +NEEA+ L + + YTF + LK+
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKS------------------------ 390
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D VG++LID+Y + G+++ +F ++ ++D V+W+ +I+G ++G + A +FR
Sbjct: 391 --DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRK 448
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ + + + VL CS + G+ + G T ++D+ + G
Sbjct: 449 MLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGC 508
Query: 473 IDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+++ L + MP D V W ++ C +G
Sbjct: 509 LNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 182/446 (40%), Gaps = 112/446 (25%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G +H + K S D++ G+ L+ MY+ S+ A ++F M +N
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W +++T Y N + A+ ++ M++ G +EP+ ++V+ AC+ L G IH
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSG-LEPDEVTLASVVSACASLCALKEGLQIH 271
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYG----- 173
R+ + K D VL N L+DMY KC + R++FD+ S S Y
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 174 -------------NVALWNSMLSG----GKQVHAFCVKRGFEKEDVTLT----------- 205
NV WN++++G G+ A + R ++E + T
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSD 391
Query: 206 -----SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
SLIDMY+KCG I+DG +F M ERD VSW IIVG
Sbjct: 392 IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG------------------- 432
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+A + YG EA+ + + G D
Sbjct: 433 ---------------YAQNGYG------------------AEALQIFRKMLVCGEKPDHV 459
Query: 321 TFTSALKACINL-LNFNSR---FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
T L AC + L R F+++ HGLI + + ++DL R G + A
Sbjct: 460 TMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY------TCMVDLLGRAGCLNEAK 513
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKHG 401
L +P D V W L+ C HG
Sbjct: 514 NLIEAMPVNPDAVVWGSLLAACKVHG 539
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 321/659 (48%), Gaps = 51/659 (7%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H ++I+ G D+ T L D + A LF + + +I + ++ ++ +
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDA 87
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+ +I Y H+L+ ++ P+ F Y+ + A S D +LG +H + + + + +
Sbjct: 88 S-SISFYTHLLKNTTLSPDNFTYAFAISA---SPDDNLGMCLHAHAVVDGFDSNLFVASA 143
Query: 146 LLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVK 194
L+D+Y K + RK+FD+ + + LWN+M++G QV V
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDR------DTVLWNTMITGLVRNCCYDDSVQVFKDMVA 197
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
+G + T+ +++ + E+ G+ + + +G F + L+ L+
Sbjct: 198 QGVRLDSTTVATVLPAVAEMQEVKVGMG----------IQCLALKLG-FHFDDYVLTGLI 246
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
++S C + AR LF ++ +N++ISG+ N + E A+ + SG
Sbjct: 247 SVFSKCEDVDTARLLFGMIRK------PDLVSYNALISGFSCNGETECAVKYFRELLVSG 300
Query: 315 MCIDSYTFTSALKACINLLNFNSRF-----ALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S T + L+ +S F A + G V SG L V + L +Y+RL
Sbjct: 301 QRVSSSTM-------VGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRL 353
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+ A +LF +K V AW+ +I G + GL +A LF++M+ + N I+S+L
Sbjct: 354 NEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSIL 413
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ L +L GK VH + E+ T+LIDMY KCG I + LF E++ V
Sbjct: 414 SACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTV 473
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+W +I G G +G EA+ F EM+ +P+ +TFL VL AC HAGLV E IF +M
Sbjct: 474 TWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAM 533
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+Y +EP EHY CMVD+LG+AG + A + I +MP +P +W ++L AC H +T L
Sbjct: 534 VNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNL 593
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ +E+L P + YV+LSN+Y+ + + VR+A KK K G + IEV+
Sbjct: 594 ARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVN 652
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 181/493 (36%), Gaps = 128/493 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G LH + G ++F + L+ +Y F+ + A K+FD+M ++ V W TM+T
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + +++++ M+ G V + + VL A + ++ +G I + +D
Sbjct: 182 NCCYDDSVQVFKDMVAQG-VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY 240
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYG--------------NVALWNSMLSGG 185
++ L+ ++ KC + R LF +Y V + +L G
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300
Query: 186 KQV------------------------HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
++V FCVK G + T+L +Y + EID
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLAR 360
Query: 222 ALFNFMPERDVVSWTGIIVGCFE------------------------------CSCFTLS 251
LF+ E+ V +W +I G + +C L
Sbjct: 361 QLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG 420
Query: 252 AL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
AL +DMY+ C + EA +LFD S N
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE------KNTVT 474
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN+MI GY L+ +EA+ L + + G S TF S L AC H
Sbjct: 475 WNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYAC-------------SHAG 521
Query: 347 IVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGL 393
+V G E+ + + + ++D+ R G ++ ALE ++P + W L
Sbjct: 522 LVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTL 581
Query: 394 IMGCTKHGLNSLA 406
+ C H +LA
Sbjct: 582 LGACMIHKDTNLA 594
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C Q ++ GKS+H I L Q+I+ L+ MYA ++++A +LFD +
Sbjct: 409 ITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS 468
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
KN V+W TM+ Y + + A++L+N ML G +P+ + +VL ACS +G + G
Sbjct: 469 EKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLG-FQPSSVTFLSVLYACSHAGLVREGD 527
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
+ H + + ++E ++D+ + G L + L
Sbjct: 528 EIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKAL 563
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT--- 398
+ H ++ +GY+ D + L +G + A LF +PK D+ ++ LI G +
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85
Query: 399 -KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ +LL ++ + F IS+ G +HA V GF+
Sbjct: 86 DASSISFYTHLLKNTTLSPDNFTYAFAISAS-------PDDNLGMCLHAHAVVDGFDSNL 138
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+D+Y K + +F MP+RD V W +I G +N +++ F++M+
Sbjct: 139 FVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQ 198
Query: 518 RLKPNEITFLGVLSA 532
++ + T VL A
Sbjct: 199 GVRLDSTTVATVLPA 213
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+ HA ++ G++ + T+T L G ALF +P+ D+ + +I G +
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSA--------CRHAGLVEEAWTIFTSMKPEYG 554
A Y + + L P+ T+ +SA C HA V + G
Sbjct: 86 DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVD------------G 133
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ +L +VDL + A ++ +MP + D +W +M+
Sbjct: 134 FDSNLFVASALVDLYCKFSRVAYARKVFDKMPDR-DTVLWNTMI 176
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/683 (27%), Positives = 337/683 (49%), Gaps = 91/683 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L+ CG+ S + G + H I G ++F N L++MY+ SL +A +
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67
Query: 61 FDEMARK---NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
FDE+ ++ +++SW ++V+A+ + A+ L++ M
Sbjct: 68 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT--------------------- 106
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
++HE+ T E+ + + +++++ CGSL
Sbjct: 107 -------LIVHEKPTNERSD-----IISIVNILPACGSL--------------------- 133
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ K+VH ++ G + +LID Y KCG +++ + +FN M +DVVSW
Sbjct: 134 --KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 191
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G YS A +LF ++ W ++I+GY
Sbjct: 192 MVAG---------------YSQSGNFKAAFELFKNMRKENIPL--DMVTWTAVIAGYSQR 234
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL---IVT----- 349
+ EA+ + + SG + T S L AC +L F+ + + L ++T
Sbjct: 235 GCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDF 294
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCTKHGLNSLAY 407
G + D +V + LID+Y++ + K+A +F +P +++VV W+ +I G ++G ++ A
Sbjct: 295 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDAL 354
Query: 408 LLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS--L 463
LF +MI+ V N + IS +L C+ LA++R GKQ+HA+ ++ + L
Sbjct: 355 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 414
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I+MY KCG++D +F M ++ +SWT ++ G G +GR EA+ F +M ++ P++
Sbjct: 415 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 474
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
ITFL VL AC H G+V++ + F SM +YGL P EHY +DLL + G D A + +
Sbjct: 475 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 534
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
+MP +P +W ++L AC H+N +L +L+ + E+ Y ++SN+YAT G W
Sbjct: 535 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 594
Query: 644 LSKVRKAGKKLG-EKKAGMSWIE 665
++++R KK G +K+ G SW++
Sbjct: 595 VARIRHLMKKSGIKKRPGCSWVQ 617
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ + ++ F + VLK C L S R G H GFE +L+ MY +CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 473 IDDGLALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAYFQEM--IQSRLKPNE---- 523
+++ +F + +R DV+SW I+ ++ A A+ F +M I NE
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 524 ITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
I+ + +L AC V + + +++ L+ + + ++D + G ++A ++
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVF 178
Query: 583 AEMPFKPDKTIWASMLKACETHNNTK 608
M FK D W +M+ N K
Sbjct: 179 NMMEFK-DVVSWNAMVAGYSQSGNFK 203
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 270/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G + + TSLI MY++ G ++D +F+ P RDVVS+T +I G
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG--- 209
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+KLFD+ +V WN+MISGY +EA+
Sbjct: 210 ------------YASRGYIENAQKLFDEI------PVKDVVSWNAMISGYAETGNYKEAL 251
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + + LID
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G +++A LF RLP KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + + SW +I G +GRA + F M + ++P++ITF+G+LSAC H+G+++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF +M +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L AE L+ PE+P YV+LSN+YA+ G W+ ++K R G KK G
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 610 SSIEIDS 616
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 33/289 (11%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LK+C F Q
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE--GQQ 155
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ G +LD V ++LI + YA G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+++A +LF +P KDVV+W+ +I G + G A LF+DM+ +N ++ + +V+
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+QVH + GF + +LID+Y KCGE++ LF+ +P +DV+SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+I G KEA+ FQEM++S PN++T L +L AC H G ++
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 188/441 (42%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + ++ K+G+ +H ++K G D++ +L+SMY L DAH
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK- 259
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG L
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF++ Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 320 ACGLFERL------PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKR--------LKGVTNASSLRTS-LIDMYAKCGDIEAAH 424
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + + + L S + G+ D TF L
Sbjct: 425 QVFN------SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVK-SALELFH 380
AC S + G + DY + L IDL G K + +
Sbjct: 479 AC-------SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 381 RLPKKDVVAWSGLIMGCTKHG 401
+ D V W L+ C HG
Sbjct: 532 MEMEPDGVIWCSLLKACKMHG 552
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/582 (20%), Positives = 223/582 (38%), Gaps = 141/582 (24%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + L+ + F L A +F + N++ W
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P A++LY M+ G + PN + + VLK+C+ S G+ IH + +
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------- 172
+ D + +L+ MYV+ G L K+FD+ + +A+ Y
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+M+SG
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH + GF + +LID+Y KCGE++ LF +P +DV+SW +I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG- 341
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ +E
Sbjct: 342 --------------YTHMNLY-------------------------------------KE 350
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + SG + T S L AC +L + + V+ G + ++L
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA+ G++++A ++F+ + K + +W+ +I G HG ++ LF M +
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+L CS L G+ + +D +T ++ Y ++ LFK
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMT------QDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 483 MPER--------DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
E D V W ++ C +G + ++ + +I+
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG--- 108
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + VLK C+ + + G+Q+H +K G + +
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVV--------------------------- 489
TSLI MY++ G ++D +F P RDVV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 490 ----SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
SW +I G + G KEA+ F++M+++ ++P+E T + V+SAC +G +E +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ ++G +L+ ++DL + G + A L +P+K D W +++ TH
Sbjct: 289 HLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG-YTHM 345
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLS 372
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y+ L A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAI 383
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L +L+DMY KCG + ++F+ + + S+
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS------ 437
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ +F + K G + +D+T L+ G +D G +F M
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 229 E 229
+
Sbjct: 498 Q 498
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 224/387 (57%), Gaps = 34/387 (8%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG--- 370
G+ + +T ++ +KAC ++ + Q H I+ G+E D +V + L+ +YAR G
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQ--GKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62
Query: 371 ----------------------------NVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
++K AL+LF+ + ++DVV+W+ +I G ++G
Sbjct: 63 DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ +F M + ++FI+ SVL C+ LA+L G+Q HA+ V+ GF + + ++
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+DMY K G ++D +F MP+R+ VSW II GC Q+GR +A+ F++M+Q+ +KPN
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
EI+F+GVLSAC H GLV E F M YG+ P + HY CM+DLLG+AGC D+AE I
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MP +PD ++W ++L AC H NT+L IAE LL + YV+LSN+YA G WD
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362
Query: 643 SLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+KVRK K G K+ G SWIEV +
Sbjct: 363 DAAKVRKLMKDRGVMKQPGYSWIEVKT 389
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 25/328 (7%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ H + +K GFE + V T+L+ MY +CG ++D +F+ M ER +W +I G
Sbjct: 26 LEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITG 85
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
++ + +A KLF + S +V W ++I+GY N +
Sbjct: 86 ---------------HAQNRDMKKALKLFYEMSER------DVVSWTAVIAGYAQNGYGD 124
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
E++ + + + +GM D + S L AC +L Q H +V SG+ LD +VGS
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAAL--ELGRQFHAYVVQSGFALDIVVGSA 182
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ G+++ A ++F ++P+++ V+W+ +I GC +HG + A LLF M+ + N
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT-LTSLIDMYLKCGEIDDGLALF 480
+ VL CS + G+ + D++ T +ID+ + G +D+
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 481 KFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
MP E DV W ++ C +G + A
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELA 330
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 33/237 (13%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ NQF +S+V+K C+ +ASL +GKQ H + +K GFE + + T+L+ MY +CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 473 IDD-------------------------------GLALFKFMPERDVVSWTGIIVGCGQN 501
++D L LF M ERDVVSWT +I G QN
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G E++ F +M ++ +K + VLSAC +E F + + G +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVV 179
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+VD+ ++G +DA Q+ +MP + ++ W S++ C H ++ EQ+L
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQML 235
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 63/347 (18%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
V+PN F S V+KAC+ L+ G+ H I + E D V+ L+ MY +CGSL
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-------EKEDVTLTSLIDMY 211
+FD+ S + WN+M++G Q +K+ E++ V+ T++I Y
Sbjct: 66 HVFDKMSERSTRT------WNAMITGHAQNRD--MKKALKLFYEMSERDVVSWTAVIAGY 117
Query: 212 LKCGEIDDGLALFNFMPERDVVS----WTGIIVGCFECSCFTL----------------- 250
+ G D+ L +FN M + + S ++ C + + L
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDI 177
Query: 251 ---SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
SALVDMY+ + +A ++FD+ N WNS+I+G + + +A+ L
Sbjct: 178 VVGSALVDMYAKSGSMEDACQVFDKMPQR------NEVSWNSIITGCAQHGRGNDAVLLF 231
Query: 308 SHIHSSGMCIDSYTFTSALKAC--INLLN-----FNSRFALQVHGLIVTSGYELDYIVGS 360
+ +G+ + +F L AC L+N FN Q +G++ + +
Sbjct: 232 EQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFN--LMTQNYGIVPDVSHY------T 283
Query: 361 NLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+IDL R G + A + +P + DV W L+ C HG LA
Sbjct: 284 CMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELA 330
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 143/342 (41%), Gaps = 62/342 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C S++QGK H IIK G D+ L+ MYA SL DA +FD+M+ ++
Sbjct: 17 VKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERST 76
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE-----------------YG------------- 99
+W M+T + N+ A++L+ M E YG
Sbjct: 77 RTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKT 136
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR- 158
++ + F+ +VL AC+ L+LGR H + + D V+ + L+DMY K GS+
Sbjct: 137 GMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDA 196
Query: 159 -KLFDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLI 208
++FD+ N WNS+++G Q + ++ G + +++ ++
Sbjct: 197 CQVFDKMPQR------NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVL 250
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
G +++G FN M + GI+ +C ++D+ L EA
Sbjct: 251 SACSHTGLVNEGRGYFNLMTQN-----YGIVPDVSHYTC-----MIDLLGRAGCLDEAEN 300
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ +V++W +++ ++ E A + H+
Sbjct: 301 FIN-----GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHL 337
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G+ H +++ G + DI G+ L+ MYA S+ DA ++FD+M ++N
Sbjct: 149 LSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNE 208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++T + R N A+ L+ ML+ G ++PN + VL ACS +G ++ GR
Sbjct: 209 VSWNSIITGCAQHGRGNDAVLLFEQMLQAG-IKPNEISFVGVLSACSHTGLVNEGRGYFN 267
Query: 130 RITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW--AASAYGNVALWNSMLSGGK 186
+T+ + D ++D+ + G L D+ N+ +V++W ++L G
Sbjct: 268 LMTQNYGIVPDVSHYTCMIDLLGRAGCL-----DEAENFINGMPVEPDVSVWGALL-GAC 321
Query: 187 QVHAFC--VKR------GFEKEDVTLTSLI-DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++H KR G E + + L+ ++Y G+ DD + M +R V+ G
Sbjct: 322 RIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPG 381
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 319/643 (49%), Gaps = 44/643 (6%)
Query: 40 TGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG 99
TGN++L Y +L+ A +FD M ++ VSW M+ + S + + +
Sbjct: 72 TGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQA-RVI 130
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR- 158
+ EPN + AC G ++ G +H I R + N+LL MY + R
Sbjct: 131 AFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERA 189
Query: 159 -KLFDQYSNWAASAYGNVALWNSMLSGGKQVHA----------FCVKRGFEKEDVTLTSL 207
+LFD+ +V W+ M+ G Q E + +T+ S+
Sbjct: 190 EELFDEMCE------RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G+I G ++ +I + F ++++DMYS C+ A
Sbjct: 244 LKACANTGDISMGRSVHGV-----------VICRGLDYDLFVGNSIIDMYSKCDDHESAF 292
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
K F++ N WNS+ISG V E++ EA++L + +G D T + L+
Sbjct: 293 KAFNEMPC------RNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQ 346
Query: 328 ACINLLN-FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+C ++ F +F +H +++ GYEL+ V ++LID Y++ ++ A +LF RL KD
Sbjct: 347 SCKYFVDPFQCKF---IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKD 403
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V+WS +I G G A LF++M + + N I S+L+ S A L+R K H
Sbjct: 404 TVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHG 463
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++RG E T+++DMY KCGEI F +PE+++VSW +I CG NG A++
Sbjct: 464 IAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARD 523
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+A EM LKPN +T L VLSAC H GLVEE + F +M ++G+EP LEHY CMV
Sbjct: 524 ALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMV 583
Query: 567 DLLGQAGCFDDAEQLIAEMP--FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
D+L +AG + A LI +MP + +W ++L AC + N++L + A ++L P+
Sbjct: 584 DMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQS 643
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK-KAGMSWIEV 666
+ Y + S++YA G+W +++R K G + AG S + V
Sbjct: 644 SAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHV 686
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 231/508 (45%), Gaps = 75/508 (14%)
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---CVK-RGFEKEDVTLTSLIDM 210
S RK +D + A S Y + + L+ VH+ C GF+ T S++D
Sbjct: 22 STNRKWWDSWE--ACSRYHQMKKAGAQLTDPTLVHSILKACSSLPGFDSLTSTGNSVLDF 79
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------CFECSCFTL 250
Y+K G +D L +F+ M RD VSW +I G FE + TL
Sbjct: 80 YMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTL 139
Query: 251 -----------------------------------SALVDMYSNCNVLCEARKLFDQYSS 275
++L+ MY++ N + A +LFD+
Sbjct: 140 VLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCE 198
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLN 334
+V W+ MI GYV + + A+ L + S + + +D T S LKAC N +
Sbjct: 199 ------RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 252
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+ VHG+++ G + D VG+++ID+Y++ + +SA + F+ +P ++ V+W+ +I
Sbjct: 253 IS--MGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSII 310
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G + +S A LF M + ++ + ++L+ C + K +H+ ++ G+E
Sbjct: 311 SGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE 370
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ + SLID Y KC I+ LF + +D VSW+ +I G G+ EAIA FQEM
Sbjct: 371 LNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM 430
Query: 515 IQSRLKPNEITFLGVLSACR-HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
Q++ KPN +T L +L A A L W +++ GL + ++D+ + G
Sbjct: 431 NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR--RGLAAEVAVGTAILDMYAKCG 488
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ + ++P K + W +M+ AC
Sbjct: 489 EIGLSRKAFDQIPEK-NIVSWGAMIAAC 515
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 225/542 (41%), Gaps = 125/542 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
++ +V A+ C ++++G +H II+ G N+LLSMYAD + A +LF
Sbjct: 135 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELF 193
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DEM ++++SW+ M+ Y A++L+ M S+E +G +VLKAC+ +GD+
Sbjct: 194 DEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDI 253
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+GR +H + L+YD + N+++DMY KC F ++ N WNS+
Sbjct: 254 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDD-HESAFKAFNEMPCR---NTVSWNSI 309
Query: 182 LSG-----------------GKQ---------------------------VHAFCVKRGF 197
+SG GK +H+ ++ G+
Sbjct: 310 ISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY 369
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS----------- 246
E + + SLID Y KC I+ LF+ + +D VSW+ +I G C
Sbjct: 370 ELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 429
Query: 247 ------------------CFTLSA--------------------------LVDMYSNCNV 262
F++SA ++DMY+ C
Sbjct: 430 MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGE 489
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ +RK FDQ N+ W +MI+ +N +A+ LLS + G+ + T
Sbjct: 490 IGLSRKAFDQIPE------KNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTT 543
Query: 323 TSALKACIN--LLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
S L AC + L+ F +Q HG V G E Y S ++D+ +R G + SA+
Sbjct: 544 LSVLSACSHGGLVEEGLSFFENMVQDHG--VEPGLE-HY---SCMVDMLSRAGKLNSAMN 597
Query: 378 LFHRLPKK---DVVAWSGLIMGCTKHGLNSL-AYLLFRDMINSNQDVNQFIISSVLKVCS 433
L ++P++ W L+ C G + L A FR + Q + ++S + S
Sbjct: 598 LIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAAS 657
Query: 434 CL 435
L
Sbjct: 658 GL 659
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 315/638 (49%), Gaps = 40/638 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ G +S+ G+ +H ++I GL D + GN L+ MY SL+DA F + ++N+
Sbjct: 9 LKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNV 68
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SWT +++ N + + L M G+ E N + ++L ACS++GDL LG+ IHE
Sbjct: 69 FSWTILISLLVQNGEASEGLELLKFMDLEGT-EANKITFISLLGACSVTGDLSLGKKIHE 127
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R+ + LE D + N LL+MY C SL R +F++ + +V W ++S
Sbjct: 128 RVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERM------VFRDVVSWTIIISAYAH 181
Query: 185 -GKQVHAFCVKRGFEKE-----DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G + A + R E+E VTL S+++ + +G + ER I
Sbjct: 182 AGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIH----ER-------I 230
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ E F +A+V Y C + +AR++FD+ ++ WN+MI Y N
Sbjct: 231 VASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMD------KDIVCWNAMIGAYAQNH 284
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
E+A L + + M + T + L +C + +L H GY V
Sbjct: 285 CEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSL--HREAAARGYLSHTSV 342
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKK--DVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ LI++YA+ G++++A +F + +V+ W+ +I+ + LN A ++ M
Sbjct: 343 VNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQE 402
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ +VL VC+ G++VH+ + G D+ SLI +Y CG ++
Sbjct: 403 GIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGC-CSDVVQNSLICLYGGCGNLEAA 461
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
F+ + ++VVSW+ I+ +NG A F M Q + PN +TF VL AC HA
Sbjct: 462 QTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHA 521
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL +E W+ F SM+ ++ LEP EHY CMV+LL ++G A ++ MP +PD + W S
Sbjct: 522 GLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRS 581
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+L ACE H + + ++ A+QLL P + + YV+L N+
Sbjct: 582 LLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 619
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 234/510 (45%), Gaps = 48/510 (9%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ L C + GK +H R+ GL DI TGN LL+MY SL++A +F+ M
Sbjct: 107 ISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVF 166
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VSWT +++AY P A++LY M + S P+ +VL+AC+ L G+
Sbjct: 167 RDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFS-RPDAVTLISVLEACASLRTLVEGKT 225
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IHERI +E D + ++ Y KC ++ R++FD+ + ++ WN+M+
Sbjct: 226 IHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMD------KDIVCWNAMIGA 279
Query: 185 GKQVH----AFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
Q H AF V+ DVTL +L+D +++ G +L R +S
Sbjct: 280 YAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSH 339
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T ++ +AL++MY+ C L A ++F + A + NV WN+MI
Sbjct: 340 TSVV-----------NALINMYAKCGSLENATRVFIE----ATNRTTNVITWNTMIVANA 384
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ N EA+ + ++ G+ T+ + L C N +F + +VH + +G D
Sbjct: 385 QEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTT--GREVHSRSLATGCCSD 442
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+V ++LI LY GN+++A F + K+VV+WS ++ ++G A LF M
Sbjct: 443 -VVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTM-- 499
Query: 416 SNQD---VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG---FEKEDITLTSLIDMYLK 469
NQD N +SVL CS G F +G E ++++ K
Sbjct: 500 -NQDGVLPNIVTFTSVLHACSHAGLADEGWSY--FLSMQGDHHLEPTPEHYGCMVNLLAK 556
Query: 470 CGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G + + MP + D +W ++ C
Sbjct: 557 SGRVKQAASFMSAMPVQPDASAWRSLLGAC 586
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 195/472 (41%), Gaps = 96/472 (20%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL----------- 156
Y A+LK S L GR +H ++ L+ DT L N L+ MY +CGSL
Sbjct: 5 YEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIH 64
Query: 157 TRKLFD---------------------QYSNWAASAYGNVALWNSM--------LSGGKQ 187
R +F ++ + + + + + LS GK+
Sbjct: 65 QRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKK 124
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+H +G E + +T +L++MY C +D+ +F M RDVVSWT II
Sbjct: 125 IHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIII-------- 176
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
SAY + +GY L EA+ L
Sbjct: 177 -------------------------------SAYAH--------AGYPL-----EALQLY 192
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ D+ T S L+AC +L +H IV SG E D VG+ ++ Y
Sbjct: 193 RRMEQEFSRPDAVTLISVLEACASLRTLVE--GKTIHERIVASGVETDVFVGTAVVSFYG 250
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ V A ++F R+ KD+V W+ +I ++ A+ L+ +M+ + N + +
Sbjct: 251 KCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLIT 310
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER- 486
+L CS + RG +H RG+ + +LI+MY KCG +++ +F R
Sbjct: 311 LLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRT 370
Query: 487 -DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+V++W +IV Q EA+ + M Q +K +++T+ VL+ C + G
Sbjct: 371 TNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFG 422
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 40/413 (9%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L C R++ +GK++H RI+ G+ D+F G ++S Y +++DA ++F
Sbjct: 203 DAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVF 262
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K+IV W M+ AY N A LY M+E + PN +L +CS + +
Sbjct: 263 DRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVE-NQMRPNDVTLITLLDSCSSTCKM 321
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ G +H T ++N L++MY KCGSL ++F + +N NV WN
Sbjct: 322 ERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTT----NVITWN 377
Query: 180 SMLSGGK---------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M+ Q++ + G + DVT +++ + C D F R
Sbjct: 378 TMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAV---CANFGD------FTTGR 428
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+V S + + GC CS ++L+ +Y C L A+ F+ +S NV W+S+
Sbjct: 429 EVHSRS-LATGC--CSDVVQNSLICLYGGCGNLEAAQTAFESVAS------KNVVSWSSI 479
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIV 348
++ Y N + + A L ++ G+ + TFTS L AC L + + L + G
Sbjct: 480 VAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHH 539
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
Y +++L A+ G VK A +P + D AW L+ C H
Sbjct: 540 LEPTPEHY---GCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVH 589
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/683 (27%), Positives = 338/683 (49%), Gaps = 91/683 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L+ CG+ S + G + H I G ++F N L++MY+ SL +A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 61 FDEMARK---NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
FDE+ ++ +++SW ++V+A+ + A+ L++ M
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT--------------------- 213
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
++HE+ T E+ + + +++++ CGSL
Sbjct: 214 -------LIVHEKPTNERSD-----IISIVNILPACGSL--------------------- 240
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ K+VH ++ G + +LID Y KCG +++ + +FN M +DVVSW
Sbjct: 241 --KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 298
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G YS A +LF + ++ W ++I+GY
Sbjct: 299 MVAG---------------YSQSGNFKAAFELFKNMRK--ENIPLDMVTWTAVIAGYSQR 341
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL---IVT----- 349
+ EA+ + + SG + T S L AC +L F+ + + L ++T
Sbjct: 342 GCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDF 401
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCTKHGLNSLAY 407
G + D +V + LID+Y++ + K+A +F +P +++VV W+ +I G ++G ++ A
Sbjct: 402 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDAL 461
Query: 408 LLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS--L 463
LF +MI+ V N + IS +L C+ LA++R GKQ+HA+ ++ + L
Sbjct: 462 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 521
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
I+MY KCG++D +F M ++ +SWT ++ G G +GR EA+ F +M ++ P++
Sbjct: 522 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 581
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
ITFL VL AC H G+V++ + F SM +YGL P EHY +DLL + G D A + +
Sbjct: 582 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 641
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
+MP +P +W ++L AC H+N +L +L+ + E+ Y ++SN+YAT G W
Sbjct: 642 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 701
Query: 644 LSKVRKAGKKLG-EKKAGMSWIE 665
++++R KK G +K+ G SW++
Sbjct: 702 VARIRHLMKKSGIKKRPGCSWVQ 724
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ ++ Y G AL + R+ V W+ LI K G A + M+ +
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
++ F + VLK C L S R G H GFE +L+ MY +CG +++
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 478 ALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAYFQEM--IQSRLKPNE----ITFLG 528
+F + +R DV+SW I+ ++ A A+ F +M I NE I+ +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 529 VLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+L AC V + + +++ L+ + + ++D + G ++A ++ M F
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVFNMMEF 290
Query: 588 KPDKTIWASMLKACETHNNTK 608
K D W +M+ N K
Sbjct: 291 K-DVVSWNAMVAGYSQSGNFK 310
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 282/545 (51%), Gaps = 45/545 (8%)
Query: 140 TVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
V NT+L Y K G ++ KLFD S + WN +LSG CVK
Sbjct: 81 VVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHS------WNIVLSG-------CVKN-- 125
Query: 198 EKEDVTLTSLIDMYLKCGEI-DDGLALFNFMPERDV----VSWTGIIVGCFECSCFTLSA 252
K LT + M +C + D +P D+ I+ C + F +
Sbjct: 126 HKLGEGLTHFMKM--RCSSVRPDNFTYAIIIPCCDLGFGQQVHADIVKVCSDLDAFIGTN 183
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ MY+ + +ARK+FD S + WN+MIS Y + +++I L +
Sbjct: 184 LLRMYAEVGEIGDARKVFDGMPSRG------LVTWNAMISCYSKYGRGDKSIGLFRQLXR 237
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRF----ALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
G+ D YT+ I L F +R+ A+QVH LI+ G+ D + L++LY++
Sbjct: 238 EGISADEYTYA------IVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSK 291
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G V SA LF +P +DVV+W+ +I+G + G A LF M + + N F +
Sbjct: 292 CGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGL 351
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERD 487
L C+ + ++G+ H +K G D+ + S ++DMY KCGE+ D L F+ MPERD
Sbjct: 352 LGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERD 411
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMI---QSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+ SW GII G QNG +A+ + EM+ S + PNE+TF+GVL AC H GL++E ++
Sbjct: 412 IASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYS 471
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F M ++ ++P EHY CMVDLLG+AG +AE LI +P KPD +W ++L AC+ H
Sbjct: 472 YFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLH 531
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
+ ++ AE L P + S YV+L+N Y +G W ++R+ + G EK AG SW
Sbjct: 532 GDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSW 591
Query: 664 IEVSS 668
+E+ +
Sbjct: 592 VEIGT 596
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 198/412 (48%), Gaps = 30/412 (7%)
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+HA VK G L+ Y+ + D L +FMP+ VVS+ I+ G F+
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFK--- 93
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L + EA KLFD S + WN ++SG V N + E +T
Sbjct: 94 FGL------------VSEAIKLFDGTSKRDCHS------WNIVLSGCVKNHKLGEGLTHF 135
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ S + D++T+ + C + F QVH IV +LD +G+NL+ +YA
Sbjct: 136 MKMRCSSVRPDNFTYAIIIPCC------DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYA 189
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+G + A ++F +P + +V W+ +I +K+G + LFR + +++ +
Sbjct: 190 EVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAI 249
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL + + QVH+ ++RGF + T +L+++Y KCG + LF+ +P++D
Sbjct: 250 VLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQD 309
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VVSWT IIVG Q+G +EA+ F +M ++PN TF G+L AC A ++ F
Sbjct: 310 VVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKG-RHFH 368
Query: 548 SMKPEYG-LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ ++G L + +VD+ + G DA + EMP + D W ++
Sbjct: 369 GLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPER-DIASWNGII 419
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 199/510 (39%), Gaps = 147/510 (28%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
LH ++K GL ++ N LL Y + +L+DAHKL M + ++VS+ T+++ Y
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 85 PNWAIRLY--------------------NHMLEYG----------SVEPNGFMYSAVLKA 114
+ AI+L+ NH L G SV P+ F Y+ ++
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPC 156
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----W 167
C DL G+ +H I + + D + LL MY + G + RK+FD + W
Sbjct: 157 C----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTW 212
Query: 168 AA-----SAYG----NVALWNSMLSGG------------------------KQVHAFCVK 194
A S YG ++ L+ + G QVH+ ++
Sbjct: 213 NAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIE 272
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF----------- 243
RGF + T +L+++Y KCG + LF +P++DVVSWT IIVG
Sbjct: 273 RGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWL 332
Query: 244 ---------ECSCFTLSAL------------------------------------VDMYS 258
E + FT L VDMYS
Sbjct: 333 FYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYS 392
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH---IHSSGM 315
C + +A + F + ++A WN +I GY N +A+ L + + SG+
Sbjct: 393 KCGEMGDALRAFQEMPER------DIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGI 446
Query: 316 CIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ TF L AC + L S F V ++ E Y + ++DL R G +
Sbjct: 447 APNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAE-HY---TCMVDLLGRAGLL 502
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ A L LP K D V W L+ C HG
Sbjct: 503 QEAEALILALPIKPDNVMWGALLGACKLHG 532
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 28/267 (10%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
R + + +H II+ G D FT N L+++Y+ + A +LF+E+ +++VSWT +
Sbjct: 257 RWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVI 316
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
+ + + A+ L+ M + G +EPN F + +L AC+ + GR H + +
Sbjct: 317 IVGFLQSGHMEEAMWLFYQM-QLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFG 375
Query: 136 -LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA---- 190
L D V+ + ++DMY KCG + D + ++A WN ++ G Q A
Sbjct: 376 LLGADVVVGSAVVDMYSKCGEMG----DALRAFQEMPERDIASWNGIICGYAQNGAGMKA 431
Query: 191 --------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G +VT ++ G + +G + F M ++ ++ T C
Sbjct: 432 LKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTC 491
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKL 269
+VD+ +L EA L
Sbjct: 492 ----------MVDLLGRAGLLQEAEAL 508
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS 71
C + ++G+ H ++K+GL D+ G+ ++ MY+ + DA + F EM ++I S
Sbjct: 355 CADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIAS 414
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGS--VEPNGFMYSAVLKACSLSGDLDLG----- 124
W ++ Y N A++LYN M+ G + PN + VL ACS +G L G
Sbjct: 415 WNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFK 474
Query: 125 RLIHERITREKLEYDTVLMNTL 146
++ + + + E+ T +++ L
Sbjct: 475 EMVDKHLIKPTAEHYTCMVDLL 496
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 289/566 (51%), Gaps = 30/566 (5%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY 164
+Y +L++ + + G IH + + + L N LL+MY+KC LT +LFD+
Sbjct: 7 LYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEM 66
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI--DMYLKCGEIDDGLA 222
NV W+S+++G CV G + ++L S + + ++K E A
Sbjct: 67 PE------RNVVSWSSVMTG-------CVHNGGASDALSLFSCMHREGFVKPNEFTFVSA 113
Query: 223 LFNFMPERDVVS----WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
L +V ++ ++ EC+ F L+A + L EA ++F+
Sbjct: 114 LQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFE------T 167
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
S + WN+M+ GY L +E+ +++ G+ D +TF SAL + + +
Sbjct: 168 SPIRDTVTWNTMMGGY-LEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSL--K 224
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+QVH +V SGY D VG++L+D+Y + ++ + F +P KDV +W+ + GC
Sbjct: 225 MGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCL 284
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ G +A + M N+F +++ L C+CLAS+ GKQ H +K G + +
Sbjct: 285 QWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVC 344
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+L+DMY KCG +D +F+ R VVSWT +I+ C QNG+ EA+ F EM ++
Sbjct: 345 VDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETS 404
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PN ITF+ VL AC G V+E W +SM +YG+ P +HY CMV +LG+AG +A
Sbjct: 405 VEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEA 464
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
++LI MPF P +W ++L AC+ H + + + AE + DPS YV+LSN+ A
Sbjct: 465 KELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAET 524
Query: 639 GMWDSLSKVRKAGKKLGEKKAGMSWI 664
WD + +R+ + KK S I
Sbjct: 525 SNWDCVVSLRELMETRNVKKVPGSRI 550
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 215/544 (39%), Gaps = 127/544 (23%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ LR Q + +G ++H IK + +F N+LL+MY L A +LFDEM
Sbjct: 9 INLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPE 68
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+VSW++++T N + A+ L++ M G V+PN F + + L+ACSLS ++
Sbjct: 69 RNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQ 128
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I+ + R LE + L+N L V+ G LT L + S + WN+M+ G
Sbjct: 129 IYSLVVRSGLECNVFLLNAFLTALVRNGKLTEAL----QIFETSPIRDTVTWNTMMGGYL 184
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G QVHA V+ G+ +
Sbjct: 185 EFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICV 244
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------- 244
SL+DMYLK ++++G F+ +P +DV SWT + GC +
Sbjct: 245 GNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGV 304
Query: 245 -------------CSCFTL-----------------------SALVDMYSNCNVLCEARK 268
C+C +AL+DMY+ C + A
Sbjct: 305 KPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWT 364
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F +S +V W +MI N Q EA+ + + + + + TF L A
Sbjct: 365 VFRSTNS------RSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYA 418
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDY--IVGSN----LIDLYARLGNVKSALELFHRL 382
C S+ G S + DY I G + ++ + R G +K A EL R+
Sbjct: 419 C-------SQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRM 471
Query: 383 P-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI--NSNQDVNQFIISSVLKVCS---CLA 436
P V W L+ C HG L I + N + ++S++L S C+
Sbjct: 472 PFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVV 531
Query: 437 SLRR 440
SLR
Sbjct: 532 SLRE 535
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ AL C S+++GK H IK G D+ N LL MYA ++ A +F
Sbjct: 311 LATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN 370
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+++VSWTTM+ A N +P A+++++ M E SVEPN + VL ACS G +D G
Sbjct: 371 SRSVVSWTTMIMACAQNGQPGEALQIFDEMKE-TSVEPNYITFICVLYACSQGGFVDEG 428
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 299/637 (46%), Gaps = 93/637 (14%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N+ ++ YA + A ++FDEM K IVSW +MV Y N RP A L++ M E +V
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF 161
NG + V R++ E RK F
Sbjct: 80 SWNGLISGYVKN-----------RMVSE---------------------------ARKAF 101
Query: 162 DQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGE 216
D NV W +M+ G Q EK V+ T ++ ++
Sbjct: 102 DTMPE------RNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRR 155
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
ID+ LF+ MP +DVV+ T +I G Y L EAR+LFD+
Sbjct: 156 IDEARGLFDIMPVKDVVARTNMISG---------------YCQEGRLAEARELFDEMPR- 199
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLL------SHIHSSGMCIDSYTFTSALKACI 330
NV W +MISGYV N Q + A L + + + M + YT ++
Sbjct: 200 -----RNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLM-GYTQGGRIEEAS 253
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
L + A+ V ++ + L + G N G V A ++F ++ +KD W
Sbjct: 254 ELFD-----AMPVKAVVACNAMILGF--GQN--------GEVAKARQVFDQIREKDDGTW 298
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
S +I + G A LF M N + SVL VC+ LASL G+QVHA VK
Sbjct: 299 SAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVK 358
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
F+ + + LI MY+KCG++ +F +D+V W II G Q+G +EA+
Sbjct: 359 SQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQV 418
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F EM S + + +TF+GVLSAC + G V+E IF SMK +Y +EP EHY CMVDLLG
Sbjct: 419 FHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLG 478
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG +DA LI +MP + D IW ++L AC TH N L + A++LL P++ Y++
Sbjct: 479 RAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYIL 538
Query: 631 LSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
LSN+YA+ G W ++++R+ + K K G SWIEV
Sbjct: 539 LSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEV 575
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 217/502 (43%), Gaps = 60/502 (11%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ + I + N++++ Y +A LFD+M +N VSW +++ Y N+ +
Sbjct: 37 RVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSE 96
Query: 88 AIRLYNHMLEYGSVE----PNGFMYSAVLKACS-----------LSGDLDLGRLIHERIT 132
A + ++ M E V G++ ++ +S + LG LI R
Sbjct: 97 ARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRI 156
Query: 133 REKLEY-------DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
E D V ++ Y + G L R+LFD+ NV W +M+S
Sbjct: 157 DEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPR------RNVISWTTMIS 210
Query: 184 GGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G Q V R EK +V+ T+++ Y + G I++ LF+ MP + VV+ +
Sbjct: 211 GYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAM 270
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I+G + + +AR++FDQ + W++MI Y
Sbjct: 271 ILG---------------FGQNGEVAKARQVFDQIRE------KDDGTWSAMIKVYERKG 309
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EA+ L + + G+ + + S L C +L + + QVH +V S ++ D V
Sbjct: 310 FEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLD--HGRQVHAELVKSQFDSDVFV 367
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
S LI +Y + G++ A ++F R KD+V W+ +I G +HGL A +F +M +S
Sbjct: 368 ASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGM 427
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ VL CS ++ G ++ + K E + ++D+ + G ++D +
Sbjct: 428 ATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAM 487
Query: 478 ALFKFMP-ERDVVSWTGIIVGC 498
L + MP E D + W ++ C
Sbjct: 488 DLIQKMPVEADAIIWGALLGAC 509
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 76/400 (19%)
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF----------------EC 245
+ S I Y + G+I+ +F+ MP++ +VSW ++ G F E
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ + + L+ Y ++ EARK FD NV W +M+ GYV EA T
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPE------RNVVSWTAMVRGYVQEGLVSEAET 130
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + ++T L I + + + GL + D + +N+I
Sbjct: 131 LFWQMPEKNVV----SWTVMLGGLIQVRRID-----EARGLFDIMPVK-DVVARTNMISG 180
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G + A ELF +P+++V++W+ +I G ++G +A LF M
Sbjct: 181 YCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----------- 229
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
EK +++ T+++ Y + G I++ LF MP
Sbjct: 230 ----------------------------EKNEVSWTAMLMGYTQGGRIEEASELFDAMPV 261
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+ VV+ +I+G GQNG +A F ++ + ++ T+ ++ G EA +
Sbjct: 262 KAVVACNAMILGFGQNGEVAKARQVFDQIREK----DDGTWSAMIKVYERKGFEVEALNL 317
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F M+ E G++ + ++ + D Q+ AE+
Sbjct: 318 FALMQRE-GVQSNFPSLISVLSVCASLASLDHGRQVHAEL 356
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 110/456 (24%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+ N++S Y L +A +LFDEM R+N++SWTTM++ Y N + + A +L+ M
Sbjct: 169 KDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM 228
Query: 96 LEY---------------GSVEPNGFMYSAV----LKACSL-------SGDLDLGRLIHE 129
E G +E ++ A+ + AC+ +G++ R + +
Sbjct: 229 PEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFD 288
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG---------SLTRKLFDQYSNWAASAYGNVALWNS 180
+I REK D + ++ +Y + G +L ++ Q + + + +V +
Sbjct: 289 QI-REK---DDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLA 344
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L G+QVHA VK F+ + + LI MY+KCG++ +F+ +D+V W II
Sbjct: 345 SLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIIT 404
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G + LV+
Sbjct: 405 G------YAQHGLVE--------------------------------------------- 413
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + + SSGM D TF L AC ++ + GL + + Y+V
Sbjct: 414 -EALQVFHEMCSSGMATDGVTFVGVLSAC----SYTGKVK---EGLEIFESMKSKYLVEP 465
Query: 361 N------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
++DL R G V A++L ++P + D + W L+ C H +LA + + +
Sbjct: 466 KTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKL 525
Query: 414 IN-SNQDVNQFIISSVLKVCSC----LASLRRGKQV 444
+ ++ +I+ S + +A LRR +V
Sbjct: 526 LQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRV 561
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C S+ G+ +H ++K D+F + L++MY L A ++FD +
Sbjct: 333 LISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+IV W +++T Y + A+++++ M G + +G + VL ACS +G + G
Sbjct: 393 PKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSG-MATDGVTFVGVLSACSYTGKVKEGL 451
Query: 126 LIHERITREKL-EYDTVLMNTLLDMYVKCG 154
I E + + L E T ++D+ + G
Sbjct: 452 EIFESMKSKYLVEPKTEHYACMVDLLGRAG 481
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
I S I Y + G+I+ +F MP++ +VSW ++ G QN R +EA F +M +
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
N +++ G++S +V EA F +M E ++ + MV Q G +
Sbjct: 77 ----NTVSWNGLISGYVKNRMVSEARKAFDTMP-----ERNVVSWTAMVRGYVQEGLVSE 127
Query: 578 AEQLIAEMPFKPDKTIWASML 598
AE L +MP K + W ML
Sbjct: 128 AETLFWQMPEK-NVVSWTVML 147
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 188/625 (30%), Positives = 313/625 (50%), Gaps = 53/625 (8%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N LL+ YA L A ++FD M +N+V+ ++++A RL+ + + +V
Sbjct: 50 NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAV 109
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF 161
Y+A+L S +G + + R++ G ++
Sbjct: 110 S-----YNALLAGFSRAGAHARAAGAYVALLRDE-----------------AGVRPSRIT 147
Query: 162 DQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
ASA G+ AL G+QVH ++ GF T + L+DMY K G I D
Sbjct: 148 MSGVVMVASALGDRAL-------GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+F+ M ++VV +I G C ++ EAR LF+ A
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRC---------------KMVAEARALFE------AIEE 239
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
+ W +M++G N EA+ + + + G+ ID YTF S L AC L
Sbjct: 240 RDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEE--GK 297
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H I + YE + VGS L+D+Y++ +V+ A +F R+ K++++W+ +I+G ++G
Sbjct: 298 QIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNG 357
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
A +F +M + F + SV+ C+ LASL G Q H + G
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+ +Y KCG I+D LF M D VSWT +++G Q G+AKE I F++M+ +KP
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKP 477
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ +TF+GVLSAC +GLV++ + F SM+ ++ + P +HY CM+DL ++G AE+
Sbjct: 478 DGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEF 537
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I +MP PD WA++L AC + ++ AE LL P++P+ YV+L +++A+ G W
Sbjct: 538 IKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEW 597
Query: 642 DSLSKVRKAGK-KLGEKKAGMSWIE 665
+ ++K+R+ + + +K+ G SWI+
Sbjct: 598 NDVAKLRRGMRDRQVKKEPGCSWIK 622
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 213/509 (41%), Gaps = 48/509 (9%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ +++ TGN+LLS A + D +LF + +++ VS+ ++ ++
Sbjct: 67 RVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHAR 126
Query: 88 AIRLYNHML-EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A Y +L + V P+ S V+ S GD LGR +H +I R + L
Sbjct: 127 AAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPL 186
Query: 147 LDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EK 199
+DMY K G + R++FD+ NV + N+M++G + R E+
Sbjct: 187 VDMYAKVGPIGDARRVFDEMEG------KNVVMCNTMITGLLRCKMVAEARALFEAIEER 240
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVG-------------- 241
+ +T T+++ + G + L +F M D ++ I+
Sbjct: 241 DSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 300
Query: 242 ------CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
C+E + F SALVDMYS C + A +F + + N+ W +MI GY
Sbjct: 301 AYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM------MWKNIISWTAMIVGYG 354
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N EEA+ + S + G+ D +T S + +C NL + Q H L + SG
Sbjct: 355 QNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEE--GAQFHCLALVSGLRPY 412
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
V + L+ LY + G+++ A LF + D V+W+ L+MG + G LF M++
Sbjct: 413 VTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLS 472
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ VL CS + +G+ H+ D T +ID+Y + G +
Sbjct: 473 KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLK 532
Query: 475 DGLALFKFMPE-RDVVSWTGIIVGCGQNG 502
K MP D W ++ C G
Sbjct: 533 QAEEFIKQMPRCPDAFGWATLLSACRLRG 561
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 171/458 (37%), Gaps = 138/458 (30%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV----------- 70
G+ +HC+I++ G FTG+ L+ MYA + DA ++FDEM KN+V
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223
Query: 71 --------------------SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
+WTTMVT T N + A+ ++ M G V + + + +
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEG-VGIDQYTFGS 282
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-------TRKLFDQ 163
+L AC L+ G+ IH ITR E + + + L+DMY KC S+ R ++
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342
Query: 164 YSNWAA--SAYGN-------VALWNSM------------------------LSGGKQVHA 190
+W A YG V +++ M L G Q H
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ G +L+ +Y KCG I+D LF+ M D VSWT +++G
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMG--------- 453
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
Y + +E I L +
Sbjct: 454 -------------------------------------------YAQFGKAKETIDLFEKM 470
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY-IVGSN-----LID 364
S G+ D TF L AC SR L G + D+ IV + +ID
Sbjct: 471 LSKGVKPDGVTFIGVLSAC-------SRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMID 523
Query: 365 LYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHG 401
LY+R G +K A E ++P+ D W+ L+ C G
Sbjct: 524 LYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 62/338 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG ++++GK +H I + ++F G+ L+ MY+ S+ A +F M KNI
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWT M+ Y N A+R+++ M G ++P+ F +V+ +C+ L+ G H
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDG-IKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG--------- 173
L + N L+ +Y KCGS+ +LFD+ S +W A G
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKE 462
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-RDV 232
+ L+ MLS +G + + VT ++ + G +D G + F+ M + D+
Sbjct: 463 TIDLFEKMLS-----------KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDI 511
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
V + + C ++D+YS L +A + Q A+G W +++S
Sbjct: 512 VP----LDDHYTC-------MIDLYSRSGWLKQAEEFIKQMPR-CPDAFG----WATLLS 555
Query: 293 G-----------------YVLNEQNEEAITLLSHIHSS 313
L+ QN + LL +H+S
Sbjct: 556 ACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHAS 593
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 267/485 (55%), Gaps = 25/485 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H ++ GF + SLIDMY KC +D ++ M RD VSW II G
Sbjct: 112 GEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISG--- 168
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y + +AR LF++ NV W +MI+GY E +
Sbjct: 169 ------------YVQWGQVEKARDLFEEM-----PMRRNVVCWTAMINGYGKEGDFVEML 211
Query: 305 TLLSHIHSSG--MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
+L + S + ++ T L AC L N+ L V I + L+ I+ + L
Sbjct: 212 SLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV--FIDVNKIPLNTILVTAL 269
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+Y++ G+V+ A +F + K++ +W+ +I GC + GL A L+R M + N+
Sbjct: 270 IDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNE 329
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ +VL C+ L +L G++VH + + G + I T+L+DMY KCG+IDD +F
Sbjct: 330 ITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVK 389
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
E+DV W +I+G +G ++++A F +M+++ ++PN++TF+GVLSAC H+GLVEE
Sbjct: 390 TSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEG 449
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F+SM ++GL P LEHY CMVDLLG+AG +A +L+ M PD IW ++L AC
Sbjct: 450 RVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACR 509
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGM 661
H N +L I+E ++A+ + ++LSN+YA+ G W +++VR+ K K +K +G
Sbjct: 510 IHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGC 569
Query: 662 SWIEV 666
SW+EV
Sbjct: 570 SWVEV 574
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 237/549 (43%), Gaps = 55/549 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ Q +H + + +GL +L+ D S++ A + D+ SW +++
Sbjct: 11 SLTQIHQIHAQTLIHGLPLQ----THLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIR 66
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AYT + P ++ LY ML S +P+ F + VLKACS G + G IH + R
Sbjct: 67 AYTVHGSPQNSLFLYLKMLR-SSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFG 125
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
D + N+L+DMY KC L D N W + + WNS++SG Q R
Sbjct: 126 SDLFVCNSLIDMYCKCFRL-----DSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARD 180
Query: 197 FEKE------DVTLTSLIDMYLKCGEIDDGLALF-NFMPERDVVSWTGIIVGCFECSCFT 249
+E V T++I+ Y K G+ + L+LF + D V + C +C T
Sbjct: 181 LFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACST 240
Query: 250 L-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L +AL+DMYS C + +A ++FD S N+
Sbjct: 241 LCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSC------KNL 294
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
WN++I+G V EEAI L H+ + + + T + L AC L +VH
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGAL--ELGREVH 352
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
+ +G +L+ I+ + L+D+YA+ G + A +F + +KDV W+ +I+G HG
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSL 463
+ +F M+ + N VL C+ + G+ Q + K G + +
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACM 472
Query: 464 IDMYLKCGEIDDGLALFKFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+D+ + G + + L + M D + W ++ C + R E E I + PN
Sbjct: 473 VDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSAC-RIHRNLELADKISETIMASQDPN 531
Query: 523 EITFLGVLS 531
I F +LS
Sbjct: 532 -IGFCILLS 539
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 184/492 (37%), Gaps = 140/492 (28%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S+ +G+ +H +++ G D+F N+L+ MY L+ A +D+M ++
Sbjct: 100 LKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDE 159
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHML-------------EYG----------------- 99
VSW ++++ Y + A L+ M YG
Sbjct: 160 VSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLV 219
Query: 100 ---SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
V+PN +L ACS + ++GR + I K+ +T+L+ L+DMY KCG +
Sbjct: 220 SADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDV 279
Query: 157 TR--KLFDQYSNWAASAYGNVALWNSMLSG------------------------------ 184
+ ++FD S N+ WN++++G
Sbjct: 280 EKAWRIFDGVS------CKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLV 333
Query: 185 --------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G++VH + + G + + T+L+DMY KCG+IDD +F E+
Sbjct: 334 NVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEK 393
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
DV W +I+G ++ ++A+++ M
Sbjct: 394 DVALWNAMILGL--------------------------------AYHGDGRDSLAVFSQM 421
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+ +G+ + TF L AC N +Q +
Sbjct: 422 V--------------------RAGVQPNDVTFIGVLSAC-NHSGLVEEGRVQFSSMADKH 460
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHR-LPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G + ++DL R G++K A EL L D + W L+ C H LA +
Sbjct: 461 GLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKI 520
Query: 410 FRDMINSNQDVN 421
+ I ++QD N
Sbjct: 521 -SETIMASQDPN 531
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H + G L + LIDL++ + A + + P +W+ LI T HG
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHG 72
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
+ L+ M+ S+ + F VLK CS L S+ G+Q+H ++ GF +
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCN 132
Query: 462 SLIDMYLKC-------------------------------GEIDDGLALFKFMP-ERDVV 489
SLIDMY KC G+++ LF+ MP R+VV
Sbjct: 133 SLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVV 192
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQS--RLKPNEITFLGVLSAC-------------- 533
WT +I G G+ G E ++ F++M+ S ++PN T + +LSAC
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 534 ---------------------RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
G VE+AW IF + + +L + ++ Q
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK-----NLPSWNAIITGCVQG 307
Query: 573 GCFDDAEQLIAEM---PFKPDKTIWASMLKAC 601
G ++A L M KP++ ++L AC
Sbjct: 308 GLLEEAIDLYRHMKAQSVKPNEITLVNVLSAC 339
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C +++ G+ +H + + GL ++ L+ MYA ++DA +F + +
Sbjct: 332 LVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTS 391
Query: 66 RKNIVSWTTMV--TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
K++ W M+ AY + R + A+ ++ M+ G V+PN + VL AC+ SG ++
Sbjct: 392 EKDVALWNAMILGLAYHGDGRDSLAV--FSQMVRAG-VQPNDVTFIGVLSACNHSGLVEE 448
Query: 124 GRL 126
GR+
Sbjct: 449 GRV 451
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 322/660 (48%), Gaps = 88/660 (13%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
L ++ N ++ + + DA +LF M R++ ++ M+ Y++N R A L+
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR-LIHERITREKLEYDTVLMNTLLDMYVK 152
+ P+ + Y+ +L A ++S L R L E R D+V N ++ +
Sbjct: 94 AI-----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHAN 143
Query: 153 CG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLT 205
G SL R FD + + WN ML+ + RG E + ++
Sbjct: 144 HGLVSLARHYFD------LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWN 197
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFECS----CFT 249
+L+ Y++ G++ + LF+ MP RDVVSW ++ G F+ + FT
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+A+V Y+ +L EAR++FD A N WN+M++ Y+ +EA L +
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFD------AMPERNAVSWNAMVAAYIQRRMMDEAKELFN- 310
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ C N+ ++N+ ++ YA+
Sbjct: 311 ----------------MMPCRNVASWNT------------------------MLTGYAQA 330
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G ++ A +F +P+KD V+W+ ++ ++ G + LF +M + VN+ + VL
Sbjct: 331 GMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVL 390
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ +A+L G Q+H ++ G+ +L+ MY KCG ++D F+ M ERDVV
Sbjct: 391 STCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVV 450
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G ++G KEA+ F M + KP++IT +GVL+AC H+GLVE+ + F SM
Sbjct: 451 SWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSM 510
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G+ EHY CM+DLLG+AG +A L+ +MPF+PD T+W ++L A H N +L
Sbjct: 511 HHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPEL 570
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
AE++ PE+ YV+LSN+YA+ G W K+R ++ G KK G SWIEV +
Sbjct: 571 GRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQN 630
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G LH R+I+ G F GN LL+MY ++ DA F+EM +++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSW TM+ Y + A+ +++ M+ S +P+ VL ACS SG ++ G
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFD-MMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 359/694 (51%), Gaps = 66/694 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-------------DFTSLND 56
L+ C R++ GK++H ++ ++ N+LL+MY+ ++ +
Sbjct: 79 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 138
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
K+FD M ++ +V+W T++ Y +R A++ ++ M++ G ++P+ + V A S
Sbjct: 139 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG-IKPSPVSFVNVFPAFS 197
Query: 117 LSGDLDLGRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
GD ++H + + EY D ++++ + MY + G L +K+FD
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN------CLE 251
Query: 173 GNVALWNSMLSGGKQVHAFCVK------RGFEKED-----VTLTSLIDM--YLKCGEIDD 219
N +WN+M+S Q + F ++ + E ED VTL S I +L+ E+ +
Sbjct: 252 RNTEVWNTMISAFVQ-NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAE 310
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
L F V+ + C ++AL+ MYS CN + + K+FD
Sbjct: 311 QLHAF-------VIKNVAVTQVC------VMNALIAMYSRCNSIDTSFKIFDNMPE---- 353
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V WN+MIS +V N N+EA+ L + + +DS T T+ L A +L N
Sbjct: 354 --KDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRN--PDI 409
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGC 397
Q HG ++ +G + + + S LID+YA+ G +++A +F + ++D W+ ++ G
Sbjct: 410 GKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGY 468
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
T++GL A+L+ R M++ N ++S+L C+ + GKQ+H F ++ ++
Sbjct: 469 TQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNV 528
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
T+LIDMY K G I +F E+ +V+++ +I+G GQ+G + A+ F M +S
Sbjct: 529 FVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKS 588
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P+ +T + VLSAC +AGLV+E IF SM+ Y ++P EH+ C+ D+LG+AG D
Sbjct: 589 GIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDK 648
Query: 578 AEQLIAEMPFKPD-KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK--YVMLSNV 634
A + + + K + IW S+L AC H +L ++A++LL + +V+LSN+
Sbjct: 649 AYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNI 708
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
YA W+++ VRK ++ G +K+ G SWIE++
Sbjct: 709 YAEERNWENVDIVRKQMRERGLKKETGSSWIEIA 742
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 244/510 (47%), Gaps = 42/510 (8%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVL 112
L+ A +LFD + R + V W T++ N P+ A+ Y++M V+ + + YS+VL
Sbjct: 20 LHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVL 79
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS---------------LT 157
KAC+ + +L +G+ +H R + ++ N+LL+MY C S L
Sbjct: 80 KACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLV 139
Query: 158 RKLFDQYSNWAASAYGNVALW---NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
RK+FD A+ + W + + + +K G + V+ ++ +
Sbjct: 140 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 199
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
G+ + +VV + +G + + +S+ + MY+ L A+K+FD
Sbjct: 200 GDFKNA----------NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN- 248
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSALKACINL 332
N +WN+MIS +V N + E I L + S ID T SA+ A +L
Sbjct: 249 -----CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHL 303
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
F A Q+H ++ + V + LI +Y+R ++ ++ ++F +P+KDVV+W+
Sbjct: 304 QKF--ELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNT 361
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++GLN A +LF +M + V+ ++++L S L + GKQ H + ++ G
Sbjct: 362 MISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG 421
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ E + + LIDMY K G I+ +F+ F ERD +W ++ G QNG +A
Sbjct: 422 IQFEGMD-SYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 480
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
++M+ ++ PN +T +L AC +G ++
Sbjct: 481 LRQMLDQKVMPNVVTLASILPACNPSGYID 510
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 49/433 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ A+ + + + LH +IK + N L++MY+ S++ + K+
Sbjct: 288 IDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKI 347
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M K++VSW TM++A+ N + A+ L+ M + + + +A+L A S +
Sbjct: 348 FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM-KKQDLMVDSVTVTALLSAASDLRN 406
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
D+G+ H + R ++++ + + L+DMY K G + + +F++ + S + A W
Sbjct: 407 PDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEK----SFSHERDQATW 461
Query: 179 NSMLSGGKQV----HAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFMPE 229
NSM+SG Q AF + R + VTL S++ G ID G L F
Sbjct: 462 NSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIR 521
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
D+ + + F +AL+DMYS + A +F + + ++ +++
Sbjct: 522 NDL-----------DQNVFVATALIDMYSKSGSIAHAENVFSKANE------KSIVTYST 564
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI GY + E A+ + + SG+ D+ T + L AC S L GL +
Sbjct: 565 MILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC-------SYAGLVDEGLQIF 617
Query: 350 SGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVA--WSGLIMGCTKHG 401
Y + + + D+ R G V A E L +K V W L+ C H
Sbjct: 618 ESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHK 677
Query: 402 LNSLAYLLFRDMI 414
L L+ + ++
Sbjct: 678 QFELGKLVAKKLL 690
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 361 NLIDLYARL---GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
NL+ RL G + A +LF LP+ V W+ +I+G + A L + +M +S+
Sbjct: 6 NLVHELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSS 65
Query: 418 QDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC----- 470
V + + SSVLK C+ +L GK VHA ++ I SL++MY C
Sbjct: 66 PQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTP 125
Query: 471 -GEIDDGLA-------LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
G++ G + +F M +R VV+W +I + R EA+ F M++ +KP+
Sbjct: 126 DGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPS 185
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM---VDLLGQAGCFDDAE 579
++F+ V A G + A + M + G E ++ Y + + + + GC + A+
Sbjct: 186 PVSFVNVFPAFSSLGDFKNA-NVVHGMLVKLGSE-YVNDLYVVSSAIFMYAELGCLEFAK 243
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
++ + + + +W +M+ A NN L I
Sbjct: 244 KVF-DNCLERNTEVWNTMISAF-VQNNFSLEGI 274
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 28/353 (7%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFT 323
AR+LFD A + LWN++I G V N +EA+ S++ SS + DSYT++
Sbjct: 23 ARQLFD------ALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYS 76
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS--------- 374
S LKAC + N A+ H L IV ++L+++Y+ +
Sbjct: 77 SVLKACADTRNLVVGKAVHAHFLRCL--MNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYS 134
Query: 375 ----ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++F + K+ VVAW+ LI + + A F M+ + +V
Sbjct: 135 RCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFP 194
Query: 431 VCSCLASLRRGKQVHAFCVKRGFE--KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
S L + VH VK G E + ++S I MY + G ++ +F ER+
Sbjct: 195 AFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNT 254
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFT 547
W +I QN + E I F + ++S +E+T L +SA H E A +
Sbjct: 255 EVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHA 314
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + + ++ + + D + ++ MP K D W +M+ A
Sbjct: 315 FVIKNVAV-TQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVVSWNTMISA 365
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 203/670 (30%), Positives = 326/670 (48%), Gaps = 42/670 (6%)
Query: 12 HCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS 71
H Q ++ KS H ++K G S N LL+ Y+ T L A ++FDE+ + S
Sbjct: 2 HRRQHHALAAAKS-HATLLKSGASSPT-PWNQLLTAYSA-TGLAAARRVFDEIPHPDAAS 58
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
W +++ A+ + A RL M G + + F + L++ + + +LG +
Sbjct: 59 WNSLLAAHVAAGAHRDAWRLLRAMHARG-LAASTFALGSALRSAAAARRPELGAQLQSFS 117
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
R L + + LLD+Y KCG L R++FD N+ WN++++G
Sbjct: 118 VRCGLADNVFPASALLDVYAKCGRLGDARRVFD------GMPVRNIVSWNAIIAG----- 166
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG--------IIVG 241
+ R K + ++M + G + DG + W I+
Sbjct: 167 -YTDSR---KPAEAMELFLEMQ-RVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKY 221
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
L+A + YS C+ L ++RK+FD S ++ WNSM+ Y + ++
Sbjct: 222 GSALGLVALNAAITAYSQCDALADSRKIFDGIES------RDLISWNSMLGAYAYHGLDD 275
Query: 302 EAITLLSHI-HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + SG+ D Y+FTSA+ C + + + +H L++ G E V +
Sbjct: 276 EAMRFFVRMMRESGIQPDMYSFTSAISVC-SEHGCDDQQGRSIHSLVIKFGLEGVTPVCN 334
Query: 361 NLIDLYARLGN---VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+I +Y R + ++ A F L KD V+W+ ++ G + HGL+S A FR M N
Sbjct: 335 AMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAEN 394
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
++F +S+ L+ CS LA LR G+QVH+ V+ GF D +SLI MY KCG + D
Sbjct: 395 IRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDAR 454
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F+ + V W ++ G Q+G+A+ F EM+ + + +TF+ +++A H G
Sbjct: 455 KSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGG 514
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV+E I +M+ Y + +EHY C VDL G+AG D A++LI MPF+PD +W ++
Sbjct: 515 LVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTL 574
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L AC H N +L S +A L P S YV+LS++Y+ LGMW + V+K +
Sbjct: 575 LGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALS 634
Query: 657 KKAGMSWIEV 666
K G SWIEV
Sbjct: 635 KIPGWSWIEV 644
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 322/660 (48%), Gaps = 88/660 (13%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
L ++ N ++ + + DA +LF M R++ ++ M+ Y++N R A L+
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR-LIHERITREKLEYDTVLMNTLLDMYVK 152
+ P+ + Y+ +L A ++S L R L E R D+V N ++ +
Sbjct: 94 AI-----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHAN 143
Query: 153 CG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLT 205
G SL R FD + + WN ML+ + RG E + ++
Sbjct: 144 HGLVSLARHYFD------LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFECS----CFT 249
+L+ Y++ G++ + LF+ MP RDVVSW ++ G F+ + FT
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+A+V Y+ +L EAR++FD A N WN+M++ Y+ +EA L +
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFD------AMPERNAVSWNAMVAAYIQRRMMDEAKELFN- 310
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ C N+ ++N+ ++ YA+
Sbjct: 311 ----------------MMPCRNVASWNT------------------------MLTGYAQA 330
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G ++ A +F +P+KD V+W+ ++ ++ G + LF +M + VN+ + VL
Sbjct: 331 GMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVL 390
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ +A+L G Q+H ++ G+ +L+ MY KCG ++D F+ M ERDVV
Sbjct: 391 STCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVV 450
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G ++G KEA+ F M + KP++IT +GVL+AC H+GLVE+ + F SM
Sbjct: 451 SWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSM 510
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G+ EHY CM+DLLG+AG +A L+ +MPF+PD T+W ++L A H N +L
Sbjct: 511 HHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPEL 570
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
AE++ PE+ YV+LSN+YA+ G W K+R ++ G KK G SWIEV +
Sbjct: 571 GRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQN 630
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G LH R+I+ G F GN LL+MY ++ DA F+EM +++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSW TM+ Y + A+ +++ M+ S +P+ VL ACS SG ++ G
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFD-MMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 319/647 (49%), Gaps = 83/647 (12%)
Query: 33 GLSQDIFTGNNLL--SMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
G ++ + + L+ S + F ++ ++F+ + N W M+ AY P++A
Sbjct: 5 GFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFT 64
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
LY ML + + + Y +++ACS+ + +H + + + D + NTL++ +
Sbjct: 65 LYKSMLS-NYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCF 123
Query: 151 VKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
C ++T D + S+ + WNS+L+G
Sbjct: 124 SVCSNMT----DACRVFNESSVLDSVSWNSILAG-------------------------- 153
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
Y++ G +++ +++ MPER +++ +IV F + LV EA KLF
Sbjct: 154 YIEIGNVEEAKHIYHQMPERSIIASNSMIV------LFGMRGLV---------VEACKLF 198
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ ++ W+++I+ + NE EEAI +H G+ +D SAL AC
Sbjct: 199 DEMLE------KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 252
Query: 331 NLLNFN---------------SRFALQ--------------VHGLIVTSGYELDYIVGSN 361
NLL N S LQ V + Y LD I ++
Sbjct: 253 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 312
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+I Y + V +A +F +P+KDVV+WS +I G ++ L LF++M S +
Sbjct: 313 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 372
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ + SV+ C+ LA+L +GK VHA+ + G I T+LIDMY+KCG ++ L +F
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M E+ + +W +I+G NG + ++ F M + + PNEITF+GVL ACRH GLV+E
Sbjct: 433 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 492
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F SM ++ ++P+++HY CMVDLLG+AG +AE+L+ MP PD W ++L AC
Sbjct: 493 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+ H ++++ + +L+ P+ +V+LSN+YA+ G WD + ++R
Sbjct: 553 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIR 599
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 244/536 (45%), Gaps = 51/536 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C RRS + K +H ++K G D++ N L++ ++ +++ DA ++F+E + +
Sbjct: 85 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 144
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF-----MYSAVLKACSLSGDLDLG 124
VSW +++ Y A +Y+ M E + N M V++AC L ++
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEM--- 201
Query: 125 RLIHERITREKL-------EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
L + +T L E + T + M+ K G + ++ + A SA N+ +
Sbjct: 202 -LEKDMVTWSALIACFQQNEMYEEAIRTFVGMH-KIGVMVDEVV---AVSALSACANLLV 256
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
N GK +H+ +K G E +LI MY KCG+I LF+ D++SW
Sbjct: 257 VNM----GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 312
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I G Y CN++ A+ +FD +V W+SMISGY N
Sbjct: 313 MISG---------------YLKCNLVDNAKAIFDSMPE------KDVVSWSSMISGYAQN 351
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ +E + L + SG D T S + AC L VH I +G ++ I
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ--GKWVHAYIKRNGLTINVI 409
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ LID+Y + G V++ALE+F+ + +K + W+ LI+G +GL + +F +M +
Sbjct: 410 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 469
Query: 418 QDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N+ VL C + + G+ ++ + ++D+ + G++ +
Sbjct: 470 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 529
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
L MP DV +W ++ C ++G ++ +++I+ L+P+ F +LS
Sbjct: 530 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 583
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C + GK +H +K G I N L+ MY+ + A KLFDE
Sbjct: 245 VSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL 304
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV------------------------- 101
+++SW +M++ Y + A +++ M E V
Sbjct: 305 LDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM 364
Query: 102 -----EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+P+ +V+ AC+ L+ G+ +H I R L + +L TL+DMY+KCG +
Sbjct: 365 QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCV 424
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG 184
L Y ++ WN+++ G
Sbjct: 425 ETALEVFY----GMIEKGISTWNALILG 448
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 17/247 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C + +++QGK +H I + GL+ ++ G L+ MY + A ++F
Sbjct: 372 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 431
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K I +W ++ N ++ ++++M + V PN + VL AC G +
Sbjct: 432 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNM-KKCHVTPNEITFMGVLGACRHMGLV 490
Query: 122 DLGR-LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
D G+ + I K++ + ++D+ + G L +L ++ +VA W
Sbjct: 491 DEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR-----MPMTPDVATW 545
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTS--------LIDMYLKCGEIDDGLALFNFMPER 230
++L K+ + R ++ + L L ++Y G+ DD L + M +
Sbjct: 546 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 605
Query: 231 DVVSWTG 237
V+ G
Sbjct: 606 RVLKIPG 612
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 277/545 (50%), Gaps = 65/545 (11%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
S L GG Q+HA +K GF + + +LIDMY KCG++ +F+ MPER+VVSWT +
Sbjct: 17 GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTAL 76
Query: 239 IVGCF------EC--------------SCFTLSA-------------------------- 252
+VG EC + FTLSA
Sbjct: 77 MVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEG 136
Query: 253 -------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
LV MYS +AR++FD S N+A WNSMISGY Q +++
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSR------NLATWNSMISGYAHAGQGRDSLL 190
Query: 306 LLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--DYIVGSNL 362
+ + D +TF S LKAC L +R QVH + G + I+ L
Sbjct: 191 VFREMQRRHDEQPDEFTFASLLKACSGL--GAAREGAQVHAAMAVRGVSPASNAILAGAL 248
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+Y + + A+++F L +++ + W+ +I+G + G A LFR +S +
Sbjct: 249 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 308
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++SSV+ V + A + +GKQVH + K + SL+DMYLKCG + F+
Sbjct: 309 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 368
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MP R+VVSWT +I G G++G +EAI F+EM ++ +E+ +L +LSAC H+GLV+E
Sbjct: 369 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDEC 428
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F+ + + + P EHY CMVDLLG+AG +A++LI MP +P +W ++L AC
Sbjct: 429 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 488
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
H + + + + LLA ++P YVMLSN+ A G W +R A ++ G K+ G
Sbjct: 489 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 548
Query: 662 SWIEV 666
SW EV
Sbjct: 549 SWTEV 553
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 229/519 (44%), Gaps = 53/519 (10%)
Query: 1 MDLRR-IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
M+ RR I + LR + S++ G LH ++K G D NNL+ MYA L+ A +
Sbjct: 1 MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGE 60
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M +N+VSWT ++ + + +RL+ M G+ PN F SA LKAC G
Sbjct: 61 VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNEFTLSATLKAC--GG 117
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---RKLFDQYSNWAASAYGNVA 176
G IH R E V+ N+L+ MY K G T R++FD + N+A
Sbjct: 118 GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK-GRWTGDARRVFDVIPSR------NLA 170
Query: 177 LWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLKCGEIDDGLALFNF 226
WNSM+SG G+ + V R ++ ++ T SL+ G +G +
Sbjct: 171 TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 230
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M R V + I+ AL+D+Y C+ L A ++FD N
Sbjct: 231 MAVRGVSPASNAILA---------GALLDVYVKCHRLPVAMQVFDGLERR------NAIQ 275
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----- 341
W ++I G+ Q +EA+ L SSG+ D + +S + + FAL
Sbjct: 276 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFAD-------FALVEQGK 328
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVH + LD V ++L+D+Y + G A F +P ++VV+W+ +I G KHG
Sbjct: 329 QVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHG 388
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITL 460
A LF +M + ++ ++L CS + ++ + C R +
Sbjct: 389 HGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY 448
Query: 461 TSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D+ + GE+ + L MP E V W ++ C
Sbjct: 449 ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+I+ +L+ + +SLR G Q+HA +K GF + + +LIDMY KCG++ +F M
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
PER+VVSWT ++VG +G A+E + F EM S PNE T L AC G A
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC---GGGTRAG 122
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+ G E H +V + + DA ++ +P + T W SM+
Sbjct: 123 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLAT-WNSMISGYAH 181
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ ++ ++ E P ++ S + A G+
Sbjct: 182 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGL 218
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 246/421 (58%), Gaps = 14/421 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L++MY N+L +A +LFDQ NV W +MIS Y + +++A+ LL
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQ------RNVISWTTMISAYSKCKIHQKALELL 150
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + + YT++S L++C + + +H I+ G E D V S LID++A
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVR-----MLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+LG + AL +F + D + W+ +I G ++ + +A LF+ M + Q ++S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL+ C+ LA L G Q H VK ++++ I +L+DMY KCG ++D L +F M ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V++W+ +I G QNG ++EA+ F+ M S KPN IT +GVL AC HAGL+E+ W F
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK YG++P EHY CM+DLLG+AG DDA +L+ EM +PD W ++L AC N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
L A++++A PED Y +LSN+YA WDS+ ++R + G +K+ G SWIEV
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 667 S 667
+
Sbjct: 504 N 504
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 142/277 (51%), Gaps = 52/277 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
E ++ C R++ +G +L CR + + G +F N L++MY F LNDAH+LFD+M +
Sbjct: 66 ELIKCCISNRAVHEG-NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N++SWTTM++AY+ K A+ L ML +V PN + YS+VL++C+ D+ R+
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDV---RM 180
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+H I +E LE D + + L+D++ K G D S + G+ +WNS++ G
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPE----DALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 187 Q-----VHAFCVKR----GFEKEDVTLTS------------------------------- 206
Q V KR GF E TLTS
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 207 --LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+DMY KCG ++D L +FN M ERDV++W+ +I G
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K C ++ G + G + LI+MY+K ++D LF MP+
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--------HAG 537
R+V+SWT +I + ++A+ M++ ++PN T+ VL +C H G
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCG 184
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+++E GLE + ++D+ + G +DA + EM D +W S+
Sbjct: 185 IIKE------------GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSI 231
Query: 598 LK----------ACETHNNTKLVSIIAEQLLATS 621
+ A E K IAEQ TS
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 334/679 (49%), Gaps = 53/679 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S G ++H +IK G N+ + Y + L+ A + FD K+
Sbjct: 55 LKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113
Query: 70 VSWTTMVTAYTSNKRPN----WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW MV SN W I+ + +PN V++A G
Sbjct: 114 VSWNVMVHGNFSNGSIMAGLCWFIKG-----RFAHFQPNISSLLLVIQAFRELKIYSQGF 168
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS-LTRKLFDQYSNWAASAYGNVALWNSMLSG 184
H I R + N+LL +Y + KLF + S +V W+ M+ G
Sbjct: 169 AFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFAYKLFGEMS-----VRNDVVSWSVMIGG 223
Query: 185 ----GKQVHAFCVKR------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ F + R G + VT+ S++ +I G +
Sbjct: 224 FVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGL-------- 275
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+I E F ++L+DMYS C + A K F + N+ WN M+S Y
Sbjct: 276 ---VIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE------KNIISWNLMLSAY 326
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+LNE + EA+ LL + G D T + L+ + L+ S VHG+I+ GYE
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLD--SLKCRSVHGVIIRKGYES 384
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ ++ +++ID YA+ V+ A +F + KKDVVAWS +I G ++G A +F+ M
Sbjct: 385 NELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM- 443
Query: 415 NSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
N++V N I ++++ C+ A LR+ K H V+RG E TS+IDMY KCG+
Sbjct: 444 --NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGD 501
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
I+ + F +P+++VV W+ +I NG A EA+ F+++ Q+ KPN +T L +LSA
Sbjct: 502 IEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSA 561
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPD 590
C H GL+EE + FTSM ++G+EP LEHY C+VD+L +AG F++A +LI ++P +
Sbjct: 562 CSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAG 621
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+IW ++L +C ++ N L S A ++L P + Y++ SN+YA G+ +K+R+
Sbjct: 622 ASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRL 681
Query: 651 GKKLGEK-KAGMSWIEVSS 668
K+ G K AG S + ++S
Sbjct: 682 AKEKGVKVVAGYSLVHINS 700
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 187/443 (42%), Gaps = 96/443 (21%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L+ C + I G +H +I GL D+F GN+L+ MY+ +++ A K F E+
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KNI+SW M++AY N+ A+ L M+ G+ E + + VL+ D R
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGA-EKDEVTLANVLQIAKHFLDSLKCR 371
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYG----- 173
+H I R+ E + +L+N+++D Y KC L R +FD + W+ G
Sbjct: 372 SVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNG 431
Query: 174 -------------------NVALWNSM--------LSGGKQVHAFCVKRGFEKEDVTLTS 206
NV++ N M L K H V+RG E TS
Sbjct: 432 KPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTS 491
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+IDMY KCG+I+ + FN +P+++VV W+ +I S F ++ L EA
Sbjct: 492 IIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMI------SAFRINGLAH---------EA 536
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
LF++ AL +LLS G+ + +F +++
Sbjct: 537 LMLFEKIKQNGTKPNAVTAL------------------SLLSACSHGGLIEEGLSFFTSM 578
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK- 385
+Q HG + G E Y S ++D+ +R G ALEL +LPK+
Sbjct: 579 --------------VQKHG--IEPGLE-HY---SCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 386 --DVVAWSGLIMGCTKHGLNSLA 406
W L+ C +G SL
Sbjct: 619 EAGASIWGTLLSSCRSYGNISLG 641
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 142/315 (45%), Gaps = 33/315 (10%)
Query: 301 EEAITLLSHIHSSGMCI-DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+EA+ L I SG + D++ S LKAC N +FN +HG ++ G + +
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFN--LGTAMHGCLIKQGCQSSTSIA 85
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++ ID Y + G++ SA F KD V+W+ ++ G +G + +A L + I
Sbjct: 86 NSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNG-SIMAGLCW--FIKGRFA 142
Query: 420 VNQFIISSVLKVCSCLASLR---RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
Q ISS+L V L+ +G H + + GF SL+ +Y + +
Sbjct: 143 HFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFA 201
Query: 477 LALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACR 534
LF M R DVVSW+ +I G Q G ++ F+ M+ ++ + P+ +T + VL AC
Sbjct: 202 YKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACT 261
Query: 535 H-----AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK- 588
+ G + IF GLE L ++D+ + CF+ A FK
Sbjct: 262 NLKDISLGTMVHGLVIFR------GLEDDLFVGNSLIDMYSK--CFNVHSAFKA---FKE 310
Query: 589 -PDKTI--WASMLKA 600
P+K I W ML A
Sbjct: 311 IPEKNIISWNLMLSA 325
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 246/421 (58%), Gaps = 14/421 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L++MY N+L +A +LFDQ NV W +MIS Y + +++A+ LL
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQ------RNVISWTTMISAYSKCKIHQKALELL 150
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + + YT++S L++C + + +H I+ G E D V S LID++A
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVR-----MLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+LG + AL +F + D + W+ +I G ++ + +A LF+ M + Q ++S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL+ C+ LA L G Q H VK ++++ I +L+DMY KCG ++D L +F M ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V++W+ +I G QNG ++EA+ F+ M S KPN IT +GVL AC HAGL+E+ W F
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK YG++P EHY CM+DLLG+AG DDA +L+ EM +PD W ++L AC N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
L A++++A PED Y +LSN+YA WDS+ ++R + G +K+ G SWIEV
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 667 S 667
+
Sbjct: 504 N 504
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 142/277 (51%), Gaps = 52/277 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
E ++ C R++ +G +L CR + + G +F N L++MY F LNDAH+LFD+M +
Sbjct: 66 ELIKCCISNRAVHEG-NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N++SWTTM++AY+ K A+ L ML +V PN + YS+VL++C+ D+ R+
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDV---RM 180
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+H I +E LE D + + L+D++ K G D S + G+ +WNS++ G
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPE----DALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 187 Q-----VHAFCVKR----GFEKEDVTLTS------------------------------- 206
Q V KR GF E TLTS
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 207 --LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+DMY KCG ++D L +FN M ERDV++W+ +I G
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K C ++ G + G + LI+MY+K ++D LF MP+
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--------HAG 537
R+V+SWT +I + ++A+ M++ ++PN T+ VL +C H G
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCG 184
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+++E GLE + ++D+ + G +DA + EM D +W S+
Sbjct: 185 IIKE------------GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSI 231
Query: 598 LK----------ACETHNNTKLVSIIAEQLLATS 621
+ A E K IAEQ TS
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 192/669 (28%), Positives = 309/669 (46%), Gaps = 120/669 (17%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
EP+ Y++++ AC+ LD + IH+ + + + +L N +++MY KCGS+ RK
Sbjct: 158 EPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARK 215
Query: 160 LFDQYSNWAASAYGNVALWNSMLSG----------------------------------- 184
+FD NV W SM+SG
Sbjct: 216 VFD------TMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKA 269
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G+Q+HA +K F + +LI MY G+I+ +F +P +D++SW
Sbjct: 270 CYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISW 329
Query: 236 ----TG---------------------------IIVGCFECSC----------------- 247
TG I G +C
Sbjct: 330 GTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCV 389
Query: 248 --------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
F +L DMY+ L A+ F Q + ++ WN++I+ + N
Sbjct: 390 KFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKN------PDIVSWNAIIAAFADNGD 443
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EAI + G+ DS T+ S L C + + N Q+H IV G++ + V
Sbjct: 444 ANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQ--GRQIHSYIVKIGFDKEITVC 501
Query: 360 SNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++L+ +Y + ++ AL +F + + ++V+W+ ++ C + + L+++M S
Sbjct: 502 NSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN 561
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ I+++L C+ L SL G QVH + +K G + LIDMY KCG +
Sbjct: 562 KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F D+VSW+ +IVG Q G EA+ F+ M ++PNE+T+LG LSAC H GL
Sbjct: 622 VFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGL 681
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
VEE W ++ SM+ E+G+ P EH+ C+VDLL +AGC +AE I + D T W ++L
Sbjct: 682 VEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLL 741
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
AC+THNN + A +L P + + VML N++A+ G W+ ++K+RK K++G +K
Sbjct: 742 AACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQK 801
Query: 658 KAGMSWIEV 666
G SWIEV
Sbjct: 802 VPGQSWIEV 810
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 199/494 (40%), Gaps = 114/494 (23%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
++ C I G+ LH +IK + + N L+SMY +F + A +F + K+
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++SW TM+T Y A+ L+ +L G+ +PN F++ +V ACS +L+ G+ +H
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVH 385
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--SAYGN----- 174
+ L + +L DMY K G L + F Q N W A +A+ +
Sbjct: 386 GMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 445
Query: 175 --VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+ + M L+ G+Q+H++ VK GF+KE SL+
Sbjct: 446 EAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLL 505
Query: 209 DMYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFE----------------------- 244
MY KC + D L +F + ++VSW I+ C +
Sbjct: 506 TMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDS 565
Query: 245 ---------CS------------CFTL-----------SALVDMYSNCNVLCEARKLFDQ 272
C+ C+++ + L+DMY+ C L AR +FD
Sbjct: 566 ITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDS 625
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--I 330
+ ++ W+S+I GY EA+ L + + G+ + T+ AL AC I
Sbjct: 626 TQNL------DIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHI 679
Query: 331 NLLNFNSRFALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
L+ R + HG+ T + S ++DL AR G + A + D
Sbjct: 680 GLVEEGWRLYKSMETEHGIPPTREH------FSCIVDLLARAGCLHEAETFIQKSGLDAD 733
Query: 387 VVAWSGLIMGCTKH 400
+ AW L+ C H
Sbjct: 734 ITAWKTLLAACKTH 747
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 153/294 (52%), Gaps = 7/294 (2%)
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
H+ +S + T+TS + AC N + + +A ++H ++ S Y+ I+ +++I++Y +
Sbjct: 149 HLKNSNSHFEPSTYTSLVLACANFRSLD--YAKKIHDHVLKSNYQPSIILQNHMINMYGK 206
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G++K A ++F + +VV+W+ +I G +++G + A +++ M S Q +Q SV
Sbjct: 207 CGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSV 266
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+K C + G+Q+HA +K F + +LI MY G+I+ +F +P +D+
Sbjct: 267 IKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDL 326
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVE-EAWTIF 546
+SW +I G Q G EA+ F++++ Q +PNE F V SAC + L+E E
Sbjct: 327 ISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC--SSLLELEYGKQV 384
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
M ++GL ++ + D+ + G A+ ++ PD W +++ A
Sbjct: 385 HGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIAA 437
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 41/326 (12%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-NIVS 71
CG + QG+ +H I+K G ++I N+LL+MY + L+DA +F +++R N+VS
Sbjct: 473 CGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVS 532
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
W +++A K+ RLY M + +P+ + +L C+ L +G +H
Sbjct: 533 WNAILSACLQKKQEGETFRLYKEM-HFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYS 591
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
+ L D + N L+DMY KCGSL R +FD N ++ W+S++ G Q
Sbjct: 592 IKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNL------DIVSWSSLIVGYAQCG 645
Query: 188 -------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ G + +VT + G +++G L+ M + T
Sbjct: 646 LGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHF 705
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQ------YSSW-----AASAYGNVALWNS 289
C +VD+ + L EA + ++W A + NV +
Sbjct: 706 SC----------IVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAER 755
Query: 290 MISGYV-LNEQNEEAITLLSHIHSSG 314
+ L+ N A+ +L +IH+S
Sbjct: 756 GAGNILKLDPSNSAAMVMLCNIHASA 781
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 354 LDYIVGSNLIDLYARL-GNVKSALE--LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
YI+ + ++ R+ VK +L+ +F L K++ S +I C +H
Sbjct: 89 FKYIISMTIHSVFRRMYSYVKPSLQPAIFSNL-SKELPTNSYIIFLCKQHHYKEALEAFD 147
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+ NSN +S++ C+ SL K++H +K ++ I +I+MY KC
Sbjct: 148 FHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKC 207
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G + D +F M +VVSWT +I G QNG+A +AI + +M +S P+++TF V+
Sbjct: 208 GSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVI 267
Query: 531 SACRHAGLVEEAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
AC AG ++ + +K +G HL ++ + G + A + +P K
Sbjct: 268 KACYIAGDIDLGRQLHAHVIKSWFG--HHLTSQNALISMYTNFGQIEHASNVFTRIPTK- 324
Query: 590 DKTIWASML 598
D W +M+
Sbjct: 325 DLISWGTMI 333
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C + S+ G +HC IK GL D+ N L+ MYA SL A +FD
Sbjct: 568 ITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQ 627
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
+IVSW++++ Y + A+ L+ M G V+PN Y L ACS G ++ G
Sbjct: 628 NLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG-VQPNEVTYLGALSACSHIGLVEEGW 686
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLS 183
RL T + + ++D+ + G L + F Q S A ++ W ++L+
Sbjct: 687 RLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDA----DITAWKTLLA 742
Query: 184 GGK 186
K
Sbjct: 743 ACK 745
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 197/741 (26%), Positives = 334/741 (45%), Gaps = 113/741 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG +R++ G+ +H I+ L+++ G + MYA + A LFD M +
Sbjct: 57 LRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRP 116
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
W ++ + + RP + LY M +E GFM++ V AC DL GR IH
Sbjct: 117 FCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV--ACGRIKDLAQGRSIH 174
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS--- 183
R+ + ++ + + L+ MY +CG L FD A WN+++S
Sbjct: 175 YRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELG------TAPWNAIMSALA 227
Query: 184 ---------------------------------------GGKQVHAFCVKRGFEKEDVTL 204
GG Q+H + L
Sbjct: 228 GAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT--------------- 249
+LI MY++CG++D+ L +F MP R+VVSWT +I + ++
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGIN 347
Query: 250 ---------LSALVDMYSNCNVLCEARKLFDQYSSWAASA-----------YGNVAL--- 286
+SA+ + + +L RK+ Q ++ A Y L
Sbjct: 348 PNEKTYASVVSAIAHLGRDA-ILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAE 406
Query: 287 -----------------WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
+ +MI+ Y N +A+ + + + G+ + TF + L AC
Sbjct: 407 AREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAAC 466
Query: 330 INLLNFNSRFALQVHGLIVTSGYE-LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+ + + S +H ++ SG + D ++L+D+YA+ G++ A +F + KD+V
Sbjct: 467 VAIGDLAS--GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLV 524
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
AW+ +I + G N A L+ M+ S + +S++L C+ L L G+++H
Sbjct: 525 AWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQA 584
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
++ E++ +L MY KCG ++ L++ DV +WT ++ Q G A A+
Sbjct: 585 LRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVAL 644
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ EM ++PNE+TF+ VL +C AGLV E F S+ +YG +P EH+ CMVD+
Sbjct: 645 ELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDV 704
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AG DAE+L+ MPF PD+ W S+L +C+ H + ++ + AE LL PE S++
Sbjct: 705 LGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQF 764
Query: 629 VMLSNVYATLGMWDSLSKVRK 649
V LS +YA G + ++++
Sbjct: 765 VALSQIYAAAGRNSDIDEIKR 785
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 183/408 (44%), Gaps = 36/408 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V A+ H G+ + +G+ +H +I G+ D N+L++MYA L +A ++FD +
Sbjct: 356 VVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSIL 415
Query: 66 R--KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
K +VS+TTM+ AY N P A+ ++ M G V PN ++ VL AC GDL
Sbjct: 416 ENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARG-VAPNEITFATVLAACVAIGDLAS 474
Query: 124 GRLIHERITREKLE-YDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNV 175
G IHER+ L+ D N+L+DMY KCG L ++F+ W NV
Sbjct: 475 GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANV 534
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
N+ ++ ++ G + TL++L+ + C + D LA+ + + + S
Sbjct: 535 QSGNN--RAALDLYDRMLQSGIHPDIATLSTLL---VACANLGD-LAMGEKIHRQALRSK 588
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
E +AL MY+ C L +A +L+ + +VA W SM++ +
Sbjct: 589 -------LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRG------SDVATWTSMLAAHS 635
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYE 353
A+ L + + S G+ + TF L +C L+ F H + G +
Sbjct: 636 QQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREF---FHSITSDYGSQ 692
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++D+ R G ++ A EL +P D +AW L+ C H
Sbjct: 693 PSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLH 740
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LL D + + +++L+ C +L G++VHA V R + + + MY
Sbjct: 36 LLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMY 95
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+C D +ALF MP+R W ++ R ++ + ++ M +P+ F+
Sbjct: 96 ARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFM 155
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG-------CFDDAEQ 580
+ AC + + +I + G+ ++ +V + Q G FDD +
Sbjct: 156 WAIVACGRIKDLAQGRSIHYRVATGRGINSSIQS--ALVTMYAQCGRIDLAMAAFDDNRE 213
Query: 581 L 581
L
Sbjct: 214 L 214
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 300/572 (52%), Gaps = 34/572 (5%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYS 165
++++LK C+ GDL GR +H ++ ++ + + L +MY KC + R++FD+
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ WN++++G + G + + + ++ M + GE D + L +
Sbjct: 122 ------VRDRVAWNALVAG-------YARNGLAR--MAMEMVVRMQEEEGERPDSITLVS 166
Query: 226 FMPERDVV--------SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+P + I E +A++D Y C + AR +FD W
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD----WM 222
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ N WN+MI GY N + EA+ L + + G+ + + +AL+AC L +
Sbjct: 223 PTK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
++VH L+V G + + V + LI +Y++ V A +F L ++ V+W+ +I+GC
Sbjct: 281 --GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++G + A LF M N + F + SV+ + ++ + + +H + ++ +++
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
LT+LIDMY KCG ++ LF ER V++W +I G G +G K A+ F+EM
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ PNE TFL VLSAC HAGLV+E FTSMK +YGLEP +EHY MVDLLG+AG D+
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A I +MP P +++ +ML AC+ H N +L A+++ P++ +V+L+N+YA
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
MW +++VR A +K G +K G S I++ +
Sbjct: 579 ASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 186/498 (37%), Gaps = 114/498 (22%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR L+ C R + G+++H ++ G+ + L +MYA DA ++FD
Sbjct: 59 LRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFD 118
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M ++ V+W +V Y N A+ + M E P+ +VL AC+ + L
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAASAYG-- 173
R H R LE + +LD Y KCG + R +FD +W A G
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238
Query: 174 -------NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDV 202
+AL+N M L G +VH V+ G +
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC--------------- 247
+ +LI MY KC +D +F+ + R VSW +I+GC + C
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 248 -----FTL-----------------------------------SALVDMYSNCNVLCEAR 267
FTL +AL+DMY+ C + AR
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
LF+ ++ +V WN+MI GY + + A+ L + S G+ + TF S L
Sbjct: 419 ILFN------SARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLS 472
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGS------NLIDLYARLGNVKSALELFHR 381
AC S L G + + DY + ++DL R G + A +
Sbjct: 473 AC-------SHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQK 525
Query: 382 LPKKDVVAWSGLIMGCTK 399
+P ++ G ++G K
Sbjct: 526 MPMDPGLSVYGAMLGACK 543
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 196/692 (28%), Positives = 329/692 (47%), Gaps = 88/692 (12%)
Query: 41 GNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
G +++ Y + + A + + + V W ++ + R + AI + ML G+
Sbjct: 92 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 151
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK- 159
P+ F VLKAC G H I E + + N L+ MY +CGSL
Sbjct: 152 -RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 160 -LFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
+FD+ + +V WNS++S
Sbjct: 211 MIFDEITQ---RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267
Query: 185 ----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
K+VH ++ G + +LID Y KCG +++ + +FN M
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+DVVSW ++ G YS A +LF + +V W
Sbjct: 328 FKDVVSWNAMVAG---------------YSQSGNFEAAFELFKNMRK--ENIPLDVVTWT 370
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL-- 346
++I+GY + EA+ L + SG + T S L AC +L F+ + + L
Sbjct: 371 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 430
Query: 347 -IVT-----SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCT 398
++T G + D +V + LID+Y++ + K+A +F +P +++VV W+ +I G
Sbjct: 431 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 490
Query: 399 KHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++G ++ A LF +MI+ V N + IS +L C+ LA++R GKQ+HA+ ++ +
Sbjct: 491 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYES 550
Query: 457 DITLTS--LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ LIDMY KCG++D +F M ++ +SWT ++ G G +GR EA+ F +M
Sbjct: 551 SAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 610
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
++ P++ITFL VL AC H G+V++ + F SM +YGL P EHY C +DLL ++G
Sbjct: 611 RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGR 670
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
D A + + +MP +P +W ++L AC H+N +L +L+ + E+ Y ++SN+
Sbjct: 671 LDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 730
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
YAT G W ++++R KK G +K+ G SW++
Sbjct: 731 YATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 762
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 145/608 (23%), Positives = 247/608 (40%), Gaps = 115/608 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ CG+ S + G + H I G ++F N L++MY+ SL +A +FDE+ ++
Sbjct: 162 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 221
Query: 68 -NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG-----FMYSAVLKACSLSGDL 121
+++SW ++V+A+ + A+ L++ M +P +L AC +
Sbjct: 222 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 281
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
+ +H R D + N L+D Y KCG + K+F+ + +V WN
Sbjct: 282 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME------FKDVVSWN 335
Query: 180 SMLSGGKQV----HAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFM--- 227
+M++G Q AF + + KE+ VT T++I Y + G + L LF M
Sbjct: 336 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395
Query: 228 -PERDVVSWTGIIVGCFECSCFT------------------------------LSALVDM 256
+ V+ ++ C F+ +AL+DM
Sbjct: 396 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS--G 314
YS C AR +FD NV W MI G+ + +A+ L + S G
Sbjct: 456 YSKCRSFKAARSIFDDIP----LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 511
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELD-YIVGSNLIDLYARLGNV 372
+ ++YT + L AC +L R Q+H ++ YE Y V + LID+Y++ G+V
Sbjct: 512 VAPNAYTISCILMACAHLAAI--RIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 569
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+A +F + +K ++W+ ++ G HG S A +F M
Sbjct: 570 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM------------------- 610
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
K GF +DIT ++ CG +D GL+ F M ++
Sbjct: 611 ----------------RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPR 654
Query: 493 GIIVGC-----GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR---HAGLVEEAWT 544
C ++GR +A ++M ++P + ++ +LSACR + L E A
Sbjct: 655 AEHYACAIDLLARSGRLDKAWRTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALN 711
Query: 545 IFTSMKPE 552
M E
Sbjct: 712 KLVEMNAE 719
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 184/531 (34%), Gaps = 168/531 (31%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ IV L CG +++ Q K +H I+ G D+F GN L+ YA + +A K+F
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323
Query: 62 DEMARKNIVSWTTMVTAYTSN-------------KRPN-------W-------------- 87
+ M K++VSW MV Y+ + ++ N W
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 88 -AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL---------- 136
A+ L+ M+ GS+ PN +VL AC+ G G IH + L
Sbjct: 384 EALNLFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 442
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
+ D ++ N L+DMY KC S R +FD NV W M+ G
Sbjct: 443 DEDLMVYNALIDMYSKCRSFKAARSIFDDIP----LEERNVVTWTVMIGGHAQYGDSNDA 498
Query: 185 ------------------------------------GKQVHAFCVKRGFEKEDVTLTS-- 206
GKQ+HA+ ++ + +
Sbjct: 499 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 558
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LIDMY KCG++D +F+ M ++ +SWT ++ G
Sbjct: 559 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG------------------------- 593
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
Y ++ + EA+ + + +G D TF L
Sbjct: 594 ---------------------------YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 626
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFH 380
AC S + GL DY + IDL AR G + A
Sbjct: 627 YAC-------SHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVK 679
Query: 381 RLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI--NSNQDVNQFIISSV 428
+P + V W L+ C H LA ++ N+ D + +IS++
Sbjct: 680 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 730
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 11/258 (4%)
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ ++ Y G AL + R+ V W+ LI K G A + M+ +
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ F + VLK C L S R G H GFE +L+ MY +CG +++
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 478 ALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAYFQEM--IQSRLKPNE----ITFLG 528
+F + +R DV+SW I+ ++ A A+ F +M I NE I+ +
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+L AC V + + + G P + ++D + G ++A ++ M FK
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAI-RNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329
Query: 589 PDKTIWASMLKACETHNN 606
D W +M+ N
Sbjct: 330 -DVVSWNAMVAGYSQSGN 346
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 253/433 (58%), Gaps = 12/433 (2%)
Query: 237 GIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+I+ C F F + L+ MY+NC + AR++FD+ S NV WNSM +GY
Sbjct: 148 ALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE------RNVRTWNSMFAGYT 201
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ EE + L + + D T S L AC L + ++ + G + +
Sbjct: 202 KSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADL--ELGEWINRYVEEKGLKGN 259
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+ ++L+D+YA+ G V +A LF ++ ++DVVAWS +I G ++ A LF +M
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEID 474
+N D N+ + S+L C+ L +L GK VH F +K+ K +TL T+L+D Y KCG ++
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVH-FFIKKKRMKLTVTLGTALMDFYAKCGSVE 378
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ +F MP ++V+SWT +I G NG+ K+A+ YF M++ ++PN++TF+GVLSAC
Sbjct: 379 SSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACS 438
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAGLV+E +F SM ++G+EP +EHY CMVD+LG+AG ++A Q I MP +P+ IW
Sbjct: 439 HAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIW 498
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L +C+ H N ++ +QL+ P Y++LSN+YA++G W+ KVR K+
Sbjct: 499 RTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEK 558
Query: 655 GEKK-AGMSWIEV 666
G KK G S IE+
Sbjct: 559 GIKKTPGCSLIEL 571
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 10/334 (2%)
Query: 261 NVLCEARKLFDQYSSWAASAYGNV-----ALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
N+L A L +A S + + +N MI G+ L + EAI L +H + +
Sbjct: 61 NLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSV 120
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D +TF LK C L + Q+H LI+ G+ V + LI +YA G V+ A
Sbjct: 121 QPDEFTFPCILKVCSRLQALSE--GEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVA 178
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F + +++V W+ + G TK G LF +M+ + ++ + SVL C L
Sbjct: 179 RRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRL 238
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
A L G+ ++ + ++G + +TSL+DMY KCG++D LF M RDVV+W+ +I
Sbjct: 239 ADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMI 298
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYG 554
G Q R +EA+ F EM ++ + PNEIT + +LS+C G +E W F K
Sbjct: 299 SGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMK 358
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
L L ++D + G + + ++ +MP K
Sbjct: 359 LTVTLG--TALMDFYAKCGSVESSIEVFGKMPVK 390
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 215/534 (40%), Gaps = 111/534 (20%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF--TSLNDAHKLFDEMARKNIVSW 72
Q ++I+ +H +IK L NLL A TS++ A +F ++ + ++
Sbjct: 33 QCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAY 92
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+ +T + P+ AI L+ M E SV+P+ F + +LK CS L G IH I
Sbjct: 93 NIMIRGFTLKQSPHEAILLFKEMHE-NSVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151
Query: 133 REKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ + NTL+ MY CG + R++FD+ S NV WNSM +G
Sbjct: 152 KCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE------RNVRTWNSMFAGYTKSGN 205
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
G+ ++ + ++G + +TS
Sbjct: 206 WEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITS 265
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+DMY KCG++D LF+ M RDVV+W+ +I G YS + EA
Sbjct: 266 LVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISG---------------YSQASRCREA 310
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
LF + + + + + T S L
Sbjct: 311 LDLFHE-------------------------------------MQKANIDPNEITMVSIL 333
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+C L + VH I +L +G+ L+D YA+ G+V+S++E+F ++P K+
Sbjct: 334 SSCAVLGALET--GKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKN 391
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V++W+ LI G +G A F M+ N + N VL CS + G+ +
Sbjct: 392 VLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFV 451
Query: 447 FCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ G E ++D+ + G I++ K MP + + V W ++ C
Sbjct: 452 SMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASC 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 47/275 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++ +G+ +H I+K G F N L+ MYA+ + A ++FDEM+ +N+
Sbjct: 131 LKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNV 190
Query: 70 VSWTTMVTAYTSNKRPNW--AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+W +M YT K NW ++L++ MLE + + +VL AC DL+LG I
Sbjct: 191 RTWNSMFAGYT--KSGNWEEVVKLFHEMLEL-DIRFDEVTLVSVLTACGRLADLELGEWI 247
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--SAYGNVA-- 176
+ + + L+ + L+ +L+DMY KCG + R+LFDQ W+A S Y +
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307
Query: 177 -----LWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTL-TS 206
L++ M L GK VH F +K+ K VTL T+
Sbjct: 308 REALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH-FFIKKKRMKLTVTLGTA 366
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+D Y KCG ++ + +F MP ++V+SWT +I G
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQG 401
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 117/231 (50%), Gaps = 14/231 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG+ ++ G+ ++ + + GL + +L+ MYA ++ A +LFD+M
Sbjct: 228 LVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD 287
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R+++V+W+ M++ Y+ R A+ L+ H ++ +++PN ++L +C++ G L+ G+
Sbjct: 288 RRDVVAWSAMISGYSQASRCREALDLF-HEMQKANIDPNEITMVSILSSCAVLGALETGK 346
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H I +++++ L L+D Y KCGS+ + + NV W ++ G
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI----EVFGKMPVKNVLSWTVLIQGL 402
Query: 185 -----GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
GK+ + +++ E DVT ++ G +D+G LF M
Sbjct: 403 ASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 196/692 (28%), Positives = 329/692 (47%), Gaps = 88/692 (12%)
Query: 41 GNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
G +++ Y + + A + + + V W ++ + R + AI + ML G+
Sbjct: 99 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 158
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK- 159
P+ F VLKAC G H I E + + N L+ MY +CGSL
Sbjct: 159 -RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 160 -LFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
+FD+ + +V WNS++S
Sbjct: 218 MIFDEITQ---RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274
Query: 185 ----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
K+VH ++ G + +LID Y KCG +++ + +FN M
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+DVVSW ++ G YS A +LF + +V W
Sbjct: 335 FKDVVSWNAMVAG---------------YSQSGNFEAAFELFKNMRK--ENIPLDVVTWT 377
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL-- 346
++I+GY + EA+ L + SG + T S L AC +L F+ + + L
Sbjct: 378 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 437
Query: 347 -IVT-----SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCT 398
++T G + D +V + LID+Y++ + K+A +F +P +++VV W+ +I G
Sbjct: 438 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 497
Query: 399 KHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++G ++ A LF +MI+ V N + IS +L C+ LA++R GKQ+HA+ ++ +
Sbjct: 498 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYES 557
Query: 457 DITLTS--LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ LIDMY KCG++D +F M ++ +SWT ++ G G +GR EA+ F +M
Sbjct: 558 SAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 617
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
++ P++ITFL VL AC H G+V++ + F SM +YGL P EHY C +DLL ++G
Sbjct: 618 RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGR 677
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
D A + + +MP +P +W ++L AC H+N +L +L+ + E+ Y ++SN+
Sbjct: 678 LDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 737
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
YAT G W ++++R KK G +K+ G SW++
Sbjct: 738 YATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 769
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 145/608 (23%), Positives = 247/608 (40%), Gaps = 115/608 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ CG+ S + G + H I G ++F N L++MY+ SL +A +FDE+ ++
Sbjct: 169 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 228
Query: 68 -NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG-----FMYSAVLKACSLSGDL 121
+++SW ++V+A+ + A+ L++ M +P +L AC +
Sbjct: 229 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 288
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
+ +H R D + N L+D Y KCG + K+F+ + +V WN
Sbjct: 289 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME------FKDVVSWN 342
Query: 180 SMLSGGKQV----HAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFM--- 227
+M++G Q AF + + KE+ VT T++I Y + G + L LF M
Sbjct: 343 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 402
Query: 228 -PERDVVSWTGIIVGCFECSCFT------------------------------LSALVDM 256
+ V+ ++ C F+ +AL+DM
Sbjct: 403 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 462
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS--G 314
YS C AR +FD NV W MI G+ + +A+ L + S G
Sbjct: 463 YSKCRSFKAARSIFDDI----PLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 518
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELD-YIVGSNLIDLYARLGNV 372
+ ++YT + L AC +L R Q+H ++ YE Y V + LID+Y++ G+V
Sbjct: 519 VAPNAYTISCILMACAHLAAI--RIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 576
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+A +F + +K ++W+ ++ G HG S A +F M
Sbjct: 577 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM------------------- 617
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
K GF +DIT ++ CG +D GL+ F M ++
Sbjct: 618 ----------------RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPR 661
Query: 493 GIIVGC-----GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR---HAGLVEEAWT 544
C ++GR +A ++M ++P + ++ +LSACR + L E A
Sbjct: 662 AEHYACAIDLLARSGRLDKAWRTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALN 718
Query: 545 IFTSMKPE 552
M E
Sbjct: 719 KLVEMNAE 726
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 184/531 (34%), Gaps = 168/531 (31%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ IV L CG +++ Q K +H I+ G D+F GN L+ YA + +A K+F
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330
Query: 62 DEMARKNIVSWTTMVTAYTSN-------------KRPN-------W-------------- 87
+ M K++VSW MV Y+ + ++ N W
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 88 -AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL---------- 136
A+ L+ M+ GS+ PN +VL AC+ G G IH + L
Sbjct: 391 EALNLFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 449
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
+ D ++ N L+DMY KC S R +FD NV W M+ G
Sbjct: 450 DEDLMVYNALIDMYSKCRSFKAARSIFDDI----PLEERNVVTWTVMIGGHAQYGDSNDA 505
Query: 185 ------------------------------------GKQVHAFCVKRGFEKEDVTLTS-- 206
GKQ+HA+ ++ + +
Sbjct: 506 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 565
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LIDMY KCG++D +F+ M ++ +SWT ++ G
Sbjct: 566 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG------------------------- 600
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
Y ++ + EA+ + + +G D TF L
Sbjct: 601 ---------------------------YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 633
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFH 380
AC S + GL DY + IDL AR G + A
Sbjct: 634 YAC-------SHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVK 686
Query: 381 RLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI--NSNQDVNQFIISSV 428
+P + V W L+ C H LA ++ N+ D + +IS++
Sbjct: 687 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 737
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 132/344 (38%), Gaps = 43/344 (12%)
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL------------QVHGLIVTSG 351
I++L ++ + I + + A ACI + + S FA Q+H I+ SG
Sbjct: 12 ISMLLNLPKAVKPIGEWFLSGARAACIGVDVYPSHFASLLKECKSANTVHQIHQQIIASG 71
Query: 352 YELDYI--------------------VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+G+ ++ Y G AL + R+ V W+
Sbjct: 72 LLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWN 131
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI K G A + M+ + + F + VLK C L S R G H
Sbjct: 132 LLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCN 191
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER---DVVSWTGIIVGCGQNGRAKEAI 508
GFE +L+ MY +CG +++ +F + +R DV+SW I+ ++ A A+
Sbjct: 192 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 251
Query: 509 AYFQEM--IQSRLKPNE----ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
F +M I NE I+ + +L AC V + + + G P +
Sbjct: 252 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAI-RNGTFPDVFVG 310
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++D + G ++A ++ M FK D W +M+ N
Sbjct: 311 NALIDAYAKCGLMENAVKVFNMMEFK-DVVSWNAMVAGYSQSGN 353
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 322/660 (48%), Gaps = 88/660 (13%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
L ++ N ++ + + DA +LF M R++ ++ M+ Y++N R A L+
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR-LIHERITREKLEYDTVLMNTLLDMYVK 152
+ P+ + Y+ +L A ++S L R L E R D+V N ++ +
Sbjct: 94 AI-----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR-----DSVTYNVMISSHAN 143
Query: 153 CG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLT 205
G SL R FD + + WN ML+ + RG E + ++
Sbjct: 144 HGLVSLARHYFD------LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFECS----CFT 249
+L+ Y++ G++ + LF+ MP RDVVSW ++ G F+ + FT
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+A+V Y+ +L EAR++FD A N WN+M++ Y+ +EA L +
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFD------AMPERNAVSWNAMVAAYIQRRMMDEAKELFN- 310
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ C N+ ++N+ ++ YA+
Sbjct: 311 ----------------MMPCRNVASWNT------------------------MLTGYAQA 330
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G ++ A +F +P+KD V+W+ ++ ++ G + LF +M + VN+ + VL
Sbjct: 331 GMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVL 390
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ +A+L G Q+H ++ G+ +L+ MY KCG ++D F+ M ERDVV
Sbjct: 391 STCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVV 450
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G ++G KEA+ F M + KP++IT +GVL+AC H+GLVE+ + F SM
Sbjct: 451 SWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSM 510
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G+ EHY CM+DLLG+AG +A L+ +MPF+PD T+W ++L A H N +L
Sbjct: 511 HHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPEL 570
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
AE++ PE+ YV+LSN+YA+ G W K+R ++ G KK G SWIEV +
Sbjct: 571 GRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQN 630
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++ G LH R+I+ G F GN LL+MY ++ DA F+EM +++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSW TM+ Y + A+ +++ M+ S +P+ VL ACS SG ++ G
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFD-MMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 196/665 (29%), Positives = 331/665 (49%), Gaps = 48/665 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C + G +H RIIK G D F +LL +Y + L DA K+FD++ +++
Sbjct: 106 LRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDL 165
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW++++++Y N A+ ++ +L V+ + + +V +ACS G L L + IH
Sbjct: 166 VSWSSIISSYVDKGEANEALEMF-RLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHG 224
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I R +++ L N+L++MY C L ++F +N W SM+
Sbjct: 225 YIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMAN------KTFISWTSMI----- 273
Query: 188 VHAFCVKR-GFEKEDVTLTSLIDMYLKCGEID---DGLALFNFMPERDVVSW--TGIIVG 241
+C R G+ KE ++++K E+ + + + + +SW G ++
Sbjct: 274 ---YCYNRSGWFKEA------FEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIH 324
Query: 242 C--------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
C F+ C L+++Y+ C L K+ A NV WN+++S
Sbjct: 325 CYALKKGMTFQDDCLG-PVLIELYAGCGKLGYCEKVL------LAIGERNVVSWNTLLSI 377
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
EEA+ L + G+ +D ++ +SA+ AC N+ + + Q+HG +
Sbjct: 378 NARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSL--QLGRQIHGYAIKRCI- 434
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
L V + LI +Y+R G SA +F+ + +K VAW+ +I G + G + A L M
Sbjct: 435 LGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQM 494
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + + S ++ C+ + L +GK +H + G EK+ T+L DMY KCG++
Sbjct: 495 YLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDL 554
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F M E+ VVSW+ +I G G +GR AI +F +M++ +KPN ITF+ +LSAC
Sbjct: 555 RTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSAC 614
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+G VE+ F M+ ++G+EP EH+ C+VDLL +AG + A ++I MPF D ++
Sbjct: 615 SHSGSVEQGKFYFDLMR-DFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASV 673
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
++L C H ++ I + LL D Y +LSN+YA +G W + R ++
Sbjct: 674 LGNLLNGCRIHQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMER 733
Query: 654 LGEKK 658
G KK
Sbjct: 734 SGYKK 738
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ ++C L N Q+H + + + LI+ YA++G++KS+ +F
Sbjct: 4 YMPLFRSCKTLRQLN-----QLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFET 58
Query: 382 LPKKDVVAWSGLIMGCT--KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
D W G+++ C H A LL+ M+ + + F+ SVL+ C+ +
Sbjct: 59 YQNPDSFMW-GVLIKCHVWSHAFEE-AILLYDKMLCNEAQITSFVFPSVLRACAGFGDMF 116
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G +VH +K GF+ + TSL+ +Y + G + D +F +P RD+VSW+ II
Sbjct: 117 IGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYV 176
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
G A EA+ F+ ++ R+K + + L V AC G+++ A +I
Sbjct: 177 DKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSI 222
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ A++ C +++GK LH ++I YG+ +D++ L MYA L A +F M+
Sbjct: 507 LSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSE 566
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K++VSW+ M++ Y + R + AI +N M+E G ++PN + +L ACS SG ++ G+
Sbjct: 567 KSVVSWSAMISGYGMHGRIDAAITFFNQMVELG-IKPNHITFMNILSACSHSGSVEQGKF 625
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + +E + L+D+ + G +
Sbjct: 626 YFDLMRDFGVEPSSEHFACLVDLLSRAGDV 655
>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
Length = 740
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 203/704 (28%), Positives = 330/704 (46%), Gaps = 88/704 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+++ N L+ L +A ++FD M +++VSW M++ A+ +Y M
Sbjct: 36 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 95
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ G + P+ F ++VL ACS D G H + L+ + + N LL MY KCG
Sbjct: 96 VCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 154
Query: 156 LTR---KLFDQYSNWAASAY----GNVALWNSMLSG------------------------ 184
+ ++F+ S +Y G +A N +L
Sbjct: 155 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214
Query: 185 -------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
GKQ+H ++ GF + SL+++Y K +++ +F
Sbjct: 215 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 274
Query: 226 FMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCE 265
MPE +VVSW +IVG F+ + T +++ +
Sbjct: 275 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 334
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R++F + SA WN+M+SGY E EEAI+ + + D T +
Sbjct: 335 GRRIFSSIPQPSVSA------WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 388
Query: 326 LKACINLLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR- 381
L +C L RF Q+HG+++ + + + S LI +Y+ ++ + +F
Sbjct: 389 LSSCARL-----RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 443
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRR 440
+ + D+ W+ +I G + L++ A +LFR M + N+ ++VL CS L SL
Sbjct: 444 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 503
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q H VK G+ + T+L DMY KCGEID F + ++ V W +I G G
Sbjct: 504 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 563
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NGR EA+ +++MI S KP+ ITF+ VL+AC H+GLVE I +SM+ +G+EP L+
Sbjct: 564 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 623
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY C+VD LG+AG +DAE+L P+K +W +L +C H + L +AE+L+
Sbjct: 624 HYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 683
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSW 663
P+ + YV+LSN Y++L WD + ++ K K G SW
Sbjct: 684 DPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 727
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 198/419 (47%), Gaps = 41/419 (9%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + + L+D+Y++CG+ D +F+ M RDV SW + F C L
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT--FRCKVGDLG---- 55
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
EA ++FD +V WN+MIS V E+A+ + + G
Sbjct: 56 ---------EACEVFDGMPER------DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF 100
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKS 374
+T S L AC +L + F ++ HG+ V +G + + VG+ L+ +YA+ G V
Sbjct: 101 LPSRFTLASVLSACSKVL--DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDY 158
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV--- 431
+ +F L + + V+++ +I G + A +FR M V+ +S++L +
Sbjct: 159 GVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAP 218
Query: 432 ---CSCLASL---RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
C L+ + GKQ+H ++ GF + SL+++Y K +++ +F MPE
Sbjct: 219 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 278
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+VVSW +IVG GQ R+ +++ + M S +PNE+T + VL AC +G VE I
Sbjct: 279 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 338
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF---KPDKTIWASMLKAC 601
F+S+ +P + + M+ +++A +M F KPDKT + +L +C
Sbjct: 339 FSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 392
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 184/459 (40%), Gaps = 93/459 (20%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK +HC ++ G D+ N+LL +YA +N A +F EM N+VSW M+ +
Sbjct: 234 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 293
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
R + ++ M + G +PN +VL AC SGD++ GR I I + +
Sbjct: 294 EYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNA 352
Query: 142 LMN--TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS-----MLSGGKQVHAFCVK 194
+++ + + Y + S R++ Q+ N + +S L GGKQ+H ++
Sbjct: 353 MLSGYSNYEHYEEAISNFRQM--QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 410
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALF-NFMPERDVVSWTGIIVGCFECSCFTLSAL 253
K ++ LI +Y +C +++ +F + + E D+ W +I G F + AL
Sbjct: 411 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG-FRHNMLDTKAL 469
Query: 254 V-------------------DMYSNCNVLC------------------------------ 264
+ + S+C+ LC
Sbjct: 470 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 529
Query: 265 --------EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
AR+ FD A N +WN MI GY N + +EA+ L + SSG
Sbjct: 530 YCKCGEIDSARQFFD------AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK 583
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--------ELDYIVGSNLIDLYAR 368
D TF S L AC S L GL + S ELD+ + ++D R
Sbjct: 584 PDGITFVSVLTAC-------SHSGLVETGLEILSSMQRIHGIEPELDHYIC--IVDCLGR 634
Query: 369 LGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
G ++ A +L P K V W L+ C HG SLA
Sbjct: 635 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 673
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 18/230 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-N 68
L C + R ++ GK +H +I+ +S++ + L+++Y++ + + +FD+ + +
Sbjct: 389 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 448
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
I W +M++ + N A+ L+ M + + PN ++ VL +CS L GR H
Sbjct: 449 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 508
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + D+ + L DMY KCG + R+ FD A N +WN M+ G
Sbjct: 509 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD------AVLRKNTVIWNEMIHGYG 562
Query: 185 --GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G+ A + R G + + +T S++ G ++ GL + + M
Sbjct: 563 HNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 612
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 360/694 (51%), Gaps = 66/694 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-------------DFTSLND 56
L+ C R++ GK++H ++ ++ N+LL+MY+ ++ +
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 162
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
K+FD M ++ +V+W T++ Y +R A++ ++ M++ G ++P+ + V A S
Sbjct: 163 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG-IKPSPVSFVNVFPAFS 221
Query: 117 LSGDLDLGRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
GD ++H + + EY D ++++ + MY + G L +K+FD
Sbjct: 222 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN------CLE 275
Query: 173 GNVALWNSMLSGGKQVHAFCVK------RGFEKED-----VTLTSLIDM--YLKCGEIDD 219
N +WN+M+S Q + F ++ + E ED VTL S I +L+ E+ +
Sbjct: 276 RNTEVWNTMISAFVQ-NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAE 334
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
L F V+ + C ++AL+ MYS CN + + K+FD
Sbjct: 335 QLHAF-------VIKNVAVTQVC------VMNALIAMYSRCNSIDTSFKIFDNMPE---- 377
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V WN+MIS +V N N+EA+ L + + +DS T T+ L A +L N +
Sbjct: 378 --KDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPD--I 433
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGC 397
Q HG ++ +G + + + S LID+YA+ G +++A +F + ++D W+ ++ G
Sbjct: 434 GKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGY 492
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
T++GL A+L+ R M++ N ++S+L C+ + GKQ+H F ++ ++
Sbjct: 493 TQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNV 552
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
T+LIDMY K G I +F E+ +V+++ +I+G GQ+G + A+ F M +S
Sbjct: 553 FVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKS 612
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P+ +T + VLSAC +AGLV+E IF SM+ Y ++P EH+ C+ D+LG+AG D
Sbjct: 613 GIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDK 672
Query: 578 AEQLIAEMPFKPD-KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK--YVMLSNV 634
A + + + K + IW S+L AC H +L ++A++LL + +V+LSN+
Sbjct: 673 AYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNI 732
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
YA W+++ VRK ++ G +K+ G SWIE++
Sbjct: 733 YAEERNWENVDIVRKQMRERGLKKETGSSWIEIA 766
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 244/510 (47%), Gaps = 42/510 (8%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVL 112
L+ A +LFD + R + V W T++ N P+ A+ Y++M V+ + + YS+VL
Sbjct: 44 LHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVL 103
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS---------------LT 157
KAC+ + +L +G+ +H R + ++ N+LL+MY C S L
Sbjct: 104 KACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLV 163
Query: 158 RKLFDQYSNWAASAYGNVALW---NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
RK+FD A+ + W + + + +K G + V+ ++ +
Sbjct: 164 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 223
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
G+ + +VV + +G + + +S+ + MY+ L A+K+FD
Sbjct: 224 GDFKNA----------NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN- 272
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSALKACINL 332
N +WN+MIS +V N + E I L + S ID T SA+ A +L
Sbjct: 273 -----CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHL 327
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
F A Q+H ++ + V + LI +Y+R ++ ++ ++F +P+KDVV+W+
Sbjct: 328 QKF--ELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNT 385
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++GLN A +LF +M + V+ ++++L S L + GKQ H + ++ G
Sbjct: 386 MISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG 445
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ E + + LIDMY K G I+ +F+ F ERD +W ++ G QNG +A
Sbjct: 446 IQFEGMD-SYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 504
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
++M+ ++ PN +T +L AC +G ++
Sbjct: 505 LRQMLDQKVMPNVVTLASILPACNPSGYID 534
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 49/433 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ A+ + + + LH +IK + N L++MY+ S++ + K+
Sbjct: 312 IDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKI 371
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M K++VSW TM++A+ N + A+ L+ M + + + +A+L A S +
Sbjct: 372 FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM-KKQDLMVDSVTVTALLSAASDLRN 430
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
D+G+ H + R ++++ + + L+DMY K G + + +F++ + S + A W
Sbjct: 431 PDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEK----SFSHERDQATW 485
Query: 179 NSMLSGGKQV----HAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFMPE 229
NSM+SG Q AF + R + VTL S++ G ID G L F
Sbjct: 486 NSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIR 545
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
D+ + + F +AL+DMYS + A +F + + ++ +++
Sbjct: 546 NDL-----------DQNVFVATALIDMYSKSGSIAHAENVFSKANE------KSIVTYST 588
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI GY + E A+ + + SG+ D+ T + L AC S L GL +
Sbjct: 589 MILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC-------SYAGLVDEGLQIF 641
Query: 350 SGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVA--WSGLIMGCTKHG 401
Y + + + D+ R G V A E L +K V W L+ C H
Sbjct: 642 ESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHK 701
Query: 402 LNSLAYLLFRDMI 414
L L+ + ++
Sbjct: 702 QFELGKLVAKKLL 714
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 326/637 (51%), Gaps = 37/637 (5%)
Query: 41 GNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
GN +LSM F A K+F +M +++ SW MV Y A+ LY+ ML +
Sbjct: 132 GNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRML-WAG 190
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
P+ + + VL++C DL +GR +H + R L + ++N L+ MY KCG + R
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFE--------KEDVTLTSLIDM 210
K+FD S + WN+M++G + H + G E + + L ++ +
Sbjct: 251 KVFDGMS------LTDCISWNAMIAGHFENHE--CEAGLELFLHMLEDEVEPNLMTITSV 302
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ G + D +F E ++ + F ++L+ MYS+ + EA +F
Sbjct: 303 TVASGLLSD----LDFAKEIHALA----VKRGFATDVAFCNSLIQMYSSLGRMGEACTVF 354
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ + A + W +MISGY N ++A+ + + + + + D T SAL AC
Sbjct: 355 SRMETRDAMS------WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACA 408
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+L + +++H L + G+ +V + L+++YA+ ++ A+E+F +P KDV++W
Sbjct: 409 SLGRLD--VGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISW 466
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
S +I G + N A FR M+ ++ N + L C+ SLR GK++HA ++
Sbjct: 467 SSMIAGFCFNHKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLR 525
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+G E +L+D+Y+KCG+ A F +DVVSW ++ G +G A+++
Sbjct: 526 QGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSF 585
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F EM+++ P+E+TF+ +L C AG+V + W +F SM +Y + P+L+HY CMVDLL
Sbjct: 586 FNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLS 645
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+ G + I MP PD +W ++L C H N +L + A+ +L P D +V+
Sbjct: 646 RVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVL 705
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
LS++YA GMW +SKVRK + G E G SW+EV
Sbjct: 706 LSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEV 742
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 190/492 (38%), Gaps = 115/492 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG + G+ +H ++++GL ++ N L++MYA + A K+FD M+ +
Sbjct: 202 LRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDC 261
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW M+ + N + L+ HMLE VEPN ++V A L DLD + IH
Sbjct: 262 ISWNAMIAGHFENHECEAGLELFLHMLE-DEVEPNLMTITSVTVASGLLSDLDFAKEIHA 320
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ D N+L+ MY G + +F + A + W +M+SG
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMS------WTAMISGYEK 374
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G ++H +GF + V
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVV 434
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-C-----FECSCFTLSALVDMY 257
+L++MY K I+ + +F +MP++DV+SW+ +I G C FE + L D+
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVK 494
Query: 258 SN------------------------CNVLCEA--------RKLFDQYS-------SWA- 277
N +VL + L D Y +WA
Sbjct: 495 PNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQ 554
Query: 278 --ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
A +V WN M++G+V + + A++ + + +G D TF + L C
Sbjct: 555 FGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGC------ 608
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVV 388
SR + G + Y + NL +DL +R+G + +R+P D
Sbjct: 609 -SRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAA 667
Query: 389 AWSGLIMGCTKH 400
W L+ GC H
Sbjct: 668 VWGALLNGCRIH 679
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 89/175 (50%)
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ ++ + R G A ++F ++P++DV +W+ ++ G K G A L+ M+ +
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + VL+ C + L G++VHA ++ G E L +L+ MY KCG+++
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+F M D +SW +I G +N + + F M++ ++PN +T V A
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA 305
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 306/570 (53%), Gaps = 35/570 (6%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYS-- 165
++L+ C+ G D G +H + + + + N L+DMY KC + K+FD
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 166 ---NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+W+A G+V N L G + + ++G + T ++ + ++ GL
Sbjct: 71 NVVSWSALMSGHV--LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ F + +G FE ++LVDMYS C + EA K+F + + +
Sbjct: 129 IHGFC----------LKIG-FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS-- 175
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC--IDSYTFTSALKACINLLNFNSRFA 340
WN+MI+G+V +A+ + + + D +T TS LKAC + +
Sbjct: 176 ----WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA--G 229
Query: 341 LQVHGLIVTSGYELD---YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
Q+HG +V SG+ I GS L+DLY + G + SA + F ++ +K +++WS LI+G
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ G A LF+ + N ++ F +SS++ V + A LR+GKQ+ A VK E
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
L S++DMYLKCG +D+ F M +DV+SWT +I G G++G K+++ F EM++
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P+E+ +L VLSAC H+G+++E +F+ + +G++P +EHY C+VDLLG+AG +
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A+ LI MP KP+ IW ++L C H + +L + + LL ++P+ YVM+SN+Y
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ R+ G G +K+AGMSW+E+
Sbjct: 529 AGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 235/545 (43%), Gaps = 101/545 (18%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ +V LR C ++ QG +HC ++K G ++ T N L+ MY A+K+FD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M +N+VSW+ +++ + N ++ L++ M G + PN F +S LKAC L L+
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEK 125
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLFDQ--------YSNWAA 169
G IH + E + N+L+DMY KCG + R++ D+ + +
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 170 SAYGNVAL----------------------------WNSMLSGGKQVHAFCVKRGFE-KE 200
+ YG+ AL M+ GKQ+H F V+ GF
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 201 DVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
T+T SL+D+Y+KCG + F+ + E+ ++SW+ +I+G Y+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG---------------YAQ 290
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
EA LF + L E N + IDS
Sbjct: 291 EGEFVEAMGLFKR-----------------------LQELNSQ--------------IDS 313
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+ +S + + +Q + + SG E + ++++D+Y + G V A + F
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCF 371
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ KDV++W+ +I G KHGL + +F +M+ N + ++ +VL CS ++
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 440 RGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVG 497
G+++ + ++ G + ++D+ + G + + L MP + +V W ++
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 498 CGQNG 502
C +G
Sbjct: 492 CRVHG 496
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 215/724 (29%), Positives = 351/724 (48%), Gaps = 118/724 (16%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFT-------------- 52
V L++ + I+ G +LH + K G+S + + LL MY ++
Sbjct: 25 VSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDG 84
Query: 53 -----------------SLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+L++A KLFDEM + N +SWT +++ + R ++ +
Sbjct: 85 FDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYF--- 141
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
E N F + V ++SG + G + E ++ L LL+ VK
Sbjct: 142 ------ERNPFQ-NVVSWTAAISGYVQNG------FSVEAMK----LFIKLLESEVKPNK 184
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+T F A + G+ L G V VK G+E + SLI + L+ G
Sbjct: 185 VT---FTSVVR-ACANLGDFGL-------GMSVLGLIVKTGYEHDLAVSNSLITLCLRMG 233
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
EI +F+ M E+DVVSWT A++D+Y + L EAR++FD+
Sbjct: 234 EIHLAREVFDRMEEKDVVSWT---------------AILDLYVEMDELGEARRIFDEMPQ 278
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
N W++MI+ Y + EE++ L + G + F+S L A ++
Sbjct: 279 R------NEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEAL 332
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+ + +HG + G+E D V S+LID+Y + G K LF + +K++V+W+ ++
Sbjct: 333 QA--GMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVG 390
Query: 396 GCTKHG-LNSLAYL------------------------------LFRDMINSNQDVNQFI 424
G + +G + YL +F +MI + N+
Sbjct: 391 GYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKST 450
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
SS+L C+ ASL +GK +H VK G + + T+L DMY K G+I+ +F MP
Sbjct: 451 FSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP 510
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAW 543
+++ VSWT +I G ++G A+E++ F+EM + S + PNE+ FL VL AC H+GLV++
Sbjct: 511 KKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGL 570
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F SM+ YGL+P H+ C+VD+L +AG +AE+ I MPF+P+ WA++L C+T
Sbjct: 571 WYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKT 630
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMS 662
+ N +L +A +L + ++ + YV+LSN+YA+ G W + KVRK K G KK+ G S
Sbjct: 631 YKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCS 690
Query: 663 WIEV 666
W+E+
Sbjct: 691 WVEI 694
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 205/761 (26%), Positives = 351/761 (46%), Gaps = 106/761 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L +V A G+ I G ++H + GL +++ G LL +Y ++DA +LF
Sbjct: 44 LASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFW 103
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDL 121
EM +N+VSWT ++ A +SN +R Y M G V N ++ V+ C SL ++
Sbjct: 104 EMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREG-VPCNANAFATVVSLCGSLENEV 162
Query: 122 -----------------------------DLGRLIH-ERITREKLEYDTVLMNTLLDMYV 151
+LGR+ E++ E+DT+ N ++ MY
Sbjct: 163 PGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYS 222
Query: 152 KCGSLTRKLFDQYSNWAASAYG----------NVALWNSMLSGGKQVHAFCVKRGFEKED 201
G + K F +S+ +V S G +H+ C++ +
Sbjct: 223 HQG-ICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSV 281
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE----------------- 244
+ +L++MY G++ D LF M RD++SW +I +
Sbjct: 282 TVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHT 341
Query: 245 -------------CSCFTLSALVD-------------------------MYSNCNVLCEA 266
+C + AL+D MY CN + +A
Sbjct: 342 NEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA 401
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
K+F + +V +N +I GY + E +A+ + S I S+G+ + T + +
Sbjct: 402 EKVFQSMPTH------DVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMIN-I 454
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
N + +H I+ +G+ D V ++LI +YA+ GN++S+ +F+ + K+
Sbjct: 455 HGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKN 514
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ +I + G A LF DM ++ +++ ++ L C+ LASL G Q+H
Sbjct: 515 IVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG 574
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+K G + + + + +DMY KCG++++ L + R W +I G + G KE
Sbjct: 575 LGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKE 634
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A F++M+ KP+ +TF+ +LSAC HAGLV++ + SM +G+ P ++H C+V
Sbjct: 635 AEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 694
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+ G F +AE+ I EMP P+ IW S+L + TH N ++ A++LL P D S
Sbjct: 695 DLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDS 754
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+YAT W + K+R K + K+ SW+++
Sbjct: 755 AYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKL 795
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 3/315 (0%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHG 345
W + +SG V ++ A LL + G+ + + S + AC + +H
Sbjct: 9 WYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHA 68
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L +G + +G+ L+ LY G V A LF +P+++VV+W+ L++ + +G
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEE 128
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
+R M N ++V+ +C L + G QV + + G + + SLI
Sbjct: 129 TLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLIT 188
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
M+ G + D LF M E D +S +I G + F +M L+P+ T
Sbjct: 189 MFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATT 248
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++S C A I S+ L+ + +V++ AG DAE L M
Sbjct: 249 LCSLMSVCASADHFSHGSGIH-SLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 586 PFKPDKTIWASMLKA 600
+ D W +M+ +
Sbjct: 308 S-RRDLISWNTMISS 321
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/675 (28%), Positives = 335/675 (49%), Gaps = 41/675 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+L ++ L C + G S+H +IK+GL++ I + L+SMY+ L+ A LF
Sbjct: 341 NLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLF 400
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D KN + W ++++ Y N N A+ + M + +V P+ V+ C DL
Sbjct: 401 DSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKM-QIENVAPDATTVIKVIYGCRHIKDL 459
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
+ + IH R + E + +MN LL MY CG L+ KLF + + WN
Sbjct: 460 RMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKME------VRMLISWN 513
Query: 180 SMLSGGKQVHAFCV---------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+++SG ++ + G + + VTL LI + G +L +
Sbjct: 514 TIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSL---- 569
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ GC T + L+ MYSNC + ++LFD SS N +N +
Sbjct: 570 ------AVKSGCNMDISLT-NTLITMYSNCGSVEACQRLFDNLSSR------NTVSYNVL 616
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++GY N +EE + L + + + T + L C N S VH + +
Sbjct: 617 MTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNHQQGKS-----VHCYAIRN 671
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
L+ ++ I +Y+R NV + +LF+ + +++++ W+ ++ C + L A+ F
Sbjct: 672 FSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFF 731
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R M N ++ + S++ C+ L + G+ V A +++GF + + +LIDM+ +C
Sbjct: 732 RQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRC 791
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G + LF +D V+W+ +I +G + A+A F MI S +KP++ITF+ +L
Sbjct: 792 GSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIIL 851
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC H+G VE+A +F S++ ++G+ P +EHY CMVDLLG++G D+A ++ M F+P
Sbjct: 852 SACSHSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPS 911
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+++ S+L AC H N+K+ + L+ + +P YVMLSN+YA++G W+ +R
Sbjct: 912 ESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVD 971
Query: 651 GKKLG-EKKAGMSWI 664
+ G K AG+S +
Sbjct: 972 MEAKGLRKDAGVSLV 986
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 160/714 (22%), Positives = 293/714 (41%), Gaps = 99/714 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + G+ +HCR+++ G ++ LL MYA + + +FD M +K++
Sbjct: 147 IKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDL 206
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW M++ Y+ N A+ M + G + N + AC +GD D G +H
Sbjct: 207 ISWNAMISGYSLNGSLREAVEATQEMQQDG-MRANASTLVCIAGACGAAGDSDAGGSLHA 265
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------QYSNW-- 167
+ + D L L+ +Y L +R LFD Q+ W
Sbjct: 266 FALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKE 325
Query: 168 ---------AASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLID 209
A N+ S+L G VH +K G ++ +++L+
Sbjct: 326 SFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVS 385
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-----------CSCFTLSALVDMYS 258
MY K GE+D LF+ E++ + W II G C + D +
Sbjct: 386 MYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATT 445
Query: 259 NCNVLCEARKLFDQYSSWAASAYG-------NVALWNSMI-------------------- 291
V+ R + D + + AY N ++ N+++
Sbjct: 446 VIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKME 505
Query: 292 -----------SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
SGY E ++ L + G+ D T L + I++ ++
Sbjct: 506 VRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLI-GLISSISVAE-DTTVG 563
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+H L V SG +D + + LI +Y+ G+V++ LF L ++ V+++ L+ G K+
Sbjct: 564 ESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKN 623
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
L+ LFR M+ + Q+ N + ++L VC + ++GK VH + ++ E
Sbjct: 624 NLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQ---NHQQGKSVHCYAIRNFSTLETSFF 680
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
TS I MY + +D LF + ER+++ W I+ C Q A A +F++M +K
Sbjct: 681 TSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMK 740
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+E+T + ++SAC G + + T++ + G L ++D+ + G A +
Sbjct: 741 PDEVTMMSLVSACAQLGNSDLGECV-TALILQKGFGGTLLVVNALIDMHSRCGSLSFARE 799
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL--ATSPEDPSKYVMLS 632
L K D W++M+ + H + + I ++ P+D + ++LS
Sbjct: 800 LFDSSVVK-DSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILS 852
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 234/533 (43%), Gaps = 48/533 (9%)
Query: 17 RSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK--NIVSWT 73
RS+K LH + G +++D ++ Y F A +F R+ + S
Sbjct: 52 RSLKCLSKLHALLAVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLN 111
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
V ++ + + LY + +GS + F + V+KAC+ L LGR +H R+ R
Sbjct: 112 LAVRCFSDHGFHRELLDLYRTLCTFGS---DNFTFPPVIKACAAVSCLPLGREMHCRVLR 168
Query: 134 EKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQ 187
E + + LLDMY K G +R +FD ++ WN+M+SG G
Sbjct: 169 TGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQ------KDLISWNAMISGYSLNGSL 222
Query: 188 VHAFCVKRGFEKEDV--TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
A + +++ + ++L+ + CG D S G + F
Sbjct: 223 REAVEATQEMQQDGMRANASTLVCIAGACGAAGD--------------SDAGGSLHAFAL 268
Query: 246 SCFTL------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
C L AL+ +Y+ + L +R LFD ++ +NSMIS Y+ + +
Sbjct: 269 KCGVLGDESLAPALISLYAALDDLSSSRVLFD------LQHVKDLVSYNSMISAYMQHGK 322
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+E+ + +H +G+ + T S L C + N VHG+++ G V
Sbjct: 323 WKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVN--LGDSVHGMVIKFGLAEQISVV 380
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S L+ +Y++LG + SA LF +K+ + W+ +I G + ++A F M N
Sbjct: 381 SALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVA 440
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ + V+ C + LR K +HA+ V+ FE + +L+ MY CGE+ L
Sbjct: 441 PDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKL 500
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
F+ M R ++SW II G + + ++ F +M Q L+ + +T +G++S+
Sbjct: 501 FQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISS 553
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 141/308 (45%), Gaps = 6/308 (1%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D++TF +KAC + ++H ++ +G+E + V + L+D+YA+ G + ++
Sbjct: 139 DNFTFPPVIKACAAVSCL--PLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRT 196
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F + +KD+++W+ +I G + +G A ++M N + + C
Sbjct: 197 VFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGD 256
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
G +HAF +K G ++ +LI +Y ++ LF +D+VS+ +I
Sbjct: 257 SDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISA 316
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q+G+ KE+ F++M + L PN +T + VL C V ++ M ++GL
Sbjct: 317 YMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVH-GMVIKFGLAE 375
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKLVSIIAE 615
+ +V + + G D A+ L K + +W S++ +N N L +
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHLFDSCTEK-NNLLWNSIISGYLVNNEWNMALDTFCKM 434
Query: 616 QLLATSPE 623
Q+ +P+
Sbjct: 435 QIENVAPD 442
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 300/572 (52%), Gaps = 34/572 (5%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYS 165
++++LK C+ GDL GR +H ++ ++ + + L +MY KC + R++FD+
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ WN++++G + G + + + ++ M + GE D + L +
Sbjct: 122 ------VRDRVAWNALVAG-------YARNGLAR--MAMEMVVRMQEEEGERPDSITLVS 166
Query: 226 FMPERDVV--------SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+P + I E +A++D Y C + AR +FD W
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD----WM 222
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ N WN+MI GY N + EA+ L + + G+ + + +AL+AC L +
Sbjct: 223 PTK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
++VH L+V G + + V + LI +Y++ V A +F L ++ V+W+ +I+GC
Sbjct: 281 --GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++G + A LF M N + F + SV+ + ++ + + +H + ++ +++
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
LT+LIDMY KCG ++ LF ER V++W +I G G +G K A+ F+EM
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ PNE TFL VLSAC HAGLV+E FTSMK +YGLEP +EHY MVDLLG+AG D+
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A I +MP P +++ +ML AC+ H N +L A+++ P++ +V+L+N+YA
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
MW +++VR A +K G +K G S I++ +
Sbjct: 579 ASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 186/498 (37%), Gaps = 114/498 (22%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR L+ C R + G+++H ++ G+ + L +MYA DA ++FD
Sbjct: 59 LRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFD 118
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M ++ V+W +V Y N A+ + M E P+ +VL AC+ + L
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAASAYG-- 173
R H R LE + +LD Y KCG + R +FD +W A G
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238
Query: 174 -------NVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDV 202
+AL+N M L G +VH V+ G +
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC--------------- 247
+ +LI MY KC +D +F+ + R VSW +I+GC + C
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 248 -----FTL-----------------------------------SALVDMYSNCNVLCEAR 267
FTL +AL+DMY+ C + AR
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
LF+ ++ +V WN+MI GY + + A+ L + S G+ + TF S L
Sbjct: 419 ILFN------SARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLS 472
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGS------NLIDLYARLGNVKSALELFHR 381
AC S L G + + DY + ++DL R G + A +
Sbjct: 473 AC-------SHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQK 525
Query: 382 LPKKDVVAWSGLIMGCTK 399
+P ++ G ++G K
Sbjct: 526 MPMDPGLSVYGAMLGACK 543
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 205/625 (32%), Positives = 298/625 (47%), Gaps = 90/625 (14%)
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASA 171
A +LSG R H RI + + +T L+NTL+ Y + G L R++FD+
Sbjct: 30 APNLSG----ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIP------ 79
Query: 172 YGNVALWNSMLSG----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC---GEIDDGLALF 224
N +N++LS G+ A + D + + L G D L
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFL 139
Query: 225 NFMPERDVV----SWTGIIVGC--------------------FECSCFTLSALVDMYSNC 260
M D V S+ + C SALVDMY+ C
Sbjct: 140 AAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKC 199
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+AR++FD A NV WNS+I+ Y N EA+ L + ++G D
Sbjct: 200 ERPEDARRVFD------AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEV 253
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLG--------- 370
T +S + AC L R QVH +V D +V +N L+D+YA+ G
Sbjct: 254 TLSSVMSACAGLAA--DREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 371 ----------------------NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
NV+ A +F ++ +K+V+AW+ LI ++G A
Sbjct: 312 DSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF------EKEDITLTS 462
LF + + + +VL C +A L+ G+Q H +K GF E + S
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNS 431
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+DMYLK G IDDG +F+ M RD VSW +IVG QNGRAK+A+ F+ M+ S P+
Sbjct: 432 LVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPD 491
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+T +GVLSAC H+GLV+E F SM ++G+ P +HY CMVDLLG+AG +AE+LI
Sbjct: 492 SVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELI 551
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
+MP +PD +WAS+L AC H N +L A +L P++ YV+LSN+YA +G W
Sbjct: 552 NDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWA 611
Query: 643 SLSKVRKAGKKLG-EKKAGMSWIEV 666
+ +VR++ K G K+ G SWIE+
Sbjct: 612 EVFRVRRSMKDRGVSKQPGCSWIEI 636
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/568 (24%), Positives = 241/568 (42%), Gaps = 116/568 (20%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ ++ H RI+K ++ + F N L+S YA L DA ++FDE+ +N S+ +++
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 78 AYTSNKRPNWAIRLYNHMLE-----YGSVEP---------------------------NG 105
AY RP+ A L+ + + Y +V N
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
+ +++ L AC+ D G +H + R D + + L+DMY KC R++FD
Sbjct: 152 YSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFD- 210
Query: 164 YSNWAASAYGNVALWNSMLS---------------------------------------- 183
A NV WNS+++
Sbjct: 211 -----AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGL 265
Query: 184 ----GGKQVHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G+QVHA VK ++D+ L +L+DMY KCG + +F+ MP R +VS T I
Sbjct: 266 AADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSI 325
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ G + SA V+ +A+ +F Q NV WN +I+ Y N
Sbjct: 326 LTG------YAKSANVE---------DAQVVFSQMVE------KNVIAWNVLIAAYAQNG 364
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY-- 356
+ EEAI L + + YT+ + L AC N+ + + Q H ++ G+ D+
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADL--QLGQQAHVHVLKEGFRFDFGP 422
Query: 357 ----IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
VG++L+D+Y + G++ ++F R+ +D V+W+ +I+G ++G A LF
Sbjct: 423 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFER 482
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M+ SN++ + + VL C + G++ H+ G T ++D+ + G
Sbjct: 483 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAG 542
Query: 472 EIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ + L MP E D V W ++ C
Sbjct: 543 HLKEAEELINDMPMEPDSVLWASLLGAC 570
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 178/474 (37%), Gaps = 139/474 (29%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + + G+ +H + + + D+ + L+ MYA DA ++FD M +N
Sbjct: 157 ALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERN 216
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGDLDLGRLI 127
+VSW +++T Y N A+ L+ M+ G P+ S+V+ AC+ L+ D + GR +
Sbjct: 217 VVSWNSLITCYEQNGPVGEALMLFVEMMAAG-FSPDEVTLSSVMSACAGLAADRE-GRQV 274
Query: 128 HERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASA- 171
H + + ++L D VL N L+DMY KCG R +FD + +A SA
Sbjct: 275 HAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSAN 334
Query: 172 ------------YGNVALWNSMLSGGKQ-------------------------------- 187
NV WN +++ Q
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 188 ------------VHAFCVKRGF------EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
H +K GF E + SL+DMYLK G IDDG +F M
Sbjct: 395 CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD VSW +IVG
Sbjct: 455 RDNVSWNAMIVG------------------------------------------------ 466
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLI 347
Y N + ++A+ L + S DS T L AC L++ R+ H +
Sbjct: 467 ----YAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRY---FHSMT 519
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G + ++DL R G++K A EL + +P + D V W+ L+ C H
Sbjct: 520 EDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH 573
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 46/303 (15%)
Query: 20 KQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
K G++ R I + S+ I + ++L+ YA ++ DA +F +M KN+++W ++ A
Sbjct: 300 KCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAA 359
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL-- 136
Y N AIRL+ L+ S+ P + Y VL AC DL LG+ H + +E
Sbjct: 360 YAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRF 418
Query: 137 ----EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
E D + N+L+DMY+K GS+ K+F++ +A NV+ WN+M+ G G+
Sbjct: 419 DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM-----AARDNVS-WNAMIVGYAQNGR 472
Query: 187 QVHAFCVKRGFEK-----EDVTLTSLIDMYLKCGE---IDDGLALFNFMPERDVVSWTGI 238
A + FE+ E+ ++I + CG +D+G F+ M E GI
Sbjct: 473 AKDALHL---FERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTED-----HGI 524
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+C +VD+ L EA +L + S LW S++ L++
Sbjct: 525 TPSRDHYTC-----MVDLLGRAGHLKEAEELINDMPMEPDS-----VLWASLLGACRLHK 574
Query: 299 QNE 301
E
Sbjct: 575 NVE 577
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/659 (29%), Positives = 316/659 (47%), Gaps = 50/659 (7%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H + I G D+ T L DF++ A LF + + +I + +V ++ N P
Sbjct: 32 HAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSP 91
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+ +I LY H+ ++ P+ F Y+ + ACS L L+H + + + +
Sbjct: 92 SSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSA 148
Query: 146 LLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVK 194
L+D+Y K + RK+FD + LWN+M++G Q+ V
Sbjct: 149 LVDLYCKFSRVVYARKVFDGMPER------DTVLWNTMINGLVKNCCFDDSIQLFREMVA 202
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G + T+T+++ + E+ G+ + + +G C + L+ L+
Sbjct: 203 DGVRVDSSTVTAVLPAAAELQELKVGMG----------IQCLALKIGFGFCD-YVLTGLI 251
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+YS C + AR LF + + AY N+MISG+ N E ++ L + SG
Sbjct: 252 SLYSKCGDVNTARLLFRRINRPDLIAY------NAMISGFTANGGTECSVKLFRELLFSG 305
Query: 315 MCIDSYTFTSALKACINLLNFNSRF-----ALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S T + L+ +S F A +HG V SG L+ V + +Y +L
Sbjct: 306 ERVSSSTI-------VGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKL 358
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+ A LF P+K VVAW+ +I G T++G A LF++M+ + N I+++L
Sbjct: 359 NEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTIL 418
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C+ L SL GK VH E T+L+DMY KCG I + LF M E++ V
Sbjct: 419 SACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTV 478
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+W +I G G +G EA+ + EM+ P+ +TFL VL AC HAGLV E IF +M
Sbjct: 479 TWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNM 538
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+Y +EP +EHY CMVD+LG++G + A + I +MP +P +W ++L AC H +T +
Sbjct: 539 VNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDI 598
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ +E+L P YV+LSN+Y+ + + +R+ KK K G + IEV+
Sbjct: 599 ARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVN 657
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 204/516 (39%), Gaps = 97/516 (18%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
LH I G ++F G+ L+ +Y F+ + A K+FD M ++ V W TM+ N
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCC 189
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
+ +I+L+ M+ G V + +AVL A + +L +G I + + ++
Sbjct: 190 FDDSIQLFREMVADG-VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT 248
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYG--------------NVALWNSMLSGGKQV 188
L+ +Y KCG + R LF + + AY +V L+ +L G++V
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308
Query: 189 ------------------------HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
H FCVK G T+ +Y K EID LF
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF 368
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+ PE+ VV+W +I G
Sbjct: 369 DESPEKTVVAWNAMISG------------------------------------------- 385
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
Y N E AI+L + + ++ T T+ L AC L + + F VH
Sbjct: 386 ---------YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLS--FGKWVH 434
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
LI + E + V + L+D+YA+ GN+ A +LF + +K+ V W+ +I G HG
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH 494
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSL 463
A L+ +M++ + + SVL CS + G+++ H K E +
Sbjct: 495 EALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACM 554
Query: 464 IDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+D+ + G+++ L K MP E W ++ C
Sbjct: 555 VDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGAC 590
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 167/460 (36%), Gaps = 117/460 (25%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L + + +K G + C +K G + L+S+Y+ +N A L
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F + R +++++ M++ +T+N +++L+ +L G + + ++ S G
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIV-GLIPLHSPFGH 325
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALW 178
L L IH + + + + +Y K L R LFD+ S V W
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDE------SPEKTVVAW 379
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+M+SG GK VH
Sbjct: 380 NAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKS 439
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
E T+L+DMY KCG I + LF+ M E++ V+W +I G
Sbjct: 440 ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG------------- 486
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVA--LWNSMIS-GYVLNEQNEEAITLLSHIH 311
+ YG+ A L+N M+ GY N A+T LS ++
Sbjct: 487 ---------------------YGLHGYGHEALKLYNEMLHLGY-----NPSAVTFLSVLY 520
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARL 369
+ C + + N++N Y ++ ++ + ++D+ R
Sbjct: 521 A---CSHAGLVGEGEEIFHNMVN----------------KYRIEPLIEHYACMVDILGRS 561
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYL 408
G ++ ALE ++P + W L+ C H +A L
Sbjct: 562 GQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARL 601
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 331 NLLNFNSRFA--LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+L+N S F Q H + +GY D + L + A LF +PK D+
Sbjct: 17 SLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIF 76
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
++ L+ G + + S + L+ + N+N + F + + CS L +HA
Sbjct: 77 LFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAH 133
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+ G+ ++L+D+Y K + +F MPERD V W +I G +N ++
Sbjct: 134 SIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDS 193
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSA 532
I F+EM+ ++ + T VL A
Sbjct: 194 IQLFREMVADGVRVDSSTVTAVLPA 218
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/744 (26%), Positives = 333/744 (44%), Gaps = 119/744 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG +R++ G+ +H I+ L+++ G + MYA + A LFD M +
Sbjct: 57 LRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRP 116
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
W ++ + + RP + LY M +E GFM++ V AC DL GR IH
Sbjct: 117 FCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV--ACGRIKDLAQGRSIH 174
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS--- 183
R+ + ++ + + L+ MY +CG L FD A WN+++S
Sbjct: 175 YRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELG------TAPWNAIMSALA 227
Query: 184 ---------------------------------------GGKQVHAFCVKRGFEKEDVTL 204
GG Q+H + L
Sbjct: 228 GAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERD---------VVSWTG------------------ 237
+LI MY++CG++D+ L +F MP R+ V+ TG
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGIN 347
Query: 238 -------------------------------IIVGCFECSCFTLSALVDMYSNCNVLCEA 266
I + ++L++MY+ +L EA
Sbjct: 348 PNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEA 407
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R++FD + + V + +MIS Y N +A+ + + + G+ + TF + L
Sbjct: 408 REVFDSILENSKT----VVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVL 463
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
AC+ + + S +H ++ SG + D ++L+D+YA+ G++ A +F + K
Sbjct: 464 AACVAIGDLAS--GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTK 521
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D+VAW+ +I + G N A L+ M+ S + +S++L C+ L L G+++H
Sbjct: 522 DLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIH 581
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
++ E++ +L MY KCG ++ L++ DV +WT ++ Q G A
Sbjct: 582 RQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLAS 641
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ + EM ++PNE+TF+ VL +C AGLV E F S+ +YG +P EH+ CM
Sbjct: 642 VALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCM 701
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD+LG+AG DAE+L+ MPF PD+ W S+L +C+ H + ++ + AE LL PE
Sbjct: 702 VDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPEST 761
Query: 626 SKYVMLSNVYATLGMWDSLSKVRK 649
S++V LS +YA G + ++++
Sbjct: 762 SQFVALSQIYAAAGRNSDIDEIKR 785
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 184/408 (45%), Gaps = 36/408 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V A+ H G+ + +G+ +H +I G+ D N+L++MYA L +A ++FD +
Sbjct: 356 VVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSIL 415
Query: 66 R--KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
K +VS+TTM++AY N P A+ ++ M G V PN ++ VL AC GDL
Sbjct: 416 ENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARG-VAPNEITFATVLAACVAIGDLAS 474
Query: 124 GRLIHERITREKLE-YDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNV 175
G IHER+ L+ D N+L+DMY KCG L ++F+ W NV
Sbjct: 475 GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANV 534
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
N+ ++ ++ G + TL++L+ + C + D LA+ + + + S
Sbjct: 535 QSGNN--RAALDLYDRMLQSGIHPDIATLSTLL---VACANLGD-LAMGEKIHRQALRSK 588
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
E +AL MY+ C L +A +L+ + +VA W SM++ +
Sbjct: 589 -------LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRG------SDVATWTSMLAAHS 635
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYE 353
A+ L + + S G+ + TF L +C L+ F H + G +
Sbjct: 636 QQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREF---FHSITSDYGSQ 692
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++D+ R G ++ A EL +P D +AW L+ C H
Sbjct: 693 PSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLH 740
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LL D + + +++L+ C +L G++VHA V R + + + MY
Sbjct: 36 LLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMY 95
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+C D +ALF MP+R W ++ R ++ + ++ M +P+ F+
Sbjct: 96 ARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFM 155
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG-------CFDDAEQ 580
+ AC + + +I + G+ ++ +V + Q G FDD +
Sbjct: 156 WAIVACGRIKDLAQGRSIHYRVATGRGINSSIQS--ALVTMYAQCGRIDLAMAAFDDNRE 213
Query: 581 L 581
L
Sbjct: 214 L 214
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/674 (28%), Positives = 333/674 (49%), Gaps = 45/674 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
L C R ++ + LH R+++ L D L+++ A S +D A K+FD MA+
Sbjct: 25 LDACASRANLAE---LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQ 81
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD---L 123
+ W M+ Y S P A+ L+ M G V P+ + +AV ++ +
Sbjct: 82 PTAIVWNCMIRGYNSCHAPMDALELFRAMRRSG-VSPDNYTMAAVAQSSAAFASWKGRAT 140
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWA--ASAYGN 174
G +H + R D +M+ L++ Y S+ RK+F++ +W SA+
Sbjct: 141 GDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQ 200
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
W+++L ++ + G + +T+ SL+ + +D GL ++ + E +
Sbjct: 201 CGQWDNVLRSLDEMQS----EGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGI-- 254
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
E +AL+ MY C + +A K F N WN++I G+
Sbjct: 255 ---------EADVDIRNALIGMYVKCGCMSDAWKTFK------GMPIRNTKSWNTLIDGF 299
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
V N +++EA+T+ + S G+ D T S L L + L H I
Sbjct: 300 VQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYL--HNYIKDHEIHC 357
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D I+ ++LI++YA+ G++ +A +F + ++D+V+W+ ++ G K A+ LF DM
Sbjct: 358 DIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMK 417
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ ++ + S+L CS L +L +G+++H++ ++ + ++L+DMY KCG ID
Sbjct: 418 VRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCID 477
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSAC 533
+F M + ++W +I G G+ KEA+A F+++++ R KP+ IT VL AC
Sbjct: 478 AAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCAC 537
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H G+V+E F M G+ P EHY C+VDLLG+AG D+A I +MP +P+ I
Sbjct: 538 THVGMVDEGLHYFNLML-TLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVI 596
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGK 652
W S+L AC H+ +L II + ++ +P D +V++SN++A G WD + +VR G
Sbjct: 597 WGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGS 656
Query: 653 KLGEKKAGMSWIEV 666
+ EK G S I+V
Sbjct: 657 RRVEKSPGHSSIQV 670
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 195/438 (44%), Gaps = 40/438 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I+ L CGQ R++ +G ++ R+ +YG+ D+ N L+ MY ++DA K F M
Sbjct: 226 IISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMP 285
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N SW T++ + N + A+ ++ ML G + P+ +VL + GDL GR
Sbjct: 286 IRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI-PDVITLVSVLSTYAQLGDLQQGR 344
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H I ++ D +L N+L++MY KCG + +F+ A ++ W +M+
Sbjct: 345 YLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENM------ARRDIVSWTAMVC 398
Query: 184 G---GKQVH-AFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G G Q AF + + DV L SL+ + G +D G + +++ E+ V
Sbjct: 399 GYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSV-- 456
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ SALVDMY+ C + A ++F + + WN+MI G
Sbjct: 457 ---------RTDMWLESALVDMYAKCGCIDAAAEIFSRMR------HKQTLAWNAMIGGL 501
Query: 295 VLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Q +EA+ L + D+ T L AC ++ + L L++T G
Sbjct: 502 ASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDE--GLHYFNLMLTLGIV 559
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D ++DL R G + A ++P + + V W L+ C H L ++ +
Sbjct: 560 PDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQH 619
Query: 413 MIN-SNQDVNQFIISSVL 429
+I+ + DV ++ S L
Sbjct: 620 IIDLAPNDVGAHVLISNL 637
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 142/321 (44%), Gaps = 35/321 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L Q ++QG+ LH I + + DI N+L++MYA + A +F
Sbjct: 323 DVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF 382
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ MAR++IVSWT MV Y + A L++ M + V + ++L ACS G L
Sbjct: 383 ENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDM-KVRDVMASEMALVSLLSACSQLGAL 441
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
D GR IH I + + D L + L+DMY KCG + ++F + + A WN
Sbjct: 442 DKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLA------WN 495
Query: 180 SMLSG------GKQVHAFCVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+M+ G GK+ A + R + + +TL ++ G +D+GL FN M
Sbjct: 496 AMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT 555
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
GI+ C +VD+ +L EA + N +W S
Sbjct: 556 ------LGIVPDNEHYGC-----IVDLLGRAGLLDEAYNFIQKM-----PIQPNPVIWGS 599
Query: 290 MISGYVLNEQNEEAITLLSHI 310
+++ ++ + E + HI
Sbjct: 600 LLAACRVHHRMELGKIIGQHI 620
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/632 (29%), Positives = 304/632 (48%), Gaps = 67/632 (10%)
Query: 39 FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
F N + A SL DA KLFD M R++ SW +++AY+ + P AI L++ M
Sbjct: 88 FLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSC 147
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT- 157
G V P ++VL C+ DL R +H I + + + +L L+D+Y KC +L+
Sbjct: 148 G-VRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSE 206
Query: 158 -RKLFDQYSN------------WAASAYGNVAL-------W------------------- 178
R+ FD + + G++A+ W
Sbjct: 207 ARRAFDGIPKPNDISWNVIIRRYLLAGMGDLAIDMFFRMVWAGVSPLVYTVSQALLACRD 266
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N L G+++H F ++ G+E+ +S++DMY KCG ID LF+ P +D+V T I
Sbjct: 267 NGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSI 326
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ G ++C + +A+++F+ N+ WN+M++GYV +
Sbjct: 327 VSG---------------LASCGRITDAKRVFEGMEEH------NLVSWNAMLTGYVRSM 365
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
A+ L + +D+ T L AC LL+ +VH SG+ +
Sbjct: 366 DLTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGK--GEEVHTFAFKSGFIGYPFL 423
Query: 359 GSNLIDLYARLGNVKSA--LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ L+ +Y++ G ++SA L LF ++D +W+ LI G +H ++ A L +M +
Sbjct: 424 KNALLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEM-HY 482
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
NQ SS L C+ + L GKQ+HA+ ++ G+ +DI ++LIDMY KC D
Sbjct: 483 EATPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYS 542
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+ +F+ P +DV+ W +I GC NG+ + + F EM + + P+ +TFLG L +C
Sbjct: 543 MRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISE 602
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G V + FT M EY + P +EHY CM++LLG+ G + E I MPF+P +W
Sbjct: 603 GHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDFIGHMPFEPTTAMWLR 662
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
+ C + N KL A+ + ++P P ++
Sbjct: 663 IFDCCREYGNRKLGERAAQCINDSNPLTPVRF 694
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 212/464 (45%), Gaps = 65/464 (14%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + + LH I K ++ G L+ +Y +L++A + FD + + N +SW
Sbjct: 163 CAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISW 222
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ Y + AI ++ M+ + V P + S L AC +G L+ GR IH +
Sbjct: 223 NVIIRRYLLAGMGDLAIDMFFRMV-WAGVSPLVYTVSQALLACRDNGALEEGRRIHTFVL 281
Query: 133 REKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
R E + ++++DMY KCG+ L ++LFD + ++ + S++SG G+
Sbjct: 282 RHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFD------LAPVKDIVMSTSIVSGLASCGR 335
Query: 187 QVHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
A V G E+ + V+ +++ Y++ ++ L LF M ++ + +GC
Sbjct: 336 ITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQM-RQETKELDAVTLGCVLN 394
Query: 246 SC-------------------------FTLSALVDMYSNCNVLCEARKLF--------DQ 272
+C F +AL+ MYS C L A +L D
Sbjct: 395 ACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDS 454
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
YS WNS+ISGY + +E A+ LS +H S TF+SAL AC N+
Sbjct: 455 YS------------WNSLISGYERHSMSEAALLALSEMHYEATPNQS-TFSSALAACANI 501
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
N Q+H ++ +GY +D I+ S LID+Y++ ++ +F P +DV+ W+
Sbjct: 502 FLLNH--GKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNS 559
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+I GC +G LF +M S Q + ++ + + SC++
Sbjct: 560 MIFGCAYNGKGEYGLELFFEM--SKQGITPDSVTFLGALVSCIS 601
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 219/507 (43%), Gaps = 74/507 (14%)
Query: 140 TVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHAFCV 193
T L N ++ CGSLT RKLFD + WN+++S G + A +
Sbjct: 87 TFLFNRAVESLAACGSLTDARKLFDAMPRRDGGS------WNAIISAYSRGEEPTEAISL 140
Query: 194 KR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
G +DVTL S++ +C ++ L + +RD S +I+G
Sbjct: 141 FSAMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQS--NVILG------- 191
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+ALVD+Y C L EAR+ FD N WN +I Y+L + AI +
Sbjct: 192 --TALVDVYGKCFALSEARRAFDGIPK------PNDISWNVIIRRYLLAGMGDLAIDMFF 243
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ +G+ YT + AL AC + N ++H ++ GYE V S+++D+YA+
Sbjct: 244 RMVWAGVSPLVYTVSQALLACRD--NGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAK 301
Query: 369 LGNVKSALELFHRLPKKDV-------------------------------VAWSGLIMGC 397
G + A LF P KD+ V+W+ ++ G
Sbjct: 302 CGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGY 361
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ + A LF+ M ++++ + VL C+ L L +G++VH F K GF
Sbjct: 362 VRSMDLTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYP 421
Query: 458 ITLTSLIDMYLKCGEIDDG--LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+L+ MY KCG + L LF+ ERD SW +I G ++ ++ A+ EM
Sbjct: 422 FLKNALLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEM- 480
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGC 574
PN+ TF L+AC + L+ I M + Y ++ L+ ++D+ +
Sbjct: 481 HYEATPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQS--ALIDMYSKCRL 538
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKAC 601
FD + ++ P + D +W SM+ C
Sbjct: 539 FDYSMRIFEAGPSQ-DVILWNSMIFGC 564
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
S F + V+ + C L +ARKLFD A + WN++IS Y E+ EAI+
Sbjct: 86 STFLFNRAVESLAACGSLTDARKLFD------AMPRRDGGSWNAIISAYSRGEEPTEAIS 139
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L S ++S G+ T S L C L+ + A Q+HG I ++ + I+G+ L+D+
Sbjct: 140 LFSAMNSCGVRPKDVTLASVLGCCAECLDLHG--ARQLHGHIAKRDFQSNVILGTALVDV 197
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + + A F +PK + ++W+ +I G+ LA +F M+ + + +
Sbjct: 198 YGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDLAIDMFFRMVWAGVSPLVYTV 257
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S L C +L G+++H F ++ G+E+ +S++DMY KCG ID LF P
Sbjct: 258 SQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPV 317
Query: 486 RDVVSWTGIIVG---CGQNGRAKE----------------------------AIAYFQEM 514
+D+V T I+ G CG+ AK A+ FQ+M
Sbjct: 318 KDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQM 377
Query: 515 IQSRLKPNEITFLGVLSACR---HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
Q + + +T VL+AC G EE T + K + P L++ ++ + +
Sbjct: 378 RQETKELDAVTLGCVLNACTGLLDLGKGEEVHTF--AFKSGFIGYPFLKN--ALLRMYSK 433
Query: 572 AGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTK 608
GC AE+L+ EM + D W S++ E H+ ++
Sbjct: 434 CGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 471
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 85/315 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN---------- 55
+ +AL C ++++G+ +H ++++G Q + ++++ MYA +++
Sbjct: 257 VSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAP 316
Query: 56 ---------------------DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
DA ++F+ M N+VSW M+T Y + A++L+
Sbjct: 317 VKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQ 376
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M + + E + VL AC+ DL G +H + L N LL MY KCG
Sbjct: 377 MRQE-TKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCG 435
Query: 155 SLTRK----LFDQYSNWAASAYGNVALWNSMLSG-------------------------- 184
L LF+ S + + WNS++SG
Sbjct: 436 CLRSAERLLLFEMGSERDSYS------WNSLISGYERHSMSEAALLALSEMHYEATPNQS 489
Query: 185 -----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
GKQ+HA+ ++ G+ +D+ ++LIDMY KC D + +F
Sbjct: 490 TFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAG 549
Query: 228 PERDVVSWTGIIVGC 242
P +DV+ W +I GC
Sbjct: 550 PSQDVILWNSMIFGC 564
>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 203/704 (28%), Positives = 330/704 (46%), Gaps = 88/704 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+++ N L+ L +A ++FD M +++VSW M++ A+ +Y M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ G + P+ F ++VL ACS D G H + L+ + + N LL MY KCG
Sbjct: 130 VCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 156 LTR---KLFDQYSNWAASAY----GNVALWNSMLSG------------------------ 184
+ ++F+ S +Y G +A N +L
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 185 -------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
GKQ+H ++ GF + SL+++Y K +++ +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 226 FMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCE 265
MPE +VVSW +IVG F+ + T +++ +
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R++F + SA WN+M+SGY E EEAI+ + + D T +
Sbjct: 369 GRRIFSSIPQPSVSA------WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 326 LKACINLLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR- 381
L +C L RF Q+HG+++ + + + S LI +Y+ ++ + +F
Sbjct: 423 LSSCARL-----RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 477
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRR 440
+ + D+ W+ +I G + L++ A +LFR M + N+ ++VL CS L SL
Sbjct: 478 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 537
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q H VK G+ + T+L DMY KCGEID F + ++ V W +I G G
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NGR EA+ +++MI S KP+ ITF+ VL+AC H+GLVE I +SM+ +G+EP L+
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 657
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY C+VD LG+AG +DAE+L P+K +W +L +C H + L +AE+L+
Sbjct: 658 HYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 717
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSW 663
P+ + YV+LSN Y++L WD + ++ K K G SW
Sbjct: 718 DPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 205/430 (47%), Gaps = 41/430 (9%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GK +H F V+ G + + L+D+Y++CG+ D +F+ M RDV SW + F
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT--FR 82
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
C L EA ++FD +V WN+MIS V E+A+
Sbjct: 83 CKVGDLG-------------EACEVFDGMPER------DVVSWNNMISVLVRKGFEEKAL 123
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G +T S L AC +L+ F ++ HG+ V +G + + VG+ L+
Sbjct: 124 VVYKRMVCDGFLPSRFTLASVLSACSKVLD--GVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 365 LYARLGN-VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+YA+ G V + +F L + + V+++ +I G + A +FR M V+
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 424 IISSVLKV------CSCLASL---RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+S++L + C L+ + GKQ+H ++ GF + SL+++Y K +++
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F MPE +VVSW +IVG GQ R+ +++ + M S +PNE+T + VL AC
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF 361
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF---KPDK 591
+G VE IF+S+ +P + + M+ +++A +M F KPDK
Sbjct: 362 RSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDK 416
Query: 592 TIWASMLKAC 601
T + +L +C
Sbjct: 417 TTLSVILSSC 426
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S+ G+ H ++K G D F L MY ++ A + FD + RKN
Sbjct: 526 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 585
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y N R + A+ LY M+ G +P+G + +VL ACS SG ++ G I
Sbjct: 586 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 130 RITR 133
+ R
Sbjct: 645 SMQR 648
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 277/545 (50%), Gaps = 65/545 (11%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
S L GG Q+HA +K GF + + +LIDMY KCG++ +F+ MPER+VVSWT +
Sbjct: 213 GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTAL 272
Query: 239 IVGCF------EC--------------SCFTLSA-------------------------- 252
+VG EC + FTLSA
Sbjct: 273 MVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEG 332
Query: 253 -------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
LV MYS +AR++FD S N+A WNSMISGY Q +++
Sbjct: 333 HDVVANSLVVMYSKGRWTGDARRVFDVIPSR------NLATWNSMISGYAHAGQGRDSLL 386
Query: 306 LLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--DYIVGSNL 362
+ + D +TF S LKAC L +R QVH + G + I+ L
Sbjct: 387 VFREMQRRHDEQPDEFTFASLLKACSGL--GAAREGAQVHAAMAVRGVSPASNAILAGAL 444
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+Y + + A+++F L +++ + W+ +I+G + G A LFR +S +
Sbjct: 445 LDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADG 504
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++SSV+ V + A + +GKQVH + K + SL+DMYLKCG + F+
Sbjct: 505 HVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFRE 564
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MP R+VVSWT +I G G++G +EAI F+EM ++ +E+ +L +LSAC H+GLV+E
Sbjct: 565 MPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDEC 624
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F+ + + + P EHY CMVDLLG+AG +A++LI MP +P +W ++L AC
Sbjct: 625 RRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACR 684
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGM 661
H + + + + LLA ++P YVMLSN+ A G W +R A ++ G K+ G
Sbjct: 685 VHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGC 744
Query: 662 SWIEV 666
SW EV
Sbjct: 745 SWTEV 749
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 229/519 (44%), Gaps = 53/519 (10%)
Query: 1 MDLRR-IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK 59
M+ RR I + LR + S++ G LH ++K G D NNL+ MYA L+ A +
Sbjct: 197 MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGE 256
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M +N+VSWT ++ + + +RL+ M G+ PN F SA LKAC G
Sbjct: 257 VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGT-SPNEFTLSATLKAC--GG 313
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---RKLFDQYSNWAASAYGNVA 176
G IH R E V+ N+L+ MY K G T R++FD + N+A
Sbjct: 314 GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK-GRWTGDARRVFDVIPSR------NLA 366
Query: 177 LWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLKCGEIDDGLALFNF 226
WNSM+SG G+ + V R ++ ++ T SL+ G +G +
Sbjct: 367 TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 426
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
M R V + I+ AL+D+Y C+ L A ++FD N
Sbjct: 427 MAVRGVSPASNAILA---------GALLDVYVKCHRLPVAMQVFDGLERR------NAIQ 471
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----- 341
W ++I G+ Q +EA+ L SSG+ D + +S + + FAL
Sbjct: 472 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFAD-------FALVEQGK 524
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVH + LD V ++L+D+Y + G A F +P ++VV+W+ +I G KHG
Sbjct: 525 QVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHG 584
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITL 460
A LF +M + ++ ++L CS + ++ + C R +
Sbjct: 585 HGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY 644
Query: 461 TSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D+ + GE+ + L MP E V W ++ C
Sbjct: 645 ACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 683
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+I+ +L+ + +SLR G Q+HA +K GF + + +LIDMY KCG++ +F M
Sbjct: 202 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 261
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
PER+VVSWT ++VG +G A+E + F EM S PNE T L AC G A
Sbjct: 262 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC---GGGTRAG 318
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+ G E H +V + + DA ++ +P + + W SM+
Sbjct: 319 VQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSR-NLATWNSMISGYAH 377
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ ++ ++ E P ++ S + A G+
Sbjct: 378 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGL 414
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 334/679 (49%), Gaps = 53/679 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S G ++H +IK G N+ + Y + L+ A + FD K+
Sbjct: 55 LKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113
Query: 70 VSWTTMVTAYTSNKRPN----WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW MV SN W I+ + +PN V++A G
Sbjct: 114 VSWNVMVHGNFSNGSIMAGLCWFIKG-----RFAHFQPNISSLLLVIQAFRELKIYSQGF 168
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS-LTRKLFDQYSNWAASAYGNVALWNSMLSG 184
H I R + N+LL +Y + KLF + S +V W+ M+ G
Sbjct: 169 AFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFAHKLFGEMS-----VRNDVVSWSVMIGG 223
Query: 185 ----GKQVHAFCVKR------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ F + R G + VT+ S++ +I G +
Sbjct: 224 FVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGL-------- 275
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+I E F ++L+DMYS C + A K F + N+ WN M+S Y
Sbjct: 276 ---VIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE------KNIISWNLMLSAY 326
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+LNE + EA+ LL + G D T + L+ + L+ S VHG+I+ GYE
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLD--SLKCRSVHGVIIRKGYES 384
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ ++ +++ID YA+ V+ A +F + KKDVVAWS +I G ++G A +F+ M
Sbjct: 385 NELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM- 443
Query: 415 NSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
N++V N I ++++ C+ A LR+ K H V+RG E TS+IDMY KCG+
Sbjct: 444 --NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGD 501
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
I+ + F +P+++VV W+ +I NG A EA+ F+++ Q+ KPN +T L +LSA
Sbjct: 502 IEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSA 561
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP--FKPD 590
C H GL+EE + FTSM ++G+EP LEHY C+VD+L +AG F++A +LI ++P +
Sbjct: 562 CSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAG 621
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+IW ++L +C ++ N L S A ++L P + Y++ SN+YA G+ +K+R+
Sbjct: 622 ASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRL 681
Query: 651 GKKLGEK-KAGMSWIEVSS 668
K+ G K AG S + ++S
Sbjct: 682 AKEKGVKVVAGYSLVHINS 700
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 187/443 (42%), Gaps = 96/443 (21%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L+ C + I G +H +I GL D+F GN+L+ MY+ +++ A K F E+
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KNI+SW M++AY N+ A+ L M+ G+ E + + VL+ D R
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGA-EKDEVTLANVLQIAKHFLDSLKCR 371
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYG----- 173
+H I R+ E + +L+N+++D Y KC L R +FD + W+ G
Sbjct: 372 SVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNG 431
Query: 174 -------------------NVALWNSM--------LSGGKQVHAFCVKRGFEKEDVTLTS 206
NV++ N M L K H V+RG E TS
Sbjct: 432 KPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTS 491
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+IDMY KCG+I+ + FN +P+++VV W+ +I S F ++ L EA
Sbjct: 492 IIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMI------SAFRINGLAH---------EA 536
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
LF++ AL +LLS G+ + +F +++
Sbjct: 537 LMLFEKIKQNGTKPNAVTAL------------------SLLSACSHGGLMEEGLSFFTSM 578
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK- 385
+Q HG + G E Y S ++D+ +R G ALEL +LPK+
Sbjct: 579 --------------VQKHG--IEPGLE-HY---SCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 386 --DVVAWSGLIMGCTKHGLNSLA 406
W L+ C +G SL
Sbjct: 619 EAGASIWGTLLSSCRSYGNISLG 641
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 37/317 (11%)
Query: 301 EEAITLLSHIHSSGMCI-DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
+EA+ L I SG + D++ S LKAC N +FN +HG ++ G + +
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFN--LGTAMHGCLIKQGCQSSTSIA 85
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++ ID Y + G++ SA F KD V+W+ ++ G +G + +A L + I
Sbjct: 86 NSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNG-SIMAGLCW--FIKGRFA 142
Query: 420 VNQFIISSVLKVCSCLASLR---RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
Q ISS+L V L+ +G H + + GF SL+ +Y E+
Sbjct: 143 HFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLY---AEVHMY 199
Query: 477 LA--LFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSA 532
A LF M R DVVSW+ +I G Q G ++ F+ M+ ++ + P+ +T + VL A
Sbjct: 200 FAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259
Query: 533 CRH-----AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
C + G + IF GLE L ++D+ + CF+ A F
Sbjct: 260 CTNLKDISLGTMVHGLVIFR------GLEDDLFVGNSLIDMYSK--CFNVHSAFKA---F 308
Query: 588 K--PDKTI--WASMLKA 600
K P+K I W ML A
Sbjct: 309 KEIPEKNIISWNLMLSA 325
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/632 (29%), Positives = 304/632 (48%), Gaps = 67/632 (10%)
Query: 39 FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
F N + A SL DA KLFD M R++ SW +++AY+ + P AI L++ M
Sbjct: 88 FLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSC 147
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT- 157
G V P ++VL C+ DL R +H I + + + +L L+D+Y KC +L+
Sbjct: 148 G-VRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSE 206
Query: 158 -RKLFDQYSN------------WAASAYGNVAL-------W------------------- 178
R+ FD + + G++A+ W
Sbjct: 207 ARRAFDGIPKPNDISWNVIIRRYLLAGMGDMAIDMFFRMVWAGVSPLVYTVSQALLACRD 266
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N L G+++H F ++ G+E+ +S++DMY KCG ID LF+ P +D+V T I
Sbjct: 267 NGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSI 326
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ G ++C + +A+++F+ N+ WN+M++GYV +
Sbjct: 327 VSG---------------LASCGRITDAKRVFEGMEEH------NLVSWNAMLTGYVRSM 365
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
A+ L + +D+ T L AC LL+ +VH SG+ +
Sbjct: 366 DLTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGK--GEEVHTFAFKSGFIGYPFL 423
Query: 359 GSNLIDLYARLGNVKSA--LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ L+ +Y++ G ++SA L LF ++D +W+ LI G +H ++ A L +M +
Sbjct: 424 KNALLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEM-HY 482
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
NQ SS L C+ + L GKQ+HA+ ++ G+ +DI ++LIDMY KC D
Sbjct: 483 EATPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYS 542
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+ +F+ P +DV+ W +I GC NG+ + + F EM + + P+ +TFLG L +C
Sbjct: 543 MRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISE 602
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G V + FT M EY + P +EHY CM++LLG+ G + E I MPF+P +W
Sbjct: 603 GHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDFIGHMPFEPTTAMWLR 662
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
+ C + N KL A+ + ++P P ++
Sbjct: 663 IFDCCREYGNRKLGERAAQCINDSNPLTPVRF 694
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 212/464 (45%), Gaps = 65/464 (14%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + + LH I K ++ G L+ +Y +L++A + FD + + N +SW
Sbjct: 163 CAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISW 222
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ Y + AI ++ M+ + V P + S L AC +G L+ GR IH +
Sbjct: 223 NVIIRRYLLAGMGDMAIDMFFRMV-WAGVSPLVYTVSQALLACRDNGALEEGRRIHTFVL 281
Query: 133 REKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG----GK 186
R E + ++++DMY KCG+ L ++LFD + ++ + S++SG G+
Sbjct: 282 RHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFD------LAPVKDIVMSTSIVSGLASCGR 335
Query: 187 QVHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
A V G E+ + V+ +++ Y++ ++ L LF M ++ + +GC
Sbjct: 336 ITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQM-RQETKELDAVTLGCVLN 394
Query: 246 SC-------------------------FTLSALVDMYSNCNVLCEARKLF--------DQ 272
+C F +AL+ MYS C L A +L D
Sbjct: 395 ACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDS 454
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
YS WNS+ISGY + +E A+ LS +H S TF+SAL AC N+
Sbjct: 455 YS------------WNSLISGYERHSMSEAALLALSEMHYEATPNQS-TFSSALAACANI 501
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
N Q+H ++ +GY +D I+ S LID+Y++ ++ +F P +DV+ W+
Sbjct: 502 FLLNH--GKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNS 559
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+I GC +G LF +M S Q + ++ + + SC++
Sbjct: 560 MIFGCAYNGKGEYGLELFFEM--SKQGITPDSVTFLGALVSCIS 601
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
S F + V+ + C L +ARKLFD A + WN++IS Y E+ EAI+
Sbjct: 86 STFLFNRAVESLAACGSLTDARKLFD------AMPRRDGGSWNAIISAYSRGEEPTEAIS 139
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L S ++S G+ T S L C L+ + A Q+HG I ++ + I+G+ L+D+
Sbjct: 140 LFSAMNSCGVRPKDVTLASVLGCCAECLDLHG--ARQLHGHIAKRDFQSNVILGTALVDV 197
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + + A F +PK + ++W+ +I G+ +A +F M+ + + +
Sbjct: 198 YGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDMAIDMFFRMVWAGVSPLVYTV 257
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S L C +L G+++H F ++ G+E+ +S++DMY KCG ID LF P
Sbjct: 258 SQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPV 317
Query: 486 RDVVSWTGIIVG---CGQNGRAKE----------------------------AIAYFQEM 514
+D+V T I+ G CG+ AK A+ FQ+M
Sbjct: 318 KDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQM 377
Query: 515 IQSRLKPNEITFLGVLSACR---HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
Q + + +T VL+AC G EE T + K + P L++ ++ + +
Sbjct: 378 RQETKELDAVTLGCVLNACTGLLDLGKGEEVHTF--AFKSGFIGYPFLKN--ALLRMYSK 433
Query: 572 AGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTK 608
GC AE+L+ EM + D W S++ E H+ ++
Sbjct: 434 CGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 471
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 85/315 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN---------- 55
+ +AL C ++++G+ +H ++++G Q + ++++ MYA +++
Sbjct: 257 VSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAP 316
Query: 56 ---------------------DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
DA ++F+ M N+VSW M+T Y + A++L+
Sbjct: 317 VKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQ 376
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M + + E + VL AC+ DL G +H + L N LL MY KCG
Sbjct: 377 MRQE-TKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCG 435
Query: 155 SLTRK----LFDQYSNWAASAYGNVALWNSMLSG-------------------------- 184
L LF+ S + + WNS++SG
Sbjct: 436 CLRSAERLLLFEMGSERDSYS------WNSLISGYERHSMSEAALLALSEMHYEATPNQS 489
Query: 185 -----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
GKQ+HA+ ++ G+ +D+ ++LIDMY KC D + +F
Sbjct: 490 TFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAG 549
Query: 228 PERDVVSWTGIIVGC 242
P +DV+ W +I GC
Sbjct: 550 PSQDVILWNSMIFGC 564
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 315/621 (50%), Gaps = 37/621 (5%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
L DA LFD M RKN+V+WTT ++ T N RP A ++ MLE G V PN F +A L
Sbjct: 86 LGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESG-VAPNDFACNAALA 144
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASA 171
AC+ +G L LG +H R D + + L+++Y +CGSL ++F + A
Sbjct: 145 ACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRME--APDV 202
Query: 172 YGNVALWNSMLSGG---KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
G +L +++ G + V C ++G + + T+TS++ E G+
Sbjct: 203 VGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSML------AECPRGIG---- 252
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+ + ++G S + +AL+D YS A+ +F+ S NV
Sbjct: 253 ---EQIHGYMLKVMG--SQSVYASTALIDFYSRYGDFGTAKTVFENLES------KNVVS 301
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
W SM+ + + + ++A+ + S + S G+ + + F+ AL AC ++ Q+H
Sbjct: 302 WCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVC-----LGRQIHCS 356
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ D V + L+ +Y R G V + ++ D+V+W+ I ++G + A
Sbjct: 357 AIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKA 416
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
L M + N + SS L C+ LA L +G+Q+H +K G + + T +LI+M
Sbjct: 417 VALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINM 476
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I F M DV+SW +I G Q+G A A+ F EM S +P++ TF
Sbjct: 477 YSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTF 536
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
L VL C HAGLV+E T F M YGL P HY CM+D+LG+ G F +A ++I MP
Sbjct: 537 LSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMP 596
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F+PD IW ++L +C+ H N + + A++L+ S D + YV++SN+YA W +
Sbjct: 597 FEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAER 656
Query: 647 VRKAGKKLGEKK-AGMSWIEV 666
VR+ ++G KK AG SWIEV
Sbjct: 657 VRRRMDEIGVKKDAGWSWIEV 677
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++ +D + G + AL+LF R+P+K+VVAW+ I GCT++G A +F DM+
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S N F ++ L C+ +L G+QVH+ V+ GF + + LI++Y +CG +
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F+ M DVV +T ++ +NG A+ +M + L+PNE T +L+ C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
G+ E+ I M G + + ++D + G F A+ + + K + W
Sbjct: 249 R-GIGEQ---IHGYMLKVMGSQ-SVYASTALIDFYSRYGDFGTAKTVFENLESK-NVVSW 302
Query: 595 ASMLKAC 601
SM++ C
Sbjct: 303 CSMMQLC 309
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 163/425 (38%), Gaps = 108/425 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++K SQ ++ L+ Y+ + A +F+ + KN+VSW +M+
Sbjct: 252 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIR 311
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ R + A+R+++ M+ G V+PN F +S L AC G + LGR IH + L D
Sbjct: 312 DGRLDDALRVFSEMISEG-VQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIR 367
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYGN---------VALWNSM---- 181
+ N LL MY + G S + + N W A+ N VAL M
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
L G+Q+H +K G + + T +LI+MY KCG I
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ M DV+SW +I G + +
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQ------------------------------------H 511
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRF 339
G+ L A+ S + SS D TF S L C L+ F
Sbjct: 512 GDANL----------------ALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETF 555
Query: 340 ALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIM 395
Q+ +GL T + + +ID+ R G AL + +P + DV+ W L+
Sbjct: 556 FRQMTDRYGLTPTPSHY------ACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
Query: 396 GCTKH 400
C H
Sbjct: 610 SCKLH 614
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 58/282 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL CG S+ G+ +HC IK L DI N LLSMY +++ + ++ +
Sbjct: 340 ALSACG---SVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPD 396
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++A N A+ L M G PN + +S+ L +C+ L GR +H
Sbjct: 397 LVSWTAAISANFQNGFSEKAVALLLQMHSEG-FTPNDYAFSSGLSSCADLALLHQGRQLH 455
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ ++ N L++MY KCG + R FD +V WNS++ G
Sbjct: 456 CLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTH------DVMSWNSLIHGLA 509
Query: 187 Q---------------------------------VHAFCVKRG-------FEKEDVTLTS 206
Q HA VK G ++ +T T
Sbjct: 510 QHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTP 569
Query: 207 -----LIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+IDM + G + L + MP E DV+ W ++ C
Sbjct: 570 SHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASC 611
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 315/621 (50%), Gaps = 37/621 (5%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
L DA LFD M RKN+V+WTT ++ T N RP A ++ MLE G V PN F +A L
Sbjct: 86 LGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESG-VAPNDFACNAALA 144
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASA 171
AC+ +G L LG +H R D + + L+++Y +CGSL ++F + A
Sbjct: 145 ACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRME--APDV 202
Query: 172 YGNVALWNSMLSGG---KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
G +L +++ G + V C ++G + + T+TS++ E G+
Sbjct: 203 VGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSML------AECPRGIG---- 252
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+ + ++G S + +AL+D YS A+ +F+ S NV
Sbjct: 253 ---EQIHGYMLKVMG--SQSVYASTALIDFYSRYGDFGTAKTVFENLES------KNVVS 301
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
W SM+ + + + ++A+ + S + S G+ + + F+ AL AC ++ Q+H
Sbjct: 302 WCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVC-----LGRQIHCS 356
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ D V + L+ +Y R G V + ++ D+V+W+ I ++G + A
Sbjct: 357 AIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKA 416
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
L M + N + SS L C+ LA L +G+Q+H +K G + + T +LI+M
Sbjct: 417 VALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINM 476
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I F M DV+SW +I G Q+G A A+ F EM S +P++ TF
Sbjct: 477 YSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTF 536
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
L VL C HAGLV+E T F M YGL P HY CM+D+LG+ G F +A ++I MP
Sbjct: 537 LSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMP 596
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F+PD IW ++L +C+ H N + + A++L+ S D + YV++SN+YA W +
Sbjct: 597 FEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAER 656
Query: 647 VRKAGKKLGEKK-AGMSWIEV 666
VR+ ++G KK AG SWIEV
Sbjct: 657 VRRRMDEIGVKKDAGWSWIEV 677
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++ +D + G + AL+LF R+P+K+VVAW+ I GCT++G A +F DM+
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
S N F ++ L C+ +L G+QVH+ V+ GF + + LI++Y +CG +
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F+ M DVV +T ++ +NG A+ +M + L+PNE T +L+ C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
G+ E+ I M G + + ++D + G F A+ + + K + W
Sbjct: 249 R-GIGEQ---IHGYMLKVMGSQ-SVYASTALIDFYSRYGDFGTAKTVFENLESK-NVVSW 302
Query: 595 ASMLKAC 601
SM++ C
Sbjct: 303 CSMMQLC 309
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 163/425 (38%), Gaps = 108/425 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++K SQ ++ L+ Y+ + A +F+ + KN+VSW +M+
Sbjct: 252 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIR 311
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ R + A+R+++ M+ G V+PN F +S L AC G + LGR IH + L D
Sbjct: 312 DGRLDDALRVFSEMISEG-VQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIR 367
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYGN---------VALWNSM---- 181
+ N LL MY + G S + + N W A+ N VAL M
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
L G+Q+H +K G + + T +LI+MY KCG I
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ M DV+SW +I G + +
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQ------------------------------------H 511
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRF 339
G+ L A+ S + SS D TF S L C L+ F
Sbjct: 512 GDANL----------------ALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETF 555
Query: 340 ALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIM 395
Q+ +GL T + + +ID+ R G AL + +P + DV+ W L+
Sbjct: 556 FRQMTDRYGLTPTPSHY------ACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
Query: 396 GCTKH 400
C H
Sbjct: 610 SCKLH 614
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 112/282 (39%), Gaps = 58/282 (20%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL CG S+ G+ +HC IK L DI N LLSMY +++ + ++ +
Sbjct: 340 ALSACG---SVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPD 396
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++A N A+ L M G PN + +S+ L +C+ L GR +H
Sbjct: 397 LVSWTAAISANFQNGFSEKAVALLLQMHSEG-FTPNDYAFSSGLSSCADLALLHQGRQLH 455
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ ++ N L++MY KCG + R FD +V WNS++ G
Sbjct: 456 CLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTH------DVMSWNSLIHGLA 509
Query: 187 Q---------------------------------VHAFCVKRG-------FEKEDVTLTS 206
Q HA VK G ++ +T T
Sbjct: 510 QHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTP 569
Query: 207 -----LIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+IDM + G + L + MP E DV+ W ++ C
Sbjct: 570 SHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASC 611
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 314/641 (48%), Gaps = 77/641 (12%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
++ S I + N+L++ Y+ + A +FDEM KNI+SW ++V Y NKRP A
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+++ M E ++ NG + + +G ++ R + +R+ E + V ++ Y
Sbjct: 151 MFDKMSERNTISWNGLVSGYIN-----NGMINEAREVFDRMP----ERNVVSWTAMVRGY 201
Query: 151 VKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
VK G ++ LF Q NV W ML G
Sbjct: 202 VKEGMISEAETLFWQMPE------KNVVSWTVMLGG------------------------ 231
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
L+ G ID+ LF+ MPE+DVV+ T +I G Y L EAR
Sbjct: 232 --LLQEGRIDEACRLFDMMPEKDVVTRTNMIGG---------------YCQVGRLVEARM 274
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFD+ NV W +MI+GYV N+Q + A L + + ++T+ LK
Sbjct: 275 LFDEMPR------RNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKG 324
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKDV 387
N + L + + +V N +I + + G V A ++F ++ +KD
Sbjct: 325 YTNCGRLDEASEL-------FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDE 377
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
WS +I + GL A LFR M N + SVL VC+ LA+L G+++HA
Sbjct: 378 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 437
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
V+ F+ + + L+ MY+KCG + +F +DVV W II G Q+G EA
Sbjct: 438 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 497
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F +M S + P+++TF+GVLSAC + G V++ IF SM+ +Y +E +EHY CMVD
Sbjct: 498 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 557
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG ++A LI +MP + D IW ++L AC TH L + A++LL P++
Sbjct: 558 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 617
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEVS 667
+++LSN+YA+ G WD ++++R+ + + K G SWI V
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVE 658
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 162/421 (38%), Gaps = 115/421 (27%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
CR+ +D+ T N++ Y L +A LFDEM R+N+VSWTTM+T Y N++ +
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVD 301
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A +L+ M E V ++A+LK + G LD + + + + V N +
Sbjct: 302 IARKLFEVMPEKNEVS-----WTAMLKGYTNCGRLDEASELFNAMPIKSV----VACNAM 352
Query: 147 LDMYVKCGSL--TRKLFDQY-----SNWAA--SAYGNVAL-------------------W 178
+ + + G + R++FDQ W+A Y L +
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 179 NSMLS------------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
S++S G+++HA V+ F+ + + L+ MY+KCG + +F+
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+DVV W II G Y+ + EA ++F
Sbjct: 473 FAVKDVVMWNSIITG---------------YAQHGLGVEALRVFHD-------------- 503
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
+H SG+ D TF L AC N GL
Sbjct: 504 -----------------------MHFSGIMPDDVTFVGVLSACSYTGNVKK-------GL 533
Query: 347 IVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTK 399
+ + E Y V ++DL R G + A++L ++P + D + W L+ C
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT 593
Query: 400 H 400
H
Sbjct: 594 H 594
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C ++ G+ +H ++++ D++ + LLSMY +L A ++FD A
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++V W +++T Y + A+R++ H + + + P+ + VL ACS +G++ G
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVF-HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 126 LIHERI-TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
I + T+ ++E ++D+ + G L + D A + +W ++L
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM-DLIEKMPMEA--DAIIWGALLGA 590
Query: 185 GKQVHAFCVKRGFEKEDVTLTS--------LIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ + K+ + L L ++Y G DD L M +R V +
Sbjct: 591 CRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYP 650
Query: 237 G 237
G
Sbjct: 651 G 651
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 222/767 (28%), Positives = 347/767 (45%), Gaps = 124/767 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFD-----E 63
L+ CG +++ GK++H II G D + +L++ Y S +A K+FD E
Sbjct: 56 LKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESE 115
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
++ +++ W ++V Y I + M +G V P+ + +L A G L
Sbjct: 116 VSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFG-VRPDAYSLCILLGASD--GHLGY 172
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM 181
+ IH R+ D L + L+ MY CG +LF + + GNV WN M
Sbjct: 173 AKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELED-----KGNVVAWNVM 227
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+ G G QVH VK GF
Sbjct: 228 IGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGF 287
Query: 198 EKEDVTLTSLIDMYLKC-------------------------------GEIDDGLALFNF 226
E + TSL+ MY KC G DGL ++
Sbjct: 288 ENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQ 347
Query: 227 MP----ERDVVSWTGIIVGC--------------------FECSCFTLSALVDMYSNCNV 262
M D ++ T ++ C + + SAL+ MYS C
Sbjct: 348 MKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGN 407
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+A +F+ +V W SMISG+ N + EA+ + + G DS
Sbjct: 408 SDDANSIFNTIKGR------DVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIM 461
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S + AC L N N +HGL + SG E D V S+L+D+Y++ K + +F +
Sbjct: 462 ASVVSACTGLKNVN--LGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDM 519
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P K++VAW+ +I ++GL L+ LF M + I+SVL S +A LR+GK
Sbjct: 520 PLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGK 579
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
VH + +++ + +LIDMY+KCG + +F+ M + ++V+W +I GCG +G
Sbjct: 580 AVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHG 639
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+A++ F EM + P++ITF+ +L++C H G +EE +F M E+G+EP +EHY
Sbjct: 640 DWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHY 699
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
+VDLLG+AG DDA + +P +PD++IW S+L +C H+N +L + A +LL P
Sbjct: 700 VNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEP 759
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
S YV L N+Y + D + +R + K+ G KK G SWIEV +
Sbjct: 760 SRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGN 806
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/639 (23%), Positives = 264/639 (41%), Gaps = 117/639 (18%)
Query: 92 YNHMLEYGSVEP---NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVLMNTLL 147
Y L++ S P F Y ++LKAC +L G+ IH I + Y D + +L+
Sbjct: 33 YVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLI 92
Query: 148 DMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG--------------------- 184
+ Y KCGS K+FD+ S +V WNS+++G
Sbjct: 93 NFYFKCGSFGNAVKVFDKLPESEVSGQ-DVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFG 151
Query: 185 ---------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
KQ+H + V++ F + + LI MY CG D L
Sbjct: 152 VRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRL 211
Query: 224 FNFMPER-DVVSWTGIIVGCFECSCF------------------------TLSA------ 252
F + ++ +VV+W +I G E + TLSA
Sbjct: 212 FKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEF 271
Query: 253 -------------------------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
L+ MYS C ++ +A +FDQ S LW
Sbjct: 272 VSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVS------VKKTELW 325
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N+MIS YV N ++ + + + + + DS T T+ L +C + +++ F +H +
Sbjct: 326 NAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYD--FGRLIHAEL 383
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
V + + + S L+ +Y++ GN A +F+ + +DVVAW +I G ++ A
Sbjct: 384 VKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEAL 443
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
+ M + + I++SV+ C+ L ++ G +H +K G E++ +SL+DMY
Sbjct: 444 EFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMY 503
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
K +F MP +++V+W II +NG +I+ F +M Q L P+ ++
Sbjct: 504 SKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSIT 563
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VL + ++ + + + + + L+ ++D+ + G A+ + M
Sbjct: 564 SVLVSVSSVAVLRKGKAVHGYLIRQR-IPSDLQLENALIDMYIKCGFLKYAQHIFQNM-L 621
Query: 588 KPDKTIWASMLKACETHNN-TKLVSIIAE-QLLATSPED 624
+ + W M+ C +H + K +S+ E + +P+D
Sbjct: 622 QTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDD 660
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 314/641 (48%), Gaps = 77/641 (12%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
++ S I + N+L++ Y+ + A +FDEM KNI+SW ++V Y NKRP A
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+++ M E ++ NG + + +G ++ R + +R+ E + V ++ Y
Sbjct: 151 MFDKMSERNTISWNGLVSGYIN-----NGMINEAREVFDRMP----ERNVVSWTAMVRGY 201
Query: 151 VKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
VK G ++ LF Q NV W ML G
Sbjct: 202 VKEGMISEAETLFWQMPE------KNVVSWTVMLGG------------------------ 231
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
L+ G ID+ LF+ MPE+DVV+ T +I G Y L EAR
Sbjct: 232 --LLQEGRIDEACRLFDMMPEKDVVTRTNMIGG---------------YCQVGRLVEARM 274
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFD+ NV W +MI+GYV N+Q + A L + + ++T+ LK
Sbjct: 275 LFDEMPR------RNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKG 324
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKDV 387
N + L + + +V N +I + + G V A ++F ++ +KD
Sbjct: 325 YTNCGRLDEASEL-------FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDE 377
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
WS +I + GL A LFR M N + SVL VC+ LA+L G+++HA
Sbjct: 378 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 437
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
V+ F+ + + L+ MY+KCG + +F +DVV W II G Q+G EA
Sbjct: 438 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 497
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F +M S + P+++TF+GVLSAC + G V++ IF SM+ +Y +E +EHY CMVD
Sbjct: 498 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 557
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG ++A LI +MP + D IW ++L AC TH L + A++LL P++
Sbjct: 558 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 617
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEVS 667
+++LSN+YA+ G WD ++++R+ + + K G SWI V
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVE 658
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 162/421 (38%), Gaps = 115/421 (27%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
CR+ +D+ T N++ Y L +A LFDEM R+N+VSWTTM+T Y N++ +
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVD 301
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A +L+ M E V ++A+LK + G LD + + + + V N +
Sbjct: 302 IARKLFEVMPEKNEVS-----WTAMLKGYTNCGRLDEASELFNAMPIKSV----VACNAM 352
Query: 147 LDMYVKCGSL--TRKLFDQY-----SNWAA--SAYGNVAL-------------------W 178
+ + + G + R++FDQ W+A Y L +
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 179 NSMLS------------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
S++S G+++HA V+ F+ + + L+ MY+KCG + +F+
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+DVV W II G Y+ + EA ++F
Sbjct: 473 FAVKDVVMWNSIITG---------------YAQHGLGVEALRVFHD-------------- 503
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
+H SG+ D TF L AC N GL
Sbjct: 504 -----------------------MHFSGIMPDDVTFVGVLSACSYTGNVKK-------GL 533
Query: 347 IVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTK 399
+ + E Y V ++DL R G + A++L ++P + D + W L+ C
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT 593
Query: 400 H 400
H
Sbjct: 594 H 594
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C ++ G+ +H ++++ D++ + LLSMY +L A ++FD A
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++V W +++T Y + A+R++ H + + + P+ + VL ACS +G++ G
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVF-HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 126 LIHERI-TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
I + T+ ++E ++D+ + G L + D A + +W ++L
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM-DLIEKMPMEA--DAIIWGALLGA 590
Query: 185 GKQVHAFCVKRGFEKEDVTLTS--------LIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+ + K+ + L L ++Y G DD L M +R V +
Sbjct: 591 CRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYP 650
Query: 237 G 237
G
Sbjct: 651 G 651
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 246/421 (58%), Gaps = 14/421 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L++MY +L +A+ +FD+ NV W +MIS Y + N++A+ L
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPD------RNVVSWTTMISAYSAAKLNDKALEFL 54
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G+ + +T++S L+AC L N Q+H I+ G + D V S LID+Y+
Sbjct: 55 VLMLREGVRPNMFTYSSVLRACDGLFNLR-----QLHCCIIKIGLDSDVFVRSALIDVYS 109
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
R G +++AL +F + D+V WS +I G ++ A LF+ M + Q ++S
Sbjct: 110 RWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTS 169
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL+ C+ LA L G+QVH +K ++++ I +L+DMY KCG ++D A+F M E+D
Sbjct: 170 VLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKD 227
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V+SW+ +I G QNG +KEA+ F+ M +KPN +T +GVL AC HAGLVEE F
Sbjct: 228 VISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFH 287
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK +G++P EHY CM+DLLG+AG +A LI EM +PD W ++L AC H N
Sbjct: 288 SMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV 347
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ A+Q+L P+D YV+LSN+YA W+ +++VR+ G +K+ G SWIEV
Sbjct: 348 DVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEV 407
Query: 667 S 667
S
Sbjct: 408 S 408
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 58/249 (23%)
Query: 39 FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
F N L++MY F L+DA +FD+M +N+VSWTTM++AY++ K + A+ ML
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G V PN F YS+VL+AC G +L R +H I + L+ D + + L+D+Y + G L
Sbjct: 61 G-VRPNMFTYSSVLRAC--DGLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 159 --KLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
++FD+ G++ +W+S+++G
Sbjct: 117 ALRVFDEMVT------GDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSV 170
Query: 185 ------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G+QVH +K ++++ + +L+DMY KCG ++D A+F M E+DV
Sbjct: 171 LRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDV 228
Query: 233 VSWTGIIVG 241
+SW+ +I G
Sbjct: 229 ISWSTMIAG 237
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 33/237 (13%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR C +++Q LHC IIK GL D+F + L+ +Y+ + L +A ++FDEM +
Sbjct: 72 VLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGD 128
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V W++++ + N + A+RL+ M G + + ++VL+AC+ L+LGR +H
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTL-TSVLRACTGLALLELGRQVH 187
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+ K + D +L N LLDMY KCGSL D + + +V W++M++G Q
Sbjct: 188 VHVL--KYDQDLILNNALLDMYCKCGSLE----DANAVFVRMVEKDVISWSTMIAGLAQ- 240
Query: 189 HAFCVKRGFEKEDVTL-------------TSLIDMYLKC---GEIDDGLALFNFMPE 229
G+ KE + L +++ + C G +++GL F+ M E
Sbjct: 241 ------NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ LR C ++ G+ +H ++KY QD+ N LL MY SL DA+ +F M
Sbjct: 167 LTSVLRACTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMV 224
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
K+++SW+TM+ N A++L+ M G ++PN VL ACS +G ++ G
Sbjct: 225 EKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG-IKPNYVTIVGVLFACSHAGLVEEG 282
>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 699
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 332/669 (49%), Gaps = 68/669 (10%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
++ HC IK G D++T NNL++ Y+ L A +LFD+M +++ VSW +++ Y +
Sbjct: 19 QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
+ +L N M G N + + LK + + L+LG+ +H + + +L +
Sbjct: 79 ADLDSTWQLLNAMRVSGHAFDN-HTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFS 137
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV----HAFCVKRGFE 198
+ LLDMY KCG ++ D + N WN++++G +V AF + R E
Sbjct: 138 GSALLDMYAKCG----RVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQE 193
Query: 199 KEDV--------TLTSLID--------MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
E V L +L+D M L C + GL FN +
Sbjct: 194 LEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIV--------------- 238
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+A++ YS C L +A ++F ++ WNSM++ Y+L+++
Sbjct: 239 -------CNAIITAYSECCSLQDAERVF---VGAVTVTCRDLVTWNSMLAAYLLHKKENL 288
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A + + S G D Y++T + C ++ SR +HGL++ G E+ V + L
Sbjct: 289 AFDVFIEMQSFGFEPDDYSYTGVISGC-SIKEHKSR-GESLHGLVIKRGAEVSVPVSNAL 346
Query: 363 IDLYARLGN--VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
I +Y N ++ AL +F + KD W+ ++ G + G + A LF + + ++
Sbjct: 347 IAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEI 406
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ + S+V++ CS LA+L+ G+QVH +K GF+ + Y+ D F
Sbjct: 407 DDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDT---------NKYVG----KDAKKCF 453
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ + + W II G Q+G+ A+ F M + ++KP+ ITF+ VL+AC H GLVE
Sbjct: 454 ETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVE 513
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E I SM+ ++G+ +EHY C VDL G+AG ++ + L+ MPF+PD + ++L A
Sbjct: 514 EGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGA 573
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA- 659
C + N +L S +A+ LL PED S YV+LS++Y L MWD + V + ++ G KK
Sbjct: 574 CRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDEKASVTRLMRERGVKKVP 633
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 634 GWSWIEVKN 642
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 226/532 (42%), Gaps = 89/532 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ + + ++ G+ LH +IK L++++F+G+ LL MYA ++DA +F M N
Sbjct: 107 LKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNY 166
Query: 70 VSWTTMVTAYTSNKRPN---WAIR---LYNHMLEYGSVEP-----NGF-MYSAVLKACSL 117
VSW T++ Y+ + W +R L ++ G+V P +G YS V++
Sbjct: 167 VSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQ---- 222
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
+H +I + LE ++ N ++ Y +C SL + + ++
Sbjct: 223 ---------LHCKIVKHGLEAFNIVCNAIITAYSECCSL-QDAERVFVGAVTVTCRDLVT 272
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
WNSML+ A+ + + KE++ I+M F F P D S+TG
Sbjct: 273 WNSMLA------AYLLHK---KENLAFDVFIEM-----------QSFGFEP--DDYSYTG 310
Query: 238 IIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+I GC E S +AL+ MY + C + D +
Sbjct: 311 VISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC----MEDALRIFF 366
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ + WNS+++GYV ++E+A+ L + S + ID YTF++ ++ C +L
Sbjct: 367 SMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATL-- 424
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+ QVH L + G++ + VG K A + F + + W+ +I G
Sbjct: 425 QLGQQVHVLSLKVGFDTNKYVG-------------KDAKKCFETTSNDNAIIWNSIIFGY 471
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKE 456
+HG ++A LF M + +VL CS + G++ + + G
Sbjct: 472 AQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLR 531
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
+D+Y + G +++G AL + MP E D + ++ C G + A
Sbjct: 532 MEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELA 583
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 206/783 (26%), Positives = 348/783 (44%), Gaps = 162/783 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY----------------- 48
+ +ALR CG R ++ ++LH R++ GL+ +F N LL Y
Sbjct: 31 LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90
Query: 49 ---------------ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
A SL+DA +LF M R+++ SW T+++ Y + R A+ +
Sbjct: 91 TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M G PN F + +K+C G ++ + +T+ + D + ++DM+V+C
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRC 210
Query: 154 GSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
G++ K F Q V NSML+G Y
Sbjct: 211 GAVDFASKQFSQIER------PTVFCRNSMLAG--------------------------Y 238
Query: 212 LKCGEIDDGLALFNFMPERDVVSW-----------------------------------T 236
K +D L LF MPERDVVSW T
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298
Query: 237 GIIVGCFECSC--------------------FTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+ C + S + SA+V++Y+ C EAR++F
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
N W +I G++ E++ L + + + M +D + + + C N ++
Sbjct: 359 ------NTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMC 412
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
A Q+H L + SG+ ++ ++LI +YA+ GN+++A +F + ++D+V+W+G++
Sbjct: 413 --LARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTA 470
Query: 397 CTKHGLNSLAYLLF-----RDMINSNQDVNQFI--------------------------- 424
++ G A F R++I N + +I
Sbjct: 471 YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVT 530
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
++ + C+ + + + G Q+ VK G + + ++I MY KCG I + +F F+
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+D+VSW +I G Q+G K+AI F +M++ KP+ I+++ VLS+C H+GLV+E
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKF 650
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F +K ++ + P LEH+ CMVDLL +AG +A+ LI EMP KP +W ++L AC+TH
Sbjct: 651 YFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTH 710
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSW 663
N +L + A+ L D Y++L+ +YA G ++VRK + G KK G SW
Sbjct: 711 GNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSW 770
Query: 664 IEV 666
+EV
Sbjct: 771 MEV 773
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 197/453 (43%), Gaps = 57/453 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +L C + S+ GK LH ++I+ D + + ++ +YA +A ++
Sbjct: 292 LDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRV 351
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSG 119
F + +N VSWT ++ + + ++ L+N M E +V+ F + ++ CS
Sbjct: 352 FSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQ--FALATIISGCSNRM 409
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
D+ L R +H + V+ N+L+ MY KCG+L + S +++ ++ W
Sbjct: 410 DMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQ----NAESIFSSMEERDIVSWT 465
Query: 180 SMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PERDV- 232
ML+ QV R F + +T +++ Y++ G +DGL +++ M E+DV
Sbjct: 466 GMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVI 525
Query: 233 ---VSWTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
V++ + GC + L +A++ MYS C + EARK+
Sbjct: 526 PDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKI 585
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD S ++ WN+MI+GY + ++AI + + G D ++ + L +C
Sbjct: 586 FDFLSR------KDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSC 639
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP 383
S L G + D+ V L +DL AR GN+ A L +P
Sbjct: 640 -------SHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMP 692
Query: 384 KKDVV-AWSGLIMGCTKHGLNSLAYLLFRDMIN 415
K W L+ C HG N LA L + + +
Sbjct: 693 MKPTAEVWGALLSACKTHGNNELAELAAKHLFD 725
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 210/731 (28%), Positives = 336/731 (45%), Gaps = 95/731 (12%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++Q LH II L D L+ Y+ L + +F + W ++
Sbjct: 13 TLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLK 72
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N AI LY+ ML ++ N + + +VL+ACS GDL +G+ +H RI + +
Sbjct: 73 SHVWNGCYQEAISLYHQMLSQ-QIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYS------------NWAASAYGNVAL--WNSM 181
D V+ LL +Y + G L RK+F + + + N L + M
Sbjct: 132 MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191
Query: 182 LSGG------------------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
+S G K H + +KRG E + +SLI MY KCG +
Sbjct: 192 VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSL 251
Query: 218 DDGLALFNFMPERDVVSWTGII------------VGCFEC------------------SC 247
+F + R +WT +I + F SC
Sbjct: 252 RSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSC 311
Query: 248 FTLSALVDMYS----------NCNVLCEARKLFDQYSSWAAS----------AYGNVALW 287
LS L + S + N+ C L + Y++ A +A+W
Sbjct: 312 TNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVW 371
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N++IS Y +E + L + G DS++ S+L A N + LQ+HG +
Sbjct: 372 NTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN--EGELQLGLQIHGHV 429
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + +Y+ S LI++Y++ G V A +F ++ K VV W+ +I G +++G ++ A
Sbjct: 430 IKRPFMDEYVFNS-LINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAI 488
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LF M + ++ + SV++ CS L L +GK +H + G K T+L+DMY
Sbjct: 489 SLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMY 548
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG++ +F M ER VVSW+ +I G +G+ E I F +M++S +KPN++T +
Sbjct: 549 AKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVM 608
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VLSAC HAG V+E F SM+ ++G+EP EH+ C+VDLL +AG D+A ++I MPF
Sbjct: 609 NVLSACSHAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPF 667
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
P +IW ++L C H + I +L +D Y +LSN+YA G W+ +V
Sbjct: 668 PPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEV 727
Query: 648 RKAGKKLGEKK 658
R K G KK
Sbjct: 728 RSMMKGTGLKK 738
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 204/518 (39%), Gaps = 124/518 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+VEA CG+ ++ KS H I+K G+ D F ++L+ MYA SL A +F+ +
Sbjct: 206 VVEA---CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVT 262
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ +WT M+++Y A+ L+ M + VEPN +L++C+ L G+
Sbjct: 263 YRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEVEPNSVTMRIILRSCTNLSLLREGK 321
Query: 126 LIHERITREKLEYD-TVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
+H + + L+ + L TLL++Y L K+ + +A+WN+++
Sbjct: 322 SVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRG------IAVWNTLI 375
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
S G Q+H +KR F
Sbjct: 376 SVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM 435
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------- 244
E V SLI+MY KCG +D +F+ M + VV+W +I G +
Sbjct: 436 DEYV-FNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 245 ---CSCFTLSALVDMYSNCN---------------VLCEARK-------LFDQYS----- 274
C A V + C+ + C RK L D Y+
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDL 554
Query: 275 SWAASAYGN-----VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
A + N V W+S+IS Y ++ Q E I L S + SG+ + T + L AC
Sbjct: 555 QTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSAC 614
Query: 330 IN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ +L FNS + + ++ V ++DL +R G++ A E+ +
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEP-------KREHFV--CIVDLLSRAGDLDEAYEIIKLM 665
Query: 383 P-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
P W L+ GC H +A + R++ N D
Sbjct: 666 PFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTD 703
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 204/748 (27%), Positives = 352/748 (47%), Gaps = 105/748 (14%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ S + G +HC +IK+GL +++ NNLLS+Y + +A KLFDEM+ + + +WT
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M++A+T ++ A+ L+ M+ G+ PN F +S+V+++C+ D+ G +H + +
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGT-HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WA---ASAYGN------VALW 178
E ++V+ ++L D+Y KCG +LF N W +S G + +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 179 NSMLSGG-----------------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+ M+ G K +H+ + RG V TSL+D Y +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 216 EIDDGLALFNFMPERDVVSWTGII------------VGCF--------ECSCFTLSA--- 252
+++D + + N E+DV WT ++ VG F + + FT SA
Sbjct: 274 KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 253 --------------------------------LVDMYSNCNVL-CEARKLFDQYSSWAAS 279
LVDMY C+ EA ++F A
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF------GAM 387
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
NV W ++I G V + ++ LL + + + T + L+AC L + R
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV--RR 445
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
L++H ++ + + +VG++L+D YA V A + + ++D + ++ L+ +
Sbjct: 446 VLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNE 505
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G + +A + M ++Q + + + L +L GK +H + VK GF
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASV 565
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
L SL+DMY KCG ++D +F+ + DVVSW G++ G NG A++ F+EM
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+ +TFL +LSAC + L + F MK Y +EP +EHY +V +LG+AG ++A
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
++ M KP+ I+ ++L+AC N L +A + LA +P DP+ Y++L+++Y G
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESG 745
Query: 640 MWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
+ K R +K KK G S +EV
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTVEV 773
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 7/276 (2%)
Query: 327 KACINLLNF----NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
K+CI +L+F +SR L +H ++ G + + +NL+ LY + + +A +LF +
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
+ V AW+ +I TK + A LF +M+ S N+F SSV++ C+ L + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+VH +K GFE + +SL D+Y KCG+ + LF + D +SWT +I
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ +EA+ ++ EM+++ + PNE TF+ +L A GL E TI +++ G+ ++
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLK 262
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+VD Q +DA +++ + D +W S++
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVV 297
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 220/769 (28%), Positives = 344/769 (44%), Gaps = 128/769 (16%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C + +S+ Q K +H I G L + + +L+ YA F LF++
Sbjct: 58 INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTF 117
Query: 66 R--KNIVSWTTMVTAYTSNKRPNW-AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ + W T++ A++ + YN M+ G V+ + + VLK CS S D+
Sbjct: 118 QNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRG-VQLDDHTFPFVLKLCSDSFDIC 176
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
G +H + + + D + NTLL +Y CG L R+LFD+ +V WN+
Sbjct: 177 KGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPE------RDVVSWNT 230
Query: 181 ML---------------------------------------------SGGKQVHAFCVKR 195
++ +++H + VK
Sbjct: 231 IIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKV 290
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------- 241
G + + T +L+D Y KCG + +FN E++ VSW II G
Sbjct: 291 GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAF 350
Query: 242 --------------------------CF---------------ECSCFTLSALVDMYSNC 260
CF E F ++L+DMY+
Sbjct: 351 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKS 410
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
EA +F N+ WN+MI+ Y LN EAI + + +G C ++
Sbjct: 411 GHSTEASTIFHNLDR------RNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 464
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TFT+ L AC L ++H + V G D V ++LID+YA+ G + SA +F+
Sbjct: 465 TFTNVLPACARLGFLGP--GKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 522
Query: 381 RLPKKDVVAWSGLIMGC--TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
+KD V+++ LI+G T L SL ++ DV F+ V+ C+ LA+L
Sbjct: 523 T-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV--GVISACANLAAL 579
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
++GK+VH ++ SL+D Y KCG ID LF + +DV SW +I+G
Sbjct: 580 KQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGY 639
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
G G + AI+ F+ M ++ + ++++ VLSAC H GLVE W F+ M + LEP
Sbjct: 640 GMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR-LEPT 698
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
HY CMVDLLG+AG ++A +LI ++P PD IW ++L AC + N +L AE L
Sbjct: 699 EMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLF 758
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P+ Y++LSN+YA G WD +K+R+ K G KK G SW+++
Sbjct: 759 ELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQI 807
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ V + C ++KQGK +H ++ L +F N+LL Y ++ A +LF
Sbjct: 562 DVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 621
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+++ K++ SW TM+ Y AI ++ M + +V+ + Y AVL ACS G +
Sbjct: 622 NQILFKDVASWNTMILGYGMIGELETAISMFEAMRD-DTVQYDLVSYIAVLSACSHGGLV 680
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY------SNWAA---- 169
+ G + ++LE + ++D+ + G + KL Q + W A
Sbjct: 681 ERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 740
Query: 170 -SAYGNVAL 177
YGNV L
Sbjct: 741 CRIYGNVEL 749
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFK 481
+I ++L +CS + SL + KQVHA + GF ++L SLI Y K +LF
Sbjct: 55 YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114
Query: 482 --FMPERDVVSWTGIIVG--CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F R W +I NG + + M++ ++ ++ TF VL C
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNG-TFDGFETYNRMVRRGVQLDDHTFPFVLKLC---- 169
Query: 538 LVEEAWTIFTSMKP-----EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
+++ I M+ + G + + ++ L G G +DA +L EMP + D
Sbjct: 170 --SDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVV 226
Query: 593 IWASML 598
W +++
Sbjct: 227 SWNTII 232
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/672 (29%), Positives = 322/672 (47%), Gaps = 86/672 (12%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
R + + + C ++ Q LH + GL + L+ YA + ++FD
Sbjct: 350 RSLTSHKRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTF 406
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ + W ++ Y A+ LY+ M+ + + F++ +VLKACS GDL +G
Sbjct: 407 PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 466
Query: 125 RL---------IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV 175
+ ++ E +E D+V M ++ + + GSL +
Sbjct: 467 GKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGR------------ 514
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
+ G+ VH F ++R + PE D
Sbjct: 515 ------VKEGRSVHGFVIRRAMD-----------------------------PELD---- 535
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
F AL+++Y++ L + K+F+ + WN++IS +
Sbjct: 536 ------------FLGPALMELYADTGNLRDCHKVFETIKE------KTILSWNTLISIFT 577
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N Q EEA+ L + + G+ DSY+ S+L AC ++F S+ Q+HG I+ +G D
Sbjct: 578 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSAC-GTISF-SQLGAQIHGYIIKTGNFND 635
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
++ + LID+YA+ G V SA ++F ++ +K +V W+ +I G +++G + A LF M
Sbjct: 636 FVQNA-LIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYM 694
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ +++ SV++ CS L L +GK VH + G K+ T+L DMY KCGE+
Sbjct: 695 NCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQM 754
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M ER +VSW+ +I G G +G+ I+ F +M+ S +KPN+ITF+ +LSAC H
Sbjct: 755 AHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSH 814
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AG VEE F SM E+G+EP +H+ CMVDLL +AG + A Q+I +PF + +IW
Sbjct: 815 AGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWG 873
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L C H ++ I + LL D Y +LSN+YA G WD KVR K G
Sbjct: 874 ALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKG 933
Query: 656 EKK-AGMSWIEV 666
+K G S IE+
Sbjct: 934 LRKVPGYSTIEI 945
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + ++ C +++GK +H ++I YGL +D + L MY+ L AH +
Sbjct: 699 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 758
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M+ ++IVSW+ M+ Y + + N I L+N ML G ++PN + +L ACS +G
Sbjct: 759 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG-IKPNDITFMHILSACSHAGA 817
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
++ G+L ++ +E ++D+ + G L Y + + N ++W
Sbjct: 818 VEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLN----GAYQIITSLPFPANSSIWG 873
Query: 180 SMLSG 184
++L+G
Sbjct: 874 ALLNG 878
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 271/486 (55%), Gaps = 24/486 (4%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GGKQVH+ + G K+ L++ Y K G+ L LF+ MP R+V+S+ +I G
Sbjct: 78 LFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILING 137
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ L D+ S A+KLFD+ S N+A WN+MI+G E N+
Sbjct: 138 YLQ--------LGDLES-------AQKLFDEMSER------NIATWNAMIAGLTQFEFNK 176
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A++L ++ G D +T S L+ C L + + +VH ++ G+EL +VGS+
Sbjct: 177 QALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLA--GQEVHACLLKCGFELSSVVGSS 234
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L +Y + G++ +L +P + VVAW+ LI G ++G + M + +
Sbjct: 235 LAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPD 294
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ SVL CS LA+L +G+Q+HA +K G ++SLI MY + G ++D + F
Sbjct: 295 KITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFV 354
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
DVV W+ +I G +GR +EA+ F +M +++ NE+TFL +L AC H+GL E+
Sbjct: 355 DRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEK 414
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F M +Y L+P +EHY C+VDLLG+AG ++AE +I MP +PD IW ++L AC
Sbjct: 415 GTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAAC 474
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAG 660
+ H ++ I+E+++ P D + YV+LSN++A+ W ++S++RKA + K+ G
Sbjct: 475 KLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPG 534
Query: 661 MSWIEV 666
+SW+E+
Sbjct: 535 ISWLEL 540
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 177/494 (35%), Gaps = 141/494 (28%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL---------- 156
++S +L++C G L G+ +H I D + N LL+ Y K G
Sbjct: 64 LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123
Query: 157 -----------------------TRKLFDQYSNWAASAYGNVALWNSMLSG--------- 184
+KLFD+ S N+A WN+M++G
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSER------NIATWNAMIAGLTQFEFNKQ 177
Query: 185 -----------------------------------GKQVHAFCVKRGFEKEDVTLTSLID 209
G++VHA +K GFE V +SL
Sbjct: 178 ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 237
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY+K G + DG L MP R VV+W +I G + C
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGC---------------------- 275
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
EE + + + +G D TF S L AC
Sbjct: 276 ------------------------------PEEVLNQYNMMKMAGFRPDKITFVSVLSAC 305
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L Q+H ++ +G V S+LI +Y+R G ++ +++ F DVV
Sbjct: 306 SELATLGQ--GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
WS +I HG A LF M + + N+ S+L CS +G + V
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423
Query: 450 KRGFEKEDIT-LTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
K+ K I T ++D+ + G +++ + + MP + D + W ++ C + A+ A
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483
Query: 508 IAYFQEMIQSRLKP 521
+E+I +L P
Sbjct: 484 ERISEEII--KLDP 495
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 187/452 (41%), Gaps = 76/452 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + S+ GK +H II G S+D F N+LL+ Y+ + LF M R+N+
Sbjct: 69 LQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNV 128
Query: 70 VS-------------------------------WTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+S W M+ T + A+ L+ M
Sbjct: 129 MSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGL 188
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G + P+ F +VL+ C+ L G+ +H + + E +V+ ++L MY+K GSL+
Sbjct: 189 GFL-PDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS- 246
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVKR--GFEKEDVTLTSLID 209
D + V WN++++G Q ++ + + + GF + +T S++
Sbjct: 247 ---DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ + G + + + S ++ S+L+ MYS L ++ K
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVV-----------SSLISMYSRSGCLEDSIKA 352
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F ++ +V LW+SMI+ Y + + EEA+ L + M + TF S L AC
Sbjct: 353 FVDRENF------DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYAC 406
Query: 330 INLLNFNSRFALQVHGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP 383
S L+ G ++ Y+L + + ++DL R G ++ A + +P
Sbjct: 407 -------SHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMP 459
Query: 384 -KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ D + W L+ C H +A + ++I
Sbjct: 460 VQPDGIIWKTLLAACKLHKEAEMAERISEEII 491
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 87/248 (35%), Gaps = 76/248 (30%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ S +L+ C L SL GKQVH+ + G K+ L++ Y K G+ L LF M
Sbjct: 64 LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123
Query: 484 P-------------------------------ERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
P ER++ +W +I G Q K+A++ F+
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFK 183
Query: 513 EMIQSRLKPNEITFLGVLSACRH-----AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
EM P+E T VL C AG A + + + L H Y
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYI--- 240
Query: 568 LLGQAGCFDDAEQLIAEMP----------------------------------FKPDKTI 593
++G D E+LI MP F+PDK
Sbjct: 241 ---KSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 297
Query: 594 WASMLKAC 601
+ S+L AC
Sbjct: 298 FVSVLSAC 305
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C + ++ QG+ +H +IK G S + ++L+SMY+ L D+ K F +
Sbjct: 298 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 357
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
++V W++M+ AY + R A+ L+ H +E +E N + ++L ACS SG
Sbjct: 358 NFDVVLWSSMIAAYGFHGRGEEALELF-HQMEDLKMEANEVTFLSLLYACSHSG 410
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 274/521 (52%), Gaps = 57/521 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
GGK VH GF++ + + LI MY +CG + +F+ M R++ SW ++
Sbjct: 78 FKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLA 137
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y+ + ARKLFD+ +V WN+++ Y
Sbjct: 138 G---------------YAKLGDVNNARKLFDRMME------KDVVSWNTIVLAYAKQGCF 176
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI L M ++++F L C+ L + A QVHG ++ +G+ + ++ S
Sbjct: 177 NEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL--QLAKQVHGQVLVAGFLSNLVLSS 234
Query: 361 NLIDLYARLGNVK-------------------------------SALELFHRLPKKDVVA 389
+++D YA+ G ++ SA ELFH++P+K+ V+
Sbjct: 235 SIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVS 294
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
WS LI G ++ L A F M+ + Q+ SS L C+ +A+L+ GKQVH + +
Sbjct: 295 WSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLI 354
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAI 508
+ F I ++SLIDMY KCG ++ +F M ++DVV W +I QNG ++A+
Sbjct: 355 RTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAM 414
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M++S LKP+ ITF+ +LSAC H+GLV+E F +M ++G+ P EHY C++DL
Sbjct: 415 QMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDL 474
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF + + M KPD +W+++L C HNN +L +AE+++ P+ + Y
Sbjct: 475 LGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAY 534
Query: 629 VMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
V L+++YA LG W+S+ KVR+ +K K+ G+SWI+V +
Sbjct: 535 VSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGN 575
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 185/439 (42%), Gaps = 100/439 (22%)
Query: 22 GKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ + R + +S +++++ N++L+ YA +N+A KLFD M K++VSW T+V AY
Sbjct: 112 GRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYA 171
Query: 81 SNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
N AI LY L+ G N F ++ VL C +L L + +H ++
Sbjct: 172 KQGCFNEAIGLYRDFRRLDMGF---NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLS 228
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
+ VL ++++D Y KCG + R LFD+ ML K +HA+
Sbjct: 229 NLVLSSSIVDAYAKCGEMRCARTLFDE-----------------MLV--KDIHAW----- 264
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------- 241
T+++ Y K G+++ LF+ MPE++ VSW+ +I G
Sbjct: 265 --------TTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFT 316
Query: 242 ----------------CFECSCFTLSA----------LVDMYSNCNVLCEARKLFDQYSS 275
C C+C +++A L+ Y CN + L D YS
Sbjct: 317 KMMKFGINPEQYTFSSCL-CACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSK 374
Query: 276 WAA--------SAYGN---VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
GN V +WN+MIS N E+A+ + + + SG+ D TF
Sbjct: 375 CGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIV 434
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG-NVKSALELFHR 381
L AC + L+ RF + G D S LIDL R G V+ EL +
Sbjct: 435 ILSACSHSGLVQEGLRF---FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENM 491
Query: 382 LPKKDVVAWSGLIMGCTKH 400
K D WS L+ C H
Sbjct: 492 SCKPDDRVWSALLGVCRIH 510
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 48/257 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + ++ K +H +++ G ++ ++++ YA + A LFDEM K+I +W
Sbjct: 205 CVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAW 264
Query: 73 TTMVTAYT---------------SNKRP-NW---------------AIRLYNHMLEYGSV 101
TT+V+ Y K P +W A+ + M+++G +
Sbjct: 265 TTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG-I 323
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
P + +S+ L AC+ L G+ +H + R +T+++++L+DMY KCG L
Sbjct: 324 NPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCC 383
Query: 160 LFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLIDM 210
+F N +V +WN+M+S G K + F V+ G + + +T ++
Sbjct: 384 VFHLMGN-----KQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSA 438
Query: 211 YLKCGEIDDGLALFNFM 227
G + +GL F M
Sbjct: 439 CSHSGLVQEGLRFFKAM 455
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 202/711 (28%), Positives = 333/711 (46%), Gaps = 84/711 (11%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM--ARKNIVSW 72
Q +S+ + +H +++ GL D +++SMY F S A + + + + W
Sbjct: 38 QCKSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWW 94
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ ++LY M G P+ + + VLKAC G +H +
Sbjct: 95 NQLIRRSVHLGFLEDVLQLYRRMQRLG-WRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------- 182
E++ + N L+ MY +CG+ R++FD+ G++ WNS++
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRE---RGVGDLVSWNSIVAAYMQGGD 210
Query: 183 -------------------------------------SGGKQVHAFCVKRGFEKEDVTLT 205
S GKQVH + ++ G ++
Sbjct: 211 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 270
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+++DMY KCG +++ +F M +DVVSW ++ G YS +
Sbjct: 271 AVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG---------------YSQIGRFDD 315
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A LF++ NV W+++I+GY EA+ + + G + T S
Sbjct: 316 ALGLFEKIREEKIEL--NVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSL 373
Query: 326 LKACI---NLLNFNSRFALQVHGLIVTSGYEL--DYIVGSNLIDLYARLGNVKSALELFH 380
L C LL+ + ++ + D +V + LID+Y++ + K+A +F
Sbjct: 374 LSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFD 433
Query: 381 RLPKKD--VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLA 436
+P KD VV W+ LI G +HG + A LF M+ + V N F IS L C+ L
Sbjct: 434 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 493
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+LR G+Q+HA+ ++ FE + + + LIDMY K G++D +F M +R+ VSWT ++
Sbjct: 494 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLM 553
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G +GR +EA+ F EM + L P+ +TF+ VL AC H+G+V++ F M ++G+
Sbjct: 554 TGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGV 613
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P EHY CMVDLL +AG D+A +LI MP KP +W ++L AC + N +L A
Sbjct: 614 VPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAAN 673
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
QLL + Y +LSN+YA W ++++R K G +K+ G SW++
Sbjct: 674 QLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 724
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 70/543 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ CG+ S + G S+H + G ++F GN L+SMY + +A ++FDEM +
Sbjct: 133 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 192
Query: 68 -NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++VSW ++V AY A++++ M E + P+ VL AC+ G G+
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H R L D + N ++DMY KCG + K+F++ +V WN+M++G
Sbjct: 253 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK------VKDVVSWNAMVTG 306
Query: 185 GKQVHAFCVKRG-FEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFM----PERD 231
Q+ F G FEK VT +++I Y + G + L +F M E +
Sbjct: 307 YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPN 366
Query: 232 VVSWTGIIVGCF---------ECSC------------------FTLSALVDMYSNCNVLC 264
VV+ ++ GC E C ++AL+DMYS C
Sbjct: 367 VVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 426
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTF 322
AR +FD S V W +I G + + EA+ L S + + +++T
Sbjct: 427 AARAMFDLIPPKDRS----VVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 482
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHR 381
+ AL AC L RF Q+H ++ + +E + +N LID+Y++ G+V +A +F
Sbjct: 483 SCALMACARLGAL--RFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 540
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +++ V+W+ L+ G HG A +F +M + VL CS + +G
Sbjct: 541 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
Query: 442 KQV-----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGII 495
F V G E ++D+ + G +D+ + L + MP + + W ++
Sbjct: 601 INYFNGMNKDFGVVPGAEH----YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALL 656
Query: 496 VGC 498
C
Sbjct: 657 SAC 659
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 187/489 (38%), Gaps = 152/489 (31%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C + +GK +H ++ GL +D+F GN ++ MYA + +A+K+F
Sbjct: 230 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 289
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE---------YGSV----------- 101
+ M K++VSW MVT Y+ R + A+ L+ + E + +V
Sbjct: 290 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 349
Query: 102 --------------EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT------- 140
EPN ++L C+L+G L G+ H + L D
Sbjct: 350 EALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDL 409
Query: 141 VLMNTLLDMYVKCGS--LTRKLFD-------QYSNWAASAYGN---------VALWNSML 182
+++N L+DMY KC S R +FD W GN + L++ ML
Sbjct: 410 MVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML 469
Query: 183 SG--------------------------GKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCG 215
G+Q+HA+ ++ FE + + + LIDMY K G
Sbjct: 470 QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSG 529
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
++D +F+ M +R+ VSWT ++ G
Sbjct: 530 DVDAARVVFDNMHQRNGVSWTSLMTG---------------------------------- 555
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
Y ++ + EEA+ + + G+ D TF L AC
Sbjct: 556 ------------------YGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYAC------ 591
Query: 336 NSRFALQVHGLIVTSGYELDY--IVGSN----LIDLYARLGNVKSALELFHRLPKKDVVA 389
S + G+ +G D+ + G+ ++DL +R G + A+EL +P K A
Sbjct: 592 -SHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPA 650
Query: 390 -WSGLIMGC 397
W L+ C
Sbjct: 651 VWVALLSAC 659
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLS-------QDIFTGNNLLSMYADFTSLNDAH 58
+V L C ++ GK HC IK+ L+ D+ N L+ MY+ S A
Sbjct: 370 LVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 429
Query: 59 KLFDEMARKN--IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKAC 115
+FD + K+ +V+WT ++ + N A+ L++ ML+ + V PN F S L AC
Sbjct: 430 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 489
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
+ G L GR IH + R + E + + N L+DMY K G + R +FD
Sbjct: 490 ARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ------ 543
Query: 173 GNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
N W S+++G G+ A + K G + VT ++ G +D G+
Sbjct: 544 RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINY 603
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF------DQYSSWA 277
FN M +D G++ G +C +VD+ S L EA +L + W
Sbjct: 604 FNGM-NKDF----GVVPGAEHYAC-----MVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 653
Query: 278 A-----SAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMC 316
A Y NV L + + L N+ + TLLS+I+++ C
Sbjct: 654 ALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 698
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 209/687 (30%), Positives = 339/687 (49%), Gaps = 73/687 (10%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE--MARKNIVSWTTMVTAYT 80
+ LH I+ G D ++MY+ L DA ++FDE + +I+ W +++ AY
Sbjct: 141 RQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI 200
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ +RL+ M+ G V P Y++V+ AC SG+ G ++H RI + LE T
Sbjct: 201 FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLE-AT 259
Query: 141 VLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQV---------- 188
L N+L+ Y KCG+L +LF++ S +V WN+M++ +Q
Sbjct: 260 NLWNSLVTFYGKCGNLQHASQLFERISR------KDVVSWNAMIAANEQRGEGENALGLF 313
Query: 189 -HAFCVKRGFEKEDVTLTSLIDMY-----LKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
V+ + VT SL+ L+CG + +F E D T I
Sbjct: 314 RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGR-EIHAHIFRLSLEVD----TSIT--- 365
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
++L+ YS C + +AR++F++ ++ WNSM++GY NEQ
Sbjct: 366 --------NSLITFYSKCREVGKAREIFERL------LLRDIISWNSMLAGYEQNEQQGR 411
Query: 303 AITLLSHIHSSGMCIDSYT----FTSALKACINLLNFNSRFALQVHGLI---VTSGYELD 355
+ + SG+ DS++ F +A + L+ F R ++HG I +T G +
Sbjct: 412 CFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYF--RRGKEIHGYILRRITPG-GVS 468
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
V + ++ +YA+ + A ++F + +D +W+ ++ G +++ ++F D++
Sbjct: 469 LSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILK 528
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK----RGFEKEDITLT---SLIDMYL 468
++ +S +L C L SL+ GKQ HA K + +D L+ +LI MY
Sbjct: 529 QGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYS 588
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG I D +F M +DV SWT +I GC +G A EA+ F+ M +KPN++TFL
Sbjct: 589 KCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLA 648
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI--AEMP 586
+L AC H GLV+E F SM +YGL P +EHY CM+DL G++G FD A+ L+
Sbjct: 649 LLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITL 708
Query: 587 FKPDK----TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
FKP +W +L AC L A ++L PED + Y++L+N+YA+ G+W+
Sbjct: 709 FKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWE 768
Query: 643 SLSKVRKAGKKLG-EKKAGMSWIEVSS 668
KVRKA + G K+ G SWI+ +
Sbjct: 769 DAIKVRKAMRDKGLRKEVGCSWIDTGN 795
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/572 (24%), Positives = 257/572 (44%), Gaps = 62/572 (10%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG K G +H RIIK GL N+L++ Y +L A +LF+ ++RK++VSW
Sbjct: 235 CGSSGEEKYGAMVHGRIIKAGLEATNLW-NSLVTFYGKCGNLQHASQLFERISRKDVVSW 293
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEY-GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
M+ A A+ L+ ML+ V+PN + ++L A S L GR IH I
Sbjct: 294 NAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHI 353
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
R LE DT + N+L+ Y KC + R++F++ ++ WNSML+G +Q
Sbjct: 354 FRLSLEVDTSITNSLITFYSKCREVGKAREIFERL------LLRDIISWNSMLAGYEQNE 407
Query: 188 -------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ + G E + +LT + + + D L F +++ + +
Sbjct: 408 QQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR-----DSSGLIYFRRGKEIHGYILRRI 462
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLF------DQYSSWAASAYGNVALWNSMISGY 294
S +A++ MY+ N + +A K+F D YS WN+M+ GY
Sbjct: 463 TPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYS------------WNAMMDGY 510
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT--SGY 352
N + E+ + + I G +D + + L +C L++ + Q H ++ +G
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSL--QLGKQFHAVVAKLFNGQ 568
Query: 353 ELDY-----IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + + + LI +Y++ G++K A ++F ++ +KDV +W+ +I GC HGL A
Sbjct: 569 DCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEAL 628
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDM 466
LF M NQ ++L C+ ++ G + G +ID+
Sbjct: 629 QLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDL 688
Query: 467 YLKCGEIDD-------GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+ + G+ D G+ LFK + + W ++ C + + + ++++ L
Sbjct: 689 FGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILE--L 746
Query: 520 KP-NEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+P +E T++ + + +GL E+A + +M+
Sbjct: 747 EPEDEATYILLANLYASSGLWEDAIKVRKAMR 778
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 209/451 (46%), Gaps = 57/451 (12%)
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD------TVLMN 144
L N LE+ + +GF + + CS + + HER+ + +D + +
Sbjct: 35 LRNKQLEF---QNHGFSSQFIFR-CSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWS 90
Query: 145 TLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTL 204
L+ Y +CG+ A A+G L+ M+ G Q + F +L
Sbjct: 91 ALIAAYSRCGNF------------AQAFG---LFQKMMGEGLQPNGF-----------SL 124
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
SL+ + GEI GL R + W+ I F +A + MYS C VL
Sbjct: 125 ASLLKVSCSTGEI--GLC-------RQLHGWS--IRTGFGLDSGIRAAWITMYSRCGVLE 173
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS-YTFT 323
+A+++FD+ S A ++ LWNS+I+ Y+ + E + L + S G+ + T+
Sbjct: 174 DAQRVFDETSLLAL----DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYA 229
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S + AC + + ++ VHG I+ +G E + S L+ Y + GN++ A +LF R+
Sbjct: 230 SVVNACGS--SGEEKYGAMVHGRIIKAGLEATNLWNS-LVTFYGKCGNLQHASQLFERIS 286
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRG 441
+KDVV+W+ +I + G A LFR M+ V N+ S+L S L++LR G
Sbjct: 287 RKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCG 346
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+++HA + E + SLI Y KC E+ +F+ + RD++SW ++ G QN
Sbjct: 347 REIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQN 406
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ F+ M+ S ++P+ + + +A
Sbjct: 407 EQQGRCFDIFKRMMLSGIEPDSHSLTIIFNA 437
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+K A +LF P +DV++WS LI ++ G + A+ LF+ M+ N F ++S+LKV
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF--KFMPERDVV 489
+ +Q+H + ++ GF + + I MY +CG ++D +F + D++
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
W II +G E + F +M+ + P E+T+ V++AC +G EE +
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSG--EEKYGAMVH 248
Query: 549 MK-PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ + GLE + +V G+ G A QL + K D W +M+ A E
Sbjct: 249 GRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRK-DVVSWNAMIAANEQRGEG 306
Query: 608 K-LVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ + + L P P++ LS + A G+
Sbjct: 307 ENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGL 340
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQD-------IFTGNNLLSMYADFTSLNDAHKLFD 62
L CG+ S++ GK H + K QD + N L+SMY+ S+ DA ++F
Sbjct: 542 LTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFL 601
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+M RK++ SWT M+T + A++L+ M G ++PN + A+L AC+ G +
Sbjct: 602 KMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG-IKPNQVTFLALLMACAHGGLVQ 660
Query: 123 LG 124
G
Sbjct: 661 EG 662
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 338/684 (49%), Gaps = 51/684 (7%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSL--NDAHKLFD 62
+ +E LR + R G++LH +K G S N+L++ Y+ F L A +F
Sbjct: 17 QFIEHLRRASRPR---DGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFA 73
Query: 63 EM--ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
++ A +++ SW +++ S+ RP A+ + ML ++ P+ ++A A + +
Sbjct: 74 DIPAAARDVASWNSLLNPL-SHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHS 132
Query: 121 LDLGRLIHERITREKLEYDTVLMNT-LLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
G ++H + V ++T LL+MY K G + + +FD+ + N
Sbjct: 133 ASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMP------HRNEVS 186
Query: 178 WNSMLSGGKQVHAFCVKRGFE------------KEDVTLTSLIDMYLKCGEIDDGLALFN 225
W +M++G C + FE K + T+++ + G+ +
Sbjct: 187 WAAMVAGYAARK--CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHG 244
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
+ + +V + + ++LV MY+ + A +F+ +S N
Sbjct: 245 LVVKDGMVGFVSV-----------ENSLVTMYAKAGCMDAAFHVFE------SSKERNSI 287
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
W++MI+GY N E A+ + S +H++G +T L AC ++ Q HG
Sbjct: 288 TWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLME--GKQAHG 345
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L+V G+E+ V S L+D+YA+ G + A E F++ + D+V W+ ++ G ++G
Sbjct: 346 LMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQ 405
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A +L+ M N I+S+L+ C+ LA+L GKQ+H +K GF ++L
Sbjct: 406 ALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALST 465
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG ++DG+ +F+ MP RDV++W II G QNGR +AI F+EM P+ +T
Sbjct: 466 MYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVT 525
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+ VL AC H GLV+ WT F SM +YGL P L+HY CMVD+L +AG +A+ I +
Sbjct: 526 FINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESI 585
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
+W +L AC + + + + E+L+ D + Y++LSN+YA W+ +
Sbjct: 586 TIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVE 645
Query: 646 KVRKAGKKLG-EKKAGMSWIEVSS 668
+VR K +G K G SW+E++S
Sbjct: 646 RVRYLMKLVGVSKDPGCSWVELNS 669
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 220/691 (31%), Positives = 340/691 (49%), Gaps = 63/691 (9%)
Query: 6 IVEALRHCGQRR--SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ A R CG R + G+ +H K GL D F GN+L+SMY + DA K+F
Sbjct: 69 LPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGG 128
Query: 64 M--ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA----VLKACSL 117
+ A +NIVSW ++ A + + P + L+ L V G + A VL C+
Sbjct: 129 IPDAARNIVSWNALMAALSGD--PRRGLELFRDCL----VAVGGMVDEATLVTVLPMCAA 182
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
G + GR +H + + + N L+DMY KCG L + A +V
Sbjct: 183 LGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELAD------AERAFPEAPSVVS 236
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLK-CGEID-DGLALFNFMPE------ 229
WN ML A+ R + L DM +K G + D + + + +P
Sbjct: 237 WNVMLG------AYTRNR---EAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTE 287
Query: 230 ----RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
R++ ++T + G S +ALV Y C L A ++F V+
Sbjct: 288 LSRLRELHAFT-VRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRR------KTVS 340
Query: 286 LWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACIN---LLNFNSRFAL 341
WN++IS + + AI L + ++ G+ D ++ S L AC + LL+ +
Sbjct: 341 SWNTLISAHA-QQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKA---- 395
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS-ALELFHRLPKKDVVAWSGLIMGCTKH 400
HG I+ +G E D ++ ++L+ Y R + A LF + +K V W +I G +++
Sbjct: 396 -THGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQN 454
Query: 401 GLNSLAYLLFRDMINSNQDVNQFI-ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
GL + LFR+M + + I +S L CS L+S+R GK++H F +K +
Sbjct: 455 GLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFL 514
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDV-VSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+SLIDMY KCG ++D F + RD VSWT +I G NG +EA+ + +M +
Sbjct: 515 SSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREG 574
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMK-PEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P+E T+LG+L AC HAG++EE F M+ + +E LEHY C++ +L +AG F D
Sbjct: 575 MEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFAD 634
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A L+AEMP +PD I +S+L AC H +L S +AE+LL P+ YV+ SN+YA
Sbjct: 635 AVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAG 694
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
WD + KVRK + G K+ G SWI+V+
Sbjct: 695 SRRWDDMRKVRKMLRDAGIAKEPGCSWIDVA 725
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 232/543 (42%), Gaps = 49/543 (9%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C + G+++H K G GN L+ MYA L DA +
Sbjct: 168 VDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERA 227
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML--EYGSVEPNGFMYSAVLKACSLS 118
F E ++VSW M+ AYT N+ A L M E+GSV + +VL ACS
Sbjct: 228 FPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGP 285
Query: 119 GDLDLGRLIHERITREKLEYDT-VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV 175
+L R +H R L+ + + N L+ Y +CG L ++F V
Sbjct: 286 TELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRR------KTV 339
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM-----PER 230
+ WN+++S Q + + I M CG DG ++ + + P+
Sbjct: 340 SSWNTLISAHAQ----------QNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKH 389
Query: 231 --DVVSWTGIIV-GCFECSCFTLSALVDMYSNCN-VLCEARKLFDQYSSWAASAYGNVAL 286
V + G I+ E ++L+ Y C+ AR LFD A G V L
Sbjct: 390 LLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFD-----AMEEKGEV-L 443
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
W +MISGY N E++ L + S G C + TSAL AC L + R ++H
Sbjct: 444 WIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSV--RLGKEMHC 501
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV-VAWSGLIMGCTKHGLNS 404
+ + D + S+LID+Y++ G V+ A F RL +D V+W+ +I G +GL
Sbjct: 502 FALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGR 561
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL---T 461
A L+ M + ++F +L C L G + ++ K ++ L +
Sbjct: 562 EAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDE-MRNHHHKIEVKLEHYS 620
Query: 462 SLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+I M + G D +AL MP E D + ++ C +G A+ + +++ L+
Sbjct: 621 CVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLE--LE 678
Query: 521 PNE 523
P++
Sbjct: 679 PDK 681
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 16/231 (6%)
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S G+ D +T A ++C L + QVH L G D VG++L+ +Y R G
Sbjct: 59 SEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGR 118
Query: 372 VKSALELFHRLPK--KDVVAWSGLIM---GCTKHGLNSLAYLLFRD-MINSNQDVNQFII 425
V+ A ++F +P +++V+W+ L+ G + GL LFRD ++ V++ +
Sbjct: 119 VEDAEKVFGGIPDAARNIVSWNALMAALSGDPRRGLE-----LFRDCLVAVGGMVDEATL 173
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+VL +C+ L G+ VH K G++ +L+DMY KCGE+ D F P
Sbjct: 174 VTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP- 232
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMI---QSRLKPNEITFLGVLSAC 533
VVSW ++ +N A A ++M + +EIT L VL AC
Sbjct: 233 -SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPAC 282
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 338/679 (49%), Gaps = 58/679 (8%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R V+ L C +++ +++GK++H ++++ G ++ N+L+++YA S+ A +F+
Sbjct: 11 RSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFES 70
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWA--IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ K++VSW ++ Y+ ++ + L+ M ++ PNG +S V A S S +
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTL-PNGHTFSGVFTAASSSPET 129
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
G H + YD + ++L++MY K G + RK+FD N W
Sbjct: 130 FGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER------NTVSWA 183
Query: 180 SMLSGGKQVHAFCVKR-GFEKEDVTLTSLIDMYLKCGEIDDGL--ALFNFMPERDVVSWT 236
+++SG + ++R FE ++ L M + G D + ++ + + D+V +
Sbjct: 184 TIISG------YAMERMAFEAWELFLL----MRREEGAHDKFIYTSVLSALTVPDLVHY- 232
Query: 237 GIIVGCFECSCFTLS------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
G + C LS ALV MY C L +A K F+ S + W++M
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFE------LSGDKDDITWSAM 286
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+GY + EA+ L ++H +G +TF + AC ++ Q+HG + +
Sbjct: 287 ITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEE--GKQIHGYSLKA 344
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GYE L A+ G++ A + F L + D+V W+ M +
Sbjct: 345 GYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSCRMQ------------ME 392
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R M ++ ++SVL+ CS LA+L +GKQ+HA +K GF E ++L MY KC
Sbjct: 393 RIM------PHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKC 446
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G ++DG +F+ MP RD+++W +I G QNG +A+ F+E+ KP+ +TF+ VL
Sbjct: 447 GSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVL 506
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
SAC H GLVE F M E+G+ P +EHY CMVD+L +AG + ++ I
Sbjct: 507 SACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHG 566
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W +L AC + N +L + E+L+ ++ S Y++LS++Y LG D + +VR+
Sbjct: 567 MCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRL 626
Query: 651 GKKLG-EKKAGMSWIEVSS 668
K G K+ G SWIE+ S
Sbjct: 627 MKLRGVNKEPGCSWIELKS 645
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 261/493 (52%), Gaps = 37/493 (7%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQVHA +K G E TSLI+MY + GE+ + +F+ RD VS+T +I G
Sbjct: 147 GKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG--- 203
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ L EAR+LFD+ +V WN+MISGY + + EEA+
Sbjct: 204 ------------YASKGFLDEARELFDEI------PVRDVVSWNAMISGYAQSGRVEEAM 245
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN--- 361
+ + + + T S L AC S +LQ+ G V S E D +GSN
Sbjct: 246 AFFEEMRRAKVTPNVSTMLSVLSACAQ-----SGSSLQL-GNWVRSWIE-DRGLGSNIRL 298
Query: 362 ---LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
LID+Y + G+++ A LF ++ K+VV+W+ +I G T A LFR M+ SN
Sbjct: 299 VNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNI 358
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVK--RGFEKEDITLTSLIDMYLKCGEIDDG 476
D N S+L C+ L +L GK VHA+ K + + TSLIDMY KCG++
Sbjct: 359 DPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVA 418
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F M + + +W +I G +G A+ F M P++ITF+GVL+AC+HA
Sbjct: 419 KRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHA 478
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL+ F+SM +Y + P L HY CM+DL G+AG FD+AE L+ M KPD IW S
Sbjct: 479 GLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCS 538
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLG 655
+L AC H +L +A+ L PE+PS YV+LSN+YA G W+ ++K+R +
Sbjct: 539 LLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRM 598
Query: 656 EKKAGMSWIEVSS 668
+K G S IEV S
Sbjct: 599 KKVPGCSSIEVDS 611
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 191/451 (42%), Gaps = 87/451 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD------------------- 50
+ C + R +GK +H ++K GL + F +L++MYA
Sbjct: 135 FKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDA 194
Query: 51 --FTS----------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
FT+ L++A +LFDE+ +++VSW M++ Y + R A+ + M
Sbjct: 195 VSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM-RR 253
Query: 99 GSVEPNGFMYSAVLKACSLSG-DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT 157
V PN +VL AC+ SG L LG + I L + L+N L+DMYVKCG L
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLE 313
Query: 158 R--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----------EKEDVTL 204
LF++ + NV WN M+ G H C K + DVT
Sbjct: 314 EASNLFEKIQD------KNVVSWNVMIGG--YTHMSCYKEALGLFRRMMQSNIDPNDVTF 365
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
S++ G +D G + ++ ++++ S + ++L+DMY+ C L
Sbjct: 366 LSILPACANLGALDLGKWVHAYV-DKNMKSMKNTVA--------LWTSLIDMYAKCGDLA 416
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
A+++FD ++ ++A WN+MISG+ ++ + A+ L S + S G D TF
Sbjct: 417 VAKRIFDCMNT------KSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVG 470
Query: 325 ALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSAL 376
L AC LL+ R+ S DY V L IDL+ R G A
Sbjct: 471 VLTACKHAGLLSLGRRY---------FSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAE 521
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
L + K D W L+ C H LA
Sbjct: 522 TLVKNMEMKPDGAIWCSLLGACRIHRRIELA 552
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYA--RLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q+H I+ +G + S LI+ A G++ AL LF + + V W+ +I G +
Sbjct: 46 QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
LA + MI+S + N++ S+ K C+ + GKQVHA +K G E
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165
Query: 460 LTSLIDMYLKCGE-------------------------------IDDGLALFKFMPERDV 488
TSLI+MY + GE +D+ LF +P RDV
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
VSW +I G Q+GR +EA+A+F+EM ++++ PN T L VLSAC +G + S
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+ GL ++ ++D+ + G ++A L ++ K
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 202/724 (27%), Positives = 326/724 (45%), Gaps = 132/724 (18%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSM---YADFTSLNDAHKLF 61
R L+ C R+SI K +H I GL ++ + L S+ YA F A KLF
Sbjct: 20 RYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLF 79
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DE+ ++ SW N IR+Y
Sbjct: 80 DELRNPSLFSW-------------NAMIRMY----------------------------- 97
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS-NWAASAYGNVALWNS 180
T L YD L ++V+ + R+ D Y+ + A G+ L
Sbjct: 98 ----------TNSGLSYDA------LGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G +HA V GF+ + SL+ MY+ CGE++ +F+ M ER +VSW +I
Sbjct: 142 ----GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMIN 197
Query: 241 GCF--------------------ECSCFTL------------------------------ 250
G F E C T+
Sbjct: 198 GYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGE 257
Query: 251 -----SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
++L+DMY+ C + EA+ +F + +V W +M++GY+LN A+
Sbjct: 258 DISVWNSLLDMYAKCGNMDEAQMIFYEMDK------RDVVSWTTMMNGYILNGDARSALL 311
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + + T S L AC +L ++ + +HG + E + IV + LID+
Sbjct: 312 LCQMMQFESVKPNFVTLASVLSACASL--YSLKHGRCLHGWAIRQKLESEVIVETALIDM 369
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
YA+ NV + +F + K+ W+ +I GC +GL+ A LF+ M+ D N +
Sbjct: 370 YAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATL 429
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
+S+L + L L++ + +H + ++ GF T LID+Y KCG ++ +F +P
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489
Query: 485 -ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
++D+++W+ II G G +G + AI+ F +M+QS +KPNEITF +L AC HAGLV+E
Sbjct: 490 KDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGL 549
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+F M + + +HY C++DLLG+AG ++A +LI M F+P+ +W ++L +C
Sbjct: 550 GLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVI 609
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMS 662
H N +L + A+ L P + YV+L+N+Y+ +G W VR +G K S
Sbjct: 610 HENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHS 669
Query: 663 WIEV 666
IEV
Sbjct: 670 LIEV 673
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 185/454 (40%), Gaps = 121/454 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C + ++ G+ +H + L +DI N+LL MYA ++++A +F
Sbjct: 223 DCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIF 282
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM ++++VSWTTM+ Y N A+ L M+++ SV+PN ++VL AC+ L
Sbjct: 283 YEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSL 341
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYG- 173
GR +H R+KLE + ++ L+DMY KC +L+ ++F + S W A G
Sbjct: 342 KHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGC 401
Query: 174 -----------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKED 201
N A NS+L + +H + ++ GF
Sbjct: 402 IHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI 461
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMP--ERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
T LID+Y KCG ++ +FN +P ++D+++W+ II G
Sbjct: 462 EVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG------------------ 503
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
Y ++ E AI+L + SG+ +
Sbjct: 504 ----------------------------------YGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN-----------LIDLYA 367
TFTS L AC H +V G L +++ N +IDL
Sbjct: 530 ITFTSILHAC-------------SHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLG 576
Query: 368 RLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
R G ++ A EL + + + W L+ C H
Sbjct: 577 RAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 212/713 (29%), Positives = 329/713 (46%), Gaps = 77/713 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG+ +++G+ LH R++ G + F N+L++MY+ L A +LF M R+N
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMY-------------------- 108
VSWTT+V+ + N A+ + M G V P +Y
Sbjct: 87 AVSWTTLVSGLSQNLMHADALAAFAAMRRAG-VAPTRLIYETKFHNTLGPKHTLAASHCH 145
Query: 109 ----------------------------SAVLKACSLSGDLDLGRLIHERITRE-KLEYD 139
+++L++C +GDL GRL+H R+
Sbjct: 146 SGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAS 205
Query: 140 TVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKR 195
T L N L+ MY C L L +AA N W +++SG Q A
Sbjct: 206 TFLANHLITMYSHCADLASAL----RLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ V T A S T F+ F S L D
Sbjct: 262 AMRRAGVAPTRFALSSAA-------RAAAALGAPLRARSCTASASVGFDTELFVASNLAD 314
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C +L EA ++FDQ A A W +MI GY N E A+ + G+
Sbjct: 315 MYSKCGLLSEACRVFDQMPQKDAVA------WTAMIDGYAKNGSLEAAVLSFRDMKREGL 368
Query: 316 C-IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
D + F S L A L + + +H + +G+EL+ V + LID+YA+ +V+S
Sbjct: 369 VGADQHVFCSVLSASGGLKD--GWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVES 426
Query: 375 ALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A + P +VV+ + +I G + A +++ ++ + N+F SS++K C+
Sbjct: 427 ASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCA 486
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
A L +G Q+HA +K ++ ++L+DMY KCG I + LF + R ++W
Sbjct: 487 MQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNA 546
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I Q+G +EAI F MI S ++PN I F+ +L+AC HAGLV+E F SMK +
Sbjct: 547 VINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAH 606
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+EP EHY C++D G+AG D+A + I+EMP KP+ W S+L AC + +L +
Sbjct: 607 GIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVA 666
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
A+ L+ P + +V LS +YA+LG W+ + VRK + KK G SW++
Sbjct: 667 AQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 719
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFM 483
++S+L+ C LRRG+ +HA V G L + LI MY C ++ L LF M
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
P R+ VSWT ++ G QN +A+A F M ++ + P + +
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
+++L++C +GDL GRL+H R+ T L N L+ MY C L L +
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASAL----RLF 79
Query: 168 AASAYGNVALWNSMLSGGKQ 187
AA N W +++SG Q
Sbjct: 80 AAMPRRNAVSWTTLVSGLSQ 99
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 265/507 (52%), Gaps = 28/507 (5%)
Query: 174 NVALWNSMLS----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
NV WNS+++ GG V A K + T C I AL + +
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTR---SSFPC-TIKSCSALCDLVSG 1161
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
R +S V FE F SAL+DMYS C L +AR LFD+ NV W S
Sbjct: 1162 R--MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI------PLRNVVSWTS 1213
Query: 290 MISGYVLNEQNEEAITLLSHI--------HSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
MI+GYV NEQ + A+ L + + +DS S L AC +
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG--KGITE 1271
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
VHG +V G++ VG+ L+D YA+ G + ++F + +KD ++W+ +I + G
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 402 LNSLAYLLFRDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
L+ A +F M+ + N +S+VL C+ +LR GK +H +K E
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
TS+IDMY KCG ++ F M E++V SWT ++ G G +GRAKEA+ F +M+++ +K
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PN ITF+ VL+AC HAGLVEE W F +MK +Y +EP +EHY CMVDL G+AGC ++A
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
LI M KPD +W S+L AC H N L I A++L P++ YV+LSN+YA G
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571
Query: 641 WDSLSKVRKAGK-KLGEKKAGMSWIEV 666
W + ++R K + K G S +E+
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVEL 1598
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 176/360 (48%), Gaps = 43/360 (11%)
Query: 267 RKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
RKL YS+ AY + WN +I +N +E+A+ L ++ G+
Sbjct: 63 RKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIA 122
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D +TF +KAC N L+ + VHG ++ G+ D V +NLID Y + G+ + AL
Sbjct: 123 ADKFTFPFVIKACTNFLSID--LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180
Query: 377 ELFHRL-------------------------------PKKDVVAWSGLIMGCTKHGLNSL 405
++F ++ P K+VV+W+ +I G ++
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A LF+ M N N++ + S++K C+ + L G+ +H + +K E T+LID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG I D + +F+ MP + + +W +I G +G +EA+ F EM + +KP+ IT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+GVL AC H V+E FT M YG+ P EHY CM +L ++ D+A + E+
Sbjct: 361 FIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 27/259 (10%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GK VH +K GF + +LID Y KCG L +F M R+VVSWT +I G
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI- 202
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+C L EAR++FD+ S NV W +MI+GY+ N+Q EEA+
Sbjct: 203 --------------SCGDLQEARRIFDEIPS------KNVVSWTAMINGYIRNQQPEEAL 242
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + + YT S +KAC + +H + + E+ +G+ LID
Sbjct: 243 ELFKRMQAENIFPNEYTMVSLIKACTEMGILT--LGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQ 422
+Y++ G++K A+E+F +P+K + W+ +I HGL A LF +M +N D
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 423 FIISSVLKVCSCLASLRRG 441
FI VL C + +++ G
Sbjct: 361 FI--GVLCACVHIKNVKEG 377
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 204/470 (43%), Gaps = 52/470 (11%)
Query: 53 SLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVL 112
S N A + + + N+ SW +++ A+R ++ + + G + P + +
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTI 1149
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAAS 170
K+CS DL GR+ H++ E D + + L+DMY KCG L R LFD+
Sbjct: 1150 KSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI------ 1203
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG-------LAL 223
NV W SM++G Q E+ D L D + E++DG + +
Sbjct: 1204 PLRNVVSWTSMITGYVQN---------EQADNALLLFKDFLEEETEVEDGNNVPLDSVVM 1254
Query: 224 FNFMPERDVVSWTGIIVGC--------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ + VS GI G F+ S + L+D Y+ C ++K+FD
Sbjct: 1255 VSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD---- 1310
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYTFTSALKACINLLN 334
W + WNSMI+ Y + + EA+ + + G+ ++ T ++ L AC +
Sbjct: 1311 WMEEK--DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGA 1368
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
R +H ++ E + VG+++ID+Y + G V+ A + F R+ +K+V +W+ ++
Sbjct: 1369 L--RAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMV 1426
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-----KQVHAFCV 449
G HG A +F M+ + N SVL CS + G H + +
Sbjct: 1427 AGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI 1486
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGC 498
+ G E ++D++ + G +++ L K M + D V W ++ C
Sbjct: 1487 EPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 1532
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 138/304 (45%), Gaps = 41/304 (13%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
N + Q+H I+ SG D ++ LI LY+ G + A+ LF+++ W+ +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
T +GL+ A +L+++M+ ++F V+K C+ S+ GK VH +K GF
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG---CG------------- 499
+ +LID Y KCG L +F+ M R+VVSWT +I G CG
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 500 ---------------QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+N + +EA+ F+ M + PNE T + ++ AC G++
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 545 IFTSMKPEYGLEPHLE-HYY---CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I +Y ++ +E Y ++D+ + G DA ++ MP K T W SM+ +
Sbjct: 279 IH-----DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITS 332
Query: 601 CETH 604
H
Sbjct: 333 LGVH 336
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 66/408 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L++C + ++Q +H +II+ GLS D L+ +Y+ + A LF ++
Sbjct: 34 LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W ++ A T N A+ LY +M+ G + + F + V+KAC+ +DLG+++H
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + D + N L+D Y KCG K+F++ NV W +++SG
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR------VRNVVSWTTVISGLIS 203
Query: 185 -GKQVHAFCVKRGFE----KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SW 235
G A +R F+ K V+ T++I+ Y++ + ++ L LF M ++ +
Sbjct: 204 CGDLQEA---RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTM 260
Query: 236 TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSS 275
+I C E TL +AL+DMYS C + +A ++F+
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
++ WNSMI+ ++ +EA+ L S + + D+ TF L AC+++ N
Sbjct: 321 ------KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 336 NSRFA-----LQVHGLI-VTSGYELDYIVGSNLIDLYARLGNVKSALE 377
A Q +G+ + YE + +LYAR N+ A +
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYEC-------MTELYARSNNLDEAFK 415
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 173/443 (39%), Gaps = 108/443 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + G+ H + +G D+F + L+ MY+ L DA LFDE+ +N+
Sbjct: 1149 IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNV 1208
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEY-------GSVEPNGFMYSAVLKACSLSGDLD 122
VSWT+M+T Y N++ + A+ L+ LE +V + + +VL ACS
Sbjct: 1209 VSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 1268
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFD------------QYSNWA 168
+ +H + ++ + + NTL+D Y KCG +++K+FD + +A
Sbjct: 1269 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 1328
Query: 169 ASAYGNVAL-------------WNSM--------------LSGGKQVHAFCVKRGFEKED 201
S AL +N++ L GK +H +K E
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 1388
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
TS+IDMY KCG ++ F+ M E++V SWT ++ G
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAG-------------------- 1428
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
Y ++ + +EA+ + + +G+ + T
Sbjct: 1429 --------------------------------YGMHGRAKEALDIFYKMVRAGVKPNYIT 1456
Query: 322 FTSALKACINLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
F S L AC + F H + G E Y ++DL+ R G + A L
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE-HY---GCMVDLFGRAGCLNEAYNL 1512
Query: 379 FHRLP-KKDVVAWSGLIMGCTKH 400
R+ K D V W L+ C H
Sbjct: 1513 IKRMKMKPDFVVWGSLLGACRIH 1535
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 55/311 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY--------------------- 48
++ C SI GK +H +IKYG S D+F NNL+ Y
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 49 ADFTS----------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+T+ L +A ++FDE+ KN+VSWT M+ Y N++P A+ L+ M +
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QA 250
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
++ PN + +++KAC+ G L LGR IH+ + +E L L+DMY KCGS+
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK- 309
Query: 159 KLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAFC-VKRGFEKED-VTLTSLID 209
D + ++ WNSM++ G + ++ F ++R K D +T ++
Sbjct: 310 ---DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ + +G A F M + ++ I +EC + ++Y+ N L EA K
Sbjct: 367 ACVHIKNVKEGCAYFTRMTQHYGIA---PIPEHYEC-------MTELYARSNNLDEAFKS 416
Query: 270 FDQYSSWAASA 280
+ S A S
Sbjct: 417 TKEVGSLANSP 427
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C + + +H ++K G I GN L+ YA + K+
Sbjct: 1249 LDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKV 1308
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M K+ +SW +M+ Y + A+ +++ M+ + V N SAVL AC+ +G
Sbjct: 1309 FDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGA 1368
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALW 178
L G+ IH+++ + LEY+ + +++DMY KCG + +K FD+ NV W
Sbjct: 1369 LRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE------KNVKSW 1422
Query: 179 NSMLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+M++G G+ A V+ G + +T S++ G +++G FN M
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKH 1482
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+ + GC +VD++ L EA L +
Sbjct: 1483 KYDIEPGIEHYGC----------MVDLFGRAGCLNEAYNLIKR 1515
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V ++ C + + G+ +H IK + ++ G L+ MY+ S+ DA ++F+ M
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
RK++ +W +M+T+ + A+ L++ M E +V+P+ + VL AC ++ G
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCACVHIKNVKEGC 378
Query: 126 LIHERITR 133
R+T+
Sbjct: 379 AYFTRMTQ 386
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 193/656 (29%), Positives = 314/656 (47%), Gaps = 109/656 (16%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY--- 164
+VL+ C+ S L G+ + I D+ L + L MY CG L ++FD+
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 165 ---------SNWAASA--YGNVALWNSMLS------------------------GGKQVH 189
+ A S G++ L+ M+S GG+Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---------- 239
F +K GF + + SL+ YLK +D +F+ M ERDV+SW II
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 240 -------------------------VGCFEC---------------SCFT-----LSALV 254
GC + +CF+ + L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMYS C L A+ +F + S + +Y SMI+GY EA+ L + G
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSY------TSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 315 MCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ D YT T+ L C LL+ R VH I + D V + L+D+YA+ G++
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKR----VHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKV 431
+ A +F + KD+++W+ +I G +K+ + A LF ++ + ++ ++ VL
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ L++ +G+++H + ++ G+ + SL+DMY KCG + LF + +D+VSW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I G G +G KEAIA F +M Q+ ++ +EI+F+ +L AC H+GLV+E W F M+
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
E +EP +EHY C+VD+L + G A + I MP PD TIW ++L C H++ KL
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+AE++ PE+ YV+++N+YA W+ + ++RK G++ K G SWIE+
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%)
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ D++ + SVL++C+ SL+ GK+V F GF + + L MY CG++
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDL 145
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+ +F + + W ++ ++G +I F++M+ S ++ + TF
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 208/711 (29%), Positives = 337/711 (47%), Gaps = 86/711 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR CG + G+ +H ++K D F N L+SMY +L DA +F + + ++
Sbjct: 128 LRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDL 187
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W+++++ Y N +R++ M+ G +EP+ F +S VL AC+ D G H
Sbjct: 188 VGWSSILSGYVKNGLEEEGLRIFCDMVS-GGIEPDAFAFSMVLGACTNLECWDFGTQAHC 246
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + + L N+L+D Y KCG L R++F S N+ WN+ ++G
Sbjct: 247 YIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSE------KNLVSWNTFINGYVH 300
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK++H + ++ G E
Sbjct: 301 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYV 360
Query: 204 LTSLIDMYLKC-------GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
++SL+DMY+ C ++ L L N++ G ++ F +++L+
Sbjct: 361 VSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEG-----------GGYDE--FIMTSLLKW 407
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
S + L A+++F + + A W+++ISG+ N EA+ L + G+
Sbjct: 408 CSLESSLETAKRVFTRVEQ------PDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIK 461
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+ +TFTS + AC+ L N R ++H I+ SGYE ++ V + LI+LY+ L K AL
Sbjct: 462 ANEFTFTSVILACLALENL--RKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQAL 519
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+L +P ++ +W+ LI C + + L + S+ +++ + CS
Sbjct: 520 KLCSMIPDSEI-SWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPV 578
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
L G Q HA+ KRG SLI MY CG+ D+ + F MPE+D SWT I+
Sbjct: 579 LLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILS 638
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
++G EA+ +M ++ TF VL+AC GLV+EA+ +F SMK YG+E
Sbjct: 639 ARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIE 698
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMP-FKPDKTIWASMLKACETHNNTKLVSIIAE 615
P EHY CMV++LG+AG F++ I +P FK IW ++L + H N K+ AE
Sbjct: 699 PLEEHYSCMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAE 758
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEV 666
+LL P D S ++L V TLG WD+ K++ K + +A SWIE+
Sbjct: 759 KLLELEPSDFSANLLLEQVLLTLGEWDNALKLKTKTKSM---RASSSWIEI 806
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 161/663 (24%), Positives = 290/663 (43%), Gaps = 97/663 (14%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML---EY 98
N L MY + ++ +A KLFDEM +++VSWT +++ Y + + + ++ ML
Sbjct: 55 NLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGG 114
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G + P+ F+++ VL+AC + L GR +H + ++ D+ + N L+ MY CG+L
Sbjct: 115 GLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALED 174
Query: 159 KLFDQYSNWAASAYGNV-----ALWNSMLSG----------------------------- 184
AA +G + W+S+LSG
Sbjct: 175 ---------AAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAF 225
Query: 185 ---------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G Q H + +K GF+ SL+D Y KCG+++ +F+ M E
Sbjct: 226 SMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSE 285
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW----AASAYGNVA 285
+++VSW I G + + L AL +L E D +S A S G++
Sbjct: 286 KNLVSWNTFING-YVHNFHYLEALRIF----QILMEEVSQCDDFSLLSILKAVSGLGHLD 340
Query: 286 LWNSMISGYVLN---EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
I GY+L E N ++ L ++ CID + ++ + LLN+
Sbjct: 341 -HGKEIHGYILRAGIETNRYVVSSLLDMYIG--CIDHESLYPRVEVPLKLLNY------- 390
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+ GY D + ++L+ + ++++A +F R+ + D WS LI G + +G
Sbjct: 391 ----LEGGGY--DEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGC 444
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ A LFR M N+F +SV+ C L +LR+GK++H ++ G+E + +
Sbjct: 445 FAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNT 504
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC--GQNGRAKEAIAYFQEMIQSRLK 520
LI++Y + + L L +P+ + +SW +I C ++ + + ++ L
Sbjct: 505 LINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLD 563
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P ++ + ++C L+ M + GL H ++ + G FD+A Q
Sbjct: 564 P--VSACDIFASCSSPVLLNVGTQAHAYMT-KRGLISHPTISNSLIQMYSACGKFDEAVQ 620
Query: 581 LIAEMPFKPDKTIWASMLKACETHNN-TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
MP K D W S+L A H + ++ +++I++ P D S + + N A +G
Sbjct: 621 AFNLMPEK-DTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMG 679
Query: 640 MWD 642
+ D
Sbjct: 680 LVD 682
>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
Length = 787
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/664 (28%), Positives = 326/664 (49%), Gaps = 52/664 (7%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH ++ GL + F G++LL MYA + A + F + K++ W M+ Y SN
Sbjct: 155 SLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNG 214
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+ AI ++ + + P+ + Y + +KACS+S DLGR +H + LE +T +M
Sbjct: 215 FGHHAISTVL-VMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVM 273
Query: 144 NTLLDMYVKC------GSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF 191
N+L+DMY + S+ RK+ + + WN+M SG K V +
Sbjct: 274 NSLVDMYFRARQKETAASVFRKIRQK----------DTVSWNTMFSGFAHDEDDKAVFGY 323
Query: 192 CV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ + GF+ +VT + L+ + GL +F + +
Sbjct: 324 LIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG-----------YTDNVL 372
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+A+++M C +L A Y + + + N+ WN +I+GY L ++E+A+ L
Sbjct: 373 VANAVINMLFRCGLLDRA------YGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFR 426
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL-YA 367
+ G D +T+++ L A +R Q+H +I+ G+ V ++LI A
Sbjct: 427 SLVCIGERPDEFTYSAVLSAFQEA--HGARDHEQIHAIILKQGFASCQFVSTSLIKANAA 484
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIIS 426
G+V+S+L++ K ++V+W +I KHGLN LF +S ++FI++
Sbjct: 485 AFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILA 544
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE- 485
+VL C+ A +R + +H+ +K G ++++D Y KCGEI + F +
Sbjct: 545 TVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSA 604
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D + + ++ +G EA+ ++EM +++L P TF+ +LSAC H GLVE+
Sbjct: 605 TNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKL 664
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F++M YG+ P +Y C+VDLL + G D+A+ +I MPF+P +W S++ C H
Sbjct: 665 AFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIH 724
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMS 662
N +L + AEQ+L +P YV LSNVYA G W S + R+ KL +K G S
Sbjct: 725 GNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNKL-QKVHGYS 783
Query: 663 WIEV 666
+E+
Sbjct: 784 RVEM 787
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 160/347 (46%), Gaps = 16/347 (4%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L+ Y+ +L A K+FD+ + N+ W +M+S N
Sbjct: 64 FNMNYLLIYYARRGLLDSALKVFDEMP------HRNLVSWTAMVSASTRNGAPHLGFRFF 117
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLID 364
+ SG C + + + L AC ++L +S AL +HG+ V +G + + VGS+L+
Sbjct: 118 VSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLL 177
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ G + +A F + KD+ W+ ++ G +G A M +S +++
Sbjct: 178 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 237
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S +K CS A G+Q+H + E + SL+DMY + + + ++F+ +
Sbjct: 238 YISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 297
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-- 542
++D VSW + G + K Y +M ++ KPNE+TF +L R +G E A
Sbjct: 298 QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLL---RLSGAKENASL 354
Query: 543 -WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
IF ++ +G ++ ++++L + G D A + F+
Sbjct: 355 GLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 400
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/530 (19%), Positives = 218/530 (41%), Gaps = 39/530 (7%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ A++ C G+ LHC +I L + N+L+ MY A +F ++ +
Sbjct: 239 ISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQ 298
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW TM + + ++ M G +PN +S +L+ + LG
Sbjct: 299 KDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTG-FKPNEVTFSVLLRLSGAKENASLGLQ 357
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I R + ++ N +++M +CG L R Y + + + N+ WN +++G
Sbjct: 358 IFALAYRHGYTDNVLVANAVINMLFRCGLLDRA----YGFFCSLTFRNIVTWNEIIAGYG 413
Query: 185 --GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+ A + R G ++ T ++++ + + D + + ++ S
Sbjct: 414 LFSRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 473
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ + + +A + S+ ++ ++ K+ + W ++IS ++ +
Sbjct: 474 VSTSLIKANA---AAFGSVQSSLKIIEDSGKM-------------ELVSWGAIISAFLKH 517
Query: 298 EQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N+E I L + S D + + L AC N R +H L++ +G+ +
Sbjct: 518 GLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHF 575
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V S ++D YA+ G + SA F + D + ++ ++ HGL A L+ +M
Sbjct: 576 CVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMT 635
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEI 473
+ + ++L CS L + +GK + + G E L+D+ + G +
Sbjct: 636 KAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLL 695
Query: 474 DDGLALFKFMPERD-VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
D+ + MP + W ++ GC +G + + ++++ R+ P+
Sbjct: 696 DEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQIL--RMAPS 743
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/696 (27%), Positives = 343/696 (49%), Gaps = 85/696 (12%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+++H + +K L +DIF GN L+S Y + DA K+F ++ N+VS+T +++ ++
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ + A+ L+ ML+ G +EPN + + A+L AC + D LG +H + + L
Sbjct: 174 SDWEDEAVELFFAMLDSG-IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVF 232
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N L+ +Y KCG L +LF++ ++ WN+++S
Sbjct: 233 ICNALMGLYCKCGFLDLVLRLFEEMPE------RDITSWNTVISSLVKEFKYDEAFDYFR 286
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G+Q+HA +K G E +SLI Y KC
Sbjct: 287 GMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKC 346
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G +D LF MP RDV++WTG+I Y +L A ++F++
Sbjct: 347 GSANDVTDLFETMPIRDVITWTGMITS---------------YMEFGMLDSAVEVFNKMP 391
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N +N++++G N+ A+ L + G+ I T TS + AC L +
Sbjct: 392 K------RNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH-RLPKKDVVAW-SG 392
F + + Q+ G ++ G + + + L+D+Y R G ++ A ++F+ R + D A +
Sbjct: 446 F--KVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTS 503
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G ++G + A LF + V ++ + +S+L +C + GKQ+H +K
Sbjct: 504 MICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKS 563
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G E + + MY KC +DD + +F M +D+VSW G++ G + + +A+ +
Sbjct: 564 GLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIW 623
Query: 512 QEMIQSRLKPNEITFLGVLSACRHA--GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
++M ++ +KP+ ITF ++SA +H LV+ ++F SM+ E+ ++P LEHY + +L
Sbjct: 624 KKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVL 683
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+ G ++AEQ I MP +PD +W ++L +C + N +L + A +LA P+DP Y+
Sbjct: 684 GRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYI 743
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+ SN+Y+ G W KVR+ ++ G K SWI
Sbjct: 744 LKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWI 779
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG + GK +HC +K GL + GN +SMY+ +++DA ++
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRV 591
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
F+ M ++IVSW +V + + + + A+ ++ M E ++P+ ++ ++ A
Sbjct: 592 FNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM-EKAGIKPDSITFALIISA 644
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 270/524 (51%), Gaps = 33/524 (6%)
Query: 162 DQYSNWAASAY-----GNVALWNSMLS----GGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
+ +SN A Y NV WNS+++ GG V A K + T
Sbjct: 1962 EDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTR---SSF 2018
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
C I AL + + R +S V FE F SAL+DMYS C L +AR LFD+
Sbjct: 2019 PC-TIKSCSALCDLVSGR--MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDE 2075
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI--------HSSGMCIDSYTFTS 324
NV W SMI+GYV NEQ + A+ L + + +DS S
Sbjct: 2076 I------PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVS 2129
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L AC + VHG +V G++ VG+ L+D YA+ G + ++F + +
Sbjct: 2130 VLSACSRVSG--KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE 2187
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS-NQDVNQFIISSVLKVCSCLASLRRGKQ 443
KD ++W+ +I + GL+ A +F M+ N +S+VL C+ +LR GK
Sbjct: 2188 KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 2247
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H +K E TS+IDMY KCG ++ F M E++V SWT ++ G G +GR
Sbjct: 2248 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 2307
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
AKEA+ F +M+++ +KPN ITF+ VL+AC HAGLVEE W F +MK +Y +EP +EHY
Sbjct: 2308 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 2367
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
CMVDL G+AGC ++A LI M KPD +W S+L AC H N L I A++L P+
Sbjct: 2368 CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPD 2427
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
+ YV+LSN+YA G W + ++R K + K G S +E+
Sbjct: 2428 NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVEL 2471
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 176/361 (48%), Gaps = 43/361 (11%)
Query: 266 ARKLFDQYSSWAASAYGNVAL----------WNSMISGYVLNEQNEEAITLLSHIHSSGM 315
RKL YS+ AY + WN +I +N +E+A+ L ++ G+
Sbjct: 62 TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D +TF +KAC N L+ + VHG ++ G+ D V +NLID Y + G+ + A
Sbjct: 122 AADKFTFPFVIKACTNFLSID--LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 376 LELFHRL-------------------------------PKKDVVAWSGLIMGCTKHGLNS 404
L++F ++ P K+VV+W+ +I G ++
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF+ M N N++ + S++K C+ + L G+ +H + +K E T+LI
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALI 299
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY KCG I D + +F+ MP + + +W +I G +G +EA+ F EM + +KP+ I
Sbjct: 300 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 359
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TF+GVL AC H V+E FT M YG+ P EHY CM +L ++ D+A + E
Sbjct: 360 TFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKE 419
Query: 585 M 585
+
Sbjct: 420 V 420
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 199/457 (43%), Gaps = 52/457 (11%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ N+ SW +++ A+R ++ + + G + P + +K+CS DL GR
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTIKSCSALCDLVSGR 2035
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+ H++ E D + + L+DMY KCG L R LFD+ NV W SM++
Sbjct: 2036 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI------PLRNVVSWTSMIT 2089
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG-------LALFNFMPERDVVSWT 236
G Q E+ D L D + E++DG + + + + VS
Sbjct: 2090 GYVQN---------EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 2140
Query: 237 GIIVGC--------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
GI G F+ S + L+D Y+ C ++K+FD W + WN
Sbjct: 2141 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD----WMEEK--DDISWN 2194
Query: 289 SMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
SMI+ Y + + EA+ + + G+ ++ T ++ L AC + R +H +
Sbjct: 2195 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGAL--RAGKCIHDQV 2252
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ E + VG+++ID+Y + G V+ A + F R+ +K+V +W+ ++ G HG A
Sbjct: 2253 IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEAL 2312
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTS 462
+F M+ + N SVL CS + G H + ++ G E
Sbjct: 2313 DIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGC 2368
Query: 463 LIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGC 498
++D++ + G +++ L K M + D V W ++ C
Sbjct: 2369 MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 2405
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 138/304 (45%), Gaps = 41/304 (13%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
N + Q+H I+ SG D ++ LI LY+ G + A+ LF+++ W+ +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
T +GL+ A +L+++M+ ++F V+K C+ S+ GK VH +K GF
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG---CG------------- 499
+ +LID Y KCG L +F+ M R+VVSWT +I G CG
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 500 ---------------QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
+N + +EA+ F+ M + PNE T + ++ AC G++
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 545 IFTSMKPEYGLEPHLE-HYY---CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I +Y ++ +E Y ++D+ + G DA ++ MP K T W SM+ +
Sbjct: 279 IH-----DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITS 332
Query: 601 CETH 604
H
Sbjct: 333 LGVH 336
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 66/408 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L++C + ++Q +H +II+ GLS D L+ +Y+ + A LF ++
Sbjct: 34 LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W ++ A T N A+ LY +M+ G + + F + V+KAC+ +DLG+++H
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 130 RITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + D + N L+D Y KCG K+F++ NV W +++SG
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR------VRNVVSWTTVISGLIS 203
Query: 185 -GKQVHAFCVKRGFE----KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SW 235
G A +R F+ K V+ T++I+ Y++ + ++ L LF M ++ +
Sbjct: 204 CGDLQEA---RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTM 260
Query: 236 TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSS 275
+I C E TL +AL+DMYS C + +A ++F+
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
++ WNSMI+ ++ +EA+ L S + + D+ TF L AC+++ N
Sbjct: 321 ------KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 336 NSRFA-----LQVHGLI-VTSGYELDYIVGSNLIDLYARLGNVKSALE 377
A Q +G+ + YE + +LYAR N+ A +
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYEC-------MTELYARSNNLDEAFK 415
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 173/444 (38%), Gaps = 108/444 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
++ C + G+ H + +G D+F + L+ MY+ L DA LFDE+ +N
Sbjct: 2021 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 2080
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEY-------GSVEPNGFMYSAVLKACSLSGDL 121
+VSWT+M+T Y N++ + A+ L+ LE +V + + +VL ACS
Sbjct: 2081 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 2140
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFD------------QYSNW 167
+ +H + ++ + + NTL+D Y KCG +++K+FD + +
Sbjct: 2141 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 2200
Query: 168 AASAYGNVAL-------------WNSM--------------LSGGKQVHAFCVKRGFEKE 200
A S AL +N++ L GK +H +K E
Sbjct: 2201 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 2260
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TS+IDMY KCG ++ F+ M E++V SWT ++ G
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAG------------------- 2301
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
Y ++ + +EA+ + + +G+ +
Sbjct: 2302 ---------------------------------YGMHGRAKEALDIFYKMVRAGVKPNYI 2328
Query: 321 TFTSALKACINLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
TF S L AC + F H + G E Y ++DL+ R G + A
Sbjct: 2329 TFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE-HY---GCMVDLFGRAGCLNEAYN 2384
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKH 400
L R+ K D V W L+ C H
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIH 2408
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C SI GK +H +IKYG S D+F NNL+ Y A K+F++M +N+
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 70 VSWTT-------------------------------MVTAYTSNKRPNWAIRLYNHMLEY 98
VSWTT M+ Y N++P A+ L+ M +
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QA 250
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
++ PN + +++KAC+ G L LGR IH+ + +E L L+DMY KCGS+
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK- 309
Query: 159 KLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAFC-VKRGFEKED-VTLTSLID 209
D + ++ WNSM++ G + ++ F ++R K D +T ++
Sbjct: 310 ---DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ + +G A F M + ++ I +EC + ++Y+ N L EA K
Sbjct: 367 ACVHIKNVKEGCAYFTRMTQHYGIA---PIPEHYEC-------MTELYARSNNLDEAFKS 416
Query: 270 FDQYSSWAASA 280
+ S A S
Sbjct: 417 TKEVGSLANSP 427
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 27/278 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C + + +H ++K G I GN L+ YA + K+FD M
Sbjct: 2127 MVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME 2186
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +SW +M+ Y + A+ +++ M+ + V N SAVL AC+ +G L G+
Sbjct: 2187 EKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK 2246
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH+++ + LEY+ + +++DMY KCG + +K FD+ NV W +M++
Sbjct: 2247 CIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE------KNVKSWTAMVA 2300
Query: 184 G----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G G+ A V+ G + +T S++ G +++G FN M + +
Sbjct: 2301 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIE 2360
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
GC +VD++ L EA L +
Sbjct: 2361 PGIEHYGC----------MVDLFGRAGCLNEAYNLIKR 2388
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V ++ C + + G+ +H IK + ++ G L+ MY+ S+ DA ++F+ M
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC 115
RK++ +W +M+T+ + A+ L++ M E +V+P+ + VL AC
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCAC 368
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 274/521 (52%), Gaps = 57/521 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
GGK VH GF++ + + LI MY +CG + +F+ M R++ SW ++
Sbjct: 78 FKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLA 137
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y+ + ARKLFD+ +V WN+++ Y
Sbjct: 138 G---------------YAKLGDVNNARKLFDRMME------KDVVSWNTIVLAYAKQGCF 176
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EAI L M ++++F L C+ L + A QVHG ++ +G+ + ++ S
Sbjct: 177 NEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL--QLAKQVHGQVLVAGFLSNLVLSS 234
Query: 361 NLIDLY-------------------------------ARLGNVKSALELFHRLPKKDVVA 389
+++D Y A+ G++ SA ELFH++P+K+ V+
Sbjct: 235 SIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVS 294
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
WS LI G ++ L A F M+ + Q+ SS L C+ +A+L+ GKQVH + +
Sbjct: 295 WSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLI 354
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAI 508
+ F I ++SLIDMY KCG ++ +F M ++DVV W +I QNG ++A+
Sbjct: 355 RTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAM 414
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M++S LKP+ ITF+ +LSAC H+GLV+E F +M ++G+ P EHY C++DL
Sbjct: 415 QMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDL 474
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF + + M KPD +W+++L C HNN +L +AE+++ P+ + Y
Sbjct: 475 LGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAY 534
Query: 629 VMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
V L+++YA LG W+S+ KVR+ +K K+ G+SWI+V +
Sbjct: 535 VSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGN 575
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 184/443 (41%), Gaps = 108/443 (24%)
Query: 22 GKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G+ + R + +S +++++ N++L+ YA +N+A KLFD M K++VSW T+V AY
Sbjct: 112 GRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYA 171
Query: 81 SNKRPNWAIRLYNHM--LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
N AI LY L+ G N F ++ VL C +L L + +H ++
Sbjct: 172 KQGCFNEAIGLYRDFRRLDMGF---NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLS 228
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
+ VL ++++D Y KCG + R LFD+ ML K +HA+
Sbjct: 229 NLVLSSSIVDAYSKCGEMRCARTLFDE-----------------MLV--KDIHAW----- 264
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------- 241
T+++ Y K G+++ LF+ MPE++ VSW+ +I G
Sbjct: 265 --------TTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFT 316
Query: 242 ----------------CFECSCFTLSA----------LVDMYSNCNVLCEARKLFDQYSS 275
C C+C +++A L+ Y CN + L D YS
Sbjct: 317 KMMKFGINPEQYTFSSCL-CACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSK 374
Query: 276 WAA--------SAYGN---VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
GN V +WN+MIS N E+A+ + + + SG+ D TF
Sbjct: 375 CGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIV 434
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLG-NVKSALE 377
L AC S L GL D+ V + LIDL R G V+ E
Sbjct: 435 ILSAC-------SHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNE 487
Query: 378 LFHRLPKKDVVAWSGLIMGCTKH 400
L + K D WS L+ C H
Sbjct: 488 LENMSCKPDDRVWSALLGVCRIH 510
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 24/233 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV+A CG+ R + + L +DI ++S YA + +N A +LF +M
Sbjct: 236 IVDAYSKCGEMRCART-------LFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP 288
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN VSW+ +++ Y N + A+ + M+++G + P + +S+ L AC+ L G+
Sbjct: 289 EKNPVSWSALISGYARNSLGHEALDYFTKMMKFG-INPEQYTFSSCLCACASIAALKHGK 347
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H + R +T+++++L+DMY KCG L +F N +V +WN+M+S
Sbjct: 348 QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGN-----KQDVVVWNTMIS 402
Query: 184 -------GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G K + F V+ G + + +T ++ G + +GL F M
Sbjct: 403 ALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 203/724 (28%), Positives = 325/724 (44%), Gaps = 127/724 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + A+ C R+ QG LH ++K G +F G++L+++Y+ + L ++ +F
Sbjct: 12 DQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVF 71
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M KN VSWT M++ + + R VEP ++++++ + D+
Sbjct: 72 QTMPTKNTVSWTAMISGFALHNR----------------VEPCLHLFASMMLSSCKPNDI 115
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
L +V +++
Sbjct: 116 TFATLF----------------------------------------------SVCTKHAL 129
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ G+ VHA ++ GF +L+ MY KCG I++ +F + +D+VSW II G
Sbjct: 130 LALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFG 189
Query: 242 CFECSCFTLS--------------------ALVDMYSNCN---VLCEARKLF-------- 270
CS + L+ + + + S+C ++ E R F
Sbjct: 190 ---CSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGI 246
Query: 271 ----DQYS--------------SW----AASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
D YS +W S N +W S++ ++ I
Sbjct: 247 KPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAE 306
Query: 309 H-----IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
H D +A+ +C + F Q+HGL+V G + +GS+LI
Sbjct: 307 HRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQ--GTQLHGLLVKVGCDSTVFIGSSLI 364
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
LY+R ++S+ +F +P K+ V+W+ +I G H LF M S+ N
Sbjct: 365 TLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDI 424
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+++ VC+ A L GK VHA ++ GF +L+ MY KCG ID+ ++F F+
Sbjct: 425 TFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFI 484
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+D+VSW +I GC Q G AK + +EM + + P+ ++FLGVLS+CRHA LVEE
Sbjct: 485 ACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGR 544
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F +M E+G++P L+HY CMVDLLG+AG ++A LI M P+ IW S+L +C
Sbjct: 545 HCFKTM-IEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRV 603
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEK-KAGMS 662
H N + AE L P + ++ L+N+YAT+G W +++VR A K G K G S
Sbjct: 604 HGNISIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCS 663
Query: 663 WIEV 666
WIEV
Sbjct: 664 WIEV 667
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/561 (19%), Positives = 210/561 (37%), Gaps = 112/561 (19%)
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G + + +A + +C+ G +H + + + + ++L+ +Y +C L
Sbjct: 7 GETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLE- 65
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
Y + N W +M+SG
Sbjct: 66 ---SSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFS 122
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ VHA ++ GF +L+ MY KCG I++ +F + +D+VS
Sbjct: 123 VCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVS 182
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W II GC S Y
Sbjct: 183 WNAIIFGC-------------------------------------------------SQY 193
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYE 353
VL + + LL + + D+ +F L +C + L R + ++ G +
Sbjct: 194 VLAKH---CLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKT---MIEHGIK 247
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH-----GLNSLAY 407
S ++DL R G ++ A +L + + V W L+ C H G+ + +
Sbjct: 248 PGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEH 307
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L + +Q I+++ + C+ +G Q+H VK G + +SLI +Y
Sbjct: 308 RLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLY 367
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+C +++ +F+ MP ++ VSWT +I G + R + + F M S KPN+ITF
Sbjct: 368 SRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFA 427
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+ S C + L+ ++ +++ G ++ ++ + + GC D+A+ + +
Sbjct: 428 TLFSVCTNHALLALGKSVH-ALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIAC 486
Query: 588 KPDKTIWASMLKACETHNNTK 608
K D W +M+ C + K
Sbjct: 487 K-DLVSWNAMIFGCSQYGLAK 506
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 206/735 (28%), Positives = 346/735 (47%), Gaps = 115/735 (15%)
Query: 30 IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAI 89
+K G + D F + +++ +A A + + + VSW ++++ Y ++P
Sbjct: 47 LKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVF 106
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
L+N + G + P+ F S+++K C G L+ + H + L + +++ LLD
Sbjct: 107 DLFNGLRRSG-LSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGL-LNGFVVSGLLDG 161
Query: 150 YVKCGSL--TRKLFDQY-----SNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF----E 198
Y K G + K F ++ W A G V WN G++V F RG E
Sbjct: 162 YAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFV--WNGEFEKGREV--FVEMRGLGLGLE 217
Query: 199 KEDVTLTS----------------------------------LIDMYLKCGEIDDGLALF 224
+ +LTS L++MY +CG D + +F
Sbjct: 218 LNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMF 277
Query: 225 NFMPERDVVSWTGII------VGCFECSCFTLS--------------------------- 251
+ M E DVVSWT I + FE LS
Sbjct: 278 DEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGR 337
Query: 252 -------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
AL+ MY C + AR +FD+ G+ WNS+I+
Sbjct: 338 QIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLC------GDSVSWNSLIA 391
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY N ++A+ + S + + + YT S L+ N NF + A+Q+H IV G+
Sbjct: 392 GYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANS-NFPEQ-AMQIHSYIVKLGF 449
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+D + S LI Y + + + ++ + + +V+ + + G ++ A LF+
Sbjct: 450 IVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQT 509
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+Q+V+ +S VLK C L L G+ +H+ +K G +++ +++ID+Y KCG
Sbjct: 510 GWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGT 569
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+D+ F + + ++V+W +++G Q+G E F +M++ ++P+EIT+LGVL++
Sbjct: 570 VDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNS 629
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C HAGLV EA T +SM +G+ P LEHY CM+DL G+ G +DA++ I +MP PD
Sbjct: 630 CCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQ 689
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-G 651
IW +L C H N L + A++L+ PE+ S YV+LSN+YA+ G W+++ K+R+
Sbjct: 690 IWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMK 749
Query: 652 KKLGEKKAGMSWIEV 666
KK+ K+ G SWI+V
Sbjct: 750 KKIICKEPGSSWIQV 764
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ AL+A +LL+ Q + L + SG+ LD + S +++ +A G+ A
Sbjct: 23 YPQALRASASLLH--PPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLD 80
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
P D V+W+ LI G + + LF + S ++F +SS++K C L +
Sbjct: 81 TPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGV---LEQN 137
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+ H C+K G ++ L+D Y K G++D FK D V WT ++ G N
Sbjct: 138 EVAHGVCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWN 196
Query: 502 GRAKEAIAYFQEM--IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
G ++ F EM + L+ NE + VL A E+ + + M G HL
Sbjct: 197 GEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHL 256
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ ++++ + G DA ++ EM +PD W + A
Sbjct: 257 NN--ALMNMYSRCGSKSDAIKMFDEMT-EPDVVSWTERIGA 294
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 186/449 (41%), Gaps = 116/449 (25%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L ++ A+R + + +K G+ + K G N L+ MY + A +FD
Sbjct: 320 LINVLSAMR---EPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFD 376
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM + VSW +++ Y N A+++++ M +Y ++PN + +++L+ + S +
Sbjct: 377 EMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDY-LLQPNKYTLASILEVAANSNFPE 435
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
IH I + D +++ L+ Y KC + +++++ S NV N+
Sbjct: 436 QAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQI------NVLHLNA 489
Query: 181 M--------------------------------------------LSGGKQVHAFCVKRG 196
M L G+ +H+ +K G
Sbjct: 490 MAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSG 549
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+++ +++ID+Y KCG +D+ F + + ++V+W +++G + C+
Sbjct: 550 MSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCY-------- 601
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS---S 313
++F+ L+N M+ L Q +E IT L ++S +
Sbjct: 602 ----------HEVFE--------------LFNKMLE---LGIQPDE-ITYLGVLNSCCHA 633
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ +++T+ S++ L++HG++ L++ + +IDL+ R+G ++
Sbjct: 634 GLVNEAHTYLSSM--------------LELHGVVPC----LEHY--ACMIDLFGRVGLLE 673
Query: 374 SALELFHRLP-KKDVVAWSGLIMGCTKHG 401
A ++P D W L+ GC HG
Sbjct: 674 DAKRTIDQMPIMPDAQIWQILLSGCNIHG 702
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 217/727 (29%), Positives = 343/727 (47%), Gaps = 103/727 (14%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
Q S+K H II G S +IF + L+S+YA F + + +LFDE+ ++ W +
Sbjct: 44 QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNS 103
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ A+ SN + A+ Y M ++ PN F ++ +C+ ++ GR IH +++
Sbjct: 104 IIKAHFSNGEYSRALDFYQWMRASEAL-PNHFTIPMIVASCAELELVNYGRSIHGLVSKL 162
Query: 135 KL-EYDTVLMNTLLDMYVKCGSLTRK-------LFDQYSNWAASAYGNVALWNS------ 180
L + + ++ + MY KCG L LF W A G V S
Sbjct: 163 GLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLEC 222
Query: 181 -----------------MLSGGKQ-------------VHAFCVKRGFEKEDVTLTSLIDM 210
L GG Q +H VK G + V + L+ M
Sbjct: 223 LCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSM 282
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFECSCFTLSALVD-MYSNCNVL 263
Y KCG ++ F + +D++SWT +I EC LV +Y + V+
Sbjct: 283 YSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVI 342
Query: 264 -CEARKLFDQYSSWAASAYGNVAL----------WNSMISGYV--------------LNE 298
C + + A A+ + + N+++S Y +NE
Sbjct: 343 SCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNE 402
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
QN EA L+ + Y T A +H ++ + + + V
Sbjct: 403 QNFEAWNLM---------VSGYGAT--------------HLARSIHCYMIKNLMDENVSV 439
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
++LID+Y + GN+ A +F R+P+ D+V W+ LI G + A L+ M+ +
Sbjct: 440 NNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDL 498
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N + SVL CS LASL G++VH + FE T+LIDMY KCG+++
Sbjct: 499 KPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSRE 558
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F M ERDV++W +I G G +G A+ AI +FQ+M +S KPN +TFL VLSAC HAGL
Sbjct: 559 IFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGL 618
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
V+E +F M+ +Y + P+L+HY CMVDLLG++G +AE L+ MP PD +W ++L
Sbjct: 619 VKEGKYLFGKMQ-DYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALL 677
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EK 657
+C+ HN ++ IA+ + + E+ YVM+SN+Y+++G W+ K R K+ G K
Sbjct: 678 SSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRK 737
Query: 658 KAGMSWI 664
K G S +
Sbjct: 738 KTGWSAV 744
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 227/531 (42%), Gaps = 77/531 (14%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+ R + + CG ++ +G+ LH ++K G+ + LLSMY+ + +AH+ F
Sbjct: 237 NFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSF 296
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWA---IRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
E+ K+I+SWT+M++AY+ R WA I ++ ML G + P+G + S +L + S S
Sbjct: 297 CEVLNKDIISWTSMISAYS---RMGWATECIDMFWEMLVSG-IYPDGIVISCMLSSFSNS 352
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVA 176
+ + H I R D ++ N LL MY K G L K F + + N
Sbjct: 353 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNE------QNFE 406
Query: 177 LWNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
WN M+SG + +H + +K ++ SLIDMY K G + +F +P R
Sbjct: 407 AWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-R 465
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D+V+W + L+ Y++C EA L+D+
Sbjct: 466 DIVTW---------------NTLISSYAHCGHFAEALSLYDK------------------ 492
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
VL + + TL+ S L AC +L + +VH I
Sbjct: 493 ---MVLEDLKPNSATLV----------------SVLSACSHLASLEE--GEKVHNYINGG 531
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
+E + + + LID+YA+ G ++ + E+F+ + ++DV+ W+ +I G HG A F
Sbjct: 532 KFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFF 591
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+ M S+ N +VL C+ ++ GK + ++D+ +
Sbjct: 592 QQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRS 651
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
G + + AL MP D W ++ C + + I + I S ++
Sbjct: 652 GNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVE 702
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 204/720 (28%), Positives = 323/720 (44%), Gaps = 120/720 (16%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QG+ +H I+ L D+ GN L+ M A L+ A + F M R++++SWT MVT
Sbjct: 141 SLAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVT 200
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY N A Y ML G V PN + AVL ACS + D DL ++ + + E
Sbjct: 201 AYARNGHIAEAFGYYLRMLLEGVV-PNNITFLAVLAACSSARDADL---VYGNVVEAEWE 256
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM-------------- 181
DT++ N ++M+ KCG L R +F + W +V WN+M
Sbjct: 257 TDTMVANASINMFSKCGCLDRAHDVFHRMKRW------DVKSWNAMVAALAQHGFSSEAL 310
Query: 182 -----------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
L GK +H+ + G E + V T+L+ MY
Sbjct: 311 ELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYS 370
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGII--------------------------------- 239
+CG++ + +F+ + ++VVSW +I
Sbjct: 371 RCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTAL 430
Query: 240 --VGCFECSC------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
V EC F SALV+MY L +AR++F++
Sbjct: 431 NVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIE---- 486
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V WN+++ V + Q EA+ S + G + TF AL A + +
Sbjct: 487 --RDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSA---VSPDRVSY 541
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
++HGLI SG E D V + LI +YAR +++ A F RL K +V+W+ +I C
Sbjct: 542 GRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVD 601
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G A LF+ M + ++ ++VL+ C+ +++ R GK VH+ + G E
Sbjct: 602 LGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFV 658
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
T+LI M+ K G + + +F+ + + W ++ G Q G ++ I +F M Q +
Sbjct: 659 ATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGV 718
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
P+ ITFL V+SAC HAGLVE+ F SM P+YG+ LE Y C++DLL +AG ++A
Sbjct: 719 APDHITFLAVVSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAY 778
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ MP P W ++L AC+ + + S A ++ P + +V LS + + G
Sbjct: 779 DFLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSYMSSIAG 838
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/718 (24%), Positives = 308/718 (42%), Gaps = 119/718 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + ++ + C +R+ + + S++ I G+ D F G +++ M+ S++DA ++F
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++M +++V WT+MVTA+ ++ + A + M G V P+ + ++L AC L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEG-VLPDRVTFISILNACE---SL 142
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWA------ 168
G L+H I + LE D V+ N L+ M KC L + F + +W
Sbjct: 143 AQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAY 202
Query: 169 ------ASAYG------------NVALWNSMLSG------GKQVHAFCVKRGFEKEDVTL 204
A A+G N + ++L+ V+ V+ +E + +
Sbjct: 203 ARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADLVYGNVVEAEWETDTMVA 262
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------------- 244
+ I+M+ KCG +D +F+ M DV SW ++ +
Sbjct: 263 NASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAV 322
Query: 245 ---------CSCFTLSALVD-------------------------MYSNCNVLCEARKLF 270
+C +L D MYS C L EAR++F
Sbjct: 323 DKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVF 382
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQ-NEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
D NV WN+MI+ Y +E + A+ + + G+ T T+AL
Sbjct: 383 DGILG------KNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGV---RPTRTTALNV- 432
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
++ + S Q+HG IV +G D +GS L+++Y R G++ A +F ++ ++DV A
Sbjct: 433 VSAVECQS-VGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFA 491
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR--RGKQVHAF 447
W+ ++ C HG A F M+ N+ ++ L S ++ R G+++H
Sbjct: 492 WNAIVGVCVGHGQPREALEWFSRMLLEGASGNR---ATFLLALSAVSPDRVSYGRKLHGL 548
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+ G E ++ +LI MY +C ++D F + ++ +VSWT +I C G +EA
Sbjct: 549 IAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEA 608
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
I FQ M L+P+ +TF VL AC E + + + E GLE ++ ++
Sbjct: 609 IDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRAR-ELGLESNVFVATALIH 664
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK--ACETHNNTKLVSIIAEQLLATSPE 623
+ + G +A + I E P W +ML A H+ + + A Q +P+
Sbjct: 665 MHSKFGNLGEARR-IFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPD 721
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 198/500 (39%), Gaps = 116/500 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V AL C S++ GKS+H R+ + GL D+ G L++MY+ L +A ++
Sbjct: 322 VDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRV 381
Query: 61 FDEMARKNIVSWTTMVTAYTSNKR-PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD + KN+VSW M+ AY ++ + A+ ++ ML G V P + L S
Sbjct: 382 FDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDG-VRPT---RTTALNVVSAVE 437
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--- 169
+G+ +H I L D+ + + L++MY + GSL R++F++ W A
Sbjct: 438 CQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVG 497
Query: 170 ---------------------SAYGNVALWNSMLSG--------GKQVHAFCVKRGFEKE 200
A GN A + LS G+++H + G E +
Sbjct: 498 VCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVSYGRKLHGLIAESGLEAD 557
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC------------------ 242
+ +LI MY +C ++D F+ + ++ +VSWT +I C
Sbjct: 558 NNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL 617
Query: 243 ----------------------------------FECSCFTLSALVDMYSNCNVLCEARK 268
E + F +AL+ M+S L EAR+
Sbjct: 618 EPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARR 677
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F+ A +A WN+M+ GY ++ I + G+ D TF + + A
Sbjct: 678 IFE------AVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSA 731
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRL 382
C S L G + DY VG LIDL AR G ++ A + +
Sbjct: 732 C-------SHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGM 784
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
P V W L+ C G
Sbjct: 785 PCGPSDVTWKTLLAACKIQG 804
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 201/711 (28%), Positives = 330/711 (46%), Gaps = 84/711 (11%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM--ARKNIVSW 72
Q +S+ + H +++ GL D +++SMY F S A + + + + W
Sbjct: 57 QCKSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWW 113
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ ++LY M G P+ + + VLKAC G +H +
Sbjct: 114 NQLIRRSVHLGFLEDVLQLYRRMQRLG-WRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------- 182
E++ + N L+ MY +CG+ R++FD+ G++ WNS++
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRE---RGVGDLVSWNSIVAAYMQGGD 229
Query: 183 -------------------------------------SGGKQVHAFCVKRGFEKEDVTLT 205
S GKQVH + ++ G ++
Sbjct: 230 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 289
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+++DMY KCG +++ +F M +DVVSW ++ G YS +
Sbjct: 290 AVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG---------------YSQIGRFDD 334
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A LF++ NV W+++I+GY EA+ + + G + T S
Sbjct: 335 ALGLFEKIREEKIEL--NVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSL 392
Query: 326 LKACINLLNFNSRFALQVHGL-----IVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
L C + H + + + D +V + LID+Y++ + K+A +F
Sbjct: 393 LSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFD 452
Query: 381 RLPKKD--VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLA 436
+P KD VV W+ LI G +HG + A LF M+ + V N F IS L C+ L
Sbjct: 453 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 512
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+LR G+Q+HA+ ++ FE + + + LIDMY K G++D +F M +R+ VSWT ++
Sbjct: 513 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLM 572
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G +GR +EA+ F EM + L P+ +TF+ VL AC H+G+V++ F M ++G+
Sbjct: 573 TGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGV 632
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
P EHY CMVDLL +AG D+A +LI MP KP +W ++L AC + N +L A
Sbjct: 633 VPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAAN 692
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
QLL + Y +LSN+YA W ++++R K G +K+ G SW++
Sbjct: 693 QLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 743
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 70/543 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ CG+ S + G S+H + G ++F GN L+SMY + +A ++FDEM +
Sbjct: 152 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 211
Query: 68 -NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++VSW ++V AY A++++ M E + P+ VL AC+ G G+
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H R L D + N ++DMY KCG + K+F++ +V WN+M++G
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK------VKDVVSWNAMVTG 325
Query: 185 GKQVHAFCVKRG-FEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFM----PERD 231
Q+ F G FEK VT +++I Y + G + L +F M E +
Sbjct: 326 YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPN 385
Query: 232 VVSWTGIIVGCF---------ECSC------------------FTLSALVDMYSNCNVLC 264
VV+ ++ GC E C ++AL+DMYS C
Sbjct: 386 VVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 445
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTF 322
AR +FD S V W +I G + + EA+ L S + + +++T
Sbjct: 446 AARAMFDLIPPKDRS----VVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 501
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHR 381
+ AL AC L RF Q+H ++ + +E + +N LID+Y++ G+V +A +F
Sbjct: 502 SCALMACARLGAL--RFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +++ V+W+ L+ G HG A +F +M + VL CS + +G
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
Query: 442 KQV-----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGII 495
F V G E ++D+ + G +D+ + L + MP + + W ++
Sbjct: 620 INYFNGMNKDFGVVPGAEH----YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALL 675
Query: 496 VGC 498
C
Sbjct: 676 SAC 678
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 185/490 (37%), Gaps = 154/490 (31%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C + +GK +H ++ GL +D+F GN ++ MYA + +A+K+F
Sbjct: 249 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 308
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPN--------------------W-------------- 87
+ M K++VSW MVT Y+ R + W
Sbjct: 309 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 368
Query: 88 -AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT------ 140
A+ ++ ML GS EPN ++L C+ +G L G+ H + L D
Sbjct: 369 EALDVFRQMLLCGS-EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDD 427
Query: 141 -VLMNTLLDMYVKCGS--LTRKLFD-------QYSNWAASAYGN---------VALWNSM 181
+++N L+DMY KC S R +FD W GN + L++ M
Sbjct: 428 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487
Query: 182 LSG--------------------------GKQVHAFCVKRGFEKEDVTLTS-LIDMYLKC 214
L G+Q+HA+ ++ FE + + + LIDMY K
Sbjct: 488 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKS 547
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G++D +F+ M +R+ VSWT ++ G
Sbjct: 548 GDVDAARVVFDNMHQRNGVSWTSLMTG--------------------------------- 574
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
Y ++ + EEA+ + + + D TF L AC
Sbjct: 575 -------------------YGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYAC----- 610
Query: 335 FNSRFALQVHGLIVTSGYELDY--IVGSN----LIDLYARLGNVKSALELFHRLPKKDVV 388
S + G+ +G D+ + G+ ++DL +R G + A+EL +P K
Sbjct: 611 --SHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTP 668
Query: 389 A-WSGLIMGC 397
A W L+ C
Sbjct: 669 AVWVALLSAC 678
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLS-------QDIFTGNNLLSMYADFTSLNDAH 58
+V L C ++ GK HC IK+ L+ D+ N L+ MY+ S A
Sbjct: 389 LVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 448
Query: 59 KLFDEMARKN--IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKAC 115
+FD + K+ +V+WT ++ + N A+ L++ ML+ + V PN F S L AC
Sbjct: 449 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 508
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAY 172
+ G L GR IH + R + E + + N L+DMY K G + R +FD
Sbjct: 509 ARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ------ 562
Query: 173 GNVALWNSMLSG----GKQVHAFCVKRGFEK-----EDVTLTSLIDMYLKCGEIDDGLAL 223
N W S+++G G+ A + +K + VT ++ G +D G+
Sbjct: 563 RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINY 622
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF------DQYSSWA 277
FN M +D G++ G +C +VD+ S L EA +L + W
Sbjct: 623 FNGM-NKDF----GVVPGAEHYAC-----MVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 672
Query: 278 A-----SAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMC 316
A Y NV L + + L N+ + TLLS+I+++ C
Sbjct: 673 ALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 717
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 191/662 (28%), Positives = 308/662 (46%), Gaps = 106/662 (16%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
+LH +K G Q + N+LL++YA ++ A KLFDE+ ++N +WT +++ +
Sbjct: 310 TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAG 369
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
L+ M G+ PN + S+VLK CSL +L LG+ +H + R ++ D VL
Sbjct: 370 SSEMVFNLFREMQAKGAC-PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLG 428
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
N++LD+Y+KC +LF+ + G+V WN M
Sbjct: 429 NSILDLYLKCKVFEYAERLFELMNE------GDVVSWNIM-------------------- 462
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
I YL+ G+++ L +F +P +DVVSW I+ G +C + AL +Y C
Sbjct: 463 ------IGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCG-YERHALEQLY--CM 513
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
V C G + T
Sbjct: 514 VEC-------------------------------------------------GTEFSAVT 524
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA------ 375
F+ AL +L + Q+HG+++ G++ D + S+L+++Y + G + A
Sbjct: 525 FSIALILASSLSHV--ELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRD 582
Query: 376 ----------LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
+ ++ PK +V+W ++ G +G FR M+ V+ +
Sbjct: 583 VPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTV 642
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
++++ C+ L G+ VHA+ K G + +SLIDMY K G +DD +F+ E
Sbjct: 643 TTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNE 702
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++V WT +I G +G+ AI F+EM+ + PNE+TFLGVL+AC HAGL+EE
Sbjct: 703 PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRY 762
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F MK Y + P +EH MVDL G+AG + I + ++W S L +C H
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHK 822
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
N ++ ++E LL +P DP YV+LSN+ A+ WD ++VR + G KK G SWI
Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWI 882
Query: 665 EV 666
++
Sbjct: 883 QL 884
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 201/479 (41%), Gaps = 98/479 (20%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +++ GK +H +++ G+ D+ GN++L +Y A +LF+ M ++
Sbjct: 397 LKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDV 456
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW M+ AY L+A + LD+ R
Sbjct: 457 VSWNIMIGAY--------------------------------LRAGDVEKSLDMFR---- 480
Query: 130 RITREKLEY-DTVLMNTLLDMYVKCGSLTRKLFDQY------SNWAASAYGNVALWNSML 182
+L Y D V NT++D ++CG L Y + ++A + + S L
Sbjct: 481 -----RLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSL 535
Query: 183 SG---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
S G+Q+H +K GF+ + +SL++MY KCG +D + +P
Sbjct: 536 SHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVP----------- 584
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+D+ N AR + + + S W SM+SGYV N +
Sbjct: 585 --------------LDVLRKGN----ARVSYKEPKAGIVS-------WGSMVSGYVWNGK 619
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
E+ + + + +D T T+ + AC N F VH + G+ +D VG
Sbjct: 620 YEDGLKTFRLMVRELVVVDIRTVTTIISACANAGIL--EFGRHVHAYVQKIGHRIDAYVG 677
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S+LID+Y++ G++ A +F + + ++V W+ +I G HG A LF +M+N
Sbjct: 678 SSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII 737
Query: 420 VNQFIISSVLKVCSCLASLRRGKQV-----HAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
N+ VL CS + G + A+C+ G E TS++D+Y + G +
Sbjct: 738 PNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEH----CTSMVDLYGRAGHL 792
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 26/259 (10%)
Query: 314 GMCIDSYTFTSALKACINLLNF---NSRFAL-QVHGLIVTSGYELDYIVGSNLIDLYARL 369
G I SY + +L +F NS L +H L V +G ++L+ LYA+
Sbjct: 278 GFSISSYFYPPLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKS 337
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
N+ A +LF +P+++ W+ LI G + G + + + LFR+M NQ+ +SSVL
Sbjct: 338 NNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVL 397
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K CS +L+ GK VHA+ ++ G + + + S++D+YLKC + LF+ M E DVV
Sbjct: 398 KCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVV 457
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I + G ++++ F+ RL ++ +W
Sbjct: 458 SWNIMIGAYLRAGDVEKSLDMFR-----RLPYKDVV----------------SWNTIVDG 496
Query: 550 KPEYGLEPH-LEHYYCMVD 567
+ G E H LE YCMV+
Sbjct: 497 LLQCGYERHALEQLYCMVE 515
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 122/276 (44%), Gaps = 40/276 (14%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA------------- 65
++ G+ LH ++K+G D F ++L+ MY ++ A + ++
Sbjct: 538 VELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSY 597
Query: 66 ---RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ IVSW +MV+ Y N + ++ + M+ V + + ++ AC+ +G L+
Sbjct: 598 KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRE-LVVVDIRTVTTIISACANAGILE 656
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
GR +H + + D + ++L+DMY K GSL D + + S N+ +W SM+
Sbjct: 657 FGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLD----DAWMVFRQSNEPNIVMWTSMI 712
Query: 183 SG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
SG G+ +HA + +G +VT +++ G I++G F M + +
Sbjct: 713 SGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCI 772
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ G C +++VD+Y L + +
Sbjct: 773 N-----PGVEHC-----TSMVDLYGRAGHLTKTKNF 798
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D+R + + C ++ G+ +H + K G D + G++L+ MY+ SL+DA +
Sbjct: 637 VDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMV 696
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F + NIV WT+M++ Y + + AI L+ ML G + PN + VL ACS +G
Sbjct: 697 FRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII-PNEVTFLGVLNACSHAG- 754
Query: 121 LDLGRLIHERITREKLEYDTVLMN-------TLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
LI E ++ D +N +++D+Y + G LT+ + N +
Sbjct: 755 -----LIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHL-- 807
Query: 174 NVALWNSMLS 183
++W S LS
Sbjct: 808 -TSVWKSFLS 816
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 188/646 (29%), Positives = 322/646 (49%), Gaps = 44/646 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+L +V LR C ++ G+ +H +++ G+S D GN L+ MY +++A +
Sbjct: 160 NLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVL 215
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM +++++SW M++ Y + +R M + G + P Y+ +L ACS DL
Sbjct: 216 REMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDG-LSPTKVTYATLLNACSSEEDL 274
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ IH + L+ D V+ + LL MY KCGSL D + N WN++
Sbjct: 275 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLE----DVKRSSCEVHERNTIAWNTI 330
Query: 182 LSG-GKQVHAFCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
+ + F R F++ + VT ++ + G+ L +++ +
Sbjct: 331 IGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQ--- 387
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ + IIV ++L MY+ C L ARK+F++ S N WNS++S
Sbjct: 388 LGFESIIVH---------NSLTAMYAKCGSLDAARKMFEEMPSR------NSVSWNSLMS 432
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
+ + + +A + G D T S L AC N++ +H ++V SG+
Sbjct: 433 AAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTK--QANAKEGSSIHQMVVESGF 490
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+ V + LI +YA+LG+ ++A +F + +++ V+W+ ++ + GLN A +F
Sbjct: 491 DKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWK 550
Query: 413 MINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEK--EDITLTSLIDMYLK 469
M + V + L CS LA L GK +H + + GF + + T+L++MY K
Sbjct: 551 MDVARDKVTYV---AALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGK 607
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + + +F M RDVV+WT +IV Q+ ++A+ + M Q +K +++ FL +
Sbjct: 608 CGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSI 667
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LS C H+GL+EE F SM +YG+ P LEHY C++D+LG+AG D AE+L+ +P +
Sbjct: 668 LSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRS 727
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D +W ++L AC H N + A ++ P P+ YV+LSN+Y
Sbjct: 728 DSKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 773
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/665 (24%), Positives = 284/665 (42%), Gaps = 105/665 (15%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN-WAIRLYNHMLEYGSVEPNG 105
MY L+ A ++F ++ ++ +W+ ++ AY +++ A+ LY M G V P+
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEG-VRPDS 59
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS-------LTR 158
+ LKAC++ G L GR +H I LE D N L++MY KC S +R
Sbjct: 60 VTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSR 119
Query: 159 KLFDQYSNWAASAYGNVALWNSM-------------------------------LSGGKQ 187
+W S GN A + + L+ G+Q
Sbjct: 120 MESPNVVSW-TSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTDGRQ 178
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------ 241
VH + ++ G + +L+DMY K G +D+ + MP+RDV+SW +I G
Sbjct: 179 VHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGD 238
Query: 242 CFE-CSCF-------------TLSALVDMYSNCNVLCEARKLF-----------DQYSSW 276
C E C T + L++ S+ L E + + + S+
Sbjct: 239 CKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSF 298
Query: 277 AASAYG------------------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
YG N WN++I Y + +A+ + G+ D
Sbjct: 299 LLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKAD 358
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+ TF L C + + L H I G+E IV ++L +YA+ G++ +A ++
Sbjct: 359 AVTFVLMLGTCSSPAHLAQGILL--HDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKM 415
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F +P ++ V+W+ L+ +HG ++ A+ F+ M ++ S+L C+ A+
Sbjct: 416 FEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANA 475
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+ G +H V+ GF+K +LI MY K G+ + +F M ER+ VSW I+
Sbjct: 476 KEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAY 535
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH-AGLVEEAWTIFTSMKPEYGLEP 557
+ G ++A+ F +M +R +++T++ L AC AG + I M ++G
Sbjct: 536 VEKGLNRDAVEMFWKMDVAR---DKVTYVAALDACSGLAGGLAHGKLIHGYM-LDHGFSN 591
Query: 558 HLEHY--YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT----KLVS 611
L+ +V++ G+ G +A ++ M + D W S++ A H+ KLV
Sbjct: 592 RLDTVAATALVNMYGKCGSLQEARKIFDGMLHR-DVVTWTSLIVAYAQHSEIEQALKLVK 650
Query: 612 IIAEQ 616
I+ ++
Sbjct: 651 IMEQE 655
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 199/707 (28%), Positives = 330/707 (46%), Gaps = 115/707 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
++ CG GK LH ++ G DI G +L+ MY ++ S+ D K+F+ M ++N
Sbjct: 62 IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRN 121
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+WT+++T Y + L+ M G V PN F +S+VL + G +DLG+ +H
Sbjct: 122 VVTWTSLLTGYIQAGVLLDVMSLFFRMRAEG-VWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + + N+L++MY KCG + R +F + ++ WN++++G
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMET------RDMVSWNTLMAGLV 234
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
+Q+H+ +K GF
Sbjct: 235 LNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGN 294
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+T+L+D Y K G++D L +F M ++VVSWT +I GC +
Sbjct: 295 VMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQ----------------- 337
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
G++ L A L S + G+ + T
Sbjct: 338 -------------------NGDIPL----------------AAALFSRMREDGVAPNDLT 362
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+++ L + F Q+H ++ + YE VG+ L+ Y++L + + AL +F
Sbjct: 363 YSTILTVS------EASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKM 416
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC-SCLASLRR 440
+ +KDVV+WS ++ + G + A F M N+F ISS + C S A +
Sbjct: 417 IDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDL 476
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q HA +K ++L+ MY + G I++ +F+ +RD++SW ++ G Q
Sbjct: 477 GRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQ 536
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G +++A+ F++M + + +TFL V+ C HAGLVEE F M +YG+ P ++
Sbjct: 537 HGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMD 596
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY CMVDL +AG D+ LI MPF TIW ++L AC H N +L + AE+LL+
Sbjct: 597 HYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSL 656
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
P D + YV+LSN+Y+ G W +VRK K K+AG SWI++
Sbjct: 657 EPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQI 703
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 12/325 (3%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLYARLGNV 372
G C+ +K C ++ + Q+H L V G++ D VG++L+D+Y +V
Sbjct: 50 GRCVGGGALLGIIKICGSVPD--RVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSV 107
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
++F + K++VV W+ L+ G + G+ LF M N F SSVL +
Sbjct: 108 LDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMV 167
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ + G+ VHA +K G SL++MY KCG +++ +F M RD+VSW
Sbjct: 168 ASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWN 227
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAWTIFTSM 549
++ G NGR EA+ F + S E T+ V++ C +H GL + S
Sbjct: 228 TLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQ----LHSS 283
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G + ++D +AG D A + M + W +M+ C + + L
Sbjct: 284 VLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPL 343
Query: 610 VSIIAEQLL--ATSPEDPSKYVMLS 632
+ + ++ +P D + +L+
Sbjct: 344 AAALFSRMREDGVAPNDLTYSTILT 368
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 312/668 (46%), Gaps = 117/668 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
+ HC + K+ L ++ S + F + L + +L A LFD+M ++
Sbjct: 1 MEHCHHQPHAKRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERD 60
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW M++ Y N A +++ M S+ NG
Sbjct: 61 VVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNG----------------------- 97
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+L YV+ G + R+LF+ ++W + WN M+ G
Sbjct: 98 -----------------MLAAYVQNGRIEDARRLFESKADW------ELISWNCMMGGYV 134
Query: 187 QVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ + RG E+++V+ ++I Y + GE+ + LF P RDV +WT ++ G
Sbjct: 135 KRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSG 194
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y +L EAR++FD N WN++I+GYV ++ +
Sbjct: 195 ---------------YVQNGMLDEARRVFDGMPE------KNSVSWNAIIAGYVQCKRMD 233
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A L + C N+ ++N+
Sbjct: 234 QARELFEAM-----------------PCQNVSSWNT------------------------ 252
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+I YA+ G++ A F R+P++D ++W+ +I G + G A LF +M + +N
Sbjct: 253 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 312
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ +S L C+ +A+L GKQVH VK G E +L+ MY KCG IDD +F+
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 372
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ E++VVSW +I G ++G KEA+ F+ M ++ + P+++T +GVLSAC H GLV++
Sbjct: 373 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F SM +YG+ + +HY CM+DLLG+AG DDA+ L+ MPF+PD W ++L A
Sbjct: 433 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 492
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AG 660
H NT+L A+ + P++ YV+LSN+YA G W + ++R + G KK G
Sbjct: 493 RIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPG 552
Query: 661 MSWIEVSS 668
SW+EV +
Sbjct: 553 YSWVEVQN 560
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 291/604 (48%), Gaps = 64/604 (10%)
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
++T +V N A RL +HM + + F+++ +L + G L + + ++
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW---NSMLSGG 185
+ L+ D N LL Y K GS+ + FD+ + +Y NS
Sbjct: 84 M----LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++ + GFE + T+ S+++ + ++ G + IIV F
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHG-----------SIIVRNFLG 188
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F +AL DMY+ C + +AR LFD + N+ WN MISGY N Q E+ I
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTK------KNLVSWNLMISGYAKNGQPEKCIG 242
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
LL + SG+ D + S +I
Sbjct: 243 LLHQMR-------------------------------------LSGHMPDQVTMSTIIAA 265
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G V A +F +KD+V W+ +++G K+G A LLF +M+ + + + + +
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SSV+ C+ LASL G+ VH + G + ++LIDMY KCG IDD ++F MP
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+VVSW +IVGC QNG K+A+ F+ M+Q + KP+ +TF+G+LSAC H +E+
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY 445
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F S+ ++G+ P L+HY CMV+LLG+ G + A LI M PD IW+++L C T
Sbjct: 446 FDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
+ + A L P Y+MLSN+YA++G W ++ VR K KK AG SWI
Sbjct: 506 DIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWI 565
Query: 665 EVSS 668
E+ +
Sbjct: 566 EIDN 569
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 154/650 (23%), Positives = 254/650 (39%), Gaps = 156/650 (24%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQ--DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
C + I Q K L + ++ L Q D F N LL +YA F L DA LFD+M +++I
Sbjct: 32 CVRTNEINQAKRLQSHM-EHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIF 90
Query: 71 SWTTMVTAY-------------------------------TSNKRPNWAIRLYNHMLEYG 99
SW +++AY + N P ++ L+ M G
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREG 150
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
EP + ++L A + DL G+ IH I + + N L DMY KCG +
Sbjct: 151 -FEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQ----------VHAFCVKRGFEKEDVTLTSL 207
R LFD + N+ WN M+SG + +H + G + VT++++
Sbjct: 210 RWLFDCLTK------KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS-GHMPDQVTMSTI 262
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSC 247
I Y +CG +D+ +F+ E+D+V WT ++VG E
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 248 FTLS-----------------------------------ALVDMYSNCNVLCEARKLFDQ 272
+TLS AL+DMYS C + +AR +F+
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI-- 330
+ NV WN+MI G N +++A+ L ++ D+ TF L AC+
Sbjct: 383 MPT------RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 331 NLLNFNSRFALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KD 386
N + + + HG+ T LD+ + +++L R G ++ A+ L + D
Sbjct: 437 NWIEQGQEYFDSITNQHGMTPT----LDHY--ACMVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--------NQFIISSVLKVCSCLASL 438
+ WS L+ C+ G A + R + + + N + K + + +L
Sbjct: 491 FLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNL 550
Query: 439 RRGKQVHAFC----------VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+ K V F V R F ED T D+Y K + L F P ++
Sbjct: 551 MKSKNVKKFAGFSWIEIDNEVHR-FTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNL 609
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL----KPNEITFLGVLSACR 534
V + G++ + K +I + E + KPN I+ + ++ R
Sbjct: 610 V-----LHDVGEDEKFK-SICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 323/655 (49%), Gaps = 36/655 (5%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G LH ++ G D+F GN L++ YA DA ++FDEM +++VSW ++V+++
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+NK + A + M+ G V N +V+ AC + + G +H + + L+
Sbjct: 154 ANKMFDDARQALLSMMRSG-VPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIV 212
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGNVALWNSMLSGGKQVHAF 191
L N L+DMY K G + + K+F+ N A + N L+ +L+ + +
Sbjct: 213 NLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMS-- 270
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
+RGF +TL+SL+ ++ G D G + + +R E F +
Sbjct: 271 --ERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKR-----------AMELDIFVAN 317
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+LVDMY+ L +A +F++ NV WN+MI+ V N EA L+ +
Sbjct: 318 SLVDMYAKFGSLEKACAVFEKIE------VRNVVSWNAMIANLVQNGAESEAFGLVIKMQ 371
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
G C +S T + L AC + + + Q+H + +G D + + LID+YA+ G
Sbjct: 372 KDGECPNSITLVNLLPACSRMASLKT--GKQIHAWSIRTGLMFDLFISNALIDMYAKCGQ 429
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
++ A +F L +KD V+++ LI+G ++ + + LF+ + + + + L
Sbjct: 430 LRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTA 488
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ L+S ++GK++H V+R +L+ +Y K G +D +F + E+DV SW
Sbjct: 489 CTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASW 548
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I+G G +G+ A F M + + ++++ VLS C H GLVE F+ M
Sbjct: 549 NNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLA 608
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+ LEP HY CMVDLLG++G ++ ++I +MPF + +W ++L AC H N +L
Sbjct: 609 Q-NLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQ 667
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
A+ L PE Y +L N+YA G W+ K+R K + +K SW++
Sbjct: 668 YAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQ 722
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 264/566 (46%), Gaps = 48/566 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+++ +V + CG + G +H ++K GL + GN L+ MY F + + K+
Sbjct: 175 VNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKV 234
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +N VSW + + + + + L+ M E G + P S++L A G
Sbjct: 235 FEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM-PGSITLSSLLPALVELGY 293
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALW 178
DLGR +H + +E D + N+L+DMY K GSL + +F++ NV W
Sbjct: 294 FDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIE------VRNVVSW 347
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--------- 229
N+M+ A V+ G E E L +I M K GE + + L N +P
Sbjct: 348 NAMI-------ANLVQNGAESEAFGL--VIKMQ-KDGECPNSITLVNLLPACSRMASLKT 397
Query: 230 -RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ + +W+ I F +AL+DMY+ C L A+ +FD S +V+ +N
Sbjct: 398 GKQIHAWS--IRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD------LSEKDDVS-YN 448
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
++I GY + + E++ L + S G+ D+ +F AL AC NL +F ++HG++V
Sbjct: 449 TLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQ--GKEIHGVLV 506
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ + L+ LY + G + +A ++F+R+ +KDV +W+ +IMG HG A+
Sbjct: 507 RRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFH 566
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M + + +VL VCS + RGK+ + + + E + + ++D+
Sbjct: 567 LFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLG 626
Query: 469 KCGEIDDGLALFKFMP---ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+ G++ + + + MP DV W ++ C +G + A + + LKP
Sbjct: 627 RSGQLTESVEIILDMPFHANSDV--WGALLGACRIHGNIELAQYAADHLFE--LKPEHSG 682
Query: 526 FLGVL-SACRHAGLVEEAWTIFTSMK 550
+ VL + AG EA I T MK
Sbjct: 683 YYSVLRNMYAEAGRWNEAHKIRTLMK 708
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 245/541 (45%), Gaps = 32/541 (5%)
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
W ++ A +S P A+ +YNHML G S + F ++ A + G +H
Sbjct: 42 WNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAA 101
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA---LWNSMLSGG 185
R D NTL+ Y CG R++FD+ ++ ++ L N M
Sbjct: 102 ALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDA 161
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCG-EIDDGLALFNFMPERDVVSWTGIIVGCFE 244
+Q ++ G V + SL+ + CG E + G L G+++
Sbjct: 162 RQALLSMMRSGVP---VNVASLVSVVPACGVEQEGGFGL----------GVHGLVLKTGL 208
Query: 245 CSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S L +ALVDMY + + K+F+ N WNS I ++ +
Sbjct: 209 DSIVNLGNALVDMYGKFGHVEASMKVFEGMPER------NEVSWNSAIGCFLNAGLYGDV 262
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + G S T +S L A + L F+ +VHG + ELD V ++L+
Sbjct: 263 LALFRGMSERGFMPGSITLSSLLPALVELGYFD--LGREVHGYSIKRAMELDIFVANSLV 320
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+YA+ G+++ A +F ++ ++VV+W+ +I ++G S A+ L M + N
Sbjct: 321 DMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSI 380
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ ++L CS +ASL+ GKQ+HA+ ++ G + +LIDMY KCG++ ++F +
Sbjct: 381 TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-L 439
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
E+D VS+ +I+G Q+ + E++ F+++ ++ + I+F+G L+AC + ++
Sbjct: 440 SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGK 499
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
I + L H ++ L + G D A ++ + K D W +M+
Sbjct: 500 EIHGVLVRRL-LSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEK-DVASWNNMIMGYGM 557
Query: 604 H 604
H
Sbjct: 558 H 558
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 6/282 (2%)
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y+ + L +R L + SA+ LWNS+ EA+ + +H+ SG+
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAF----LWNSLSRALSSASLPTEALLVYNHMLRSGVS 71
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D TF AL A + L++H + SG+ D G+ L+ YA G+ A
Sbjct: 72 PDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDAR 131
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F +P +DVV+W+ L+ + + A M+ S VN + SV+ C
Sbjct: 132 RVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQ 191
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
G VH +K G + +L+DMY K G ++ + +F+ MPER+ VSW I
Sbjct: 192 EGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAI- 250
Query: 497 GCGQN-GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
GC N G + +A F+ M + P IT +L A G
Sbjct: 251 GCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELG 292
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 184/654 (28%), Positives = 320/654 (48%), Gaps = 63/654 (9%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D F N ++ MY S DA ++FD + ++N SW+ +V Y N A+ +Y M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + + S+VL AC+ D++ GR++ + E D V+ +L+ ++ KCG L
Sbjct: 61 R-KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
+++ SM G ++ +++T++I Y++ G+
Sbjct: 120 EEA---------------ESVFRSM--------------GAMRDIISVTAMIGAYVRHGK 150
Query: 217 IDDGLALFNFMP----ERDVVSWTGIIVGC----------------FECSCF----TLSA 252
D L + M E D ++ I+ C E F +A
Sbjct: 151 NDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNA 210
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ MY+ C L +++ LF +V WN+MI+ Y L +++A +L + +
Sbjct: 211 LITMYAKCGSLKDSKSLF------LTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCT 264
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G D YTF+S L AC + L V I G++ D+ + +NLI ++ R G++
Sbjct: 265 LGHTPDIYTFSSILGACASPKRLEDGRMLHVR--ITARGFDRDFAMQNNLISMFTRCGSL 322
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+SA F+ + KK++ AW+ ++ + A L+++M+ ++F SSV+ C
Sbjct: 323 ESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSC 382
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ L +LR GK +H GFEK+ I T+L++MY KCG + D F + +DVVSW+
Sbjct: 383 ASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWS 442
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I Q+G A+EA+ M + NE+T VL AC H G + E F + +
Sbjct: 443 AMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQD 502
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G+E E+ +DLLG+AG +AE ++ MPFK ++L C+ H + +
Sbjct: 503 FGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKA 562
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ ++++A PE+P YV+L+N+YA G WD ++K+R+ +K G +++ G S IE
Sbjct: 563 LTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIE 616
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 239/534 (44%), Gaps = 38/534 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L C + +++G+ + + + G +D+ +L+ ++A L +A +
Sbjct: 66 IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESV 125
Query: 61 FDEM-ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F M A ++I+S T M+ AY + + + A+ Y M G +EP+ F Y+A+L ACS
Sbjct: 126 FRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQG-LEPDAFTYAAILGACSSPD 184
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L G+ IH+ I K + + N L+ MY KCGSL D S + +V WN
Sbjct: 185 FLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLK----DSKSLFLTMDVKDVVSWN 240
Query: 180 SMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++ G AF + G + T +S++ ++DG L + R
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
F+ + L+ M++ C L AR+ F YS + WN+M
Sbjct: 301 G-----------FDRDFAMQNNLISMFTRCGSLESARRYF--YSIEKK----ELGAWNTM 343
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++ Y ++ ++A+ L ++ G D +TF+S + +C +L R +H +
Sbjct: 344 LAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL--REGKFIHECSTSC 401
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G+E D I+G+ L+++YA+ G++ A + F + KDVV+WS +I +HG A L
Sbjct: 402 GFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELS 461
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLK 469
M N+ SSVL CS L G G E+++ ID+ +
Sbjct: 462 HLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR 521
Query: 470 CGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
G + + + MP + V+ ++ GC +G + A + ++ L+P
Sbjct: 522 AGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVA--LEPE 573
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/622 (29%), Positives = 307/622 (49%), Gaps = 34/622 (5%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
++ I ++ N+L+S Y L A K+FD + K+++SW +MV AY+ +
Sbjct: 28 TIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHG 87
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+ L+ M VEP+ Y+++L ACS L+LG+ +H R++R + + D L
Sbjct: 88 HGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALA 143
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF 197
L++MY KCG L R++FD + S WN+M+SG G+ A +
Sbjct: 144 AALINMYSKCGVLESARRVFDGIQSVDPSP------WNAMISGLVQHGRAREALGLFERM 197
Query: 198 EKEDVTL--TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ E V + S + + C ++D L + + S G+ + +A+ +
Sbjct: 198 KAESVRIDKVSYLTILSACCALED---LHEGIRIHEHASACGM-----DKDLVVETAVFN 249
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C + ARK+FD + NV WNSMI+ Y + + EA+ L + G+
Sbjct: 250 MYSKCRQVDLARKMFDGMNEKT-----NVVSWNSMIAAYAQSGRGREALELYELMKEEGV 304
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
D T+ AL AC + S ++H I S D + + ++++YA+ G +++A
Sbjct: 305 QPDDITYAGALGACTSY--GGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETA 362
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ F ++ +K+ V WS ++ + G + A L+ M++ ++ ++ L CS +
Sbjct: 363 MSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRI 422
Query: 436 ASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+L+ GK +H+ + SL++MY KCG + +F + RD SW I
Sbjct: 423 GALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTI 482
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
IVG +G E ++ EM+Q + P+ +TF VL AC HAGL++ + F SM +Y
Sbjct: 483 IVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDYC 542
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
++P L+HY C+VD+L +AG +AE L MPF P W ++L AC+ H TK A
Sbjct: 543 IKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEAA 602
Query: 615 EQLLATSPEDPSKYVMLSNVYA 636
LL E S YV+LSN+ A
Sbjct: 603 RSLLELGFECSSSYVLLSNLVA 624
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 178/407 (43%), Gaps = 41/407 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-N 68
L C + +G +H G+ +D+ + +MY+ ++ A K+FD M K N
Sbjct: 213 LSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTN 272
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +M+ AY + R A+ LY M E G V+P+ Y+ L AC+ G G IH
Sbjct: 273 VVSWNSMIAAYAQSGRGREALELYELMKEEG-VQPDDITYAGALGACTSYGGSAKGAEIH 331
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ- 187
RIT K+ D L +++MY KCG L + S + N W++M+ Q
Sbjct: 332 SRITESKIRTDVFLDTAIVNMYAKCGELETAM----SYFEKMRRKNAVTWSAMVGAFIQQ 387
Query: 188 --------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
++ V GF+ ++TL + + G + +G A+ + + T +
Sbjct: 388 GYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSR------IQATETL 441
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
C F ++L++MY+ C L A +F + + WN++I G+ +
Sbjct: 442 QNCL----FLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFS------WNTIIVGHAHHGD 491
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYI 357
+E ++L + G+ D TF L AC LL+ + H L +T Y + +
Sbjct: 492 VDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRG-----RSHFLSMTGDYCIKPM 546
Query: 358 VG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ L+D+ +R G + A L +P V W+ L+ C HG
Sbjct: 547 LDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHG 593
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 120/557 (21%), Positives = 213/557 (38%), Gaps = 117/557 (21%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ GK +H R+ + D L++MY+ L A ++FD + + W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M++ + R A+ L+ M + SV + Y +L AC DL G IHE +
Sbjct: 175 NAMISGLVQHGRAREALGLFERM-KAESVRIDKVSYLTILSACCALEDLHEGIRIHEHAS 233
Query: 133 REKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ--- 187
++ D V+ + +MY KC L RK+FD + NV WNSM++ Q
Sbjct: 234 ACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKT-----NVVSWNSMIAAYAQSGR 288
Query: 188 ------VHAFCVKRGFEKEDVTL-----------------------------------TS 206
++ + G + +D+T T+
Sbjct: 289 GREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTA 348
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+++MY KCGE++ ++ F M ++ V+W+ +VG F
Sbjct: 349 IVNMYAKCGELETAMSYFEKMRRKNAVTWSA-MVGAF----------------------- 384
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ GY + EA+ L + S G T AL
Sbjct: 385 -----------------------IQQGY-----DREALDLYLRMVSEGFQPSEITLAGAL 416
Query: 327 KACINLLNFNSRFALQVHGLI-VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
AC + A +H I T + + ++L+++YA+ G + A +F L ++
Sbjct: 417 AACSRIGALQEGKA--IHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRR 474
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-- 443
D +W+ +I+G HG L +M+ D + + VL CS L RG+
Sbjct: 475 DSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHF 534
Query: 444 ---VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCG 499
+C+K + + L+D+ + G + AL MP V+WT ++ C
Sbjct: 535 LSMTGDYCIKPMLDHYEC----LVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACK 590
Query: 500 QNGRAKEAIAYFQEMIQ 516
+G K + + +++
Sbjct: 591 LHGETKRGVEAARSLLE 607
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +G +H RI + + D+F +++MYA L A F++M RKN
Sbjct: 314 ALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKN 373
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+W+ MV A+ A+ LY M+ G +P+ + L ACS G L G+ IH
Sbjct: 374 AVTWSAMVGAFIQQGYDREALDLYLRMVSEG-FQPSEITLAGALAACSRIGALQEGKAIH 432
Query: 129 ERI-TREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
RI E L+ L N+LL+MY KCG ++ +F + + WN+++ G
Sbjct: 433 SRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFS------WNTIIVGH 486
Query: 186 KQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
+H V+ G + + VT ++ G +D G + F
Sbjct: 487 AHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHF 534
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 202/691 (29%), Positives = 339/691 (49%), Gaps = 49/691 (7%)
Query: 1 MDLRRIVEALRHCGQR-RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDA 57
M + +E LR R+ + G +LH +K G + N+L++ Y L A
Sbjct: 11 MSHAQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAA 70
Query: 58 HKLFDEMAR--KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE-YGSVEPNGFMYSAVLKA 114
+F ++ +++ SW +++ S +P A+ + M+ +V P ++AV A
Sbjct: 71 FAVFADIPAGLRDVASWNSLLNPL-SRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTA 129
Query: 115 CSLSGDLDLGRLIHE---RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAA 169
+ G + H ++ + + LL+MY K G+++ R++FDQ
Sbjct: 130 AARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP---- 185
Query: 170 SAYGNVALWNSMLSG---GK-QVHAFCVKR------GFEKEDVTLTSLIDMYLKCGEIDD 219
+ N W +M+SG GK AF + R EK + T+++ +
Sbjct: 186 --HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLI 243
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
G+ L + + +V + + ++LV MY+ + A +F +S
Sbjct: 244 GVQLHGLVLKDGLVGFVSV-----------ENSLVTMYAKAECMDAAMAVF------GSS 286
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
N W++MI+GY N + + A T+ +HS+G +TF L A ++
Sbjct: 287 KERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGAL--VV 344
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCT 398
Q HGL+V G+E V S L+D+YA+ G A + FH+L DVV W+ +I G
Sbjct: 345 GKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHV 404
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G + A +L+ M + ++SVL+ C+CLA+L GKQ+HA +K GF
Sbjct: 405 QNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGS 464
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
T+L MY KCG ++D + +F+ MP+RD++SW II G Q+GR ++A+ F+EM
Sbjct: 465 VGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEG 524
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ P+ ITF+ VL AC H GLV+ W F +M +YGL P L+HY C+VD+L +AG +A
Sbjct: 525 IAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEA 584
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+ I + +W +L AC + + + + EQL+ ED S Y++LSN+YA
Sbjct: 585 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQ 644
Query: 639 GMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
W+ + +VR + G K G SW+E+++
Sbjct: 645 RKWNDVERVRHLMRLRGVSKDPGCSWVELNN 675
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/725 (26%), Positives = 334/725 (46%), Gaps = 116/725 (16%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C S+ GK +H ++++ G D+ +++MY SL DA ++F+ M N
Sbjct: 210 AISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPN 269
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSW +V A T + A+ + M G P+ + +L ACS L G L++
Sbjct: 270 TVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLY 329
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL-WNSMLSGGKQ 187
E I + + ++ N ++ MY CG + D + + ++ A+ WN+++SG Q
Sbjct: 330 ECILQCGYDTHLIVGNCIMTMYSSCGRI-----DNAAAFFSTMVERDAISWNTIISGHAQ 384
Query: 188 -------VHAF----------------------------------CVKRGFEKEDVTLTS 206
VH F V+ G E + +++
Sbjct: 385 AGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSA 444
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGII------------VGC------------ 242
LI+M+ + G + + +LF+ M +RD+V WT II +GC
Sbjct: 445 LINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGN 504
Query: 243 -------------------------------FECSCFTLSALVDMYSNCNVLCEARKLFD 271
F S +AL++MY+ C L EA +F
Sbjct: 505 DFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFH 564
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
Q N+ WN++ + YV ++ EA+ L + G+ D +F + L C
Sbjct: 565 QCGK-------NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC-- 615
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
++ ++H +++ +G E D+IV + L+++Y ++ A +F R+ +D+V+W+
Sbjct: 616 ---SSASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWN 672
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV--CSCLASLRRGKQVHAFCV 449
+I G +HGL+ A +F+ M ++ +VL S +SL++ + V
Sbjct: 673 AMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLIS 732
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+G+E + I +++ M+ + G + + F+ + ERD SW I+ Q+G ++A+
Sbjct: 733 DQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALK 792
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ M Q +P+ IT + VLSAC H GL+EE + FTSM E+G+ EHY C+VDLL
Sbjct: 793 LFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLL 852
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+AG D AE+L+ +MP +W ++L AC+ + K +AE+++ P P+ YV
Sbjct: 853 ARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYV 912
Query: 630 MLSNV 634
+LS+V
Sbjct: 913 VLSSV 917
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 176/710 (24%), Positives = 310/710 (43%), Gaps = 136/710 (19%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C + +GK LH +++ GL +++ G +L+ MY + DA ++FD++A
Sbjct: 107 VTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLAL 166
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VSWT+M+ Y + R A+ L++ M G V PN Y+ + AC+ + G+L
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSG-VLPNRITYATAISACAHVESMADGKL 225
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH ++ + E D V+ +++MY KCGSL R++F++ + N WN++++
Sbjct: 226 IHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMP------HPNTVSWNAIVAA 279
Query: 185 GKQVHAFCVKR-----------GFEKEDVTLTSLID------------------------ 209
Q H CV+ G + VT ++++
Sbjct: 280 CTQ-HGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYD 338
Query: 210 -----------MYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFEC------- 245
MY CG ID+ A F+ M ERD +SW II G C E
Sbjct: 339 THLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRM 398
Query: 246 -------SCFTLSALVD--------------------------------MYSNCNVLCEA 266
FT +++D M+S + EA
Sbjct: 399 LAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREA 458
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R LFD ++ +W S+IS YV + +++A+ + G+ + +T +AL
Sbjct: 459 RSLFDDMKDR------DIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTAL 512
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC +L + +H + G+ VG+ LI++YA+ G ++ A +FH+ K+
Sbjct: 513 NACASLTALSE--GKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQC-GKN 569
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ + + A LF++M ++ +VL CS S G ++H
Sbjct: 570 LVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCS---SASEGSKIHN 626
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ G E + I T+L++MY +D+ +F M RD+VSW +I G ++G ++E
Sbjct: 627 ILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSRE 686
Query: 507 AIAYFQEMIQSRLKPNEITFLGVL--------SACRHAGLVEEAWTIFTSMKPEYGLEPH 558
AI FQ M + P++I+F+ VL S+ + A LVE+ + + G E
Sbjct: 687 AIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEK-------LISDQGYETD 739
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+V + G++G +A + E + D W ++ A H +
Sbjct: 740 TIVGNAIVSMFGRSGRLAEARRAF-ERIRERDAASWNVIVTAHAQHGEVE 788
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/721 (23%), Positives = 307/721 (42%), Gaps = 115/721 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ +I +G+ +H R+ +D N + MY + DA +F + + VSW
Sbjct: 12 CAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSW 71
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++ A+ + + A +++ M G + P+ + VL C+ +GDL G+L+H +
Sbjct: 72 NSLLAAFARDGQFQQAFQIFQRMKLQG-LAPDRITFVTVLDGCTATGDLSRGKLLHGFVL 130
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM--------- 181
LE + ++ +L+ MY KCG + R++FD+ A +V W SM
Sbjct: 131 EAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL------ALQDVVSWTSMIMTYVQHDR 184
Query: 182 -----------------------------------LSGGKQVHAFCVKRGFEKEDVTLTS 206
++ GK +H+ ++ GFE + V +
Sbjct: 185 CVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCA 244
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC------------------- 247
+++MY KCG ++D +F MP + VSW I+ C + C
Sbjct: 245 IVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTP 304
Query: 248 --FTLSALVDMYSNCNVLCEARKLFD-------------------QYSSWA----ASAYG 282
T +++ S+ L L++ YSS A+A+
Sbjct: 305 DKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFF 364
Query: 283 NVALWNSMI------SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ + I SG+ +EA+ L + + G+ D +TF S + +
Sbjct: 365 STMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQE-- 422
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
A + L+V SG ELD + S LI++++R GNV+ A LF + +D+V W+ +I
Sbjct: 423 ---AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISS 479
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+HG + A R M N F + + L C+ L +L GK +H+ ++RGF
Sbjct: 480 YVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAAS 539
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+LI+MY KCG +++ +F +++VSW I Q + +EA+ FQEM
Sbjct: 540 PAVGNALINMYAKCGCLEEADLVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQL 598
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
LK ++++F+ VL+ C A + I E G+E ++++ + D
Sbjct: 599 EGLKADKVSFVTVLNGCSSASEGSKIHNILL----ETGMESDHIVSTALLNMYTASKSLD 654
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+A ++ + M F+ D W +M+ H + + + + L D +V + N +
Sbjct: 655 EASRIFSRMEFR-DIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAF 713
Query: 636 A 636
+
Sbjct: 714 S 714
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/545 (22%), Positives = 235/545 (43%), Gaps = 108/545 (19%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
+ A+L C+ + GR +H R+ + D ++ N + MY KCG + D + +
Sbjct: 5 FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVE----DAVTVF 60
Query: 168 AASAYGNVALWNSM--------------------------------------------LS 183
+ + + WNS+ LS
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
GK +H F ++ G E+ + TSLI MY KCG ++D +F+ + +DVVSWT +I+
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIM--- 177
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
YV +++ EA
Sbjct: 178 -------------------------------------------------TYVQHDRCVEA 188
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + SG+ + T+ +A+ AC ++ + +H ++ G+E D +V ++
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMAD--GKLIHSQVLEDGFESDVVVSCAIV 246
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQ 422
++Y + G+++ A E+F R+P + V+W+ ++ CT+HG A F+ M + ++
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDK 306
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++L CS A+L G+ ++ ++ G++ I ++ MY CG ID+ A F
Sbjct: 307 VTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M ERD +SW II G Q G EA+ F+ M+ + P++ TF+ ++ ++EA
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDG---TARMQEA 423
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
I + + E G+E + ++++ + G +A L +M + D +W S++ +
Sbjct: 424 -KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDR-DIVMWTSIISSYV 481
Query: 603 THNNT 607
H ++
Sbjct: 482 QHGSS 486
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 179/421 (42%), Gaps = 65/421 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL C ++ +GK +H I+ G + GN L++MYA L +A +F +
Sbjct: 508 LVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG 567
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN+VSW T+ AY + A++L+ M G ++ + + VL CS + + G
Sbjct: 568 -KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG-LKADKVSFVTVLNGCSSASE---GS 622
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSMLSG 184
IH + +E D ++ LL+MY SL D+ S ++ + ++ WN+M++
Sbjct: 623 KIHNILLETGMESDHIVSTALLNMYTASKSL-----DEASRIFSRMEFRDIVSWNAMIA- 676
Query: 185 GKQVHAFCVK----------RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
GK H + G + ++ ++++ + G L + + ++S
Sbjct: 677 GKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAF--SGSSPSSLKQARLVEK--LIS 732
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
G +E +A+V M+ L EAR+ F++ A++ WN +++ +
Sbjct: 733 DQG-----YETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAAS------WNVIVTAH 781
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-- 352
+ + E+A+ L + DS T S L AC HG ++ GY
Sbjct: 782 AQHGEVEQALKLFRRMQQESSRPDSITLVSVLSAC-------------SHGGLIEEGYYH 828
Query: 353 ------ELDYIVGSN-----LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
E I GS ++DL AR G + A EL ++P V W L+ C
Sbjct: 829 FTSMGREFG-IAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQ 887
Query: 401 G 401
G
Sbjct: 888 G 888
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 312/635 (49%), Gaps = 93/635 (14%)
Query: 51 FTSLNDAHKLFDEMARK------NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN 104
+ S+ND + RK N+ M+T + + R A RL++ M E P+
Sbjct: 28 YHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMRE-----PD 82
Query: 105 GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD 162
++ V+ G ++ R + +R+ +K + V ++ Y++ ++ KLF+
Sbjct: 83 VITWTTVISGYIKCGMIEEARRLFDRVDAKK---NVVTWTAMVGGYIRSNKISDAEKLFN 139
Query: 163 QYSNWAASAYGNVALWNSMLSGGKQ-----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
+ N NV WN+M+ G Q + ++ E+ V+ +++ M +CG I
Sbjct: 140 EMPN------KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRI 193
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
++ LF+ MPERDV+SWT +I G S + EAR LFD+
Sbjct: 194 EEARRLFDRMPERDVISWTAMIAGL---------------SKNGRIDEARLLFDRMPE-- 236
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
NV WN+MI+GY N + +EA+ L + +L ++N+
Sbjct: 237 ----RNVVSWNAMITGYAQNLRLDEALDLFERMPER-----------------DLPSWNT 275
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+ GLI G+++ A +LF+ +PKK+V++W+ +I GC
Sbjct: 276 ----MITGLIQN--------------------GDLRRARKLFNEMPKKNVISWTTMITGC 311
Query: 398 TKHGLNSLAYLLFRDMINSN-QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ G + A +F M+++N NQ SVL CS LA L G+QVH K ++
Sbjct: 312 VQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDS 371
Query: 457 DITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+++LI+MY KCGE+ +F +RD+VSW GII +G KEAI +F+EM
Sbjct: 372 TFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEM 431
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+S KP+++T++G+LSAC HAGLVEE F + + + +HY C+VDL G+AG
Sbjct: 432 RKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGR 491
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+A I + KP +W ++L C H N K+ A++LL PE+ Y++LSN+
Sbjct: 492 LKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNI 551
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YA+ G W ++VR K G +K+ G SWIEV +
Sbjct: 552 YASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGN 586
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 245/580 (42%), Gaps = 136/580 (23%)
Query: 1 MDLRRIVEALRH---------------CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLL 45
M+ RR+ + +R CG I++ + L R+ +++ T ++
Sbjct: 69 MEARRLFDEMREPDVITWTTVISGYIKCGM---IEEARRLFDRV---DAKKNVVTWTAMV 122
Query: 46 SMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG 105
Y ++DA KLF+EM KN+VSW TM+ Y N R + A+ L+ M E V N
Sbjct: 123 GGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNT 182
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
M ++L C G ++ R + +R+ E D + ++ K G + R LFD+
Sbjct: 183 VM--SMLAQC---GRIEEARRLFDRMP----ERDVISWTAMIAGLSKNGRIDEARLLFDR 233
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
NV WN+M++G Y + +D+ L L
Sbjct: 234 MPE------RNVVSWNAMITG--------------------------YAQNLRLDEALDL 261
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F MPERD+ SW +I G + L ARKLF++ N
Sbjct: 262 FERMPERDLPSWNTMITGLIQNGD---------------LRRARKLFNEMPK------KN 300
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQ 342
V W +MI+G V ++EEA+ + S + S+ G + TF S L AC NL Q
Sbjct: 301 VISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGE--GQQ 358
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKH 400
VH +I + Y+ V S LI++Y++ G + +A ++F ++D+V+W+G+I H
Sbjct: 359 VHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHH 418
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G A F++M K GF+ +D+T
Sbjct: 419 GYGKEAINFFKEM-----------------------------------RKSGFKPDDVTY 443
Query: 461 TSLIDMYLKCGEIDDGLALF-KFMPERDVV----SWTGIIVGCGQNGRAKEAIAYFQEMI 515
L+ G +++GL F + + +R ++ + ++ CG+ GR KEA + + +
Sbjct: 444 VGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERL- 502
Query: 516 QSRLKPNEITFLGVLSACR-HAGLV--EEAWTIFTSMKPE 552
KP+ + +L+ C HA + ++A ++PE
Sbjct: 503 --ETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPE 540
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 211/732 (28%), Positives = 336/732 (45%), Gaps = 98/732 (13%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R++ Q LH II L D L+ Y+ L + +F + W ++
Sbjct: 15 RTLAQ---LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLL 71
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
++ N AI LY+ ML ++ N + + +VL+ACS GDL +G+ +H RI +
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQ-QIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYS------------NWAASAYGNVAL--WNS 180
+ D V+ LL +Y + G L RK+F + + + N L +
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRC 190
Query: 181 MLSGG------------------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
M+S G K H + +KRG E + +SLI MY KCG
Sbjct: 191 MVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGS 250
Query: 217 IDDGLALFNFMPERDVVSWTGII------------VGCFEC------------------S 246
+ +F + R +WT +I + F S
Sbjct: 251 LRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRS 310
Query: 247 CFTLSALVDMYS----------NCNVLCEARKLFDQYSSWAAS----------AYGNVAL 286
C LS L + S + N+ C L + Y++ A +A+
Sbjct: 311 CTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAV 370
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN++IS Y +E + L + G DS++ S+L A N + LQ+HG
Sbjct: 371 WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN--EGELQLGLQIHGH 428
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
++ + +Y+ S LI++Y++ G V A +F ++ K VV W+ +I G +++G ++ A
Sbjct: 429 VIKRPFMDEYVFNS-LINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKA 487
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF M + ++ + SV++ CS L L +GK +H + G K T+L+DM
Sbjct: 488 ISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDM 547
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG++ +F M ER VVSW+ +I G +G+ E I F +M++S +KPN++T
Sbjct: 548 YAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTV 607
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VLSAC HAG V+E F SM+ ++G+EP EH+ C+VDLL +AG D+A ++I MP
Sbjct: 608 MNVLSACSHAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMP 666
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F P +IW ++L C H + I +L +D Y +LSN+YA G W+ +
Sbjct: 667 FPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGE 726
Query: 647 VRKAGKKLGEKK 658
VR K G KK
Sbjct: 727 VRSMMKGTGLKK 738
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 204/518 (39%), Gaps = 124/518 (23%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+VEA CG+ ++ KS H I+K G+ D F ++L+ MYA SL A +F+ +
Sbjct: 206 VVEA---CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVT 262
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ +WT M+++Y A+ L+ M + VEPN +L++C+ L G+
Sbjct: 263 YRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEVEPNSVTMRIILRSCTNLSLLREGK 321
Query: 126 LIHERITREKLEYD-TVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
+H + + L+ + L TLL++Y L K+ + +A+WN+++
Sbjct: 322 SVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRG------IAVWNTLI 375
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
S G Q+H +KR F
Sbjct: 376 SVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM 435
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------- 244
E V SLI+MY KCG +D +F+ M + VV+W +I G +
Sbjct: 436 DEYV-FNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 245 ---CSCFTLSALVDMYSNCN---------------VLCEARK-------LFDQYS----- 274
C A V + C+ + C RK L D Y+
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDL 554
Query: 275 SWAASAYGN-----VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
A + N V W+S+IS Y ++ Q E I L S + SG+ + T + L AC
Sbjct: 555 QTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSAC 614
Query: 330 IN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ +L FNS + + ++ V ++DL +R G++ A E+ +
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEP-------KREHFV--CIVDLLSRAGDLDEAYEIIKLM 665
Query: 383 P-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
P W L+ GC H +A + R++ N D
Sbjct: 666 PFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTD 703
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+LR Q+HA + + + T LI+ Y + G++ ++F+ D W ++
Sbjct: 12 TTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLL 71
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS-MKPEYG 554
NG +EAI+ + +M+ +++ N TF VL AC G + + +K +
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
++P + ++ + G+ G D A ++ EMP +
Sbjct: 132 MDPVVN--TALLSVYGELGYLDSARKVFGEMPLR 163
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 199/721 (27%), Positives = 338/721 (46%), Gaps = 84/721 (11%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + + GKS+H ++K G S D F L+SMYA +L A LFD A KN+V W
Sbjct: 456 CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 515
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M++AY N++ + A +++ ML+ +++PN + +++ C S + G+ +H +
Sbjct: 516 NSMISAYAQNQKSSEAFKMFQQMLK-ANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVM 574
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLF--------DQYSNWAASAYGNVALWNSMLSG 184
+ +L+ + LL MY K G F Y + S YG +++
Sbjct: 575 KYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWV 634
Query: 185 GKQVHAFCVKRGFEKEDVTLTS--LIDMYLKCGEIDDGLALFNFMPER------------ 230
+H +K G E + S L+ Y CG++ LF MP R
Sbjct: 635 RLLMH-LAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGC 693
Query: 231 -----------------------DVVSWTGIIVGC--------------------FECSC 247
D+V+ II C F C
Sbjct: 694 VHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDV 753
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
++AL+ MY NC + + LF+ + ++ WN++I+GY + E +
Sbjct: 754 SLVNALISMYFNCGDINAGKFLFE------VMPWRSIVSWNALITGYRFHYLQNEVMASF 807
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G + T + L +C LL S +H V +G ++ + ++LI +YA
Sbjct: 808 CQMIXEGQKPNYVTLLNLLPSCXTLLQGKS-----IHAFAVRTGVIVETPIITSLISMYA 862
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGL--IMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
R N+ S + LF K+D+ W+ + + TK+ S+ + F +++++ + +
Sbjct: 863 RFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTF--FCELLHARVEPDYITF 920
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S++ C L+SL V A+ +++GF+K + +LID++ +CG I +F+ +
Sbjct: 921 LSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSS 980
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+D VSW+ +I G G +G ++ A+A +M S +KP+ IT+ VLSAC H G +++ W I
Sbjct: 981 KDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMI 1040
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM E G+ +EHY CMVDLLG+ G ++A + ++P KP ++ S+L AC H
Sbjct: 1041 FNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHG 1099
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
N KL I L P++ YVML N+YA G W ++VR ++ +K G S +
Sbjct: 1100 NVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1159
Query: 665 E 665
E
Sbjct: 1160 E 1160
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/678 (23%), Positives = 298/678 (43%), Gaps = 90/678 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C ++ + +HC +++ +++ L+ YA + A + D++++ ++
Sbjct: 352 IKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDL 411
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W +++ Y+ N + +LE G ++PN +++++ C+ LD+G+ IH
Sbjct: 412 VTWNALISGYSLNGFDKEVFEVLRQILEMG-LKPNVSTFASIIPLCTRMKCLDIGKSIHG 470
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + D L L+ MY G+L R LFD ++A NV +WNSM+S
Sbjct: 471 FVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFD------SAAEKNVVIWNSMISAYAQ 524
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GK +HA +K + +
Sbjct: 525 NQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSV 584
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPER-----DVVSWTGIIV------------------ 240
T+L+ MY K G+ + +F MP + ++S GI+
Sbjct: 585 ATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWVRLLMHLAIKT 644
Query: 241 -GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
F+ +AL+ YS+C L + KLF + N WN++ISG V N
Sbjct: 645 GKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKM------PLRNAISWNTLISGCVHNGD 698
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
++A+ LL + M +D T S + C N + +HG + +G+ D +
Sbjct: 699 TKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQ--GMTLHGYAIKTGFACDVSLV 756
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ LI +Y G++ + LF +P + +V+W+ LI G H L + F MI Q
Sbjct: 757 NALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQK 816
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N + ++L C +L +GK +HAF V+ G E +TSLI MY + I+ + L
Sbjct: 817 PNYVTLLNLLPSC---XTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL 873
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ + D+ W I+ Q AKE++ +F E++ +R++P+ ITFL ++SAC +
Sbjct: 874 FEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSL 933
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ ++ + + G + H+ ++DL + G A+++ + K D W++M+
Sbjct: 934 NLSNSVMAYV-IQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSK-DAVSWSTMIN 991
Query: 600 ACETHNNTKLVSIIAEQL 617
H +++ + Q+
Sbjct: 992 GYGLHGDSEAALALLSQM 1009
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 200/444 (45%), Gaps = 71/444 (15%)
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLF 161
+ F + V+KACS G + + +H + R E + V+ L+D Y K G + R +
Sbjct: 344 DDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVL 403
Query: 162 DQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GFEKEDVTLTSLIDMYL 212
D+ S ++ WN+++SG G F V R G + T S+I +
Sbjct: 404 DKISQ------PDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCT 457
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+ +D G ++ F ++ F F AL+ MY+ L AR LFD
Sbjct: 458 RMKCLDIGKSIHGF-----------VVKSGFSSDEFLTPALISMYAGGGNLFIARDLFD- 505
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
++A NV +WNSMIS Y N+++ EA + + + M + TF S + C N
Sbjct: 506 -----SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENS 560
Query: 333 LNFNSRFALQVHGLIVTSGYELD--YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
NF +L H + Y LD V + L+ +YA+LG+ SA +F+++P+K
Sbjct: 561 ANFWXGKSLHAHVM----KYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRD 616
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
S +I G +G+ S+ F +++ LA ++ GK+
Sbjct: 617 S-MISG---YGIMSMGRPFFW-----------------VRLLMHLA-IKTGKE------- 647
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
F+ +L+ Y CG++ LF+ MP R+ +SW +I GC NG K+A+A
Sbjct: 648 --FDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 705
Query: 511 FQEMIQSRLKPNEITFLGVLSACR 534
+M Q +++ + +T + ++ CR
Sbjct: 706 LHKMQQEKMELDLVTLISIIPICR 729
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 179/385 (46%), Gaps = 20/385 (5%)
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+TS + ++ C I++ L + + RD++ +V F SCF L A
Sbjct: 247 VTSFLRLFDLCRNIENLKPLGSVLIVRDLMR-DEYVVAEFIISCFHLGA----------- 294
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+L S++ A +V L N MI + E+ + + G D +TF
Sbjct: 295 ---PEL--ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFP 349
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+KAC L A VH +++ + +E + ++ + L+D YA+ G + A + ++
Sbjct: 350 FVIKACSALGAV--WIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKIS 407
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ D+V W+ LI G + +G + + + R ++ N +S++ +C+ + L GK
Sbjct: 408 QPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKS 467
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H F VK GF ++ +LI MY G + LF E++VV W +I QN +
Sbjct: 468 IHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQK 527
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
+ EA FQ+M+++ ++PN +TF+ ++ C ++ ++ + +Y L+ L
Sbjct: 528 SSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVM-KYRLDSQLSVAT 586
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFK 588
++ + + G + A + +MP K
Sbjct: 587 ALLSMYAKLGDXNSAXFIFYQMPRK 611
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 172/453 (37%), Gaps = 121/453 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL ++ + C ++ QG +LH IK G + D+ N L+SMY + +N L
Sbjct: 716 LDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFL 775
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M ++IVSW ++T Y + N + + M+ G +PN +L +C
Sbjct: 776 FEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQ-KPNYVTLLNLLPSCX---T 831
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L G+ IH R + +T ++ +L+ MY + ++ +F + ++ALWN+
Sbjct: 832 LLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIF----LFEMGGKEDIALWNA 887
Query: 181 MLSGGKQ--------------------------------------------VHAFCVKRG 196
++S Q V A+ +++G
Sbjct: 888 IMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKG 947
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F+K V +LID++ +CG I +F + +D VSW+ +I G
Sbjct: 948 FDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING--------------- 992
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
Y L+ +E A+ LLS + SGM
Sbjct: 993 -------------------------------------YGLHGDSEAALALLSQMRLSGMK 1015
Query: 317 IDSYTFTSALKACIN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
D T+ S L AC + + FNS +V G + ++DL R
Sbjct: 1016 PDGITYASVLSACSHGGFIDQGWMIFNS---------MVEEGVPRRMEHYACMVDLLGRT 1066
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
G + A + +LP K V L+ C HG
Sbjct: 1067 GQLNEAYDFVEKLPCKPSVSLLESLLXACIIHG 1099
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 203/709 (28%), Positives = 337/709 (47%), Gaps = 85/709 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN--IVSWTT 74
++I Q K +H +++ +G+ T ++L+S Y L+ A L + + W +
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLT-SHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ +Y +N R N + + ++ S P+ + + V KAC + G H
Sbjct: 98 LIRSYGNNGRANKCLSSFC-LMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVT 156
Query: 135 KLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML---------- 182
+ + N L+ MY +CGSL+ RK+FD+ W +V WNS++
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVW------DVVSWNSIIESYAKLGKPK 210
Query: 183 -----------------------------------SGGKQVHAFCVKRGFEKEDVTLTSL 207
S GKQ H F V + L
Sbjct: 211 MALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCL 270
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+DMY K G +D+ +F+ MP +DVVSW ++ G YS +A
Sbjct: 271 VDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAG---------------YSQIGRFEDAV 315
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+LF+Q +V W++ ISGY EA+ + + SSG+ + T S L
Sbjct: 316 RLFEQMQEEKIKM--DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 328 AC--INLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
C + L +A++ + +G+ + +V + LID+YA+ V A +F L
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSL 433
Query: 383 -PK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASL 438
PK +DVV W+ +I G ++HG + A L +M + N F IS L C+ LA+L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 439 RRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
GKQ+HA+ ++ + +++ LIDMY KCG+I D +F M E++ V+WT ++ G
Sbjct: 494 SIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTG 553
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G +G +EA+ F+EM + K + +T L VL AC H+G++++ F MK ++G+ P
Sbjct: 554 YGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSP 613
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY C+VDLLG+AG + A +LI EMP +P +W ++L C H +L A+++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKI 673
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ + Y +LSN+YA G W ++++R + G +K+ G SW+E
Sbjct: 674 TELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVE 722
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 237/545 (43%), Gaps = 63/545 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ CG+ S++ G S H G ++F GN L++MY+ SL+DA K+FDEM ++
Sbjct: 134 FKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDV 193
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ +Y +P A+ +++ M P+ VL C+ G LG+ H
Sbjct: 194 VSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHG 253
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
++ + + N L+DMY K G + + +SN +V WN+M++G Q+
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKFG-MMDEANTVFSNMPVK---DVVSWNAMVAGYSQIG 309
Query: 190 AF-CVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWT 236
F R FE+ + VT ++ I Y + G + L + M + V+
Sbjct: 310 RFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 237 GIIVGCF---------ECSCF------------------TLSALVDMYSNCNVLCEARKL 269
++ GC E C+ ++ L+DMY+ C + AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFTSALK 327
FD S +V W MI GY + +A+ LLS + +++T + AL
Sbjct: 430 FDSLSPKER----DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKD 386
AC +L + Q+H + + + SN LID+YA+ G++ A +F + +K+
Sbjct: 486 ACASLAALS--IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKN 543
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V W+ L+ G HG A +F +M ++ + VL CS + +G +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 447 -----FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
F V G E L+D+ + G ++ L L + MP E V W ++ C
Sbjct: 604 RMKTDFGVSPGPEH----YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRI 659
Query: 501 NGRAK 505
+G+ +
Sbjct: 660 HGKVE 664
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 176/495 (35%), Gaps = 164/495 (33%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C + GK H + + Q++F GN L+ MYA F +++A+ +F M
Sbjct: 232 LVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP 291
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE---------------------------- 97
K++VSW MV Y+ R A+RL+ M E
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 98 ------YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-------DTVLMN 144
++PN +VL C+ G L G+ IH + ++ + +++N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVIN 411
Query: 145 TLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG------------------ 184
L+DMY KC + R +FD S +V W M+ G
Sbjct: 412 QLIDMYAKCKKVDIARAMFDSLS----PKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTL---TSLIDMYLK 213
GKQ+HA+ ++ ++ V L LIDMY K
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAK 525
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
CG+I D +F+ M E++ V+WT ++ G
Sbjct: 526 CGDIGDARLVFDNMMEKNEVTWTSLMTG-------------------------------- 553
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
YG + GY EEA+ + + G +D T L AC
Sbjct: 554 -------YG--------MHGY-----GEEALGIFEEMRRIGFKLDGVTLLVVLYAC---- 589
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKD 386
S + G+ + + D+ V L+DL R G + +AL L +P +
Sbjct: 590 ---SHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPP 646
Query: 387 VVAWSGLIMGCTKHG 401
V W L+ C HG
Sbjct: 647 PVVWVALLSCCRIHG 661
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 318/655 (48%), Gaps = 36/655 (5%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G LH ++ G D+FTGN L++ YA DA ++FDEM +++VSW ++V+A+
Sbjct: 137 KGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFL 196
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
N + A R M+ G N +V+ AC + G IH + L
Sbjct: 197 VNGMFHDARRALVSMMRSG-FPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMV 255
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGNVALWNSMLSGGKQVHAF 191
L N L+DMY K G + + ++FD N A + N + +L +++
Sbjct: 256 NLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEH 315
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
V G +TL+SL+ ++ G D G R+V ++ I + F +
Sbjct: 316 NVMPG----SITLSSLLPALVELGSFDLG---------REVHGYS--IKRAMDLDIFVAN 360
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+LVDMY+ L +A +F+Q NV WN+MI+ V N EA L++ +
Sbjct: 361 SLVDMYAKFGSLEKASTIFEQMKD------RNVVSWNAMIANLVQNGAETEAFRLVTDMQ 414
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
SG C +S T + L AC + + + Q+H + G D + + LID+Y++ G
Sbjct: 415 KSGECPNSITLVNVLPACARMASL--KMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQ 472
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ A +F R +KD V+++ LI+G ++ + LLF+ M + D + L
Sbjct: 473 LSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSA 531
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ L+ + GK++H V+R SL+D+Y K G + +F + ++DV SW
Sbjct: 532 CTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASW 591
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I+G G +G+ A F+ M L + ++++ VL+AC H GLV++ F+ M
Sbjct: 592 NTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA 651
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+ +EP HY CMVDLLG+AG ++I +MPF + +W ++L AC H N +L
Sbjct: 652 Q-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQ 710
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
AE L PE Y ++ N+YA G W+ +K+RK K + +K SW++
Sbjct: 711 WAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 765
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/596 (25%), Positives = 272/596 (45%), Gaps = 82/596 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+++ +V + CG + K G S+H +K GL+ + N L+ MY F + + ++
Sbjct: 218 LNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQV 277
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +N VSW + + + + +R++ M E+ +V P S++L A G
Sbjct: 278 FDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEH-NVMPGSITLSSLLPALVELGS 336
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALW 178
DLGR +H + ++ D + N+L+DMY K GSL + +F+Q + NV W
Sbjct: 337 FDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKD------RNVVSW 390
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--------- 229
N+M+ A V+ G E E L + DM K GE + + L N +P
Sbjct: 391 NAMI-------ANLVQNGAETEAFRLVT--DMQ-KSGECPNSITLVNVLPACARMASLKM 440
Query: 230 -RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ + +W+ I F +AL+DMYS C L AR +F++ S +V+ +N
Sbjct: 441 GKQIHAWS--IRRGLMFDLFISNALIDMYSKCGQLSLARNIFER------SEKDDVS-YN 491
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
++I GY + E++ L + S G+ D+ +F AL AC NL F + ++H ++V
Sbjct: 492 TLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF--KHGKEIHCVLV 549
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ ++L+DLY + G + +A ++F+++ KKDV +W+ +I+G HG +A+
Sbjct: 550 RRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFE 609
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M D + +VL CS + +GK+ + V + E + + ++D+
Sbjct: 610 LFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLG 669
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
+ G++ + + MP N +
Sbjct: 670 RAGQLSKCAEIIRDMP----------------------------------FPANSDVWGA 695
Query: 529 VLSACRHAGLVEEA-WTI--FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+L ACR G +E A W +KPE H +Y M+++ + G +++A ++
Sbjct: 696 LLGACRIHGNIELAQWAAEHLFELKPE-----HSGYYTLMINMYAETGRWNEANKI 746
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C K GK +HC +++ LS F N+LL +Y L A K+F+++ +K+
Sbjct: 528 ALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKD 587
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHM----LEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ SW TM+ Y + + + A L+ M L+Y V Y AVL ACS G +D G
Sbjct: 588 VASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVS-----YIAVLAACSHGGLVDKG 642
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS- 183
+ ++ + +E + ++D+ + G L+ K + + A +V W ++L
Sbjct: 643 KKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLS-KCAEIIRDMPFPANSDV--WGALLGA 699
Query: 184 ----GGKQVHAFCVKRGFE---KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G ++ + + FE + T +I+MY + G ++ + M R V
Sbjct: 700 CRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKV 755
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 257/470 (54%), Gaps = 20/470 (4%)
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-WTGIIVGCFECSCFTLSALVDMYS 258
+ V+LT L+ + ++ G DG + + +S ++G G F ++LV MY+
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGG----GIFVSNSLVSMYA 126
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCI 317
+L +A +LFD+ NV W ++++ + + EEA+ L + G+
Sbjct: 127 KFGLLDDALRLFDRMPER------NVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAP 180
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
++YTF+S L AC +H V G + D V S+LID Y +LG++
Sbjct: 181 NAYTFSSVLGAC-----GTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRR 235
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F + +D+V W+ +I G + G A LF M ++ NQ ++SVL+ C+ +
Sbjct: 236 VFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVM 295
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L G+QVHA +K +E++ I +L+DMY KCG ++D ALF MP+RDV+SW+ +I G
Sbjct: 296 LEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISG 353
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
QNG++ EA+ F M + PN IT +GVL AC HAGLVE+ W F SMK +G++P
Sbjct: 354 LAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQP 413
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EH+ CMVDLLG+AG D+A + I +M +PD IW ++L AC H + L + A ++
Sbjct: 414 EREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREI 473
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
L P+D V+LSN YA L W K KA + G KK G SWIE+
Sbjct: 474 LKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIEL 523
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 198/474 (41%), Gaps = 122/474 (25%)
Query: 1 MDLRRIVE-ALRH--CGQRRSIKQGKSLHCRIIKY--GLSQDIFTGNNLLSMYADFTSLN 55
+ L R+V+ +RH G R I + H ++ Y G IF N+L+SMYA F L+
Sbjct: 73 VSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLD 132
Query: 56 DAHKLFDEMARKNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
DA +LFD M +N+V+WTT+V A ++ R A+R M G V PN + +S+VL A
Sbjct: 133 DALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDG-VAPNAYTFSSVLGA 191
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAY 172
C G L +H + L+ D + ++L+D Y+K G L R++FD+
Sbjct: 192 CGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTR----- 243
Query: 173 GNVALWNSMLSG--------------------------------------------GKQV 188
++ +WNS+++G G+QV
Sbjct: 244 -DLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQV 302
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
HA +K +E++ + +L+DMY KCG ++D ALF+ MP+RDV+SW+ +I G +
Sbjct: 303 HAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQ---- 356
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
N ++ EA+ +
Sbjct: 357 ------------------------------------------------NGKSAEALRVFD 368
Query: 309 HIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ S G+ + T L AC L+ + + L G + + + ++DL
Sbjct: 369 LMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF---GIQPEREHHNCMVDLL 425
Query: 367 ARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
R G + A+E + + D V W L+ C H +LA R+++ D
Sbjct: 426 GRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPD 479
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 289/581 (49%), Gaps = 43/581 (7%)
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-- 157
SV P Y + +AC L GRL HE++ R L N++L MY KCGSL
Sbjct: 7 SVSPRS--YKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
RK+FD+ N+ WN+++S A+ F+K ++++++ K
Sbjct: 65 RKVFDEMRE------RNLVSWNTIIS------AYAENGVFDKGFCMFSNMLELETK---- 108
Query: 218 DDGLALFNFMPERDVVSWTGIIVG----------CFECSCFTLSALVDMYSNCNVLCEAR 267
+G F+ R +++ +G+ +G + +A+ +MY C L A
Sbjct: 109 PNGSTYIGFL--RSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAE 166
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+F++ S N W ++ GY E+ +A+ L + + + G+ +D Y F+ LK
Sbjct: 167 LVFEKMSE------KNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLK 220
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC L N F Q+HG IV G E + VG+ L+D Y + N++SA + F + + +
Sbjct: 221 ACAGLEELN--FGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND 278
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+WS LI G + G A F + + D+N F +S+ + CS LA G Q HA
Sbjct: 279 VSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHAD 338
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+K +++I MY +CG +D +F+ + + D V+WT II G G A EA
Sbjct: 339 AIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEA 398
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F+ M ++PN +TF+ VL+AC H+GLV E SM YG+ ++HY CMVD
Sbjct: 399 LKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVD 458
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
+ +AG +A +LI MPF PD W +L C T+ N ++ + AE L PED +
Sbjct: 459 IYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAG 518
Query: 628 YVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
Y+++ N+YA+ G W + VRK A + L K+ SWI V
Sbjct: 519 YILMFNLYASFGKWKEAANVRKMMAERNL-RKELSCSWITV 558
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 218/528 (41%), Gaps = 97/528 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG+ +S+ G+ H ++ + + F N++L MY SL DA K+FDEM +N+VSW
Sbjct: 20 CGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSW 79
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++AY N + ++++MLE +PNG Y L++ L++G+ IH
Sbjct: 80 NTIISAYAENGVFDKGFCMFSNMLEL-ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAI 138
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV--------------A 176
R L + + + +MYVKCG L +F++ S A A+ + A
Sbjct: 139 RSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALA 198
Query: 177 LWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
L+ M L+ G+Q+H VK G E E T L+D Y+
Sbjct: 199 LFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYV 258
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KC ++ F ++ E + VSW+ +I G Y EA K F+
Sbjct: 259 KCSNLESATKAFEWISEPNDVSWSALITG---------------YCQMGEFEEALKTFES 303
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ + + I+S+T+TS +AC L
Sbjct: 304 -------------------------------------LRTRSVDINSFTYTSIFQACSAL 326
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+FNS Q H + S S +I +Y+R G + A +F + D VAW+
Sbjct: 327 ADFNS--GAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTA 384
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKR 451
+I G G A LFR M + N +VL CS + G+Q + +
Sbjct: 385 IIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNY 444
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G ++D+Y + G + + L L + MP D +SW ++ GC
Sbjct: 445 GVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGC 492
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 28/271 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+ +H I+K GL ++ G L+ Y ++L A K F+ ++ N
Sbjct: 219 LKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND 278
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+ ++T Y A++ + L SV+ N F Y+++ +ACS D + G H
Sbjct: 279 VSWSALITGYCQMGEFEEALKTFES-LRTRSVDINSFTYTSIFQACSALADFNSGAQAHA 337
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ L + ++ MY +CG L ++F+ + A A W ++++G
Sbjct: 338 DAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVA------WTAIIAGYAY 391
Query: 185 -GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G A + R G VT +++ G + +G M V+ T
Sbjct: 392 QGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATT-- 449
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
+ ++C +VD+YS L EA +L
Sbjct: 450 -IDHYDC-------MVDIYSRAGFLQEALEL 472
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 197/758 (25%), Positives = 343/758 (45%), Gaps = 112/758 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY----------------- 48
+ +ALR CG R ++ ++LH R++ GL+ +F N LL Y
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66
Query: 49 ---------------ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
A SL+DA +LFD M R+++ SW T+++ Y +R + +
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M G PN F + V+K+C G +L + + D + L+DM+V+C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 154 G--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-----CVKRGFEKEDVTLTS 206
G +LF Q + NSML+G +++ + E++ V+
Sbjct: 187 GYVDFASRLFSQIER------PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 207 LIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCF------------------- 243
+I + G + + L L M + D ++T + C
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 244 -ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ + SAL+++Y+ C EA+++F+ N W +I G + E +
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQD------RNSVSWTVLIGGSLQYECFSK 354
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
++ L + + + M ID + + + C N ++ Q+H L + SG+ +V ++L
Sbjct: 355 SVELFNQMRAELMAIDQFALATLISGCFNRMDLC--LGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK----------------------- 399
I LYA+ G++++A +F + ++D+V+W+ +I ++
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWN 472
Query: 400 --------HGLNSLAYLLFRDMINSNQDVNQFIIS--SVLKVCSCLASLRRGKQVHAFCV 449
HG ++ M+ S +DV ++ ++ + C+ + + + G Q+ V
Sbjct: 473 AMLGAYIQHGAEEDGLKMYSAML-SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTV 531
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G + I MY KCG I + LF + +DVVSW +I G Q+G K+A
Sbjct: 532 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAK 591
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F +M+ KP+ I+++ VLS C H+GLV+E F M +G+ P LEH+ CMVDLL
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A+ LI +MP KP +W ++L AC+ H N +L + A+ + D Y+
Sbjct: 652 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYM 711
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+L+ +Y+ G D ++VRK + G KK G SW+EV
Sbjct: 712 LLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 200/447 (44%), Gaps = 59/447 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +L C + S+ GK LH ++I+ D + + L+ +YA S +A ++
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSG 119
F+ + +N VSWT ++ + + ++ L+N M E +++ F + ++ C
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ--FALATLISGCFNRM 385
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
DL LGR +H + V+ N+L+ +Y KCG L F +++ + ++ W
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF----VFSSMSERDIVSWT 441
Query: 180 SMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PERDV- 232
SM++ Q+ R F + +T +++ Y++ G +DGL +++ M ++DV
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501
Query: 233 ---VSWTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
V++ + GC + L +A + MYS C + EA+KL
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD + +V WN+MI+GY + ++A + S G D ++ + L C
Sbjct: 562 FDLLNG------KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 615
Query: 330 IN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L F+ +VHG ++ G E S ++DL R G++ A +L ++
Sbjct: 616 SHSGLVQEGKLYFD--MMTRVHG--ISPGLEH----FSCMVDLLGRAGHLTEAKDLIDKM 667
Query: 383 PKKDVV-AWSGLIMGCTKHGLNSLAYL 408
P K W L+ C HG + LA L
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAEL 694
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 200/692 (28%), Positives = 330/692 (47%), Gaps = 86/692 (12%)
Query: 41 GNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
G +++ Y + DA + + + V W +V + + AI + ML G+
Sbjct: 86 GTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGT 145
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL---- 156
+P+ F LKAC GR +H I E + + N L+ MY +CGSL
Sbjct: 146 -KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 157 ------TRKLFDQYSNW----AASAYGN-----VALWNSM-------------------- 181
TRK D +W AA G+ + L++ M
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 182 ----------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
L K++H++ ++ G + +LID Y KCG ++D + +FN M +D
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
VVSW ++ G Y+ A +LF+ +V W+++I
Sbjct: 325 VVSWNAMVTG---------------YTQSGNFGAAFELFENMRKENIPL--DVITWSAVI 367
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL----- 346
+GY ++EA+ + G +S T S L AC +L + + + L
Sbjct: 368 AGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLL 427
Query: 347 -----IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD--VVAWSGLIMGCTK 399
G D +V + LID+Y++ + K+A +F +P+++ VV W+ +I G +
Sbjct: 428 SLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQ 487
Query: 400 HGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+G ++ A +F +MI+ V N + IS +L C+ LA+LR GKQ+HA+ V R E E
Sbjct: 488 YGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY-VTRHHEYEP 546
Query: 458 ---ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
LIDMY KCG++D +F MP+R+ VSWT ++ G G +GR KEA+ F +M
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM 606
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
++ P++I+FL +L AC H+G+V++ F M+ +Y + EHY C++DLL + G
Sbjct: 607 QKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGR 666
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
D A + I EMP +P IW ++L AC H+N +L +L+ E+ Y ++SN+
Sbjct: 667 LDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNI 726
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
YA W ++++R+ KK G +K+ G SW++
Sbjct: 727 YANARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 160/610 (26%), Positives = 259/610 (42%), Gaps = 115/610 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK- 67
AL+ CG+ S G++LH I G ++F N L++MY+ SL DA +FDE+ RK
Sbjct: 155 ALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKG 214
Query: 68 --NIVSWTTMVTAYTSNKRPNWAIRLYNHML----EYGSVEPNGFMYSA-VLKACSLSGD 120
+++SW ++V A+ P A+ L++ M E + E + + +L AC+
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKA 274
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
L + IH R D + N L+D Y KCGS+ D + + +V WN+
Sbjct: 275 LPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMN----DAVKVFNVMEFKDVVSWNA 330
Query: 181 MLSGGKQV----HAFCVKRGFEKEDVTL-----TSLIDMYLKCGEIDDGLALFNFM---- 227
M++G Q AF + KE++ L +++I Y + G + L F M
Sbjct: 331 MVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDG 390
Query: 228 PERDVVSWTGIIVGC---------FECSCFTL-----------------------SALVD 255
E + V+ ++ C E ++L +AL+D
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALID 450
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MYS C AR +FD NV W MI GY + +A+ + S + S
Sbjct: 451 MYSKCRSFKAARSIFDSIPRRER----NVVTWTVMIGGYAQYGDSNDALKIFSEMISKPY 506
Query: 316 CI--DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD---YIVGSNLIDLYARLG 370
+ ++YT + L AC +L R Q+H VT +E + Y V + LID+Y++ G
Sbjct: 507 AVAPNAYTISCILMACAHLAAL--RMGKQIHAY-VTRHHEYEPSVYFVANCLIDMYSKCG 563
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+V +A +F +PK++ V+W+ ++ G HG A +F M
Sbjct: 564 DVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM----------------- 606
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM-PERDVV 489
K GF +DI+ L+ G +D GL F M + DVV
Sbjct: 607 ------------------QKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVV 648
Query: 490 S----WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR---HAGLVEEA 542
+ + +I + GR +A QEM ++P+ + ++ +LSACR + L E A
Sbjct: 649 ASAEHYACVIDLLARCGRLDKAWKTIQEM---PMEPSAVIWVALLSACRVHSNVELAEYA 705
Query: 543 WTIFTSMKPE 552
+MK E
Sbjct: 706 LNKLVNMKAE 715
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 195/549 (35%), Gaps = 176/549 (32%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ IV L C +++ Q K +H I+ G D F N L+ YA S+NDA K+F
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM---------LEYGSV----------- 101
+ M K++VSW MVT YT + A L+ +M + + +V
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377
Query: 102 --------------EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL----------- 136
EPN ++L AC+ G L G IH ++ L
Sbjct: 378 EALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDG 437
Query: 137 -EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------- 184
D ++ N L+DMY KC S R +FD NV W M+ G
Sbjct: 438 DGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRER----NVVTWTVMIGGYAQYGDSND 493
Query: 185 -------------------------------------GKQVHAFCVKRGFEKED---VTL 204
GKQ+HA+ V R E E
Sbjct: 494 ALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY-VTRHHEYEPSVYFVA 552
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
LIDMY KCG++D +F+ MP+R+ VSWT ++ G
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG----------------------- 589
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
Y ++ + +EA+ + + +G D +F
Sbjct: 590 -----------------------------YGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALEL 378
L AC S + GL DY V ++ +IDL AR G + A +
Sbjct: 621 LLYAC-------SHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKT 673
Query: 379 FHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN--SNQDVNQFIISSVLKVCSCL 435
+P + V W L+ C H LA ++N + D + +IS++
Sbjct: 674 IQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNI------Y 727
Query: 436 ASLRRGKQV 444
A+ RR K V
Sbjct: 728 ANARRWKDV 736
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ ++ Y G K AL + R+ V W+ L+ K G A + M+ +
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ F + LK C L S G+ +H GFE +L+ MY +CG ++D
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 478 ALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAYFQE--MIQSRLKPNE----ITFLG 528
+F + + DV+SW I+ + + A+ F E MI NE I+ +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLE--PHLEHYYC--MVDLLGQAGCFDDAEQLIAE 584
+L AC + + I + Y + + + C ++D + G +DA ++
Sbjct: 265 ILPACASLKALPQIKEIHS-----YAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 585 MPFKPDKTIWASML 598
M FK D W +M+
Sbjct: 320 MEFK-DVVSWNAMV 332
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 258/487 (52%), Gaps = 40/487 (8%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLK--CGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G +HA ++ G + T +L+++Y K C +D TG+
Sbjct: 69 GASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDS----------------TGV---- 108
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
A+VD+ + RK+FD+ +V WN+++ G ++ E
Sbjct: 109 ---------AIVDVPGSSTAFESVRKVFDEMIE------RDVVSWNTLVLGCAEEGRHHE 153
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ + + G DS+T ++ L + + L+VHG +G++ D VGS+L
Sbjct: 154 ALGFVRKMCREGFRPDSFTLSTVLPIFAECADV--KRGLEVHGFAFRNGFDSDVFVGSSL 211
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA ++++F LP +D + W+ L+ GC ++G A +FR M+ +
Sbjct: 212 IDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP 271
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
SS++ VC LASLR GKQ+HA+ + GFE +SLIDMY KCGEI +F
Sbjct: 272 VTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDK 331
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M DVVSWT +I+G +G A+EA+ F+ M KPN ITFL VL+AC HAGLV++
Sbjct: 332 MSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKG 391
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
W F SM YG+ P LEH+ + D LG+AG D+A I++M KP ++W+++L+AC
Sbjct: 392 WKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACR 451
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H NT L +A++++ P +V+LSN+Y+ G W+ + +R++ +K G KK
Sbjct: 452 VHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPAC 511
Query: 662 SWIEVSS 668
SWIEV S
Sbjct: 512 SWIEVKS 518
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 180/421 (42%), Gaps = 57/421 (13%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC---------------- 153
A LK+C+ G LG +H R D N LL++Y K
Sbjct: 55 AALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVP 114
Query: 154 GSLT-----RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GFEK 199
GS T RK+FD+ +V WN+++ G G+ A R GF
Sbjct: 115 GSSTAFESVRKVFDEMIE------RDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRP 168
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ TL++++ ++ +C ++ GL + F F+ F S+L+DMY+N
Sbjct: 169 DSFTLSTVLPIFAECADVKRGLEVHGFA-----------FRNGFDSDVFVGSSLIDMYAN 217
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
C + K+FD + LWNS+++G N EEA+ + + +G+
Sbjct: 218 CTRTDYSVKVFDNLP------VRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP 271
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
TF+S + C NL + RF Q+H ++ G+E + + S+LID+Y + G + A +F
Sbjct: 272 VTFSSLIPVCGNLASL--RFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
++ DVV+W+ +IMG HG A +LF M N N +VL CS +
Sbjct: 330 DKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD 389
Query: 440 RG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVG 497
+G K + G +L D + GE+D+ M + S W+ ++
Sbjct: 390 KGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449
Query: 498 C 498
C
Sbjct: 450 C 450
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 118/298 (39%), Gaps = 72/298 (24%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF----------------- 51
AL+ C G SLH I+ G D FT N LL++Y
Sbjct: 56 ALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPG 115
Query: 52 --TSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
T+ K+FDEM +++VSW T+V R + A+ M G P+ F S
Sbjct: 116 SSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREG-FRPDSFTLS 174
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSNW 167
VL + D+ G +H R + D + ++L+DMY C + K+FD
Sbjct: 175 TVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLP-- 232
Query: 168 AASAYGNVALWNSMLSG------------------------------------------- 184
+ LWNS+L+G
Sbjct: 233 ----VRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLR 288
Query: 185 -GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQ+HA+ + GFE +SLIDMY KCGEI +F+ M DVVSWT +I+G
Sbjct: 289 FGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMG 346
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG S++ GK LH +I G ++F ++L+ MY ++ AH +FD+M+ ++VSW
Sbjct: 281 CGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSW 340
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
T M+ Y + A+ L+ M E G+ +PN + AVL ACS +G +D G
Sbjct: 341 TAMIMGYALHGPAREALVLFERM-ELGNAKPNHITFLAVLTACSHAGLVDKG 391
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK--CGEIDD-GLAL-- 479
+ + LK C+ L G +HA ++ G + T +L+++Y K C +D G+A+
Sbjct: 53 LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVD 112
Query: 480 --------------FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
F M ERDVVSW +++GC + GR EA+ + ++M + +P+ T
Sbjct: 113 VPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFT 172
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
VL V+ + G + + ++D+ D + ++ +
Sbjct: 173 LSTVLPIFAECADVKRGLEVH-GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231
Query: 586 PFKPDKTIWASMLKACETHNNTK 608
P + D +W S+L C + + +
Sbjct: 232 PVR-DHILWNSLLAGCAQNGSVE 253
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 346/692 (50%), Gaps = 79/692 (11%)
Query: 7 VEALRHCGQRRSIKQG--KSLHC--RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
V R C RR+++ G H R +GL GN +LSM F A ++F
Sbjct: 98 VALFRLCEWRRAVEPGLRACAHADDRHAWFGLR----LGNAMLSMLVRFGETWHAWRVFA 153
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+M +++ SW MV Y A+ LY+ M+ + V P+ + + VL++C D
Sbjct: 154 KMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMM-WAGVRPDVYTFPCVLRSCGGVPDWR 212
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNS 180
+GR +H + R + ++N L+ MY KCG + RK+FD + A + WN+
Sbjct: 213 MGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD------SMAVMDCISWNA 266
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWT 236
M++G + + GE + GL LF M + +V ++ T
Sbjct: 267 MIAG--------------------------HFENGECNAGLELFLTMLQDEVQPNLMTIT 300
Query: 237 GIIVGCFECSCFTLS--------------------ALVDMYSNCNVLCEARKLFDQYSSW 276
+ V S T + +L+ MY++ ++ +AR +F + +
Sbjct: 301 SVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR 360
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
A + W +MISGY N ++A+ + + + + + D T SAL AC L + +
Sbjct: 361 DAMS------WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLD 414
Query: 337 SRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
+++H L + G+ + Y+V +N L+++YA+ + A+E+F +P+KDVV+WS +I
Sbjct: 415 --VGVKLHELAESKGF-MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIA 471
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
G + N A FR M+ ++ N + L C+ +LR GK++HA ++ G
Sbjct: 472 GFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAY 530
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
E +LID+Y+KCG+ A F +DVVSW +I G +G + A+++F +M+
Sbjct: 531 EGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMV 590
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ P+E+TF+ +L AC G+V E W +F SM +Y + P+L+HY CMVDLL + G
Sbjct: 591 KIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQL 650
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+A I EMP PD +W ++L C H + +L + A+ +L P D +V+L ++Y
Sbjct: 651 TEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLY 710
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A G+WD L++VRK ++ G + +G SW+EV
Sbjct: 711 ADAGIWDKLARVRKTMREKGLDHDSGCSWVEV 742
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 197/758 (25%), Positives = 343/758 (45%), Gaps = 112/758 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY----------------- 48
+ +ALR CG R ++ ++LH R++ GL+ +F N LL Y
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66
Query: 49 ---------------ADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
A SL+DA +LFD M R+++ SW T+++ Y +R + +
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M G PN F + V+K+C G +L + + D + L+DM+V+C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 154 G--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF-----CVKRGFEKEDVTLTS 206
G +LF Q + NSML+G +++ + E++ V+
Sbjct: 187 GYVDFASRLFSQIER------PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 207 LIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCF------------------- 243
+I + G + + L L M + D ++T + C
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 244 -ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ + SAL+++Y+ C EA+++F+ N W +I G + E +
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQD------RNSVSWTVLIGGSLQYECFSK 354
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
++ L + + + M ID + + + C N ++ Q+H L + SG+ +V ++L
Sbjct: 355 SVELFNQMRAELMAIDQFALATLISGCFNRMDLC--LGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK----------------------- 399
I LYA+ G++++A +F + ++D+V+W+ +I ++
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWN 472
Query: 400 --------HGLNSLAYLLFRDMINSNQDVNQFIIS--SVLKVCSCLASLRRGKQVHAFCV 449
HG ++ M+ S +DV ++ ++ + C+ + + + G Q+ V
Sbjct: 473 AMLGAYIQHGAEEDGLKMYSAML-SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTV 531
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G + I MY KCG I + LF + +DVVSW +I G Q+G K+A
Sbjct: 532 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAK 591
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F +M+ KP+ I+++ VLS C H+GLV+E F M +G+ P LEH+ CMVDLL
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A+ LI +MP KP +W ++L AC+ H N +L + A+ + D Y+
Sbjct: 652 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYM 711
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+L+ +Y+ G D ++VRK + G KK G SW+EV
Sbjct: 712 LLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 200/447 (44%), Gaps = 59/447 (13%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +L C + S+ GK LH ++I+ D + + L+ +YA S +A ++
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSG 119
F+ + +N VSWT ++ + + ++ L+N M E +++ F + ++ C
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ--FALATLISGCFNRM 385
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
DL LGR +H + V+ N+L+ +Y KCG L F +++ + ++ W
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF----VFSSMSERDIVSWT 441
Query: 180 SMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PERDV- 232
SM++ Q+ R F + +T +++ Y++ G +DGL +++ M ++DV
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501
Query: 233 ---VSWTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKL 269
V++ + GC + L +A + MYS C + EA+KL
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD + +V WN+MI+GY + ++A + S G D ++ + L C
Sbjct: 562 FDLLNG------KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 615
Query: 330 IN-------LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L F+ +VHG ++ G E S ++DL R G++ A +L ++
Sbjct: 616 SHSGLVQEGKLYFD--MMTRVHG--ISPGLEH----FSCMVDLLGRAGHLTEAKDLIDKM 667
Query: 383 PKKDVV-AWSGLIMGCTKHGLNSLAYL 408
P K W L+ C HG + LA L
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAEL 694
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 308/637 (48%), Gaps = 89/637 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y + N A LFD+M +++ SW M+T Y N R A RL++ M E V
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
++++L + +G +D R + + + E +++ N LL YV G +
Sbjct: 144 S-----WNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACL 194
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LF+ S+W ++ WN ++ G +++ ++ D
Sbjct: 195 LFESKSDW------DLISWNCLMGG--------------------------FVRKKKLGD 222
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF+ MP RD +SW +I G Y+ L +AR+LFD+ S
Sbjct: 223 ARWLFDKMPVRDAISWNTMISG---------------YAQGGGLSQARRLFDE------S 261
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V W +M+SGYV N +EA T + N +++N+
Sbjct: 262 PTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK-----------------NEVSYNAMI 304
Query: 340 ALQVHGLIVTSGYEL-------DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
A V + EL + + +I Y ++G++ A + F +P++D V+W+
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G + G A +F ++ + +N+ L C+ +A+L GKQ+H VK G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ +L+ MY KCG ID+ F+ + E+DVVSW ++ G ++G ++A+ F+
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M + +KP+EIT +GVLSAC H GL++ F SM +YG+ P +HY CM+DLLG+A
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G ++A+ LI MPF+P W ++L A H NT+L AE + P++ YV+LS
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLS 604
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
N+YA G W K+R + +G +K G SW+EV +
Sbjct: 605 NLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQN 641
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 217/491 (44%), Gaps = 60/491 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+F+ N +L+ Y L DA +LFD M K++VSW ++++ Y N + A ++++M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 96 LEYGSVEPNGFMYSAVLKA---------------------CSLSGDLDLGRLIHERITRE 134
E S+ NG + + V C + G + +L R +
Sbjct: 169 PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 135 KLEY-DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
K+ D + NT++ Y + G L+ R+LFD+ S +V W +M+SG Q
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGML 282
Query: 192 CVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ F EK +V+ ++I Y++ ++D LF MP R++ SW +I G
Sbjct: 283 DEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG----- 337
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
Y + +ARK FD + W ++I+GY + EEA+ +
Sbjct: 338 ----------YGQIGDIAQARKFFDMMPQ------RDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
I G ++ TF AL C ++ Q+HG V GY VG+ L+ +Y
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAAL--ELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G++ A + F + +KDVV+W+ ++ G +HG A +F M + ++ +
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499
Query: 427 SVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
VL CS L RG + ++ G T +ID+ + G +++ L + MP
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559
Query: 485 ERDVVSWTGII 495
+ SW ++
Sbjct: 560 QPGAASWGALL 570
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 178/418 (42%), Gaps = 66/418 (15%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
C + + D+ + N L+ + L DA LFD+M ++ +SW TM++ Y +
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A RL++ S + F ++A++ +G LD + + E E + V N +
Sbjct: 253 QARRLFDE-----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFD----EMPEKNEVSYNAM 303
Query: 147 LDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EK 199
+ YV+ + R+LF+ + N++ WN+M++G Q+ R F ++
Sbjct: 304 IAGYVQTKKMDIARELFE------SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR 357
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC----------------- 242
+ V+ ++I Y + G ++ L +F + ++D S GC
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEI-KQDGESLNRATFGCALSTCADIAALELGKQI 416
Query: 243 --------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ CF +AL+ MY C + EA F+ +V WN+M++GY
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE------KDVVSWNTMLAGY 470
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQV---HGLIVT 349
+ +A+T+ + ++G+ D T L AC LL+ + + + +G+I T
Sbjct: 471 ARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPT 530
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
S + + +IDL R G ++ A +L +P + +W L+ HG L
Sbjct: 531 SKHY------TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK +H + +K G F GN LL+MY S+++A+ F+ + K+
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+VSW TM+ Y + A+ ++ M G V+P+ VL ACS +G LD G
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGVLSACSHTGLLDRG 514
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/630 (30%), Positives = 332/630 (52%), Gaps = 51/630 (8%)
Query: 58 HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
HK+F M ++++++W TMV+ Y +R AIR + M+++G ++P+ + V A S
Sbjct: 54 HKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWG-IKPSPVSFVNVFPAISS 112
Query: 118 SGDLDLGRLIHERITREKLEY--DTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYG 173
GD +++ + + EY D ++++ + MY + G L RK+FD +A
Sbjct: 113 VGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAE--- 169
Query: 174 NVALWNSMLSGGKQ-------VHAFCVKRGFEK---EDVTLTSLIDMY--LKCGEIDDGL 221
+WN+M+ G Q V+ F E +DVT S + L+C + +
Sbjct: 170 ---VWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQM 226
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F M V+S T L+A++ MYS CN + + ++F++
Sbjct: 227 HAFT-MKNHTVLSVT------------VLNAILVMYSRCNSVQTSFEVFEKMPE------ 267
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
+V WN+MISG++ N +EE + L+ + G DS T TS L A NL N
Sbjct: 268 KDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRN--REIGK 325
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF--HRLPKKDVVAWSGLIMGCTK 399
Q H ++ G + D + S LID+YA+ G ++ + +F + + +D W+ +I G T+
Sbjct: 326 QTHAYLIRHGIKFDGM-DSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQ 384
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+GL A++ FR M+ N N ++S+L CS L S+ GKQ+H ++ ++
Sbjct: 385 NGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFV 444
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
T+L+DMY K G I+ ++F ER+ V++T +I+G GQ+G + A++ F M +S +
Sbjct: 445 RTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGI 504
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+ ITF+ VLSAC +AGLV+E IF SMK ++ ++P HY C+ D+LG+ G +A
Sbjct: 505 QPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAY 564
Query: 580 QLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPED--PSKYVMLSNVYA 636
+ + ++ + IW S+L AC H + +L ++ +LL + D V+LSN+YA
Sbjct: 565 EFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYA 624
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
W+++ K+RK+ ++ G K+ G SWI+
Sbjct: 625 EEANWETVDKLRKSMREKGLRKEVGCSWID 654
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 216/498 (43%), Gaps = 38/498 (7%)
Query: 20 KQGKSLHCRIIKYG--LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
K L+ ++K G + D+F ++ +SMYA+ L+ K+FD K+ W TM+
Sbjct: 117 KNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIG 176
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ N + L+ ++ + + + L A S L LG+ +H +
Sbjct: 177 GHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTV 236
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQV 188
++N +L MY +C S+ F+ + +V WN+M+SG G +
Sbjct: 237 LSVTVLNAILVMYSRCNSVQTS-FEVFEKMPEK---DVVSWNTMISGFIQNGLDEEGLML 292
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
K+GF + VT+TSL+ + G ++ R + + G+
Sbjct: 293 VYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLI-RHGIKFDGMD--------- 342
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
S L+DMY+ ++ ++++F+ + + A WN++I+GY N E+A
Sbjct: 343 --SYLIDMYAKSGLIRISQRVFENNNIQNR----DQATWNAVIAGYTQNGLVEQAFITFR 396
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ + ++ T S L AC +L + N Q+HG+ + + + V + L+D+Y++
Sbjct: 397 LMLEQNLRPNAVTLASILPACSSLGSIN--LGKQLHGVSIRYSLDQNIFVRTALVDMYSK 454
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G + A +F + +++ V ++ +I+G +HG+ A LF M S + +V
Sbjct: 455 SGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAV 514
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLALFKFMPER 486
L CS + G ++ +KR F+ + T + DM + G + + K + E
Sbjct: 515 LSACSYAGLVDEGLRIFE-SMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEE 573
Query: 487 DVV--SWTGIIVGCGQNG 502
V W ++ C +G
Sbjct: 574 GHVIEIWGSLLGACRLHG 591
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 175/451 (38%), Gaps = 111/451 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + AL Q + + G+ +H +K + N +L MY+ S+ + ++
Sbjct: 202 LDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEV 261
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M K++VSW TM++ + N + L M + G + + +++L A S +
Sbjct: 262 FEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFI-ADSVTVTSLLSAASNLRN 320
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQ-------YSNWAASA 171
++G+ H + R +++D + + L+DMY K G +++++F+ + W A
Sbjct: 321 REIGKQTHAYLIRHGIKFDG-MDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVI 379
Query: 172 YG------------------------NVALWNSMLSG---------GKQVHAFCVKRGFE 198
G N S+L GKQ+H ++ +
Sbjct: 380 AGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLD 439
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ T+L+DMY K G I+ ++F ER+ V++T +I+G
Sbjct: 440 QNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILG----------------- 482
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
YG + E A++L + SG+ D
Sbjct: 483 ----------------------YGQHGM-------------GENALSLFHSMKKSGIQPD 507
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNV 372
+ TF + L AC S L GL + + D+ + + + D+ R+G V
Sbjct: 508 AITFVAVLSAC-------SYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRV 560
Query: 373 KSALELFHRLPKKDVV--AWSGLIMGCTKHG 401
A E +L ++ V W L+ C HG
Sbjct: 561 IEAYEFVKQLGEEGHVIEIWGSLLGACRLHG 591
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 308/637 (48%), Gaps = 89/637 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y + N A LFD+M +++ SW M+T Y N R A RL++ M E V
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
++++L + +G +D R + + + E +++ N LL YV G +
Sbjct: 144 S-----WNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACL 194
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LF+ S+W ++ WN ++ G +++ ++ D
Sbjct: 195 LFESKSDW------DLISWNCLMGG--------------------------FVRKKKLGD 222
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF+ MP RD +SW +I G Y+ L +AR+LFD+ S
Sbjct: 223 ARWLFDKMPVRDAISWNTMISG---------------YAQGGGLSQARRLFDE------S 261
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+V W +M+SGYV N +EA T + N +++N+
Sbjct: 262 PTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK-----------------NEVSYNAMI 304
Query: 340 ALQVHGLIVTSGYEL-------DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
A V + EL + + +I Y ++G++ A + F +P++D V+W+
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G + G A +F ++ + +N+ L C+ +A+L GKQ+H VK G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ +L+ MY KCG ID+ F+ + E+DVVSW ++ G ++G ++A+ F+
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M + +KP+EIT +GVLSAC H GL++ F SM +YG+ P +HY CM+DLLG+A
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G ++A+ LI MPF+P W ++L A H NT+L AE + P++ YV+LS
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLS 604
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
N+YA G W K+R + +G +K G SW+EV +
Sbjct: 605 NLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQN 641
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 217/491 (44%), Gaps = 60/491 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+F+ N +L+ Y L DA +LFD M K++VSW ++++ Y N + A ++++M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 96 LEYGSVEPNGFMYSAVLKA---------------------CSLSGDLDLGRLIHERITRE 134
E S+ NG + + V C + G + +L R +
Sbjct: 169 PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 135 KLEY-DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF 191
K+ D + NT++ Y + G L+ R+LFD+ S +V W +M+SG Q
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGML 282
Query: 192 CVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ F EK +V+ ++I Y++ ++D LF MP R++ SW +I G
Sbjct: 283 DEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG----- 337
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
Y + +ARK FD + W ++I+GY + EEA+ +
Sbjct: 338 ----------YGQIGDIAQARKFFDMMPQ------RDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
I G ++ TF AL C ++ Q+HG V GY VG+ L+ +Y
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAAL--ELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G++ A + F + +KDVV+W+ ++ G +HG A +F M + ++ +
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499
Query: 427 SVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
VL CS L RG + ++ G T +ID+ + G +++ L + MP
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559
Query: 485 ERDVVSWTGII 495
+ SW ++
Sbjct: 560 QPGAASWGALL 570
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 175/408 (42%), Gaps = 66/408 (16%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D+ + N L+ + L DA LFD+M ++ +SW TM++ Y + A RL++
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE-- 260
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
S + F ++A++ +G LD + + E E + V N ++ YV+ +
Sbjct: 261 ---SPTRDVFTWTAMVSGYVQNGMLDEAKTFFD----EMPEKNEVSYNAMIAGYVQTKKM 313
Query: 157 --TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLID 209
R+LF+ + N++ WN+M++G Q+ R F +++ V+ ++I
Sbjct: 314 DIARELFE------SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-------------------------FE 244
Y + G ++ L +F + ++D S GC +
Sbjct: 368 GYAQSGHYEEALNMFVEI-KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
CF +AL+ MY C + EA F+ +V WN+M++GY + +A+
Sbjct: 427 TGCFVGNALLAMYFKCGSIDEANDTFEGIEE------KDVVSWNTMLAGYARHGFGRQAL 480
Query: 305 TLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQV---HGLIVTSGYELDYIVG 359
T+ + ++G+ D T L AC LL+ + + + +G+I TS +
Sbjct: 481 TVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY------ 534
Query: 360 SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
+ +IDL R G ++ A +L +P + +W L+ HG L
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK +H + +K G F GN LL+MY S+++A+ F+ + K+
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+VSW TM+ Y + A+ ++ M G V+P+ VL ACS +G LD G
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGVLSACSHTGLLDRG 514
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 37/134 (27%)
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+ GL++ F M EY + P +HY CM+DLLG+ D+
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRV-----------------DRLEE 818
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L A H NT+L A+ P++ +SK+R G
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQN-----------------SGISKMRDVGV-- 859
Query: 655 GEKKAGMSWIEVSS 668
+K G SW EV +
Sbjct: 860 -QKVPGYSWFEVQN 872
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 295/578 (51%), Gaps = 50/578 (8%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW 167
A+L S + L+ + +H ++ E + VL ++L + Y++ L F++ W
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 168 AASAYGNVALWNSMLSGGKQVHAFC----------VKRGFEKED-VTLTSLIDMYLKCGE 216
+ + WN++LSG + C ++R + D L I + G
Sbjct: 69 KRNRHS----WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 217 IDDG-----LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+++G LA+ N + + D V+ +LV+MY+ + A+K+FD
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVA----------------PSLVEMYAQLGTMESAQKVFD 168
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ N LW ++ GY+ ++ E L + +G+ +D+ T +KAC N
Sbjct: 169 EI------PVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 332 LLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ F + VHG+ + + + DY+ S +ID+Y + + +A +LF ++VV
Sbjct: 223 V--FAGKVGKCVHGVSIRRSFIDQSDYLQAS-IIDMYVKCRLLDNARKLFETSVDRNVVM 279
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G K A+ LFR M+ + NQ ++++L CS L SLR GK VH + +
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ G E + + TS IDMY +CG I +F MPER+V+SW+ +I G NG +EA+
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F +M + PN +TF+ +LSAC H+G V+E W F SM +YG+ P EHY CMVDLL
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A+ I MP KP + W ++L AC H L IAE+LL+ PE S YV
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYV 519
Query: 630 MLSNVYATLGMWDSLSKV-RKAGKKLGEKKAGMSWIEV 666
+LSN+YA GMW+ ++ V RK G K K G S EV
Sbjct: 520 LLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 176/454 (38%), Gaps = 108/454 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V A++ C ++ G +H +K GL +D + +L+ MYA ++ A K+
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE+ +N V W ++ Y + RL+ M + G + + ++KAC
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG-LALDALTLICLVKACGNVFA 225
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+G+ +H I R ++ L +++DMYVKC L RKLF+ S NV +
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE------TSVDRNVVM 279
Query: 178 WNSMLSG--------------------------------------------GKQVHAFCV 193
W +++SG GK VH + +
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
+ G E + V TS IDMY +CG I +F+ MPER+V+SW+ +I
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI-------------- 385
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+A+G +N EEA+ + S
Sbjct: 386 -------------------------NAFG-------------INGLFEEALDCFHKMKSQ 407
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ +S TF S L AC + N + Q + G + + ++DL R G +
Sbjct: 408 NVVPNSVTFVSLLSACSHSGNVKEGWK-QFESMTRDYGVVPEEEHYACMVDLLGRAGEIG 466
Query: 374 SALELFHRLPKKDVV-AWSGLIMGCTKHGLNSLA 406
A +P K + AW L+ C H LA
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIHKEVDLA 500
>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 878
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 206/748 (27%), Positives = 348/748 (46%), Gaps = 105/748 (14%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ S + G +HC +IK+GL +++ NNLLS+Y + +A KLFDEM ++ + +WT
Sbjct: 34 ESSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTV 93
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M++A+T ++ A+ L+ M+ G + PN F +S+V+++C+ GDL G +H + +
Sbjct: 94 MISAFTKSQEFASALSLFEEMMASG-IHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKT 152
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WA---ASAYGN------VALW 178
E ++V+ ++L D+Y KCG L R+LF N W +S G + +
Sbjct: 153 GFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFY 212
Query: 179 NSMLSGG-----------------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+ M+ G K +H+ + RG V TSL+ Y
Sbjct: 213 SEMIKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFS 272
Query: 216 EIDDGLALFNFMPERDVV-----------------------------------SWTGIIV 240
++D + + N E+DV +++ I+
Sbjct: 273 IMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILS 332
Query: 241 GC--------------------FECSCFTLSALVDMYSNCNVL-CEARKLFDQYSSWAAS 279
C FE S +ALV MY C+ EA ++F A
Sbjct: 333 LCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVF------GAM 386
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
NV W ++I G V + ++ LL + + + T + L+AC L R
Sbjct: 387 ISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYL--RL 444
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
L++HG ++ + + IVG++L+D YA G V A + + +D + ++ L+ +
Sbjct: 445 VLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNE 504
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G + +A + M ++Q + + + L + GK +H + VK GF
Sbjct: 505 LGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSV 564
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
L SL+DMY KCG ++D +F+ + DVVSW G++ G GR A++ F+EM
Sbjct: 565 LNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGT 624
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+ +TFL +LSAC L E F SMK + +EP +EHY +V +LG+AG ++A
Sbjct: 625 EPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEAT 684
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
++ M KP+ I+ ++L+AC H N L +A + LA +P DP+ Y++L+++Y G
Sbjct: 685 GVVETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESG 744
Query: 640 MWDSLSKVRKAGKKLGE-KKAGMSWIEV 666
+ K R + G KK S +EV
Sbjct: 745 KPELAQKTRNLMSEKGLCKKLSKSTVEV 772
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 327 KACINLLNF----NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
++CI +L+F +SR L +H ++ G + + +NL+ LY + + +A +LF +
Sbjct: 24 QSCIRILSFCESSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 83
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
P++ V AW+ +I TK + A LF +M+ S N+F SSV++ C+ L L G
Sbjct: 84 PQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGG 143
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+VH +K GFE + +SL D+Y KCG++ + LF + D +SWT +I
Sbjct: 144 RVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGAR 203
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+ EA+ ++ EMI++ + PNE TF+ +L A GL E TI +S+
Sbjct: 204 KWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSSI 249
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 292/540 (54%), Gaps = 33/540 (6%)
Query: 138 YDTVLMNTLLDMYVKCGSL-------TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
+D +L N L+ MY KCG L R L +W A G++ N + S + +
Sbjct: 5 FDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLES--LLLFS 62
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
G + D T ++ LK + +GL + + D+ TG F+
Sbjct: 63 KMGLSGVKPNDFTFST----NLKACGLLNGLDIGRQI--HDICVKTG-----FDMVNVVG 111
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
++++DMYS C + EA +F+ N+ WN+MI+GY + E+A+ L +
Sbjct: 112 NSIIDMYSKCGRINEAACMFE------VMPVRNLISWNAMIAGYTVAGFCEKALVLFQKM 165
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVGSNLIDLYAR 368
G +D +TFTS LKAC +L Q+H ++T G Y ++ V LIDLY +
Sbjct: 166 QEVGGFLDEFTFTSTLKACSDLGAIKE--GNQIHAFLITGGFLYSVNTAVAGALIDLYVK 223
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G + A +F + +K V++W+ LI+G + G + + LFR + S+ V+ FI+SS+
Sbjct: 224 CGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSM 283
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
+ V + A +++GKQ+HAF +K + S++DMYLKCG I++ LF MP R+V
Sbjct: 284 MGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNV 343
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
+SWT +I G G++G KEAI F EM +P+++T+L VL C H+GLVE+ F+
Sbjct: 344 ISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSR 403
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ +G++ +EHY CMVDLLG+AG +A+ L+ MP + + IW ++L AC H + +
Sbjct: 404 LCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLE 463
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
L + LL E+P YVM+SN+YA G W ++R+ KKL +K+AG SW+E+
Sbjct: 464 LGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKL-KKEAGRSWVEI 522
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 204/507 (40%), Gaps = 130/507 (25%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G D+ N+L+ MY L A +FD M ++N+VSWT ++ + N P ++ L+
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
+ M G V+PN F +S LKAC L LD+GR IH+ + + V+ N+++DMY K
Sbjct: 62 SKMGLSG-VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 153 CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------------------------- 184
CG + + + N+ WN+M++G
Sbjct: 121 CGRIN----EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFT 176
Query: 185 ----------------GKQVHAFCVKRGF--EKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
G Q+HAF + GF +LID+Y+KCG++ +F+
Sbjct: 177 FTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH 236
Query: 227 MPERDVVSWTGIIVG--------------------CFECSCFTLSAL------------- 253
+ E+ V+SWT +I+G + F LS++
Sbjct: 237 IEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG 296
Query: 254 ----------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+DMY C ++ EA +LF + + NV W MI
Sbjct: 297 KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR------NVISWTVMI 350
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQV---HGL 346
+GY + +EAI L + D T+ + L C + L+ + ++ HG+
Sbjct: 351 TGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGI 410
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSL 405
+ + ++DL R G +K A L +P + +V W L+ C HG L
Sbjct: 411 KARVEHY------ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLEL 464
Query: 406 AY----LLFRDMINSNQDVNQFIISSV 428
+L R ++S VN ++S++
Sbjct: 465 GKEVGGILLR--LDSENPVNYVMMSNI 489
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 110/195 (56%)
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G+ D ++ ++LI +Y + G + A ++F R+ K++VV+W+ L+ G ++G + LLF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M S N F S+ LK C L L G+Q+H CVK GF+ ++ S+IDMY KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G I++ +F+ MP R+++SW +I G G ++A+ FQ+M + +E TF L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 531 SACRHAGLVEEAWTI 545
AC G ++E I
Sbjct: 182 KACSDLGAIKEGNQI 196
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 17/172 (9%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++QGK +H IK DI N++L MY +N+A +LF EM +N++SWT M+T
Sbjct: 293 VQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITG 352
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI-----TR 133
Y + AIRL++ M + S EP+ Y AVL CS SG ++ G+ R+ +
Sbjct: 353 YGKHGLGKEAIRLFDEM-QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIK 411
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
++E+ ++D+ + G L + L D A NV +W ++LS
Sbjct: 412 ARVEH----YACMVDLLGRAGRLKEAKNLVDSMPLEA-----NVGIWQTLLS 454
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 292/610 (47%), Gaps = 32/610 (5%)
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+ W + +T + + A+ L+ M + G +EPN + +V KACS +L +++
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNG-LEPNNLTFPSVAKACSKLLNLKYSQIV 76
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H + + + + D + +++DMYVKC L Y+ ++ +VA WNSM+ G Q
Sbjct: 77 HTHVVKSRFQADLFVQTSVVDMYVKCSQLGFA----YNLFSRMPKRDVASWNSMILGFAQ 132
Query: 188 -------VHAFCVK--RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
V FC G + VT+ L L ++ ++ +F GI
Sbjct: 133 LGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF----------GI 182
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+G + + + Y+ C A +FD + WNSMI+GY E
Sbjct: 183 KIG-IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVS----WNSMIAGYAHFE 237
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q +A+ + G D T S L +C+ + HG+ V G + D V
Sbjct: 238 QCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQV--GCDSDIQV 295
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LI +Y++ G++ SA LF + K V+W+ +I G + G A LF M +
Sbjct: 296 INTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGE 355
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ I S++ C +L GK + + G + + +LID+Y KCG +D+
Sbjct: 356 KPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARE 415
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF MPE+ +VSWT +I GC NG KEA+ F +M++ LKPN ITFL VL AC HAG
Sbjct: 416 LFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGF 475
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+E+ W F M Y + P L+HY CM DLLG+ G +A + I MPFKPD IW+ +L
Sbjct: 476 LEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLL 535
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEK 657
AC+ H N + +A L P+ YV ++N+YA+ G WD ++ +R K K
Sbjct: 536 SACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMK 595
Query: 658 KAGMSWIEVS 667
G S ++V+
Sbjct: 596 SPGKSLVQVN 605
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 189/496 (38%), Gaps = 122/496 (24%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
+ C + ++K + +H ++K D+F +++ MY + L A+ LF M ++++
Sbjct: 62 KACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVA 121
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHM----LEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
SW +M+ + + + L+ M + SV G +SA+ SL DL +
Sbjct: 122 SWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSAL----SLK-DLKMLES 176
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + ++ D + NT + Y KCG L +FD + WNSM++G
Sbjct: 177 IHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVS----WNSMIAG 232
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
GK +HA ++ G + +
Sbjct: 233 YAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSD 292
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-------------------- 240
+ +LI MY KCG+I LF+ M + VSWT +I
Sbjct: 293 IQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEA 352
Query: 241 ---------------GCFECSCFTLSALVDMYSNCN------VLCEARKLFDQYSS---- 275
GC + L +D Y+ N ++C A L D Y+
Sbjct: 353 VGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNA--LIDVYAKCGSM 410
Query: 276 ------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
+ ++ W ++I+G LN + +EA+ L + G+ + TF + L+AC
Sbjct: 411 DNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQAC 470
Query: 330 INLLNFNSR----FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-K 384
N F + F L + G LD+ S + DL R G +K A E +P K
Sbjct: 471 -NHAGFLEKGWECFNLMTKVYKINPG--LDHY--SCMADLLGRKGRLKEAFEFIQNMPFK 525
Query: 385 KDVVAWSGLIMGCTKH 400
DV WS L+ C H
Sbjct: 526 PDVGIWSVLLSACKIH 541
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 291/604 (48%), Gaps = 64/604 (10%)
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
++T +V N A RL +HM + + F+++ +L + G L + + ++
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW---NSMLSGG 185
+ L+ D N LL Y K GS+ + FD+ + +Y NS
Sbjct: 84 M----LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++ + GFE + T+ S+++ + ++ G + IIV F
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHG-----------SIIVRNFLG 188
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F +AL DMY+ C + +AR LFD + N+ WN MISGY N Q E+ I
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTK------KNLVSWNLMISGYAKNGQPEKCIG 242
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
LL + SG+ D + S +I
Sbjct: 243 LLHQMR-------------------------------------LSGHMPDQVTMSTIIAA 265
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G V A +F +KD+V W+ +++G K+G A LLF +M+ + + + + +
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SSV+ C+ LASL G+ VH + G + ++LIDMY KCG IDD ++F MP
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R+VVSW +IVGC QNG K+A+ F+ M+Q + KP+ +TF+G+LSAC H +E+
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY 445
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F S+ ++G+ P L+HY CMV+LLG+ G + A LI M PD IW+++L C T
Sbjct: 446 FDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
+ + A L P Y+MLSN+YA++G W ++ VR K KK AG SWI
Sbjct: 506 DIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWI 565
Query: 665 EVSS 668
E+ +
Sbjct: 566 EIDN 569
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 198/495 (40%), Gaps = 127/495 (25%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQ--DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
C + I Q K L + ++ L Q D F N LL +YA F L DA LFD+M +++
Sbjct: 32 CVRTNEINQAKRLQSHM-EHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXF 90
Query: 71 SWTTMVTAY-------------------------------TSNKRPNWAIRLYNHMLEYG 99
SW +++AY + N P ++ L+ M G
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREG 150
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
EP + ++L A + DL G+ IH I + + N L DMY KCG +
Sbjct: 151 -FEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQ----------VHAFCVKRGFEKEDVTLTSL 207
R LFD + N+ WN M+SG + +H + G + VT++++
Sbjct: 210 RWLFDCLTK------KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS-GHMPDQVTMSTI 262
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSC 247
I Y +CG +D+ +F+ E+D+V WT ++VG E
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 248 FTLS-----------------------------------ALVDMYSNCNVLCEARKLFDQ 272
+TLS AL+DMYS C + +AR +F+
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI-- 330
+ NV WN+MI G N +++A+ L ++ D+ TF L AC+
Sbjct: 383 MPT------RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 331 NLLNFNSRFALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KD 386
N + + + HG+ T LD+ +++L R G ++ A+ L + D
Sbjct: 437 NWIEQGQEYFDSISNQHGMTPT----LDHYAC--MVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 387 VVAWSGLIMGCTKHG 401
+ WS L+ C+ G
Sbjct: 491 FLIWSTLLSICSTKG 505
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 163/385 (42%), Gaps = 47/385 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L Q ++ GK +H II ++F N L MYA + A LFD +
Sbjct: 158 IVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLT 217
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+KN+VSW M++ Y N +P I L + M G + P+ S ++ A G +D R
Sbjct: 218 KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHM-PDQVTMSTIIAAYCQCGRVDEAR 276
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLF------------DQYSNWAASAYG 173
R+ E E D V ++ Y K G L D Y+ +S
Sbjct: 277 ----RVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYT--LSSVVS 330
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+ A S L G+ VH + G + ++LIDMY KCG IDD ++FN MP R+VV
Sbjct: 331 SCAKLAS-LHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
SW +IVGC + +A +LF+ NV + +
Sbjct: 390 SWNAMIVGCAQNGHDK---------------DALELFENMLQQKFKP-DNVTFIGILSAC 433
Query: 294 YVLN--EQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-INLLNFNSRFALQVHGLIVTS 350
N EQ +E +S+ H +D Y AC +NLL R Q LI
Sbjct: 434 LHCNWIEQGQEYFDSISNQHGMTPTLDHY-------ACMVNLLGRTGRIE-QAVALIKNM 485
Query: 351 GYELDYIVGSNLIDLYARLGNVKSA 375
++ D+++ S L+ + + G++ +A
Sbjct: 486 AHDPDFLIWSTLLSICSTKGDIVNA 510
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 307/653 (47%), Gaps = 106/653 (16%)
Query: 112 LKACSLSGDLDLGRLIHERITREK--LEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNW 167
L+ C GD GR +H R+ + + DT N LL+ Y K G L R+LFD
Sbjct: 52 LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111
Query: 168 AASAYGNV--------------ALWNSMLSGGKQV------------------------H 189
++ + L+ + G +V H
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------- 240
A K G ++ T+LID Y CG + +F+ + +D V+WT ++
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPE 231
Query: 241 --------------------------------------GCFECSCFTL--------SALV 254
G CS TL AL+
Sbjct: 232 YALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALL 291
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMY+ C + +A +F+ + +V LW+ +IS Y + QNE+A + + S
Sbjct: 292 DMYAKCGDIEDAHAIFEMIP------HDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSF 345
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ + ++ + L+AC N+ Q+H L + GYE + VG+ L+D+YA+ N+++
Sbjct: 346 VVPNEFSLSGVLQACANIAFL--ELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMEN 403
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
+LE+F L + V+W+ +I+G + G A +F +M ++ Q SSVL+ C+
Sbjct: 404 SLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACAN 463
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+S++ Q+H+ K F + I SLID Y KCG I D L +F+ + E DVVSW I
Sbjct: 464 TSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSI 523
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I +GRA A+ F M +S +K N++TF+ +LS C GLV + +F SM ++
Sbjct: 524 ISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHR 583
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
++P +EHY C+V LLG+AG DA + I ++P P +W ++L +C H N L A
Sbjct: 584 IKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAA 643
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
E++L P D + YV+LSN+YA G+ D ++ RK+ + +G KK AG+SW+E+
Sbjct: 644 EKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEI 696
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 160/672 (23%), Positives = 272/672 (40%), Gaps = 155/672 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H R+++ G ++Q D F N LL+ YA L A +LFD M +
Sbjct: 52 LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N VS+ T++ Y A+ L+ + G E N F+ + +LK L I
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGH-EVNHFVLTTILKVLVTMDAPGLACGI 170
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNWAA--SAYG----- 173
H + + + + L+D Y CG++ R +FD W A S Y
Sbjct: 171 HACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIP 230
Query: 174 -----------------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
N + S L GK +H VK ++ E +L
Sbjct: 231 EYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGAL 290
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSW-------------------------------- 235
+DMY KCG+I+D A+F +P DV+ W
Sbjct: 291 LDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNE 350
Query: 236 ---TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+G++ C +E F +AL+DMY+ C + + ++F
Sbjct: 351 FSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSS 410
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
N WN++I GY + E+A+++ + ++ M TF+S L+AC N
Sbjct: 411 LQD------ANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANT 464
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+ + A+Q+H LI S + D IV ++LID YA+ G ++ AL++F + + DVV+W+
Sbjct: 465 SSI--KHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNS 522
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I HG + A LF M S+ N S+L VC
Sbjct: 523 IISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCG------------------- 563
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFM-----PERDVVSWTGIIVGCGQNGRAKEA 507
G ++ GL LF M + + +T I+ G+ GR +A
Sbjct: 564 ----------------STGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDA 607
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSAC-RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
+ + ++ + P+ + + +LS+C H + + + + +EPH E Y ++
Sbjct: 608 LKFIGDIPST---PSPMVWRALLSSCVVHKNVALGRY----AAEKVLDIEPHDETTYVLL 660
Query: 567 -DLLGQAGCFDD 577
++ AG D+
Sbjct: 661 SNMYAAAGILDE 672
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 10/286 (3%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVGSNLIDLYARLGNVKS 374
+DSY L+ CI ++R VH +V G +LD + L++ YA+LG + +
Sbjct: 43 LDSYACARFLQRCIA--RGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLAT 100
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A LF +P+++ V++ L+ G G A LFR + +VN F+++++LKV
Sbjct: 101 ARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVT 160
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ + +HA K G ++ T+LID Y CG + +F + +D V+WT +
Sbjct: 161 MDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAM 220
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA--CRHAGLVEEAWTIFTSMKPE 552
+ +N + A+ F +M + KPN L A C + L+ + S+K
Sbjct: 221 VSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIH-GCSVKTL 279
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
Y EPH+ ++D+ + G +DA + +P D +W+ ++
Sbjct: 280 YDTEPHVGG--ALLDMYAKCGDIEDAHAIFEMIPHD-DVILWSFLI 322
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 266/487 (54%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ+HA +K G + TSLI MY + G ++D +F+ RDVVS+T +I G
Sbjct: 97 GKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG--- 153
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + +A+K+FD+ +V WN+MISGY + +EA+
Sbjct: 154 ------------YASRGNMDKAQKMFDEI------PIKDVVSWNAMISGYAEIGRYKEAL 195
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + L C + + N Q+H I G+ + + + LID
Sbjct: 196 ELFNEMMKMDVKPDESTMATVLSTCTH--SGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G ++ A LF L KDV++W+ LI G + A L+F++M+ + N
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + K+ G TSLIDMY KCG I+ +F
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + + S +I G +GRA A M + ++P++ITF+G+LSAC HAGL +
Sbjct: 374 ILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLG 433
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y +EP LEHY CM+DLLG++G F +AE+LI M +PD IW S+LKAC+
Sbjct: 434 RKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACK 493
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L +IA++L+ P++P YV+LSN+YAT WD +++VR G KK G
Sbjct: 494 IHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGC 553
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 554 SSIEIDS 560
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 197/438 (44%), Gaps = 74/438 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
+ C + ++ ++GK +H +I+KYGL+ D+ +L+SMYA + DAH
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
K+FDE+ K++VSW M++ Y R A+ L+N M++
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
V+P+ + VL C+ SG+++LGR IH I + L+N L+D+Y KCG + R
Sbjct: 205 -DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSLID 209
+ + Y +V WN+++ G ++ +K G DVT+ S++
Sbjct: 264 ----AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILP 319
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
G ID G + ++ ++ GII + ++L+DMY+ C + A ++
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKK----LKGIIT-----NTSLQTSLIDMYAKCGNIEAANQV 370
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD + + S+ N+MI G+ ++ + + A LLS + G+ D TF L AC
Sbjct: 371 FDTILNKSLSS------CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSAC 424
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP 383
S L G + LDY + L IDL R G K A EL + +
Sbjct: 425 -------SHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT 477
Query: 384 -KKDVVAWSGLIMGCTKH 400
+ D V W L+ C H
Sbjct: 478 MEPDGVIWGSLLKACKIH 495
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 34/327 (10%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN+MI G+ L+ A+ L ++ S G+ +SYTF K+C + ++ Q+H
Sbjct: 46 WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK--SKAAQEGKQIHAQ 103
Query: 347 IVTSGYELDYIVGSNLIDLYAR-------------------------------LGNVKSA 375
I+ G +D V ++LI +YA+ GN+ A
Sbjct: 104 ILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKA 163
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F +P KDVV+W+ +I G + G A LF +M+ + ++ +++VL C+
Sbjct: 164 QKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHS 223
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
++ G+Q+H++ GF + +LID+Y KCGE++ LF+ + +DV+SW +I
Sbjct: 224 GNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLI 283
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYG 554
G KEA+ FQEM++ PN++T L +L AC H G ++ W K G
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 343
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ + ++D+ + G + A Q+
Sbjct: 344 IITNTSLQTSLIDMYAKCGNIEAANQV 370
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 126/585 (21%), Positives = 214/585 (36%), Gaps = 172/585 (29%)
Query: 30 IKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
IK GL + + LL + F L A +F + N +SW TM+ + + P
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A+ LY +M+ G + PN + + + K+C+ S G+ IH +I + L D + +L
Sbjct: 61 SALNLYVYMISLG-LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119
Query: 147 LDMYVKCGSL--TRKLFDQYSNWAASAY----------GN---------------VALWN 179
+ MY + G + K+FD S+ +Y GN V WN
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+M+SG G+Q+H++
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
GF + +LID+Y KCGE++ LF + +DV+SW +I G
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGG-------------- 285
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y ++EA+ + + G
Sbjct: 286 --------------------------------------YAYINHHKEALLVFQEMLKLGE 307
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ T S L AC +L + + V+ G + + ++LID+YA+ GN+++A
Sbjct: 308 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F + K + + + +I G HG A+ L M
Sbjct: 368 NQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRM---------------------- 405
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-----ERDVVS 490
K G E +DIT L+ G D G +FK M E +
Sbjct: 406 -------------KKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEH 452
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSACR 534
+ +I G++G KEA +E+I S ++P+ + + +L AC+
Sbjct: 453 YGCMIDLLGRSGLFKEA----EELINSMTMEPDGVIWGSLLKACK 493
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 40/292 (13%)
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNS---LAYLLFRDMINSNQDVNQFIISSVLKV 431
A+ +F + + + ++W+ +I G H L+S A L+ MI+ N + + K
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRG---HALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ + + GKQ+HA +K G + TSLI MY + G ++D +F RDVVS+
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 492 TGIIVGCGQN-------------------------------GRAKEAIAYFQEMIQSRLK 520
T +I G GR KEA+ F EM++ +K
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+E T VLS C H+G VE I + + +G +L+ ++DL + G + A
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWID-NHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
L + +K D W +++ N+ K ++ +++L E P+ MLS
Sbjct: 267 LFEGLQYK-DVISWNTLIGGYAYINHHKEALLVFQEMLKLG-ETPNDVTMLS 316
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C +++ G+ +H I +G ++ N L+ +Y+ + AH LF
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + K+++SW T++ Y A+ ++ ML+ G PN ++L AC+ G +
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGET-PNDVTMLSILPACAHLGAI 327
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + +T L +L+DMY KCG++ ++FD N + S+
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSS------ 381
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
N+M+ G G+ AF + K G E +D+T L+ G D G +F M
Sbjct: 382 CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSM 440
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/696 (27%), Positives = 342/696 (49%), Gaps = 85/696 (12%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+++H + +K L +DIF GN L+S Y + DA K+F ++ N+VS+T +++ ++
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ + A+ L+ ML+ G +EPN + + A+L AC + D LG +H + + L
Sbjct: 174 SDWEDEAVELFFAMLDSG-IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVF 232
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N L+ +Y KCG L +LF++ ++ WN+++S
Sbjct: 233 ICNALMGLYCKCGFLDLVLRLFEEMPE------RDITSWNTVISSLVKEFKYDEAFDYFR 286
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
G+Q+HA +K G E +SLI Y KC
Sbjct: 287 GMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKC 346
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G +D LF MP RDV++WTG+I Y +L A ++F++
Sbjct: 347 GSANDVTDLFETMPIRDVITWTGMITS---------------YMEFGMLDSAVEVFNKMP 391
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N +N++++G N+ A+ L + G+ I T TS + AC L +
Sbjct: 392 K------RNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH-RLPKKDVVAW-SG 392
F + + Q+ G ++ G + + + L+D+Y R G ++ A ++F+ R + D A +
Sbjct: 446 F--KVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTS 503
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G ++G + A LF + V ++ + +S+L +C + G Q+H +K
Sbjct: 504 MICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKS 563
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G E + + MY KC +DD + +F M +D+VSW G++ G + + +A+ +
Sbjct: 564 GLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIW 623
Query: 512 QEMIQSRLKPNEITFLGVLSACRHA--GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
++M ++ +KP+ ITF ++SA +H LV+ ++F SM+ E+ ++P LEHY + +L
Sbjct: 624 KKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVL 683
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+ G ++AEQ I MP +PD +W ++L +C + N +L + A +LA P+DP Y+
Sbjct: 684 GRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYI 743
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+ SN+Y+ G W KVR+ ++ G K SWI
Sbjct: 744 LKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWI 779
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L CG + G +HC +K GL + GN +SMY+ +++DA ++
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRV 591
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
F+ M ++IVSW +V + + + + A+ ++ M E ++P+ ++ ++ A
Sbjct: 592 FNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM-EKAGIKPDSITFALIISA 644
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 242/434 (55%), Gaps = 18/434 (4%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
FE F SALVDMYS C L +AR LFD+ S + N+ W SMI+GYV N+
Sbjct: 183 FEPDLFVSSALVDMYSKCGELRDARTLFDEIS------HRNIVSWTSMITGYVQNDDAHR 236
Query: 303 AITLLSH--IHSSG------MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
A+ L + SG +C+D S L AC + VHG ++ G+E
Sbjct: 237 ALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRV--SEKSITEGVHGFLIKRGFEG 294
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V + L+D YA+ G + + +F + ++DV++W+ +I ++G+++ + +F M+
Sbjct: 295 DLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMV 354
Query: 415 NSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + N +S+VL C+ S R GK +H +K G E TS+IDMY KCG++
Sbjct: 355 KDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 414
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+ F M E++V SW+ ++ G G +G AKEA+ F EM + +KPN ITF+ VL+AC
Sbjct: 415 EMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC 474
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
HAGL+EE W F +M E+ +EP +EHY CMVDLLG+AG +A LI M +PD +
Sbjct: 475 SHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 534
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W ++L AC H N L I A +L P++ YV+LSN+YA G W+ + ++R K
Sbjct: 535 WGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKN 594
Query: 654 LG-EKKAGMSWIEV 666
G K G S +++
Sbjct: 595 SGLVKPPGFSLVDI 608
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 167/335 (49%), Gaps = 13/335 (3%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WNS+I+ + + EA+ S + + + TF A+K+C LL+ +S Q
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHS--GRQ 173
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
H + G+E D V S L+D+Y++ G ++ A LF + +++V+W+ +I G ++
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233
Query: 403 NSLAYLLFRDMI----NSNQD----VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
A LLF++ + S D V+ + SVL CS ++ + VH F +KRGFE
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ +L+D Y KCGE+ +F M ERDV+SW II QNG + E++ F M
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 353
Query: 515 IQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
++ + N +T VL AC H+G I + + GLE ++ ++D+ + G
Sbjct: 354 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSIIDMYCKCG 412
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ A + M K K+ W++M+ H + K
Sbjct: 413 KVEMARKAFDRMREKNVKS-WSAMVAGYGMHGHAK 446
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 179/452 (39%), Gaps = 124/452 (27%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A++ C + G+ H + + +G D+F + L+ MY+ L DA LFDE++ +N
Sbjct: 158 AIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRN 217
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHML--EYGS-------VEPNGFMYSAVLKACSLSG 119
IVSWT+M+T Y N + A+ L+ L E GS V+P + +VL ACS
Sbjct: 218 IVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMV--SVLSACSRVS 275
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+ + +H + + E D + NTL+D Y KCG L +R++FD A +V
Sbjct: 276 EKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFD------GMAERDVIS 329
Query: 178 WNSML-----------------------------------------SG----GKQVHAFC 192
WNS++ SG GK +H
Sbjct: 330 WNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQV 389
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
+K G E TS+IDMY KCG+++ F+ M E++V SW+ ++ G
Sbjct: 390 IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAG----------- 438
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y ++ +EA+ + ++
Sbjct: 439 -----------------------------------------YGMHGHAKEALEVFYEMNM 457
Query: 313 SGMCIDSYTFTSALKAC--INLLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+G+ + TF S L AC LL F H V G E Y ++DL R
Sbjct: 458 AGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE-HY---GCMVDLLGRA 513
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G +K A +L + + D V W L+ C H
Sbjct: 514 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Query: 6 IVEALRHCGQ--RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+V L C + +SI +G +H +IK G D+ N L+ YA L + ++FD
Sbjct: 264 MVSVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDG 321
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
MA ++++SW +++ Y N ++ +++ M++ G + N SAVL AC+ SG L
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ IH+++ + LE + + +++DMY KCG + RK FD+ NV W++M
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE------KNVKSWSAM 435
Query: 182 LSG-GKQVHA 190
++G G HA
Sbjct: 436 VAGYGMHGHA 445
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 365 LYARLGNVKSALELFHR-LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
L R N + LF++ + K +V +W+ +I + G + A F M + N+
Sbjct: 94 LRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRS 153
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+K CS L L G+Q H + GFE + ++L+DMY KCGE+ D LF +
Sbjct: 154 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 213
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI--------QSRLKPNEITFLGVLSAC 533
R++VSWT +I G QN A A+ F+E + + + I + VLSAC
Sbjct: 214 SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSAC 271
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/646 (29%), Positives = 320/646 (49%), Gaps = 44/646 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+L +V LR C ++ G+ +H +++ G+S D GN L+ MY +++A +
Sbjct: 119 NLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVL 174
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM +++++SW M++ Y + +R M + G + P Y+ +L ACS DL
Sbjct: 175 REMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDG-LSPTKVTYATLLNACSSGEDL 233
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ IH + L+ D V+ + LL MY KCGSL D + N WN++
Sbjct: 234 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLE----DVKRSSCEVHERNTIAWNTI 289
Query: 182 LSG-GKQVHAFCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
+ + F R F++ + VT ++ + G+ L +++ +
Sbjct: 290 IGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQ--- 346
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+ + IIV ++L MY+ C L ARK+F+ S N WNS+IS
Sbjct: 347 LGFESIIVH---------NSLTAMYAKCGSLDAARKMFEGMPSR------NSVSWNSLIS 391
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
+ + +A + G D T S L AC N++ +H ++V SG+
Sbjct: 392 AAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTK--QANAKEGSSIHQMVVESGF 449
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+ V + LI +YA+LG+ ++A +F + +++ V+W+ ++ + GLN A +F
Sbjct: 450 DKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWK 509
Query: 413 MINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEK--EDITLTSLIDMYLK 469
M + V + L CS LA L GK +H + + GF + + T+L++MY K
Sbjct: 510 MDVARDKVTYV---AALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGK 566
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + + +F M RDVV+WT +IV Q+ ++A+ + M Q +K +++ FL +
Sbjct: 567 CGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSI 626
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LS C H+GL+EE F SM +YG+ P LEHY C++D+LG+AG D AE+L+ +P +
Sbjct: 627 LSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRS 686
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D +W ++L AC H N + A ++ P P+ YV+LSN+Y
Sbjct: 687 DSKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/622 (24%), Positives = 264/622 (42%), Gaps = 104/622 (16%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
A+ LY M G V P+ + L+AC++ G LD GR +H I LE D N L+
Sbjct: 2 ALELYKRMQLEG-VRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 148 DMYVKCGS-------LTRKLFDQYSNWAASAYGNVALWNSM------------------- 181
+MY KC S +R +W S GN A + +
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSW-TSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119
Query: 182 ------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
L+ G+QVH + ++ G + +L+DMY K G++D+ + MP+
Sbjct: 120 LITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPK 179
Query: 230 RDVVSWTGIIVG------CFE-CSCF-------------TLSALVDMYSNCNVLCEARKL 269
RDV+SW +I G C E C T + L++ S+ L E + +
Sbjct: 180 RDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSI 239
Query: 270 F-----------DQYSSWAASAYG------------------NVALWNSMISGYVLNEQN 300
+ S+ YG N WN++I Y +
Sbjct: 240 HRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDH 299
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+A+ + G+ D+ TF L C + + + +H I G+E IV +
Sbjct: 300 FQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQ--GILLHDWISQLGFE-SIIVHN 356
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+L +YA+ G++ +A ++F +P ++ V+W+ LI +HG + A+ F+ M
Sbjct: 357 SLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRP 416
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++ S+L C+ A+ + G +H V+ GF+K +LI MY K G+ + +F
Sbjct: 417 DEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVF 476
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH-AGLV 539
M ER+ VSW I+ + G ++A+ F +M +R +++T++ L AC AG +
Sbjct: 477 DAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMDVAR---DKVTYVAALDACSGLAGGL 533
Query: 540 EEAWTIFTSMKPEYGLEPHLEHY--YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
I M ++G L+ +V++ G+ G +A ++ EM + D W S+
Sbjct: 534 AHGKLIHGYM-LDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHR-DVVTWTSL 591
Query: 598 LKACETHNNT----KLVSIIAE 615
+ A H+ KLV I+ +
Sbjct: 592 IVAYAQHSEIEQALKLVKIMEQ 613
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A+ L + G+ DS TF + L+AC + +VH I SG E D +
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDD--GRKVHAYIRESGLETDIYAANA 58
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG-LNSLAYLLFRDMINSNQDV 420
LI++Y + + + A +LF R+ +VV+W+ +I ++G L + LLFR M
Sbjct: 59 LINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRP 118
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N + +VL+ C +L G+QVH + ++ G + +L+DMY K G++D+ +
Sbjct: 119 NLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVL 174
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ MP+RDV+SW +I G Q+G KE + M Q L P ++T+ +L+AC +
Sbjct: 175 REMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLG 234
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E +I S+ + GL+ ++ + G+ G +D ++ E+ + + W +++ A
Sbjct: 235 EGKSIHRSV-VDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEV-HERNTIAWNTIIGA 292
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 318/646 (49%), Gaps = 40/646 (6%)
Query: 39 FTGNNLL-----SMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
F+G+ LL Y + DA +F + N+ SWT ++ AY N + L
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVK 152
M G V PN + V+ A S GD D R IH R +L YD VL+ L+DMY K
Sbjct: 172 QMDLLG-VWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAK 230
Query: 153 CGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLID 209
CG + +FDQ N ++A N+M+S Q+ G+ + V T +
Sbjct: 231 CGDIFHAEVVFDQARN------KDLACCNAMISAYIQL-------GYTVDAVSTFNRIQP 277
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS-----CFTLSALVDMYSNCNVLC 264
L+ ++ L LF V S + CF S +ALV MYS C L
Sbjct: 278 SGLQPNQVTYAL-LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLE 336
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+AR++FD+ NV WN MI+GY +EA+ L + ++G+ D TF +
Sbjct: 337 DARRVFDRMPG------KNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVN 390
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--L 382
L++C L + +H +V +GY+ V S LI +Y+ G++ A+++FH+
Sbjct: 391 VLESCS--LAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVT 448
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
V++W+ ++ T++G A LFR M N S + CS + +L G
Sbjct: 449 THSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGH 508
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+ + G+ + + TSLI++Y KCG +D L +F + +++V+W I+ QNG
Sbjct: 509 AIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNG 568
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ QEM +PNE+T L +L C H GLV +A + F SM + L P EHY
Sbjct: 569 EETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHY 628
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C+VDLLG++G ++ E I+ PF D +W S+L +C H++ + A ++L P
Sbjct: 629 GCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDP 688
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVS 667
++ S YV+LSN++A +GM D++ + K AG++ +K+ S+IEV+
Sbjct: 689 KNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVN 734
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 224/496 (45%), Gaps = 46/496 (9%)
Query: 21 QGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ + +H R L+ D+ L+ MYA + A +FD+ K++ M++AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
A+ +N + G ++PN Y+ + +AC+ +G R+ H KL D
Sbjct: 260 IQLGYTVDAVSTFNRIQPSG-LQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPD 318
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQV 188
V+ L+ MY +CGSL R++FD+ NV WN M++G Q+
Sbjct: 319 VVVNTALVSMYSRCGSLEDARRVFDRMPG------KNVVTWNVMIAGYAQEGYTDEALQL 372
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ G E +++T ++++ C + + RD+ ++ ++ S
Sbjct: 373 YVSMEAAGVEPDEITFVNVLE---SCSLAE------HLAAGRDI--HKHVVDAGYDSSLT 421
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
LSAL+ MYS C L +A +F + + + +V W +M++ N + A+ L
Sbjct: 422 VLSALITMYSACGSLGDAVDVFHK----GVTTHSSVISWTAMLTALTRNGEGRSALALFR 477
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ G+ + TF S + AC ++ A + ++ +GY +D ++G++LI+LY +
Sbjct: 478 KMDLEGVKANVVTFVSTIDACSSIGALVEGHA--IFERVIVTGYLIDVVLGTSLINLYGK 535
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G + ALE+FH L K++V W+ ++ +++G +L+ L ++M N+ + ++
Sbjct: 536 CGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNM 595
Query: 429 LKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
L CS + + V+ C+ E L+D+ + G++++ A
Sbjct: 596 LFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEH----YGCLVDLLGRSGQLEEVEAFISSK 651
Query: 484 P-ERDVVSWTGIIVGC 498
P D V W ++ C
Sbjct: 652 PFSLDSVLWMSLLGSC 667
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 200/484 (41%), Gaps = 64/484 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C + H I L D+ L+SMY+ SL DA ++FD M KN+
Sbjct: 291 FRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNV 350
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y + A++LY M E VEP+ + VL++CSL+ L GR IH+
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSM-EAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + +++ L+ MY CGSL + D + + + +V W +ML+
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAV-DVFHK-GVTTHSSVISWTAMLTALTRNG 467
Query: 185 -GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+ A K G + VT S ID G + +G A+F ER +V TG ++
Sbjct: 468 EGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIF----ERVIV--TGYLI 521
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
++L+++Y C L A ++F S + N+ WN++++ N +
Sbjct: 522 -----DVVLGTSLINLYGKCGRLDYALEVFHHLS------FKNIVTWNTILAASSQNGEE 570
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHG--LIVTSGYELD 355
+ LL + G + T + L C + + S F V+G L+ TS +
Sbjct: 571 TLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHY-- 628
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH-----GLNSLAYLL 409
L+DL R G ++ P D V W L+ C H GL + +L
Sbjct: 629 ----GCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVL 684
Query: 410 FRDMINSNQDV---NQFIISSVLKVCSCLASL---RRGKQ------------VHAFCVKR 451
D N++ V N F +L LA L R K+ VH F V+
Sbjct: 685 GLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRA 744
Query: 452 GFEK 455
G +
Sbjct: 745 GLHR 748
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V + C ++ +G ++ R+I G D+ G +L+++Y L+ A ++F ++
Sbjct: 492 VSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSF 551
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
KNIV+W T++ A + N + L M + +PN +L CS +G
Sbjct: 552 KNIVTWNTILAASSQNGEETLSAELLQEM-DLDGAQPNEMTLLNMLFGCSHNG 603
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 237/421 (56%), Gaps = 8/421 (1%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L+AL++MYS+CN AR + D WA+ +V WN++I+GY+ +A+
Sbjct: 129 FVLNALINMYSSCNYPASARLVLDSAPRWAS----DVVSWNTIIAGYIRGGMPNKALQSF 184
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + +D T + L AC + H L+V +G+E++ +GS+L+ +YA
Sbjct: 185 HQMAKEQVRLDEVTLLNVLVACAR--TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYA 242
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G V+ A +F+R+P+++VV W+ +I GCT+ G A LFRDM + + I++
Sbjct: 243 KCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIAT 302
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ C + +L G+ +HA+C G KE SLIDMY KCG+++ +F + +RD
Sbjct: 303 VVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRD 362
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
V +WT +I+G NG EA+ F +M + ++ PNE+ FLGVL+AC H GLVE+ + F
Sbjct: 363 VFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHF 422
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M Y L P +EHY CMVDLLG+A +AEQ I +MP PD +W S+L AC
Sbjct: 423 HRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQ 482
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIE 665
L AE++ P+ +V+LSNVYAT W ++ VR G KK G S+IE
Sbjct: 483 VGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIE 542
Query: 666 V 666
V
Sbjct: 543 V 543
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 195/428 (45%), Gaps = 48/428 (11%)
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAA 169
+ A + LD+G H + L D+ ++N L++MY C + R + D WA+
Sbjct: 100 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 159
Query: 170 SAYGNVALWNSMLSG-------GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
+V WN++++G K + +F K ++VTL +++ + G + G
Sbjct: 160 ----DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVG 215
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+L + + +++ FE +C+ S+LV MY+ C ++ EAR++F++
Sbjct: 216 -SLCHAL----------VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER---- 260
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
NV W SMI+G + + +EA+ L + +G+ D T + + +C + +
Sbjct: 261 --NVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRY 318
Query: 341 LQV----HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
L HGL G EL V ++LID+Y++ G+V A ++FH L K+DV W+ +IMG
Sbjct: 319 LHAYCDGHGL----GKELS--VKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMG 372
Query: 397 CTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFE 454
+GL A LF M ++ + N+ I VL CS + +G H
Sbjct: 373 FAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLV 432
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC---GQNGRAKEAIAY 510
++D+ + + + K MP DVV W ++ C GQ G A+ A
Sbjct: 433 PRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAER 492
Query: 511 FQEMIQSR 518
+++ R
Sbjct: 493 IEQLEPKR 500
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-- 66
A+ + S+ G H +K L+ D F N L++MY+ A + D R
Sbjct: 99 AISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWA 158
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++VSW T++ Y PN A++ + H + V + VL AC+ +G + +G L
Sbjct: 159 SDVVSWNTIIAGYIRGGMPNKALQSF-HQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 217
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H + E + + ++L+ MY KCG + R++F++ NV W SM++G
Sbjct: 218 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER------NVVCWTSMIAG 271
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ +HA+C G KE
Sbjct: 272 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKE 331
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG+++ +F+ + +RDV +WT +I+G
Sbjct: 332 LSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMG 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C + ++K G H ++ G + + G++L+SMYA + +A ++
Sbjct: 194 LDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRV 253
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +N+V WT+M+ T + R A+ L+ M + V+ + + V+ +C G
Sbjct: 254 FNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDM-QIAGVKADDATIATVVSSCGQMGA 312
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LDLGR +H L + + N+L+DMY KCG + + Y + +V W
Sbjct: 313 LDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKA----YQIFHGLTKRDVFTWTV 368
Query: 181 MLSG----GKQVHAFCVKRGFEKED 201
M+ G G V A + E ED
Sbjct: 369 MIMGFAMNGLCVEALDLFAQMEGED 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + CGQ ++ G+ LH +GL +++ N+L+ MY+ +N A+++F +
Sbjct: 300 IATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLT 359
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++ +WT M+ + N A+ L+ M V PN ++ VL ACS G ++ G
Sbjct: 360 KRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGY 419
Query: 126 LIHERITR 133
R+++
Sbjct: 420 HHFHRMSK 427
>gi|125578267|gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
Length = 786
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 312/643 (48%), Gaps = 54/643 (8%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
K G F N L YA L+ A K+FDEM +N+VSWT MV+A T N P+ R
Sbjct: 15 KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKAC-----SLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+ M+ G PN F + +L AC S+S LGR +H + LE +T +MN+
Sbjct: 75 FFVSMIRSGFC-PNEFSLATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNS 133
Query: 146 LLDMYVKC------GSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAFCV 193
L+DMY + S+ RK+ + + WN+M SG K V + +
Sbjct: 134 LVDMYFRARQKETAASVFRKIRQK----------DTVSWNTMFSGFAHDEDDKAVFGYLI 183
Query: 194 ---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ GF+ +VT + L+ + GL +F + +
Sbjct: 184 DMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG-----------YTDNVLVA 232
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+A+++M C +L A Y + + + N+ WN +I+GY L +E+A+ L +
Sbjct: 233 NAVINMLFRCGLLDRA------YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSL 286
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL-YARL 369
G D +T+++ L A +R Q+H +I+ G+ V ++LI A
Sbjct: 287 VCIGERPDEFTYSAVLSAFQEA--HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAF 344
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIISSV 428
G+V+S+L++ K ++V+W +I KHGLN LF +S ++FI+++V
Sbjct: 345 GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATV 404
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE--R 486
L C+ A +R + +H+ +K G ++++D Y KCGEI + F +
Sbjct: 405 LNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATN 464
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D + + ++ +G EA+ ++EM +++L P TF+ +LSAC H GLVE+ F
Sbjct: 465 DAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAF 524
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
++M YG+ P +Y C+VDLL + G D+A+ +I MPF+P +W S++ C H N
Sbjct: 525 STMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGN 584
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
+L + AEQ+L +P YV LSNVYA G W S + R+
Sbjct: 585 KQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRR 627
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/515 (19%), Positives = 215/515 (41%), Gaps = 39/515 (7%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC +I L + N+L+ MY A +F ++ +K+ VSW TM + +
Sbjct: 112 GRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAH 171
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
++ + A+ Y + +PN +S +L+ + LG I R + +
Sbjct: 172 DE-DDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL 230
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-GKQVHAFCVKR----- 195
+ N +++M +CG L R Y + + + N+ WN +++G G H+ R
Sbjct: 231 VANAVINMLFRCGLLDRA----YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSL 286
Query: 196 ---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
G ++ T ++++ + + D + + ++ S + + + +A
Sbjct: 287 VCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANA---AA 343
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH- 311
+ S+ ++ ++ K+ + W ++IS ++ + N+E I L +
Sbjct: 344 FGSVQSSLKIIEDSGKM-------------ELVSWGAIISAFLKHGLNDEVIFLFNLFRG 390
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
S D + + L AC N R +H L++ +G+ + V S ++D YA+ G
Sbjct: 391 DSTNKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGE 448
Query: 372 VKSALELFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+ SA F + D + ++ ++ HGL A L+ +M + + ++L
Sbjct: 449 ITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAIL 508
Query: 430 KVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD- 487
CS L + +GK + + G L+D+ + G +D+ + MP +
Sbjct: 509 SACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPW 568
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
W ++ GC +G + + ++++ R+ P+
Sbjct: 569 PAVWRSLVNGCRIHGNKQLGVLAAEQIL--RMAPS 601
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 166/427 (38%), Gaps = 65/427 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR G + + G + ++G + ++ N +++M L+ A+ F + +NI
Sbjct: 201 LRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNI 260
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W ++ Y A+RL+ ++ G P+ F YSAVL A + IH
Sbjct: 261 VTWNEIIAGYGLFSHSEDAMRLFRSLVCIGE-RPDEFTYSAVLSAFQEAHGARDHEQIHA 319
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
I ++ + C ++ L A+A+G+V Q
Sbjct: 320 IILKQG--------------FASCQFVSTSLIKA----NAAAFGSV-----------QSS 350
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM-------PERDVVSWTGIIVGC 242
++ + E V+ ++I +LK G D+ + LFN P+ +++ ++ C
Sbjct: 351 LKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILA--TVLNAC 408
Query: 243 F------ECSCF--------------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
C C SA+VD Y+ C + A F S SA
Sbjct: 409 ANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVS----SATN 464
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+ ++N+M++ Y + EA+ L + + + TF + L AC + L + L
Sbjct: 465 DAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSH-LGLVEQGKLA 523
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKHG 401
++ G + L+DL AR G + A + +P + A W L+ GC HG
Sbjct: 524 FSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 583
Query: 402 LNSLAYL 408
L L
Sbjct: 584 NKQLGVL 590
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 254/477 (53%), Gaps = 29/477 (6%)
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF-ECSCFTLSALVDM------------ 256
MY KC E+D+ + +F +P +VSW +I G E SC ++ +
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 257 YSNCNVLC-------EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
YSN C AR +FD+ S +V WN+++SGY EQ+++ I L
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKISR------PSVTTWNTLLSGYCQEEQHQDTIELFRR 114
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + D T L +C L + F QVH V D V S L+D+Y++
Sbjct: 115 MQHQNVQPDRTTLAVILSSCSKLGILD--FGRQVHSASVRFLLHNDMFVASGLVDMYSKC 172
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A +F+++ ++DVV W+ +I G T H LN A+ F+ M + + +S++
Sbjct: 173 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 232
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
CS L+S+ G+Q+HA +K G+++ ++LIDMY KCG +DD F M +++V
Sbjct: 233 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 292
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+W +I G QNG +A+ F+ M+ + KP+ +TF+ VL+ C H+GLV++A F SM
Sbjct: 293 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 352
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ YG+ P EHY C++D LG+AG F + E LI +MP K D IW +L AC H+N +L
Sbjct: 353 ENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAEL 412
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
AE L P++PS YV+LSN+YA+LG S VR G K G SWI+
Sbjct: 413 GKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWID 469
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 173/428 (40%), Gaps = 95/428 (22%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY +++A K+F+ + IVSW ++T + A+ + + M E G EPN
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAG-FEPNEV 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK------CGSLTRKL 160
YS +L +C + D+ R + ++I+R + NTLL Y + L R++
Sbjct: 60 TYSNLLASCIKARDVHSARAMFDKISRPSV----TTWNTLLSGYCQEEQHQDTIELFRRM 115
Query: 161 FDQYSNWAASAYGNVALWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
Q+ N + +S +L G+QVH+ V+ + + L+DMY KCG
Sbjct: 116 --QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCG 173
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVG---------CFEC--------------------- 245
+I ++FN M ERDVV W II G F+
Sbjct: 174 QIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMIN 233
Query: 246 SCFTLSAL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASA 280
SC LS++ +DMY+ C + +AR FD
Sbjct: 234 SCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM------M 287
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LL 333
N+ WN MI GY N ++A+ L ++ ++ D+ TF + L C + +
Sbjct: 288 MKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMA 347
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
FNS +G+I + + + LID R G L H++P K D + W
Sbjct: 348 FFNS--MENSYGIIPLAEHY------TCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEV 399
Query: 393 LIMGCTKH 400
L+ C H
Sbjct: 400 LLAACVVH 407
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G+ +H +++ L D+F + L+ MY+ + A +F++M +++
Sbjct: 131 LSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDV 190
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W ++++ T + A + M E G + P Y++++ +CS + GR IH
Sbjct: 191 VCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSCSRLSSIPHGRQIHA 249
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
++ ++ + + + + L+DMY KCG++ R FD N+ WN M+ G Q
Sbjct: 250 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM------MMKNIVAWNEMIHGYAQ 303
Query: 188 ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + + + + VT +++ G +D +A FN M
Sbjct: 304 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 352
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ C + SI G+ +H +++K G Q+++ G+ L+ MYA +++DA FD M KNI
Sbjct: 232 INSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNI 291
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y N + A+ L+ +ML +P+ + AVL CS SG +D
Sbjct: 292 VAWNEMIHGYAQNGLGDKAVELFEYMLTTEQ-KPDAVTFIAVLTGCSHSGLVDKAMAFFN 350
Query: 130 RITREK-----LEYDTVLMNTL--LDMYVKCGSLTRKLF--DQYSNWAASAYGNVALWNS 180
+ E+ T L++ L +V+ +L K+ D W V N+
Sbjct: 351 SMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNA 410
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
L H F + K L ++Y G D A+ M R VV G
Sbjct: 411 ELGKCAAEHLFRID---PKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRG 464
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 237/421 (56%), Gaps = 8/421 (1%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L+AL++MYS+CN AR + D WA+ +V WN++I+GY+ +A+
Sbjct: 41 FVLNALINMYSSCNYPASARLVLDSAPRWAS----DVVSWNTIIAGYIRGGMPNKALQSF 96
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + +D T + L AC + H L+V +G+E++ +GS+L+ +YA
Sbjct: 97 HQMAKEQVRLDEVTLLNVLVACAR--TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYA 154
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G V+ A +F+R+P+++VV W+ +I GCT+ G A LFRDM + + I++
Sbjct: 155 KCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIAT 214
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ C + +L G+ +HA+C G KE SLIDMY KCG+++ +F + +RD
Sbjct: 215 VVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRD 274
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
V +WT +I+G NG EA+ F +M + ++ PNE+ FLGVL+AC H GLVE+ + F
Sbjct: 275 VFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHF 334
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M Y L P +EHY CMVDLLG+A +AEQ I +MP PD +W S+L AC
Sbjct: 335 HRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQ 394
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIE 665
L AE++ P+ +V+LSNVYAT W ++ VR G KK G S+IE
Sbjct: 395 VGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIE 454
Query: 666 V 666
V
Sbjct: 455 V 455
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 191/428 (44%), Gaps = 48/428 (11%)
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAA 169
+ A + LD+G H + L D+ ++N L++MY C + R + D WA+
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 170 SAYGNVALWNSMLSG-------GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
+V WN++++G K + +F K ++VTL +++ + G + G
Sbjct: 72 ----DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVG 127
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+++ FE +C+ S+LV MY+ C ++ EAR++F++
Sbjct: 128 SLCHAL-----------VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER---- 172
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
NV W SMI+G + + +EA+ L + +G+ D T + + +C + +
Sbjct: 173 --NVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRY 230
Query: 341 LQV----HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
L HGL G EL V ++LID+Y++ G+V A ++FH L K+DV W+ +IMG
Sbjct: 231 LHAYCDGHGL----GKELS--VKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMG 284
Query: 397 CTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFE 454
+GL A LF M ++ + N+ I VL CS + +G H
Sbjct: 285 FAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLV 344
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC---GQNGRAKEAIAY 510
++D+ + + + K MP DVV W ++ C GQ G A+ A
Sbjct: 345 PRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAER 404
Query: 511 FQEMIQSR 518
+++ R
Sbjct: 405 IEQLEPKR 412
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-- 66
A+ + S+ G H +K L+ D F N L++MY+ A + D R
Sbjct: 11 AISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWA 70
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++VSW T++ Y PN A++ + H + V + VL AC+ +G + +G L
Sbjct: 71 SDVVSWNTIIAGYIRGGMPNKALQSF-HQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H + E + + ++L+ MY KCG + R++F++ NV W SM++G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER------NVVCWTSMIAG 183
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ +HA+C G KE
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKE 243
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG+++ +F+ + +RDV +WT +I+G
Sbjct: 244 LSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMG 284
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C + ++K G H ++ G + + G++L+SMYA + +A ++
Sbjct: 106 LDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRV 165
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +N+V WT+M+ T + R A+ L+ M + V+ + + V+ +C G
Sbjct: 166 FNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDM-QIAGVKADDATIATVVSSCGQMGA 224
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LDLGR +H L + + N+L+DMY KCG + + Y + +V W
Sbjct: 225 LDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKA----YQIFHGLTKRDVFTWTV 280
Query: 181 MLSG 184
M+ G
Sbjct: 281 MIMG 284
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 5/211 (2%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE--RDVVSWT 492
+ SL G Q HA +K + L +LI+MY C + P DVVSW
Sbjct: 18 VPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWN 77
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II G + G +A+ F +M + +++ +E+T L VL AC G + + ++ ++
Sbjct: 78 TIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAM-KVGSLCHALVVL 136
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK-LVS 611
G E + +V + + G ++A ++ MP + + W SM+ C K V
Sbjct: 137 NGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP-ERNVVCWTSMIAGCTQSGRFKEAVD 195
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
+ + +A D + + + +G D
Sbjct: 196 LFRDMQIAGVKADDATIATVVSSCGQMGALD 226
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I + CGQ ++ G+ LH +GL +++ N+L+ MY+ +N A+++F
Sbjct: 208 DDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIF 267
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++++ +WT M+ + N A+ L+ M V PN ++ VL ACS G +
Sbjct: 268 HGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLV 327
Query: 122 DLGRLIHERITR 133
+ G R+++
Sbjct: 328 EQGYHHFHRMSK 339
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 303/611 (49%), Gaps = 87/611 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
YS+VL+ C+ G+ +H I + D L L+ Y CG L R++FD
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFE----------------KE 200
NV LWN M+S ++ F V++G E ++
Sbjct: 162 K------KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRD 215
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGCFECSCFTL------ 250
++ S+I Y+ G + GL ++ M + D+ + ++VGC +L
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 251 --------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ L+DMYS C L A ++F++ NV W SMI+GY
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER------NVVSWTSMIAGYTR 329
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ +++ AI LL + G+ +D TS L AC + ++ VH I + E +
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN--GKDVHDYIKANNMESNL 387
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V + L+D+YA+ G++++A +F + KD+++W+ +I G K ++A
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELKPDSRTMA---------- 436
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
VL C+ L++L RGK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 437 ----------CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 486
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF +P +D+VSWT +I G G +G EAIA F EM + ++P+E++F+ +L AC H+
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL+E+ W F MK ++ +EP LEHY CMVDLL + G A + I +P PD TIW +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLG 655
+L C +++ +L +AE++ PE+ YV+L+N+YA W+ + ++R K GK+
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 656 EKKAGMSWIEV 666
K G SWIE+
Sbjct: 667 RKNPGCSWIEI 677
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 186/436 (42%), Gaps = 106/436 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL I+ L C ++ GK++H IK + I N LL MY+ L+ A ++
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M +N+VSWT+M+ YT + R + AI+L M + G V+ + +++L AC+ SG
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEG-VKLDVVAITSILHACARSGS 367
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LD G+ +H+ I +E + + N L+DMY KCGS+ S ++ ++ WN+
Sbjct: 368 LDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEA----ANSVFSTMVVKDIISWNT 423
Query: 181 M-----------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
M L GK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 424 MIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
LF+ +P +D+VSWT +I G +
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAG----------------------------------YG 509
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
YGN EAI + + +G+ D +F S L AC
Sbjct: 510 MHGYGN------------------EAIATFNEMRDAGIEPDEVSFISILYAC-------- 543
Query: 338 RFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP-K 384
H ++ G+ YI+ ++ ++DL +R GN+ A E LP
Sbjct: 544 -----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA 598
Query: 385 KDVVAWSGLIMGCTKH 400
D W L+ GC +
Sbjct: 599 PDATIWGALLCGCRNY 614
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R + L C ++++GK +H I++ G S D N L+ +Y L A LF
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K++VSWT M+ Y + N AI +N M + G +EP+ + ++L ACS SG L
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLL 549
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWN 179
+ G R + +E ++D+ + G+L++ F + A A +W
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA----TIWG 605
Query: 180 SMLSGGKQVH 189
++L G + H
Sbjct: 606 ALLCGCRNYH 615
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 288/559 (51%), Gaps = 34/559 (6%)
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
DL + IH +I L ++T L N+L++ YV CG L D + + Y NV W
Sbjct: 36 DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA----DAKQIFHHTPYKNVVSWT 91
Query: 180 SMLSGGKQ----VHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
++SG + V A V R F+ VT++S++ + G I ++ F
Sbjct: 92 ILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF---- 147
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
W + G FE + F +ALVDMYS + AR+LF+ S NV WN++
Sbjct: 148 ----W---VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER------NVVTWNAI 194
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SGY + +EEAI L + + G+ +D YT S + A +++ + +HG I+ +
Sbjct: 195 VSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL--QVGTGIHGFIIRT 252
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GYE D + + L+D+Y V A +F + KDV AW+ ++ G + A F
Sbjct: 253 GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHF 312
Query: 411 RDMIN-SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
M+ N ++ + +L CS +L++G++VHA +K F +++IDMY
Sbjct: 313 NKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG ++D F M E+DVV W +I G G NG +AI F +M S L P+E TF+ V
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L AC HAG+V E IF M + P+L+HY C++D+LG+AG D A I MPF+P
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D +++++L AC H N KL I++++ P D YV+LSN+YA G W+ + R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 650 AGK-KLGEKKAGMSWIEVS 667
+ + K +K G S IE++
Sbjct: 553 SLRSKRMKKDPGFSSIEIN 571
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 199/492 (40%), Gaps = 125/492 (25%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+ +K + +H +II GL+ + F N+L++ Y L DA ++F KN+VSWT ++
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI 94
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N AI ++ M+ G+ +PN S+VL A + G + + + +H R
Sbjct: 95 SGLAKNDCFVEAIDVFREMI-MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 137 EYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
E + + L+DMY K C + R+LF+ S NV WN+++SG
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSER------NVVTWNAIVSGYSDHGFSEEA 207
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
G +H F ++ G+E + T+L+D+
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWT---------------------------------- 236
Y+ +DD +F+ M +DV +WT
Sbjct: 268 YVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIA 327
Query: 237 --GIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
GI+ C F + F SA++DMY+NC L +A++ F
Sbjct: 328 LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF---- 383
Query: 275 SWAASAYG----NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
YG +V WN+MI+G +N +AI L + SG+ D TF S L AC
Sbjct: 384 ------YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACS 437
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVA 389
+ + H ++ TS + + +ID+ R G + +A + +P + D
Sbjct: 438 HAGMVYEGLQIFYH-MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDV 496
Query: 390 WSGLIMGCTKHG 401
+S L+ C HG
Sbjct: 497 YSTLLGACRIHG 508
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L L+ +Q+HA + G SL++ Y+ CG + D +F P ++VVSWT +
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G +N EAI F+EMI KPN +T VL A + GL+ A ++ G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHC-FWVRGG 152
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
E ++ +VD+ + GC A QL M + + W +++ H
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYSDH 201
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++QG+ +H IK + +IF G+ ++ MYA+ +L DA + F M K++
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
V W M+ N AI L+ M G ++P+ + +VL ACS +G
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSG-LDPDESTFVSVLYACSHAG 440
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 204/721 (28%), Positives = 325/721 (45%), Gaps = 122/721 (16%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QG+ +H II L D+ GN L+ M A L+ A + F M R++++SWT MVT
Sbjct: 141 SLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVT 200
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY N A Y ML G V PN + AVL ACS + D +L ++ + + E
Sbjct: 201 AYARNGHIAEAFGYYLRMLLEGVV-PNNITFLAVLAACSSARDAEL---VYGNVVEAEWE 256
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----------- 184
DT++ N ++M+ KCG L R +F + W +V WN+M++
Sbjct: 257 SDTMVANASINMFSKCGCLDRARDVFHRMKRW------DVKSWNAMVAALAQHGFSSEAL 310
Query: 185 --------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
GK +H+ + G E + V T+L+ MY
Sbjct: 311 ELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYS 370
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGII--------------------------------- 239
+CG++ + +F+ + ++VVSW +I
Sbjct: 371 RCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTAL 430
Query: 240 --VGCFECSC------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
V EC F SALV+MY L +AR++F++
Sbjct: 431 NVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIE---- 486
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-INLLNFNSR 338
+V WN+++ V + Q EA+ S + G + TF AL A + + + R
Sbjct: 487 --RDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVCYGRR 544
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+HGLI SG E D V + LI +YAR +++ A F RL K +V+W+ +I C
Sbjct: 545 ----LHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACV 600
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
G A LF+ M + ++ ++VL+ C+ +++ R GK VH+ + G E
Sbjct: 601 DLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVF 657
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
T+LI M+ K G + + +F+ + + W ++ G Q G ++ I +F M Q
Sbjct: 658 VATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRG 717
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ P+ ITFL V+SAC HAGLVE+ F SM +YG+ LE Y C++DLL +AG ++A
Sbjct: 718 VAPDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEA 777
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+ MP P W ++L AC+ + + S A ++ P + +V LSN+ +
Sbjct: 778 YDFLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSNMSSIA 837
Query: 639 G 639
G
Sbjct: 838 G 838
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 163/660 (24%), Positives = 290/660 (43%), Gaps = 80/660 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + ++ + C +R+ + + S++ I G+ D F G +++ M+ S++DA ++F
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++M +++V WT+MVTA+ ++ + A + M G V P+ + ++L AC L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEG-VLPDRVTFISILNACE---SL 142
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
G L+H I + LE D V+ N L+ M KC L + F + +V W
Sbjct: 143 AQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPR------RDVISWT 196
Query: 180 SMLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
M++ G AF + G ++T +++ C D ++ + E
Sbjct: 197 GMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVL---AACSSARDAELVYGNVVEA 253
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ +E +A ++M+S C L AR +F + W +V WN+M
Sbjct: 254 E-----------WESDTMVANASINMFSKCGCLDRARDVFHRMKRW------DVKSWNAM 296
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
++ + + EA+ L + S + +D T AL C + +H +
Sbjct: 297 VAALAQHGFSSEALELFRRMPSE-VAVDKTTLVIALSTCAAPESLED--GKSIHSRVARL 353
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK-HGLNSLAYLL 409
G E D + G+ L+ +Y+R G++ A +F + K+VV+W+ +I + L+S A +
Sbjct: 354 GLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEI 413
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
FR M+ D + ++ L V S + GKQ+H + V G + ++L++MY +
Sbjct: 414 FRLML---LDGVRPTRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYER 470
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G + D +F+ + ERDV +W I+ C +G+ +EA+ +F M+ N TFL
Sbjct: 471 TGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLA 530
Query: 530 LSAC---------RHAGLVEEAW-----TIFTSMKPEYGLEPHLEHYYCMVDLLGQ---- 571
LSA R GL+ E+ + ++ Y LE D L
Sbjct: 531 LSAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIV 590
Query: 572 ------AGCFD-----DAEQLIAEMPFKPDKTIWASMLKAC---ETHNNTKLVSIIAEQL 617
A C D +A L M +PD+ + ++L+AC H KLV A +L
Sbjct: 591 SWTSVIAACVDLGSCQEAIDLFQRMELEPDRVTFTTVLEACTIVSAHREGKLVHSRAREL 650
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 198/500 (39%), Gaps = 116/500 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V AL C S++ GKS+H R+ + GL D+ G L++MY+ L +A ++
Sbjct: 322 VDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRV 381
Query: 61 FDEMARKNIVSWTTMVTAYTSNKR-PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD + KN+VSW M+ AY ++ + A+ ++ ML G V P + L S
Sbjct: 382 FDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDG-VRPT---RTTALNVVSAVE 437
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--- 169
+G+ +H I L D+ + + L++MY + GSL R++F++ W A
Sbjct: 438 CQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVG 497
Query: 170 ---------------------SAYGNVALWNSMLSG--------GKQVHAFCVKRGFEKE 200
A GN A + LS G+++H + G E +
Sbjct: 498 VCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVCYGRRLHGLIAESGLEAD 557
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC------------------ 242
+ +LI MY +C ++D F+ + ++ +VSWT +I C
Sbjct: 558 NNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL 617
Query: 243 ----------------------------------FECSCFTLSALVDMYSNCNVLCEARK 268
E + F +AL+ M+S L EAR+
Sbjct: 618 EPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARR 677
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F+ A +A WN+M+ GY ++ I + G+ D TF + + A
Sbjct: 678 IFE------AVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSA 731
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRL 382
C S L G + DY VG LIDL AR G ++ A + +
Sbjct: 732 C-------SHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGM 784
Query: 383 P-KKDVVAWSGLIMGCTKHG 401
P V W L+ C G
Sbjct: 785 PCGPSDVTWKTLLAACKIQG 804
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 195/674 (28%), Positives = 335/674 (49%), Gaps = 43/674 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V R C RR++ G R S + GN +LSM F + A ++F +M
Sbjct: 100 VALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPE 159
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++ SW MV Y A+ LY ML + + P+ + + VL+ C D +GR
Sbjct: 160 RDVFSWNVMVGGYGKVGFLEEALDLYYRML-WAGMRPDVYTFPCVLRTCGGIPDWRMGRE 218
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + R + ++N L+ MY KCG + RK+FD A + WN+M++G
Sbjct: 219 VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD------GMAVTDCISWNAMIAG 272
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G ++ ++ + +T+TS+ E+ + F +R
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKR----- 327
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G + C+ +L+ MY++ + +A K+F + + A + W +MISGY
Sbjct: 328 -GFAIDVAFCN-----SLIQMYTSLGRMGDAGKIFSRMETKDAMS------WTAMISGYE 375
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N ++A+ + + + + D T SAL AC L + +++H L G+
Sbjct: 376 KNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLD--VGIKLHELAQNKGFIRY 433
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG-CTKH-GLNSLAYLLFRDM 413
+V + L+++YA+ ++ A+E+F + +KDVV+WS +I G C H +L Y FR M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYY--FRYM 491
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + N + L C+ +LR GK++HA+ ++ G E +L+D+Y+KCG+
Sbjct: 492 LGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
A F E+DVVSW ++ G +G A++ F +M++ P+E+TF+ +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
AG+V + W +F M ++ + P+L+HY CMVDLL + G +A LI MP KPD +
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W ++L C H + +L + A+ +L P D + +V+L ++Y G W +++VRK ++
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 654 LG-EKKAGMSWIEV 666
G E+ G SW+EV
Sbjct: 731 KGLEQDNGCSWVEV 744
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 208/483 (43%), Gaps = 95/483 (19%)
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+LE P+ Y A+ + C +D G R E + L N +L M V+ G
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145
Query: 155 SLTR--KLF------DQYS-NWAASAYGNVA------------LWNSMLSG--------- 184
+ ++F D +S N YG V LW M
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G++VHA ++ GF E L +L+ MY KCG+I +F+ M D +S
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W +I G FE N CEA + L+ +M+
Sbjct: 266 WNAMIAGHFE----------------NHECEA----------------GLELFLTML--- 290
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+NE + + M I S T S + + + FA ++HG V G+ +
Sbjct: 291 ----ENE--------VQPNLMTITSVTVASGMLSEVG-------FAKEMHGFAVKRGFAI 331
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++LI +Y LG + A ++F R+ KD ++W+ +I G K+G A ++ M
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N + I+S L C+CL L G ++H +GF + + +L++MY K ID
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHID 451
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ +FKFM E+DVVSW+ +I G N R+ EA+ YF+ M+ +KPN +TF+ LSAC
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACA 510
Query: 535 HAG 537
G
Sbjct: 511 ATG 513
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 195/674 (28%), Positives = 335/674 (49%), Gaps = 43/674 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V R C RR++ G R S + GN +LSM F + A ++F +M
Sbjct: 100 VALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPE 159
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++ SW MV Y A+ LY ML + + P+ + + VL+ C D +GR
Sbjct: 160 RDVFSWNVMVGGYGKVGFLEEALDLYYRML-WAGMRPDVYTFPCVLRTCGGIPDWRMGRE 218
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + R + ++N L+ MY KCG + RK+FD A + WN+M++G
Sbjct: 219 VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD------GMAVTDCISWNAMIAG 272
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G ++ ++ + +T+TS+ E+ + F +R
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKR----- 327
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G + C+ +L+ MY++ + +A K+F + + A + W +MISGY
Sbjct: 328 -GFAIDVAFCN-----SLIQMYTSLGRMGDAGKIFSRMETKDAMS------WTAMISGYE 375
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N ++A+ + + + + D T SAL AC L + +++H L G+
Sbjct: 376 KNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLD--VGIKLHELAQNKGFIRY 433
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG-CTKH-GLNSLAYLLFRDM 413
+V + L+++YA+ ++ A+E+F + +KDVV+WS +I G C H +L Y FR M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYY--FRYM 491
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + N + L C+ +LR GK++HA+ ++ G E +L+D+Y+KCG+
Sbjct: 492 LGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
A F E+DVVSW ++ G +G A++ F +M++ P+E+TF+ +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
AG+V + W +F M ++ + P+L+HY CMVDLL + G +A LI MP KPD +
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W ++L C H + +L + A+ +L P D + +V+L ++Y G W +++VRK ++
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 654 LG-EKKAGMSWIEV 666
G E+ G SW+EV
Sbjct: 731 KGLEQDNGCSWVEV 744
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 208/483 (43%), Gaps = 95/483 (19%)
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+LE P+ Y A+ + C +D G R E + L N +L M V+ G
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145
Query: 155 SLTR--KLF------DQYS-NWAASAYGNVA------------LWNSMLSG--------- 184
+ ++F D +S N YG V LW M
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G++VHA ++ GF E L +L+ MY KCG+I +F+ M D +S
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W +I G FE N CEA + L+ +M+
Sbjct: 266 WNAMIAGHFE----------------NHECEA----------------GLELFLTML--- 290
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+NE + + M I S T S + + + FA ++HG V G+ +
Sbjct: 291 ----ENE--------VQPNLMTITSVTVASGMLSEVG-------FAKEMHGFAVKRGFAI 331
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++LI +Y LG + A ++F R+ KD ++W+ +I G K+G A ++ M
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N + I+S L C+CL L G ++H +GF + + +L++MY K ID
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHID 451
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ +FKFM E+DVVSW+ +I G N R+ EA+ YF+ M+ +KPN +TF+ LSAC
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACA 510
Query: 535 HAG 537
G
Sbjct: 511 ATG 513
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 306/629 (48%), Gaps = 110/629 (17%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AI + + L+ G + + FMY VLK C DL + +H+ I + ++E + +MN LL
Sbjct: 12 AIVVLMNRLQRGLI-TDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 148 DMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------------- 184
+Y++CG L R +FD + ++ WN+M++G
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGAS------WNAMIAGYVEHKHAEDAMRLFREMCHEG 124
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDG 220
GK+VHA C++ G + DV + T+L+ MY KCG I++
Sbjct: 125 VQPNAGTYMIILKACASLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEA 183
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+F+ + D++SWT +I ++A S
Sbjct: 184 RRIFDNLMNHDIISWTVMI----------------------------------GAYAQSG 209
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
G +EA L+ + G ++ T+ S L AC + ++
Sbjct: 210 NG------------------KEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL--KWV 249
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
+VH + +G ELD VG+ L+ +YA+ G++ A +F R+ +DVV+W+ +I +H
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEH 309
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G AY LF M + + S+L C+ +L K++H + G E +
Sbjct: 310 GRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVG 369
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
T+L+ MY K G IDD +F M R+VVSW +I G Q+G ++A+ F+ M +K
Sbjct: 370 TALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+ +TF+ VLSAC HAGLV+E + + +M YG+EP + H CMVDLLG+AG +A+
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
I M PD+ W ++L +C T+ N +L ++A++ L P++ + YV+LSN+YA G
Sbjct: 490 FIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGK 549
Query: 641 WDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
WD +S VR ++ G K+ G SWIEV +
Sbjct: 550 WDMVSWVRTMMRERGIRKEPGRSWIEVDN 578
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 203/505 (40%), Gaps = 106/505 (20%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
VE L+ C +++ + K +H IIK + Q+ NNLL +Y + L +A +FD + +
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVK 91
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ SW M+ Y +K A+RL+ M G V+PN Y +LKAC+ L G+
Sbjct: 92 KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEG-VQPNAGTYMIILKACASLSALKWGKE 150
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY 172
+H I LE D + LL MY KCGS+ R++FD N +A S
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGN 210
Query: 173 GN---------------------VALWNSMLSGG-----KQVHAFCVKRGFEKEDVTLTS 206
G V++ N+ S G K+VH + G E + T+
Sbjct: 211 GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTA 270
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------------C-- 245
L+ MY K G IDD +F+ M RDVVSW +++G F C
Sbjct: 271 LVQMYAKSGSIDDARVVFDRMKVRDVVSWN-VMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329
Query: 246 ----------SCFTLSAL-------------------------VDMYSNCNVLCEARKLF 270
+C + AL V MYS + +AR +F
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVF 389
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ NV WN+MISG + ++A+ + + + G+ D TF + L AC
Sbjct: 390 DRMK------VRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVA 389
+ Q + G E D + ++DL R G + A + D
Sbjct: 444 H-AGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEAT 502
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMI 414
W L+ C +G L L+ ++ +
Sbjct: 503 WGALLGSCRTYGNVELGELVAKERL 527
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 8/305 (2%)
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EAI +L + G+ DS+ + LK C+ + + A QVH I+ S E + V +N
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMA--AKQVHDCIIKSRMEQNAHVMNN 68
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ +Y G ++ A +F L KK +W+ +I G +H A LFR+M + N
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALF 480
+LK C+ L++L+ GK+VHA C++ G + D+ + T+L+ MY KCG I++ +F
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ D++SWT +I Q+G KEA +M Q KPN IT++ +L+AC G ++
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247
Query: 541 EAWTIFTSMKP-EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
W + GLE + +V + ++G DDA + M + D W M+
Sbjct: 248 --WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIG 304
Query: 600 ACETH 604
A H
Sbjct: 305 AFAEH 309
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 206/696 (29%), Positives = 320/696 (45%), Gaps = 99/696 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSL-----NDAHKLFDEM 64
L C R + Q +H + + GL D F + L+ ++ T L + + +L +
Sbjct: 11 LARCSSARHLLQ---IHAQFVASGLLADAFAASRLI-LFTTSTRLLPLPFHHSLRLLHVV 66
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
R N S ++ A + P+ + LY M S P+ + ++ + AC+ ++ G
Sbjct: 67 HRPNAFSCNMVLKAAREHGLPHLCLPLYASM----SAAPDCYTHTILAAACATRRAIEEG 122
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R +H R + L N L+ MY CG L RK+FD W A + WN++L
Sbjct: 123 RQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVS------WNTIL 176
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
+ Y++ ++D + +F MPER + + ++
Sbjct: 177 AA--------------------------YVQAEDVDQAVGVFARMPERGAAAVSSMV--- 207
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
S F +VD EARK+FD +V W +MIS + N + E
Sbjct: 208 ---SLFGRRGMVD---------EARKVFDGVER------KDVFTWTAMISCFQRNGKFAE 249
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINL---------------LNFNSRFALQ---VH 344
A+ L S + G +D + AC L SR +Q +H
Sbjct: 250 ALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIH 309
Query: 345 -----------GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ SG LD +++I Y + G+VK A ELF +P KD V+W+ +
Sbjct: 310 MYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTM 369
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I GC ++ +S A +F +M ++ + SV+ C+ ++SL +GK +H + + +
Sbjct: 370 ISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQY 429
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
I TSLIDMY+KCG ++ L +F M ER W +IVG NG +++ F E
Sbjct: 430 TITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSE 489
Query: 514 M-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M S PNEITF GVLSACRHAGLVEE F M+ +Y + P++ HY CMVDLLG+A
Sbjct: 490 MESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRA 549
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G +AE LI MP PD W ++L +C H + ++ + +L+ P + MLS
Sbjct: 550 GYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLS 609
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
N+YA+ GMW + +R + K+ K G S +E S
Sbjct: 610 NIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVESS 645
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C S++QGKS+H I ++ + + G +L+ MY L A ++FD M
Sbjct: 401 LVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTME 460
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W ++ N ++ +++ M + PN ++ VL AC +G ++ G+
Sbjct: 461 ERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQ 520
>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
Length = 841
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 315/645 (48%), Gaps = 49/645 (7%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH ++ GL + F G++LL MYA + A + F + K++ W M+ Y SN
Sbjct: 114 SLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNG 173
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+ AI ++ + + P+ + Y + +KACS+S LGR +H + LE +T +M
Sbjct: 174 FGHHAISTV-LVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVM 232
Query: 144 NTLLDMYVKC------GSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF 191
N+L+DMY + S+ RK+ + + WN+M SG K V +
Sbjct: 233 NSLVDMYFRARQKETAASVFRKIRQK----------DTVSWNTMFSGFAHDEDDKAVFGY 282
Query: 192 CV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ + GF+ +VT + L+ + GL +F + +
Sbjct: 283 LIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG-----------YTDNVL 331
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+A+++M C +L A Y + + + N+ WN +I+GY L +E+A+ L
Sbjct: 332 VANAVINMLFRCGLLDRA------YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFR 385
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL-YA 367
+ G D +T+++ L A +R Q+H +I+ G+ V ++LI A
Sbjct: 386 SLVCIGERPDEFTYSAVLSAFQEA--HGARDHEQIHAIILKQGFASCQFVSTSLIKANAA 443
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIIS 426
G+V+S+L++ K ++V+W +I KHGLN LF +S ++FI++
Sbjct: 444 AFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILA 503
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE- 485
+VL C+ A +R + +H+ +K G ++++D Y KCGEI + F +
Sbjct: 504 TVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSA 563
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D + + ++ +G EA+ ++EM +++L P TF+ +LSAC H GLVE+
Sbjct: 564 TNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKL 623
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F++M YG+ P +Y C+VDLL + G D+A+ +I MPF+P +W S++ C H
Sbjct: 624 AFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIH 683
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
N +L + AEQ+L +P YV LSNVYA G W S + R+
Sbjct: 684 GNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRR 728
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 160/347 (46%), Gaps = 16/347 (4%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L Y+ +L A K+FD+ + N+ W +M+S N
Sbjct: 23 FNMNYLPIYYARRGLLDSALKVFDEMP------HRNLVSWTAMVSASTRNGAPHLGFRFF 76
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLID 364
+ SG C + ++ + L AC +++ +S AL +HG+ V +G + + VGS+L+
Sbjct: 77 VSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLL 136
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ G + +A F + KD+ W+ ++ G +G A M +S +++
Sbjct: 137 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 196
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S +K CS A G+Q+H + E + SL+DMY + + + ++F+ +
Sbjct: 197 YISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 256
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-- 542
++D VSW + G + K Y +M ++ KPNE+TF +L R +G E A
Sbjct: 257 QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLL---RLSGAKENASL 313
Query: 543 -WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
IF ++ +G ++ ++++L + G D A + F+
Sbjct: 314 GLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 359
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/530 (19%), Positives = 220/530 (41%), Gaps = 39/530 (7%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ A++ C G+ LHC +I L + N+L+ MY A +F ++ +
Sbjct: 198 ISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQ 257
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW TM + + ++ + A+ Y + +PN +S +L+ + LG
Sbjct: 258 KDTVSWNTMFSGFAHDE-DDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQ 316
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-G 185
I R + ++ N +++M +CG L R Y + + + N+ WN +++G G
Sbjct: 317 IFALAYRHGYTDNVLVANAVINMLFRCGLLDRA----YGFFCSLTFRNIVTWNEIIAGYG 372
Query: 186 KQVHAFCVKR--------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
H+ R G ++ T ++++ + + D + + ++ S
Sbjct: 373 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 432
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ + + +A + S+ ++ ++ K+ + W ++IS ++ +
Sbjct: 433 VSTSLIKANA---AAFGSVQSSLKIIEDSGKM-------------ELVSWGAIISAFLKH 476
Query: 298 EQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N+E I L + S D + + L AC N R +H L++ +G+ +
Sbjct: 477 GLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHF 534
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V S ++D YA+ G + SA F + D + ++ ++ HGL A L+ +M
Sbjct: 535 CVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMT 594
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEI 473
+ + ++L CS L + +GK + + G L+D+ + G +
Sbjct: 595 KAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLL 654
Query: 474 DDGLALFKFMPERD-VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
D+ + MP + W ++ GC +G + + ++++ R+ P+
Sbjct: 655 DEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQIL--RMAPS 702
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y + G +D L +F MP R++VSWT ++ +NG +F MI+S PNE +
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 527 LGVLSACRHAGLVEEAWTIFTSMK-----PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+L+AC H+ + + + ++ GL+ + ++ + + G A++
Sbjct: 92 ATMLTAC-HSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRA 150
Query: 582 IAEMPFKPDKTIWASMLKACET----HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A + K D T W +ML+ + H+ V ++ LA P +Y +S V A
Sbjct: 151 FAHIRNK-DLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLA-----PDRYTYISAVKA 203
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 214/764 (28%), Positives = 345/764 (45%), Gaps = 124/764 (16%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
+AL C +S G +H IIK G S D+F NNL+ YA L +FD M +
Sbjct: 58 KALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLER 117
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC--SLSGDLDLGR 125
N+VSWT MV + + ++ M+ G V PN F +V+KAC S+ G + G
Sbjct: 118 NVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFV-PNEFGLGSVMKACGNSVEGRV-FGL 175
Query: 126 LIH-------------------------------ERITREKLEYDTVLMNTLLDMYVKCG 154
+H ER+ E D N ++ Y +CG
Sbjct: 176 CVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCG 235
Query: 155 ---------SLTRK---LFDQYSNWAASAYGNVALWNSMLSG---GKQVHAFCVKRGFEK 199
SL R+ D+Y+ + NV S+L G+Q+H ++ E
Sbjct: 236 YGFEAIVTASLMRRKGIFMDKYT------FINVIQGCSLLGDFNFGRQIHGLIIRSELEL 289
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF---------------- 243
+ +L+DMY K G + GL +F M +RDVV+W + G F
Sbjct: 290 SAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWN-TVFGSFSQHEDPKDIASLFHSF 348
Query: 244 -----------------ECS------------CFTL-----------SALVDMYSNCNVL 263
EC C L SAL++M+S C +
Sbjct: 349 LLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKM 408
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A +F S N+ +WN +ISGY LN + EA+ + G+ + YTF+
Sbjct: 409 EMAHLVFKSKVS------ENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFS 462
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L+ C + N Q+HG+ SG+ V S+LI Y + G + +L++F+ L
Sbjct: 463 NVLETCSR--SENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLD 520
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+ D+ AW +I G + A +I + + ++FI+ S+L C+ + + K
Sbjct: 521 RPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKS 580
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG-LALFKFMPERDVVSWTGIIVGCGQNG 502
VH+ +K GFE ++++D Y KCG+I +A + DVV + +I+ +G
Sbjct: 581 VHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHG 640
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
R EA+ + +M + L+P++ TF+ V++AC H G VE+ +F SM YG+EP + Y
Sbjct: 641 RVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGHVEKGCRLFKSMDL-YGMEPSPDIY 699
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C+VD+ + G +DA+Q+I +P+ I S+L C + N +L A++LL P
Sbjct: 700 GCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSLLSGCRMYGNRELGEWAAKKLLQLVP 759
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+ + + +L VY+ LG W+ +K+R+ + G +K G SWIE
Sbjct: 760 HNDAAHALLFKVYSELGNWEDAAKMRREMAERGLRKDPGHSWIE 803
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 206/540 (38%), Gaps = 107/540 (19%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + ++ C G+ +H II+ L N L+ MY + +
Sbjct: 254 MDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVV 313
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F +M +++V+W T+ +++ ++ P L+ H S+ PN +S + + C +
Sbjct: 314 FKKMHDRDVVTWNTVFGSFSQHEDPKDIASLF-HSFLLTSMRPNHITFSILFRECGKLLN 372
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LDLG L + + + L++M+ +CG K+ + + + N+ +WN
Sbjct: 373 LDLGLQFCCLALHFGLFDEANITSALINMFSRCG----KMEMAHLVFKSKVSENIIIWNE 428
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
++SG +Q+H K G
Sbjct: 429 LISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSG 488
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F +SLI Y+KCG +DD L +FN + D+ +W +I SA V
Sbjct: 489 FASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMI-----------SAFVHQ 537
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+C EAI L+ + +G
Sbjct: 538 GWDC-----------------------------------------EAIRSLNLLIEAGEK 556
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D + S L +C + + + VH LI+ G+E V S ++D YA+ G+++SA
Sbjct: 557 PDEFILGSILSSCASTVAYCQ--TKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAK 614
Query: 377 ELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
F++ K DVV ++ +I+ HG A + M +N +Q SV+ C +
Sbjct: 615 MAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHI 674
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+ +G ++ G E L+DM+ + G ++D + + +P +W I+
Sbjct: 675 GHVEKGCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLP---YPAWPAIL 731
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+S L C S G Q+H + +K GF + +LI Y K + G +F M
Sbjct: 56 LSKALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGML 115
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
ER+VVSWT ++ G Q + + F EMI+ PNE V+ AC
Sbjct: 116 ERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKAC 164
>gi|297721495|ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group]
gi|50251347|dbj|BAD28323.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671158|dbj|BAH91839.1| Os02g0670700 [Oryza sativa Japonica Group]
Length = 687
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 202/688 (29%), Positives = 342/688 (49%), Gaps = 55/688 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + I L+ C + ++ GK +H +K+GLS D F G++L+ +Y+ ++D+ +
Sbjct: 27 LDGKTITFVLKSCTELENLYLGKGMHVDSLKFGLSGDKFIGSSLIVLYSKLHRMDDSQGV 86
Query: 61 FDEMARKNIVSWTTMVTAYTS-NKRPNW-AIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
F E+ K++V++T+M+T Y+ W A + ML+ G++E N ++L+
Sbjct: 87 FKEIIDKDVVAYTSMITGYSEIVDSVAWNAFDIAIDMLQ-GNLEVNRVTMISLLQIAGNL 145
Query: 119 GDLDLGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAAS---AYGN 174
G L G+ +H I R + D +L ++++Y +CG+ Y + A+ + G
Sbjct: 146 GALKEGKSLHCYSIRRALVVSDYILETCIVNLYTRCGA--------YQSAVATLQNSKGT 197
Query: 175 VALWNSMLSGGKQ-------VHAFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
A WN+MLSG + +H V + + VT ++I ++ ++
Sbjct: 198 AASWNAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTFANVISACVEVCYFGYAASIH 257
Query: 225 NFMPER----DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
++ R DVV T ALV +YS C + +R LF+Q A +
Sbjct: 258 TYLIRRYIPLDVVLAT---------------ALVKVYSKCKKITISRHLFNQLIVKDAVS 302
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRF 339
Y N+M+ GY+ N EA +LL+++ + G+ D T S L A + + R+
Sbjct: 303 Y------NAMMYGYLHNGMANEATSLLNYMMAEGIVPDFATVLSLLAAFADQRDLVRGRW 356
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+HG + G+ D V ++++ +Y+ G +A +F L +K +V+W+ ++ GC
Sbjct: 357 ---IHGFGIRHGFCSDGDVENHILYMYSVCGKPAAARVIFDLLEQKSLVSWTAMMKGCLP 413
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+G LF M + + + + ++ S L L KQ+H F + EK+ IT
Sbjct: 414 YGHGDEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQIHCFVYRSLLEKDKIT 473
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
SLI Y KCG +D + LF + R++ +W II +G + F++M + +
Sbjct: 474 ANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFYINMLEMFKQMEEENI 533
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+E+TF VL+AC HAGLV++ W +F SM Y + P EHY CMVDLLG+AG +D
Sbjct: 534 QPDELTFSTVLTACSHAGLVKDGWRMFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGY 593
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ I K TI+ ++ AC TH NT+L I+++LL P+ P Y ++S VYA G
Sbjct: 594 KFIKLSTLKDKSTIFCVLISACRTHRNTQLALAISKELLEHGPQKPGIYALISEVYAQEG 653
Query: 640 MWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
W+ + R G KK G S+IE+
Sbjct: 654 QWNEFTNTRARANLSGLKKHPGSSFIEL 681
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 252/469 (53%), Gaps = 21/469 (4%)
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ V+LT L+ + ++ G D G + + + G F ++L MY+
Sbjct: 63 DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDG------AGGLFVSNSLASMYAK 116
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCID 318
+L +A ++FD NV W ++++ + + +EA+ L + G+ +
Sbjct: 117 FGLLDDALRMFD------GMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPN 170
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+YTF+S L AC + VH V +G + D V S+LID Y +LG++ +
Sbjct: 171 AYTFSSVLGACTTPGMLTA-----VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRV 225
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F + +D+V W+ +I G + G A LF M ++ NQ ++SVL+ C+ + L
Sbjct: 226 FDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVML 285
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
G+QVHA +K ++++ I +L+DMY KCG ++D ALF MP+RDV+SW+ ++ G
Sbjct: 286 EAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGL 343
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
QNG++ EA+ F M + PN +T +GVL AC HAGLVE+ W F SMK +G++P
Sbjct: 344 AQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPE 403
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
EH+ CMVDLLG+AG D+A + I M +PD IW ++L AC H N L + A ++L
Sbjct: 404 REHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREIL 463
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
P+D V+LSN YA L W K KA + G K+ G SWIE+
Sbjct: 464 KLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIEL 512
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 193/462 (41%), Gaps = 122/462 (26%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG-LSQD----IFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
C + + G+ +H + +G L D +F N+L SMYA F L+DA ++FD M +
Sbjct: 74 CVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDGMPVR 133
Query: 68 NIVSWTTMVTAYTS-NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
N+V+WTT+V A S + R A+R M G V PN + +S+VL AC+ G L
Sbjct: 134 NVVTWTTVVAALASADGRKQEALRFLVAMRRDG-VAPNAYTFSSVLGACTTPGMLT---A 189
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG 184
+H + L+ D + ++L+D YVK G L R++FD+ ++ +WNS+++G
Sbjct: 190 VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTR------DLVVWNSIIAG 243
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+QVHA +K ++++
Sbjct: 244 FAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRD 301
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ +L+DMY KCG ++D ALF+ MP+RDV+SW+ ++ G +
Sbjct: 302 LILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQ---------------- 345
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
N ++ EA+ + + S G+ +
Sbjct: 346 ------------------------------------NGKSVEALRVFDLMKSQGVAPNHV 369
Query: 321 TFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T L AC L+ + + L G + + + ++DL R G + A+E
Sbjct: 370 TMVGVLFACSHAGLVEDGWHYFRSMKRLF---GIQPEREHHNCMVDLLGRAGKLDEAVEF 426
Query: 379 FHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
H + + D V W L+ C H SLA R+++ D
Sbjct: 427 IHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPD 468
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 206/696 (29%), Positives = 320/696 (45%), Gaps = 99/696 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSL-----NDAHKLFDEM 64
L C R + Q +H + + GL D F + L+ ++ T L + + +L +
Sbjct: 11 LARCSSARHLLQ---IHAQFVASGLLADAFAASRLI-LFTTSTRLLPLPFHHSLRLLHVV 66
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
R N S ++ A + P+ + LY M S P+ + ++ + AC+ ++ G
Sbjct: 67 HRPNAFSCNMVLKAAREHGLPHLCLPLYASM----SAAPDCYTHTILAAACATRRAIEEG 122
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R +H R + L N L+ MY CG L RK+FD W A + WN++L
Sbjct: 123 RQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVS------WNTIL 176
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
+ Y++ ++D + +F MPER + + ++
Sbjct: 177 AA--------------------------YVQAEDVDQAVGVFARMPERGAAAVSSMV--- 207
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
S F +VD EARK+FD +V W +MIS + N + E
Sbjct: 208 ---SLFGRRGMVD---------EARKVFDVVER------KDVFTWTAMISCFQRNGKFAE 249
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINL---------------LNFNSRFALQ---VH 344
A+ L S + G +D + AC L SR +Q +H
Sbjct: 250 ALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIH 309
Query: 345 -----------GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ SG LD +++I Y + G+VK A ELF +P KD V+W+ +
Sbjct: 310 MYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTM 369
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I GC ++ +S A +F +M ++ + SV+ C+ ++SL +GK +H + + +
Sbjct: 370 ISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQY 429
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
I TSLIDMY+KCG ++ L +F M ER W +IVG NG +++ F E
Sbjct: 430 TITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSE 489
Query: 514 M-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M S PNEITF GVLSACRHAGLVEE F M+ +Y + P++ HY CMVDLLG+A
Sbjct: 490 MESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRA 549
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G +AE LI MP PD W ++L +C H + ++ + +L+ P + MLS
Sbjct: 550 GYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLS 609
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
N+YA+ GMW + +R + K+ K G S +E S
Sbjct: 610 NIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVESS 645
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C S++QGKS+H I ++ + + G +L+ MY L A ++FD M
Sbjct: 401 LVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTME 460
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W ++ N ++ +++ M + PN ++ VL AC +G ++ G+
Sbjct: 461 ERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQ 520
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 318/664 (47%), Gaps = 107/664 (16%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT-S 81
++LH K G Q + + N LL++Y ++L+ AHKLFDE+ KN +WT +++ + +
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
L+ M G+ PN + S+VLK CS ++ G+ IH I R + D V
Sbjct: 112 AGSSELVFSLFREMQADGAC-PNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVV 170
Query: 142 LMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
L N++LD+Y+KC K F+ +A S + + EK+
Sbjct: 171 LENSILDLYLKC-----KEFE----YAESFF---------------------ELMIEKDV 200
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
V+ +I YL+ G+++ L +F P +DVVSW II G +C
Sbjct: 201 VSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQC---------------- 244
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
Y +AL E+ +++H G T
Sbjct: 245 ------------------GYERLAL--------------EQLYCMVAH----GTEFSPVT 268
Query: 322 FTSA--LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
F+ A L + ++L+ Q+HG ++T G D + S+L+++Y + G + A +
Sbjct: 269 FSIALILVSSLSLVEVGR----QLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTIL 324
Query: 380 H----------------RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+ PK +V+WS ++ G +G FR M+ V+
Sbjct: 325 KDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+++++ C+ L GKQ+HA+ K G + +SLIDMY K G +DD L +F+ +
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
E +VV WT +I GC +G+ KEAI+ F+ M+ + PNE+TF+GVL+AC H GL+EE
Sbjct: 445 KEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGC 504
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F MK Y + P +EHY MV+L G+AG +A+ I E ++W S L +C
Sbjct: 505 RYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRL 564
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMS 662
H N + ++E LL ++P DP Y++LSN+ ++ WD + VR + G +K+ G S
Sbjct: 565 HKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQS 624
Query: 663 WIEV 666
W+++
Sbjct: 625 WVQL 628
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 36/239 (15%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-------------- 64
++ G+ LH R++ +GL+ D + ++L+ MY ++ A + ++
Sbjct: 282 VEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTC 341
Query: 65 --ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML-EYGSVEPNGFMYSAVLKACSLSGDL 121
+ +VSW++MV+ Y N + ++ + M+ E V+ + ++ AC+ +G L
Sbjct: 342 KEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR--TVATIISACANAGIL 399
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWN 179
+ G+ IH I + L D + ++L+DMY K GSL L F+Q NV LW
Sbjct: 400 EFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE------PNVVLWT 453
Query: 180 SMLSG------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
SM+SG GK+ + + G +VT +++ G I++G F M +
Sbjct: 454 SMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKD 512
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D+R + + C ++ GK +H I K GL D + G++L+ MY+ SL+DA +
Sbjct: 381 VDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMI 440
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+++ N+V WT+M++ + + AI L+ ML G + PN + VL ACS G
Sbjct: 441 FEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGII-PNEVTFVGVLNACSHVG- 498
Query: 121 LDLGRLIHERITREKLEYDTVLMN-------TLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
LI E ++ DT +N +++++Y + G L + N S
Sbjct: 499 -----LIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFEN---SISH 550
Query: 174 NVALWNSMLS 183
++W S LS
Sbjct: 551 FTSVWRSFLS 560
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 243/419 (57%), Gaps = 8/419 (1%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ L+++Y+ C L ARKLFD+ SS +V W ++I+GY +++ ++A+ LL +
Sbjct: 54 NTLLNLYAKCGDLVYARKLFDEMSS------RDVVTWTALITGYSQHDRPQDALLLLPEM 107
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ + +T S LKA + + + Q+HGL + GY+ + V ++D+YAR
Sbjct: 108 LRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCH 167
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+++ A +F + K+ V+W+ LI G + G A+ LF +M+ N F SSVL
Sbjct: 168 HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLC 227
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C+ + SL +GK VHA +K G + +L+DMY K G I+D +F + +RDVVS
Sbjct: 228 ACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVS 287
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W ++ G Q+G K A+ F+EM+++R+ PN+ITFL VL+AC HAGL++E F MK
Sbjct: 288 WNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK 347
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+Y +EP + HY MVDLLG+AG D A Q I+EMP KP +W ++L AC H N +L
Sbjct: 348 -KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELG 406
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
AE + P +V+L N+YA G W+ +KVRK K+ G KK SW+E+ +
Sbjct: 407 GYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMEN 465
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 10/304 (3%)
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LK C +L N +H L++ S + D ++ + L++LYA+ G++ A +LF + +
Sbjct: 22 LKRCTHLNKLNE--GKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS--LRRGKQ 443
DVV W+ LI G ++H A LL +M+ NQF ++S+LK S + S + +G+Q
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H C++ G++ +++DMY +C +++ +F M ++ VSW +I G + G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHY 562
+A F M++ +KP T+ VL AC G +E+ W +K L + +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN- 258
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT-- 620
++D+ ++G +DA+++ + K D W SML H K+ E++L T
Sbjct: 259 -TLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316
Query: 621 SPED 624
+P D
Sbjct: 317 APND 320
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 43/274 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +GK +H ++ D+ N LL++YA L A KLFDEM+ +++
Sbjct: 22 LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--GRLI 127
V+WT ++T Y+ + RP A+ L ML G ++PN F +++LKA S G D+ GR +
Sbjct: 82 VTWTALITGYSQHDRPQDALLLLPEMLRIG-LKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASAYG 173
H R + + + +LDMY +C L + +FD + +A G
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 174 NVA--LWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSL 207
+ A L+++M L GK VHA +K G + +L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+DMY K G I+D +F+ + +RDVVSW ++ G
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTG 294
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S++QGK +H +IK+G F GN LL MYA S+ DA K+FD +A++++VSW
Sbjct: 229 CASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSW 288
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M+T Y+ + A++ + ML + PN + VL ACS +G LD GR + +
Sbjct: 289 NSMLTGYSQHGLGKVALQRFEEMLR-TRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK 347
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
+ +E T++D+ + G L R + Q+ + A+W ++L G ++H
Sbjct: 348 KYNVEPQISHYVTMVDLLGRAGHLDRAI--QFIS-EMPIKPTAAVWGALL-GACRMHKNM 403
Query: 193 VKRGFEKEDV---------TLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G+ E + T L ++Y G +D + M E V
Sbjct: 404 ELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGV 452
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 151/398 (37%), Gaps = 126/398 (31%)
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWA 168
+LK C+ L+ G++IH + + D V+ NTLL++Y KCG L RKLFD+ S+
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS-- 78
Query: 169 ASAYGNVALWNSMLSG-------------------------------------------- 184
+V W ++++G
Sbjct: 79 ----RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDV 134
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+Q+H C++ G++ +++DMY +C +++ +F+ M ++ VSW +I G
Sbjct: 135 LQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGY 194
Query: 243 FE------------------------------CSC------------------------- 247
C+C
Sbjct: 195 ARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVA 254
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F + L+DMY+ + +A+K+FD+ A +V WNSM++GY + + A+
Sbjct: 255 FVGNTLLDMYAKSGSIEDAKKVFDRL------AKRDVVSWNSMLTGYSQHGLGKVALQRF 308
Query: 308 SHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGS--NLI 363
+ + + + TF L AC LL+ H + Y ++ + ++
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGR------HYFDMMKKYNVEPQISHYVTMV 362
Query: 364 DLYARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKH 400
DL R G++ A++ +P K A W L+ C H
Sbjct: 363 DLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
L R +N + I ++LK C+ L L GK +HA + F + + +L+++Y
Sbjct: 3 LIRQQCKNNAGARE-ICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG++ LF M RDVV+WT +I G Q+ R ++A+ EM++ LKPN+ T
Sbjct: 62 KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121
Query: 529 VLSACRHAG 537
+L A G
Sbjct: 122 LLKAASGVG 130
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 208/747 (27%), Positives = 345/747 (46%), Gaps = 110/747 (14%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G +H I+K GL D+F G +L+ +Y ++ DA K+F EM KN+VSWT ++ AY
Sbjct: 48 EGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYV 107
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
P+ + +Y M G + M S + SL +L LG + + + LE +
Sbjct: 108 DYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENEL-LGYQVLGHVIKYGLETNV 166
Query: 141 VLMNTLLDMYVKCGSLTRKLF-----DQYS----NWAASAYG------------------ 173
+ N+L+ M+ GS+ + D++ N +AY
Sbjct: 167 SVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRV 226
Query: 174 ----NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
N ++ML+G G+ +H+ +K G+ +LI MY G +D
Sbjct: 227 HKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDA 286
Query: 221 LALFNFMPERDV-----------------------------------VSWTGIIVGCFEC 245
+F M E+D+ V++T + C +
Sbjct: 287 ELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDP 346
Query: 246 SCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
T +ALV +Y+ ++ EA+K+F
Sbjct: 347 EFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDG------V 400
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI---NLLNFNSRFALQ 342
WN++I G+ +E+ +EA+ + G+ I+ T ++ L AC+ +LL +
Sbjct: 401 TWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLL----EHGMP 456
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+H I+ +G++ D V ++LI +YA+ G++ S+ +F RL K+ AW+ ++ HG
Sbjct: 457 IHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGH 516
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A +M + +V++F S L + LA L G+Q+H VK G + ++
Sbjct: 517 MEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASA 576
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+DMY KCGEIDD L + R +SW + ++G ++A F EMI +KP+
Sbjct: 577 TMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPD 636
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF+ +LSAC H G+VEE + SM E+G+ + H C++DLLG++G F +AE I
Sbjct: 637 HVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFI 696
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
EMP P +W S+L AC+TH N +L E LL P D S YV+ SN+ AT G W+
Sbjct: 697 KEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWE 756
Query: 643 SLSKVRKA-GKKLGEKKAGMSWIEVSS 668
+ K+R+ G +KK SW+++ +
Sbjct: 757 DVEKIRRQMGLNKIKKKPACSWVKLKN 783
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 199/458 (43%), Gaps = 66/458 (14%)
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
ML G QVH F VK G + TSL+ +Y G D + +F M ++VVSWT ++V
Sbjct: 45 MLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMV 104
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
A VD YG ++ V+N
Sbjct: 105 -----------AYVD-------------------------YGEPSM--------VMN--- 117
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+ + S GM + T +S + C++L N QV G ++ G E + V +
Sbjct: 118 -----IYRRMRSEGMSCNDNTMSSVISTCVSLE--NELLGYQVLGHVIKYGLETNVSVAN 170
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
+LI ++ G+V+ A +F + + D ++W+ +I ++GL + F M ++++
Sbjct: 171 SLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEI 230
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N +S++L C + +L+ G+ +H+ +K G+ +LI MY G +D +F
Sbjct: 231 NSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVF 290
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ M E+D++SW ++ Q+G +A+ M R N +TF L+AC
Sbjct: 291 QGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFAT 350
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML-- 598
E I ++ GL ++ +V L ++G +A+++ MP K D W +++
Sbjct: 351 EG-KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGG 408
Query: 599 --KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+ E K ++ E+ + P Y+ +SNV
Sbjct: 409 HADSEEPDEALKAFKLMREEGV------PINYITISNV 440
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 7/330 (2%)
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SG+V E++ + + G+ S + AC + +QVHG IV
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTAC-ERSEWMLIEGVQVHGFIVKV 59
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G D VG++L+ LY G A+++F + K+VV+W+ L++ +G S+ ++
Sbjct: 60 GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
R M + N +SSV+ C L + G QV +K G E SLI M+
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G +++ +F M E D +SW +I +NG KE++ F M + + N T +L
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
+ C ++ I S+ ++G ++ ++ + AG +DAE + M K D
Sbjct: 240 AGCGSVDNLKWGRGIH-SLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK-D 297
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLAT 620
W SM+ AC + L ++ +LLAT
Sbjct: 298 MISWNSMM-ACYAQDGNCLDAL---KLLAT 323
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 42/269 (15%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +GK LH +I GL +++ GN L+++YA + +A K+F M +++
Sbjct: 339 ALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRD 398
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD-LDLGRLI 127
V+W ++ + ++ P+ A++ + M E G V N S VL AC D L+ G I
Sbjct: 399 GVTWNALIGGHADSEEPDEALKAFKLMREEG-VPINYITISNVLGACLAPNDLLEHGMPI 457
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASA----------YGNV 175
H I + D + N+L+ MY KCG L + +FD+ ++ ASA +G++
Sbjct: 458 HAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHM 517
Query: 176 A-----LWNSMLSG-----------------------GKQVHAFCVKRGFEKEDVTLTSL 207
L +G G+Q+H VK G + ++
Sbjct: 518 EEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASAT 577
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWT 236
+DMY KCGEIDD L + R +SW
Sbjct: 578 MDMYGKCGEIDDVLRIIPRPINRSRLSWN 606
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 42/263 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG ++K G+ +H ++K+G + ++ N L++MY+D DA +F M K++
Sbjct: 239 LAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDM 298
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW +M+ Y + A++L M Y N +++ L ACS G+++H
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMF-YMRRGANYVTFTSALAACSDPEFATEGKILHA 357
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA------------- 169
+ L + ++ N L+ +Y K G + +K+F W A
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDE 417
Query: 170 ---------------------SAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+ G N +L G +HAF + GF+ ++ SLI
Sbjct: 418 ALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLI 477
Query: 209 DMYLKCGEIDDGLALFNFMPERD 231
MY KCG+++ +F+ + ++
Sbjct: 478 TMYAKCGDLNSSNNIFDRLTSKN 500
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
++G+ LH +K G + F + + MY ++D ++ ++ +SW + +++
Sbjct: 553 EEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSF 612
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+ + A ++ M+ G V+P+ + ++L ACS G ++ G ++ + +E
Sbjct: 613 SRHGFFEKAKETFHEMINLG-VKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKE 666
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 270/544 (49%), Gaps = 65/544 (11%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ G+ VHA RG E + T+L +MY KC D +F+ MP RD V+W ++ G
Sbjct: 241 LATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAG 300
Query: 242 ---------------------------------------------CFECSCFTL------ 250
C E F +
Sbjct: 301 YARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDE 360
Query: 251 -----SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+A++D+Y C + ARK+FD N WN+MI GY N EA+
Sbjct: 361 QVNVSTAILDVYCKCGAVDSARKVFDGMQDR------NSVSWNAMIKGYAENGDATEALA 414
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + G+ + + +AL AC L + +VH L+V G E + V + LI +
Sbjct: 415 LFKRMVGEGVDVTDVSVLAALHACGELGFLDE--GRRVHELLVRIGLESNVNVMNALITM 472
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + A ++F L K V+W+ +I+GCT++G + A LF M N + F +
Sbjct: 473 YCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTL 532
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S++ + ++ + + +H + ++ +++ LT+LIDMY KCG + +LF +
Sbjct: 533 VSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARD 592
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R V++W +I G G +G K A+ F+EM S PNE TFL VLSAC HAGLV+E
Sbjct: 593 RHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEY 652
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F+SMK +YGLEP +EHY MVDLLG+AG +A I +MP +P +++ +ML AC+ H
Sbjct: 653 FSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHK 712
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
N +L A+++ PE+ +V+L+N+YA +W +++VR A +K G +K G S +
Sbjct: 713 NVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIV 772
Query: 665 EVSS 668
++ +
Sbjct: 773 QLKN 776
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 227/516 (43%), Gaps = 55/516 (10%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR L+ C R + G+++H ++ GLS + L +MYA DA ++FD
Sbjct: 225 LRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFD 284
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M ++ V+W +V Y N A+ + M E P+ +VL AC+ + L
Sbjct: 285 RMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
R +H R + + +LD+Y KCG++ RK+FD + N WN+
Sbjct: 345 ACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDR------NSVSWNA 398
Query: 181 MLSG----GKQVHAFCVKRGF--EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
M+ G G A + + E DVT S++ CGE+ F+ E V
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGEL-------GFLDEGRRVH 451
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ +G E + ++AL+ MY C A ++FD+ Y WN+MI G
Sbjct: 452 ELLVRIG-LESNVNVMNALITMYCKCKRTDLAAQVFDEL------GYKTRVSWNAMILGC 504
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGYE 353
N +E+A+ L S + + DS+T S + A ++ + +R+ +HG + +
Sbjct: 505 TQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARW---IHGYSIRLHLD 561
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D V + LID+YA+ G V A LF+ + V+ W+ +I G HG +A LF +M
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-----KEDITLT------- 461
+S + N+ SVL CS HA V G E KED L
Sbjct: 622 KSSGKVPNETTFLSVLSACS-----------HAGLVDEGQEYFSSMKEDYGLEPGMEHYG 670
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+++D+ + G++ + + + MP +S G ++G
Sbjct: 671 TMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLG 706
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 166/450 (36%), Gaps = 118/450 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C +++ + +H ++ G + + +L +Y +++ A K+F
Sbjct: 326 DAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVF 385
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M +N VSW M+ Y N A+ L+ M+ G V+ A L AC G L
Sbjct: 386 DGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG-VDVTDVSVLAALHACGELGFL 444
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWN 179
D GR +HE + R LE + +MN L+ MY KC L ++FD+ Y WN
Sbjct: 445 DEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDEL------GYKTRVSWN 498
Query: 180 SMLSGGKQ--------------------------------------------VHAFCVKR 195
+M+ G Q +H + ++
Sbjct: 499 AMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRL 558
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+++ LT+LIDMY KCG + +LFN +R V++W +I G
Sbjct: 559 HLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHG-------------- 604
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+ S SG V A+ L + SSG
Sbjct: 605 -------------------------------YGSHGSGKV-------AVELFEEMKSSGK 626
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS------NLIDLYARL 369
+ TF S L AC S L G S + DY + ++DL R
Sbjct: 627 VPNETTFLSVLSAC-------SHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRA 679
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
G + A ++P + ++ G ++G K
Sbjct: 680 GKLHEAWSFIQKMPMEPGISVYGAMLGACK 709
>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 887
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 315/645 (48%), Gaps = 49/645 (7%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
SLH ++ GL + F G++LL MYA + A + F + K++ W M+ Y SN
Sbjct: 114 SLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNG 173
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+ AI ++ + + P+ + Y + +KACS+S LGR +H + LE +T +M
Sbjct: 174 FGHHAISTV-LVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVM 232
Query: 144 NTLLDMYVKC------GSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF 191
N+L+DMY + S+ RK+ + + WN+M SG K V +
Sbjct: 233 NSLVDMYFRARQKETAASVFRKIRQK----------DTVSWNTMFSGFAHDEDDKAVFGY 282
Query: 192 CV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ + GF+ +VT + L+ + GL +F + +
Sbjct: 283 LIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG-----------YTDNVL 331
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
+A+++M C +L A Y + + + N+ WN +I+GY L +E+A+ L
Sbjct: 332 VANAVINMLFRCGLLDRA------YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFR 385
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL-YA 367
+ G D +T+++ L A +R Q+H +I+ G+ V ++LI A
Sbjct: 386 SLVCIGERPDEFTYSAVLSAFQEA--HGARDHEQIHAIILKQGFASCQFVSTSLIKANAA 443
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIIS 426
G+V+S+L++ K ++V+W +I KHGLN LF +S ++FI++
Sbjct: 444 AFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILA 503
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE- 485
+VL C+ A +R + +H+ +K G ++++D Y KCGEI + F +
Sbjct: 504 TVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSA 563
Query: 486 -RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D + + ++ +G EA+ ++EM +++L P TF+ +LSAC H GLVE+
Sbjct: 564 TNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKL 623
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F++M YG+ P +Y C+VDLL + G D+A+ +I MPF+P +W S++ C H
Sbjct: 624 AFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIH 683
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
N +L + AEQ+L +P YV LSNVYA G W S + R+
Sbjct: 684 GNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRR 728
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 160/347 (46%), Gaps = 16/347 (4%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L Y+ +L A K+FD+ + N+ W +M+S N
Sbjct: 23 FNMNYLPIYYARRGLLDSALKVFDEMP------HRNLVSWTAMVSASTRNGAPHLGFRFF 76
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSR---FALQVHGLIVTSGYELDYIVGSNLID 364
+ SG C + ++ + L AC +++ +S AL +HG+ V +G + + VGS+L+
Sbjct: 77 VSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLL 136
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ G + +A F + KD+ W+ ++ G +G A M +S +++
Sbjct: 137 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 196
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
S +K CS A G+Q+H + E + SL+DMY + + + ++F+ +
Sbjct: 197 YISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 256
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-- 542
++D VSW + G + K Y +M ++ KPNE+TF +L R +G E A
Sbjct: 257 QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLL---RLSGAKENASL 313
Query: 543 -WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
IF ++ +G ++ ++++L + G D A + F+
Sbjct: 314 GLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR 359
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/530 (19%), Positives = 220/530 (41%), Gaps = 39/530 (7%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ A++ C G+ LHC +I L + N+L+ MY A +F ++ +
Sbjct: 198 ISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQ 257
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+ VSW TM + + ++ + A+ Y + +PN +S +L+ + LG
Sbjct: 258 KDTVSWNTMFSGFAHDE-DDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQ 316
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-G 185
I R + ++ N +++M +CG L R Y + + + N+ WN +++G G
Sbjct: 317 IFALAYRHGYTDNVLVANAVINMLFRCGLLDRA----YGFFCSLTFRNIVTWNEIIAGYG 372
Query: 186 KQVHAFCVKR--------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
H+ R G ++ T ++++ + + D + + ++ S
Sbjct: 373 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 432
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ + + +A + S+ ++ ++ K+ + W ++IS ++ +
Sbjct: 433 VSTSLIKANA---AAFGSVQSSLKIIEDSGKM-------------ELVSWGAIISAFLKH 476
Query: 298 EQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N+E I L + S D + + L AC N R +H L++ +G+ +
Sbjct: 477 GLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHF 534
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V S ++D YA+ G + SA F + D + ++ ++ HGL A L+ +M
Sbjct: 535 CVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMT 594
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEI 473
+ + ++L CS L + +GK + + G L+D+ + G +
Sbjct: 595 KAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLL 654
Query: 474 DDGLALFKFMPERD-VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
D+ + MP + W ++ GC +G + + ++++ R+ P+
Sbjct: 655 DEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQIL--RMAPS 702
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y + G +D L +F MP R++VSWT ++ +NG +F MI+S PNE +
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 527 LGVLSACRHAGLVEEAWTIFTSMK-----PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+L+AC H+ + + + ++ GL+ + ++ + + G A++
Sbjct: 92 ATMLTAC-HSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRA 150
Query: 582 IAEMPFKPDKTIWASMLKACET----HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A + K D T W +ML+ + H+ V ++ LA P +Y +S V A
Sbjct: 151 FAHIRNK-DLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLA-----PDRYTYISAVKA 203
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 192/707 (27%), Positives = 325/707 (45%), Gaps = 99/707 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + C G SLH ++ GLS D + G++L+S YA F ++ K+
Sbjct: 47 LDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKV 106
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++N+V WTT++ +Y+ + A ++ M E G ++P ++L S
Sbjct: 107 FDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESG-IQPTSVTLLSLLPGIS---K 162
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASA 171
L L +H I E D L N++++MY KCG + R+LF+ N SA
Sbjct: 163 LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSA 222
Query: 172 YGNV---------------------------ALWNSMLSG----GKQVHAFCVKRGFEKE 200
Y + AL S + G GK VH +K G +
Sbjct: 223 YSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNID 282
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
++L+ +YL+C +D +F E+DVV WT +I G + C
Sbjct: 283 QHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDC------------- 329
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
++A+ + + S + +
Sbjct: 330 ---------------------------------------ADKALGVFYQMIESNVKPSTA 350
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T S L AC L + +HG ++ G LD ++L+ +YA+ ++ + +F+
Sbjct: 351 TLASGLAACAQLGCCD--IGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFN 408
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
++ +KD+V+W+ ++ G K+G S F +M S + ++S+L+ C +L +
Sbjct: 409 KMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQ 468
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK +H F ++ +T T+L+DMY KCG +++ F M +RD+V+W+ +IVG G
Sbjct: 469 GKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG+ + A+ + E + + ++PN + F+ VLSAC H GL+ + +I+ SM ++ + P+LE
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLE 588
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H C+VDLL +AG D+A M +P + +L AC + +L +IA +
Sbjct: 589 HRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFEL 648
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P DP +V L+N YA++ WD + K + LG KK G S IEV
Sbjct: 649 KPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEV 695
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 9/320 (2%)
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
A+G +NS++S + + + + + +D+YTF S KAC NL F+
Sbjct: 10 AHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSH-- 67
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
L +H +V +G D +GS+LI YA+ G + ++F + K++VV W+ +I ++
Sbjct: 68 GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSR 127
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G +A+ +F+ M S + S+L ++ L +H + GFE +
Sbjct: 128 EGDIDIAFSMFKQMRESGIQPTSVTLLSLLP---GISKLPLLLCLHCLIILHGFESDLAL 184
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
S+++MY KCG I D LF+ + RD+VSW ++ + G +E + Q M +
Sbjct: 185 SNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDI 244
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
KP++ TF LSA G + + M K ++ H+E +V L + C D A
Sbjct: 245 KPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVES--ALVVLYLRCRCLDPA 302
Query: 579 EQLIAEMPFKPDKTIWASML 598
++ K D +W +M+
Sbjct: 303 YKVFKSTTEK-DVVMWTAMI 321
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 391 SGLIM-----GCTKHGLNSLAYLL------------FRDMINSNQDVNQFIISSVLKVCS 433
SGLI GCTK NSL L + M ++ ++ + S+ K C+
Sbjct: 2 SGLIHESIAHGCTK-SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L G +H V G + +SLI Y K G I G +F M +R+VV WT
Sbjct: 61 NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II + G A + F++M +S ++P +T L +L + +
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL----PLLLCLHCLIILH 176
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G E L MV++ G+ G DA +L + + D W S+L A ++ I
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFESIGCR-DIVSWNSLLSA---YSKIGATEEI 232
Query: 614 AEQLLATSPED--PSKYVMLSNVYAT 637
+ L A ED P K S + A+
Sbjct: 233 LQLLQAMKIEDIKPDKQTFCSALSAS 258
>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
Length = 805
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 346/684 (50%), Gaps = 48/684 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + + L+ C + R++ GK +H +K GL++D F G++L+ +Y+ + D+ K
Sbjct: 142 LDEKTVTFGLKSCTELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKA 201
Query: 61 FDEMARKNIVSWTTMVTAYTSN-KRPNW-AIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
F+E+ K+IVS+T+M+T Y+ N +W A + + M + ++E N ++L+
Sbjct: 202 FEEILDKDIVSYTSMITGYSENMDSTSWNAFEIASDMSQ-SNLEVNRVTLVSLLQVAGNL 260
Query: 119 GDLDLGRLIHERITREKLEY-DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
G + G+ +H TR + D VL +L+ MY++CG+ + S + +VA
Sbjct: 261 GAIREGKSVHCYSTRRGIGVSDEVLGTSLVHMYMQCGA-----YQLASASLKNLVQSVAS 315
Query: 178 WNSMLSG-------GKQVHAFCVKRGFEK---EDVTLTSLIDMYLKCGEI-DDGLA--LF 224
WN+ML+G G +H F V K + VT +LI C E+ + G A +
Sbjct: 316 WNAMLAGLVRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLIS---ACAELCNSGYAASVH 372
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
++ R + +AL+++Y C + ++ LFDQ ++
Sbjct: 373 AYLIRRSI-----------PLDVVLATALIEVYMKCTRIMSSKHLFDQL------VVKDL 415
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQV 343
+N+MI GY+ N EAI LL + + + + T S L A + +F R+ +
Sbjct: 416 VSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKDFVRGRW---I 472
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG + G+ + + + +I +Y+ G + SA +F L KK++++W+ ++MGC G
Sbjct: 473 HGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFCGHG 532
Query: 404 SLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
LF+ ++ + + + + + ++ S L L+ KQ+H F + EK+ T+ S
Sbjct: 533 GETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINS 592
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LI Y KCG +D + LF + RD+ SW +I G +G + + F+ M + + P+
Sbjct: 593 LITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPD 652
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
+TF VLSAC HAGL++E IF SM Y + P EHY C+VDLL +AG ++ +LI
Sbjct: 653 GLTFSSVLSACSHAGLIKEGLHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEEGYKLI 712
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
++ ++L AC T+ NT L +I+ +LL ++P Y ++S V+A G W+
Sbjct: 713 KLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPGTYALISEVFAQKGQWN 772
Query: 643 SLSKVRKAGKKLGEKK-AGMSWIE 665
+ +R K+ G +K G S IE
Sbjct: 773 KSANIRNRAKENGSRKLPGSSLIE 796
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 153/648 (23%), Positives = 286/648 (44%), Gaps = 77/648 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + ++C RS+K+ LH R++ GL +D+ G+ +L YA L F
Sbjct: 45 DVDKFSLLFQNCTDVRSLKK---LHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCF 101
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ W +++ P AI LY L+ + + + LK+C+ +L
Sbjct: 102 HGFLNDDLAQWNSVIVDIFRAGYPEEAILLYRG-LKLRQIGLDEKTVTFGLKSCTELRNL 160
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + L D + ++L+ +Y K + ++K F++ + ++ +
Sbjct: 161 LLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILD------KDIVSYT 214
Query: 180 SMLSGGKQV------HAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
SM++G + +AF + + E VTL SL+ + G I +G ++ +
Sbjct: 215 SMITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYST 274
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
R + + ++G ++LV MY C + S+ + +VA WN
Sbjct: 275 RRG-IGVSDEVLG---------TSLVHMYMQCGA-------YQLASASLKNLVQSVASWN 317
Query: 289 SMISGYVLNEQNEEAITLLS-HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+M++G V Q+ AI S +H + DS T+ + + AC L NS +A VH +
Sbjct: 318 AMLAGLVRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLISACAELC--NSGYAASVHAYL 375
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ LD ++ + LI++Y + + S+ LF +L KD+V+++ +I G ++G+ + A
Sbjct: 376 IRRSIPLDVVLATALIEVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAI 435
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L ++M+ N I S+L + RG+ +H F ++ GF +I MY
Sbjct: 436 ALLKEMVAECVAPNFVTILSLLAAIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMY 495
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL-KPNEITF 526
CG+I +F + +++++SWT +++GC G E + FQ ++Q KP+ +T
Sbjct: 496 SGCGKITSARTIFASLEKKNLISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTV 555
Query: 527 LGVLSACRHAG---------------LVEEAWTIFTSMKPEY----------GLEPHLEH 561
+ + A G L+E+ S+ Y GL LEH
Sbjct: 556 MTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLSLEH 615
Query: 562 -----YYCMVDLLGQAGCFD---DAEQLIAEMPFKPDKTIWASMLKAC 601
+ M+ G G + + +L+ E PD ++S+L AC
Sbjct: 616 RDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSAC 663
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 237/431 (54%), Gaps = 21/431 (4%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F SAL+DMYS C L +ARKLFD+ NV W SMISGYV NE+ EA+ L
Sbjct: 122 FVASALIDMYSKCGYLNDARKLFDEIPE------RNVVSWTSMISGYVQNERAREAVFLF 175
Query: 308 SH-----------IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
I G+ +DS + AC + VHGL V G+E
Sbjct: 176 KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV--KSVTECVHGLAVKKGFEGCL 233
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
VG+ L+D YA+ G + + ++F + + DV +W+ LI ++GL+ A+ LF DM+
Sbjct: 234 AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKR 293
Query: 417 NQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ N +S+VL C+ +L+ GK +H VK E + TS++DMY KCG ++
Sbjct: 294 GEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEM 353
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
F + ++V SWT ++ G G +G KEA+ F EMI+ +KPN ITF+ VL+AC H
Sbjct: 354 ARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSH 413
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGL++E W F MK E+ +EP +EHY CMVDLLG+AG +A LI EM KPD +W
Sbjct: 414 AGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWG 473
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
S+L AC H N +L I A +L P + YV+LSN+YA G WD + ++R K G
Sbjct: 474 SLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHG 533
Query: 656 -EKKAGMSWIE 665
K G S +E
Sbjct: 534 LLKTPGYSIVE 544
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 21/354 (5%)
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R +F +Y S Y WNS+I+ + + + +A+ S + + + TF +
Sbjct: 39 RSMFGKYVD-KTSVYS----WNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTI 93
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
K+C +L + + Q+H GY D V S LID+Y++ G + A +LF +P+++
Sbjct: 94 KSCSSLYDLCA--GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERN 151
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD-----------VNQFIISSVLKVCSCL 435
VV+W+ +I G ++ A LF++ + ++ V+ ++ V+ C+ +
Sbjct: 152 VVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV 211
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+ VH VK+GFE +L+D Y KCGEI +F M E DV SW +I
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 496 VGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
QNG + EA + F +M++ ++ N +T VL AC H+G ++ I + +
Sbjct: 272 AVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV-VKME 330
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
LE +L +VD+ + G + A + + K K+ W M+ H + K
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS-WTVMVAGYGMHGHGK 383
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 174/461 (37%), Gaps = 141/461 (30%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + GK +H + +G DIF + L+ MY+ LNDA KLFDE+ +N+
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHML-----EYGSVEPNGFMYSAVLKACSLSGDL--- 121
VSWT+M++ Y N+R A+ L+ L +Y + G +VL C +S
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 122 --DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVAL 177
+ +H ++ E + NTL+D Y KCG S++RK+FD +V
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE------TDVCS 266
Query: 178 WNSMLS----GGKQVHAFC-----VKRG-------------------------------- 196
WNS+++ G V AF VKRG
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 197 --FEKED--VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
E ED V TS++DMY KCG ++ F+ + ++V SWT ++ G
Sbjct: 327 VKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAG----------- 375
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y ++ +EA+ + +
Sbjct: 376 -----------------------------------------YGMHGHGKEAMKVFYEMIR 394
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--------ELDYIVG----S 360
G+ + TF S L AC H ++ G+ E D G S
Sbjct: 395 CGIKPNYITFVSVLAAC-------------SHAGLLKEGWHWFNKMKCEFDVEPGIEHYS 441
Query: 361 NLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++DL R G +K A L + K D + W L+ C H
Sbjct: 442 CMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 151/354 (42%), Gaps = 55/354 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +K G + GN L+ YA ++ + K+FD M ++ SW +++ Y N
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
A L++ M++ G V N SAVL AC+ SG L +G+ IH+++ + +LE + V+
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339
Query: 145 TLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQ---VHAFCV 193
+++DMY KCG + RK FD+ NV W M++G GK+ V +
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKR------KNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSA 252
+ G + +T S++ G + +G FN M E DV E S
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDV-----------EPGIEHYSC 442
Query: 253 LVDMYSNCNVLCEARKLFDQ------YSSW-----AASAYGNVALWN-SMISGYVLNEQN 300
+VD+ L EA L + + W A + NV L S + L+ N
Sbjct: 443 MVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSN 502
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
LLS+I++ D R ++ HGL+ T GY +
Sbjct: 503 CGYYVLLSNIYADAGRWDDVE--------------RMRILMKNHGLLKTPGYSI 542
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH----- 535
K++ + V SW II ++G + +A+ F M + L PN TF + +C
Sbjct: 44 KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103
Query: 536 AG-LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
AG + + +F YG + + ++D+ + G +DA +L E+P + + W
Sbjct: 104 AGKQIHQQAFVFG-----YGSDIFVAS--ALIDMYSKCGYLNDARKLFDEIP-ERNVVSW 155
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPED 624
SM+ + + + ++ L D
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETD 185
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 310/612 (50%), Gaps = 68/612 (11%)
Query: 58 HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
H LF+ N+ +T+M+ Y+ + + +Y M G V P+ F+Y ++K+
Sbjct: 54 HLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCG-VRPDAFVYPILIKSAGT 112
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV 175
G +G H + + D + N ++DMY + G + RK+FD+ ++ V
Sbjct: 113 GG---IG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYER----KV 163
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
A WN+M+SG Y K LF+ MPER+V++W
Sbjct: 164 ADWNAMVSG--------------------------YWKWESEGQAQWLFDVMPERNVITW 197
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T ++ G Y+ L AR+ FD +V WN+M+SGY
Sbjct: 198 TAMVTG---------------YAKVKDLEAARRYFDCMPE------RSVVSWNAMLSGYA 236
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N EEA+ L + ++G+ D T+ + + AC + + A + + +L+
Sbjct: 237 QNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS--RGDPCLAASLVRTLHQKRIQLN 294
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
V + L+D+YA+ G++ SA +LF+ +P ++VV W+ +I G ++G +++A LF++MI
Sbjct: 295 CFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT 354
Query: 416 SNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + ++ + SV+ C L +L G V F + + ++I MY +CG ++
Sbjct: 355 AKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSME 414
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
D +F+ M RDVVS+ +I G +G EAI M + ++P+ +TF+GVL+AC
Sbjct: 415 DAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 474
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAGL+EE +F S+K +P ++HY CMVDLLG+ G +DA++ + MP +P ++
Sbjct: 475 HAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVY 529
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
S+L A H +L + A +L P++ +++LSN+YA+ G W + ++R+A KK
Sbjct: 530 GSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKG 589
Query: 655 GEKK-AGMSWIE 665
G KK G SW+E
Sbjct: 590 GVKKTTGWSWVE 601
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 172/379 (45%), Gaps = 48/379 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ T +++ YA L A + FD M +++VSW M++ Y N A+RL++ M
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 251
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ G +EP+ + V+ ACS GD L + + +++++ + + LLDMY K G
Sbjct: 252 VNAG-IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGD 310
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----------VHAFCVKRGFEKEDVT 203
L RKLF+ NV WNSM++G Q + ++VT
Sbjct: 311 LDSARKLFNTMPG------RNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 364
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ S+I G ++ G + F+ E + + S +A++ MYS C +
Sbjct: 365 MVSVISACGHLGALELGNWVVRFLTENQI-----------KLSISGHNAMIFMYSRCGSM 413
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+A+++F + ++ +V +N++ISG+ + EAI L+S + G+ D TF
Sbjct: 414 EDAKRVFQEMAT------RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 467
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYE---LDYIVGSNLIDLYARLGNVKSALELFH 380
L AC S L G V + +D+ + ++DL R+G ++ A
Sbjct: 468 GVLTAC-------SHAGLLEEGRKVFESIKDPAIDHY--ACMVDLLGRVGELEDAKRTME 518
Query: 381 RLPKKDVVAWSGLIMGCTK 399
R+P + G ++ ++
Sbjct: 519 RMPMEPHAGVYGSLLNASR 537
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
++LH + I+ + F LL MYA F L+ A KLF+ M +N+V+W +M+ Y N
Sbjct: 284 RTLHQKRIQL----NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQN 339
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
+ AI L+ M+ + P+ +V+ AC G L+LG + +T +++
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV--- 193
N ++ MY +CGS+ +++F + A +V +N+++SG G V A +
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEM------ATRDVVSYNTLISGFAAHGHGVEAINLMST 453
Query: 194 --KRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
+ G E + VT ++ G +++G +F
Sbjct: 454 MKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF 486
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + CG +++ G + + + + I N ++ MY+ S+ DA ++F EMA
Sbjct: 365 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 424
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VS+ T+++ + ++ AI L + M E G +EP+ + VL ACS +G L+ GR
Sbjct: 425 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKE-GGIEPDRVTFIGVLTACSHAGLLEEGR 483
Query: 126 LIHERITREKLEYDTVLMNTL 146
+ E I +++ +++ L
Sbjct: 484 KVFESIKDPAIDHYACMVDLL 504
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 190/673 (28%), Positives = 335/673 (49%), Gaps = 42/673 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR---KNIVSWTT 74
++ G+ +H +I ++ GN L+SMY+ SL DA + FD + R +++V+W
Sbjct: 22 NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 81
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG--RLIHERIT 132
M++A+ N A++L+ M G+ PN + +VL +C +G L L R IH RI
Sbjct: 82 MISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 141
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
+E + + L+D Y K GSL ++F + S+ S ++ ++M+S
Sbjct: 142 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST--SLVTCSAMISA------ 193
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
C + G+ +E + L +++ G G+ L + + ++ E + +
Sbjct: 194 -CWQNGWPQESLRLFYAMNLE---GTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVV 249
Query: 251 SA---------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
SA L+ Y+ N L AR FD S +V WN+M + Y+ + +
Sbjct: 250 SATRDNVLGTTLLTTYARSNDLSRARATFDAIQS------PDVVSWNAMAAAYLQHHRPR 303
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLL-NFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + G+ TF +AL AC S ++ L+ +G E D V +
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 363
Query: 361 NLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN- 417
+++YA+ G++ A +F R+ ++D + W+ ++ HGL A+ LF+ M
Sbjct: 364 ATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL 423
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N+ +VL + S+ +G+++HA V GFE + + +L++MY KCG +DD
Sbjct: 424 VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQ 483
Query: 478 ALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
A+F + DV++WT ++ G Q G+A+ A+ F M Q ++PN ITF+ L+AC H
Sbjct: 484 AIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNH 543
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
G +E+ + + M P++G+ P +H+ C+VDLLG+ G D+AE+L+ E + D W
Sbjct: 544 GGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWM 602
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC+ + AE+++ PE S Y++L+++YA G W+ + +RK G
Sbjct: 603 ALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKG 662
Query: 656 -EKKAGMSWIEVS 667
G S +EV+
Sbjct: 663 IRADPGCSAVEVN 675
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 194/685 (28%), Positives = 316/685 (46%), Gaps = 127/685 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL--SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C R + G+++H +++ G D+F N LL+MY L A
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR--------- 116
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
RL++ M E V + +++A + GD + +
Sbjct: 117 ----------------------RLFDRMPERNMVS-----FVTLVQAHAQRGDFEAAAAL 149
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
R+ E E + ++ T+L + + A A G L+GG
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAI----------------AMDAAG--------LAGG-- 183
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------- 240
VH+ K G + + LID Y C + D +FN + +D V WT ++
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 241 ----------------------------------------GCFECSCFTLS--------A 252
G C+ TL+ A
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+DMY+ C + +AR F+ Y +V L + MIS Y + QNE+A L +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIP------YDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
S + + Y+ +S L+AC N++ + F Q+H + G+E D VG+ L+D YA+ ++
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLD--FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
S+L++F L + V+W+ +++G ++ GL A +F +M + Q SSVL+ C
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ AS+R Q+H K F + + SLID Y KCG I D L +F+ + ERD++SW
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
II G +G+A +A+ F M +S ++ N+ITF+ +LS C GLV ++F SM+ +
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID 595
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G++P +EHY C+V LLG+AG +DA Q I ++P P +W ++L +C H N L
Sbjct: 596 HGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655
Query: 613 IAEQLLATSPEDPSKYVMLSNVYAT 637
AE++L P+D + YV+LSN+YA
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAA 680
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 13/329 (3%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKS 374
+DS+ L+ CI ++R VHG +V G LD + L+++Y +LG + S
Sbjct: 57 VDSFACARQLQGCI--ARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A LF R+P++++V++ L+ + G A LFR + +VNQF+++++LK+
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ + VH+ K G + + LID Y C + D +F + +D V WT +
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF-TSMKPEY 553
+ +N + A F +M S KPN VL A V I ++K
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML--KACETHNNTKLVS 611
EPH+ ++D+ + G DA +P+ D I S + + +++ N +
Sbjct: 295 DTEPHVGG--ALLDMYAKCGDIKDARLAFEMIPY--DDVILLSFMISRYAQSNQNEQAFE 350
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ L S P++Y + S + A M
Sbjct: 351 LFLR--LMRSSVLPNEYSLSSVLQACTNM 377
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 271/539 (50%), Gaps = 41/539 (7%)
Query: 144 NTLLDMYVKCG------SLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQV 188
N LL+M ++C + TR LF Q N+ LWN+M+ G +
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQ------PNIFLWNTMIRGLVSNDCFDDAIEF 99
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ GF + T ++ + ++ G+ + T ++ G F+C F
Sbjct: 100 YGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH-----------TLVVKGGFDCDVF 148
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
++LV +Y+ C L +A K+FD NV W ++ISGY+ + EAI +
Sbjct: 149 VKTSLVCLYAKCGYLEDAHKVFDDIPD------KNVVSWTAIISGYIGVGKFREAIDMFR 202
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ + DS+T L AC L + NS +H I+ G + VG++L+D+YA+
Sbjct: 203 RLLEMNLAPDSFTIVRVLSACTQLGDLNS--GEWIHKCIMEMGMVRNVFVGTSLVDMYAK 260
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
GN++ A +F +P+KD+V+W +I G +GL A LF M N + + + V
Sbjct: 261 CGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGV 320
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L C+ L +L G+ V + F + T+LID+Y KCG + +FK M E+D
Sbjct: 321 LSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDR 380
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
V W II G NG K + F ++ + +KP+ TF+G+L C HAGLV+E F S
Sbjct: 381 VVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNS 440
Query: 549 MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
M + L P +EHY CMVDLLG+AG D+A QLI MP + + +W ++L AC H +T+
Sbjct: 441 MYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQ 500
Query: 609 LVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEV 666
L + +QL+ P + YV+LSN+Y+ WD +KVR +K +K G SWIEV
Sbjct: 501 LAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEV 559
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 219/545 (40%), Gaps = 123/545 (22%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
++GL D + N +L DF+ N LF ++ + NI W TM+ SN + AI
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
Y M G + PN F + VLKAC+ DL LG IH + + + D + +L+ +Y
Sbjct: 99 FYGLMRSEGFL-PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 151 VKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------------------ 184
KCG L K+FD + NV W +++SG
Sbjct: 158 AKCGYLEDAHKVFDDIPD------KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAP 211
Query: 185 --------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
G+ +H ++ G + TSL+DMY KCG ++ ++F
Sbjct: 212 DSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVF 271
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+ MPE+D+VSW +I G
Sbjct: 272 DGMPEKDIVSWGAMIQG------------------------------------------- 288
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
Y LN +EAI L + + D YT L AC L V
Sbjct: 289 ---------YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGAL--ELGEWVS 337
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
GL+ + + + ++G+ LIDLYA+ G++ A E+F + +KD V W+ +I G +G
Sbjct: 338 GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVK 397
Query: 405 LAYLLFRDM--INSNQDVNQFIISSVLKVCSCLASLRRGKQ-----VHAFCVKRGFEKED 457
+++ LF + + D N FI +L C+ + G++ F + E
Sbjct: 398 ISFGLFGQVEKLGIKPDGNTFI--GLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEH-- 453
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++D+ + G +D+ L + MP E + + W ++ C + + A +++I+
Sbjct: 454 --YGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511
Query: 517 SRLKP 521
L+P
Sbjct: 512 --LEP 514
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 176/449 (39%), Gaps = 99/449 (22%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C + ++ G +H ++K G D+F +L+ +YA L DAHK+FD++ KN
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT +++ Y + AI ++ +LE ++ P+ F VL AC+ GDL+ G IH
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEM-NLAPDSFTIVRVLSACTQLGDLNSGEWIH 236
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------------ 162
+ I + + + +L+DMY KCG++ R +FD
Sbjct: 237 KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPK 296
Query: 163 ---------QYSNWAASAYGNVALWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
Q N Y V + ++ L G+ V + F V T+LI
Sbjct: 297 EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALI 356
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
D+Y KCG + +F M E+D V W II G
Sbjct: 357 DLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGL-------------------------- 390
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
++GYV + + L + G+ D TF L
Sbjct: 391 ---------------------AMNGYV-----KISFGLFGQVEKLGIKPDGNTFIGLLCG 424
Query: 329 CIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KK 385
C + L++ R+ ++ + Y ++DL R G + A +L +P +
Sbjct: 425 CTHAGLVDEGRRYFNSMYRFFSLTPSIEHY---GCMVDLLGRAGLLDEAHQLIRNMPMEA 481
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ + W L+ C H LA L + +I
Sbjct: 482 NAIVWGALLGACRIHRDTQLAELALKQLI 510
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 44/407 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L C Q + G+ +H I++ G+ +++F G +L+ MYA ++ A +FD M
Sbjct: 216 IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+IVSW M+ Y N P AI L+ M + +V+P+ + VL AC+ G L+LG
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAIDLFLQM-QRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+ + R + Y+ VL L+D+Y KCGS++R + + + +WN+++SG
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR----AWEVFKGMKEKDRVVWNAIISGL 390
Query: 185 ---GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G +F + K G + + T L+ G +D+G FN M ++ +
Sbjct: 391 AMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPS 450
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
GC +VD+ +L EA +L A N +W +++ +
Sbjct: 451 IEHYGC----------MVDLLGRAGLLDEAHQLIRNMPMEA-----NAIVWGALLGACRI 495
Query: 297 NEQNEEAITLLSHI------HSSGMCIDSYTFTSALK---ACINLLNFNSRFALQVHGL- 346
+ + A L + +S + S +++ LK A L+ N + + G
Sbjct: 496 HRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCS 555
Query: 347 -IVTSGYELDYIVGSNLIDL----YARLGNVKSALELFHRLPKKDVV 388
I G +++VG L YA+L + +++ +P D V
Sbjct: 556 WIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFV 602
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 208/720 (28%), Positives = 332/720 (46%), Gaps = 134/720 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTG-NNLLSMYADFTSLNDAHKLFDEMA--R 66
L C + R++ G+ +H ++K L+ T NL +YA + A +FDE+ R
Sbjct: 6 LESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
N ++W M+ AY SN A+ LY ML G V P F Y VLKAC+ ++ G+L
Sbjct: 66 INPIAWDLMIRAYVSNGFAEKALDLYYKMLNSG-VRPTKFTYPFVLKACAGLRAIEDGKL 124
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
IH +VKC SN+AA Y
Sbjct: 125 IHS--------------------HVKC-----------SNFAADMY-------------- 139
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII------- 239
T+L+D Y KCGE+D + +F+ MP+RD+V+W +I
Sbjct: 140 ----------------VCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183
Query: 240 -----VGCF------ECSCFTLSALV---------------------------------- 254
+G F +C LS +V
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 255 ----DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA--ITLLS 308
D+Y+ + AR++FD + N W++MI GYV NE +EA + L
Sbjct: 244 TGILDVYAKSKCIIYARRVFD------SDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQM 297
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+++ + L C + + VH + +G+ LD VG+ +I YA+
Sbjct: 298 LVNADMAMVTPVAIGLILMGCARFGDLSG--GRCVHCYAIKAGFILDLTVGNTVISFYAK 355
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G++ A F + KD+V+++ LI GC ++ ++ LF M +S + + +
Sbjct: 356 YGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGI 415
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L CS LA+L G H +CV G+ +L+DMY KCG++ +F M +RD+
Sbjct: 416 LTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDI 475
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTS 548
VSW ++ G G +G KEA++ F M + + P+E+T L +LSAC H+GLV+E +F S
Sbjct: 476 VSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNS 535
Query: 549 M-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
M + ++ + P L+HY CM DLL +AG D+A + +MPF+PD + ++L AC T+ N
Sbjct: 536 MSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNV 595
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+L + +++++ + E V+LSN Y+ W+ +K+R KK G K G SW++V
Sbjct: 596 ELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDV 654
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 53/287 (18%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+L IV G+ ++++GK++H + G S D+ +L +YA + A ++F
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML---EYGSVEPNGFMYSAVLKACSLS 118
D +KN V+W+ M+ Y N+ A ++ ML + V P +L C+
Sbjct: 264 DSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAI--GLILMGCARF 321
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
GDL GR +H + D + NT++ Y K GSL D + + ++ +
Sbjct: 322 GDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLC----DAFRQFTEIGLKDIVSY 377
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
NS++SG G H +CV
Sbjct: 378 NSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVV 437
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
G+ +L+DMY KCG++ +F+ M +RD+VSW ++ G
Sbjct: 438 NGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFG 484
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 277/544 (50%), Gaps = 69/544 (12%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII-- 239
+ GG+Q+H F +K GF + + SL+ YLK +D +F+ M ERDV+SW II
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 240 ---------------------------------VGCFEC---------------SCFT-- 249
GC + +CF+
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 250 ---LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ L+DMYS C L A+ +F + S + +Y SMI+GY EA+ L
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY------TSMIAGYAREGLAGEAVKL 233
Query: 307 LSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ G+ D YT T+ L C LL+ R VH I + D V + L+D
Sbjct: 234 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR----VHEWIKENDLGFDIFVSNALMD 289
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQF 423
+YA+ G+++ A +F + KD+++W+ +I G +K+ + A LF ++ + ++
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
++ VL C+ L++ +G+++H + ++ G+ + SL+DMY KCG + LF +
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+D+VSWT +I G G +G KEAIA F +M Q+ ++ +EI+F+ +L AC H+GLV+E W
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 469
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F M+ E +EP +EHY C+VD+L + G A + I MP PD TIW ++L C
Sbjct: 470 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 529
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMS 662
H++ KL +AE++ PE+ YV+++N+YA W+ + ++RK G++ K G S
Sbjct: 530 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 589
Query: 663 WIEV 666
WIE+
Sbjct: 590 WIEI 593
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 199/484 (41%), Gaps = 111/484 (22%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS+ G+ LH I+K G + GN+L++ Y ++ A K+FDEM ++++SW +++
Sbjct: 58 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 117
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y SN + ++ ML G +E + +V C+ S + LGR +H +
Sbjct: 118 NGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN--------------VALWNS 180
+ NTLLDMY KCG L + +F + S+ + +Y + V L+
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236
Query: 181 M------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
M L GK+VH + + + +L+DMY KCG
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 217 IDDGLALFNFMPERDVVSWTGII-------------------------------VGCFEC 245
+ + +F+ M +D++SW II V C
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 246 SCFTLSA-------------------------LVDMYSNCNVLCEARKLFDQYSSWAASA 280
+C +LSA LVDMY+ C L A LFD +S
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS----- 411
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSR 338
++ W MI+GY ++ +EAI L + + +G+ D +F S L AC + L++ R
Sbjct: 412 -KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 470
Query: 339 -FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMG 396
F + H + E Y + ++D+ AR G++ A +P D W L+ G
Sbjct: 471 FFNIMRHECKIEPTVE-HY---ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526
Query: 397 CTKH 400
C H
Sbjct: 527 CRIH 530
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + L C + R + +GK +H I + L DIF N L+ MYA S+ +A +F
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 304
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM K+I+SW T++ Y+ N N A+ L+N +LE P+ + VL AC+
Sbjct: 305 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 364
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWN 179
D GR IH I R D + N+L+DMY KCG+ L LFD A ++ W
Sbjct: 365 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI------ASKDLVSWT 418
Query: 180 SMLSG------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
M++G GK+ A + G E ++++ SL+ G +D+G FN M
Sbjct: 419 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 475
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 80/552 (14%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP--ERDVVSWTGII 239
L+ GKQ+H+ + GF ++TSLI+MY KCG++ + + +F + P ER+V ++ II
Sbjct: 27 LNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF-YDPCHERNVFAYNAII 85
Query: 240 VG---------------------------CFEC---SC---------------------- 247
G F C +C
Sbjct: 86 SGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLLKMGLELDV 145
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F SALV+ Y + +A+K+F + S +V LWN+MI+GY +EA+ +
Sbjct: 146 FVGSALVNTYLKNGSMEDAQKVFGELS------IRDVVLWNAMINGYAKIGCLDEALEVF 199
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ----VHGLIVTSGYELDYIVGSNLI 363
+H G+ +T T L F SR L VHG+++ GY+ V + LI
Sbjct: 200 RRMHVKGVAPSRFTITGILSV------FASRGDLDNGKTVHGIVMKMGYDSGVSVSNALI 253
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+Y + ++ AL +F + +KD+ +W+ +I + G + LF M+ S +
Sbjct: 254 DMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED--------ITLTSLIDMYLKCGEIDD 475
I++VL CS LA+L G+++H + + G K+D + +++DMY KCG +++
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
L +F M ++DV SW +I+G G +G A EA+ F +M ++ KPNE+T +GVLSAC H
Sbjct: 374 ALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNH 433
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AG V M+ +G+ P +EHY C++D+LG+AG +DA +++ +MP + + +W
Sbjct: 434 AGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC H N +L I A Q+L PE YV++SNVY +G ++ + +VRK K+
Sbjct: 494 ALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQN 553
Query: 656 EKK-AGMSWIEV 666
KK G SWIE+
Sbjct: 554 VKKTPGCSWIEL 565
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/613 (22%), Positives = 254/613 (41%), Gaps = 132/613 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
++ + V L+ C +++ +GK LH +I YG S + +L++MY+ + +A +F
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 62 -DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
D +N+ ++ +++ + SN + + Y M G V P+ + + V++ C +
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEG-VMPDKYTFPCVVRTCCEVME 128
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
+ + IH + + LE D + + L++ Y+K GS+ +K+F + S +V LW
Sbjct: 129 V---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELS------IRDVVLW 179
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+M++G GK VH +K
Sbjct: 180 NAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMK 239
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G++ +LIDMY KC I D L +F + E+D+ SW II
Sbjct: 240 MGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSII--------------- 284
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
++ C +LFD+ + SG
Sbjct: 285 SVHEQCGDHDGTLRLFDK-------------------------------------MLGSG 307
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD--------YIVGSNLIDLY 366
+ D T T+ L AC +L ++HG ++ +G D +V + ++D+Y
Sbjct: 308 ILPDLVTITTVLPACSHLAAL--MHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMY 365
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A+ G++ +AL++F + KKDV +W+ +IMG HG A +F M + N+ +
Sbjct: 366 AKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLV 425
Query: 427 SVLKVCSCLASLRRGKQVHA-----FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
VL C+ + G+ A F V E T +IDM + G ++D + +
Sbjct: 426 GVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEH----YTCVIDMLGRAGHLEDAYEIVQ 481
Query: 482 FMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-GLV 539
MP + + V W ++ C +G A+ A ++++Q L+P ++S G
Sbjct: 482 KMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQ--LEPEHCGSYVLMSNVYGVIGRY 539
Query: 540 EEAWTIFTSMKPE 552
EE + +MK +
Sbjct: 540 EEVLEVRKTMKEQ 552
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 307/594 (51%), Gaps = 47/594 (7%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AIR+ N + +Y+++L+ C G H + + LE D + N+LL
Sbjct: 44 AIRILNST-HSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLL 102
Query: 148 DMYVKCGS---LTRKLFD-QYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVK 194
+Y K G TR++FD + A S W SM+SG +V V
Sbjct: 103 SLYFKLGPDMRETRRVFDGMFVKDAIS-------WTSMMSGYVASKEHVKALEVFVEMVS 155
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G + TL+S + + GE+ G +I FE + S L
Sbjct: 156 FGLQPNKFTLSSAVKACFELGEVRLGRCFHGV-----------VITHGFEWNHVISSTLA 204
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH-SS 313
MY +AR++FD+ +V W +++S + N+ EEA+ L +H
Sbjct: 205 YMYGVNKEPVDARRVFDEMPE------PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 258
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ D TF + L AC NL ++HG ++T+G + +V S+L+D+Y + G+V+
Sbjct: 259 GLVPDGSTFGTVLTACGNLRRLKQ--GKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVR 316
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A ++F+ +P+K++V+WS L+ G ++G + A +FR+M ++ + + +VLK C+
Sbjct: 317 EARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREM----EEKDLYCFGTVLKACA 372
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
LA++R GK++H V+RG I ++LID+Y K G ID ++ M R++++W
Sbjct: 373 GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNA 432
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
++ QNGR +EA+++F +M++ +KP+ I+F+ VL+AC H GLVEE F M Y
Sbjct: 433 MLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSY 492
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN-TKLVSI 612
G++P EHY CM+DLLG+AG F++AE L+ + D ++W +L C + + + +
Sbjct: 493 GIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTDASSIAER 552
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
IA++++ P+ YV+LSN+Y +G K+RK + G K G SWI+
Sbjct: 553 IAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKTVGQSWID 606
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 204/486 (41%), Gaps = 108/486 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEMARKN 68
L+ C + S G H ++K GL D GN+LLS+Y + + ++FD M K+
Sbjct: 67 LQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKD 126
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SWT+M++ Y ++K A+ ++ M+ +G ++PN F S+ +KAC G++ LGR H
Sbjct: 127 AISWTSMMSGYVASKEHVKALEVFVEMVSFG-LQPNKFTLSSAVKACFELGEVRLGRCFH 185
Query: 129 ERITREKLEYDTVLMNTLLDMYV--KCGSLTRKLFDQYSN-----WAA--SAYGN----- 174
+ E++ V+ +TL MY K R++FD+ W A SA+
Sbjct: 186 GVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 245
Query: 175 --VALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ +M G GK++H + G V +SL
Sbjct: 246 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 305
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-----------------------CF- 243
+DMY K G + + +FN MP +++VSW+ ++ G CF
Sbjct: 306 LDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEKDLYCFG 365
Query: 244 ----ECS-------------------CF----TLSALVDMYSNCNVLCEARKLFDQYSSW 276
C+ CF SAL+D+Y + A +++ + S
Sbjct: 366 TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMS-- 423
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LL 333
N+ WN+M+S N + EEA++ + + G+ D +F + L AC + +
Sbjct: 424 ----VRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVE 479
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ FAL + G E Y S +IDL R G + A L R + D W
Sbjct: 480 EGRNYFALMAKSYGIKPGTE-HY---SCMIDLLGRAGLFEEAENLLDRAECRNDASLWGV 535
Query: 393 LIMGCT 398
L+ C
Sbjct: 536 LLGPCA 541
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/691 (27%), Positives = 330/691 (47%), Gaps = 53/691 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + GK +H +I+ + D+F GN L+ Y++ L + +F M +++
Sbjct: 190 LKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDV 249
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT +++AY + A ++ H+++ V+P+ +SA+L + +G++DL E
Sbjct: 250 VSWTALISAYMEEGLXDEAKHIF-HLMQLDGVKPDLISWSALLSGFARNGEIDLALETLE 308
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN--WAASAYGNVALWNSMLSG--- 184
+ L+ N ++ V+ G L L D +S W N+ S+L
Sbjct: 309 EMPERGLQPTVNSWNGIISGCVQNGYLEDAL-DMFSRMLWYPED-PNIITIASILPACTG 366
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
GK +H K G S+IDMY KCG D +F ++ W +
Sbjct: 367 LKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEM 426
Query: 239 IVG--------------------CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
I ++ T + ++ ++ + +A +L +
Sbjct: 427 IAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGL 486
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG------------MCIDSYTFTSAL 326
NV +N +ISG+ + + EA+ + + S M + T T AL
Sbjct: 487 KP--NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 544
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC +L N + ++HG + +G+E + V S L+D+YA+ ++ SA ++F R+ ++
Sbjct: 545 PACADL-NLWCQ-GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRN 602
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V+W+ L+ G + A LF +M+ + + C +A++R G+ +H
Sbjct: 603 TVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHG 662
Query: 447 FCVKRGFEK-EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ K ++ ++ ++LIDMY KCG I D ++F E+DV W +I +G A+
Sbjct: 663 YAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMAR 722
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A A F +M + P+ ITF+ +LSAC GLVEE W F SM+ YG+ LEHY CM
Sbjct: 723 NAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCM 782
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
V +LG AG D+A I +MP+ PD +WA++L+AC H+N ++ A+ L P++
Sbjct: 783 VGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNA 842
Query: 626 SKYVMLSNVYATLGMWDSLSKVRK--AGKKL 654
+ Y++LSN+Y + GMWD +R G+KL
Sbjct: 843 TNYMLLSNIYVSSGMWDFAKNLRSFMRGRKL 873
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 165/708 (23%), Positives = 288/708 (40%), Gaps = 147/708 (20%)
Query: 18 SIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFT-SLNDAHKLFDEMARKNIVSWTTM 75
++ + + +H R++K L GN L+ +Y SL DA KL DE+ + + ++ +
Sbjct: 95 TLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAAL 154
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
+ +Y +++ + + M+ Y + P+ ++ +LKACS +G+++H + R+
Sbjct: 155 IRSYCRSEQWDELFSXFRLMV-YEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKS 213
Query: 136 LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYGNVALWNSMLSGGK 186
+E D + N L+ Y CG L +R +F +W A SAY L + K
Sbjct: 214 VESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDE----AK 269
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGC 242
+ G + + ++ ++L+ + + GEID L MPER V SW GII GC
Sbjct: 270 HIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGC 329
Query: 243 FE------------------------------CSCFTLSAL------------------- 253
+ +C L AL
Sbjct: 330 VQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNV 389
Query: 254 ------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+DMYS C A K+F + + N A+WN MI+ YV + E+A+ LL
Sbjct: 390 YVEGSVIDMYSKCGSYDYAEKVFXKAEN------KNTAMWNEMIAAYVNEGKVEDALGLL 443
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G D T+ + L +A
Sbjct: 444 RSMQKDGWKPDVITYNTILSG-------------------------------------HA 466
Query: 368 RLGNVKSALELFHRLP----KKDVVAWSGLIMGCTKHGLNSLAYLLFR------------ 411
R G A EL + K +VV+++ LI G + GL+ A +FR
Sbjct: 467 RNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPN 526
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+++N + N I+ L C+ L +GK++H + ++ GFE ++L+DMY KC
Sbjct: 527 EVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCH 586
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
++D +F + R+ VSW ++ G N + +EA+ F EM+ L+P+ ITF+ +
Sbjct: 587 DMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFP 646
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEH-----YYCMVDLLGQAGCFDDAEQLIAEMP 586
AC + F Y + L+ ++D+ + G DA+ + +
Sbjct: 647 ACGDIAAIR-----FGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVF-DSE 700
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQ--LLATSPEDPSKYVMLS 632
+ D +W +M+ A H + + Q LL P+ + +LS
Sbjct: 701 VEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLS 748
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/521 (21%), Positives = 203/521 (38%), Gaps = 87/521 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C ++++ GK++H K+G+ +++ +++ MY+ S + A K+F +
Sbjct: 357 IASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAE 416
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN W M+ AY + + A+ L M + G +P+ Y+ +L + +G
Sbjct: 417 NKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDG-WKPDVITYNTILSGHARNGLKTQAX 475
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG-------------------------SLTRKL 160
+ + + L+ + V N L+ + + G +L+ +
Sbjct: 476 ELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRP 535
Query: 161 FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
A A ++ LW GK++H + ++ GFE ++L+DMY KC ++D
Sbjct: 536 NPITITGALPACADLNLW----CQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSA 591
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+F + R+ VSW ++ G
Sbjct: 592 NKVFFRIDGRNTVSWNALMAG--------------------------------------- 612
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
Y+ N+Q EEA+ L + G+ S TF AC ++ RF
Sbjct: 613 -------------YINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAI--RFG 657
Query: 341 LQVHGLIVTSGY-ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+HG EL + S LID+YA+ G++ A +F +KDV W+ +I +
Sbjct: 658 RGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSV 717
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDI 458
HG+ A+ +F M + S+L C+ + G K ++ + G
Sbjct: 718 HGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLE 777
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
T ++ + G +D+ L + MP D W ++ C
Sbjct: 778 HYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQAC 818
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 15/310 (4%)
Query: 305 TLLSHIHSSGMC---IDSYTFTSA--LKACINLLNFNSRFA--LQVHGLIVT-SGYELDY 356
T+ +HIH + +D+ T +S + I+LLN S + Q+H +V + +
Sbjct: 57 TVSNHIHPQTLLPSFVDTLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKS 116
Query: 357 IVGSNLIDLYAR-LGNVKSALELFHRLPKKDVVAWSGLIMG-CTKHGLNSLAYLLFRDMI 414
+G+ L+ LY + +++ A +L +P + V A++ LI C + L + FR M+
Sbjct: 117 SIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDEL-FSXFRLMV 175
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+++++ ++LK CS + R GK VH F +++ E + +LI Y CG++
Sbjct: 176 YEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLG 235
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
++F M ERDVVSWT +I + G EA F M +KP+ I++ +LS
Sbjct: 236 SSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFA 295
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM---PFKPDK 591
G ++ A M PE GL+P + + ++ Q G +DA + + M P P+
Sbjct: 296 RNGEIDLALETLEEM-PERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNI 354
Query: 592 TIWASMLKAC 601
AS+L AC
Sbjct: 355 ITIASILPAC 364
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 326/671 (48%), Gaps = 46/671 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L +C ++ + Q IIK G + ++S++ F S ++A ++F+ + K
Sbjct: 54 LENCTSKKELYQILPF---IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLD 110
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHML--EYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
V + M+ Y N A+ + M+ E V + Y+ +L+ C + DL GR I
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGD---YACLLQLCGENLDLKKGREI 167
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H I E + +M ++ +Y KC R++ + Y + + ++ W ++++G Q
Sbjct: 168 HGLIITNGFESNLFVMTAVMSLYAKC----RQIDNAYKMFERMQHKDLVSWTTLVAGYAQ 223
Query: 188 V-HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----- 241
HA KR + L+ + G+ D + L + +P V + +G
Sbjct: 224 NGHA---KRALQ--------LVLQMQEAGQKPDSVTLVSILPA--VADMKALRIGRSIHG 270
Query: 242 -----CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
FE +AL+DMY C AR +F S V WN+MI G
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRS------KTVVSWNTMIDGCAQ 324
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N ++EEA + G T L AC NL + + VH L+ + +
Sbjct: 325 NGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWF--VHKLLDKLKLDSNV 382
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V ++LI +Y++ V A +F+ L K +V W+ +I+G ++G A LF M +
Sbjct: 383 SVMNSLISMYSKCKRVDIAASIFNNLEKTNVT-WNAMILGYAQNGCVKEALNLFCMMQSQ 441
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
++ F + V+ + + R+ K +H V+ + T+L+DMY KCG I
Sbjct: 442 GIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTA 501
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF M ER V++W +I G G +G KE + F EM + +KPN+ITFL V+SAC H+
Sbjct: 502 RKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHS 561
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G VEE +F SM+ +Y LEP ++HY MVDLLG+AG DDA I EMP KP ++ +
Sbjct: 562 GFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGA 621
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG- 655
ML AC+ H N +L A++L P++ +V+L+N+YA+ MWD ++KVR A + G
Sbjct: 622 MLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGL 681
Query: 656 EKKAGMSWIEV 666
K G SW+E+
Sbjct: 682 HKTPGCSWVEL 692
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 160/448 (35%), Gaps = 123/448 (27%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L ++++ G+S+H + G + N LL MY S A +F M
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K +VSW TM+ N A + ML+ G V P VL AC+ GDL+ G
Sbjct: 309 SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEV-PTRVTMMGVLLACANLGDLERGW 367
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV----ALWNSM 181
+H+ + + KL+ + +MN+L+ MY KC + + AAS + N+ WN+M
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRV---------DIAASIFNNLEKTNVTWNAM 418
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+ G K +H V+
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ T+L+DMY KCG I LF+ M ER V++W +A++D Y
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITW---------------NAMIDGY 523
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
V E LF++ A
Sbjct: 524 GTHGVGKETLDLFNEMQKGAVKP------------------------------------- 546
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGN 371
+ TF S + AC S GL++ + DY + S ++DL R G
Sbjct: 547 NDITFLSVISAC-------SHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQ 599
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTK 399
+ A +P K ++ G ++G K
Sbjct: 600 LDDAWNFIQEMPIKPGISVLGAMLGACK 627
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 311/644 (48%), Gaps = 35/644 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ LR C + +QG+ +H ++ +Q+ N S+YA + + DA ++F +
Sbjct: 314 LTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIP 373
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG------ 119
K+ VSW +V+AY AI L M G V P+ + +L +CS S
Sbjct: 374 CKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFV-PDDITFITILYSCSQSALLKQYG 432
Query: 120 ---DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD---QYSNWAASA 171
L GR +H ++ L+ DT L N L+ MY +CGSL R F Q + ++ +
Sbjct: 433 NSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTI 492
Query: 172 YGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
++ + N S G ++ G E +T SL+ C D L+L + ER
Sbjct: 493 LISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLG---ACSVTGD-LSLGKTIHER- 547
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
I E T +AL++MY+ C L EAR +F++ + +V W +I
Sbjct: 548 ------IRTKGLESDIITSNALLNMYTTCESLDEARLVFERM------VFRDVVSWTIII 595
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S Y EA+ L + D+ T S L+AC +L A +H IV SG
Sbjct: 596 SAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKA--IHERIVASG 653
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E D VG+ ++ Y + V+ A ++F R+ KD+V W+ +I ++ A+ L+
Sbjct: 654 VETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYL 713
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC- 470
+M+ + N + ++L CS + RG +H RG+ + +LI+MY KC
Sbjct: 714 EMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCC 773
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G ++ F+ + ++VVSW+ I+ +NG A F M Q + PN +TF VL
Sbjct: 774 GNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVL 833
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
AC HAGL +E W+ F SM+ ++ LEP EHY CMV+LL ++G A ++ MP +PD
Sbjct: 834 HACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPD 893
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+ W S+L ACE H + + ++ A+QLL P + + YV+L N+
Sbjct: 894 ASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 937
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 186/753 (24%), Positives = 312/753 (41%), Gaps = 117/753 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ A+ C QGK +H RI+ GL + N+L+ MY S+ +A FD M
Sbjct: 13 LLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMP 72
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++SW M+T Y ++ AI+LY + G+ +P+ ++++L AC SGDL GR
Sbjct: 73 ERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGT-KPDEVTFASLLNACFASGDLKFGR 131
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD-----QYSNW-----AASAYG 173
++HE D ++ N L+ MY CGSL +F+ W A + +G
Sbjct: 132 MLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHG 191
Query: 174 NV----ALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
+ A W+ M L GK VH + G +
Sbjct: 192 KLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMEN 251
Query: 206 SLIDMYLKCGE-IDDGLALFNFMPERDVVSWTGII---------VGCFEC---------- 245
SLI MY KC D+ +F + V+SW+ I + FE
Sbjct: 252 SLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNLEGVKPNA 311
Query: 246 --------SCFT-------------------------LSALVDMYSNCNVLCEARKLFDQ 272
+C T L+A +Y+ C+ + +A ++F
Sbjct: 312 TTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSS 371
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN- 331
A + WN+++S Y +AI L + G D TF + L +C
Sbjct: 372 IPCKDAVS------WNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQS 425
Query: 332 --LLNFNSRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L + + +L QVH ++++G + D +G+ L+ +Y R G++ A F + ++
Sbjct: 426 ALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR 485
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
+V +W+ LI ++G S L + M + N+ S+L CS L GK +H
Sbjct: 486 NVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIH 545
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+G E + IT +L++MY C +D+ +F+ M RDVVSWT II G
Sbjct: 546 ERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPL 605
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EA+ ++ M Q +P+ +T + VL AC + E I + G+E + +
Sbjct: 606 EALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVAS-GVETDVFVGTAV 664
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-----CETHNNTKLVSIIAEQLLAT 620
V G+ +DA Q+ + D W +M+ A CE + ++ Q+
Sbjct: 665 VSFYGKCEAVEDARQVFDRI-LDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQM--- 720
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
P D + +L + +T M S R+A +
Sbjct: 721 PPNDVTLITLLDSCSSTCKMERGSSLHREAAAR 753
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 3/291 (1%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ D T +A+ AC L +S Q+H I++SG ++ ++L+ +Y + G+V+
Sbjct: 5 GVPGDEITLLNAVSACAAL--GDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVE 62
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A F R+P++D+++W+ +I +H A L+ ++ +S+L C
Sbjct: 63 EARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACF 122
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L+ G+ +H + F + I LI MY CG +DD A+F++ DV +WT
Sbjct: 123 ASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTT 182
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I ++G+ + A A + +M Q L+ NEITFL VL C ++E + +
Sbjct: 183 VIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVH-RLALGS 241
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
GL+ L ++ + G+ D + + +P W++ + A H
Sbjct: 242 GLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH 292
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 13/232 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ L C R++ +GK++H RI+ G+ D+F G ++S Y ++ DA ++F
Sbjct: 622 DAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVF 681
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K+IV W M+ AY N A LY M+E + PN +L +CS + +
Sbjct: 682 DRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVE-NQMPPNDVTLITLLDSCSSTCKM 740
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
+ G +H T ++N L++MY KC L + + + A NV W+S+
Sbjct: 741 ERGSSLHREAAARGYLSHTSVVNALINMYAKCCG---NLEAAQTAFESVASKNVVSWSSI 797
Query: 182 LSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
++ G++ A + + G VT TS++ G D+G + F
Sbjct: 798 VAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYF 849
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 200/673 (29%), Positives = 345/673 (51%), Gaps = 41/673 (6%)
Query: 7 VEALRHCGQRRSIKQG--KSLHC--RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
V R C RR+++ G H R +GL GN +LSM F A ++F
Sbjct: 92 VALFRLCEWRRAVEPGLRACAHADDRHAWFGLR----LGNAMLSMLVRFGETWHAWRVFA 147
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+M +++ SW MV Y + + A+ LY+ M+ + V P+ + + VL++C D
Sbjct: 148 KMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMM-WAGVRPDVYTFPCVLRSCGGVPDWR 206
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNV 175
+GR +H + R + ++N L+ MY KCG + RK+FD + +W A G+
Sbjct: 207 MGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHF 266
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
N + G ++ + + +T+TS+ ++ + +R +
Sbjct: 267 E--NGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKR---GF 321
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G + C ++L+ MY++ ++ +AR +F + + A W +MISGY
Sbjct: 322 AGDVAFC--------NSLIQMYASLGMMRQARTVFSRMDTRDAMT------WTAMISGYE 367
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N ++A+ + + + + + D T SAL AC L + + +++H L + G+ +
Sbjct: 368 KNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLD--VGVKLHELAESKGF-IS 424
Query: 356 YIVGSN-LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
YIV +N ++++YA+ + A+E+F + +KDVV+WS +I G + N A FR M+
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 484
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
++ N + L C+ +LR GK++HA ++ G E E +LID+Y+KCG+
Sbjct: 485 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
A F +DVVSW +I G +G A+++F +M++ P+E+TF+ +L AC
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
G+V E W +F SM +Y + P+L+HY CMVDLL +AG +A I EMP PD +W
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L C H + +L + A+ +LA P D +V+L ++YA +WD L++VRK ++
Sbjct: 664 GALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREK 723
Query: 655 G-EKKAGMSWIEV 666
G + +G SW+EV
Sbjct: 724 GLDHDSGCSWVEV 736
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 312/648 (48%), Gaps = 34/648 (5%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C RS+ G+ +H +++ G+ D+ G L++MY L A ++F M
Sbjct: 205 VSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPE 264
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+VSW MV + T N AI L+ M+ VEP + VL A + L GR
Sbjct: 265 RNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRR 324
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
IH I +L + N L+ MY +CG + D ++A ++ WN+M+S
Sbjct: 325 IHAMIQERQLLSQIEVANALVTMYGRCGGVG----DAERVFSAMERRDLVSWNAMISAYA 380
Query: 187 Q-------VHAFCVKRG--FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
Q V+ F R + +T +D + ++D G + + E S G
Sbjct: 381 QSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVE----SGFG 436
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+ + S+ S+ + L E + + S AA +V WN+MI+GYV
Sbjct: 437 SCISVANATMHLYSSCSSSSSSSSSLMEV--VAGIFESMAAR---DVISWNTMITGYVQA 491
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ----VHGLIVTSGYE 353
+ A+++ + G+ + TF S L C +SR L+ +H ++ E
Sbjct: 492 GDSFSALSIFKRMLLEGIRGNQVTFMSLLSVC------DSRAFLRQGETIHRRVINQTPE 545
Query: 354 L--DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
L D IV + ++++Y + G + +A LF +++ +W+ +I HG A+ L
Sbjct: 546 LSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSE 605
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M ++ ++L C ++R GK +HA + G EK+ + +L++ Y KCG
Sbjct: 606 RMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCG 665
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+D +LF + RDVVSW GII G NG A+EA+ M Q ++P+ ITFL +LS
Sbjct: 666 NLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILS 725
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
A HAG + + F SM ++ LE +EHY CM+DLLG+AG DAE ++ M + +
Sbjct: 726 ASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKE 785
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
W ++L ACE H + + +A ++ +P+ S YV LSN+YAT G
Sbjct: 786 VSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYATCG 833
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/726 (24%), Positives = 319/726 (43%), Gaps = 108/726 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG +++QG+ +H + ++ + +F GN L++MY +SL++A K+FD M +++
Sbjct: 5 MRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDV 64
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++AY A+ L+ M S++PN + A+L+AC L+ G+ IH
Sbjct: 65 VSWTAMISAYAQTGHQRQALDLFTEM-AGSSLDPNRVTFLALLEACDSPEFLEDGKQIHA 123
Query: 130 RITR-EKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYS-----NWAASAYGN------- 174
R++ + LE D + N ++ MY KC L +F + +W + N
Sbjct: 124 RVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYT 183
Query: 175 --VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
+AL SM LS G+ +HA ++RG E + V T+L+
Sbjct: 184 FTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALV 243
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC---------------------FECSC 247
MY +CG ++ +F+ MPER+VVSW ++ C E +
Sbjct: 244 TMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTR 303
Query: 248 FTLSALVDMYSNCNVLCEARKLF-----------------------------DQYSSWAA 278
+ +++ + L E R++ D ++A
Sbjct: 304 VSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSA 363
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
++ WN+MIS Y + E + L + + + D TF AL AC + + +S
Sbjct: 364 MERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDS- 422
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGN--------VKSALELFHRLPKKDVVAW 390
VH L V SG+ V + + LY+ + ++ +F + +DV++W
Sbjct: 423 -GRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISW 481
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + G + A +F+ M+ NQ S+L VC A LR+G+ +H +
Sbjct: 482 NTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVIN 541
Query: 451 RGFE--KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
+ E + I ++++MY KCGE+D LF+ R++ SW +I +GRA++A
Sbjct: 542 QTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAF 601
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ M + + P+ +TF+ +L+AC G V I + + GLE +V+
Sbjct: 602 DLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARI-IDSGLEKDTVVANALVNF 660
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLK--ACETHNNTKLVSIIAEQLLATSPEDPS 626
+ G D A L + ++ D W ++ A H L S+ Q P+ +
Sbjct: 661 YSKCGNLDTATSLFGALDYR-DVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAIT 719
Query: 627 KYVMLS 632
+LS
Sbjct: 720 FLTILS 725
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 207/469 (44%), Gaps = 98/469 (20%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
Y+ +++AC +SG L+ GR +H + R + N L++MY +C SL RK+FD+
Sbjct: 1 YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60
Query: 166 -----NWAA--SAYGNVA-------LWNSM------------------------LSGGKQ 187
+W A SAY L+ M L GKQ
Sbjct: 61 ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120
Query: 188 VHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+HA + DV + +++ MY KC D +A+F+ M ERD++SW I E
Sbjct: 121 IHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESG 180
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+T + + L
Sbjct: 181 DYTFT----------------------------------------------------LAL 188
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + GM D TF SAL ACI + N R +H L++ G E D ++G+ L+ +
Sbjct: 189 LKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRL---IHALVLERGMEGDVVLGTALVTM 245
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFI 424
Y R G ++SA E+FHR+P+++VV+W+ ++ CT + + A LF+ M+ + + +
Sbjct: 246 YGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVS 305
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+VL + +L G+++HA +R + +L+ MY +CG + D +F M
Sbjct: 306 FITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAME 365
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
RD+VSW +I Q+G A+E + F M R+ P+ ITFL L AC
Sbjct: 366 RRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDAC 414
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 15/402 (3%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
S F + LV+MY C+ L EARK+FD+ +V W +MIS Y +A+
Sbjct: 32 SLFFGNRLVNMYRRCSSLDEARKVFDRMRER------DVVSWTAMISAYAQTGHQRQALD 85
Query: 306 LLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
L + + S + + TF + L+AC L + +V L + E D V + ++
Sbjct: 86 LFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQL---LESDVPVANAVM 142
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+Y + A+ +F + ++D+++W+ I + G + L + M ++
Sbjct: 143 GMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKV 202
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
S L C SL G+ +HA ++RG E + + T+L+ MY +CG ++ +F M
Sbjct: 203 TFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRM 262
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEA 542
PER+VVSW ++ C N EAI F+ M+ + ++P ++F+ VL+A + E
Sbjct: 263 PERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEG 322
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-C 601
I +M E L +E +V + G+ G DAE++ + M + D W +M+ A
Sbjct: 323 RRIH-AMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAME-RRDLVSWNAMISAYA 380
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
++ ++V++ P D ++M + A + DS
Sbjct: 381 QSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDS 422
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+ +++ C +L +G++VH + ++ L++MY +C +D+ +F M E
Sbjct: 2 ARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE 61
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
RDVVSWT +I Q G ++A+ F EM S L PN +TFL +L AC +E+ I
Sbjct: 62 RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-CETH 604
+ LE + ++ + + D A + +EM + D W + + A E+
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMR-ERDLISWNNAIAANAESG 180
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ T ++++ L P K +S + A +G
Sbjct: 181 DYTFTLALLKSMQLEGMA--PDKVTFVSALNACIG 213
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 206/723 (28%), Positives = 331/723 (45%), Gaps = 98/723 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ AL C +++ GK +H I + G D+ N L+SMY S++DA ++FD M
Sbjct: 104 LLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMP 163
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+++WT M+ A+ A +++ ++E + N Y +++ACS L++G
Sbjct: 164 ARNVITWTAMIGAHAETSLEQ-AFKVFR-LMELEGFKSNFVTYVTLVQACSKPEFLEVGI 221
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--SAYGN-- 174
++H R +T L N L+ MY +CG L R +F W A + YG
Sbjct: 222 ILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHG 281
Query: 175 -----VALWNSMLSGG------------------------KQVHAFCVKRGFEKEDVTLT 205
V L+ ML G K VH+ V+ G T
Sbjct: 282 HVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGT 341
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL-------VDMYS 258
+L+ MY KC ++D LF MP+R+V+SW ++V + A+ +D
Sbjct: 342 ALVAMYSKCESLEDTRWLFEKMPQRNVISWN-VMVTAYAKHGLGRKAVQITEYMQLDGVK 400
Query: 259 NCNVLCEA----------RKLFDQYSSWAASA---------------YG----------- 282
NV C KL + W A YG
Sbjct: 401 PDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMV 460
Query: 283 -------NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
NV W +M++ Y + + A+ L IH SG+ TF AL AC+
Sbjct: 461 FDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEAL 520
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLI 394
VH V SG + D +GS L+ +Y R G+++ A F +K+ V WS +I
Sbjct: 521 GK--GRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMI 578
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+HG + R M D++ +S L CS LA LR GK++H++ +R F+
Sbjct: 579 AAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFD 638
Query: 455 KEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
E T+T SL+ MY KCG +D +F+ +D++ W II G Q+G+ ++A+ F
Sbjct: 639 TEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHR 698
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M Q + P+ +TF+ +LS C H GL++E + SM E GLEP ++Y C++DLLG+AG
Sbjct: 699 MQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELGLEPTQDNYACVIDLLGRAG 757
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
+AE+ I + +P S+L +C++H + + AE ++ P S +V+LS+
Sbjct: 758 KLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSS 817
Query: 634 VYA 636
+Y+
Sbjct: 818 IYS 820
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 179/738 (24%), Positives = 309/738 (41%), Gaps = 118/738 (15%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L+ C + +++ + LH +I++ L +F GN+L+ Y SL+DA + F+ M+
Sbjct: 4 VRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 63
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
KN+ +WT ++ + + AI L ML G V+P+ A L +C S L G+L
Sbjct: 64 KNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEG-VKPDNITLLAALTSCETSQALPAGKL 122
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH I + + D +L N L+ MY CGS+ +++FD A NV W +M+
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFD------AMPARNVITWTAMIGA 176
Query: 185 GKQV---HAFCVKR-----GFEKEDVTLTS------------------------------ 206
+ AF V R GF+ VT +
Sbjct: 177 HAETSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMET 236
Query: 207 -----LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV--------------------- 240
LI MY +CG ++D A+F+ M ERD+++W +I
Sbjct: 237 PLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQE 296
Query: 241 GCFE-----CSCFTLS----ALVD-------------------------MYSNCNVLCEA 266
GC + T+S AL D MYS C L +
Sbjct: 297 GCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDT 356
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
R LF++ NV WN M++ Y + +A+ + ++ G+ D+ T L
Sbjct: 357 RWLFEKMPQR------NVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLL 410
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
C + + +VHG I E D I+ ++L+++Y R G V+ A +F + +++
Sbjct: 411 NVCTGSADL--KLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRN 468
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V++W+ ++ ++ +A LLF + S L C +L +G+ VH+
Sbjct: 469 VISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHS 528
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAK 505
V+ G + + ++L+ MY +CG I D A F R + V+W+ +I Q+G+ +
Sbjct: 529 CAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDR 588
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
E + + + M Q L + TF LSAC + + E I + ++ +
Sbjct: 589 EGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSL 648
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK-LVSIIAEQLLATSPED 624
V + G+ G D A ++ E + D W +++ H T+ V + D
Sbjct: 649 VTMYGKCGSLDCAREVF-ETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPD 707
Query: 625 PSKYVMLSNVYATLGMWD 642
P +V + +V + G+ D
Sbjct: 708 PVTFVCILSVCSHGGLLD 725
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 234/518 (45%), Gaps = 49/518 (9%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
Y +L+AC LD+ R +H +I R L+ L N L+ Y KC SL D + +
Sbjct: 3 YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLD----DAWETF 58
Query: 168 AASAYGNVALWNSMLSGGKQVHAFC-----------VKRGFEKEDVTLTSLI-----DMY 211
+Y NV W +++ G H C + G + +++TL + +
Sbjct: 59 ERMSYKNVYTWTAII--GVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQA 116
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
L G++ GL ++ +G +C +ALV MY +C + +A+++FD
Sbjct: 117 LPAGKLIHGL-----------IAQSG-----HQCDLILENALVSMYGSCGSVDDAKRVFD 160
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
A NV W +MI + E+A + + G + T+ + ++AC
Sbjct: 161 ------AMPARNVITWTAMIGAHA-ETSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSK 213
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ +H V S ++ + + LI +Y R G ++ A +F + ++D++AW+
Sbjct: 214 PEFLE--VGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWN 271
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI +HG A LL++ M+ ++ ++L + + +L K VH+ V+
Sbjct: 272 ALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVES 331
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G T+L+ MY KC ++D LF+ MP+R+V+SW ++ ++G ++A+
Sbjct: 332 GVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQIT 391
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+ M +KP+ +T +G+L+ C + ++ + + E E L + ++++ G+
Sbjct: 392 EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWI-AEGRCEADLILWNSLLNMYGR 450
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
G + AE ++ + + + W +ML A N +
Sbjct: 451 CGEVEQAE-MVFDGILQRNVISWTAMLTAYSRQNRQDM 487
>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 323/656 (49%), Gaps = 35/656 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C GK +H IK+G + G++L+ +Y+ F S DA KLF M +
Sbjct: 127 LRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDT 186
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWTT++ + + + A+R+Y MLE V N F + +L A S G L G+LIH
Sbjct: 187 VSWTTVIASCVQAGKCSHALRIYMEMLE-AQVSSNEFTFVRLLAASSFIG-LQYGKLIHA 244
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-- 187
++ + VL L++MY +C +++ D + +V LW +++SG Q
Sbjct: 245 HAIVLGVKLNLVLKTALVNMYSRC----QRIEDAIKVSKLTPEYDVILWTAIISGLAQNM 300
Query: 188 -----VHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
V AF G + T S++ + + +D G + + +I
Sbjct: 301 KFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIH-----------SRVIR 349
Query: 241 GCFECSCFTLSALVDMYSNCNVLCE-ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
E +ALVDMY C+ + E ++F S NV W S+I+G+ +
Sbjct: 350 TGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKS------PNVISWTSLIAGFAEHGF 403
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
++++ L + + G+ +S+T + L+ C + + L++HG I+ + + D +VG
Sbjct: 404 QQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQ--TLKLHGHIIKTKADYDVVVG 461
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+D YA G V A + + ++D + ++ L + G + LA + M N++
Sbjct: 462 NALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVK 521
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ F ++ + L + GKQ+H + +K G LID+Y K G + +
Sbjct: 522 IDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRA 581
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F + E DVVSW G+I G NG A++ F +M ++P+ ITFL VLS C H GLV
Sbjct: 582 FTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLV 641
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ F SM+ + +EP +HY C+VD+LG+AG ++A +I MP +PD +I+ ++L
Sbjct: 642 DMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLA 701
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
AC H N L +A + L +P DP+ +++L +Y G +D K R++ K+ G
Sbjct: 702 ACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDCGRYDLGEKTRRSIKQKG 757
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/660 (24%), Positives = 292/660 (44%), Gaps = 101/660 (15%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+S+K+G +H IIK GL ++ NNLLS+Y+ S+ A + FDEM +++VSWT ++
Sbjct: 33 KSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGIL 92
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+A+ N+R A+ +++ M+ G PN F +S++L++C GD G+ IH +
Sbjct: 93 SAHIKNERHEEALDIFDFMVLSGPY-PNAFTFSSILRSCFALGDFSYGKRIHASSIKHGF 151
Query: 137 EYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVA--------------LWNS 180
E + +L ++L+D+Y + S KLF + ++ V ++
Sbjct: 152 ESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYME 211
Query: 181 MLSG-----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
ML GK +HA + G + V T+L++MY +C I
Sbjct: 212 MLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRI 271
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
+D + + PE DV+ WT II G +
Sbjct: 272 EDAIKVSKLTPEYDVILWTAIISGLAQ--------------------------------- 298
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
N + +EA+ + SG+ ++T+ S L CI++L+ +
Sbjct: 299 -------------------NMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLD- 338
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAWSGLIMG 396
Q+H ++ +G E D VG+ L+D+Y + V+ L +F + +V++W+ LI G
Sbjct: 339 -LGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAG 397
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+HG + LF +M N F +S VL+VCS + S + ++H +K + +
Sbjct: 398 FAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYD 457
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ +L+D Y G +DD + K M +RD +++T + Q G + A++ M
Sbjct: 458 VVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFN 517
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ +K + + SA G +E + S+K GL L ++DL G+ G
Sbjct: 518 ADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKS--GLSCCLSVANGLIDLYGKYGLV 575
Query: 576 DDAEQLIAEMPFKPDKTIWASMLK--ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
+A + E+ +PD W ++ A H ++ L + +L P+ + ++LS
Sbjct: 576 HEARRAFTEIT-EPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLST 634
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 323/652 (49%), Gaps = 48/652 (7%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V A+ C S++QG LH R++ + D GN LL+ YA ++++ LF M
Sbjct: 211 VAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKV 270
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---DLDL 123
KN+V+W+ +V AY N A+ L+ ML G V PN + ++L +CS +G DL
Sbjct: 271 KNVVTWSAIVAAYAQNGHHEPAVELFREMLLDG-VAPNKVTFVSLLFSCSHAGLIKDLAR 329
Query: 124 GRLIHERITREKLEY-DTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNS 180
GR IH I + D V+ L++MY +CGS++ + +FD+ + N+ WN+
Sbjct: 330 GRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQ------HRNITSWNA 383
Query: 181 MLS----GGKQVHAFCVKR-------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
ML + + A R G + + +T S D G++ + + + + +
Sbjct: 384 MLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQ 443
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ T +++G SAL+ MY NC L +A ++ DQ NV W S
Sbjct: 444 SWPSNQTDVVLG---------SALIKMYGNCRRLADAAQVLDQMPR------TNVISWTS 488
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI NE NE AI + + G D T + +KA NL + + ++ H
Sbjct: 489 MILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDL--KRGIEFHAQAAA 546
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK---DVVAWSGLIMGCTKHGLNSLA 406
G+ +VG+ L+ LY G++++A +F L ++ DVV W+ ++ ++GL + A
Sbjct: 547 FGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQA 606
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGFEKEDITLTSLID 465
F+ M++ + ++ ++L C+ S L +G ++HA G + + +L+
Sbjct: 607 LGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLH 666
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY +CG + +F + +++VVSW+ + C NG A A+ F+ M+ ++PN +T
Sbjct: 667 MYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVT 726
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+ +LS C H GL++EA + +M ++ L+P ++HY C++DLL +AG F AE+L +
Sbjct: 727 FISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHL 786
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
P+ W S+L AC H + + + A+ P D + YV LSN +T
Sbjct: 787 ---PNPVAWNSLLGACLVHGDAETAARAADTAAKLQPLDCAPYVSLSNAMST 835
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/606 (25%), Positives = 290/606 (47%), Gaps = 34/606 (5%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
G +++ G+++H ++I G +D + N L+ MY S++DA +F ++RKN+ +WT
Sbjct: 6 GDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWT 65
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG--DLDLGRLIHERI 131
++ A+T N A+ L+ M +G V+ + F +SA+L+ACS G L LG+ IH RI
Sbjct: 66 ILIVAHTHNGLFFEAVELFREMDVHG-VQSDEFTFSAILEACSNLGLAFLSLGKTIHSRI 124
Query: 132 TREKLEY---DTVLMNT-LLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGG 185
++ L+ TV+ +T ++D Y + G + + ++F++ ++ W +M++
Sbjct: 125 HQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDP--DLIAWTAMMTAY 182
Query: 186 KQV-HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
Q+ HA F K D+ D + ID ++ + E+ V + ++ E
Sbjct: 183 NQLGHAREALLLFRKMDLQGLE-PDRFAFVAAIDACSSIPSL--EQGTVLHSRLLASSVE 239
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
C +AL++ Y+ ++ E+R LF NV W+++++ Y N +E A+
Sbjct: 240 CDGVVGNALLNFYAKAGLVHESRSLFSSMK------VKNVVTWSAIVAAYAQNGHHEPAV 293
Query: 305 TLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN 361
L + G+ + TF S L +C L+ +R ++H I+ S D +V +
Sbjct: 294 ELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLAR-GRKIHAEILKSTAAAGDVVVATA 352
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+++Y R G+V A +F + +++ +W+ +++ + + + A FR M+ + V
Sbjct: 353 LVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVK 412
Query: 422 QFIIS--SVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITL-TSLIDMYLKCGEIDDGL 477
I+ S C + L R ++H+ + + D+ L ++LI MY C + D
Sbjct: 413 PDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAA 472
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+ MP +V+SWT +I+ C QN + AI ++ M KP+ +T + V+ A A
Sbjct: 473 QVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAA--AN 530
Query: 538 LVEEAWTI-FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP--DKTIW 594
L + I F + +G +V L G +G AE + E+ + D W
Sbjct: 531 LHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTW 590
Query: 595 ASMLKA 600
SML A
Sbjct: 591 NSMLSA 596
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 243/543 (44%), Gaps = 36/543 (6%)
Query: 117 LSGD---LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
L GD LD GR +H ++ D L N L+ MY +C R + D + + +
Sbjct: 4 LHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRC----RSVHDAIAVFHTVSRK 59
Query: 174 NVALWNSMLSGGKQVHAFCVK---------RGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
NV W ++ F G + ++ T +++++ C + GLA
Sbjct: 60 NVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILE---ACSNL--GLAFL 114
Query: 225 NFMPE-RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+ + G+ + + +A++D Y+ + +A ++F++ +
Sbjct: 115 SLGKTIHSRIHQQGLKLTS-NPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDP--D 171
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ W +M++ Y EA+ L + G+ D + F +A+ AC ++ + L
Sbjct: 172 LIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVL-- 229
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H ++ S E D +VG+ L++ YA+ G V + LF + K+VV WS ++ ++G +
Sbjct: 230 HSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHH 289
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCS---CLASLRRGKQVHAFCVKRGFEKEDITL 460
A LFR+M+ N+ S+L CS + L RG+++HA +K D+ +
Sbjct: 290 EPAVELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVV 349
Query: 461 -TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI--QS 517
T+L++MY +CG + D +F M R++ SW ++V N R+ EA+ +F+ M+
Sbjct: 350 ATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGE 409
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY-GLEPHLEHYYCMVDLLGQAGCFD 576
+KP+ ITF+ AC G + A I + + + + + ++ + G
Sbjct: 410 GVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLA 469
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
DA Q++ +MP + + W SM+ ACE + +N + + L DP V +
Sbjct: 470 DAAQVLDQMP-RTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAA 528
Query: 636 ATL 638
A L
Sbjct: 529 ANL 531
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 13/337 (3%)
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
VH ++TSGY D + + LI +Y R +V A+ +FH + +K+V W+ LI+ T +GL
Sbjct: 17 VHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVAHTHNGL 76
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCS--CLASLRRGKQVHAFCVKRGFEKED--- 457
A LFR+M ++F S++L+ CS LA L GK +H+ ++G +
Sbjct: 77 FFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPT 136
Query: 458 -ITLTSLIDMYLKCGEIDDGLALFKFMP----ERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
I T++ID Y + G I+ +F+ M + D+++WT ++ Q G A+EA+ F+
Sbjct: 137 VICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFR 196
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M L+P+ F+ + AC +E+ T+ S +E +++ +A
Sbjct: 197 KMDLQGLEPDRFAFVAAIDACSSIPSLEQG-TVLHSRLLASSVECDGVVGNALLNFYAKA 255
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
G ++ L + M K + W++++ A + ++ V + E LL + +V L
Sbjct: 256 GLVHESRSLFSSMKVK-NVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSL 314
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVSS 668
+ G+ L++ RK ++ + A + V++
Sbjct: 315 LFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVAT 351
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 52/289 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V ++ +K+G H + +G + GN L+++Y L A +F
Sbjct: 517 DPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVF 576
Query: 62 DEMARK---NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
E+ ++ ++V+W +M++A+ N PN A+ + ML +G P+ + +L AC +
Sbjct: 577 KELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGR-HPDKTTFVNILNAC--A 633
Query: 119 GD---LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS-----NWA 168
GD L G IH L+ D + NTLL MY +CG+L+ RK+F + +W+
Sbjct: 634 GDPSKLLQGVKIHALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWS 693
Query: 169 A---------SAYGNVALWNSMLSGGKQVHAF--------CVKRGFEKEDVT-------- 203
A A G + + ML GG Q +A C G E V+
Sbjct: 694 AMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSD 753
Query: 204 ---------LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
L+D+ + G+ L +P + V+W ++ C
Sbjct: 754 HNLKPTVQHYACLLDLLARAGKFHRAEELATHLP--NPVAWNSLLGACL 800
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+LK+ +L G+ VH + G+ ++ LI MY +C + D +A+F + ++
Sbjct: 1 MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL--VEEAWTI 545
V +WT +IV NG EA+ F+EM ++ +E TF +L AC + GL + TI
Sbjct: 61 VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120
Query: 546 FTSMKPEYGLE----PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK---PDKTIWASML 598
+ + + GL+ P + M+D Q G + A ++ M + PD W +M+
Sbjct: 121 HSRIH-QQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMM 179
Query: 599 KA 600
A
Sbjct: 180 TA 181
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 227/770 (29%), Positives = 349/770 (45%), Gaps = 120/770 (15%)
Query: 6 IVEALRHCGQRRSIKQ--GKSLHCRIIKYGLSQDIFTGNNLLSMYAD-FTSLNDAHKLFD 62
V LR C + S+ G+ +H + K + D N L+SMY S+ A F
Sbjct: 105 FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMY-SAVLKACSLS-GD 120
++ KN VSW ++++ Y+ A R+++ M +Y P + + S V ACSL+ D
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPD 223
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY-------------- 164
+ L I I + L D + + L+ + K GSL+ RK+F+Q
Sbjct: 224 VRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG 283
Query: 165 ---SNWAASAYGNVALWNSM-------------------------LSGGKQVHAFCVKRG 196
W A NSM L G++VH + G
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 197 FEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC-------- 247
V + L++MY KCG I D +F FM ++D VSW +I G + C
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 248 ------------FTL-----------------------------------SALVDMYSNC 260
FTL +AL+ +Y+
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCIDS 319
L E RK+F + + V+ WNS+I +E++ EA+ + +G ++
Sbjct: 464 GYLNECRKIFS-----SMPEHDQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
TF+S L A Q+HGL + + + + LI Y + G + ++F
Sbjct: 518 ITFSSVLSA--VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF 575
Query: 380 HRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
R+ ++D V W+ +I G + L + A L M+ + Q ++ F+ ++VL + +A+L
Sbjct: 576 SRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 635
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
RG +VHA V+ E + + ++L+DMY KCG +D L F MP R+ SW +I G
Sbjct: 636 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 499 GQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
++G+ +EA+ F+ M + + P+ +TF+GVLSAC HAGL+EE + F SM YGL P
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 755
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK--LVSIIAE 615
+EH+ CM D+LG+AG D E I +MP KP+ IW ++L AC N K L AE
Sbjct: 756 RIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAE 815
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
L PE+ YV+L N+YA G W+ L K RK K KK AG SW+
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 273/597 (45%), Gaps = 51/597 (8%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H R+ K L +D++ NNL++ Y + A K+FDEM +N VSW +V+ Y+ N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--GRLIHERITREKLEYDTVL 142
A+ M++ G + N + + +VL+AC G + + GR IH + + D V+
Sbjct: 83 HKEALVFLRDMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 143 MNTLLDMYVKC-GSLTRKLFDQYSNWAASAYGNVAL-----WNSMLS----GGKQVHAFC 192
N L+ MY KC GS+ +A A+G++ + WNS++S G Q AF
Sbjct: 142 SNVLISMYWKCIGSV---------GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 193 V-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+ G + T SL+ E D L L M + +G++
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL-LEQIMC---TIQKSGLLT-----DL 243
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F S LV ++ L ARK+F+Q + N N ++ G V + EEA L
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETR------NAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 308 SHIHSS-GMCIDSYT-FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLI 363
++S + +SY S+ + +VHG ++T+G +D++VG + L+
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLV 356
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
++YA+ G++ A +F+ + KD V+W+ +I G ++G A ++ M + F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ S L C+ L + G+Q+H +K G + +L+ +Y + G +++ +F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 484 PERDVVSWTGIIVGCGQNGRA-KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
PE D VSW II ++ R+ EA+ F ++ K N ITF VLSA E
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 543 WTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I ++K E E+ ++ G+ G D E++ + M + D W SM+
Sbjct: 537 KQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
V SC+ + H+ K +K+ +LI+ YL+ G+ +F MP R+ VS
Sbjct: 10 VQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVS 69
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
W I+ G +NG KEA+ + ++M++ + N+ F+ VL AC+ G V
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/707 (27%), Positives = 324/707 (45%), Gaps = 99/707 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + C G SLH ++ GLS D + G++L+S YA F ++ K+
Sbjct: 47 LDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKV 106
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++N+V WTT++ +Y+ + A ++ M E G ++P ++L S
Sbjct: 107 FDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESG-IQPTSVTLLSLLPGIS---K 162
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASA 171
L L +H I E D L N++++MY KCG + R+LF N SA
Sbjct: 163 LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSA 222
Query: 172 YGNV---------------------------ALWNSMLSG----GKQVHAFCVKRGFEKE 200
Y + AL S + G GK VH +K G +
Sbjct: 223 YSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNID 282
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
++L+ +YL+C +D +F E+DVV WT +I G + C
Sbjct: 283 QHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDC------------- 329
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
++A+ + + S + +
Sbjct: 330 ---------------------------------------ADKALGVFYQMIESNVKPSTA 350
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T S L AC L + +HG ++ G LD ++L+ +YA+ ++ + +F+
Sbjct: 351 TLASGLAACAQLGCCD--IGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFN 408
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
++ +KD+V+W+ ++ G K+G S F +M S + ++S+L+ C +L +
Sbjct: 409 KMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQ 468
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK +H F ++ +T T+L+DMY KCG +++ F M +RD+V+W+ +IVG G
Sbjct: 469 GKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG+ + A+ + E + + ++PN + F+ VLSAC H GL+ + +I+ SM ++ + P+LE
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLE 588
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H C+VDLL +AG D+A M +P + +L AC + +L +IA +
Sbjct: 589 HRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFEL 648
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
P DP +V L+N YA++ WD + K + LG KK G S IEV
Sbjct: 649 KPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEV 695
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 9/320 (2%)
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
A+G +NS++S + + + + + +D+YTF S KAC NL F+
Sbjct: 10 AHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSH-- 67
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
L +H +V +G D +GS+LI YA+ G + ++F + K++VV W+ +I ++
Sbjct: 68 GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSR 127
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G +A+ +F+ M S + S+L ++ L +H + GFE +
Sbjct: 128 EGDIDIAFSMFKQMRESGIQPTSVTLLSLLP---GISKLPLLLCLHCLIILHGFESDLAL 184
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
S+++MY KCG I D LF+ + RD+VSW ++ + G +E + Q M +
Sbjct: 185 SNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDI 244
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
KP++ TF LSA G + + M K ++ H+E +V L + C D A
Sbjct: 245 KPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVES--ALVVLYLRCRCLDPA 302
Query: 579 EQLIAEMPFKPDKTIWASML 598
++ K D +W +M+
Sbjct: 303 YKVFKSTTEK-DVVMWTAMI 321
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 23/256 (8%)
Query: 396 GCTKHGLNSLAYLL------------FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
GCTK NSL L + M ++ ++ + S+ K C+ L G
Sbjct: 12 GCTK-SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLS 70
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H V G + +SLI Y K G I G +F M +R+VV WT II + G
Sbjct: 71 LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGD 130
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
A + F++M +S ++P +T L +L + +G E L
Sbjct: 131 IDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL----PLLLCLHCLIILHGFESDLALSN 186
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
MV++ G+ G DA +L + + D W S+L A ++ I + L A E
Sbjct: 187 SMVNMYGKCGRIADARRLFQSIDCR-DIVSWNSLLSA---YSKIGATEEILQLLQAMKIE 242
Query: 624 D--PSKYVMLSNVYAT 637
D P K S + A+
Sbjct: 243 DIKPDKQTFCSALSAS 258
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 298/571 (52%), Gaps = 39/571 (6%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFD 162
P+ ++ +VLK+C+L DL G +H I R + +D N L++MY K SL
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67
Query: 163 QYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
++ + + ML G + +E ++ D L C E+D+ +A
Sbjct: 68 RFCD------------SKMLGGIPE----------PREIGKCSNSHD--LPC-ELDERVA 102
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN----VLCEARKLFDQYSSWAA 278
+ + + +S V ++ F D+YS L RK+F+
Sbjct: 103 GIDQNGDLNQMSNILYQVNTYK-KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK--- 158
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
++ WN++ISG N +E+A+ ++ + ++ + DS+T +S L +N
Sbjct: 159 ---RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK- 214
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
++HG + +GY+ D +GS+LID+YA+ V + +F+ LP+ D ++W+ +I GC
Sbjct: 215 -GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 273
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G+ F+ M+ + N SS++ C+ L +L GKQ+H + ++ F+
Sbjct: 274 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 333
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
++L+DMY KCG I +F M D+VSWT +I+G +G A +AI+ F+ M
Sbjct: 334 IASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEG 393
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+KPN + F+ VL+AC HAGLV+EAW F SM +Y + P LEHY + DLLG+ G ++A
Sbjct: 394 VKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEA 453
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
+ I++M +P ++W+++L AC H N +L ++++L P++ YV+LSN+Y+
Sbjct: 454 YEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAA 513
Query: 639 GMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
G W K+R A + G +KK SWIE+ +
Sbjct: 514 GRWKDARKLRIAMRDKGMKKKPACSWIEIKN 544
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 134/607 (22%), Positives = 244/607 (40%), Gaps = 128/607 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDA--HKLFDEMARK 67
L+ C + ++ G+S+H II+ G+ D++T N L++MY+ F SL + + D
Sbjct: 17 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKMLG 76
Query: 68 NIVSWTTMVTAYTSNKRPN----------------------WAIRLYNHMLEYGSVEPNG 105
I + S+ P + + Y + + G
Sbjct: 77 GIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSD-- 134
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERIT-REKLEYDTVLM-NTLLDMYVKCGSLTRKL--- 160
+YS K G L R + E + R+ + ++TV+ N M+ + R++
Sbjct: 135 -VYSKKEKESYYLGSL---RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNA 190
Query: 161 -FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
S +S A + ++L G K++H + ++ G++ + +SLIDMY KC +DD
Sbjct: 191 DLRPDSFTLSSVLPIFAEYVNLLKG-KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDD 249
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
+F +P+ D +SW II GC + F E K F Q
Sbjct: 250 SCRVFYMLPQHDGISWNSIIAGCVQNGMFD---------------EGLKFFQQ------- 287
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
L++ I + + +F+S + AC +L +
Sbjct: 288 -------------------------MLIAKIKPNHV-----SFSSIMPACAHLTTLH--L 315
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q+HG I+ S ++ + + S L+D+YA+ GN+++A +F ++ D+V+W+ +IMG
Sbjct: 316 GKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL 375
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
HG A LF+ M N +VL CS HA V ++
Sbjct: 376 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS-----------HAGLVDEAWK----- 419
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
Y D ++ +P + + + G+ GR +EA + +M +
Sbjct: 420 -------YFNSMTQD-----YRIIPGLE--HYAAVADLLGRVGRLEEAYEFISDM---HI 462
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH-LEHYYCMVDLLGQAGCFDDA 578
+P + +L+ACR +E A + K + ++P + Y + ++ AG + DA
Sbjct: 463 EPTGSVWSTLLAACRVHKNIELAEKV---SKKLFTVDPQNIGAYVLLSNIYSAAGRWKDA 519
Query: 579 EQLIAEM 585
+L M
Sbjct: 520 RKLRIAM 526
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/692 (28%), Positives = 317/692 (45%), Gaps = 97/692 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL+ C ++ QG+ +H + K GL +IF N+L+S Y +++A LFD +
Sbjct: 55 LVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCS 114
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG-----D 120
+ VS M+ Y + + A L+ M G V + C L D
Sbjct: 115 VLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKD 174
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ +I +T + +++ Y G +
Sbjct: 175 MRFAGVIPNEVT----------LASVISAYSHVGGILN---------------------- 202
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
+ +HA K G E ++ T+L+ MY C + + LF+ +PER+VV+W ++
Sbjct: 203 ----CRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLN 258
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G ++ S LVD+ AR LF++ + +V W ++I GYV E+
Sbjct: 259 G------YSKSGLVDL---------ARDLFERIPA------KDVVSWGTIIDGYVQIERL 297
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE------- 353
EA+ + + +G+ + + AC + + Q HG+IV +G++
Sbjct: 298 GEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSE--GQQFHGIIVRTGFDCYDFIQA 355
Query: 354 ----------------LDYIVGSN--------LIDLYARLGNVKSALELFHRLPKKDVVA 389
L + +GS LI + R G ++ A +LF +P++DV +
Sbjct: 356 TIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFS 415
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
WS +I G +++ LA LF +M+ N+ + SV + L +L G+ H + +
Sbjct: 416 WSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYIL 475
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER--DVVSWTGIIVGCGQNGRAKEA 507
D +LIDMY KCG I L LF + +R V W II G +G A +
Sbjct: 476 SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVS 535
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F ++ + R+KPN ITF+GVLSAC HAGLV+ F MK Y +EP+++HY CM+D
Sbjct: 536 LKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMID 595
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG +A ++I +MP K D IW ++L AC TH N ++ AE L +
Sbjct: 596 LLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAG 655
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA 659
V+LSN+YA G WD VR+A + KK+
Sbjct: 656 RVLLSNIYADAGRWDDAFLVRRAMQSQRMKKS 687
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 206/550 (37%), Gaps = 133/550 (24%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L ++ A H G I + LH K GL NL+ MY +SL +A LFD
Sbjct: 187 LASVISAYSHVG---GILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFD 243
Query: 63 EMARKNIVSWTTMVTAYTSN-------------------------------KRPNWAIRL 91
E+ +N+V+W M+ Y+ + +R A+R+
Sbjct: 244 EIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRM 303
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
Y ML G V PN M ++ AC + + G+ H I R + + T++ Y
Sbjct: 304 YRSMLRTG-VGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYA 362
Query: 152 KCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
CG + + + +V+ WN+++SG +
Sbjct: 363 ACGEINLAFLQ----FELGSKDHVSSWNALISG--------------------------F 392
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
++ G I+ LF+ MPERDV SW+ +I G
Sbjct: 393 VRNGMIEQARQLFDEMPERDVFSWSSMISG------------------------------ 422
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
Y NEQ + A+ L + + G+ + T S A
Sbjct: 423 ----------------------YSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIAT 460
Query: 332 LLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK--DVV 388
L R+A H I+++ L+ + + LID+YA+ G++ AL+LF+ + + V
Sbjct: 461 LGTLMEGRWA---HEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVS 517
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
W+ +I G HG +++ LF + N VL C C A L + +
Sbjct: 518 PWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSAC-CHAGLVDTGEKYFKG 576
Query: 449 VKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNG--- 502
+K E +ID+ + G + + + + MP + DVV W ++ C +G
Sbjct: 577 MKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVE 636
Query: 503 ---RAKEAIA 509
RA E +A
Sbjct: 637 IGERAAENLA 646
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 410 FRDMINSNQDVN----QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
R N N+D + + S LK CS L +L +G+Q+H+ K G SLI
Sbjct: 36 LRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLIS 95
Query: 466 MYLKC-------------------------------GEIDDGLALFKFMPERDVVSWTGI 494
Y+KC G +D+ LF+ MP + VS+T +
Sbjct: 96 FYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTM 155
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
++G QN EAI F++M + + PNE+T V+SA H G + + ++ + G
Sbjct: 156 VMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNC-RMLHALSFKLG 214
Query: 555 LEP------HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
LE +L H YC+ LG +A L E+P + + W ML
Sbjct: 215 LEALNIVATNLVHMYCVCSSLG------NARVLFDEIPER-NVVTWNVMLNG 259
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 199/700 (28%), Positives = 331/700 (47%), Gaps = 107/700 (15%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+R S++ +++H II +G N L+ +Y + L+ A +LFDE++ + ++ TT
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTT 85
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGD----LDL-GRLIH 128
MV+ Y ++ I L + E V + MY+A++ S + D ++L ++ H
Sbjct: 86 MVSGYCASGD----IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH 141
Query: 129 ERITREKLEYDTVL--MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
E + Y +VL + ++D +C
Sbjct: 142 EGFKPDDFTYASVLAGLALVVDDEKQC--------------------------------V 169
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGE----IDDGLALFNFMPERDVVSWTGIIVGC 242
Q HA +K G +L+ +Y +C + +F+ +PE+D SWT ++ G
Sbjct: 170 QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGY 229
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ CF L E K D+ A +N+MISGYV +E
Sbjct: 230 VKNGCFDLGK------------ELLKGMDENMKLVA--------YNAMISGYVNCGLYQE 269
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGS 360
A+ ++ + SSG+ +D +T+ S ++AC N LL QVH ++ + + +
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGK----QVHAYVLRR-EDFSFHFDN 324
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-- 418
+L+ LY + G A +F ++P KD+V+W+ L+ G G A L+F++M N
Sbjct: 325 SLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 419 -----------------------------DVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ + S +K C+ L + G+Q HA V
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLV 444
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K GF+ +LI MY KCG +++ +F+ MP D VSW +I GQ+G EA+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVD 504
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
++EM++ ++P+ ITFL VL+AC HAGLV++ F SM+ Y + P +HY ++DLL
Sbjct: 505 VYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLL 564
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
++G F +AE +I +PFKP IW ++L C H N +L I A++L PE Y+
Sbjct: 565 CRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+LSN+YA G W+ +++VRK + G KK SWIE+ +
Sbjct: 625 LLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 203/441 (46%), Gaps = 71/441 (16%)
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
L R + ++Y AA+ + L + L + VH + GF+ L LID+Y K
Sbjct: 7 LVRAIANRY---AANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSS 63
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
E+D LF+ + E D ++ T ++ G Y + AR +F++
Sbjct: 64 ELDYARQLFDEISEPDKIARTTMVSG---------------YCASGDIALARSVFEE--- 105
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+ + ++N+MI+G+ N AI L + G D +T+ S L A + L+
Sbjct: 106 -TPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL-AGLALVVD 163
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN----VKSALELFHRLPKKDVVAWS 391
+ + +Q H + SG V + L+ +Y+R + + SA ++F +P+KD +W+
Sbjct: 164 DEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWT 223
Query: 392 GLIMGCTKHGLNSL--------------------------------AYLLFRDMINSNQD 419
++ G K+G L A + R M++S +
Sbjct: 224 TMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIE 283
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL---TSLIDMYLKCGEIDDG 476
+++F SV++ C+ L+ GKQVHA+ ++R ED + SL+ +Y KCG+ ++
Sbjct: 284 LDEFTYPSVIRACANARLLQLGKQVHAYVLRR----EDFSFHFDNSLVTLYYKCGKFNEA 339
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
A+F+ MP +D+VSW ++ G +G EA F+EM + N ++++ ++S
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAEN 395
Query: 537 GLVEEAWTIFTSMKPEYGLEP 557
G EE +F+ MK E G EP
Sbjct: 396 GFGEEGLKLFSCMKRE-GFEP 415
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A++ C + G+ H +++K G + GN L++MYA + +A ++F M +
Sbjct: 423 AIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLD 482
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW ++ A + A+ +Y ML+ G + P+ + VL ACS +G +D GR
Sbjct: 483 SVSWNALIAALGQHGHGVEAVDVYEEMLKKG-IRPDRITFLTVLTACSHAGLVDQGR 538
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 429 LKVCSCL--ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
L++C L SL+ + VH + GF+ L LID+Y K E+D LF + E
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D ++ T ++ G +G A + F+E S + + + +++ H A +F
Sbjct: 79 DKIARTTMVSGYCASGDIALARSVFEETPVS--MRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
MK E G +P + Y V L G A DD +Q +
Sbjct: 137 CKMKHE-GFKPD-DFTYASV-LAGLALVVDDEKQCV 169
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 344/675 (50%), Gaps = 44/675 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLL-----SMYADFTSLNDAHKLFDEM 64
L C R++ +GK +H +++ L QD +LL MY + A +FD M
Sbjct: 17 LTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRM 76
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVL-KACSLSGDLDL 123
+N+V+WT++++A+T A+ L+ ML G V P+ ++++L K +LD
Sbjct: 77 KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSG-VSPDRITFTSILLKWSGRERNLDE 135
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSM 181
G+ +H I + E D ++MN +++MY KCG + + +FD + NV W +
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD------PNVFSWTII 189
Query: 182 LSG-GKQVHAFCVKR--------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
++ + H V R G + + T T+++ G +++ L
Sbjct: 190 IAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL-----HAAT 244
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+S TG+ + +AL+++Y C L EA +F Q + ++ W+SMI+
Sbjct: 245 ISSTGL-----DRDAAVGTALINLYGKCGALEEAFGVFVQIDN------KDIVSWSSMIA 293
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
+ + Q + AI LL + G+ ++ TF + L+A +L F ++ ++H IV +GY
Sbjct: 294 AFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAF--QYGKEIHARIVQAGY 351
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D + S L+ +Y G V++A +F ++DVV+WS +I G +++ + A LFR+
Sbjct: 352 SDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFRE 411
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M N S + C+ + +LRRG Q+H G +K+ T+L+++Y KCG
Sbjct: 412 MEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGR 471
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+++ A+F M ++++++WT I + GQNG ++ M +KP+ I F+ +L +
Sbjct: 472 LEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVS 531
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C +AG + + + M ++G+ P +EH CMVD+LG+AG + AEQLI M F+
Sbjct: 532 CNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SSL 590
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
W +L AC+ HN+T + AE++ P++ + YV+LS+V+ G W++ + R+
Sbjct: 591 AWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMD 650
Query: 653 KLG-EKKAGMSWIEV 666
G ++ G S IE+
Sbjct: 651 GRGVQRLLGRSSIEI 665
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGF---EKEDITLTS--LIDMYLKCGEIDDGLALF 480
+++L CS L +L GK+VH ++ E+ D +L +I MYL+CG D L +F
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
M +++VV+WT +I G +A+ F++M+ S + P+ ITF +L
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSIL 123
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/673 (28%), Positives = 335/673 (49%), Gaps = 42/673 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR---KNIVSWTT 74
++ G+ +H +I ++ GN L+SMY+ SL DA + FD + R +++V+W
Sbjct: 156 NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 215
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG--RLIHERIT 132
M++A+ N A++L+ M G+ PN + +VL +C +G L L R IH RI
Sbjct: 216 MISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 275
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHA 190
+E + + L+D Y K GSL ++F + + S ++ ++M+S
Sbjct: 276 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPST--SLVTCSAMISA------ 327
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
C + G+ +E + L M L+ G G+ L + + ++ E + +
Sbjct: 328 -CWQNGWPQESLRL--FFAMNLE-GTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVV 383
Query: 251 SA---------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
SA L+ Y+ N L AR FD S +V WN+M + Y+ + ++
Sbjct: 384 SATRDNVLGTTLLTTYARSNDLPRARATFDAIQS------PDVVSWNAMAAAYLQHHRSR 437
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLL-NFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ L + G+ TF +AL AC S ++ L+ +G E D V +
Sbjct: 438 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 497
Query: 361 NLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN- 417
+++YA+ G++ A +F R+ ++D + W+ ++ HGL A+ LF+ M
Sbjct: 498 ATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL 557
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N+ +VL + S+ +G+++HA V GFE + + +L++MY KCG +DD
Sbjct: 558 VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQ 617
Query: 478 ALFKFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
A+F + DV++WT +I G Q G+A+ A+ F M Q ++PN +TF+ L+AC H
Sbjct: 618 AIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNH 677
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
G +E+ + + M P++G+ P +H+ C+VDLLG+ G D+AE+L+ E + D W
Sbjct: 678 GGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWM 736
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC+ + AE+++ PE S Y++L+++YA G W+ + +RK G
Sbjct: 737 ALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKG 796
Query: 656 -EKKAGMSWIEVS 667
G S +EV+
Sbjct: 797 IRADPGCSAVEVN 809
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 164/613 (26%), Positives = 286/613 (46%), Gaps = 49/613 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRII--KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ CG+ R++KQG+ LH I+ + L F ++L+ M+A +L +A L D A
Sbjct: 50 LQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA-- 107
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++ S T M+ A+ + RP+ A+ L++ M V PN A++ ACS G+L GR I
Sbjct: 108 SVYSCTAMIRAWMEHGRPDKAMELFDRM----EVRPNCHALIALVNACSCLGNLAAGRRI 163
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H +I+ E ++VL N L+ MY KCGSL ++ FD+ ++ +V WN+M+S
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR---ASKRDVVTWNAMISAF 220
Query: 185 ---GKQVHAFCVKRGFEKE------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G A + R +++ VT S++D ++ G + DV +
Sbjct: 221 LRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAG----------LLSLEDVRAI 270
Query: 236 TGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
G IVG E F +ALVD Y L +A ++F + S ++ ++MIS
Sbjct: 271 HGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPST--SLVTCSAMISAC 328
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N +E++ L ++ G T S L AC ++L S A + +
Sbjct: 329 WQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNAC-SMLQVGSATAFVLEQAMEVVSATR 387
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++G+ L+ YAR ++ A F + DVV+W+ + +H + A +LF M+
Sbjct: 388 DNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERML 447
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRR-----GKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+ V + + + + +C A + GK++ + + G E + + ++MY K
Sbjct: 448 --LEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 505
Query: 470 CGEIDDGLALFKFM--PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL-KPNEITF 526
CG + D A+F+ + RD ++W ++ G +G KEA FQ M +L KPN++TF
Sbjct: 506 CGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTF 565
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VL A + + I + G E ++++ + G DDA+ + +
Sbjct: 566 VAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 624
Query: 587 FKPDKTI-WASML 598
+ I W S++
Sbjct: 625 SNQEDVIAWTSLI 637
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 205/700 (29%), Positives = 335/700 (47%), Gaps = 73/700 (10%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD---FTSLNDAHKLFDEMARKNIVSWT 73
+++ + K LH +I K GL+ + NL+S + F SL A K + N + T
Sbjct: 44 KTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGT 103
Query: 74 -----TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+++ +++ AI ++ ++ G+V P+ F + VL AC+ S L G +H
Sbjct: 104 HYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAV-PDNFTFPFVLSACTKSAALTEGFQVH 162
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
I + E D + N+L+ Y +CG + R++FD+ S NV W S++ G
Sbjct: 163 GAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER------NVVSWTSLIGG-- 214
Query: 187 QVHAFCVKRGFEKEDVTL-TSLIDMYLK------CGEIDDGLALFNFMPERDVVSWTGII 239
KRG KE V+L ++++ ++ G I L + V + G +
Sbjct: 215 -----YAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGEL 269
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
E + ++ALVDMY C + +ARK+FD+ N+ L+N+++S YV
Sbjct: 270 E--LEVNALMVNALVDMYMKCGAIDKARKIFDE------CVDKNLVLYNTIMSNYVRQGL 321
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE------ 353
E + +L + G D T SA+ AC L + + HG ++ +G E
Sbjct: 322 AREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSC--GKWCHGYVLRNGLEGWDNVC 379
Query: 354 -------------------LDYIVG------SNLIDLYARLGNVKSALELFHRLPKKDVV 388
D ++ ++LI + R G+++SA ++F +P D+V
Sbjct: 380 NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLV 439
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+W+ +I + + A LFR M + ++ + V C L +L K +H +
Sbjct: 440 SWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYI 499
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
K+ + T+L+DM+ +CG+ + +F M +RDV +WT I G AI
Sbjct: 500 KKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAI 559
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F EM+Q +KP+ + F+ +L+A H GLVE+ W IF SMK YG+ P HY CMVDL
Sbjct: 560 ELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDL 619
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AG +A LI M +P+ IW S+L AC H N + + AE++ PE +
Sbjct: 620 LGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIH 679
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
V+LSN+YA+ G WD ++KVR K+ G K G S IE++
Sbjct: 680 VLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEIN 719
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 273/621 (43%), Gaps = 117/621 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + ++ +G +H I+K G +D+F N+L+ Y + ++ ++FD+M+ +N+
Sbjct: 146 LSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNV 205
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+++ Y A+ L+ M+E G + PN V+ AC+ DL LG +
Sbjct: 206 VSWTSLIGGYAKRGCYKEAVSLFFEMVEVG-IRPNSVTMVGVISACAKLQDLQLGEQVCT 264
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ------------YSNWAASAYGN- 174
I +LE + +++N L+DMY+KCG++ RK+FD+ SN+
Sbjct: 265 CIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLARE 324
Query: 175 -VALWNSML------------------------SGGKQVHAFCVKRGFEKEDVTLTSLID 209
+A+ ML S GK H + ++ G E D ++I+
Sbjct: 325 VLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIIN 384
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY+KCG+ + +F+ M + VSW +I G F + DM S A K+
Sbjct: 385 MYMKCGKQEMACRVFDRMLNKTRVSWNSLIAG------FVRNG--DMES-------AWKI 429
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F +A ++ WN+MI V +EAI L + S G+ D T AC
Sbjct: 430 F------SAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASAC 483
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + A +HG I D +G+ L+D++AR G+ +SA+++F+++ K+DV A
Sbjct: 484 GYLGALD--LAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSA 541
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ I G + A LF +M+
Sbjct: 542 WTAAIGAMAMEGNGTGAIELFDEML----------------------------------- 566
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC-----GQNGRA 504
++G + + + +L+ G ++ G +F+ M + ++ + GC G+ G
Sbjct: 567 QQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLL 626
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACR---HAGLVEEAWTIFTSMKPEY-GLEPHLE 560
EA++ M +++PN++ + +L+ACR + + A + + PE G+ L
Sbjct: 627 SEALSLINSM---QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLS 683
Query: 561 HYYCMVDLLGQAGCFDDAEQL 581
+ Y AG +DD ++
Sbjct: 684 NIY------ASAGRWDDVAKV 698
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 252/449 (56%), Gaps = 39/449 (8%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ L++ Y C ++ +A +LFD A + W S+++ L+ + A+++ +
Sbjct: 42 NTLLNAYGKCGLIQDALQLFD------ALPRRDPVAWASLLTACNLSNRPHRALSISRSL 95
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
S+G D + F S +KAC NL + + QVH S + D +V S+LID+YA+ G
Sbjct: 96 LSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFG 155
Query: 371 ----------NVKS---------------------ALELFHRLPKKDVVAWSGLIMGCTK 399
++ S A LF + P +++ AW+ LI G +
Sbjct: 156 LPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQ 215
Query: 400 HGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
G A+ LF +M + V + ++SSV+ C+ LA GKQ+H + G+E
Sbjct: 216 SGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLF 275
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+LIDMY KC ++ +F M +DVVSWT IIVG Q+G+A+EA+A + EM+ +
Sbjct: 276 ISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAG 335
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+KPNE+TF+G++ AC HAGLV + T+F +M ++G+ P L+HY C++DL ++G D+A
Sbjct: 336 VKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEA 395
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
E LI MP PD+ WA++L +C+ H NT++ IA+ LL PEDPS Y++LSN+YA
Sbjct: 396 ENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGA 455
Query: 639 GMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
GMW+ +SKVRK L KKA G S I++
Sbjct: 456 GMWEDVSKVRKLMMTLEAKKAPGYSCIDL 484
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 206/448 (45%), Gaps = 50/448 (11%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
R+S K LH +IIK GL+Q N LL+ Y + DA +LFD + R++ V+W ++
Sbjct: 16 RQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASL 75
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--GRLIHERITR 133
+TA + RP+ A+ + +L G P+ F++++++KAC+ G L + G+ +H R
Sbjct: 76 LTACNLSNRPHRALSISRSLLSTG-FHPDHFVFASLVKACANLGVLHVKQGKQVHARFFL 134
Query: 134 EKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQ 187
D V+ ++L+DMY K G R +FD S+ N W +M+SG G++
Sbjct: 135 SPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSL------NSISWTTMISGYARSGRK 188
Query: 188 VHAFCVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPER-----DVVSWTGIIVG 241
AF + R ++ T+LI ++ G D LF M D + + ++
Sbjct: 189 FEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGA 248
Query: 242 C--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
C +E F +AL+DMY+ C+ L A+ +F +
Sbjct: 249 CANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCR------ 302
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
+V W S+I G + Q EEA+ L + +G+ + TF + AC + S+
Sbjct: 303 KDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSH-AGLVSKGRT 361
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++ G + L+DL++R G++ A L +P D W+ L+ C +H
Sbjct: 362 LFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRH 421
Query: 401 GLNSLAYLLFRDMIN-SNQDVNQFIISS 427
G +A + ++N +D + +I+ S
Sbjct: 422 GNTQMAVRIADHLLNLKPEDPSSYILLS 449
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 6/216 (2%)
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
A ++H I+ +G + + L++ Y + G ++ AL+LF LP++D VAW+ L+ C
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL--RRGKQVHAFCVKRGFEKE 456
A + R ++++ + F+ +S++K C+ L L ++GKQVHA F +
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
D+ +SLIDMY K G D G A+F + + +SWT +I G ++GR EA F++
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
L + ++S +G +A+ +F M+ E
Sbjct: 201 RNL----FAWTALISGLVQSGNGVDAFHLFVEMRHE 232
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/709 (28%), Positives = 332/709 (46%), Gaps = 85/709 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN--IVSWTT 74
++I Q K +H +++ +G+ T ++L+S Y L+ A L + + W +
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLT-SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ +Y N N + L+ ++ S P+ + + V KAC + G H
Sbjct: 98 LIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 135 KLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML---------- 182
+ + N L+ MY +C SL+ RK+FD+ S W +V WNS++
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW------DVVSWNSIIESYAKLGKPK 210
Query: 183 -----------------------------------SGGKQVHAFCVKRGFEKEDVTLTSL 207
S GKQ+H F V + L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+DMY KCG +D+ +F+ M +DVVSW ++ G YS +A
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG---------------YSQIGRFEDAV 315
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+LF++ +V W++ ISGY EA+ + + SSG+ + T S L
Sbjct: 316 RLFEKMQEEKIKM--DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 328 ACINLLNFNSRFALQVHGL-----IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
C ++ + + + + +G+ + +V + LID+YA+ V +A +F L
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 383 -PK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASL 438
PK +DVV W+ +I G ++HG + A L +M + N F IS L C+ LA+L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 439 RRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
R GKQ+HA+ ++ + +++ LIDMY KCG I D +F M ++ V+WT ++ G
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G +G +EA+ F EM + K + +T L VL AC H+G++++ F MK +G+ P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY C+VDLLG+AG + A +LI EMP +P +W + L C H +L AE++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ Y +LSN+YA G W ++++R + G +K+ G SW+E
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 241/545 (44%), Gaps = 63/545 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ CG+ S++ G+S H + G ++F GN L++MY+ SL+DA K+FDEM+ ++
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ +Y +P A+ +++ M P+ VL C+ G LG+ +H
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
++ + + N L+DMY KCG + + +SN + +V WN+M++G Q+
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCG-MMDEANTVFSNMSVK---DVVSWNAMVAGYSQIG 309
Query: 190 AF-CVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWT 236
F R FEK + VT ++ I Y + G + L + M + V+
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 237 GIIVGCF---------ECSCF------------------TLSALVDMYSNCNVLCEARKL 269
++ GC E C+ ++ L+DMY+ C + AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFTSALK 327
FD S +V W MI GY + +A+ LLS + +++T + AL
Sbjct: 430 FDSLSPKER----DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKD 386
AC +L R Q+H + + + SN LID+YA+ G++ A +F + K+
Sbjct: 486 ACASLAAL--RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG----- 441
V W+ L+ G HG A +F +M ++ + VL CS + +G
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
+ F V G E L+D+ + G ++ L L + MP E V W + C
Sbjct: 604 RMKTVFGVSPGPEH----YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 501 NGRAK 505
+G+ +
Sbjct: 660 HGKVE 664
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 177/491 (36%), Gaps = 156/491 (31%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C + GK LHC + + Q++F GN L+ MYA +++A+ +F M+
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE---------------------------- 97
K++VSW MV Y+ R A+RL+ M E
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 98 ------YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-------DTVLMN 144
++PN +VL C+ G L G+ IH + ++ + +++N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------------ 184
L+DMY KC + R +FD S +V W M+ G
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLS----PKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTL---TSLIDMYLK 213
GKQ+HA+ ++ ++ V L LIDMY K
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAK 525
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
CG I D +F+ M ++ V+WT ++ G
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTG-------------------------------- 553
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-- 331
YG + GY EEA+ + + G +D T L AC +
Sbjct: 554 -------YG--------MHGY-----GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
+++ + ++ + S Y + L+DL R G + +AL L +P + V W
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHY---ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 391 SGLIMGCTKHG 401
+ C HG
Sbjct: 651 VAFLSCCRIHG 661
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKY-------GLSQDIFTGNNLLSMYADFTSLNDAH 58
++ L C ++ GK +HC IKY G + N L+ MYA ++ A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 59 KLFDEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKAC 115
+FD ++ K ++V+WT M+ Y+ + N A+ L + M E PN F S L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSLT--RKLFDQYSNWAASAY 172
+ L +G+ IH R + + + N L+DMY KCGS++ R +FD N A
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD---NMMAK-- 542
Query: 173 GNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
N W S+++G G A + + GF+ + VTL ++ G ID G+
Sbjct: 543 -NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
FN M + G+ G +C LVD+ L A +L ++
Sbjct: 602 FNRMK-----TVFGVSPGPEHYAC-----LVDLLGRAGRLNAALRLIEEMPMEPPPVVWV 651
Query: 284 VALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
L I G V L E E IT L+ H SYT S L A
Sbjct: 652 AFLSCCRIHGKVELGEYAAEKITELASNHDG-----SYTLLSNLYA 692
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/611 (29%), Positives = 302/611 (49%), Gaps = 87/611 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y +VL+ C+ G+ +H I + D L L+ Y CG L R++FD
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFE----------------KE 200
NV LWN M+S ++ F V++G E ++
Sbjct: 162 K------KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRD 215
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGCFECSCFTL------ 250
++ S+I Y+ G + GL ++ M + D+ + ++VGC +L
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 251 --------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ L+DMYS C L A ++F++ NV W SMI+GY
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER------NVVSWTSMIAGYTR 329
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ +++ AI LL + G+ +D TS L AC + ++ VH I + E +
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN--GKDVHDYIKANNMESNL 387
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V + L+D+YA+ G++++A +F + KD+++W+ +I G K ++A
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GELKPDSRTMA---------- 436
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
VL C+ L++L RGK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 437 ----------CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 486
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF +P +D+VSWT +I G G +G EAIA F EM + ++P+E++F+ +L AC H+
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL+E+ W F MK ++ +EP LEHY CMVDLL + G A + + +P PD TIW +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLG 655
+L C +++ +L +AE++ PE+ YV+L+N+YA W+ + ++R K GK+
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 656 EKKAGMSWIEV 666
K G SWIE+
Sbjct: 667 RKNPGCSWIEI 677
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 186/436 (42%), Gaps = 106/436 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL I+ L C ++ GK++H IK + I N LL MY+ L+ A ++
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M +N+VSWT+M+ YT + R + AI+L M + G V+ + +++L AC+ SG
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEG-VKLDVVAITSILHACARSGS 367
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LD G+ +H+ I +E + + N L+DMY KCGS+ S ++ ++ WN+
Sbjct: 368 LDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEA----ANSVFSTMVVKDIISWNT 423
Query: 181 M-----------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
M L GK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 424 MIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
LF+ +P +D+VSWT +I G +
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAG----------------------------------YG 509
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
YGN EAI + + +G+ D +F S L AC
Sbjct: 510 MHGYGN------------------EAIATFNEMRDAGIEPDEVSFISILYAC-------- 543
Query: 338 RFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP-K 384
H ++ G+ YI+ ++ ++DL +R GN+ A E LP
Sbjct: 544 -----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIA 598
Query: 385 KDVVAWSGLIMGCTKH 400
D W L+ GC +
Sbjct: 599 PDATIWGALLCGCRNY 614
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R + L C ++++GK +H I++ G S D N L+ +Y L A LF
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K++VSWT M+ Y + N AI +N M + G +EP+ + ++L ACS SG L
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLL 549
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWN 179
+ G R + +E ++D+ + G+L++ F + A A +W
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA----TIWG 605
Query: 180 SMLSGGKQVH 189
++L G + H
Sbjct: 606 ALLCGCRNYH 615
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 210/697 (30%), Positives = 317/697 (45%), Gaps = 136/697 (19%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ ++ H ++K ++ + F N L+S YA L +A ++FD + +
Sbjct: 32 SLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLR---------- 81
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT-REKL 136
N F Y+A+L A + G D R + E I ++
Sbjct: 82 --------------------------NTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWNSM-----LSGGKQVHA 190
Y+ V+ G R L +++ + +AY + ++ L G+QVH
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
V R +DV + +
Sbjct: 176 L-VARSPHADDVHIGT-------------------------------------------- 190
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
ALVDMY+ C +AR++FD A NV WNS+I+ Y N EA+ L +
Sbjct: 191 -ALVDMYAKCERPVDARRVFD------AMPERNVVSWNSLITCYEQNGPVGEALVLFVEM 243
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARL 369
++G D T +S + AC L R QVH +V D +V +N L+D+YA+
Sbjct: 244 MATGFFPDEVTLSSVMSACAGLAA--EREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKC 301
Query: 370 G-------------------------------NVKSALELFHRLPKKDVVAWSGLIMGCT 398
G NV+ A +F ++ +K+V+AW+ LI
Sbjct: 302 GRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYA 361
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF----- 453
++G A LF + + + +VL C +A L+ G+Q H +K GF
Sbjct: 362 QNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFG 421
Query: 454 -EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E + SL+DMYLK G IDDG +F+ M RD VSW +IVG QNGRAK+A+ F+
Sbjct: 422 PESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFE 481
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M+ S P+ +T +GVLSAC H+GLV+E F M ++G+ P +HY CMVDLLG+A
Sbjct: 482 RMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRA 541
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G +AE+LI +MP +PD +WAS+L AC H N +L A +L PE+ YV+LS
Sbjct: 542 GHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLS 601
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
N+YA +G W + +VR++ K G K+ G SWIE+ S
Sbjct: 602 NMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGS 638
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 177/476 (37%), Gaps = 143/476 (30%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + ++ G+ +H + + + D+ G L+ MYA DA ++FD M +N
Sbjct: 157 ALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW +++T Y N A+ L+ M+ G P+ S+V+ AC+ GR +H
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFF-PDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 129 ER-ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASA-- 171
+ R++L D VL N L+DMY KCG R +FD + +A SA
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANV 335
Query: 172 -----------YGNVALWNSMLSGGKQ--------------------------------- 187
NV WN +++ Q
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 188 -----------VHAFCVKRGF------EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
H +K GF E + SL+DMYLK G IDDG +F M R
Sbjct: 396 GNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
D VSW +IVG
Sbjct: 456 DNVSWNAMIVG------------------------------------------------- 466
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSR---FALQVHG 345
Y N + ++A+ L + S DS T L AC L++ R F + HG
Sbjct: 467 ---YAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHG 523
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ + + + ++DL R G++K A EL +P + D V W+ L+ C H
Sbjct: 524 ITPSRDHY------TCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 328/650 (50%), Gaps = 49/650 (7%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-----RKNIVSWTTMVTAYTSNKRPNWAI 89
+++F N+ S+Y + S+ + + ++E + N++SWT+ +++ + A+
Sbjct: 17 QRNVFIRNSAYSLY--YRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAV 74
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
L+ ML PN +V++A S G D+ R+I + + E + + L+
Sbjct: 75 GLFKMML-MTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGF 133
Query: 150 YVKCG-SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GFEK 199
Y + K+F+Q + ++ LW++M+S G+ AF + R G E
Sbjct: 134 YSDYDMGIVWKIFNQ------TPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEP 187
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
V++ S++ G + G + F ++ T + ++LVDMY+
Sbjct: 188 NHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNV-----------HNSLVDMYAK 236
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
C + +FDQ ++ W ++I G + N+ EA S + S D
Sbjct: 237 CRNFKASMLVFDQILE------KDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE 290
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+ A I +F + HG ++ +G +G+ L+ +YA+ G ++SA+ +F
Sbjct: 291 TIVQDLIVAIIQADE--HKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVF 348
Query: 380 HRLPKKDVVAWSGLI--MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+L KKD ++WS +I ++H N+L F+ M ++++ N+ S+L+ CS + +
Sbjct: 349 DQLNKKDYISWSAMISVHAHSRHPYNALE--TFKQMQSTDERPNEITFVSLLQACSLIGA 406
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
G+ + A K G+ ++LID+Y K G I+ G A+F +P +D+V W+ +I G
Sbjct: 407 QELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMING 466
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G NG EA+ F M+ +KPNE+ F+ VLSAC H GL E W+ F+SM+ +YG+ P
Sbjct: 467 YGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIP 526
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE-THNNTKLVSIIAEQ 616
L HY CMVDL+ + G + A Q + +MP +PDK IW ++L C TH + ++ ++AE+
Sbjct: 527 KLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAER 586
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
L+ P++ S YV+LSN+YA G W + ++RK + G KK G S IE
Sbjct: 587 LIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIE 636
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 224/530 (42%), Gaps = 69/530 (13%)
Query: 29 IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA 88
+IK G ++ L+ Y+D+ + K+F++ K++V W+ MV+A + + A
Sbjct: 115 VIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEA 173
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
++ M +Y VEPN ++L AC+ G L G+ IH ++ T + N+L+D
Sbjct: 174 FEIFRAM-QYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVD 232
Query: 149 MYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFE-------- 198
MY KC + + FDQ ++ W +++ G + C + F+
Sbjct: 233 MYAKCRNFKASMLVFDQILE------KDLISWTTIIRGC--IENDCPREAFKAFSRMQFS 284
Query: 199 ---KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
++ + LI ++ E G+A F+ + ++++ I +AL+
Sbjct: 285 CFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSI-----------GTALLQ 333
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MY+ L A +FDQ + + W++MIS + + A+ + S+
Sbjct: 334 MYAKFGELESAIIVFDQLNK------KDYISWSAMISVHAHSRHPYNALETFKQMQSTDE 387
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ TF S L+AC + ++Q H +GY + + S LIDLY + G +
Sbjct: 388 RPNEITFVSLLQACSLIGAQELGESIQAHA--TKAGYLSNAFLSSALIDLYCKFGRINQG 445
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--- 432
+F+ +P KD+V WS +I G +G A F +M+ N+ + SVL C
Sbjct: 446 RAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHC 505
Query: 433 -------SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
SC +S+ + K G + ++D+ + G I+ L MP
Sbjct: 506 GLEHEGWSCFSSMEQ---------KYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPM 556
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR---LKPNEITFLGVLS 531
E D W ++ GC R+ E++ R L P ++ +LS
Sbjct: 557 EPDKRIWGALLAGC----RSTHGSIEIAELVAERLIGLDPQNTSYYVILS 602
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 43/265 (16%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
K G + H ++K GL + G LL MYA F L A +FD++ +K+ +SW+ M++ +
Sbjct: 307 KFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 366
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
++ P A+ + M + PN + ++L+ACSL G +LG I T+ +
Sbjct: 367 AHSRHPYNALETFKQM-QSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSN 425
Query: 140 TVLMNTLLDMYVKCGSLT--RKLFDQYSN-----WAA--SAYG-------NVALWNSMLS 183
L + L+D+Y K G + R +F++ W++ + YG + +++ML+
Sbjct: 426 AFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLA 485
Query: 184 GGKQ--------VHAFCVKRGFEKEDVTLTS-----------------LIDMYLKCGEID 218
G + V + C G E E + S ++D+ + G I+
Sbjct: 486 CGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIE 545
Query: 219 DGLALFNFMP-ERDVVSWTGIIVGC 242
L N MP E D W ++ GC
Sbjct: 546 GALQFVNKMPMEPDKRIWGALLAGC 570
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L+ C + + G+S+ K G + F + L+ +Y F +N +F+E+
Sbjct: 394 FVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIP 453
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
K++V W++M+ Y N + A+ +++ML G V+PN ++ +VL ACS G
Sbjct: 454 TKDLVCWSSMINGYGLNGCGDEALETFSNMLACG-VKPNEVVFISVLSACSHCG 506
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 282/523 (53%), Gaps = 41/523 (7%)
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
+ AYT N A+ L++ +L+Y ++P+ F Y +VLKAC G D GR+IH + +
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 136 LEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS-------GGK 186
+D V+ ++L+ ++ KC +LFD+ +VA WN+++S K
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPER------DVACWNTVISCYYQDGKAEK 114
Query: 187 QVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
+ F R GFE VTLT++I + +++ G + R+V+ ++ G
Sbjct: 115 ALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEI-----HREVMQNGMVLDG--- 166
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
F SALVDMY L A+ +F+Q A WNS+I+GY ++E I
Sbjct: 167 ---FVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVA------WNSLIAGYSSAADSKECI 217
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLI 363
L ++ G T +S L AC + + RF +HG V + +LD V S LI
Sbjct: 218 ELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRF---IHGYAVRNRVQLDIFVSSGLI 274
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+LY + G V+SA +F+ LPK +VV W+ +I G G A ++ +M ++ +
Sbjct: 275 ELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAV 334
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
SS+L CS LA+L +GK++H K E +I + +L+DMY KCG +D+ L++F +
Sbjct: 335 TFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKL 394
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
PERD++SWT II G +G+A EA+ F+E+ QS+ P+ +TFL VLSAC HAGLV++ +
Sbjct: 395 PERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGY 454
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
F M YG++P LEHY C++DLLG+ + Q + E+P
Sbjct: 455 YYFNQMITNYGIKPGLEHYSCLIDLLGR---IQEQSQELNEIP 494
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 211/466 (45%), Gaps = 52/466 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG G+ +H +IK G DI ++L+S++A A +LFDEM +++
Sbjct: 37 LKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDV 96
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W T+++ Y + + A+ ++ M + G EPN + V+ +C+ DL+ G+ IH
Sbjct: 97 ACWNTVISCYYQDGKAEKALEMFGKMRDSG-FEPNSVTLTTVISSCARLLDLERGKEIHR 155
Query: 130 RITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + + D + + L+DMY K C L + +F+Q A WNS+++G
Sbjct: 156 EVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVA------WNSLIAGYSS 209
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKC--------GEIDDGLALFNFMPERDVV 233
K+ + E T+T+L + L C G G A+ N + + D+
Sbjct: 210 AADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRV-QLDIF 268
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+G+I ++Y C + A +F NV LWN MISG
Sbjct: 269 VSSGLI---------------ELYFKCGKVQSAENIFYMLPK------ANVVLWNVMISG 307
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
YV +A+ + + + + D+ TF+S L AC L ++H I + E
Sbjct: 308 YVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEK--GKEIHNCITKNDLE 365
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ IV L+D+YA+ G V AL +F++LP++D+++W+ +I HG A LF ++
Sbjct: 366 TNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEEL 425
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRG-----KQVHAFCVKRGFE 454
S + +VL CS + +G + + + +K G E
Sbjct: 426 QQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLE 471
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 49/278 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ + C + +++GK +H +++ G+ D F G+ L+ MY F L+ A +F++M
Sbjct: 134 LTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMP 193
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K +V+W +++ Y+S I L+ M G+ +P S++L ACS + L GR
Sbjct: 194 KKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGT-KPTVTTLSSILLACSRAAHLQHGR 252
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
IH R +++ D + + L+++Y KCG K+ + + NV LWN M+SG
Sbjct: 253 FIHGYAVRNRVQLDIFVSSGLIELYFKCG----KVQSAENIFYMLPKANVVLWNVMISGY 308
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GK++H K E +
Sbjct: 309 VTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNE 368
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ + +L+DMY KCG +D+ L++FN +PERD++SWT II
Sbjct: 369 IVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSII 406
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ F SVLK C L G+ +H +K GF + + +SL+ ++ KC + LF
Sbjct: 29 DSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAIQLF 88
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
MPERDV W +I Q+G+A++A+ F +M S +PN +T V+S+C +E
Sbjct: 89 DEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLE 148
Query: 541 EAWTIFTS-MKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
I M+ L+ + +VD+ G+ GC D A+ + +MP K W S++
Sbjct: 149 RGKEIHREVMQNGMVLDGFVGS--ALVDMYGKFGCLDLAKDIFEQMP-KKTLVAWNSLIA 205
Query: 600 ACETHNNTK 608
+ ++K
Sbjct: 206 GYSSAADSK 214
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 260/470 (55%), Gaps = 54/470 (11%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ-----YSSWAA--SAYGNVALWN 288
+ II F+ S + L+D+Y C ++ +A +LFD+ + SWA+ +A+ +
Sbjct: 27 SQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPR 86
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+S +LN T+ +H G+ D + F ++AC +L R QVH +
Sbjct: 87 RTLS--MLN-------TMFTH---DGLQPDHFVFACIVRACSSLGYL--RLGKQVHARFM 132
Query: 349 TSGYELDYIVGSNLIDLY-------------------------------ARLGNVKSALE 377
S + D +V S+LID+Y AR G A++
Sbjct: 133 LSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLA 436
LF + P +++ +W+ LI G + G ++ LF +M D V+ ++SSV+ C+ LA
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
L GKQ+H + GFE +L+DMY KC +I +F MP +DV+SWT IIV
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G+A+EA+ + EM+ SR+KPNE+TF+G+L AC HAGLV +F SM +Y +
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P L+HY C++DLL ++G D+AE L+ ++PFKPD+ WAS+L AC HNN ++ IA++
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+L PEDPS Y++LSNVYA MW S+SKVRK + K+ G S I+
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 218/472 (46%), Gaps = 73/472 (15%)
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WAA--SAYG---- 173
+H +I + + ++L NTLLD+Y KCG + + +LFD+ N WA+ +A+
Sbjct: 25 LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84
Query: 174 ---NVALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLT 205
+++ N+M + GKQVHA + F ++V +
Sbjct: 85 PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKS 144
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
SLIDMY KCG+ D+ A+F+ + ++ VSWT +I G Y+ CE
Sbjct: 145 SLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISG---------------YARSGRKCE 189
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM-CIDSYTFTS 324
A LF Q + N+ W ++ISG + + + +L + + G+ +D +S
Sbjct: 190 AMDLFLQ------APVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSS 243
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
+ C NL Q+HGL++ G+E + + L+D+YA+ ++ +A ++F+R+P+
Sbjct: 244 VVGGCANLALLE--LGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KDV++W+ +I+G +HG A L+ +M+ S N+ +L CS + RG+++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361
Query: 445 -HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ T L+D+ + G +D+ L +P + D +W ++ C ++
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421
Query: 503 RAKEAIAYFQEMIQSRLKPNE----ITFLGVLSACRHAGLVEEAWTIFTSMK 550
+ + ++ LKP + I V + G V + + +SM+
Sbjct: 422 NLEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 199/445 (44%), Gaps = 70/445 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M++ + L+ C +R+S LH +IIK G + N LL +Y + A +L
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM ++ VSW +++TA+ P + + N M + ++P+ F+++ +++ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L LG+ +H R D V+ ++L+DMY KCG R +FD + N W
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSI------LFKNSVSW 174
Query: 179 NSMLSG----GKQVHAF-CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER--- 230
SM+SG G++ A + + + T+LI ++ G +LFN M
Sbjct: 175 TSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGID 234
Query: 231 --DVVSWTGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARK 268
D + + ++ GC FE F +ALVDMY+ C+ + A+
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F + +V W S+I G + + EEA+TL + S + + TF L A
Sbjct: 295 IFYRMPR------KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYA 348
Query: 329 CINLLNFNSRFALQVHGLIVTSGYEL------DYIVGSN------LIDLYARLGNVKSAL 376
C H +V+ G EL DY + + L+DL +R G++ A
Sbjct: 349 C-------------SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAE 395
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKH 400
L ++P K D W+ L+ C +H
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRH 420
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 200/646 (30%), Positives = 317/646 (49%), Gaps = 40/646 (6%)
Query: 39 FTGNNLL-----SMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
F G+ LL Y + DA +F + N+ SWT ++ AY N + L
Sbjct: 112 FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVK 152
M G V PN + V+ A S G+ D R IH R +L YD VL+ L+DMY K
Sbjct: 172 QMDLLG-VWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAK 230
Query: 153 CGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLID 209
CG + +FDQ N ++A N+M+S Q+ G+ + V T +
Sbjct: 231 CGDIFHAEVVFDQARN------KDLACCNAMISAYIQL-------GYTVDAVSTFNRIQP 277
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS-----CFTLSALVDMYSNCNVLC 264
L+ ++ L LF V S + CF S +ALV MYS C L
Sbjct: 278 SGLQPNQVTYAL-LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLE 336
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+AR++FD+ NV WN MI+GY +EA+ L + ++G+ D TF +
Sbjct: 337 DARRVFDRMPG------KNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVN 390
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--L 382
L++C L + +H +V +GY+ V S LI +Y+ G++ A+++FH+
Sbjct: 391 VLESCS--LAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVT 448
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
V++W+ ++ T++G A LFR M N S + CS + +L G
Sbjct: 449 THSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGH 508
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+ + G + + TSLI++Y KCG +D L +F ++ +++V+W I+ QNG
Sbjct: 509 AIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNG 568
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ QEM +PNE+T L +L C H GLV +A + F SM + L P EHY
Sbjct: 569 EETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHY 628
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
C+VDLLG++G ++ E I+ PF D +W S+L +C H++ + A ++L P
Sbjct: 629 GCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDP 688
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVS 667
++ S YV+LSN++A +GM D++ + K AG++ +K+ S+IEV+
Sbjct: 689 KNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVN 734
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 224/496 (45%), Gaps = 46/496 (9%)
Query: 21 QGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ + +H R L+ D+ L+ MYA + A +FD+ K++ M++AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
A+ +N + G ++PN Y+ + +AC+ +G R+ H KL D
Sbjct: 260 IQLGYTVDAVSTFNRIQPSG-LQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPD 318
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQV 188
V+ L+ MY +CGSL R++FD+ NV WN M++G Q+
Sbjct: 319 VVVNTALVSMYSRCGSLEDARRVFDRMPG------KNVVTWNVMIAGYAQEGYTDEALQL 372
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
+ G E +++T ++++ C + + RD+ ++ ++ S
Sbjct: 373 YVSMEAAGVEPDEITFVNVLE---SCSLAE------HLAAGRDI--HKHVVDAGYDSSLT 421
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
LSAL+ MYS C L +A +F + + + +V W +M++ N + A+ L
Sbjct: 422 VLSALITMYSACGSLGDAVDVFHK----GVTTHSSVISWTAMLTALTRNGEGRSALALFR 477
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ G+ + TF S + AC ++ A + ++ +G+ +D ++G++LI+LY +
Sbjct: 478 KMDLEGVRANVVTFVSTIDACSSIGALVEGHA--IFERVIVTGHLIDVVLGTSLINLYGK 535
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G + ALE+FH L K++V W+ ++ +++G +L+ L ++M N+ + ++
Sbjct: 536 CGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNM 595
Query: 429 LKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
L CS + + V+ C+ E L+D+ + G++++ A
Sbjct: 596 LFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEH----YGCLVDLLGRSGQLEEVEAFISSK 651
Query: 484 P-ERDVVSWTGIIVGC 498
P D V W ++ C
Sbjct: 652 PFSLDSVLWMSLLGSC 667
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 202/486 (41%), Gaps = 68/486 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C + H I L D+ L+SMY+ SL DA ++FD M KN+
Sbjct: 291 FRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNV 350
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y + A++LY M E VEP+ + VL++CSL+ L GR IH+
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSM-EAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----G 185
+ + +++ L+ MY CGSL + D + + + +V W +ML+ G
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAV-DVFHK-GVTTHSSVISWTAMLTALTRNG 467
Query: 186 KQVHAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS--WTGI 238
+ A + R + E VT S ID G + +G A+F ER +V+ +
Sbjct: 468 EGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIF----ERVIVTGHLIDV 523
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
++G ++L+++Y C L A ++F S + N+ WN++++ N
Sbjct: 524 VLG---------TSLINLYGKCGRLDYALEVFHYLS------FKNIVTWNTILAASSQNG 568
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHG--LIVTSGYE 353
+ + LL + G + T + L C + + S F V+G L+ TS +
Sbjct: 569 EETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHY 628
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH-----GLNSLAY 407
L+DL R G ++ P D V W L+ C H GL +
Sbjct: 629 ------GCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARR 682
Query: 408 LLFRDMINSNQDV---NQFIISSVLKVCSCLASL---RRGKQ------------VHAFCV 449
+L D N++ V N F +L LA L R K+ VH F V
Sbjct: 683 VLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGV 742
Query: 450 KRGFEK 455
+ G +
Sbjct: 743 RAGLHR 748
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
Q H KR F + + L +++ Y KCG + D +F + +V SWT ++ QNG
Sbjct: 103 QAHISHSKR-FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNG 161
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
K + ++M + PN +T V+ A G +EA I
Sbjct: 162 HHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKI 204
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V + C ++ +G ++ R+I G D+ G +L+++Y L+ A ++F ++
Sbjct: 492 VSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSF 551
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
KNIV+W T++ A + N + L M + +PN +L CS +G
Sbjct: 552 KNIVTWNTILAASSQNGEETLSDELLQEM-DLDGAQPNEMTLLNMLFGCSHNG 603
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 265/521 (50%), Gaps = 57/521 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L GK +H GF++ + L++ LI MY+KCG+ D +F+ M R++ SW ++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G + +L AR +FD +V WN+M+ GY +
Sbjct: 122 G---------------FVKSGMLVRARVVFDSMPE------RDVVSWNTMVIGYAQDGNL 160
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ + SG+ + ++F L AC+ + Q HG ++ +G+ + ++
Sbjct: 161 HEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQL--QLNQQAHGQVLVAGFLSNVVLSC 218
Query: 361 NLIDLYAR-------------------------------LGNVKSALELFHRLPKKDVVA 389
++ID YA+ LG++++A +LF +P+K+ V+
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVS 278
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G + G LA LFR MI QF SS L + +ASLR GKQ+H + +
Sbjct: 279 WTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMI 338
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF-MPERDVVSWTGIIVGCGQNGRAKEAI 508
+ I +SLIDMY K G ++ +F+ ++D V W +I Q+G +A+
Sbjct: 339 RTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKAL 398
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+MI+ R+ PN T + +L+AC H+GLVEE F SM ++G+ P EHY C++DL
Sbjct: 399 QMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF + I EMPF+PDK IW ++L C H N +L AE+L+ PE + Y
Sbjct: 459 LGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPY 518
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
++LS++YA G W+ + K+R KK K+ +SWIE+ +
Sbjct: 519 ILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIEN 559
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 223/521 (42%), Gaps = 78/521 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG +S+KQGK +H + G + + N+L+ MY DA K+FD+M +N
Sbjct: 53 LQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRN 112
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SW MV+ GF+ S G L+
Sbjct: 113 LYSWNNMVS---------------------------GFVKS--------------GMLVR 131
Query: 129 ERITREKL-EYDTVLMNTLLDMYVKCGSLTRKLF---------DQYSNWAASAYGNVALW 178
R+ + + E D V NT++ Y + G+L L+ +++ ++ + +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVK 191
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ L +Q H + GF V S+ID Y KCG+++ F+ M +D+ WT +
Sbjct: 192 SRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
I G Y+ + A KLF + N W ++I+GYV
Sbjct: 252 ISG---------------YAKLGDMEAADKLFREMPE------KNPVSWTALIAGYVRQG 290
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+ A+ L + + + + +TF+S L A ++ + R Q+HG ++ + + IV
Sbjct: 291 SGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASL--RHGKQIHGYMIRTNVRPNAIV 348
Query: 359 GSNLIDLYARLGNVKSALELFHR-LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
S+LID+Y++ G+++++ +F K+D V W+ +I +HGL A + DMI
Sbjct: 349 TSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFR 408
Query: 418 QDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N+ + +L CS + G + + V+ G + LID+ + G +
Sbjct: 409 VHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++ + MP E D W I+ C +G + +E+I+
Sbjct: 469 MSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIK 509
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 47/256 (18%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGL----- 477
+++S+L+ C SL++GK +H GF++ + L++ LI MY+KCG+ D
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 478 --------------------------ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+F MPERDVVSW +++G Q+G EA+ +F
Sbjct: 108 MHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFF 167
Query: 512 QEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAW-TIFTSMKPEYGLEPHLEHYYCMVD 567
+E+ +S +K NE +F G+L+AC R L ++A + + G ++ ++D
Sbjct: 168 KELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVA-----GFLSNVVLSCSIID 222
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPS 626
+ G + A++ EM K D IW +++ + + A++L PE +P
Sbjct: 223 AYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDME----AADKLFREMPEKNPV 277
Query: 627 KYVMLSNVYATLGMWD 642
+ L Y G D
Sbjct: 278 SWTALIAGYVRQGSGD 293
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 294/581 (50%), Gaps = 47/581 (8%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERI-----------TREKLEYDTVLMNTLLDMYVKCGSL 156
+S +L +C GDL LG +H + +R L + V N+L+ MY +CG
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRR 73
Query: 157 --TRKLFDQYSNWAASAYGNVALWNSMLSGGKQV-HAFCVKRGFEKEDV------TLTSL 207
++FD+ + WNS+++ + A + R + D T T++
Sbjct: 74 EDAARVFDEMR------VRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRATFTTV 127
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEA 266
+ + G +P +V G++V C FE +ALV Y C A
Sbjct: 128 LSECARAGAAS--------LPACAMVH--GLVVSCGFEAEVPVGNALVTAYFECGSPASA 177
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++F A NV W +MISG E +E+ +L + + + ++ T++ AL
Sbjct: 178 ERVFHGM------AEKNVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCAL 230
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC L +R QVHGL+V +G+E D V S L+D+Y++ G ++ AL +F + D
Sbjct: 231 LACARSLA--AREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPD 288
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V + +++G ++GL A+ LF +M+ + ++++ +S+VL A GKQ+HA
Sbjct: 289 EVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHA 348
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+KR F L++MY KCGE+ + + +F MP ++ VSW II ++G E
Sbjct: 349 LVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSE 408
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
F+ M KP ++TFL +L AC H G ++ I SM +YG+ P +EHY C+V
Sbjct: 409 VYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVV 468
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG DDA+ I + PF + +W +++ AC H N+++ AE+LL P +
Sbjct: 469 DMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTA 528
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+Y++ G WD +KV K ++G K G SWIE+
Sbjct: 529 AYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIEL 569
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 190/521 (36%), Gaps = 142/521 (27%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYG-----------LSQDIFTGNNLLSMYA 49
++ R L CG+ ++ G +LH ++K L + N+L+SMYA
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYA 68
Query: 50 DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
DA ++FDEM ++ VSW +++ A ++ A+ L+ ML + + ++
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFT 125
Query: 110 AVLKACSLSGDLDLG--RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
VL C+ +G L ++H + E + + N L+ Y +CGS ++F
Sbjct: 126 TVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGM- 184
Query: 166 NWAASAYGNVALWNSMLSG----------------------------------------- 184
A NV W +M+SG
Sbjct: 185 -----AEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCALLACARSLAA 239
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG- 241
G+QVH VK GFE + + L+D+Y KCG ++D L +F E D V T I+VG
Sbjct: 240 REGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGF 299
Query: 242 --------CFEC-----------------------------------------SCFTL-- 250
FE CF +
Sbjct: 300 AQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNT 359
Query: 251 ---SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+ LV+MYS C L E+ ++FD+ S N WNS+I+ + + E L
Sbjct: 360 YVCNGLVNMYSKCGELRESVRVFDEMPS------KNSVSWNSIIAAFARHGHGSEVYQLF 413
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL----- 362
+ + G TF S L AC S GL + + Y V +
Sbjct: 414 ESMKADGAKPTDVTFLSLLHAC-------SHVGSAKKGLEILNSMSSQYGVLPRMEHYAC 466
Query: 363 -IDLYARLGNVKSALELFHRLPKKD-VVAWSGLIMGCTKHG 401
+D+ R G + A P D + W L+ C+ HG
Sbjct: 467 VVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHG 507
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 351/678 (51%), Gaps = 41/678 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND------AHKLFDE 63
L+ C + +++K GK++HC +I+ + N+L++MY + D K+FD
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M RKN+V+W T+++ Y R A R + M+ V+P+ + V A S+S +
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISRSIKK 232
Query: 124 GRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ + + + EY D ++++ + MY + G + +R++FD + N+ +WN
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD------SCVERNIEVWN 286
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV---VSWT 236
+M+ G V C+ E ++ L ++ + E+ LA + V +
Sbjct: 287 TMI--GVYVQNDCL---VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 237 GIIVGCF-ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G + F E +++L+ MYS C K F + S +V WN+MIS +V
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCG---SVHKSFGVFLSMRER---DVVSWNTMISAFV 395
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N ++E + L+ + G ID T T+ L A NL N Q H ++ G + +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN--KEIGKQTHAFLIRQGIQFE 453
Query: 356 YIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ S LID+Y++ G ++ + +LF ++D W+ +I G T++G +L+FR M
Sbjct: 454 GM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ N N ++S+L CS + S+ GKQ+H F +++ ++ ++L+DMY K G I
Sbjct: 513 LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAI 572
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F ER+ V++T +I+G GQ+G + AI+ F M +S +KP+ ITF+ VLSAC
Sbjct: 573 KYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSAC 632
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD-KT 592
++GL++E IF M+ Y ++P EHY C+ D+LG+ G ++A + + + + +
Sbjct: 633 SYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE 692
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLA-TSPEDPSKY-VMLSNVYATLGMWDSLSKVRKA 650
+W S+L +C+ H +L ++E+L ++ S Y V+LSN+YA W S+ KVR+
Sbjct: 693 LWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752
Query: 651 GKKLG-EKKAGMSWIEVS 667
++ G +K+ G S IE++
Sbjct: 753 MREKGLKKEVGRSGIEIA 770
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 258/554 (46%), Gaps = 56/554 (10%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKAC 115
A +LFD + + V W T++ + N P+ A+ Y+ M + + + YS+ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--------LTRKLFDQYSNW 167
+ + +L G+ +H + R V+ N+L++MYV C + + RK+FD
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR- 176
Query: 168 AASAYGNVALWNSMLS----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
NV WN+++S G+ A C + G ++ M +K + +
Sbjct: 177 -----KNVVAWNTLISWYVKTGRNAEA-CRQFGI---------MMRMEVKPSPV----SF 217
Query: 224 FNFMPERDV---VSWTGIIVGC-------FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
N P + + + G + F +S+ + MY+ + +R++FD
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD-- 275
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSALKACINL 332
+ N+ +WN+MI YV N+ E+I L L I S + D T+ A A L
Sbjct: 276 ----SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q HG + + EL ++ ++L+ +Y+R G+V + +F + ++DVV+W+
Sbjct: 332 QQV--ELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++GL+ +L +M ++ ++++L S L + GKQ HAF +++G
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ E + + LIDMY K G I LF+ ERD +W +I G QNG ++
Sbjct: 450 IQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F++M++ ++PN +T +L AC G V+ + +Y L+ ++ +VD+
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYS 567
Query: 571 QAGCFDDAEQLIAE 584
+AG AE + ++
Sbjct: 568 KAGAIKYAEDMFSQ 581
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN--QFIISS 427
GN + A +LF +PK V W+ +I+G + L A L + M + N + SS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK------CGEIDDGLALFK 481
LK C+ +L+ GK VH ++ + SL++MY+ C E D +F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M ++VV+W +I + GR EA F M++ +KP+ ++F+ V A + +++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 542 AWTIFTSM 549
A + M
Sbjct: 233 ANVFYGLM 240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C Q S+ GK LH I+ L Q++F + L+ MY+ ++ A +F +
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N V++TTM+ Y + AI L+ M E G ++P+ + AVL ACS SG +D G
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESG-IKPDAITFVAVLSACSYSGLIDEGL 642
Query: 126 LIHERI 131
I E +
Sbjct: 643 KIFEEM 648
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 354/684 (51%), Gaps = 56/684 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIK------YGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
L+ C + I GK++H ++ G S+ ++ N+LL+MYA A +FD
Sbjct: 124 LKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVY--NSLLNMYASCQH-EYALNVFDV 180
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M R+N+V+W T++ ++ R A+ + +M+ SV P+ + + A S GD
Sbjct: 181 MRRRNVVAWNTLILSFVKMNRYPQAVEAFANMIN-QSVMPSPVTFVNLFPALSKLGDSRT 239
Query: 124 GRLIHERITREKLEY--DTVLMNTLLDMY--VKCGSLTRKLFDQYSNWAASAYGNVALWN 179
++ + + + +Y D ++++ + M+ V C R +FD+ N N +WN
Sbjct: 240 VKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLN------KNTEIWN 293
Query: 180 SMLSGGKQ----VHAFCV-KRGFEKE-----DVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+M+ Q V A V + E E DVTL S++ + +I F+
Sbjct: 294 TMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFV-- 351
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ S G ++ L+A++ MYS CN + + K+FD+ A + WN+
Sbjct: 352 --IKSLPGSLI-------IILNAVMVMYSRCNHVDTSLKVFDKMLERDAVS------WNT 396
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
+IS +V N +EEA+ L+ + IDS T T+ L A NL N Q H ++
Sbjct: 397 IISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNL--YVGKQTHAYLIR 454
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKHGLNSLAY 407
G + + + S LID+YA+ G++++A LF + +D W+ +I G T++GLN A
Sbjct: 455 RGIQFEGM-ESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAI 513
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LL + M+ N N ++S+L CS + S+ +Q+H F ++R EK TSL D Y
Sbjct: 514 LLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTY 573
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG I +F PE++ V++T +++ GQ+G K A+ + M++S ++P+ +TF+
Sbjct: 574 SKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFV 633
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+LSAC ++GLV+E IF SM+ + ++P +EHY C+ D+LG+ G +A + + +
Sbjct: 634 AILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGE 693
Query: 588 KPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPED--PSKYVMLSNVYATLGMWDSL 644
+ IW S+L +C H + +L +A++LL + +V+LSN+YA G W+ +
Sbjct: 694 DANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKV 753
Query: 645 SKVRKAGKKLG-EKKAGMSWIEVS 667
+VRK K+ G K+ G SW+E++
Sbjct: 754 DRVRKQMKEKGLHKETGCSWVEIA 777
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 156/620 (25%), Positives = 273/620 (44%), Gaps = 54/620 (8%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKAC 115
A L D + R + V W +++ + N P+ A+ LY M S + + +S+ LKAC
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 116 SLSGDLDLGRLIHERITREKLEYDT----VLMNTLLDMYVKCG-SLTRKLFDQYSNWAAS 170
+L+ D+ G+ IH R +T ++ N+LL+MY C +FD
Sbjct: 128 ALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHEYALNVFDVMRR---- 183
Query: 171 AYGNVALWNSMLSG-------GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
NV WN+++ + V AF + + VT +L K G+
Sbjct: 184 --RNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVK 241
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+ FM + + F +S+ + M+S+ + AR +FD+
Sbjct: 242 MFYGFMRK---------FGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDR------CLN 286
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSS--GMCIDSYTFTSALKACINLLNFNSRF 339
N +WN+MI YV N EAI + S G+C D T S L A L +
Sbjct: 287 KNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVC-DDVTLLSVLTAVSQLQQI--KL 343
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
A Q H ++ S I+ + ++ +Y+R +V ++L++F ++ ++D V+W+ +I +
Sbjct: 344 AEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQ 403
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+G + A +L +M ++ +++L S L +L GKQ HA+ ++RG + E +
Sbjct: 404 NGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGME 463
Query: 460 LTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+ LIDMY K G I LF+ +RD +W II G QNG ++AI ++M+
Sbjct: 464 -SYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQ 522
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+ PN +T +L AC G + A + + LE ++ + D + G
Sbjct: 523 NVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAISY 581
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS--PEDPSKYVMLSN-- 633
AE + P K + + +M+ H K + + +L + P+ + +LS
Sbjct: 582 AENVFLRTPEK-NSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACN 640
Query: 634 ----VYATLGMWDSLSKVRK 649
V L +++S+ KV K
Sbjct: 641 YSGLVDEGLQIFESMEKVHK 660
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 177/468 (37%), Gaps = 119/468 (25%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L Q + IK + H +IK I N ++ MY+ ++ + K+FD+M
Sbjct: 328 LLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKML 387
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ VSW T+++A+ N A+ L M + + +A+L A S +L +G+
Sbjct: 388 ERDAVSWNTIISAFVQNGFDEEALMLVCEM-QKQKFLIDSVTATALLSAASNLRNLYVGK 446
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
H + R ++++ + + L+DMY K GS+ LF+Q S+ + A WN++++
Sbjct: 447 QTHAYLIRRGIQFEG-MESYLIDMYAKSGSIRTAELLFEQ----NCSSDRDQATWNAIIA 501
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G +Q+H F ++R EK
Sbjct: 502 GYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEK 561
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
TSL D Y KCG I +F PE++ V++T
Sbjct: 562 NVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYT----------------------- 598
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
+M+ Y + + A+TL + SG+ D+
Sbjct: 599 -----------------------------TMMMCYGQHGMGKRALTLYDSMLRSGIRPDA 629
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVK 373
TF + L AC N++ L GL + E + + ++ D+ R+G V
Sbjct: 630 VTFVAILSAC----NYS---GLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVV 682
Query: 374 SALELFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
A E L + + W L+ C HG L + + ++N D
Sbjct: 683 EAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMD 730
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 15/248 (6%)
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF---I 424
R G AL L LP+ V W+ +I+G + L A LL+ M SN + F
Sbjct: 61 REGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKM-RSNSSCSTFDPYT 119
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR----GFEKEDITLTSLIDMYLKCGEIDDGLALF 480
SS LK C+ + GK +H+ ++ I SL++MY C + + L +F
Sbjct: 120 FSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-QHEYALNVF 178
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
M R+VV+W +I+ + R +A+ F MI + P+ +TF+ + A G
Sbjct: 179 DVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSR 238
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCM---VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+ M+ ++G + ++ + + + + GC D A +++ + + IW +M
Sbjct: 239 TVKMFYGFMR-KFG-DQYVSDVFVVSSAILMFSDVGCMDYA-RMVFDRCLNKNTEIWNTM 295
Query: 598 LKACETHN 605
+ A +N
Sbjct: 296 IVAYVQNN 303
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 212/684 (30%), Positives = 334/684 (48%), Gaps = 57/684 (8%)
Query: 24 SLHCRIIKYGL--SQDIFTGNNLLSMYA--DFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
SLH ++ L GN LL+ YA A ++ VS+ ++++A
Sbjct: 84 SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGD--LDLGRLIHE-RITREK 135
++ A+ ML G + + F +VL ACS L GD LGR H + R
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203
Query: 136 LE--YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS----GGKQ 187
L+ + N LL MY + G + + LF + + G+V WN+M+S GG+
Sbjct: 204 LDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRC 263
Query: 188 VHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
A V G + VT S + C ++ LAL M VV +
Sbjct: 264 AEAVEVLYDMVSLGVRPDGVTFASALP---ACSRLEM-LALGREM--HAVVLKDADLAA- 316
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+ F SALVDMY+ + AR++FD + + +WN+MI GY +EE
Sbjct: 317 ---NSFVASALVDMYAGNEKVASARRVFDMVPEPSR----QLGMWNAMICGYAQAGMDEE 369
Query: 303 AITLLSHIHSSGMCIDSYTFTSA-LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
A+ L S + + C S T S L AC F + A+ HG +V G + V +
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAM--HGYVVKRGMAGNRFVQNA 427
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-------- 413
L+D+YARLG + A +F + +DVV+W+ LI GC G + A+ L +M
Sbjct: 428 LMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPS 487
Query: 414 -INSNQD-------VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
++ ++ N + ++L C+ LA+ RGK++H + V+ E + ++L+D
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVD 547
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEI 524
MY KCG + A+F +P R+V++W +I+ G +G EA+A F EM PNE+
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TF+ L+AC H+GLV+ +F M+ ++G++P + + C+VD+LG+AG D+A +I
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667
Query: 585 M-PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
M P + + W+S+L AC H N +L + AE+L P + S YV+L N+Y+ GMWD
Sbjct: 668 MEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDK 727
Query: 644 LSKVRKAGKKLG-EKKAGMSWIEV 666
VR ++ G K+ G SWIE+
Sbjct: 728 SVAVRVRMRRQGVAKEPGCSWIEL 751
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +GK +H +++ L DI G+ L+ MYA L + +FD + R+N+
Sbjct: 511 LPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNV 570
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIH 128
++W ++ AY + + A+ L++ M G PN + A L ACS SG +D G L H
Sbjct: 571 ITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFH 630
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLSGGK 186
++ L ++D+ + G +L + YS + G V+ W+S+L +
Sbjct: 631 GMERDHGVKPTPDLHACVVDVLGRAG----RLDEAYSIITSMEPGEQQVSAWSSLLGACR 686
Query: 187 -----QVHAFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
++ +R FE E + L ++Y G D +A+ M + V G
Sbjct: 687 LHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPG 745
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 329/682 (48%), Gaps = 94/682 (13%)
Query: 25 LHCR-------IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
L+CR I+K D+ N ++S Y + +L A LFDEM +N VSW+ +++
Sbjct: 67 LNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALIS 126
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+++YG VE + + + +S + + + E L+
Sbjct: 127 G----------------LMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
L LL+ V+ +T F A G+ L G + VK GF
Sbjct: 171 ----LFFRLLESGVRPNDVT---FTSVVR-ACGELGDFGL-------GMSILGLVVKAGF 215
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E SLI + L+ GEID +F+ M +RDVVSWT A++D Y
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWT---------------AILDAY 260
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L EAR++FD+ N W++MI+ Y + EEA+ L S + G
Sbjct: 261 VETGDLREARRIFDEMPE------RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKP 314
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ F L A +L ++ + +HG + G + D +GS+LIDLY + G
Sbjct: 315 NISCFACTLSALASLRALSA--GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSL---------------------AYL-------- 408
+F + +K+VV W+ ++ G + +G YL
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKV 432
Query: 409 --LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+F ++ S Q N+ SSVL C+ +ASL +G VH +K G + + T+L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEIT 525
Y KCG+I +F+ MPE++ +SWT +I G ++G A E++ F+EM + S + PNE+
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L VL AC H GLV++ F SM+ YG++P +HY C+VDLL ++G +AE+ I +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF+P+ WA++L C+ + + K+ A++L + + + YV+LSN+YA+ G W +S
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 646 KVRKAGKKLGEKKA-GMSWIEV 666
+RK ++ G KK+ G SW+EV
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEV 694
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 73/358 (20%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R++ G ++H + K G+ +D+F G++L+ +Y +D +FD + KN+V W +MV
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 77 TAYTSNKR----------------PNWA---------------IRLYNHMLEYGSVEPNG 105
Y+ N R +W + ++N +L G PN
Sbjct: 390 GGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQT-PNK 448
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
+S+VL AC+ LD G +H +I + ++YD + L DMY KCG + ++++F++
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLK 213
N W M+ G G V + + E+ ++ L S++
Sbjct: 509 MPE------KNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH 562
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF--- 270
CG +D GL FN M + + G C +VD+ S L EA +
Sbjct: 563 CGLVDKGLWYFNSMEKVYGIKPKGKHYTC----------VVDLLSRSGRLYEAEEFIRTI 612
Query: 271 ---DQYSSWAASAYGNVALWNSMISG------YVLNEQNEEAITLLSHIH-SSGMCID 318
+ ++WAA G + I+ + L E N LLS+I+ S+G ID
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWID 670
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 185/462 (40%), Gaps = 92/462 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG+ G S+ ++K G + N+L+++ ++ A ++FD M ++++
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE-------------------------YGSVEPN 104
VSWT ++ AY A R+++ M E + +
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 105 GFMYSAVLKACSLSG-----DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-- 157
GF + AC+LS L G IH +T+ ++ D + ++L+D+Y KCG
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF-EKEDVTLTSLIDMYL 212
R +FD NV WNSM+ G G+ + EK D + ++J YL
Sbjct: 371 RLVFDLILE------KNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYL 424
Query: 213 KCGEIDDGLALFNFM------PERDVVSWTGIIVGC--------------------FECS 246
+ + + L +FN + P + +++ ++ C +
Sbjct: 425 ENEQCEKVLEVFNTLLVSGQTPNKS--TFSSVLCACASIASLDKGMNVHGKIIKLGIQYD 482
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +AL DMY+ C + ++++F++ N W MI G + E++ L
Sbjct: 483 IFVGTALTDMYAKCGDIGSSKQVFERMPE------KNEISWTVMIQGLAESGFAVESLIL 536
Query: 307 LSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN---- 361
+ +S + + S L AC S L GL + E Y +
Sbjct: 537 FEEMERTSEVAPNELMLLSVLFAC-------SHCGLVDKGLWYFNSMEKVYGIKPKGKHY 589
Query: 362 --LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++DL +R G + A E +P + + AW+ L+ GC K+
Sbjct: 590 TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKY 631
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 305/573 (53%), Gaps = 41/573 (7%)
Query: 107 MYSAVLKAC-SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQ 163
+YS++++ C + D+ ++ + R + L N L+D Y+KCGS+ RK+FD+
Sbjct: 79 LYSSLIQQCIGIKSITDITKIQSHALKRG---FHHSLGNKLIDAYLKCGSVVYARKVFDE 135
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKC 214
+ ++ WNSM++ G+ A V G ++ T +S+ +
Sbjct: 136 V------PHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDL 189
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G + +G +++G + F SALVDMY+ + +AR + DQ
Sbjct: 190 GLVHEG----------QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVV 239
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+V L+ ++I GY + ++ E++ + ++ G+ + YT +S L C NL +
Sbjct: 240 G------KDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
S +HGLIV +G E ++L+ +Y R G V +L++F + + V W+ +I
Sbjct: 294 LTS--GRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
+G ++G +A L FR M+ S+ N F +SSVL+ CS LA L +GKQ+HA +K G +
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ +LID Y KCG + ++F + E DVVS +I QNG EA+ F M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ L+PN +T+LGVLSAC +AGL+EE IF+S + +E +HY CMVDLLG+AG
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGR 531
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+AE LI ++ D IW ++L AC H + ++ + +++ +PED +V+LSN+
Sbjct: 532 LKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNL 590
Query: 635 YATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
YA+ G W + +++ A +++ KK MSW++V
Sbjct: 591 YASTGNWSKVIEMKSAMREMRLKKNPAMSWVDV 623
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 226/559 (40%), Gaps = 107/559 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C +SI + +K G + GN L+ Y S+ A K+FDE+ ++I
Sbjct: 84 IQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHI 141
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W +M+ +Y N R AI +Y M+ G + P+ F +S+V KA S G + G+ H
Sbjct: 142 VAWNSMIASYIRNGRSKEAIDIYQRMVPDG-ILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200
Query: 130 RITREKLEYDTVLMNT-LLDMYVKCGSL--TRKLFDQ---------------YSNWAASA 171
+ + V + + L+DMY K G + R + DQ YS+
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260
Query: 172 YGNVALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSL 207
++ ++ +M L+ G+ +H VK G E + TSL
Sbjct: 261 E-SLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSL 319
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ MY +CG +DD L +F + V+WT +IVG
Sbjct: 320 LTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGL------------------------- 354
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
V N + E A+ + S + +S+T +S L+
Sbjct: 355 ---------------------------VQNGREEIALLKFRQMLRSSITPNSFTLSSVLR 387
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC +L Q+H +++ G ++D VG+ LID Y + G+ + A +F+ L + DV
Sbjct: 388 ACSSLAMLEQ--GKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDV 445
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+ + +I ++G A LF M ++ + N VL C+ L G H F
Sbjct: 446 VSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG--CHIF 503
Query: 448 CVKRGFEKEDIT---LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
R ++T ++D+ + G + + L + DVV W ++ C +G
Sbjct: 504 SSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDV 563
Query: 505 KEAIAYFQEMIQSRLKPNE 523
+ A +I L P +
Sbjct: 564 EMAKRVMNRVID--LAPED 580
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 207/735 (28%), Positives = 337/735 (45%), Gaps = 108/735 (14%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H II G S ++F L++ YA + LF + K+I W +++ ++ SN
Sbjct: 59 FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 118
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVLM 143
A Y M S+ PN F V+ C+ + G IH ++ L ++ +
Sbjct: 119 YQRAFDFYLQMRASSSL-PNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 177
Query: 144 NTLLDMYVKCGSLTRK--LFDQYS-----NWAASAYGNV--------------------- 175
++ + MY KCG + +F + + W A G V
Sbjct: 178 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 237
Query: 176 ALWNSMLSG------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
+ ++ SG GK +H +K GF +V ++++ MY +CG ++
Sbjct: 238 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 297
Query: 224 FNFMPERDVVSWTGI------------------------------IVGC----------- 242
F + ++D++SWT I ++ C
Sbjct: 298 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 357
Query: 243 FECSCF--------------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
FE F T +AL+ MY L A K+F + + W+
Sbjct: 358 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED-------WS 410
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+MI GY Q E+ I+ L + G D + S + +C + N +H +
Sbjct: 411 TMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAIN--IGRSIHCYAI 468
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ + V ++L+D+Y + G+V + +FHR ++DV++W+ LI + G+ + A +
Sbjct: 469 KNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAII 528
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M+ N+ VL C+ LASL G+++H + + GFE T+LIDMY
Sbjct: 529 LFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYA 588
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCGE++ LF ERDV+ W +I G +G + A+ FQ M +S +KPN TFL
Sbjct: 589 KCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLS 648
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+LSAC H G V E +F M+ +YG+EP L+HY ++DLLG++G + AE L+ MP
Sbjct: 649 LLSACNHTGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPIT 707
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
PD T+W S+L AC+ HN ++ +A + + P++ Y++LS++Y+ LG WD + KVR
Sbjct: 708 PDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVR 767
Query: 649 KAGKKLG-EKKAGMS 662
KK G EK+AG S
Sbjct: 768 DMMKKRGVEKRAGWS 782
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 216/537 (40%), Gaps = 95/537 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+ + I + C ++ +GK LH +K G + +LSMY+ S +A++ F
Sbjct: 239 NYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF 298
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ +K+++SWT+++ ++ + + L+ M + + P+ + S +L S +
Sbjct: 299 CKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM-QASEIIPDEIVISCMLMGFGNSDRI 357
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY----SNWAAS--AYG 173
G+ H RI ++ + N LL MY K G L K+F + +W+ Y
Sbjct: 358 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYS 417
Query: 174 NVAL-------------------WNSMLSG------------GKQVHAFCVKRGFEKEDV 202
N+ NS++S G+ +H + +K +
Sbjct: 418 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 477
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
SL+DMY K G + +F+ +RDV+SW + L+ Y +
Sbjct: 478 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISW---------------NTLISSYKQSGI 522
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L EA LFD+ M+ V + T
Sbjct: 523 LAEAIILFDK-----------------MVKEKVYP--------------------NKVTC 545
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L AC +L + + ++H I +G+E + + + LID+YA+ G ++++ +LF+
Sbjct: 546 IIVLSACAHLASLDE--GEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNST 603
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++DV+ W+ +I HG A +F+ M SN N S+L C+ + G+
Sbjct: 604 EERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 663
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ K G E S+ID+ + G ++ AL MP D W ++ C
Sbjct: 664 HLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSAC 720
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG----------NVALWNSMISGYV 295
S +L+ N N + A KL Y+ A+ ++ LWNS+I +
Sbjct: 55 SLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHF 114
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YEL 354
N + A + +S + +T + C L+ FN + +HGL G +
Sbjct: 115 SNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNH--GMNIHGLTSKLGLFVG 172
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+ +GS+ I +Y++ G+V+SA +F + KDVV W+ LI+G ++ + +M
Sbjct: 173 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMH 232
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
N I S + C L +L GK +H +K GF ++ ++++ MY +CG +
Sbjct: 233 RIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPE 292
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+ F + ++D++SWT II + G E + F EM S + P+EI
Sbjct: 293 EAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIV 343
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
DS+ + L + + N + LQ H LI+T+G + + L+ YA +
Sbjct: 34 DSHYPNNCLHSFFSKPNLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTH 93
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
LF + KD+ W+ +I +G A+ + M S+ NQF + V+ C+ L
Sbjct: 94 LFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMM 153
Query: 438 LRRGKQVHAFCVKRG-FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
G +H K G F +S I MY KCG ++ +F + +DVV+WT +IV
Sbjct: 154 FNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIV 213
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
G QN + + EM + PN T AC
Sbjct: 214 GYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQAC 250
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 329/682 (48%), Gaps = 94/682 (13%)
Query: 25 LHCR-------IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
L+CR I+K D+ N ++S Y + +L A LFDEM +N VSW+ +++
Sbjct: 67 LNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALIS 126
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+++YG VE + + + +S + + + E L+
Sbjct: 127 G----------------LMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
L LL+ V+ +T F A G+ L G + VK GF
Sbjct: 171 ----LFFRLLESGVRPNDVT---FTSVVR-ACGELGDFGL-------GMSILGLVVKAGF 215
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E SLI + L+ GEID +F+ M +RDVVSWT A++D Y
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWT---------------AILDAY 260
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L EAR++FD+ N W++MI+ Y + EEA+ L S + G
Sbjct: 261 VETGDLREARRIFDEMPE------RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKP 314
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ F L A +L ++ + +HG + G + D +GS+LIDLY + G
Sbjct: 315 NISCFACTLSALASLRALSA--GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSL---------------------AYL-------- 408
+F + +K+VV W+ ++ G + +G YL
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKV 432
Query: 409 --LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+F ++ S Q N+ SSVL C+ +ASL +G VH +K G + + T+L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEIT 525
Y KCG+I +F+ MPE++ +SWT +I G ++G A E++ F+EM + S + PNE+
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L VL AC H GLV++ F SM+ YG++P +HY C+VDLL ++G +AE+ I +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF+P+ WA++L C+ + + K+ A++L + + + YV+LSN+YA+ G W +S
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 646 KVRKAGKKLGEKKA-GMSWIEV 666
+RK ++ G KK+ G SW+EV
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEV 694
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 186/462 (40%), Gaps = 92/462 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG+ G S+ ++K G + N+L+++ ++ A ++FD M ++++
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE-------------------------YGSVEPN 104
VSWT ++ AY A R+++ M E + +
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 105 GFMYSAVLKACSLSG-----DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-- 157
GF + AC+LS L G IH +T+ ++ D + ++L+D+Y KCG
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF-EKEDVTLTSLIDMYL 212
R +FD NV WNSM+ G G+ + EK DV+ ++I YL
Sbjct: 371 RLVFDLILE------KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYL 424
Query: 213 KCGEIDDGLALFNFM------PERDVVSWTGIIVGC--------------------FECS 246
+ + + L +FN + P + +++ ++ C +
Sbjct: 425 ENEQCEKVLEVFNTLLVSGQTPNKS--TFSSVLCACASIASLDKGMNVHGKIIKLGIQYD 482
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +AL DMY+ C + ++++F++ N W MI G + E++ L
Sbjct: 483 IFVGTALTDMYAKCGDIGSSKQVFERMPE------KNEISWTVMIQGLAESGFAVESLIL 536
Query: 307 LSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN---- 361
+ +S + + S L AC S L GL + E Y +
Sbjct: 537 FEEMERTSEVAPNELMLLSVLFAC-------SHCGLVDKGLWYFNSMEKVYGIKPKGKHY 589
Query: 362 --LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++DL +R G + A E +P + + AW+ L+ GC K+
Sbjct: 590 TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKY 631
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 73/358 (20%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R++ G ++H + K G+ +D+F G++L+ +Y +D +FD + KN+V W +MV
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 77 TAYTSNKRP----------------NWA---------------IRLYNHMLEYGSVEPNG 105
Y+ N R +W + ++N +L G PN
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT-PNK 448
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
+S+VL AC+ LD G +H +I + ++YD + L DMY KCG + ++++F++
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLK 213
N W M+ G G V + + E+ ++ L S++
Sbjct: 509 MPE------KNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH 562
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF--- 270
CG +D GL FN M + + G C +VD+ S L EA +
Sbjct: 563 CGLVDKGLWYFNSMEKVYGIKPKGKHYTC----------VVDLLSRSGRLYEAEEFIRTI 612
Query: 271 ---DQYSSWAASAYGNVALWNSMISG------YVLNEQNEEAITLLSHIH-SSGMCID 318
+ ++WAA G + I+ + L E N LLS+I+ S+G ID
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWID 670
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/683 (27%), Positives = 321/683 (46%), Gaps = 90/683 (13%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+ + + K G +Q ++ L Y + A LF+EM R+++VSW ++ Y+
Sbjct: 71 EANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYS 130
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
N A+ ++ ML G P ++ +C + G+ IH + L+ D
Sbjct: 131 RNGYDYDALEVFVQMLREG-FPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDC 189
Query: 141 VLMNTLLDMYVKCGSLT------RKLFDQYS---NWAASAYGNVALWN------------ 179
+ N L MY KC L ++F++ N AYG L++
Sbjct: 190 RVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKE 249
Query: 180 ----------SMLSGGKQV---HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
S+LS + H + +K GF + +TSL+ Y CG I+ L+N
Sbjct: 250 RVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNL 309
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
MP+R++VS L+A++ Y+ GN+ L
Sbjct: 310 MPQRNLVS---------------LTAMISGYAE---------------------KGNMGL 333
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
+ + + +A+ ++S +H TF + L +H
Sbjct: 334 VVECFTQMLQLKMKPDAVAMVSILHG----FTDPTFIGS--------------GLGIHAY 375
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ +G D +V + LI +Y++ G++++ LF + +K +++W+ +I C + G S A
Sbjct: 376 GLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDA 435
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF M + I+S+L CS + L+ G+++H + ++ + ED T+L+DM
Sbjct: 436 MELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDM 495
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+KCG ++ +FK + E + +W +I G G +G A++ + EM + LKP+ ITF
Sbjct: 496 YIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITF 555
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
LGVLSAC H GLV E F SM+ ++G+ P L+H CMVDLL +AG ++A + M
Sbjct: 556 LGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNME 615
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
+PD IW ++L +C H KL +A++LL YV++SN+YA+ G WD +++
Sbjct: 616 VEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVAR 675
Query: 647 VRKAGKKL-GEKKAGMSWIEVSS 668
VRK K G+ +G+S IEVSS
Sbjct: 676 VRKMMKDTGGDGSSGISLIEVSS 698
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 206/543 (37%), Gaps = 115/543 (21%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R +V + CG+ I QGK++H IK GL D N L SMYA L A LF+E
Sbjct: 155 RTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEE 214
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+ K VSW TM+ AY N + A+ ++ M + VE N Y ++ S + LD
Sbjct: 215 IFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQM-QKERVEVN---YVTIISLLSANAHLD- 269
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGS-----LTRKLFDQYSNWAASAY------ 172
H + + D ++ +L+ Y CG+ L L Q + + +A
Sbjct: 270 --STHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAE 327
Query: 173 -GNVAL----WNSML------------------------SGGKQVHAFCVKRGFEKEDVT 203
GN+ L + ML G +HA+ +K G + +
Sbjct: 328 KGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLV 387
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ LI MY K G+I+ +LF+ M E+ ++SW +I C +
Sbjct: 388 VNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVG----------------- 430
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ +A+ L + G D+ T
Sbjct: 431 -----------------------------------RTSDAMELFCQMRMYGHSPDAITIA 455
Query: 324 SALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L C + L F R +H ++ + +++ + + L+D+Y + G ++SA +F
Sbjct: 456 SLLAGCSEVGFLQFGER----LHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKS 511
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ + + W+ +I G G A + +M ++ VL C+ + G
Sbjct: 512 IKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEG 571
Query: 442 KQV-----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
K+ F + G + ++D+ + G +++ + K M E D W ++
Sbjct: 572 KRYFRSMREDFGMIPGLQHN----ACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALL 627
Query: 496 VGC 498
C
Sbjct: 628 TSC 630
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 162/445 (36%), Gaps = 82/445 (18%)
Query: 167 WAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
W A G AL + Q+ K GF + T+ +D Y K G I LF
Sbjct: 54 WVKFAVGTRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEE 113
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
MP RDVVSW +I G YS +A ++F Q
Sbjct: 114 MPRRDVVSWNALICG---------------YSRNGYDYDALEVFVQMLREGFPP------ 152
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGM-------CIDSYTFTSALKACINLLNFNSRF 339
+ G V + + I IH G+ C TS C +
Sbjct: 153 CQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCAD-------- 204
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
LQ ++ +E + + +I Y + G A+ +F ++ K+ V
Sbjct: 205 -LQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERV------------ 251
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+VN I S+L + L S H + +K GF +
Sbjct: 252 -------------------EVNYVTIISLLSANAHLDS------THCYVIKTGFATDASV 286
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+TSL+ Y CG I+ L+ MP+R++VS T +I G + G + F +M+Q ++
Sbjct: 287 ITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKM 346
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD-LLGQAGCFDDA 578
KP+ + + +L + I YGL+ L +V+ L+ F D
Sbjct: 347 KPDAVAMVSILHGFTDPTFIGSGLGIHA-----YGLKTGLCADCLVVNGLISMYSKFGDI 401
Query: 579 EQLIAEMPFKPDKTI--WASMLKAC 601
E + + +K + W S++ AC
Sbjct: 402 ETVFSLFSEMGEKQLISWNSVISAC 426
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L C + ++ G+ LH +++ L + F L+ MY L A ++F
Sbjct: 450 DAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVF 509
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ + +W TM++ Y + + A+ Y+ M E G ++P+ + VL AC+ G
Sbjct: 510 KSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQG-LKPDRITFLGVLSACTHGG 566
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 260/470 (55%), Gaps = 54/470 (11%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ-----YSSWAA--SAYGNVALWN 288
+ II F+ S + L+D+Y C ++ +A +LFD+ + SWA+ +A+ +
Sbjct: 27 SQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPR 86
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+S +LN T+ +H G+ D + F ++AC +L R QVH +
Sbjct: 87 RTLS--MLN-------TMFTH---DGLQPDHFVFACIVRACSSLGYL--RLGKQVHARFM 132
Query: 349 TSGYELDYIVGSNLIDLY-------------------------------ARLGNVKSALE 377
S + D +V S+LID+Y AR G A++
Sbjct: 133 LSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLA 436
LF + P +++ +W+ LI G + G ++ LF +M D V+ ++SSV+ C+ LA
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
L GKQ+H + GFE +L+DMY KC +I +F MP +DV+SWT IIV
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G+A+EA+ + EM+ SR+KPNE+TF+G+L AC HAGLV +F SM +Y +
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P L+HY C++DLL ++G D+AE L+ ++PFKPD+ WAS+L AC HNN ++ IA++
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+L PEDPS Y++LSNVYA MW S+SKVRK + K+ G S I+
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 218/472 (46%), Gaps = 73/472 (15%)
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WAA--SAYG---- 173
+H +I + + ++L NTLLD+Y KCG + + +LFD+ N WA+ +A+
Sbjct: 25 LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84
Query: 174 ---NVALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLT 205
+++ N+M + GKQVHA + F ++V +
Sbjct: 85 PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKS 144
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
SLIDMY KCG+ DD A+F+ + ++ VSWT +I G Y+ CE
Sbjct: 145 SLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG---------------YARSGRKCE 189
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM-CIDSYTFTS 324
A LF Q + N+ W ++ISG + + + +L + + G+ +D +S
Sbjct: 190 AMDLFLQ------APVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSS 243
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
+ C NL Q+HGL++ G+E + + L+D+YA+ ++ +A ++F+R+P+
Sbjct: 244 VVGGCANLALLE--LGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
KDV++W+ +I+G +HG A L+ +M+ S N+ +L CS + RG+++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361
Query: 445 -HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ T L+D+ + G +D+ L +P + D +W ++ C ++
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421
Query: 503 RAKEAIAYFQEMIQSRLKPNE----ITFLGVLSACRHAGLVEEAWTIFTSMK 550
+ + ++ LKP + I V + G V + + +SM+
Sbjct: 422 NLEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 199/445 (44%), Gaps = 70/445 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
M++ + L+ C +R+S LH +IIK G + N LL +Y + A +L
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM ++ VSW +++TA+ P + + N M + ++P+ F+++ +++ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L LG+ +H R D V+ ++L+DMY KCG R +FD + N W
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSI------LFKNSVSW 174
Query: 179 NSMLSG----GKQVHAF-CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER--- 230
SM+SG G++ A + + + T+LI ++ G +LFN M
Sbjct: 175 TSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGID 234
Query: 231 --DVVSWTGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARK 268
D + + ++ GC FE F +ALVDMY+ C+ + A+
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F + +V W S+I G + + EEA+TL + S + + TF L A
Sbjct: 295 IFYRMPR------KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYA 348
Query: 329 CINLLNFNSRFALQVHGLIVTSGYEL------DYIVGSN------LIDLYARLGNVKSAL 376
C H +V+ G EL DY + + L+DL +R G++ A
Sbjct: 349 C-------------SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAE 395
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKH 400
L ++P K D W+ L+ C +H
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRH 420
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
A ++H I+ +G++ ++ + L+D+Y + G + AL+LF +P +D V+W+ ++ K
Sbjct: 22 AGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNK 81
Query: 400 HGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ + M + + F+ + +++ CS L LR GKQVHA + F +++
Sbjct: 82 ALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEV 141
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+SLIDMY KCG+ DD A+F + ++ VSWT +I G ++GR EA+ F +Q+
Sbjct: 142 VKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLF---LQAP 198
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ N ++ ++S +G ++++F M+ E
Sbjct: 199 VR-NLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L++C+ S ++H+ +K GF+K + +L+D+Y KCG I L LF MP RD
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VSW I+ + + ++ M L+P+ F ++ AC G + +
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + + ++D+ + G DDA + + FK + W SM+
Sbjct: 130 RFMLSFFCDDEVVK-SSLIDMYTKCGQPDDARAVFDSILFK-NSVSWTSMI 178
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 209/715 (29%), Positives = 326/715 (45%), Gaps = 116/715 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V+ L C + SI Q LH + +K GL+ D F L +YA + SL AHKLF+E
Sbjct: 7 LVKLLETCCSKISIPQ---LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEE-- 61
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
T T Y W L ++ LE VE + +
Sbjct: 62 -------TPCKTVYL------WNALLRSYFLEGKWVETLSLFH----------------Q 92
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ + IT E+ + TV + C L + L G
Sbjct: 93 MNADAITEERPDNYTVSI-----ALKSCSGLQK-----------------------LELG 124
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---- 241
K +H F K+ + + ++LI++Y KCG+++D + +F P++DVV WT II G
Sbjct: 125 KMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQN 184
Query: 242 --------------------------------CFECSCFTLS----ALVDMYSNCNVLCE 265
C + S F L V LC
Sbjct: 185 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 244
Query: 266 ARKLFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
A + + Y + Y ++ W+SM++ Y N A+ L + + +
Sbjct: 245 ANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRI 304
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
++ T SAL+AC + N +H L V G+ELD V + L+D+Y + + K+A
Sbjct: 305 ELNRVTVISALRACASSSNLEE--GKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNA 362
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++LF+R+PKKDVV+W+ L G + G+ + +F +M++ + + +L S L
Sbjct: 363 IDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSEL 422
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+++ +HAF K GF+ + SLI++Y KC ID+ +FK M +DVV+W+ II
Sbjct: 423 GIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSII 482
Query: 496 VGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
G +G+ +EA+ F +M S +KPN++TF+ +LSAC HAGL+EE +F M EY
Sbjct: 483 AAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQ 542
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
L P+ EHY MVDLLG+ G D A +I EMP + +W ++L AC H N K+ + A
Sbjct: 543 LMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAA 602
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
L P Y +LSN+Y W +K+R K+ KK G S +E+ +
Sbjct: 603 LNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKN 657
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 5/189 (2%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V+ L + ++Q LH + K G + F G +L+ +YA +S+++A+K+F
Sbjct: 408 DAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVF 467
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M RK++V+W++++ AY + + A++L+ M + V+PN + ++L ACS +G +
Sbjct: 468 KGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLI 527
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ G ++ H + +L +T ++D+ + G L + L D + A +V W +
Sbjct: 528 EEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKAL-DMINEMPMQAGPHV--WGA 584
Query: 181 MLSGGKQVH 189
+L G ++H
Sbjct: 585 LL-GACRIH 592
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 278/529 (52%), Gaps = 22/529 (4%)
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED 201
N ++ Y KCG + K+F + S A + WN+M++G + F F K
Sbjct: 38 NNIISGYAKCGEIRIASKMFGETSQRDAVS------WNTMIAGFVNLGNFETALEFLKSM 91
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
+D Y G I G+A ++ V + +G +E + F SAL+DMY+ C
Sbjct: 92 KRYGFAVDGY-SFGSILKGVACVGYVEVGQQVHSMMVKMG-YEGNVFAGSALLDMYAKCE 149
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +A ++F + N WN++ISGY A LL + G+ ID T
Sbjct: 150 RVEDAFEVFKSIN------IRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH- 380
F A + + QVH IV G D V + +I Y+ G+++ A +F
Sbjct: 204 F--APLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 381 RLPKKDV--VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
+ +D+ V+W+ ++ G ++ GL+ A F +M + ++ + S+VL+ CS LA+L
Sbjct: 262 AIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 321
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
+ G+QVH +K GFE +SLI MY KCG I+D F P+ ++W +I G
Sbjct: 322 QLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGY 381
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q+GR K A+ F M R+K + ITF+ VL+AC H GLVEE W+ SM+ +YG+ P
Sbjct: 382 AQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPR 441
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+EHY CM+DLLG+AG D+A+ LI MPF+PD +W ++L AC T + +L S +A LL
Sbjct: 442 MEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL 501
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
PE+ YV+LS+++ L W+ + +++ K+ G KK G SWIEV
Sbjct: 502 ELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEV 550
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 240/508 (47%), Gaps = 32/508 (6%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HC IK G + I+T NN++S YA + A K+F E ++++ VSW TM+ + +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A+ M YG +G+ + ++LK + G +++G+ +H + + E + +
Sbjct: 82 ETALEFLKSMKRYG-FAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
LLDMY KC ++ D + + + N WN+++SG QV RG T
Sbjct: 141 LLDMYAKC----ERVEDAFEVFKSINIRNSVTWNALISGYAQVG----DRG------TAF 186
Query: 206 SLID-MYLKCGEIDDG-------LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
L+D M L+ EIDDG L + + I+ +A++ Y
Sbjct: 187 WLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S C + +A ++FD + +V+ WNS+++G+ + +E+A+ ++ S + I
Sbjct: 247 SECGSIEDAERVFD--GAIETRDLDHVS-WNSILTGFSQSGLSEDALKFFENMRSQYVVI 303
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D Y F++ L++C +L + QVH L++ SG+E + V S+LI +Y++ G ++ A +
Sbjct: 304 DHYAFSAVLRSCSDLATL--QLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARK 361
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
F PK +AW+ LI G +HG +A LF M + ++ +VL CS +
Sbjct: 362 SFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGL 421
Query: 438 LRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
+ G + + G +ID+ + G +D+ AL + MP E D + W ++
Sbjct: 422 VEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 481
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
C G + A +++ L+P E
Sbjct: 482 GACRTCGDIELASQVASHLLE--LEPEE 507
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 195/525 (37%), Gaps = 133/525 (25%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++ G+ +H ++K G ++F G+ LL MYA + DA ++F + +N V+W +++
Sbjct: 116 VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISG 175
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y A L + M E VE + ++ +L L +H +I + L
Sbjct: 176 YAQVGDRGTAFWLLDCM-ELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLAS 234
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------ 184
DT + N ++ Y +CGS+ ++FD +V+ WNS+L+G
Sbjct: 235 DTTVCNAIITAYSECGSIEDAERVFD--GAIETRDLDHVS-WNSILTGFSQSGLSEDALK 291
Query: 185 --------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
G+QVH +K GFE +SLI MY
Sbjct: 292 FFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYS 351
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG I+D F+ P+ ++W +I G
Sbjct: 352 KCGVIEDARKSFDATPKDSSIAWNSLIFG------------------------------- 380
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+A G +AL L + + +D TF + L AC
Sbjct: 381 ---YAQHGRGKIAL------------------DLFFLMKDRRVKLDHITFVAVLTAC--- 416
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KK 385
S L G E DY + +IDL R G + A L +P +
Sbjct: 417 ----SHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEP 472
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQFIISSV---LKVCSCLASLRR 440
D + W L+ C G LA + + + + ++SS+ L+ + AS++R
Sbjct: 473 DAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKR 532
Query: 441 ------GKQVHAFC---VK---RGFEKEDITLTSLIDMYLKCGEI 473
K+V + VK R F ED + + ++YL+ GE+
Sbjct: 533 LMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGEL 577
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
+FT+ +A +N H L + SG +N+I YA+ G ++ A ++F
Sbjct: 11 SFTALYRASVN------------HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG 58
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
++D V+W+ +I G G A + M V+ + S+LK +C+ +
Sbjct: 59 ETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEV 118
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+QVH+ VK G+E ++L+DMY KC ++D +FK + R+ V+W +I G Q
Sbjct: 119 GQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ 178
Query: 501 NG 502
G
Sbjct: 179 VG 180
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C +++ G+ +H ++K G + F ++L+ MY+ + DA K FD + +
Sbjct: 312 LRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS 371
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++W +++ Y + R A+ L+ +++ V+ + + AVL ACS G ++ G
Sbjct: 372 IAWNSLIFGYAQHGRGKIALDLF-FLMKDRRVKLDHITFVAVLTACSHIGLVEEG 425
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S +L R H +K G T ++I Y KCGEI +F +RD VSW
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G G + A+ + + M + + +F +L G VE + SM +
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH-SMMVK 128
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G E ++ ++D+ + +DA ++ + + T W +++
Sbjct: 129 MGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALI 173
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 338/682 (49%), Gaps = 54/682 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + AL+ C R +K+G +H G + + N ++ MY ++A +
Sbjct: 76 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRP-NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F+ + ++VSW T+++ + N+ N+ +R+ + V + F YS L C S
Sbjct: 134 FENLVDPDVVSWNTILSGFDDNQIALNFVVRM-----KSAGVVFDAFTYSTALSFCVGSE 188
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
LG + + + LE D V+ N+ + MY + GS R++FD+ S + ++
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS------FKDMIS 242
Query: 178 WNSMLSGGKQVHAF----------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WNS+LSG Q F ++ G E + V+ TS+I C E D LA
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC--CHETDLKLA----- 295
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
R + I +E + L+ YS C VL + +F Q S NV W
Sbjct: 296 --RQIHGLC--IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER------NVVSW 345
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MIS ++A+++ ++ G+ + TF + A N + L++HGL
Sbjct: 346 TTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV--KCNEQIKEGLKIHGLC 398
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G+ + VG++ I LYA+ ++ A + F + +++++W+ +I G ++G + A
Sbjct: 399 IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 458
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLA--SLRRGKQVHAFCVKRGFEKEDITLTSLID 465
+F N++ SVL + S+++G++ HA +K G + ++L+D
Sbjct: 459 KMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G ID+ +F M +++ WT II +G + + F +MI+ + P+ +T
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL+AC G+V++ + IF M Y LEP EHY CMVD+LG+AG +AE+L++E+
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P P +++ SML +C H N K+ + +AE + PE YV + N+YA WD +
Sbjct: 638 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 697
Query: 646 KVRKAGKKLG-EKKAGMSWIEV 666
++RKA +K K+AG SWI+V
Sbjct: 698 EIRKAMRKKNVSKEAGFSWIDV 719
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 286/598 (47%), Gaps = 84/598 (14%)
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFC 192
+T L+NTLL Y + GSL R++FD + N +N++LS G+ A
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFD------GMPHRNTFSYNALLSACARLGRADDALA 102
Query: 193 VKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGCFE--- 244
+ D + +++ + G D L M D V S+ + C
Sbjct: 103 LFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKA 162
Query: 245 -----------------CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
+ +ALVDMY+ C EA+K+FD A N+ W
Sbjct: 163 SRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFD------AMPERNIVSW 216
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
NS+I+ Y N +EA+ L + G D T S + AC L R QVH +
Sbjct: 217 NSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAA--GREGRQVHTRM 274
Query: 348 VTSG-YELDYIVGSNLIDLYARLG-------------------------------NVKSA 375
V S + D ++ + L+D+YA+ G NV A
Sbjct: 275 VKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDA 334
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F ++ +K+VVAW+ LI + A LF + + + +VL C+ L
Sbjct: 335 QAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANL 394
Query: 436 ASLRRGKQVHAFCVKRGF------EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
A+L+ G+Q H +K GF E + SL+DMYLK G I DG +F+ M RD V
Sbjct: 395 ANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNV 454
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +IVG QNGRAK+A+ F+ M+ S +P+ +T +GVLSAC H+GLV+E F SM
Sbjct: 455 SWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSM 514
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G+ P +HY CM+DLLG+AG + E+LI MP +PD +WAS+L AC H N +
Sbjct: 515 TEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDM 574
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A +L P++ YV+LSN+YA LG W + +VR++ K G K+ G SWIE+
Sbjct: 575 GEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEI 632
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 211/498 (42%), Gaps = 92/498 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C ++ + G+ +H + K D++ G L+ MYA +A K+FD M +N
Sbjct: 153 ALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERN 212
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
IVSW +++T Y N + A+ L+ M++ G V P+ ++V+ AC+ GR +H
Sbjct: 213 IVSWNSLITCYEQNGPVDEALALFVRMMKDGFV-PDEVTLASVMSACAGLAAGREGRQVH 271
Query: 129 ERITR-EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
R+ + ++ D VL N L+DMY KCG W A
Sbjct: 272 TRMVKSDRFREDMVLNNALVDMYAKCG----------RTWEAK----------------- 304
Query: 188 VHAFCV-KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
CV R + V+ TS+I Y K + D A+F M E++VV+W
Sbjct: 305 ----CVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAW----------- 349
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
NVL I+ Y N + EEA+ L
Sbjct: 350 --------------NVL---------------------------IATYAHNSEEEEALRL 368
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH----GLIVTSGYELDYIVGSNL 362
+ + YT+ + L AC NL N VH G SG E D VG++L
Sbjct: 369 FVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSL 428
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+Y + G++ ++F R+ +D V+W+ +I+G ++G A LLF M+ SN+ +
Sbjct: 429 VDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDS 488
Query: 423 FIISSVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ VL C ++ G++ + G T +ID+ + G + + L +
Sbjct: 489 VTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIE 548
Query: 482 FMP-ERDVVSWTGIIVGC 498
MP E D V W ++ C
Sbjct: 549 NMPMEPDAVLWASLLGAC 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 207/472 (43%), Gaps = 62/472 (13%)
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F E L +L+ Y + G + D +F+ MP R+ S+ ++ C A +
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSAC---------ARLGR 96
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+ L A DQ S +N++++ + + +A+ L+ +H+
Sbjct: 97 ADDALALFGAIPDPDQCS------------YNAVVAALAQHGRGGDALRFLAAMHADDFV 144
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+++Y+F SAL AC + SR QVH L+ S + D +G+ L+D+YA+ + A
Sbjct: 145 LNAYSFASALSACAS--EKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQ 202
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
++F +P++++V+W+ LI ++G A LF M+ ++ ++SV+ C+ LA
Sbjct: 203 KVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLA 262
Query: 437 SLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGE----------------------- 472
+ R G+QVH VK +ED+ L +L+DMY KCG
Sbjct: 263 AGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMI 322
Query: 473 --------IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
+ D A+F M E++VV+W +I N +EA+ F + + + P
Sbjct: 323 TGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHY 382
Query: 525 TFLGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
T+ VL+AC G + + + G E + +VD+ + G D
Sbjct: 383 TYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGA 442
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
++ M + D W +M+ + K ++ E++L ++ E P M+
Sbjct: 443 KVFERMAAR-DNVSWNAMIVGYAQNGRAKDALLLFERMLCSN-ERPDSVTMI 492
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 194/663 (29%), Positives = 315/663 (47%), Gaps = 40/663 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ Q H +II GL D+ T L + +++ A LF + ++ + ++
Sbjct: 22 TLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIR 81
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
A++ N P+ A+ LY H+ + +EP+ F Y+ V+ S G L
Sbjct: 82 AFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFG 138
Query: 138 YDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---- 191
D + + ++ Y K + RK+FD + LWN+M+SG + F
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLER------DTVLWNTMVSGLVKNSCFDEAI 192
Query: 192 -----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
VK G + T+ +++ + ++ G+ + + VG F
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMG----------IQCLAMKVG-FHSH 241
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ ++ L +YS C + AR LF Q ++ +N+MISGY N + E ++ L
Sbjct: 242 AYVITGLACLYSKCGEIETARLLFGQIGQ------PDLVSYNAMISGYTCNNETESSVRL 295
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ SG ++S + + + + +HG SG + V + L +Y
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLH--LTRCIHGFCTKSGVVSNSSVSTALTTVY 353
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+RL ++SA LF +K + +W+ +I G ++GL A LF++M N ++
Sbjct: 354 SRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVT 413
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+L C+ L +L GK VH + FE T+LIDMY KCG I + LF MPE+
Sbjct: 414 SILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK 473
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+ V+W +I G G +G EA+ F EM+ SR+ P +TFL VL AC HAGLV E IF
Sbjct: 474 NAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIF 533
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
SM ++G EP EHY CMVDLLG+AG D A I +MP +P +W ++L AC H +
Sbjct: 534 RSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKD 593
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
L + +++L P++ YV+LSN+Y+ + + VR K+ K G + IE
Sbjct: 594 ANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIE 653
Query: 666 VSS 668
V++
Sbjct: 654 VAN 656
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 165/457 (36%), Gaps = 113/457 (24%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L + + + G + C +K G + L +Y+ + A LF
Sbjct: 206 DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLF 265
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ + ++VS+ M++ YT N ++RL+ +L G + N ++ G L
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE-KVNSSSIVGLIPVFFPFGHL 324
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
L R IH T+ + ++ + L +Y + + R LFD+ S+ ++A WN
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDE------SSEKSLASWN 378
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+M+SG GK VH +
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
FE T+LIDMY KCG I + LF+ MPE++ V+W +I G
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISG-------------- 484
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y L+ EA+ L + + S +
Sbjct: 485 --------------------------------------YGLHGYGHEALNLFNEMLHSRV 506
Query: 316 CIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
TF S L AC + + + F VH G+E + ++DL R GN+
Sbjct: 507 SPTGVTFLSVLYACSHAGLVREGDEIFRSMVH----DHGFEPLPEHYACMVDLLGRAGNL 562
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYL 408
AL+ ++P + W L+ C H +LA L
Sbjct: 563 DKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARL 599
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 288/576 (50%), Gaps = 39/576 (6%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
FM +VLKAC LG+ IH + ++ L+ D + N L+ MY +C + R +FD+
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKE---------DVTLTSLIDMYLKC 214
+V W++M+ + F + +E +V + S+++++
Sbjct: 155 MME------RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADT 208
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
+ G A+ ++ G+ T +AL+DMY+ C L AR+LF+ +
Sbjct: 209 ANMRMGKAMHAYVIRNSNNEHMGVP---------TTTALLDMYAKCGHLGLARQLFNGLT 259
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
V W +MI+G + + + EE L + + + T S + C
Sbjct: 260 Q------KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVEC----G 309
Query: 335 FNSRFAL--QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
F L Q+H I+ +G+ + + + L+D+Y + ++++A LF +DV+ W+
Sbjct: 310 FTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTA 369
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
++ + A+ LF M S + I S+L +C+ +L GK VH++ K
Sbjct: 370 MLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER 429
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E + I T+L+DMY KCG+I+ LF RD+ W II G +G +EA+ F
Sbjct: 430 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 489
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
EM + +KPN+ITF+G+L AC HAGLV E +F M +GL P +EHY CMVDLLG+A
Sbjct: 490 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 549
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G D+A ++I MP KP+ +W +++ AC H N +L + A QLL PE+ V++S
Sbjct: 550 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 609
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
N+YA W + VRK K +G KK G S IEV+
Sbjct: 610 NIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVN 645
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 224/543 (41%), Gaps = 119/543 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CGQ + GK +H ++K GL +D+F GN L+ MY + + A +FD+M +++
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+TM+ + + NK + A+ L M + V P+ +++ + + ++ +G+ +H
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREM-NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 130 RITRE-KLEYDTVLMNT-LLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+ R E+ V T LLDMY KCG L R+LF+ + V W +M++G
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ------KTVVSWTAMIAGC 273
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GKQ+HA+ ++ GF
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
T+L+DMY KC +I + ALF+ RDV+ WT A++ Y+ N
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWT---------------AMLSAYAQAN 378
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ +A LFDQ + +SG+ T
Sbjct: 379 CIDQAFNLFDQ-------------------------------------MRTSGVRPTKVT 401
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L C + VH I E+D I+ + L+D+YA+ G++ +A LF
Sbjct: 402 IVSLLSLCAVAGALD--LGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 459
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+D+ W+ +I G HG A +F +M N +L CS + G
Sbjct: 460 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 519
Query: 442 KQ-----VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
K+ VH F G + ++D+ + G +D+ + K MP + + + W ++
Sbjct: 520 KKLFEKMVHTF----GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
Query: 496 VGC 498
C
Sbjct: 576 AAC 578
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L C ++ GK +H I K + D L+ MYA +N A +LF E
Sbjct: 402 IVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAI 461
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++I W ++T + + A+ ++ M E V+PN + +L ACS +G + G+
Sbjct: 462 SRDICMWNAIITGFAMHGYGEEALDIFAEM-ERQGVKPNDITFIGLLHACSHAGLVTEGK 520
Query: 126 LIHERI 131
+ E++
Sbjct: 521 KLFEKM 526
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 207/735 (28%), Positives = 337/735 (45%), Gaps = 108/735 (14%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H II G S ++F L++ YA + LF + K+I W +++ ++ SN
Sbjct: 29 FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVLM 143
A Y M S+ PN F V+ C+ + G IH ++ L ++ +
Sbjct: 89 YQRAFDFYLQMRASSSL-PNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 147
Query: 144 NTLLDMYVKCGSLTRK--LFDQYS-----NWAASAYGNV--------------------- 175
++ + MY KCG + +F + + W A G V
Sbjct: 148 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 207
Query: 176 ALWNSMLSG------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
+ ++ SG GK +H +K GF +V ++++ MY +CG ++
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 267
Query: 224 FNFMPERDVVSWTGI------------------------------IVGC----------- 242
F + ++D++SWT I ++ C
Sbjct: 268 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 327
Query: 243 FECSCF--------------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
FE F T +AL+ MY L A K+F + + W+
Sbjct: 328 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED-------WS 380
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+MI GY Q E+ I+ L + G D + S + +C + N +H +
Sbjct: 381 TMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAIN--IGRSIHCYAI 438
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ + V ++L+D+Y + G+V + +FHR ++DV++W+ LI + G+ + A +
Sbjct: 439 KNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAII 498
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M+ N+ VL C+ LASL G+++H + + GFE T+LIDMY
Sbjct: 499 LFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYA 558
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCGE++ LF ERDV+ W +I G +G + A+ FQ M +S +KPN TFL
Sbjct: 559 KCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLS 618
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+LSAC H G V E +F M+ +YG+EP L+HY ++DLLG++G + AE L+ MP
Sbjct: 619 LLSACNHTGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPIT 677
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
PD T+W S+L AC+ HN ++ +A + + P++ Y++LS++Y+ LG WD + KVR
Sbjct: 678 PDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVR 737
Query: 649 KAGKKLG-EKKAGMS 662
KK G EK+AG S
Sbjct: 738 DMMKKRGVEKRAGWS 752
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 216/537 (40%), Gaps = 95/537 (17%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+ + I + C ++ +GK LH +K G + +LSMY+ S +A++ F
Sbjct: 209 NYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF 268
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ +K+++SWT+++ ++ + + L+ M + + P+ + S +L S +
Sbjct: 269 CKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM-QASEIIPDEIVISCMLMGFGNSDRI 327
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY----SNWAAS--AYG 173
G+ H RI ++ + N LL MY K G L K+F + +W+ Y
Sbjct: 328 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYS 387
Query: 174 NVAL-------------------WNSMLSG------------GKQVHAFCVKRGFEKEDV 202
N+ NS++S G+ +H + +K +
Sbjct: 388 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 447
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
SL+DMY K G + +F+ +RDV+SW + L+ Y +
Sbjct: 448 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISW---------------NTLISSYKQSGI 492
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
L EA LFD+ M+ V + T
Sbjct: 493 LAEAIILFDK-----------------MVKEKVYP--------------------NKVTC 515
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L AC +L + + ++H I +G+E + + + LID+YA+ G ++++ +LF+
Sbjct: 516 IIVLSACAHLASLDE--GEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNST 573
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++DV+ W+ +I HG A +F+ M SN N S+L C+ + G+
Sbjct: 574 EERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 633
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ K G E S+ID+ + G ++ AL MP D W ++ C
Sbjct: 634 HLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSAC 690
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG----------NVALWNSMISGYVLN 297
F +L+ N N + A KL Y+ A+ ++ LWNS+I + N
Sbjct: 27 FWFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSN 86
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDY 356
+ A + +S + +T + C L+ FN + +HGL G + +
Sbjct: 87 GDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNH--GMNIHGLTSKLGLFVGNS 144
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+GS+ I +Y++ G+V+SA +F + KDVV W+ LI+G ++ + +M
Sbjct: 145 AIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRI 204
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N I S + C L +L GK +H +K GF ++ ++++ MY +CG ++
Sbjct: 205 GGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEA 264
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
F + ++D++SWT II + G E + F EM S + P+EI
Sbjct: 265 YRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIV 313
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 291/536 (54%), Gaps = 35/536 (6%)
Query: 144 NTLLDMYVKCGS--LTRKLFDQYS-----NWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
N L+DMY KC + K+FD +W+A G+V N L G + + ++G
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL--NGDLKGSLSLFSEMGRQG 473
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ T ++ + ++ GL + F + +G FE ++LVDM
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFC----------LKIG-FEMMVEVGNSLVDM 522
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
YS C + EA K+F + + + WN+MI+G+V +A+ + + +
Sbjct: 523 YSKCGRINEAEKVFRRIVDRSLIS------WNAMIAGFVHAGYGSKALDTFGMMQEANIK 576
Query: 317 --IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD---YIVGSNLIDLYARLGN 371
D +T TS LKAC + + Q+HG +V SG+ I GS L+DLY + G
Sbjct: 577 ERPDEFTLTSLLKACSSTGMIYA--GKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGY 633
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA + F ++ +K +++WS LI+G + G A LF+ + N ++ F +SS++ V
Sbjct: 634 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 693
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ A LR+GKQ+ A VK E L S++DMYLKCG +D+ F M +DV+SW
Sbjct: 694 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 753
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I G G++G K+++ F EM++ ++P+E+ +L VLSAC H+G+++E +F+ +
Sbjct: 754 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 813
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+G++P +EHY C+VDLLG+AG +A+ LI MP KP+ IW ++L C H + +L
Sbjct: 814 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 873
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ + LL ++P+ YVM+SN+Y G W+ R+ G G +K+AGMSW+E+
Sbjct: 874 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 929
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 218/512 (42%), Gaps = 101/512 (19%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
++ T N L+ MY A+K+FD M +N+VSW+ +++ + N ++ L++ M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
G + PN F +S LKAC L L+ G IH + E + N+L+DMY KCG +
Sbjct: 471 RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 157 T------RKLFDQ--------YSNWAASAYGNVAL------------------------- 177
R++ D+ + + + YG+ AL
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 178 ---WNSMLSGGKQVHAFCVKRGFE-KEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDV 232
M+ GKQ+H F V+ GF T+T SL+D+Y+KCG + F+ + E+ +
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
+SW+ +I+G Y+ EA LF +
Sbjct: 650 ISWSSLILG---------------YAQEGEFVEAMGLFKR-------------------- 674
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
L E N + IDS+ +S + + +Q + + SG
Sbjct: 675 ---LQELNSQ--------------IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
E + ++++D+Y + G V A + F + KDV++W+ +I G KHGL + +F +
Sbjct: 718 ETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 775
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCG 471
M+ N + ++ +VL CS ++ G+++ + ++ G + ++D+ + G
Sbjct: 776 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 835
Query: 472 EIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ + L MP + +V W ++ C +G
Sbjct: 836 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
L+ I + LID+Y + A ++F +P+++VV+WS L+ G +G + LF +M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
N+F S+ LK C L +L +G Q+H FC+K GFE SL+DMY KCG I
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK--PNEITFLGVLS 531
++ +F+ + +R ++SW +I G G +A+ F M ++ +K P+E T +L
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 532 ACRHAGLV 539
AC G++
Sbjct: 590 ACSSTGMI 597
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 43/275 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG ++++G +H +K G + GN+L+ MY+ +N+A K+F + +++
Sbjct: 485 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 544
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIH 128
+SW M+ + + A+ + M E E P+ F +++LKACS +G + G+ IH
Sbjct: 545 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 604
Query: 129 ERITREKLEYDT--VLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA---------- 169
+ R + + +L+D+YVKCG L RK FDQ +W++
Sbjct: 605 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 664
Query: 170 ---------------SAYGNVALWN--------SMLSGGKQVHAFCVKRGFEKEDVTLTS 206
S + AL + ++L GKQ+ A VK E L S
Sbjct: 665 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 724
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
++DMYLKCG +D+ F M +DV+SWT +I G
Sbjct: 725 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 759
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 344/711 (48%), Gaps = 91/711 (12%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTG-NNLLSMYADFTSLNDAHKLFDE---MARKNIV 70
Q +++ Q K LH + I G + +T NL+ Y S+ +A L ++ + ++
Sbjct: 33 QCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVY 92
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
W ++ PN A+RL+ M + P+ + + V KAC + +LG IH
Sbjct: 93 WWNQLIRHALHFNSPNTALRLFRRM-KTLHWTPDHYTFPFVFKACGEISNFELGASIHGC 151
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS----------NWAASAYGN---- 174
+ R E + + N ++ MY KC ++ RK+FD+ N S Y +
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211
Query: 175 ---VALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLTS 206
V+L+ M G G+QVH FCV+ G ++ +
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+DMY KCG+++D +F M +DVV T +A+V YS +A
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVV---------------TWNAMVTGYSQNGRFEDA 316
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
LF + + +V W+S+ISGY EA+ + + + T S L
Sbjct: 317 LSLFGKMREEKIES--DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLL 374
Query: 327 KACIN---LLNFNSRFALQVHGLIVTSGYEL--DYIVGSNLIDLYARLGNVKSALELFHR 381
AC + LL+ V ++ + D V + LID+YA+ +++ A +F
Sbjct: 375 SACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDE 434
Query: 382 L-PK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLAS 437
+ PK +DVV W+ +I G +HG + A LF +M + + N F IS VL C+ LA+
Sbjct: 435 ICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAA 494
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTS--LIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L+ GKQ+HA+ ++R D+ + LIDMY K G++D +F M +R+ VSWT ++
Sbjct: 495 LKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLL 554
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G +GR+++A F EM + L + ITFL VL AC H+G+ ++G+
Sbjct: 555 TGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGV 601
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
+P +EHY CMVDLLG+AG +A +LI +MP +P +W ++L AC H+N +L A+
Sbjct: 602 DPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAK 661
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+LL ++ Y +LSN+YA W ++++ K+ G KK G SW++
Sbjct: 662 KLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVK 712
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 236/539 (43%), Gaps = 74/539 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ CG+ + + G S+H +I+ G ++F N ++SMY ++ A K+FDE+ + I
Sbjct: 133 FKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGI 192
Query: 70 ---VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
V+W ++V+ Y+ PN A+ L+ M + P+ +L C G GR
Sbjct: 193 CDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQ 252
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H R L D + N L+DMY KCG + K+F++ + +V WN+M++G
Sbjct: 253 VHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMR------FKDVVTWNAMVTG 306
Query: 185 GKQVHAF---------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERD 231
Q F + E + VT +S+I Y + G + + +F M +
Sbjct: 307 YSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPN 366
Query: 232 VVSWTGIIVGCF---------ECSCFT------------------LSALVDMYSNCNVLC 264
VV+ ++ C E C++ ++AL+DMY+ C L
Sbjct: 367 VVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLE 426
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTF 322
AR +FD+ +V W MI GY + A+ L S + CI + +T
Sbjct: 427 VARAMFDE----ICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 482
Query: 323 TSALKACINLLNFNSRFALQVHGLIV-TSGYELDYIVGSN-LIDLYARLGNVKSALELFH 380
+ L AC L +F Q+H ++ S + D + +N LID+Y++ G+V +A +F
Sbjct: 483 SCVLMACARLAAL--KFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFD 540
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ K++ V+W+ L+ G HG + A+ +F +M ++ VL CS
Sbjct: 541 SMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS-----HS 595
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G F V G E ++D+ + G + + + L MP E V W ++ C
Sbjct: 596 GMD---FGVDPGVEH----YACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSAC 647
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 53/284 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL-------SQDIFTGNNLLSMYADFTSLNDAH 58
++ L C ++ GK HC +K+ L + D+ N L+ MYA SL A
Sbjct: 370 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 429
Query: 59 KLFDEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKAC 115
+FDE+ K ++V+WT M+ Y + N A++L++ M + + + PN F S VL AC
Sbjct: 430 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMAC 489
Query: 116 SLSGDLDLGRLIHERITRE-KLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASA 171
+ L G+ IH + R +++ D + + N L+DMY K G + + +FD S
Sbjct: 490 ARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK----- 544
Query: 172 YGNVALWNSMLSG----GKQVHAFCVKRGFEKEDVTL----------------------- 204
N W S+L+G G+ AF V KE + L
Sbjct: 545 -RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDFGVDP 603
Query: 205 -----TSLIDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
++D+ + G + + + L N MP E V W ++ C
Sbjct: 604 GVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSAC 647
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 241/432 (55%), Gaps = 11/432 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I C+E + + L+ +Y+ C L +AR++ D+ NV W +MISGY
Sbjct: 36 MIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE------RNVVSWTAMISGYSQR 89
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
EA+ L + SG + +TF + L +C + F + Q+H L++ + +E
Sbjct: 90 GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGF--QLGRQIHSLVIKTSFESHIF 147
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS+L+D+YA+ G + A +F LP++DVV+ + +I G + GL+ A LFR +
Sbjct: 148 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 207
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N +SVL S LA+L G+QVH+ ++ + SLIDMY KCG +
Sbjct: 208 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 267
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHA 536
+F MPER V+SW ++VG ++G +EA+ F+ M ++++KP+ +TFL VLS C H
Sbjct: 268 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 327
Query: 537 GLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
G+ + IF M + G EP +EHY C+VDL G+AG ++A + I +MPF+P IW
Sbjct: 328 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 387
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KL 654
S+L AC H N + +A +LL E+ YV+LSN+YA+ G WD + VR+ K K
Sbjct: 388 SLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 447
Query: 655 GEKKAGMSWIEV 666
K+ G SWIE+
Sbjct: 448 VIKEPGRSWIEL 459
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 192/469 (40%), Gaps = 108/469 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +I++G+ +H +IK ++ L+ +Y L DA ++ DEM +N+
Sbjct: 17 LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNV 76
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++ Y+ + A+ L+ ML G+ PN F ++ VL +C+ S LGR IH
Sbjct: 77 VSWTAMISGYSQRGYASEALHLFVEMLMSGTA-PNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------------- 162
+ + E + ++LLDMY K G + R++FD
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 163 ------------QYSNWAASAYGNVALWN-SMLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
SN+ A AL + L G+QVH+ ++ V SLID
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + +F+ MPER V+SW ++VG YS + EA +L
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVG---------------YSKHGLGREAVEL 300
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F ++ E+N+ + DS TF + L C
Sbjct: 301 FK-----------------------LMKEENK-------------VKPDSVTFLAVLSGC 324
Query: 330 INLLNFNSRFALQVHGLIV-------TSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S ++ GL + G+E + ++DL+ R G V+ A E ++
Sbjct: 325 -------SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 377
Query: 383 PKKDVVA-WSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVL 429
P + A W L+ C H + + R ++ +++ ++I S L
Sbjct: 378 PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNL 426
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 16/297 (5%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ ++ + S L CI+ R +VH ++ + YE + + LI LY + +
Sbjct: 5 GLEVEFQGYDSVLTECISQTAI--REGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 62
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A + +P+++VV+W+ +I G ++ G S A LF +M+ S N+F ++VL C+
Sbjct: 63 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+ + G+Q+H+ +K FE +SL+DMY K G+I + +F +PERDVVS T
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II G Q G +EA+ F+ + + ++ N +T+ VL+A ++ + + +
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV---- 238
Query: 554 GLEPHLEHYYC----MVDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASMLKACETH 604
L L Y ++D+ + G + ++ M P++T+ W +ML H
Sbjct: 239 -LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSM---PERTVISWNAMLVGYSKH 291
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ G+ +H +++ L + N+L+ MY+ SL + ++FD M + ++SW M+
Sbjct: 227 ALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLV 286
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK-- 135
Y+ + A+ L+ M E V+P+ + AVL CS G D G I + +K
Sbjct: 287 GYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDG 346
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLSGGKQVHA---- 190
E + ++D++ + G + F + + +A A+W S+L G +VH
Sbjct: 347 FEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA----AIWGSLL-GACRVHQNVHI 401
Query: 191 --FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
F +R E E + + ++Y G DD + M E+ V+ G
Sbjct: 402 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPG 453
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 330/661 (49%), Gaps = 120/661 (18%)
Query: 111 VLKACSLSGDLDLGRLIHERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-- 165
+L + + +GDL LGR +H R+ R E L+ D V+ N+LL MY KCG++ R++FDQ
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 166 ----NWAASA---YGNVALWNSM--------------------------------LSGGK 186
+W A A N A S+ L+GG
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGG- 164
Query: 187 QVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV----- 240
V F +K GF DV++ +LIDM+ + G++ +F+ + ER V WT +I
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 241 GC---------------FECSCFTLSA--------------------------------- 252
GC FE +++S+
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 253 --LVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE-QNEEAITL 306
LVDMY+ + + ARK+F NV W ++ISGYV + Q + L
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRH------NVMSWTALISGYVQSGVQENNVMAL 338
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ + + + T+++ LKAC NL + +S Q+H ++ + +VG+ L+ +Y
Sbjct: 339 FREMLNESIRPNHITYSNLLKACANLSDQDS--GRQIHAHVLKTSIAHVNVVGNALVSMY 396
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A G ++ A + F +L + ++++ S + + S + + V+ F +
Sbjct: 397 AESGCMEEARKAFDQLYETNILSMSPDVETERNNASCS------SKIEGMDDGVSTFTFA 450
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
S+L + + L +G+++HA +K GF + SL+ MY +CG ++D F M +
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH 510
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+V+SWT II G ++G AK+A++ F +MI + +KPN++T++ VLSAC H GLV+E F
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
SM+ ++GL P +EHY C+VDLL ++G ++A Q I EMP K D +W ++L AC T+ N
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGN 630
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
T++ I A ++ P DP+ YV+LSN+YA G+WD ++++R + K K+ G+SW++
Sbjct: 631 TEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMD 690
Query: 666 V 666
V
Sbjct: 691 V 691
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 183/447 (40%), Gaps = 103/447 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFT---SLNDAHKLFDEMARKNI 69
C + S++ G+ LH ++ GL D L+ MYA S+ A K+F M R N+
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315
Query: 70 VSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SWT +++ Y S + N + L+ ML S+ PN YS +LKAC+ D D GR IH
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNE-SIRPNHITYSNLLKACANLSDQDSGRQIH 374
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ----------------------- 163
+ + + + V+ N L+ MY + G + RK FDQ
Sbjct: 375 AHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCS 434
Query: 164 ---------YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
S + ++ + A +L+ G+++HA +K GF + SL+ MY +C
Sbjct: 435 SKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARC 494
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G ++D F+ M + +V+SWT II G
Sbjct: 495 GYLEDACRAFDEMKDHNVISWTSIISG--------------------------------- 521
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INL 332
A Y AL SM +L +G+ + T+ + L AC + L
Sbjct: 522 -LAKHGYAKQAL--SMFHDMIL----------------AGVKPNDVTYIAVLSACSHVGL 562
Query: 333 LNFNS---RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVV 388
+ R + HGL+ + + ++DL AR G V+ A + + +P K D +
Sbjct: 563 VKEGKEHFRSMQKDHGLLPRMEHY------ACIVDLLARSGLVEEARQFINEMPCKADAL 616
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMIN 415
W L+ C +G + + +IN
Sbjct: 617 VWKTLLSACRTYGNTEIGEIAANHVIN 643
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G+ +H ++K ++ GN L+SMYA+ + +A K FD++ NI
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNI 417
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+S + V +N + I + + + F ++++L A + G L G+ +H
Sbjct: 418 LSMSPDVETERNNASCSSKIEGMDDGV-------STFTFASLLSAAASVGLLTKGQKLHA 470
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ D + N+L+ MY +CG L + FD+ + NV W S++SG
Sbjct: 471 LSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH------NVISWTSIISGLAK 524
Query: 185 ---GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
KQ + + G + DVT +++ G + +G F M ++D G+
Sbjct: 525 HGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSM-QKD----HGL 579
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ +C +VD+ + ++ EAR+ ++ A + +W +++S
Sbjct: 580 LPRMEHYAC-----IVDLLARSGLVEEARQFINEMPCKA-----DALVWKTLLSA 624
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 231/401 (57%), Gaps = 9/401 (2%)
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
RK+FD+ +V WN+++ G ++ EA+ L+ + G DS+T +S L
Sbjct: 125 RKVFDEMIE------RDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVL 178
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+ + +VHG V +G++ D VGS+LID+YA ++++F LP +D
Sbjct: 179 PIFAECADV--KRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 236
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+ W+ ++ GC ++G A +FR M+ + SS++ VC LASLR GKQ+HA
Sbjct: 237 PILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHA 296
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ ++ GFE +SLIDMY KCGEI +F M DVVSWT +I+G +G A+E
Sbjct: 297 YVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPARE 356
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F+ M KPN ITFL VL+AC HAGLV++ W F SM YG+ P LEH +
Sbjct: 357 ALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALA 416
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG D+A I++M KP ++W+++L+AC H NT L +A++++ P
Sbjct: 417 DILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIG 476
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+V+LSN+Y+ G W+ + +RK+ +K G KK SWIEV
Sbjct: 477 SHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEV 517
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 182/421 (43%), Gaps = 57/421 (13%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK----------------C 153
A LK+C+ G LG +H R D N LL++Y K
Sbjct: 56 AALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGT 115
Query: 154 GSLT-----RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKR-----GFEK 199
GS T RK+FD+ +V WN+++ G G+ A + R GF
Sbjct: 116 GSSTALESVRKVFDEMIE------RDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRP 169
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ TL+S++ ++ +C ++ G + F + F+ F S+L+DMY+N
Sbjct: 170 DSFTLSSVLPIFAECADVKRGSEVHGFA-----------VRNGFDNDVFVGSSLIDMYAN 218
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
C + K+FD + LWNS+++G N EEA+ + + +G+
Sbjct: 219 CTRTDYSVKVFDNLP------VRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVP 272
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
TF+S + C NL + RF Q+H ++ G+E + + S+LID+Y + G + A +F
Sbjct: 273 VTFSSLIPVCGNLASL--RFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIF 330
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
R+ DVV+W+ +IMG HG A +LF M N N +VL CS +
Sbjct: 331 DRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD 390
Query: 440 RG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVG 497
+G K + G +L D+ + GE+D+ M + S W+ ++
Sbjct: 391 KGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRA 450
Query: 498 C 498
C
Sbjct: 451 C 451
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 179/433 (41%), Gaps = 64/433 (14%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF----------------- 51
AL+ C G SLH I+ G D FT N LL++Y
Sbjct: 57 ALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTG 116
Query: 52 --TSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
T+L K+FDEM +++VSW T+V R + A+ L M G P+ F S
Sbjct: 117 SSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREG-FRPDSFTLS 175
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNW 167
+VL + D+ G +H R + D + ++L+DMY C + K+FD
Sbjct: 176 SVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLP-- 233
Query: 168 AASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
+ LWNS+L+G Q + ++ G VT +SLI + CG
Sbjct: 234 ----VRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPV---CGN-- 284
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
LA F + +I G FE + F S+L+DMY C + A +FD+ S
Sbjct: 285 --LASLRFGKQLHAY----VIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCS--- 335
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFN 336
+V W +MI GY L+ EA+ L + + TF + L AC L++
Sbjct: 336 ---PDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKG 392
Query: 337 SRF--ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGL 393
++ ++ H IV + L++ L D+ R G + A ++ K + WS L
Sbjct: 393 WKYFKSMSDHYGIVPT---LEHCAA--LADILGRAGELDEAYNFISKMQIKPTASVWSTL 447
Query: 394 IMGCTKHGLNSLA 406
+ C H LA
Sbjct: 448 LRACRVHKNTMLA 460
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK-------------CG 471
+ + LK C+ L G +HA ++ G + T +L+++Y K G
Sbjct: 54 LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVG 113
Query: 472 EIDDGLAL------FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
AL F M ERDVVSW +++GC + GR EA+ ++M + +P+ T
Sbjct: 114 GTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFT 173
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
VL V+ + G + + ++D+ D + ++ +
Sbjct: 174 LSSVLPIFAECADVKRGSEVH-GFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNL 232
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
P + D +W S+L C + + + I ++L T
Sbjct: 233 PVR-DPILWNSVLAGCAQNGSVEEALGIFRRMLQT 266
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 310/679 (45%), Gaps = 137/679 (20%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
+ +A +F+ M KN VSWT ++TAY N N A ++N + +PN Y+A++
Sbjct: 63 IKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKI-----PDPNVASYNAMIT 117
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
A H R ++ + F+ +S+
Sbjct: 118 A------------YHRR------------------------NMVDEAFELFSSMPQR--- 138
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPER 230
N + +M++G F + +E + S LI+ Y K G ++D + +F+ M E+
Sbjct: 139 NSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEK 198
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNV--LCEARKLFDQYSSWAASAYGNVALWN 288
DVVSW+ +I G C V + EARKLFD+ NV W
Sbjct: 199 DVVSWSSMISGL-----------------CRVGKIVEARKLFDKMPD------RNVVTWT 235
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI GY+ ++ L ++ G+ +++ T T L+AC + + +Q+HGL++
Sbjct: 236 LMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGE--GIQIHGLVL 293
Query: 349 TSGYELDYIVGSNLIDLYARL-------------------------------GNVKSALE 377
+ G+++D + +++I +Y+R GN++ A+
Sbjct: 294 SLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVF 353
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGL-------------------------------NSLA 406
LF +P+KDVV+W+ LI G G +A
Sbjct: 354 LFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIA 413
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+ F M+ S N F +S VL + +A L +G Q+HA K E + SL+ M
Sbjct: 414 FHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSM 473
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG +DD L +F ++ +VV++ II G QNG KEA+ F +M L PN ITF
Sbjct: 474 YSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITF 533
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
LGVLSAC H GLVEE F M+ Y ++P +HY CMVDLL +AG FD+A L++ MP
Sbjct: 534 LGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMP 593
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F P + +W ++L A TH + + A+ L P + YV+LSN+++ G
Sbjct: 594 FDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHEL 653
Query: 647 VRKAGKKLGEKKA-GMSWI 664
+R K G KK+ G SWI
Sbjct: 654 IRLMKKSRGLKKSPGCSWI 672
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 175/435 (40%), Gaps = 78/435 (17%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
RI +D+ + ++++S + +A KLFD+M +N+V+WT M+ Y
Sbjct: 189 VRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLK 248
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
L+ +M G VE N + +L+AC G IH + + D L N++
Sbjct: 249 DGFILFLNMRREG-VEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSI 307
Query: 147 LDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML-----SGGKQVHAFCVKRGFEK 199
+ MY +C S+ K FD ++ WNS++ SG + F + +K
Sbjct: 308 ITMYSRCYSIDAAAKQFD------LMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK 361
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------ 241
+ V+ T+LI + G ID+ + LF MPE+D ++WT +I G
Sbjct: 362 DVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKML 421
Query: 242 --CFECSCFTLS-----------------------------------ALVDMYSNCNVLC 264
+ + FTLS +LV MYS C +
Sbjct: 422 QSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVD 481
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+A K+F NV +N++I+G N +EA+ + + + + + TF
Sbjct: 482 DALKMFYYIK------VPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLG 535
Query: 325 ALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
L AC+++ L R + + E D+ + ++DL R G A+ L +P
Sbjct: 536 VLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHY--ACMVDLLCRAGMFDEAVSLVSSMP 593
Query: 384 KKDVVAWSGLIMGCT 398
G ++G +
Sbjct: 594 FDPHQGVWGAVLGAS 608
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG +G +H ++ G D + N++++MY+ S++ A K FD M +K+I
Sbjct: 273 LEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDI 332
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD----LGR 125
V+W +++T Y + A+ L+ +M + V ++ ++ + G +D L +
Sbjct: 333 VTWNSLITGYVQSGNLEKAVFLFENMPQKDVVS-----WTTLICGFASEGRIDEFIGLFQ 387
Query: 126 LIHER------------ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
++ E+ ++ E+ E +L +K + T SA
Sbjct: 388 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSC-------VLSAGA 440
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
++A+ N G Q+HA K E + SL+ MY KCG +DD L +F ++ +VV
Sbjct: 441 SMAILNQ----GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVV 496
Query: 234 SWTGIIVG 241
++ II G
Sbjct: 497 AYNTIITG 504
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ QG +H + K + D+ N+L+SMY+ +++DA K+F + N+V++ T++T
Sbjct: 445 LNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITG 504
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N A+ ++ M + + PN + VL AC G ++ GR
Sbjct: 505 LAQNGLGKEALEIFTKMQD-DYLVPNHITFLGVLSACVHVGLVEEGR 550
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 241/432 (55%), Gaps = 11/432 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I C+E + + L+ +Y+ C L +AR++ D+ NV W +MISGY
Sbjct: 503 MIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER------NVVSWTAMISGYSQR 556
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
EA+ L + SG + +TF + L +C + F + Q+H L++ + +E
Sbjct: 557 GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGF--QLGRQIHSLVIKTSFESHIF 614
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS+L+D+YA+ G + A +F LP++DVV+ + +I G + GL+ A LFR +
Sbjct: 615 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 674
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N +SVL S LA+L G+QVH+ ++ + SLIDMY KCG +
Sbjct: 675 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 734
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHA 536
+F MPER V+SW ++VG ++G +EA+ F+ M ++++KP+ +TFL VLS C H
Sbjct: 735 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 794
Query: 537 GLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
G+ + IF M + G EP +EHY C+VDL G+AG ++A + I +MPF+P IW
Sbjct: 795 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 854
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KL 654
S+L AC H N + +A +LL E+ YV+LSN+YA+ G WD + VR+ K K
Sbjct: 855 SLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 914
Query: 655 GEKKAGMSWIEV 666
K+ G SWIE+
Sbjct: 915 VIKEPGRSWIEL 926
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 192/469 (40%), Gaps = 108/469 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +I++G+ +H +IK ++ L+ +Y L DA ++ DEM +N+
Sbjct: 484 LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNV 543
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++ Y+ + A+ L+ ML G+ PN F ++ VL +C+ S LGR IH
Sbjct: 544 VSWTAMISGYSQRGYASEALHLFVEMLMSGTA-PNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------------- 162
+ + E + ++LLDMY K G + R++FD
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 163 ------------QYSNWAASAYGNVALWN-SMLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
SN+ A AL + L G+QVH+ ++ V SLID
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + +F+ MPER V+SW ++VG YS + EA +L
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVG---------------YSKHGLGREAVEL 767
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F ++ E+N+ + DS TF + L C
Sbjct: 768 FK-----------------------LMKEENK-------------VKPDSVTFLAVLSGC 791
Query: 330 INLLNFNSRFALQVHGLIV-------TSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S ++ GL + G+E + ++DL+ R G V+ A E ++
Sbjct: 792 -------SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844
Query: 383 PKKDVVA-WSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVL 429
P + A W L+ C H + + R ++ +++ ++I S L
Sbjct: 845 PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNL 893
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 155/314 (49%), Gaps = 19/314 (6%)
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
N Q +EA L + G+ ++ + S L CI+ R +VH ++ + YE
Sbjct: 458 NRQLKEA---LLEMGIQGLEVEFQGYDSVLTECISQTAI--REGQRVHAHMIKTCYEPPV 512
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ + LI LY + + A + +P+++VV+W+ +I G ++ G S A LF +M+ S
Sbjct: 513 YLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS 572
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N+F ++VL C+ + + G+Q+H+ +K FE +SL+DMY K G+I +
Sbjct: 573 GTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEA 632
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+F +PERDVVS T II G Q G +EA+ F+ + + ++ N +T+ VL+A
Sbjct: 633 RRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGL 692
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYC----MVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
++ + + + L L Y ++D+ + G + ++ M P++T
Sbjct: 693 AALDHGRQVHSHV-----LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSM---PERT 744
Query: 593 I--WASMLKACETH 604
+ W +ML H
Sbjct: 745 VISWNAMLVGYSKH 758
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
++ G+ +H +++ L + N+L+ MY+ SL + ++FD M + ++SW M+
Sbjct: 694 ALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLV 753
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK-- 135
Y+ + A+ L+ M E V+P+ + AVL CS G D G I + +K
Sbjct: 754 GYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDG 813
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWNSMLSGGKQVHA---- 190
E + ++D++ + G + F + + +A A+W S+L G +VH
Sbjct: 814 FEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA----AIWGSLL-GACRVHQNVHI 868
Query: 191 --FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
F +R E E + + ++Y G DD + M E+ V+ G
Sbjct: 869 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPG 920
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 338/682 (49%), Gaps = 54/682 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + AL+ C R +K+G +H G + + N ++ MY ++A +
Sbjct: 1 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 58
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRP-NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F+ + ++VSW T+++ + N+ N+ +R+ + V + F YS L C S
Sbjct: 59 FENLVDPDVVSWNTILSGFDDNQIALNFVVRM-----KSAGVVFDAFTYSTALSFCVGSE 113
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
LG + + + LE D V+ N+ + MY + GS R++FD+ S + ++
Sbjct: 114 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS------FKDMIS 167
Query: 178 WNSMLSGGKQVHAF----------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WNS+LSG Q F ++ G E + V+ TS+I C E D LA
Sbjct: 168 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC--CHETDLKLA----- 220
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
R + I +E + L+ YS C VL + +F Q S NV W
Sbjct: 221 --RQIHGLC--IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER------NVVSW 270
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MIS ++A+++ ++ G+ + TF + A N + L++HGL
Sbjct: 271 TTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV--KCNEQIKEGLKIHGLC 323
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G+ + VG++ I LYA+ ++ A + F + +++++W+ +I G ++G + A
Sbjct: 324 IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 383
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLA--SLRRGKQVHAFCVKRGFEKEDITLTSLID 465
+F N++ SVL + S+++G++ HA +K G + ++L+D
Sbjct: 384 KMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 442
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G ID+ +F M +++ WT II +G + + F +MI+ + P+ +T
Sbjct: 443 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 502
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL+AC G+V++ + IF M Y LEP EHY CMVD+LG+AG +AE+L++E+
Sbjct: 503 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P P +++ SML +C H N K+ + +AE + PE YV + N+YA WD +
Sbjct: 563 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 622
Query: 646 KVRKAGKKLG-EKKAGMSWIEV 666
++RKA +K K+AG SWI+V
Sbjct: 623 EIRKAMRKKNVSKEAGFSWIDV 644
>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
Length = 763
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 207/735 (28%), Positives = 341/735 (46%), Gaps = 116/735 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLS--QDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+++ CG S+ +++ R+++ + D + N+L++MYA SL +A F++
Sbjct: 36 VIDVFSRCG---SLVNARNVFDRMVRRDVVSWNDSYALNSLVNMYAKCGSLVEARAEFEK 92
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLD 122
+ R++ VSWTT++ AYT N R A+ L++ M + G + P+G Y A L AC SL L+
Sbjct: 93 LQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCL-PDGRTYLAALVACASLLRCLE 151
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYG-- 173
G +H + + + NTL+DMY KCGSL +K+FD W A G
Sbjct: 152 RGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYA 211
Query: 174 ----------------------NVALWNSML----SG-----GKQVHAFCVKRGFEKEDV 202
N + S+L SG G ++HA + +K+
Sbjct: 212 ENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTA 271
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--------------------- 241
L+ MY KCG++ F + R+ VSWT ++
Sbjct: 272 IGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEG 331
Query: 242 -----------CFECSCFTL-------------------------SALVDMYSNCNVLCE 265
C +C +L +ALV MY+ C+ L E
Sbjct: 332 AQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEE 391
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
AR++FD + + W S+IS YV +E+ +E++ + ++ GM D T ++
Sbjct: 392 ARRVFDNIQDKSRVS------WTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSAL 445
Query: 326 LKACINLLNFNSRFALQ--VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
AC L + A+ VH I +G++ + +VG+ L+ +YAR G + A +F++L
Sbjct: 446 CAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLT 505
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KDVV+W+ ++ + G A L + M + + V+ CS L +
Sbjct: 506 PKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRA 565
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS---WTGIIVGCGQ 500
VH RG + ++ T+L+ MY KCG +DD +F+ M V++ W I+ +
Sbjct: 566 VHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAK 625
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G A+ +F+ M + ++P+ IT +L AC H+GL+ F SM ++GL P E
Sbjct: 626 HGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAE 685
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY C++DLLG+AG +AE++I MPF PD W ++L +C+T + S A QL+
Sbjct: 686 HYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGRGSRAAMQLIRM 745
Query: 621 SP-EDPSKYVMLSNV 634
P S YV+LSN+
Sbjct: 746 DPLLHDSSYVLLSNI 760
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 201/457 (43%), Gaps = 94/457 (20%)
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
E DT + NT++D++ +CGSL R +FD+ +V WN
Sbjct: 27 ESDTFVANTVIDVFSRCGSLVNARNVFDRMVRR------DVVSWN--------------- 65
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-------------- 240
+ L SL++MY KCG + + A F + RD VSWT +I+
Sbjct: 66 -----DSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALEL 120
Query: 241 -------GCFE---------CSCFTL--------------------------SALVDMYS 258
GC +C +L + L+DMYS
Sbjct: 121 FSRMADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYS 180
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
C L +A+K+FD + A A W +M+ GY N + E A+ L + + G +
Sbjct: 181 KCGSLLDAKKVFDSTQARDAVA------WTAMMLGYAENGEAERALHLFACMEQQGCMYN 234
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+TS L+ CI+ ++H ++ + D +G+ L+ +YA+ G++ A +
Sbjct: 235 REAYTSLLRECISGRALER--GARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKA 292
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR--DMINSNQDVNQFIISSVLKVCSCLA 436
F+ + +++ V+W+ ++ HG LF D+ + D++ F +S VL CS L
Sbjct: 293 FYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLG 352
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ G+ +HA V G+E + +L+ MY KC +++ +F + ++ VSWT II
Sbjct: 353 AGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIIS 412
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
Q+ R E++ F M ++P+E+T + +AC
Sbjct: 413 AYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAAC 449
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 186/499 (37%), Gaps = 139/499 (27%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + L C + +G+++H R++ G DI N L++MYA L +A ++
Sbjct: 336 MDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRV 395
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + K+ VSWT++++AY ++R + +++++ M ++P+ SA+ AC D
Sbjct: 396 FDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAM-NLDGMQPDEMTLSALCAACCQLED 454
Query: 121 ----LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN 174
L +GR +H RI + + V+ L+ MY +CG L +F++ + +
Sbjct: 455 RGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTP------KD 508
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
V WN+ML+ + VH
Sbjct: 509 VVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHT 568
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
RG + V+ T+L+ MY KCG +DD +F M V++
Sbjct: 569 EVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLA---------------- 612
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
VA WNS+++ + A+ +
Sbjct: 613 ---------------------------------VAAWNSILAALAKHGHGATAVEFFRVM 639
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG----------- 359
+ + D T T L AC + GL+ T LDY +
Sbjct: 640 TMAYVQPDGITITVMLHACSH------------SGLLATG---LDYFLSMLHDFGLAPAA 684
Query: 360 ---SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH---GLNSLAYLLFRD 412
+ LIDL R G A E+ +P D VAW L+ C G S A +
Sbjct: 685 EHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGRGSRAAMQLIR 744
Query: 413 MINSNQDVNQFIISSVLKV 431
M D + ++S++L V
Sbjct: 745 MDPLLHDSSYVLLSNILPV 763
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK--EDITLTSLIDMYLKCGEIDDGLA 478
+ F+ ++V+ V S SL + V V+R + L SL++MY KCG + + A
Sbjct: 29 DTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNMYAKCGSLVEARA 88
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F+ + RD VSWT +I+ +NGR EA+ F M P+ T+L L AC
Sbjct: 89 EFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALVACASLLR 148
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E S G + ++D+ + G DA+++ + D W +M+
Sbjct: 149 CLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQAR-DAVAWTAMM 207
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 205/700 (29%), Positives = 319/700 (45%), Gaps = 126/700 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I AL G RS+ G LH ++K GL N+LLS Y+ + A +FDE+
Sbjct: 7 IGSALARFGASRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIP 64
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW+++VTAY++N P A+ + M G V N + VLK D+ G
Sbjct: 65 DPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRG-VPCNEYALPIVLKCAP---DVRFGA 120
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H +L D + N L+ MY G + +++FD+ N WN M+S
Sbjct: 121 QVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDE-----PGGERNAVSWNGMIS 175
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G+QVH V+ G++K
Sbjct: 176 AYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDK 235
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------- 244
+ T +L+DMY K G+I+ +F +P DVVSW +I GC
Sbjct: 236 DVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMK 295
Query: 245 -----CSCFTLSA-----------------------------------LVDMYSNCNVLC 264
+ FTLS+ LVDMY+ L
Sbjct: 296 PLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLD 355
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID--SYTF 322
+ARK+FD ++ LWN++ISG + ++ E ++L + G+ +D T
Sbjct: 356 DARKVFDFMPRR------DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 409
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ LK+ +L QVH L G D V + LID Y + G + A+++F
Sbjct: 410 AAVLKSTASLEAIC--HTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEES 467
Query: 383 PKKDVVAWSGLIMGCTK--HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
D+++ + ++ ++ HG +++ LF M+ + + F++SS+L C+ L++ +
Sbjct: 468 CSDDIISSTSMMTALSQCDHGEDAIK--LFVQMLRKGLEPDSFVLSSLLNACASLSAYEQ 525
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GKQVHA +KR F + +L+ Y KCG I+D F +PE+ VVSW+ +I G Q
Sbjct: 526 GKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQ 585
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G K A+ F M+ + PN IT VLSAC HAGLV++A F SMK +G++ E
Sbjct: 586 HGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEE 645
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
HY CM+D+LG+AG DA +L+ MPF+ + +W ++L A
Sbjct: 646 HYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGA 685
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 219/537 (40%), Gaps = 110/537 (20%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R + G+ +H +++ G +D+FT N L+ MY+ + A +F+++ ++VSW
Sbjct: 212 CTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSW 271
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ ++ + A+ L M G V PN F S+VLKAC+ +G +LGR IH +
Sbjct: 272 NALIAGCVTHGHDHRALELLLQMKPLGVV-PNVFTLSSVLKACAGAGAFNLGRQIHGFMI 330
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ + D + L+DMY K G L RK+FD ++ LWN+++SG
Sbjct: 331 KADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRR------DLILWNALISGCSHDGR 384
Query: 185 ----------------------------------------GKQVHAFCVKRGFEKEDVTL 204
KQVHA K G + +
Sbjct: 385 HGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVV 444
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
LID Y KCG +D + +F D++S T ++ +C
Sbjct: 445 NGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQC------------------- 485
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ E+AI L + G+ DS+ +S
Sbjct: 486 ---------------------------------DHGEDAIKLFVQMLRKGLEPDSFVLSS 512
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L AC +L + QVH ++ + D G+ L+ YA+ G+++ A F LP+
Sbjct: 513 LLNACASLSAYEQ--GKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPE 570
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ- 443
K VV+WS +I G +HG A LF M++ N ++SVL C+ + K+
Sbjct: 571 KGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKY 630
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
+ G ++ + +ID+ + G++ D + L MP + + G ++G +
Sbjct: 631 FESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGASR 687
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 16/351 (4%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ YS C + AR +FD+ + W+S+++ Y N +A+ +
Sbjct: 43 LLSFYSRCRLPSAARAVFDEIPDPCHVS------WSSLVTAYSNNGMPRDALWAFRSMRG 96
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ + Y LK ++ RF QVH L V + D V + L+ +Y G V
Sbjct: 97 RGVPCNEYALPIVLKCAPDV-----RFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMV 151
Query: 373 KSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
A +F +++ V+W+G+I K+ A +FR+M+ S + N+F S V+
Sbjct: 152 DEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNA 211
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ G+QVH V+ G++K+ T +L+DMY K G+I+ +F+ +P DVVSW
Sbjct: 212 CTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSW 271
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-K 550
+I GC +G A+ +M + PN T VL AC AG I M K
Sbjct: 272 NALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIK 331
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ + + +VD+ + G DDA ++ MP + D +W +++ C
Sbjct: 332 ADADSDEFVA--VGLVDMYAKDGFLDDARKVFDFMP-RRDLILWNALISGC 379
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 8/266 (3%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
+H ++ SG Y ++L+ Y+R +A +F +P V+WS L+ + +G
Sbjct: 25 HLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNG 82
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
+ A FR M N++ + VLK C +R G QVHA V ++
Sbjct: 83 MPRDALWAFRSMRGRGVPCNEYALPIVLK---CAPDVRFGAQVHALAVATRLIQDVFVTN 139
Query: 462 SLIDMYLKCGEIDDGLALF-KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+L+ MY G +D+ +F + ER+ VSW G+I +N R ++A+ F+EM+ S +
Sbjct: 140 ALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGER 199
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PNE F V++AC + E + M G + + +VD+ + G + A
Sbjct: 200 PNEFGFSCVVNACTGSRDWETGRQVH-GMVVRTGYDKDVFTANALVDMYSKLGDIEMAAV 258
Query: 581 LIAEMPFKPDKTIWASMLKACETHNN 606
+ ++P D W +++ C TH +
Sbjct: 259 VFEKIP-AADVVSWNALIAGCVTHGH 283
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 171/433 (39%), Gaps = 98/433 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+ +H +IK D F L+ MYA L+DA K+FD M R+++
Sbjct: 310 LKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDL 369
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +++ + + R + L++ M + G ++ N +AVLK+ + + + +H
Sbjct: 370 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVH 429
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR------------------------------ 158
+ L D+ ++N L+D Y KCG L
Sbjct: 430 ALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGE 489
Query: 159 ---KLFDQY-------SNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
KLF Q ++ S+ N S GKQVHA +KR F + +L+
Sbjct: 490 DAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALV 549
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
Y KCG I+D F+ +PE+ VVSW+ +I G
Sbjct: 550 YTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGL-------------------------- 583
Query: 269 LFDQYSSWAASAYGNVA--LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
A +G A L++ M+ V N ++LS + +G+ D+ + ++
Sbjct: 584 --------AQHGHGKRALELFHRMLDEGVA-PNNITLTSVLSACNHAGLVDDAKKYFESM 634
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
K + +A +ID+ R G +K A+EL + +P +
Sbjct: 635 KEAFGIDRTEEHYAC--------------------MIDILGRAGKLKDAMELVNNMPFQA 674
Query: 387 VVAWSGLIMGCTK 399
A G ++G ++
Sbjct: 675 NAAVWGALLGASR 687
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 31/310 (10%)
Query: 1 MDLRR--IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH 58
+D+ R + L+ +I K +H K GL D N L+ Y L+ A
Sbjct: 402 LDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAI 461
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
K+F+E +I+S T+M+TA + AI+L+ ML G +EP+ F+ S++L AC+
Sbjct: 462 KVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKG-LEPDSFVLSSLLNACASL 520
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALW 178
+ G+ +H + + + D N L+ Y KCGS+ D ++ V W
Sbjct: 521 SAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIE----DADMAFSGLPEKGVVSW 576
Query: 179 NSMLSG------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
++M+ G GK+ + G ++TLTS++ G +DD F M E
Sbjct: 577 SAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKE 636
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ T C ++D+ L +A +L + A N A+W +
Sbjct: 637 AFGIDRTEEHYAC----------MIDILGRAGKLKDAMELVNNMPFQA-----NAAVWGA 681
Query: 290 MISGYVLNEQ 299
++ LN Q
Sbjct: 682 LLGASRLNLQ 691
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 207/727 (28%), Positives = 343/727 (47%), Gaps = 165/727 (22%)
Query: 72 WTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
W + + + T S+ + AI Y +M+ G V P+ F + AVLKA + DL+LG+ +H
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAG-VPPDNFAFPAVLKATAGIQDLNLGKQLHAH 110
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + T + N+L++MY KCG + R++FD+ +N + WNSM++
Sbjct: 111 VFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVS------WNSMINAACRF 164
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQVHAF ++ G + T
Sbjct: 165 EEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFT 223
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI------------------------- 238
+L+ MY K G + + LF+ ++D+VSW I
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGV 283
Query: 239 ------------------IVGCF-ECSCFTL------------SALVDMYSNCNVLCEAR 267
++GC E F L ALVDMY NC + R
Sbjct: 284 RPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGR 343
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSAL 326
+FD +A+WN+MI+GYV NE + EAI L + + G+ +S T +S L
Sbjct: 344 LVFD------GMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVL 397
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC+ +F + +H +V G+E D V + L+D+Y+R+G ++ A +F + +KD
Sbjct: 398 PACVRCESFLDKEG--IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKD 455
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDM--------INSNQD----------VNQFIISSV 428
+V+W+ +I G G + A L DM IN+ D N + +V
Sbjct: 456 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTV 515
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L C+ LA+L +GK++HA+ VK+ K+ ++L+DMY KCG ++ +F+ M R+V
Sbjct: 516 LPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNV 575
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQS-----RLKPNEITFLGVLSACRHAGLVEEAW 543
++W +I+ G +G+ +EA+ F+ M++ ++PNE+T++ + ++ H+G+V+E
Sbjct: 576 ITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGL 635
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKACE 602
+F +MK ++G+EP +HY C+VDLLG++G ++A LI MP K W+S+L AC+
Sbjct: 636 NLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACK 695
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE----KK 658
H N ++ I A+ L P + D +K G+K+ E K+
Sbjct: 696 IHQNLEIGEIAAKNLFVLDP----------------NVLDYGTKQSMLGRKMKEKGVRKE 739
Query: 659 AGMSWIE 665
G SWIE
Sbjct: 740 PGCSWIE 746
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 132/326 (40%), Gaps = 55/326 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S + +H ++K+G +D + N L+ MY+ + A +F M RK+I
Sbjct: 397 LPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDI 456
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE------------------PNGFMYSAV 111
VSW TM+T Y R + A+ L H ++ G E PN V
Sbjct: 457 VSWNTMITGYVVCGRHDDALNLL-HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTV 515
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAA 169
L C+ L G+ IH ++ L D + + L+DMY KCG +L+R +F+Q S
Sbjct: 516 LPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS---- 571
Query: 170 SAYGNVALWNSMLSG----GKQVHAFCVKRGFEKE----------DVTLTSLIDMYLKCG 215
NV WN ++ GK A + R +E +VT ++ G
Sbjct: 572 --VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSG 629
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+D+GL LF M + + T C LVD+ + EA L
Sbjct: 630 MVDEGLNLFYTMKAKHGIEPTSDHYAC----------LVDLLGRSGQIEEAYNLIKTM-- 677
Query: 276 WAASAYGNVALWNSMISGYVLNEQNE 301
S V W+S++ +++ E
Sbjct: 678 --PSNMKKVDAWSSLLGACKIHQNLE 701
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C ++ +GK +H +K LS+D+ G+ L+ MYA LN + +F++M+
Sbjct: 512 LMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS 571
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG----SVEPNGFMYSAVLKACSLSGDL 121
+N+++W ++ AY + + A++L+ M+E G + PN Y A+ + S SG +
Sbjct: 572 VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMV 631
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
D G L + + +E + L+D+ + G + S V W+S
Sbjct: 632 DEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY--NLIKTMPSNMKKVDAWSS 689
Query: 181 MLSGGKQVH 189
+L G ++H
Sbjct: 690 LL-GACKIH 697
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 324/646 (50%), Gaps = 73/646 (11%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD--LG 124
++ VS+ ++++A +R A+ ML E + F +VL ACS D LG
Sbjct: 116 RDAVSYNSLISALCLFRRWGHALDALRDML--ADHEVSSFTLVSVLLACSHLADQGHRLG 173
Query: 125 RLIHERI--------TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGN 174
R H RE+ + N LL MY + G + ++LF +S+ A G+
Sbjct: 174 REAHAFALKHGFLDKGRERFPF-----NALLSMYARLGLVDDAQRLF--FSSGAG--VGD 224
Query: 175 VALWNSMLS----GGK-----QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+ WN+M+S GG+ QV V G + VT S + + + G +
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
F+ + D ++ + F SALVDMY++ + AR++FD +
Sbjct: 285 FVLKDDDLA----------ANSFVASALVDMYASNEQVSHARRVFDMVPEHGR----QLG 330
Query: 286 LWNSMISGYVLNE-QNEEAITLLSHIHSSGMCIDS-YTFTSALKACINLLNFNSRFALQV 343
+WN+MI GY + +EEAI L S + + C S T L AC F + A V
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEA--V 388
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG +V + V + L+D+YARLG + A +F + +D+V+W+ LI GC GL
Sbjct: 389 HGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLI 448
Query: 404 SLAYLLFRDMI---------------NSNQD-----VNQFIISSVLKVCSCLASLRRGKQ 443
S A+ L R+M +++ D N + ++L C+ LA+ RGK+
Sbjct: 449 SEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKE 508
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H + V+ E + ++L+DMY KCG + A+F +P R+V++W +I+ G +G
Sbjct: 509 IHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGL 568
Query: 504 AKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
EA+A F M+ PNE+TF+ L+AC H+GLV+ +F MK +YG EP +
Sbjct: 569 GDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLH 628
Query: 563 YCMVDLLGQAGCFDDAEQLIAEM-PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
C+VD+LG+AG D+A +I+ M P + + W++ML AC H N KL I AE+L
Sbjct: 629 ACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELE 688
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
P++ S YV+L N+Y+ G+W++ ++VR ++ G K+ G SWIE+
Sbjct: 689 PDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIEL 734
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 242/566 (42%), Gaps = 103/566 (18%)
Query: 20 KQGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLF--DEMARKNIVSWTT 74
+ G+ H +K+G ++ F N LLSMYA ++DA +LF ++V+W T
Sbjct: 171 RLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNT 230
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR- 133
M++ R A+++ M+ G V P+G +++ L ACS L +GR +H + +
Sbjct: 231 MISLLVQGGRCEEAVQVLYDMVALG-VRPDGVTFASALPACSRLELLGVGREVHAFVLKD 289
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG------- 184
+ L ++ + + L+DMY ++ R++FD + +WN+M+ G
Sbjct: 290 DDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGR----QLGMWNAMICGYAQHGGM 345
Query: 185 --------------------------------------GKQ-VHAFCVKRGFEKEDVTLT 205
GK+ VH + VKR
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN 405
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+L+DMY + G +D+ +F + RD+VSW +I GC ++ E
Sbjct: 406 ALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIV---------------QGLISE 450
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI-DSYTFTS 324
A +L + + L +S SG + E ++ ++ C+ ++ T +
Sbjct: 451 AFQLVRE-----------MQLPSSAASGETMLEGDDTSV-------DGQRCMPNNITLMT 492
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
L C +L +R ++HG V E D VGS L+D+YA+ G + A +F RLP+
Sbjct: 493 LLPGCA-VLAAPAR-GKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
++V+ W+ LIM HGL A LF M+ N N+ + L CS + RG +
Sbjct: 551 RNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE 610
Query: 444 VHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP--ERDVVSWTGIIVGCG 499
+ +KR GFE ++D+ + G +D+ + M E V +W+ ++ C
Sbjct: 611 LFQ-GMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACR 669
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEIT 525
+ K + + + L+P+E +
Sbjct: 670 LHRNVKLGRIAAERLFE--LEPDEAS 693
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + +GK +H +++ L D+ G+ L+ MYA L A +FD + R+N+++W
Sbjct: 497 CAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITW 556
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
++ AY + + A+ L++ M+ G PN + A L ACS SG +D G + + +
Sbjct: 557 NVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMK 616
Query: 133 RE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLSGGKQVH 189
R+ E L ++D+ + G +L + Y ++ A G V+ W++ML G ++H
Sbjct: 617 RDYGFEPTPYLHACVVDVLGRAG----RLDEAYGIISSMAPGEHQVSAWSTML-GACRLH 671
Query: 190 ------AFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+R FE E + L ++Y G ++ + M +R V G
Sbjct: 672 RNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPG 728
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 63/326 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++H ++K ++ + F N L+ MYA +++AH +F + ++I
Sbjct: 373 LPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDI 432
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE-------------------PNGFMYSA 110
VSW T++T + A +L M S PN
Sbjct: 433 VSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMT 492
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS--- 165
+L C++ G+ IH R LE D + + L+DMY KCG +L R +FD+
Sbjct: 493 LLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRN 552
Query: 166 ----NWAASAYG-------NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
N AYG +AL++ M++ G+ +VT + +
Sbjct: 553 VITWNVLIMAYGMHGLGDEALALFDRMVANGEAT----------PNEVTFIAALAACSHS 602
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G +D GL LF M +RD FE + + + +VD VL A +L + Y
Sbjct: 603 GLVDRGLELFQGM-KRDY---------GFEPTPYLHACVVD------VLGRAGRLDEAYG 646
Query: 275 SWAASAYG--NVALWNSMISGYVLNE 298
++ A G V+ W++M+ L+
Sbjct: 647 IISSMAPGEHQVSAWSTMLGACRLHR 672
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 310/679 (45%), Gaps = 137/679 (20%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
+ +A +F+ M KN VSWT ++TAY N N A ++N + +PN Y+A++
Sbjct: 71 IKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKI-----PDPNVASYNAMIT 125
Query: 114 ACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
A H R ++ + F+ +S+
Sbjct: 126 A------------YHRR------------------------NMVDEAFELFSSMPQR--- 146
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTS---LIDMYLKCGEIDDGLALFNFMPER 230
N + +M++G F + +E + S LI+ Y K G ++D + +F+ M E+
Sbjct: 147 NSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEK 206
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNV--LCEARKLFDQYSSWAASAYGNVALWN 288
DVVSW+ +I G C V + EARKLFD+ NV W
Sbjct: 207 DVVSWSSMISGL-----------------CRVGKIVEARKLFDKMPD------RNVVTWT 243
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI GY+ ++ L ++ G+ +++ T T L+AC + + +Q+HGL++
Sbjct: 244 LMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGE--GIQIHGLVL 301
Query: 349 TSGYELDYIVGSNLIDLYARL-------------------------------GNVKSALE 377
+ G+++D + +++I +Y+R GN++ A+
Sbjct: 302 SLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVF 361
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGL-------------------------------NSLA 406
LF +P+KDVV+W+ LI G G +A
Sbjct: 362 LFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIA 421
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+ F M+ S N F +S VL + +A L +G Q+HA K E + SL+ M
Sbjct: 422 FHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSM 481
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG +DD L +F ++ +VV++ II G QNG KEA+ F +M L PN ITF
Sbjct: 482 YSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITF 541
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
LGVLSAC H GLVEE F M+ Y ++P +HY CMVDLL +AG FD+A L++ MP
Sbjct: 542 LGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMP 601
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
F P + +W ++L A TH + + A+ L P + YV+LSN+++ G
Sbjct: 602 FDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHEL 661
Query: 647 VRKAGKKLGEKKA-GMSWI 664
+R K G KK+ G SWI
Sbjct: 662 IRLMKKSRGLKKSPGCSWI 680
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L CG +G +H ++ G D + N++++MY+ S++ A K FD M +K+I
Sbjct: 281 LEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDI 340
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD----LGR 125
V+W +++T Y + A+ L+ +M + V ++ ++ + G +D L +
Sbjct: 341 VTWNSLITGYVQSGNLEKAVFLFENMPQKDVVS-----WTTLICGFASEGRIDEFIGLFQ 395
Query: 126 LIHER------------ITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
++ E+ ++ E+ E +L +K + T SA
Sbjct: 396 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSC-------VLSAGA 448
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
++A+ N G Q+HA K E + SL+ MY KCG +DD L +F ++ +VV
Sbjct: 449 SMAILNQ----GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVV 504
Query: 234 SWTGIIVG 241
++ II G
Sbjct: 505 AYNTIITG 512
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
+ +DI T N+L++ Y +L A LF+ M +K++VSWTT++ + S R + I L+
Sbjct: 336 VKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQ 395
Query: 94 HMLEYGS------------------------------VEPNGFMYSAVLKACSLSGDLDL 123
M E + ++PN F S VL A + L+
Sbjct: 396 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQ 455
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
G IH +T+ +E D + N+L+ MY KCG++ D + NV +N++++
Sbjct: 456 GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVD----DALKMFYYIKVPNVVAYNTIIT 511
Query: 184 G------GKQVHAFCVKRGFE---KEDVTLTSLIDMYLKCGEIDDGLALFNFM------- 227
G GK+ K + +T ++ + G +++G F+ M
Sbjct: 512 GLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQ 571
Query: 228 PERD 231
PE D
Sbjct: 572 PEPD 575
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ QG +H + K + D+ N+L+SMY+ +++DA K+F + N+V++ T++T
Sbjct: 453 LNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITG 512
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N A+ ++ M + + PN + VL AC G ++ GR
Sbjct: 513 LAQNGLGKEALEIFTKMQD-DYLVPNHITFLGVLSACVHVGLVEEGR 558
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 249/460 (54%), Gaps = 24/460 (5%)
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY K GEI + +A FN MP R+++S +I G + L A K+
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILING---------------HVQHGDLDSAIKV 45
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ NVA WN+M+SG + E NE + L +H G D +T S L+ C
Sbjct: 46 FDEMLER------NVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGC 99
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L S QVH ++ GYE + +VGS+L +Y + G++ ++ + ++VVA
Sbjct: 100 AGLRA--SYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVA 157
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G ++G L+ M S ++ + SV+ + LA+L +G+Q+HA +
Sbjct: 158 WNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAI 217
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K G L+SLI MY KCG ++D + D V W+ +I G +GR +EA+
Sbjct: 218 KAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVH 277
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F++M Q L N++TFL +L AC H GL E+ F M +YGL+P LEHY C+VDLL
Sbjct: 278 LFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLL 337
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G++GC D+AE +I MP + D IW ++L AC H N + + AE++L +P+D + YV
Sbjct: 338 GRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYV 397
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+LSN++A+ W +SKVR + KK G+SW+EV +
Sbjct: 398 LLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKN 437
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 185/427 (43%), Gaps = 53/427 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++I + N L++ + L+ A K+FDEM +N+ +W MV+ + + L+ M
Sbjct: 21 RNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREM 80
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
E G + P+ F +VL+ C+ G+ +H + + E++ V+ ++L MY+K GS
Sbjct: 81 HELGFL-PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGS 139
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTS 206
L + A NV WN++++G Q ++ G + +TL S
Sbjct: 140 LG----EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVS 195
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+I + + G + I G + LS+L+ MYS C L ++
Sbjct: 196 VISSSAELATLFQG----------QQIHAEAIKAGA-NSAVAVLSSLISMYSKCGCLEDS 244
Query: 267 RK-LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
K L D + + LW+SMI+ Y + + EEA+ L + G+ + TF S
Sbjct: 245 MKALLD-------CEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSL 297
Query: 326 LKACINLLNFNSRFALQVHGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALELF 379
L AC S L+ G+ ++ Y L + + ++DL R G + A +
Sbjct: 298 LYAC-------SHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMI 350
Query: 380 HRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN-QDVNQFIISSVLKVCSCLAS 437
+P + DVV W L+ C H +A +++ N QD +++ S + AS
Sbjct: 351 RSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIH-----AS 405
Query: 438 LRRGKQV 444
+R K V
Sbjct: 406 AKRWKDV 412
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 135/331 (40%), Gaps = 46/331 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C R+ GK +H ++KYG ++ G++L MY SL + K+ M +N+
Sbjct: 96 LRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNV 155
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W T++ N + LYN M++ + P+ +V+ + + L G+ IH
Sbjct: 156 VAWNTLIAGNAQNGHFEGVLDLYN-MMKMSGLRPDKITLVSVISSSAELATLFQGQQIHA 214
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS------ 183
+ ++++L+ MY KCG L D + + LW+SM++
Sbjct: 215 EAIKAGANSAVAVLSSLISMYSKCGCLE----DSMKALLDCEHPDSVLWSSMIAAYGFHG 270
Query: 184 -GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G + VH F + G DVT SL+ G + G+ F M E+ G+
Sbjct: 271 RGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEK-----YGLKP 325
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG------- 293
+C +VD+ L EA + A +V +W +++S
Sbjct: 326 RLEHYTC-----VVDLLGRSGCLDEAEAMIRSMPLEA-----DVVIWKTLLSACRIHRNA 375
Query: 294 ----------YVLNEQNEEAITLLSHIHSSG 314
LN Q+ LLS+IH+S
Sbjct: 376 DMATRTAEEILRLNPQDSATYVLLSNIHASA 406
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + + ++ QG+ +H IK G + + ++L+SMY+ L D+ K +
Sbjct: 193 LVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE 252
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
+ V W++M+ AY + R A+ L+ M + G + N + ++L ACS +G + G
Sbjct: 253 HPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEG-LGGNDVTFLSLLYACSHNGLKEKGM 311
Query: 125 ---RLIHERI-TREKLEYDTVLMNTL 146
+L+ E+ + +LE+ T +++ L
Sbjct: 312 GFFKLMVEKYGLKPRLEHYTCVVDLL 337
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 330/669 (49%), Gaps = 47/669 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G+++H +++ D+F G +L++MYA + A + F M +N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTT + + + P A+ L M+ G V N + +++L AC+ + IH
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQIH 294
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + ++ D V+ L+ Y G L+ K+F++ A N ++W++ +SG
Sbjct: 295 GMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISGVS 349
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q+ +G D S+ + I+ G L + + + GI
Sbjct: 350 NHSLLRSVQLLRRMFHQGLRPNDKCYASV---FSSVNSIEFGGQLHSSAIKEGFIH--GI 404
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG SAL MYS C+ + ++ K+F++ + W +M++G+ +
Sbjct: 405 LVG---------SALSTMYSRCDNVQDSYKVFEEMQERDGVS------WTAMVAGFATHG 449
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELD 355
+ EA ++ G D + T+ L AC LL +VHG + E
Sbjct: 450 HSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLK-----GKEVHGHTLRVYGETT 504
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+I I +Y++ V++A +F P+KD V WS +I G +G A LF+ M+
Sbjct: 505 FI-NDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVA 563
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ +I SS+L +C+ +A K +H + +K G + +SL+ +Y + G +DD
Sbjct: 564 ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDD 623
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F + D+V+WT II G Q+G ++ A+A F M+Q ++P+ + + VLSAC
Sbjct: 624 SRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLVE+ + F SM+ YG+EP L+HY CMVDLLG++G +A+ + MP KPD +W+
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC H++T L + E + D + LSN+ A G W+ ++++RK K +
Sbjct: 744 TLLAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKGV- 801
Query: 656 EKKAGMSWI 664
K+ G S +
Sbjct: 802 NKEPGWSMV 810
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 269/597 (45%), Gaps = 43/597 (7%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ ++C K GLS + + ++ + A L DA ++F + + V W V+ N
Sbjct: 89 EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
A+ ++ M+ +GS EPN F YS L AC+ +L +GR +H + R EYD +
Sbjct: 149 GEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKRGFE 198
+L++MY KCG + + + + NV W + ++G Q V A + R
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWR----MPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMV 263
Query: 199 KEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVD 255
+ V + + + L C ++ R+ G+++ C AL+
Sbjct: 264 RNGVAINKYTATSILLACAQMS---------MVREASQIHGMVLKTEMYLDCVVKEALIS 314
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y+N + + K+F++ A N ++W++ ISG V N ++ LL + G+
Sbjct: 315 TYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGL 368
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + S + +N + F Q+H + G+ +VGS L +Y+R NV+ +
Sbjct: 369 RPNDKCYASVFSS-VNSIEFGG----QLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDS 423
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F + ++D V+W+ ++ G HG + A+L FR+MI + ++++L C+
Sbjct: 424 YKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRP 483
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L +GK+VH + R + + I MY KC + +F P +D V W+ +I
Sbjct: 484 ECLLKGKEVHGHTL-RVYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMI 542
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G NG +EAI+ FQ M+ + ++ + +LS C + A + Y +
Sbjct: 543 SGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLC-----ADIARPFYCKPLHGYAI 597
Query: 556 EPHL----EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ + +V + ++G DD+ ++ E+ PD W +++ H +++
Sbjct: 598 KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQ 653
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QV+ G + V + ++DL A+ G ++ AL +F V W+ + G ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LA +FRDM+ + + N F S L C+ L G+ VH ++R E + T
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL++MY KCG++ + F MP R+VVSWT I G Q+ A+ +EM+++ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269
Query: 522 NEITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N+ T +L AC +V EA I +K E L+ ++ ++ G + +E+
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKE--ALISTYTNFGFIELSEK 327
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+ E +++IW++ + H+ + V ++
Sbjct: 328 VFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLL 360
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 319/648 (49%), Gaps = 58/648 (8%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWT-TMVTAYTSNKRPNWAIRLYNHMLEYGS 100
+ L +Y + AH L +M + VS++ +++ +YT A+ +Y+ M +
Sbjct: 49 HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFDH 108
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
+ F ++A KAC+ GR +H R DT + N L+ MY+ CG +
Sbjct: 109 LT---FPFAA--KACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK----------------EDV 202
+F N V WN++++G CVK G+ + +
Sbjct: 164 AVFGAMRNR------TVVSWNAVIAG-------CVKNGYAERALEVFGEMAADGVGIDRA 210
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T+ S++ + +++ G A+ + ++ + + + +AL+DMY C
Sbjct: 211 TVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAV-----------KNALIDMYGKCRS 259
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC-IDSYT 321
L +AR++FD +V W +MI YVLN++ EAI+L + SG + T
Sbjct: 260 LEDARRVFDH-----CKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVT 314
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
L AC ++ + + A H L + G + D V + LID YAR G +K R
Sbjct: 315 MVYLLSACASMPS--GKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER 372
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ W+ + G T G A LF+ MI + + ++S+L + A L+ G
Sbjct: 373 GSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEG 431
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K +H F + GF + T LID+Y K G++D ALF+++PE+DVV+WT II G G +
Sbjct: 432 KNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIH 491
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G A+ AI + M++S KPN +T +L AC HAG+++E +F M+ +GL P+ EH
Sbjct: 492 GHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEH 551
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y C+VD+LG+AG ++A +LI +MPF+P ++W ++L AC H N + + A++L
Sbjct: 552 YSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLD 611
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
PE+ YV+L N+YA W + VR+ + G K+ G S +E S
Sbjct: 612 PENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 217/536 (40%), Gaps = 104/536 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + C R + G+++HCR + G D + N L+SMY + A +F M +
Sbjct: 114 AAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRT 173
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++ N A+ ++ M G V + +VL AC+ + DL+ GR +H
Sbjct: 174 VVSWNAVIAGCVKNGYAERALEVFGEMAADG-VGIDRATVVSVLPACAQAKDLNTGRAVH 232
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------WAA---------SA 171
+ + L + N L+DMY KC SL R++FD + W A A
Sbjct: 233 RLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRA 292
Query: 172 YGNVALWNSMLSGG-------------------------KQVHAFCVKRGFEKEDVTLTS 206
+ ++L ML G K HA C++ G + + T+
Sbjct: 293 FEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETA 352
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LID Y +CG++ L ER
Sbjct: 353 LIDAYARCGKMK----LMRLTLER------------------------------------ 372
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
SW A WN+ +SGY ++ + ++AI L + + + DS T S L
Sbjct: 373 -------GSWRAET------WNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASIL 419
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
A + +H ++T G+ + + LID+Y++ G++ +A LF LP+KD
Sbjct: 420 PAYAESADLKE--GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKD 477
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VVAW+ +I G HG A LL+ M+ S N I+++L CS + G +V
Sbjct: 478 VVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-- 535
Query: 447 FCVKR---GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
F R G + L+DM + G I++ L + MP E W ++ C
Sbjct: 536 FKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGAC 591
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 168/447 (37%), Gaps = 106/447 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C Q + + G+++H + GL + N L+ MY SL DA ++
Sbjct: 207 IDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRV 266
Query: 61 FDEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD K++VSWT M+ AY N R AI L ML G+ PNG +L AC+
Sbjct: 267 FDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMP 326
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-RKLFDQYSNWAASAYGNVALW 178
+ H R L+ D + L+D Y +CG + +L + +W A + N AL
Sbjct: 327 SGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETW-NAALS 385
Query: 179 NSMLSG---------------------------------------GKQVHAFCVKRGFEK 199
+SG GK +H F + GF +
Sbjct: 386 GYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLR 445
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
T LID+Y K G++D ALF ++PE+DVV+WT II G
Sbjct: 446 STEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAG------------------ 487
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
Y ++ AI L + SG ++
Sbjct: 488 ----------------------------------YGIHGHARTAILLYDRMVESGGKPNT 513
Query: 320 YTFTSALKACINLLNFNSRFAL-----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
T + L AC + + + VHGL+ + S L+D+ R G ++
Sbjct: 514 VTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHY------SCLVDMLGRAGRIEE 567
Query: 375 ALELFHRLP-KKDVVAWSGLIMGCTKH 400
A L +P + W L+ C H
Sbjct: 568 AHRLIQDMPFEPSTSVWGALLGACVLH 594
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 6/254 (2%)
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS-GLIMGCTKHGLNSLA 406
+TSG+ L Y L +Y G SA L ++P+ V++S L+ T G + A
Sbjct: 37 LTSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREA 96
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
++ M + + K C+ L R G+ VH + GF + +LI M
Sbjct: 97 LAVYSAM----RAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISM 152
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+ CG++ A+F M R VVSW +I GC +NG A+ A+ F EM + + T
Sbjct: 153 YMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATV 212
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VL AC A + + ++ + GL ++ ++D+ G+ +DA ++
Sbjct: 213 VSVLPACAQAKDLNTGRAVHRLVE-DKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCK 271
Query: 587 FKPDKTIWASMLKA 600
D W +M+ A
Sbjct: 272 HDKDVVSWTAMIGA 285
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 330/669 (49%), Gaps = 47/669 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G+++H +++ D+F G +L++MYA + A + F M +N
Sbjct: 67 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 126
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTT + + + P A+ L M+ G V N + +++L AC+ + IH
Sbjct: 127 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQIH 185
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + ++ D V+ L+ Y G L+ K+F++ A N ++W++ +SG
Sbjct: 186 GMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISGVS 240
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q+ +G D S+ + I+ G L + + + GI
Sbjct: 241 NHSLLRSVQLLRRMFHQGLRPNDKCYASV---FSSVNSIEFGGQLHSSAIKEGFIH--GI 295
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG SAL MYS C+ + ++ K+F++ + W +M++G+ +
Sbjct: 296 LVG---------SALSTMYSRCDNVQDSYKVFEEMQERDGVS------WTAMVAGFATHG 340
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELD 355
+ EA ++ G D + T+ L AC LL +VHG + E
Sbjct: 341 HSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLK-----GKEVHGHTLRVYGETT 395
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+I I +Y++ V++A +F P+KD V WS +I G +G A LF+ M+
Sbjct: 396 FI-NDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVA 454
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ +I SS+L +C+ +A K +H + +K G + +SL+ +Y + G +DD
Sbjct: 455 ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDD 514
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F + D+V+WT II G Q+G ++ A+A F M+Q ++P+ + + VLSAC
Sbjct: 515 SRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 574
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLVE+ + F SM+ YG+EP L+HY CMVDLLG++G +A+ + MP KPD +W+
Sbjct: 575 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 634
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L AC H++T L + E + D + LSN+ A G W+ ++++RK K +
Sbjct: 635 TLLAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKGV- 692
Query: 656 EKKAGMSWI 664
K+ G S +
Sbjct: 693 NKEPGWSMV 701
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 138/578 (23%), Positives = 260/578 (44%), Gaps = 47/578 (8%)
Query: 44 LLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP 103
++ + A L DA ++F + + V W V+ N A+ ++ M+ +GS EP
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEP 59
Query: 104 NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQ 163
N F YS L AC+ +L +GR +H + R EYD + +L++MY KCG + + +
Sbjct: 60 NSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREF 119
Query: 164 YSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKRGFEKEDVTLT--SLIDMYLKCGEI 217
+ NV W + ++G Q V A + R + V + + + L C ++
Sbjct: 120 WR----MPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQM 175
Query: 218 DDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
R+ G+++ C AL+ Y+N + + K+F++
Sbjct: 176 S---------MVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE---- 222
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
A N ++W++ ISG V N ++ LL + G+ + + S + +N + F
Sbjct: 223 -AGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS-VNSIEFG 279
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
Q+H + G+ +VGS L +Y+R NV+ + ++F + ++D V+W+ ++ G
Sbjct: 280 G----QLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 335
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
HG + A+L FR+MI + ++++L C+ L +GK+VH + R + +
Sbjct: 336 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTL-RVYGET 394
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
I MY KC + +F P +D V W+ +I G NG +EAI+ FQ M+
Sbjct: 395 TFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVA 454
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP------EYGLEPHLEHYYCMVDLLG 570
+ ++ + +LS C A + + KP + G+ +V +
Sbjct: 455 ASIRIDSYICSSILSLC--ADIARPFYC-----KPLHGYAIKAGILSDQSVSSSLVKVYS 507
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
++G DD+ ++ E+ PD W +++ H +++
Sbjct: 508 RSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQ 544
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
++DL A+ G ++ AL +F V W+ + G ++G LA +FRDM+ + + N
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
F S L C+ L G+ VH ++R E + TSL++MY KCG++ + F
Sbjct: 61 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
MP R+VVSWT I G Q+ A+ +EM+++ + N+ T +L AC +V E
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180
Query: 542 AWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
A I +K E L+ ++ ++ G + +E++ E +++IW++ +
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKE--ALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISG 238
Query: 601 CETHNNTKLVSII 613
H+ + V ++
Sbjct: 239 VSNHSLLRSVQLL 251
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 291/581 (50%), Gaps = 47/581 (8%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERI-----------TREKLEYDTVLMNTLLDMYVKCGSL 156
+S +L +C GDL LG +H + +R L + V N L+ MY +CG
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73
Query: 157 --TRKLFDQYSNWAASAYGNVALWNSMLSGGKQV-HAFCVKRGFEKEDV------TLTSL 207
++FD+ + WNS+++ + A + R + D T T++
Sbjct: 74 EDAARVFDEMR------VRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRATFTTV 127
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEA 266
+ + G +P +V G++V C FE +ALV Y C A
Sbjct: 128 LSECARAGAAS--------LPACAMVH--GLVVSCGFEAEVPVGNALVTAYFECGSPASA 177
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++F A NV W +MISG E +E+ +L + + + ++ T++ L
Sbjct: 178 ERVFHGM------AEKNVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTL 230
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC L +R QVHGL+V +G+E D V S L+D+Y++ G ++ AL +F + D
Sbjct: 231 LACARSLA--AREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPD 288
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V + +++G ++GL A+ LF +M+ + ++++ +S+VL A GKQ+HA
Sbjct: 289 EVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHA 348
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+KR F L++MY KCGE+ + + +F MP ++ VSW II ++G E
Sbjct: 349 LVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSE 408
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
F+ M KP ++TFL +L AC H G ++ I SM +YG+ P +EHY C+V
Sbjct: 409 VYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVV 468
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
D+LG+AG DDA+ I + PF +W +++ AC H N+++ AE+LL P +
Sbjct: 469 DMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTA 528
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
YV+LSN+Y++ G WD +KV K ++G K G SWIE+
Sbjct: 529 AYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIEL 569
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 189/521 (36%), Gaps = 142/521 (27%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYG-----------LSQDIFTGNNLLSMYA 49
++ R L CG+ ++ G +LH ++K L + N L+SMYA
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYA 68
Query: 50 DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYS 109
DA ++FDEM ++ VSW +++ A ++ A+ L+ ML + + ++
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFT 125
Query: 110 AVLKACSLSGDLDLG--RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
VL C+ +G L ++H + E + + N L+ Y +CGS ++F
Sbjct: 126 TVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGM- 184
Query: 166 NWAASAYGNVALWNSMLSG----------------------------------------- 184
A NV W +M+SG
Sbjct: 185 -----AEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCTLLACARSLAA 239
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG- 241
G+QVH VK GFE + + L+D+Y KCG ++D L +F E D V T I+VG
Sbjct: 240 REGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGF 299
Query: 242 --------CFEC-----------------------------------------SCFTL-- 250
FE CF +
Sbjct: 300 AQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNT 359
Query: 251 ---SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+ LV+MYS C L E+ ++FD+ S N WNS+I+ + + E L
Sbjct: 360 YVCNGLVNMYSKCGELRESVQVFDEMPS------KNSVSWNSIIAAFARHGHGSEVYQLF 413
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL----- 362
+ + G TF S L AC S GL + + Y V +
Sbjct: 414 ESMKADGAKPTDVTFLSLLHAC-------SHVGSAKKGLEILNSMSSQYGVLPRMEHYAC 466
Query: 363 -IDLYARLGNVKSALELFHRLPKKD-VVAWSGLIMGCTKHG 401
+D+ R G + A P D + W L+ C+ HG
Sbjct: 467 VVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHG 507
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 347/715 (48%), Gaps = 112/715 (15%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
K+++ I G + + N++ + D LN+A LF++ ++ VS T + ++
Sbjct: 28 KNINPIISASGPYKGCMSKGNVVGGWVD---LNNACILFEKTPKRIGVSITESHRSGCTD 84
Query: 83 ------KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
K + R +E+G P+ + L C G ++LGR H + + L
Sbjct: 85 DPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGL 144
Query: 137 EYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAA-------SAY--------------- 172
D + +L+DMY KCG + +++D+ ++ A SAY
Sbjct: 145 GSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQ 204
Query: 173 -GNVAL------WNSMLS---------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
GN+ +++ML+ GKQ+HA VK + E +L+ +Y KCG
Sbjct: 205 IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGM 264
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCF--------------------ECSCFTLSALVDM 256
+++ +F + +R+++SWT I G + E + FT S ++
Sbjct: 265 MEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVL-- 322
Query: 257 YSNCNVLCEARKLFDQYSS---WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
++C C+ K Q +S W ++ L MI E+ + +L
Sbjct: 323 -ASCG--CDLGKWMKQRTSSNRWGGQHLMSIFLLRKMI------EEGNKPTSLRP----- 368
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ + S LKAC +L + R +H +I+ + +E D + S LI +Y++ G+V+
Sbjct: 369 ----NQFVLPSILKACGHLSD--RRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVE 422
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A +F +P +VV+W+ LI G F M++ + ISS+L C+
Sbjct: 423 KACRVFDWIP--NVVSWNTLIAG-------------FSQMLDQGFCPSSVTISSLLPACT 467
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
+A+LR GK++H + + G EK+ ++L+DMY KCG I + LF MPER+ V+W
Sbjct: 468 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 527
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G +G EAI F +M +S K + +TF VL+AC HAG+VE ++F M+ +Y
Sbjct: 528 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKY 587
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+EP LEHY CMVDLLG+AG +A LI MP +PDK +W ++L AC H N +L +
Sbjct: 588 RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVA 647
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG--KKLGEKKAGMSWIEV 666
AE L PE P ++LSN+YA G W + +K++K +K G K G SWIE
Sbjct: 648 AEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFG-KFPGCSWIEA 701
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 237/554 (42%), Gaps = 87/554 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ AL CG+ ++ G+ HC ++K GL D F +L+ MYA ++ A +++D+M
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ + +++AY N A +++ + G+ PN + YS +L C + G+
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGT-RPNHYTYSTMLAVCGTISAIQEGK 234
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS 183
+H + + + +T + N LL +Y KCG + +F+ N+ W + ++
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQ------RNIISWTASIN 288
Query: 184 G-------GKQVHAFCVKR--GFEKEDVTLT--------------------------SLI 208
G K + F + R G E + T + L+
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLM 348
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVS------------------WTGIIVGCFECSCFTL 250
++L I++G + P + V+ T I+ FE + +
Sbjct: 349 SIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 408
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
SAL+ MYS C + +A ++FD W NV WN++I+G+ S +
Sbjct: 409 SALIYMYSKCGHVEKACRVFD----WIP----NVVSWNTLIAGF-------------SQM 447
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G C S T +S L AC N+ N R ++HG + G E D V S L+D+YA+ G
Sbjct: 448 LDQGFCPSSVTISSLLPACTNVANL--RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCG 505
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A LF+ +P+++ V W+ LI G HG + A LF M S+ ++ ++VL
Sbjct: 506 YISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLN 565
Query: 431 VCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDV 488
CS + G+ + K E ++D+ + G++ + L K MP E D
Sbjct: 566 ACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDK 625
Query: 489 VSWTGIIVGCGQNG 502
W ++ C +G
Sbjct: 626 FVWGALLGACRNHG 639
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 185/488 (37%), Gaps = 161/488 (32%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG +I++GK LH ++K + GN LL++Y+ + +A +F+ + ++NI+SW
Sbjct: 224 CGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISW 283
Query: 73 TTMVTAY-----------------TSNKRPN-----------------W----------- 87
T + + S PN W
Sbjct: 284 TASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWG 343
Query: 88 -----AIRLYNHMLEYG----SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+I L M+E G S+ PN F+ ++LKAC D G +H I + E
Sbjct: 344 GQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFES 403
Query: 139 DTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG------------ 184
D +++ L+ MY KCG + + ++FD W NV WN++++G
Sbjct: 404 DAYIISALIYMYSKCGHVEKACRVFD----WIP----NVVSWNTLIAGFSQMLDQGFCPS 455
Query: 185 -------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
GK++H + + G EK+ ++L+DMY KCG I + LF
Sbjct: 456 SVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFY 515
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
MPER+ V+W +I G Y+N EA +LF+Q
Sbjct: 516 MMPERNTVTWNSLIFG---------------YANHGYCNEAIELFNQM------------ 548
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
EE+ T L H+ TFT+ L AC S + G
Sbjct: 549 ---------------EESDTKLDHL----------TFTAVLNAC-------SHAGMVELG 576
Query: 346 LIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCT 398
+ + Y + L +DL R G + A +L +P + D W L+ C
Sbjct: 577 ESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACR 636
Query: 399 KHGLNSLA 406
HG LA
Sbjct: 637 NHGNIELA 644
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 287/598 (47%), Gaps = 84/598 (14%)
Query: 139 DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFC 192
+T L+NTL+ Y + G L R++FD+ + N +N++LS G+ A
Sbjct: 794 ETFLLNTLVSAYARLGRLPDARRVFDEIP------HPNTFSYNALLSAHARLGRPADARA 847
Query: 193 VKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVV------------------ 233
+ D + ++I + D L M D V
Sbjct: 848 LFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKD 907
Query: 234 SWTGIIVGCFECS------CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
S TG+ V + SAL+DMY+ C EAR++F+ A N+ W
Sbjct: 908 SRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFE------AMPERNIVSW 961
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
NS+I+ Y N EA+ L + +G D T S + AC L R QVH +
Sbjct: 962 NSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAA--DREGRQVHARV 1019
Query: 348 VTSG-YELDYIVGSNLIDLYARLG-------------------------------NVKSA 375
V S + D ++ + L+D+YA+ G NV+ A
Sbjct: 1020 VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDA 1079
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F ++ +K+V+AW+ LI ++G A LF + + + +VL C +
Sbjct: 1080 QMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNV 1139
Query: 436 ASLRRGKQVHAFCVKRGF------EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
A L+ G+Q H +K GF E + SL+DMYLK G IDDG +F+ M RD V
Sbjct: 1140 ADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNV 1199
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +IVG QNGRAK+A+ F+ M+ S+ P+ +T +GVLSAC H+GLVEE F SM
Sbjct: 1200 SWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSM 1259
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++G+ P +HY CM+DLLG+AG + E+LI EM +PD +WAS+L +C H N ++
Sbjct: 1260 TEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEM 1319
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A +L P + YV+LSN+YA LG W + +VR + K G K+ G SWIE+
Sbjct: 1320 GEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEI 1377
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/633 (27%), Positives = 303/633 (47%), Gaps = 68/633 (10%)
Query: 39 FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
F N + A S+ DA +LFD M ++ SW ++TA + P+ A+ L+++M
Sbjct: 86 FLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL 145
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT- 157
G + P ++VL C+ DL R +H I + + + +L L+D+Y C L
Sbjct: 146 G-IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 158 -RKLFDQ------------YSNWAASAYGNVALW-------------------------- 178
R+ FD + + G++A+
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+ L G+ +HAF ++ G+E +S++DMY KCG +D +LFN P +D+V T I
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ G ++C + +A+++F+ N+ WN+M++GY+ +
Sbjct: 325 VSG---------------LASCGRIADAKRVFEGMKER------NLVSWNAMLTGYIRSM 363
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
A+ L + D+ T S L AC +L+ +VH + G+ I+
Sbjct: 364 DLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGK--GEEVHAFAIKCGFFSSPIL 421
Query: 359 GSNLIDLYARLGNVKSA--LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+ L+ +Y++ G ++SA L LF ++D +W+ LI G +H ++ A M S
Sbjct: 422 KNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QS 480
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
NQ SS L C+ + L++G Q+HA+ +++G+E +DI + LIDMY KC + D
Sbjct: 481 EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYS 540
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
+ +F+ P RDV+ W +I GC +G+ + + F EM + +K + +TFLG L +C
Sbjct: 541 IRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISE 600
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
G V + FT M E + P +EHY CM++LLG+ GC + E + MPF+P +W
Sbjct: 601 GHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLR 659
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+ C + N KL A+ + ++P P ++V
Sbjct: 660 IFDCCREYGNRKLGERAAKCINDSNPLTPVQFV 692
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 216/476 (45%), Gaps = 62/476 (13%)
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
+K F E L +L+ Y + G + D +F+ +P + F+ +A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNT---------------FSYNA 831
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+ ++ +AR LF +Y N++I+ + + +A+ L+ +H+
Sbjct: 832 LLSAHARLGRPADARALFHAIPDPDQCSY------NAVIAALAQHSRGADALLFLAAMHA 885
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+++Y+F SAL AC +SR +QVH L+ S + D +GS L+D+YA+
Sbjct: 886 DDFVLNAYSFASALSACA--AEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWP 943
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+ A +F +P++++V+W+ LI ++G A +LF M+ + ++ ++SV+ C
Sbjct: 944 EEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSAC 1003
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGE------------------- 472
+ LA+ R G+QVHA VK +ED+ L+ +L+DMY KCG
Sbjct: 1004 AGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSE 1063
Query: 473 ------------IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
++D +F M E++V++W +I QNG +EA+ F + + +
Sbjct: 1064 TSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVW 1123
Query: 521 PNEITFLGVLSACRHA-----GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
P T+ VL+AC + G + + ++G E + +VD+ + G
Sbjct: 1124 PTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 1183
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
DD ++ M + D W +M+ + K + E++L S E P M+
Sbjct: 1184 DDGAKVFERMAAR-DNVSWNAMIVGHAQNGRAKDALHLFERML-CSKESPDSVTMI 1237
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/554 (24%), Positives = 228/554 (41%), Gaps = 114/554 (20%)
Query: 30 IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAI 89
+K + F N L+S YA L DA ++FDE+ N S+ +++A+ RP A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 90 RLYNHMLE-----YGSVEP-------------------------NGFMYSAVLKACSLSG 119
L++ + + Y +V N + +++ L AC+
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSNWAASAYGNVAL 177
D G +H +++ D + + LLDMY KC R++F+ A N+
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFE------AMPERNIVS 960
Query: 178 WNSMLS--------------------------------------------GGKQVHAFCV 193
WNS+++ G+QVHA V
Sbjct: 961 WNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVV 1020
Query: 194 KRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
K +ED+ L+ +L+DMY KCG +F+ M R VVS T +I G + SA
Sbjct: 1021 KSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITG------YARSA 1074
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
V+ +A+ +F Q NV WN +I+ Y N + EEA+ L +
Sbjct: 1075 NVE---------DAQMVFSQMVE------KNVIAWNVLIAAYAQNGEEEEALRLFVRLKR 1119
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY------IVGSNLIDLY 366
+ YT+ + L AC N+ + + Q H ++ G+ D+ VG++L+D+Y
Sbjct: 1120 ESVWPTHYTYGNVLNACGNVADL--QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ G++ ++F R+ +D V+W+ +I+G ++G A LF M+ S + + +
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMI 1237
Query: 427 SVLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
VL C + G++ + G T +ID+ + G + + L K M
Sbjct: 1238 GVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSM 1297
Query: 485 ERDVVSWTGIIVGC 498
E D V W ++ C
Sbjct: 1298 EPDAVLWASLLGSC 1311
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 229/541 (42%), Gaps = 73/541 (13%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
E L CG R+ LH I K ++ G L+ +Y + L DA + FD++
Sbjct: 162 AECLDLCGARQ-------LHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILE 214
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
N +SW +V Y + A+ ++ ML G V P G+ S + AC + L+ GR
Sbjct: 215 PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAG-VRPLGYTVSHAVLACRDNNALEEGRC 273
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + R E+ + ++++DMY KCG++ + LF+ + ++ + S++SG
Sbjct: 274 IHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFN------LAPMKDMVMSTSIVSG 327
Query: 185 ----GKQVHAFCVKRGF-EKEDVTLTSLIDMYLKCGEIDDGLALFNFM----PERDVVSW 235
G+ A V G E+ V+ +++ Y++ ++ L LF M E D ++
Sbjct: 328 LASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITL 387
Query: 236 TGIIVGC----------------FECSCFTLSAL----VDMYSNCNVLCEARKLF----- 270
++ C +C F+ L V MYS C L A +L
Sbjct: 388 GSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMG 447
Query: 271 ---DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
D YS WNS+ISGY + +E A+ L+ + S + + TF+SAL
Sbjct: 448 SERDSYS------------WNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALA 494
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC N+ F + +Q+H ++ GYE+D I+ S LID+Y + ++ +F P +DV
Sbjct: 495 ACANI--FLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDV 552
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
+ W+ +I GC G LF +M + L C +R G+
Sbjct: 553 ILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTL 612
Query: 448 CVKRGFEKEDITLTSLIDMYLKCG---EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
+ +I++ K G E++D + F P W I C + G
Sbjct: 613 MMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPT--TAMWLRIFDCCREYGNR 670
Query: 505 K 505
K
Sbjct: 671 K 671
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 242/548 (44%), Gaps = 83/548 (15%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLE-------YDTVLMNTLLDMYVKCGSLT-- 157
+Y+++L+ + G L R I + T L N ++ CGS+
Sbjct: 45 LYASLLRLATSHGSLSAARRIATHLAASSSASSTSRSSVPTFLFNRAIESLAACGSVADA 104
Query: 158 RKLFD-----QYSNW-----AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
R+LFD +W A+S G+ + S+ S + G +D T+ S+
Sbjct: 105 RELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL-------GIRPKDATMASV 157
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ +C ++ L + +RD S +I+G +ALVD+Y NC +L +AR
Sbjct: 158 LSCCAECLDLCGARQLHGHIAKRDFQS--NVILG---------TALVDVYGNCFLLADAR 206
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+ FD N WN ++ Y L + A+ + + S+G+ YT + A+
Sbjct: 207 RAFDDILE------PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVL 260
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD- 386
AC + N +H ++ GYE V S+++D+YA+ G + +A LF+ P KD
Sbjct: 261 ACRD--NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDM 318
Query: 387 ------------------------------VVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
+V+W+ ++ G + + A LLF+ M
Sbjct: 319 VMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQE 378
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
++ + + SVL C+ + + +G++VHAF +K GF I +L+ MY KCG +
Sbjct: 379 TREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSA 438
Query: 477 --LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
L LF+ ERD SW +I G ++ ++ A+ +M QS + PN+ TF L+AC
Sbjct: 439 ERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACA 497
Query: 535 HAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
+ L+++ I M + Y ++ L ++D+ + FD + ++ P + D +
Sbjct: 498 NIFLLKQGMQIHAYMIRKGYEIDDILRS--VLIDMYCKCRQFDYSIRIFEARPSR-DVIL 554
Query: 594 WASMLKAC 601
W SM+ C
Sbjct: 555 WNSMIFGC 562
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 184/477 (38%), Gaps = 145/477 (30%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + + G +H + K ++D++ G+ LL MYA +A ++F+ M +N
Sbjct: 898 ALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERN 957
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGDLDLGRLI 127
IVSW +++T Y N A+ L+ M++ G V P+ ++V+ AC+ L+ D + GR +
Sbjct: 958 IVSWNSLITCYEQNGPVGEALVLFVSMMKAGFV-PDEVTLASVMSACAGLAADRE-GRQV 1015
Query: 128 HERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASA- 171
H R+ + ++ D VL N L+DMY KCG R +FD+ ++ +A SA
Sbjct: 1016 HARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSAN 1075
Query: 172 ------------YGNVALWNSMLSGGKQ-------------------------------- 187
NV WN +++ Q
Sbjct: 1076 VEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNA 1135
Query: 188 ------------VHAFCVKRGF------EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
H +K GF E + SL+DMYLK G IDDG +F M
Sbjct: 1136 CGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 1195
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD VSW +IVG
Sbjct: 1196 RDNVSWNAMIVG------------------------------------------------ 1207
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRF---ALQVH 344
+ N + ++A+ L + S DS T L AC L+ R+ + H
Sbjct: 1208 ----HAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDH 1263
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G+I + + + +IDL R G++K EL + + D V W+ L+ C H
Sbjct: 1264 GIIPSQDHY------TCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 85/315 (26%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLN---------- 55
+ A+ C ++++G+ +H ++++G + ++++ MYA +++
Sbjct: 255 VSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAP 314
Query: 56 ---------------------DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
DA ++F+ M +N+VSW M+T Y + A+ L+
Sbjct: 315 MKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQ 374
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M + + E + +VL AC+ D+ G +H + +L N L+ MY KCG
Sbjct: 375 MRQE-TREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCG 433
Query: 155 SLTRK----LFDQYSNWAASAYGNVALWNSMLSG-------------------------- 184
L LF+ S + + WNS++SG
Sbjct: 434 CLRSAERLLLFEMGSERDSYS------WNSLISGYERHSMSEAALYALTKMQSEVTPNQS 487
Query: 185 -----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G Q+HA+ +++G+E +D+ + LIDMY KC + D + +F
Sbjct: 488 TFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEAR 547
Query: 228 PERDVVSWTGIIVGC 242
P RDV+ W +I GC
Sbjct: 548 PSRDVILWNSMIFGC 562
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 196/690 (28%), Positives = 331/690 (47%), Gaps = 91/690 (13%)
Query: 17 RSIKQGKSLHCRI-----IKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVS 71
+++ LHC + K +S D++T N +S +N+A LFD M ++NIV+
Sbjct: 41 KNLSPPPHLHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVT 100
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE-- 129
W +M+T Y + A +L++ M + V N M S + +C GR + E
Sbjct: 101 WNSMITGYVRRREMAKARKLFDEMPDRDVVSWN-LMISGYV-SCQ-------GRWVEEGR 151
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ E E D V NT++ Y + G + +LFD NV WN+M++G
Sbjct: 152 HLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQE------RNVVSWNAMVTG--- 202
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+L+ G+++ + F MPERD S + ++ G +
Sbjct: 203 -----------------------FLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGE 239
Query: 248 FTLSALV------------DMYSNCNVLC----------EARKLFDQYSSWAASAYG--- 282
+ + D+ N+L +AR+LFDQ +
Sbjct: 240 LDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGR 299
Query: 283 ---NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
NV WNSMI YV A L + D+ ++ + + + + + +
Sbjct: 300 FERNVVSWNSMIMCYVKARDIFSARVLFDQMKER----DTISWNTMISGYVRMSDMEEAW 355
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
++ D + +++I +A+ GN++ A LF +P+K++V+W+ +I G
Sbjct: 356 ------MLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYEN 409
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+G A L+R M+ + ++ +SSVL VCS A+L G Q+H K I
Sbjct: 410 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPIN 469
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
SLI MY +CG I + +F + +++V+SW +I G +G A +A+ F+ M + +
Sbjct: 470 -NSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLK 528
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++P ITF+ VL+AC HAG V+E F SM E+G+EP +EH+ +VD++G+ G ++A
Sbjct: 529 VRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEA 588
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
LI MPF+PDK +W ++L AC HNN +L + AE L+ PE + YV+L N+YA +
Sbjct: 589 MDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADV 648
Query: 639 GMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
G WD+ +++R ++ K+ G SW++ S
Sbjct: 649 GQWDNATEMRMMMERNNIRKQPGYSWVDSS 678
>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
Length = 811
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 318/659 (48%), Gaps = 53/659 (8%)
Query: 6 IVEALRHCGQRRS--IKQGKSLHCR-------------IIKYGLSQDIFTGNNLLSMYAD 50
+V ++ C + S + QG+ LH R + +D L+ MY+
Sbjct: 13 LVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVATALVDMYSK 72
Query: 51 FTSLNDAHKLFDEMA--RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMY 108
SL+DA ++FD+ + K + WT MV+ Y + A+ LY L S P+ M
Sbjct: 73 CGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSEPPDTVML 132
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN 166
+ + ACS + LD GR IH +I+ +L++ T L N L++MY +C L RK F++ +
Sbjct: 133 LSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAFEKITA 192
Query: 167 WAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKEDVTLTSLIDMYL--KCGEIDDG 220
N+ WN ++ G + HA + + + E V ++ +++ CG ++
Sbjct: 193 ------KNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVE-- 244
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
A + + +G+ E F S+LV+ Y C L EA+++FD
Sbjct: 245 -AAGDVRRIHKKLELSGL-----EWDVFVASSLVNAYGKCGCLAEAKRVFDTMP------ 292
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
N SM++ Y + EEA+ + + S G D TF SAL AC ++ + A
Sbjct: 293 LKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRA 352
Query: 341 LQVHGLIVTSG--YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+H ++ SG + D ++G+ L+++Y R G + +A LF + K+ + W+ L+
Sbjct: 353 --IHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYA 410
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ G A L+ M + N ++L CS + +L +G+ HA GFEKE
Sbjct: 411 QWGYGKEALNLYHSM---DAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVE 467
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+L++MY KCG ++D L F + + VV+WT ++ +G +E + F EM
Sbjct: 468 VGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDG 527
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ P+ + L L AC H+G ++E + FT+M +YG+ P L HY C+VDLL + G A
Sbjct: 528 VAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRA 587
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNT-KLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
E+LI MPF+P W ++L AC TH+ + A++ L T P + Y LS +Y+
Sbjct: 588 EELIDSMPFEPSAVTWTTLLAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYS 646
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 222/513 (43%), Gaps = 46/513 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ A+ C + G+++H +I L GN L++MY L+ A K F
Sbjct: 128 DTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAF 187
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LS 118
+++ KN+VSW ++ AY A+ L+ M G V + + VL AC +
Sbjct: 188 EKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEG-VAADAVTFLHVLDACGGVEAA 246
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
GD+ R IH+++ LE+D + ++L++ Y KCG L +++FD N
Sbjct: 247 GDV---RRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMP------LKNTV 297
Query: 177 LWNSMLSGGKQ---------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
SML+ Q ++ +G + + VT S +D G + G A+ + +
Sbjct: 298 TMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRL 357
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
++ +++G +AL++MY C VL A+ LFD A N W
Sbjct: 358 LVSGIIQQPDVVLG---------TALLNMYGRCGVLDAAKSLFD------GMADKNTITW 402
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N+++ Y +EA+ L HS +S TF + L AC + A H +
Sbjct: 403 NALMGSYAQWGYGKEALNLY---HSMDAQPNSLTFLAMLTACSTVGALLQGRA--AHARL 457
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+G+E + VG L+++Y + G+++ AL F +L +K VV W+ ++ HG
Sbjct: 458 APAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETL 517
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDM 466
LF +M + + + L CS L+ G+ ++ G ++D+
Sbjct: 518 RLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDL 577
Query: 467 YLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ G + L MP E V+WT ++ C
Sbjct: 578 LCRTGLLGRAEELIDSMPFEPSAVTWTTLLAAC 610
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 261/489 (53%), Gaps = 39/489 (7%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ G+++H+ E + V + L+ MY+ CG++ +G +F+ + V W ++ G
Sbjct: 117 IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNG 176
Query: 242 CFECSCF--TLSALVDMYS-NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ F +LS M + ARKLFD+ +V WNSMISGYV N
Sbjct: 177 YAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGD------RDVISWNSMISGYVSNG 230
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+E+ + L + G+ D T S ++ +
Sbjct: 231 LSEKGLDLFEQMLLLGINTDLATMVS-----------------------------VELTL 261
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ L+D+Y++ GN+ SA+++F + ++ VV+W+ +I G + GL+ ++ LF +M +
Sbjct: 262 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
N ++ +L C+ LA+L RG+++H ++ GF + +L+DMYLKCG +
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
LF +PE+D+VSWT +I G G +G EAIA F EM S ++P+E++F+ +L AC H+GL
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++E W F M+ +EP EHY C+VDLL +AG A + I MP +PD TIW ++L
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
Query: 599 KACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLGEK 657
C +++ KL +AE + PE+ YV+L+N+YA W+ + K+R + G++ K
Sbjct: 502 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 561
Query: 658 KAGMSWIEV 666
G SWIE+
Sbjct: 562 NPGCSWIEI 570
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 176/471 (37%), Gaps = 139/471 (29%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
++LR L+ C +SI+ G+ +H I + D G+ L+ MY L + ++
Sbjct: 99 LELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG--SVEPNGFMY---------- 108
FD++A + + W ++ Y ++ L+ M E G VE ++
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218
Query: 109 -SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM--------NTLLDMYVKCGSLTR- 158
++++ +G + G + E++ + D M N LLDMY K G+L
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSA 278
Query: 159 -KLFDQYS-----NWAASAYG---------NVALWNSM---------------------- 181
++F+ +W + G +V L++ M
Sbjct: 279 IQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASL 338
Query: 182 --LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
L G+++H ++ GF + +L+DMYLKCG + LF+ +PE+D+VSWT +I
Sbjct: 339 AALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMI 398
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
G + YG+
Sbjct: 399 AG----------------------------------YGMHGYGS---------------- 408
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EAI + + +SG+ D +F S L AC H ++ G+ ++
Sbjct: 409 --EAIAAFNEMRNSGIEPDEVSFISILYAC-------------SHSGLLDEGWGFFNMMR 453
Query: 360 SN------------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGC 397
+N ++DL AR GN+ A + +P + D W L+ GC
Sbjct: 454 NNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 109/256 (42%), Gaps = 59/256 (23%)
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
+ LGN++ A+EL ++ PK D+ ++ +
Sbjct: 78 FCELGNLRRAMELINQSPKPDL-------------------------------ELRTY-- 104
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SVL++C+ L S++ G+++H+ E + + + L+ MY+ CG++ +G +F +
Sbjct: 105 CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVAN 164
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE--------------ITFLGVLS 531
V W ++ G + G +E+++ F+ M + ++ E I++ ++S
Sbjct: 165 EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMIS 224
Query: 532 ACRHAGLVEEAWTIF---------TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
GL E+ +F T + +E L + C++D+ ++G + A Q+
Sbjct: 225 GYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNN--CLLDMYSKSGNLNSAIQVF 282
Query: 583 AEMPFKPDKTIWASML 598
M + W SM+
Sbjct: 283 ETMGER-SVVSWTSMI 297
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 209/769 (27%), Positives = 347/769 (45%), Gaps = 128/769 (16%)
Query: 9 ALRH-CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
AL H C + + QG+ +H I++ G+ F G LL+MY S +A +F + K
Sbjct: 45 ALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDK 104
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++V+WT+++ + P A L+ M G V PN Y AVL AC ++D R
Sbjct: 105 SVVAWTSLIGVNARSGHPKEAFHLFREMQLQG-VMPNDVTYVAVLGACGHPWEVDTIRAR 163
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLS-- 183
E LE D ++ +++ Y KCG L +FD + A+WN+M+S
Sbjct: 164 VEACG--SLELDVIVATAVMNAYGKCGDLDSAWGVFD------GILVRDAAVWNAMISLL 215
Query: 184 ------------------GGK------------------------QVHAFCVKRGFEKED 201
GG ++HAF + + +
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---------CFEC------- 245
V T+L++MY K G++DD +F + ERDVVSW ++ F+C
Sbjct: 276 VVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLV 335
Query: 246 --------------SCF------------TL----------------SALVDMYSNCNVL 263
+CF TL +A+++MYS C
Sbjct: 336 GELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSP 395
Query: 264 CEARK---LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
A L +Q + + +WN+++S YV NEQ EEA T+ + G+ ID+
Sbjct: 396 KSAFSSSLLLEQDRDQPS-----IMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
+ + AC + + +H L+ S V + L+ +YARLG+++ A E+F
Sbjct: 451 SLMTVFNACGSSASLEK--GKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFD 508
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ ++V++W+ ++ ++ GLN A +FR ++ N+ ++VL C LAS+
Sbjct: 509 AMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPA 568
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
K V A + GF L+ KCG +++ F+ M ++ VSW I Q
Sbjct: 569 AKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQ 628
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G + FQ M + +T +GVLS+C HAGLV + ++ F +M +YG E
Sbjct: 629 HGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAE 688
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASMLKACETHNNTKLVSIIAEQLL 618
HY C++DLL +AG + AE+ + +PF D+++ W ++L C+ H + + +++L
Sbjct: 689 HYSCVIDLLSRAGWLEHAEEFVKRLPFG-DQSVFPWITLLCGCKLHGDLERGGRATQRIL 747
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+P Y+++ N+YA G W + VRK+ +LG KK G+SWIEV
Sbjct: 748 GLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEV 796
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D+ TF + + C L + ++HGLI+ +G E+ +G+ L+ +Y + G+ + A
Sbjct: 39 DASTFAALIHKCARLHDLAQ--GRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARA 96
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F + K VVAW+ LI + G A+ LFR+M N +VL C
Sbjct: 97 VFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWE 156
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
+ + C E + I T++++ Y KCG++D +F + RD W +I
Sbjct: 157 VDTIRARVEAC--GSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISL 214
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
+ + EA+ F++M + PN+ T + L+AC H+ EA I + E +
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFAR-ELAGDA 273
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+V++ G+ G DDAE++ + + D W +ML A
Sbjct: 274 DTVVQTALVNMYGKFGKVDDAEEIFERIQER-DVVSWNAMLTA 315
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
L R P+ D V++S +H + L Y F D + D + F ++++ C+ L
Sbjct: 6 LGRRKPRIDPVSFS---TSAPQHRTDELKY--FDD---GSADASTF--AALIHKCARLHD 55
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +G+++H ++ G E D L+ MY KCG ++ A+F+ + ++ VV+WT +I
Sbjct: 56 LAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGV 115
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
++G KEA F+EM + PN++T++ VL AC H V+ TI ++ LE
Sbjct: 116 NARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD---TIRARVEACGSLEL 172
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+ +++ G+ G D A + + + D +W +M+ H
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVR-DAAVWNAMISLLVAHEQ 220
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ CG S+++GK +H + + L++ N L++MYA SL DA ++
Sbjct: 447 IDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREI 506
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +N++SWT MV ++ A+R++ +L G V PN ++AVL AC
Sbjct: 507 FDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEG-VAPNEVTFTAVLNACGNLAS 565
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNVALWN 179
+ +L+ ++ + + N LL KCGSL ++ +N + A N WN
Sbjct: 566 IPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSL-----EEVANFFQVMAVKNQVSWN 620
Query: 180 SMLSGGKQVHAFCVK----------RGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
+ ++ Q H V+ G + VTL ++ G + G + F
Sbjct: 621 TAIAANAQ-HGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYF 674
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 266/519 (51%), Gaps = 68/519 (13%)
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIV---------GCFEC------------SCF 248
MY+KCGE+D +F M +R+VVSWT ++V GC + +
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 249 TLSA-----------------------------------LVDMYSNCNVLCEARKLFDQY 273
TLSA LV +YS + +AR++FD
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFD-- 118
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI--HSSGMCIDSYTFTSALKACIN 331
A +A WN+M+SGY +A+ + + H D +TF S LKAC
Sbjct: 119 ---GAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSG 175
Query: 332 LLNFNSRFALQVHGLIVTSGYEL--DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L +R QVH + SG+ + I+ L+D+Y + + A+++F RL +K+V+
Sbjct: 176 L--GATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQ 233
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +++G + G + A LFR S + ++SSV+ V + A + +G+QVH + +
Sbjct: 234 WTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGI 293
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
K + S++DMYLKCG D+ +F+ M +VVSWT ++ G G++G +EA+A
Sbjct: 294 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVA 353
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+EM ++P+E+T+L +LSAC HAGLV+E F+ ++ + + P EHY CMVDLL
Sbjct: 354 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 413
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A LI MP +P +W ++L AC H + + + LLA ++P YV
Sbjct: 414 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYV 473
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
LSNV A G W KVR A ++ G +K+ G SW+EV
Sbjct: 474 TLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVG 512
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 189/505 (37%), Gaps = 113/505 (22%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY L+ A ++F M +N+VSWT ++ + + +RL M PN +
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY 164
SA LKAC + GD G IH R + V+ ++L+ +Y K G + R++FD
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFD-- 118
Query: 165 SNWAASAYGNVALWNSMLSG---------------------------------------- 184
A +A WN+M+SG
Sbjct: 119 ---GAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSG 175
Query: 185 ------GKQVHAFCVKRGFEKED--VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G QVHA GF + +L+DMY+KC + + +F + ++V+ WT
Sbjct: 176 LGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWT 235
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
++VG +
Sbjct: 236 AVVVG----------------------------------------------------HAQ 243
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
Q EA+ L SG DS+ +S + + + +G+ +G D
Sbjct: 244 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG--TDV 301
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
G++++D+Y + G A +F + +VV+W+ ++ G KHGL A LF +M
Sbjct: 302 SAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 361
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG--FEKEDITLTSLIDMYLKCGEID 474
+ ++ ++L CS A L + + C++R + ++D+ + GE+
Sbjct: 362 GVEPDEVTYLALLSACS-HAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420
Query: 475 DGLALFKFMP-ERDVVSWTGIIVGC 498
+ L + MP E V W ++ C
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSAC 445
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++QG+ +HC IK D+ GN+++ MY ++A ++F EM N+VSWTTMV
Sbjct: 282 VEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNG 341
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR-----LIHERITR 133
+ A+ L+ M G VEP+ Y A+L ACS +G +D R + +R R
Sbjct: 342 LGKHGLGREAVALFEEM-RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVR 400
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV 193
K E+ ++D+ + G L R+ D V +W ++LS + VH V
Sbjct: 401 PKAEH----YACMVDLLGRAGEL-REARDLIRTMPMEP--TVGVWQTLLSACR-VHKD-V 451
Query: 194 KRGFEKEDVTLT 205
G E DV L
Sbjct: 452 AVGREAGDVLLA 463
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 31/294 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLS--QDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
L+ C + ++G +H + G S + L+ MY L A ++F+ + RK
Sbjct: 170 LKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERK 229
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
N++ WT +V + + A+ L+ G+ P+ + S+V+ + ++ GR +
Sbjct: 230 NVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA-RPDSHVLSSVVGVLADFALVEQGRQV 288
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H ++ D N+++DMY+KCG L + + A NV W +M++G
Sbjct: 289 HCYGIKDPTGTDVSAGNSIVDMYLKCG-LPDEAERMFREMRAP---NVVSWTTMVNGLGK 344
Query: 185 ---GKQVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
G++ A + G E ++VT +L+ G +D+ F+ + V
Sbjct: 345 HGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAE 404
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
C +VD+ L EAR L V +W +++S
Sbjct: 405 HYAC----------MVDLLGRAGELREARDLIRTMPMEP-----TVGVWQTLLS 443
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 287/554 (51%), Gaps = 36/554 (6%)
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSM 181
G ++H + + + N L+ Y K + L FD+ ++ WNS+
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ------RDIISWNSI 56
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--RDVVSWTGII 239
+ G C G + V L + M+L+ E+D L + MP + S+ G +
Sbjct: 57 IGG-------CASNGLYDKAVEL--FVRMWLEGQELDS-TTLLSVMPACVQSHYSFIGGV 106
Query: 240 VGCFECSCFTLS------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
V + +S AL+DMYSNC+ K+F NV W +MI+
Sbjct: 107 VHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQ------KNVVSWTAMITS 160
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y ++ L + G+ D + TSAL A N + + VHG + +G E
Sbjct: 161 YTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAG--NESLKHGKSVHGYAIRNGIE 218
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
V + L+++Y + G ++ A +F + KKD ++W+ LI G ++ L + A+ LF +M
Sbjct: 219 EVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM 278
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + N ++ +L + L+SL RG+++HA+ V+RG+ +++ +L+DMY+KCG +
Sbjct: 279 LLQLRP-NAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGAL 337
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
LF + ++++SWT +I G G +GR ++AIA F++M S ++P+ +F +L AC
Sbjct: 338 LLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYAC 397
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+GL +E W F +M+ E+ +EP L+HY CMVDLL G +A + I MP +PD +I
Sbjct: 398 SHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSI 457
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGK 652
W S+L+ C H N KL +AE + PE+ YV+L+N+YA W+++ K++ K G
Sbjct: 458 WVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGG 517
Query: 653 KLGEKKAGMSWIEV 666
+ + G SWIEV
Sbjct: 518 RGLRENTGCSWIEV 531
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 192/480 (40%), Gaps = 115/480 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G +H ++KYG N L+S YA + DA +FDEM +++I+SW +++ S
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + A+ L+ M G E + +V+ AC S +G ++H R L +T
Sbjct: 63 NGLYDKAVELFVRMWLEGQ-ELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYGNVALW-------------- 178
L N LLDMY C T K+F +W A ++Y +
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 179 -----------------NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
N L GK VH + ++ G E+ +L++MY+KCG +++
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 222 ALFNFMPERDVVSWTGIIVG-----------------------------CFECSCFTLS- 251
+F+ + ++D +SW +I G C + +LS
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSS 301
Query: 252 ------------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
ALVDMY C L AR+LFD ++ N+ W
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN------KNLISW 355
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
MI+GY ++ + +AI L + SG+ D+ +F++ L AC S L+ G
Sbjct: 356 TIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYAC-------SHSGLRDEGWR 408
Query: 348 VTSGYELDYIVGSNL------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ ++ + L +DL GN+K A E +P + D W L+ GC H
Sbjct: 409 FFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ I AL S+K GKS+H I+ G+ + + N L+ MY + +A +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + +K+ +SW T++ Y+ + N A L+N ML + PN + +L A + L
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL--QLRPNAVTMACILPAAASLSSL 302
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWN 179
+ GR +H R D + N L+DMYVKCG+ L R+LFD +N N+ W
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN------KNLISWT 356
Query: 180 SMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
M++G G+ A + G + + + ++++ G D+G FN M
Sbjct: 357 IMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAM 413
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/764 (26%), Positives = 347/764 (45%), Gaps = 111/764 (14%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L +V A H G + G ++H + GL +++ G LL +Y + +A +LF
Sbjct: 44 LASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM ++N+VSWT ++ A +SN A+ Y M + G V N + V+ C D
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG-VMCNANALATVVSLCGALEDEV 162
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-----KLFDQYS-----NWAA--S 170
G + + L + N+L+ M+ G+L R +LFD+ +W A S
Sbjct: 163 AGLQVTAHVVVSGLLTHVSVANSLITMF---GNLRRVQDAERLFDRMEERDRISWNAMIS 219
Query: 171 AYGNVALW-------------------------------NSMLSGGKQVHAFCVKRGFEK 199
Y + ++ + +++ G +H+ CV G
Sbjct: 220 MYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHC 279
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------GCFEC-------- 245
+ +L++MY G++D+ +LF M RDV+SW +I C E
Sbjct: 280 SVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLL 339
Query: 246 -----------------SCFTLSALVD-------------------------MYSNCNVL 263
+C + AL++ MYS CN +
Sbjct: 340 QTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSM 399
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ ++F+ + +V N + GY E A+ + S + +G+ + T
Sbjct: 400 EDTERVFESMPCY------DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMI 453
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ C +L + +S + + +H + +G D + ++LI +YA G+++S+ +F R+
Sbjct: 454 NLQGTCKSLGDLHS-YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRIN 512
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
K V++W+ +I +HG A LF D ++ +++F ++ L + LASL G Q
Sbjct: 513 NKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ 572
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H VK G + + + + +DMY KCG++D L R W +I G + G
Sbjct: 573 LHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGY 632
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
KEA F+ M+ KP+ +TF+ +LSAC HAGL+++ + SM P +G+ P ++H
Sbjct: 633 FKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCV 692
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
C+VDLLG+ G F +AE+ I EMP P+ IW S+L + TH N + A+ LL P
Sbjct: 693 CIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPF 752
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
D S YV+LSN+YAT W + K+R K + K+ SW+++
Sbjct: 753 DDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKL 796
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/529 (20%), Positives = 198/529 (37%), Gaps = 104/529 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + + C + G +H + GL + N L++MY+ L++A LF
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M+R++++SW TM+++Y + A+ +L+ PN +S+ L ACS L
Sbjct: 305 RNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEAL 364
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAY 172
GR IH I + L+ ++ N+LL MY KC S+ T ++F+ N Y
Sbjct: 365 MNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424
Query: 173 --------------------------------GNVALWNSMLSGGKQVHAFCVKRGFEKE 200
G + S G +HA+ + G +
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+ SLI MY CG+++ +F+ + + V+SW II
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAII--------------------- 523
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ V + + EEAI L +G +D +
Sbjct: 524 -------------------------------AANVRHGRGEEAIKLFMDSQHAGNKLDRF 552
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
L + NL + +Q+HGL V +G + D V + +D+Y + G + L+
Sbjct: 553 CLAECLSSSANLASLEE--GMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLP 610
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+ W+ LI G ++G A F+ M++ Q + ++L CS + +
Sbjct: 611 DPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDK 670
Query: 441 GKQVH-----AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
G + F V G + ++D+ + G+ + MP
Sbjct: 671 GMDYYNSMAPTFGVSPGIKH----CVCIVDLLGRLGKFAEAEKFIDEMP 715
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 197/490 (40%), Gaps = 43/490 (8%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---D 120
M + SW T V+ + A L M E V +GF ++++ AC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRER-DVPLSGFALASLVTACEHRGWQEG 59
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
G IH R L + + LL +Y GS L Q W NV W +
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLY---GSRGLVLNAQRLFWEMPQR-NVVSWTA 115
Query: 181 ML----SGGKQVHAFCVKRGFEKEDV--TLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
++ S G A R KE V +L + CG ++D +A
Sbjct: 116 IMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAH----- 170
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
++V ++L+ M+ N + +A +LFD+ + WN+MIS Y
Sbjct: 171 ---VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEE------RDRISWNAMISMY 221
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI--NLLNFNSRFALQVHGLIVTSGY 352
E + +LS + + D T S + C +L+ S +H L V+SG
Sbjct: 222 SHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS----GIHSLCVSSGL 277
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK-----HGLNSLAY 407
+ + L+++Y+ G + A LF + ++DV++W+ +I + L +L
Sbjct: 278 HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQ 337
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LL D N SS L CS +L G+ +HA ++R + + SL+ MY
Sbjct: 338 LLQTD----EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMY 393
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KC ++D +F+ MP DVVS + G A+ F M + +KPN IT +
Sbjct: 394 SKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMI 453
Query: 528 GVLSACRHAG 537
+ C+ G
Sbjct: 454 NLQGTCKSLG 463
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 3/341 (0%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHG 345
W + +SG A TLL + + + + S + AC + + +H
Sbjct: 9 WYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHA 68
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L +G + +G+ L+ LY G V +A LF +P+++VV+W+ +++ + +G
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEE 128
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A + +R M N +++V+ +C L G QV A V G SLI
Sbjct: 129 ALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLIT 188
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
M+ + D LF M ERD +SW +I + +M +KP+ T
Sbjct: 189 MFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++S C + LV I S+ GL + +V++ AG D+AE L M
Sbjct: 249 LCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
+ D W +M+ + N+ QLL T P+
Sbjct: 308 S-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/764 (26%), Positives = 347/764 (45%), Gaps = 111/764 (14%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L +V A H G + G ++H + GL +++ G LL +Y + +A +LF
Sbjct: 44 LASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM ++N+VSWT ++ A +SN A+ Y M + G V N + V+ C D
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG-VMCNANALATVVSLCGALEDEV 162
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-----KLFDQYS-----NWAA--S 170
G + + L + N+L+ M+ G+L R +LFD+ +W A S
Sbjct: 163 AGLQVTAHVVVSGLLTHVSVANSLITMF---GNLRRVQDAERLFDRMEERDRISWNAMIS 219
Query: 171 AYGNVALWNS-------------------------------MLSGGKQVHAFCVKRGFEK 199
Y + +++ +++ G +H+ CV G
Sbjct: 220 MYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHC 279
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV------GCFEC-------- 245
+ +L++MY G++D+ +LF M RDV+SW +I C E
Sbjct: 280 SVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLL 339
Query: 246 -----------------SCFTLSALVD-------------------------MYSNCNVL 263
+C + AL++ MYS CN +
Sbjct: 340 QTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSM 399
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ ++F+ + +V N + GY E A+ + S + +G+ + T
Sbjct: 400 EDTERVFESMPCY------DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMI 453
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ C +L + +S + + +H + +G D + ++LI +YA G+++S+ +F R+
Sbjct: 454 NLQGTCKSLGDLHS-YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRIN 512
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
K V++W+ +I +HG A LF D ++ +++F ++ L + LASL G Q
Sbjct: 513 NKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ 572
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H VK G + + + + +DMY KCG++D L R W +I G + G
Sbjct: 573 LHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGY 632
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
KEA F+ M+ KP+ +TF+ +LSAC HAGL+++ + SM P +G+ P ++H
Sbjct: 633 FKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCV 692
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
C+VDLLG+ G F +AE+ I EMP P+ IW S+L + TH N + A+ LL P
Sbjct: 693 CIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPF 752
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
D S YV+LSN+YAT W + K+R K + K+ SW+++
Sbjct: 753 DDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKL 796
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 197/490 (40%), Gaps = 43/490 (8%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG---D 120
M + SW T V+ + A L M E V +GF ++++ AC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRER-DVPLSGFALASLVTACEHRGWQEG 59
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
G IH R L + + LL +Y GS L Q W NV W +
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLY---GSRGLVLNAQRLFWEMPQR-NVVSWTA 115
Query: 181 ML----SGGKQVHAFCVKRGFEKEDV--TLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
++ S G A R KE V +L + CG ++D +A
Sbjct: 116 IMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAH----- 170
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
++V ++L+ M+ N + +A +LFD+ + WN+MIS Y
Sbjct: 171 ---VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEE------RDRISWNAMISMY 221
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI--NLLNFNSRFALQVHGLIVTSGY 352
E + +LS + + D T S + C +L+ S +H L V+SG
Sbjct: 222 SHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS----GIHSLCVSSGL 277
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK-----HGLNSLAY 407
+ + L+++Y+ G + A LF + ++DV++W+ +I + L +L
Sbjct: 278 HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQ 337
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LL D N SS L CS +L G+ +HA ++R + + SL+ MY
Sbjct: 338 LLQTD----EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMY 393
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KC ++D +F+ MP DVVS + G A+ F M + +KPN IT +
Sbjct: 394 SKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMI 453
Query: 528 GVLSACRHAG 537
+ C+ G
Sbjct: 454 NLQGTCKSLG 463
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 3/341 (0%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHG 345
W + +SG A TLL + + + + S + AC + + +H
Sbjct: 9 WYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHA 68
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
L +G + +G+ L+ LY G V +A LF +P+++VV+W+ +++ + +G
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEE 128
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A + +R M N +++V+ +C L G QV A V G SLI
Sbjct: 129 ALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLIT 188
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
M+ + D LF M ERD +SW +I + +M +KP+ T
Sbjct: 189 MFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
++S C + LV I S+ GL + +V++ AG D+AE L M
Sbjct: 249 LCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
+ D W +M+ + N+ QLL T P+
Sbjct: 308 S-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 199/678 (29%), Positives = 303/678 (44%), Gaps = 126/678 (18%)
Query: 103 PNGFMYSAVLKA---CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK 159
P + VL+A C+ L GR +H RI T + N+L+++Y KC ++
Sbjct: 5 PLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKA 64
Query: 160 --LFDQYSNWAASAYGNVALWNSMLSG--------------------------------- 184
+FD +N +V WN +++
Sbjct: 65 NLVFDSINN------KDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHT 118
Query: 185 ----------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
G+Q HA VK + +SL++MY K G + + LF+ MP
Sbjct: 119 LTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP 178
Query: 229 ERDVVSWTGIIVG---------CFEC-------------------------SCFTL---- 250
ER+ VSW +I G FE +C+ L
Sbjct: 179 ERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTG 238
Query: 251 -------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ALV MY C L +A K F+ S N W++M+
Sbjct: 239 RQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFE------LSGNKNSITWSAMV 292
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+G+ +++A+ L +H SG +T + AC + Q+HG + G
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVE--GRQMHGYSLKLG 350
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
YEL V S L+D+YA+ G++ A + F + + DVV W+ +I G ++G A L+
Sbjct: 351 YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYG 410
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M N ++SVLK CS LA+L +GKQ+HA +K F E ++L MY KCG
Sbjct: 411 KMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCG 470
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+DDG +F MP RDV+SW +I G QNGR E + F++M KP+ +TF+ +LS
Sbjct: 471 SLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLS 530
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GLV+ W F M E+ + P +EHY CMVD+L +AG +A++ I
Sbjct: 531 ACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGL 590
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+W +L A + H + L + E+L+ + S YV+LS++Y LG W+ + +VR
Sbjct: 591 CLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMM 650
Query: 652 KKLG-EKKAGMSWIEVSS 668
K G K+ G SWIE+ S
Sbjct: 651 KARGVTKEPGCSWIELKS 668
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 290/536 (54%), Gaps = 35/536 (6%)
Query: 144 NTLLDMYVKCGS--LTRKLFDQYS-----NWAASAYGNVALWNSMLSGGKQVHAFCVKRG 196
N L+DMY KC + K+FD +W A G+V N L+G + ++G
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHV--LNGDLNGSLSLFTEMGRQG 465
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ T ++ + ++ GL + F + +G FE ++LVDM
Sbjct: 466 IYPNEFTFSTNLKACGLLNALEKGLQIHGFC----------LKIG-FEMMVEVGNSLVDM 514
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
YS C + EA K+F W ++ WN+MI+GYV A+ + + +
Sbjct: 515 YSKCGRINEAEKVF----RWMVGR--SLISWNAMIAGYVHAGYGSRALATFGMMQEAKIK 568
Query: 317 --IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD---YIVGSNLIDLYARLGN 371
D +T TS LKAC + + Q+HG +V SG+ I GS L+DLY + GN
Sbjct: 569 ERPDEFTLTSLLKACSSTGMIYA--GKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGN 625
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA + F ++ +K +++WS LI+G + G A LF+ + + ++ F++SS++ V
Sbjct: 626 LFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGV 685
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
+ A L++GKQ+ A VK E SL+DMYLKCG +D+ F M +DV+SW
Sbjct: 686 FADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISW 745
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I G G++G K+A++ F +M++ ++P+E+ +L VLSAC H+G+++E +F+ +
Sbjct: 746 TVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 805
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
G++P +EHY C+VDLLG+AG +A+ L+ MP KP+ IW ++L C H + +L
Sbjct: 806 TQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGK 865
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ + LL ++P+ YVM+SN+Y G W+ R+ G G +K+AGMSW+E+
Sbjct: 866 EVGKILLRIDGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEI 921
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 235/590 (39%), Gaps = 136/590 (23%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G ++ T N L+ MY A+K+FD M +N+VSWT +++ + N N ++ L+
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M G + PN F +S LKAC L L+ G IH + E + N+L+DMY K
Sbjct: 459 TEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 153 CGSL--TRKLFD------------QYSNWAASAYGNVALW-------------------- 178
CG + K+F + + + YG+ AL
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 179 --------NSMLSGGKQVHAFCVKRGFE-KEDVTLT-SLIDMYLKCGEIDDGLALFNFMP 228
M+ GKQ+H F V+ GF T+T SL+D+Y+KCG + F+ +
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
E+ ++SW+ +I+G Y+ EA LF + ++
Sbjct: 638 EKTMISWSSLILG---------------YAQEGDFVEAMGLFKRLQELSSQ--------- 673
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
IDS+ +S + + +Q + +
Sbjct: 674 ----------------------------IDSFVLSSIIGVFADFALLQQGKQMQALVVKL 705
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
SG E V ++L+D+Y + G V A + F + KDV++W+ +I G KHGL A
Sbjct: 706 PSGLETS--VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVS 763
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMY 467
+F M+ N + ++ +VL CS ++ G+++ + ++ +G + ++D+
Sbjct: 764 IFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLL 823
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+ G + + L MP +KPN +
Sbjct: 824 GRAGRLKEAKHLVDTMP----------------------------------IKPNVGIWQ 849
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+LS CR G +E + + G P +Y M +L GQAG +++
Sbjct: 850 TLLSLCRVHGDIELGKEVGKILLRIDGKNP--ANYVMMSNLYGQAGYWNE 897
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
SG L+ I + LID+Y + A ++F +P+++VV+W+ L+ G +G + + L
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F +M N+F S+ LK C L +L +G Q+H FC+K GFE SL+DMY K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK--PNEITFL 527
CG I++ +F++M R ++SW +I G G A+A F M ++++K P+E T
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 528 GVLSACRHAGLV 539
+L AC G++
Sbjct: 578 SLLKACSSTGMI 589
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 43/275 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG ++++G +H +K G + GN+L+ MY+ +N+A K+F M +++
Sbjct: 477 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSL 536
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIH 128
+SW M+ Y + A+ + M E E P+ F +++LKACS +G + G+ IH
Sbjct: 537 ISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIH 596
Query: 129 ERITREKLEYDT--VLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYG------ 173
+ R + + +L+D+YVKCG+L RK FDQ +W++ G
Sbjct: 597 GFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGD 656
Query: 174 ---NVALWN------------------------SMLSGGKQVHAFCVKRGFEKEDVTLTS 206
+ L+ ++L GKQ+ A VK E S
Sbjct: 657 FVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+DMYLKCG +D+ F M +DV+SWT +I G
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
++QGK + ++K + N+L+ MY +++A K F EM K+++SWT M+T
Sbjct: 692 LQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-----RLIHERITR 133
Y + A+ ++N ML + ++EP+ Y AVL ACS SG + G +L+ + +
Sbjct: 752 YGKHGLGKKAVSIFNKMLRH-NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIK 810
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
++E+ ++D+ + G L + L D NV +W ++LS
Sbjct: 811 PRVEH----YACVVDLLGRAGRLKEAKHLVD-----TMPIKPNVGIWQTLLS 853
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 318/639 (49%), Gaps = 38/639 (5%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D ++ LLS A S+ A K+FD + + +I W ++T ++A L+ M
Sbjct: 111 DAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMN 170
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ G V+ + + ++ +L CSL D GR +H + + T ++N+L+ MY KCG +
Sbjct: 171 KMG-VKADKYTFATMLSLCSLE-LFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCV 228
Query: 157 TR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVH----AFCVKRGFEKE--DVTLTSLI 208
++F++ + Y + +N+M+ G V AF + R +K D T + +
Sbjct: 229 VDACEVFEEAEEGGSRDYVS---YNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFV 285
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+ C + G + + VGC + +A++ MYS + E +
Sbjct: 286 SVMSSCSSLRAGC-----QAQSQAIKMG--FVGCVAVN----NAMMTMYSGFGEVIEVQN 334
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F+ +V WN M+S ++ EEA+ + G+ D +T+ S L A
Sbjct: 335 IFEGMEER------DVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAA 388
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
+L + +H L+ SG + V + L+ Y R G +K A ++F +P K ++
Sbjct: 389 TDSL-----QVVEMIHSLLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLI 442
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
+W+ +I G +G F ++++ N + +S VL +CS ++++ GKQVH +
Sbjct: 443 SWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYI 502
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
++ GF E +L+ MY KCG +D L +F M ERD ++W II Q+GR +EA+
Sbjct: 503 LRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAV 562
Query: 509 AYFQEMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
F+ M S +KP++ TF VLSAC HAGLV++ IF +M YG P ++H+ C+VD
Sbjct: 563 CCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVD 622
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG++G D+AE++I F I S+ AC H N L +A +L +PS
Sbjct: 623 LLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNNPSV 682
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIE 665
YV+LSN+ A G W+ + +R+ ++ G K+ G SWI
Sbjct: 683 YVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWIR 721
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 173/454 (38%), Gaps = 120/454 (26%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S++ G + IK G + N +++MY+ F + + +F+ M +++VSW MV+
Sbjct: 293 SLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVS 352
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ A+ Y M G +EP+ F Y ++L A + L + +IH + + L
Sbjct: 353 MFLQENLEEEAMLSYLKMRREG-IEPDEFTYGSLLAA---TDSLQVVEMIHSLLCKSGLV 408
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------- 184
VL N L+ Y + G + R + ++ Y ++ WNS++SG
Sbjct: 409 KIEVL-NALVSAYCRHGKIKRA----FQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQ 463
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
GKQVH + ++ GF E +L+ MY K
Sbjct: 464 FSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAK 523
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
CG +D L +F+ M ERD ++W II
Sbjct: 524 CGSLDKALRVFDAMVERDTITWNAII---------------------------------- 549
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS-GMCIDSYTFTSALKAC--I 330
S Y + + EEA+ + +S G+ D TFTS L AC
Sbjct: 550 ------------------SAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHA 591
Query: 331 NLLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR--LPKK 385
L++ R ++V+G + + +D+ S ++DL R G + A +
Sbjct: 592 GLVDDGIRIFDTMVKVYGFVPS----VDHF--SCIVDLLGRSGYLDEAERVIKSGYFGAH 645
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ WS L C HG L + R ++ + +
Sbjct: 646 SNICWS-LFSACAAHGNLGLGRTVARLILERDHN 678
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 69/121 (57%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ GK +H I+++G S ++ GN L++MYA SL+ A ++FD M ++ ++W
Sbjct: 486 CSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITW 545
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++AY + R A+ + M ++P+ +++VL ACS +G +D G I + +
Sbjct: 546 NAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMV 605
Query: 133 R 133
+
Sbjct: 606 K 606
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 288/560 (51%), Gaps = 36/560 (6%)
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
DL + IH +I L ++T L N+L++ YV CG L D + + NV W
Sbjct: 36 DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA----DAKQIFHHTPCKNVVSWT 91
Query: 180 SMLSGGKQ----VHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
++SG + V A V R F+ VT++S++ + G I ++ F
Sbjct: 92 ILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF---- 147
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
W + G FE + F +ALVDMYS + AR+LF+ S NV WN++
Sbjct: 148 ----W---VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER------NVVSWNAI 194
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
+SGY + +EEAI L + + G+ +D YT S + A +++ + +HG I+ +
Sbjct: 195 VSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL--QVGTGIHGFIIRT 252
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
GYE D + + L+D+Y V A +F + KDV AW+ ++ G + A F
Sbjct: 253 GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHF 312
Query: 411 RDMIN-SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
M+ N ++ ++ +L CS +L++G++VHA +K F +++IDMY
Sbjct: 313 NKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG ++D F M E+DVV W +I G G NG +AI F +M S L P+E TF+ V
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L AC HAG+V E IF M P+L+HY C++D+LG+AG D A I MPF+P
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D +++++L AC H N KL I++++ P D YV+LSN+YA G W+ + R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 650 A--GKKLGEKKAGMSWIEVS 667
+ K+L +K G S IE++
Sbjct: 553 SLRSKRL-KKDPGFSSIEIN 571
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 201/493 (40%), Gaps = 127/493 (25%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+ +K + +H +II GL+ + F N+L++ Y L DA ++F KN+VSWT ++
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILI 94
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ N AI ++ M G+ +PN S+VL A + G + + + +H R
Sbjct: 95 SGLAKNDCFVEAIDVFREM-TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 137 EYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
E + + L+DMY K C + R+LF+ S NV WN+++SG
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSER------NVVSWNAIVSGYSDHGFSEEA 207
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
G +H F ++ G+E + T+L+D+
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWT---------------------------------- 236
Y+ +DD +F+ M +DV +WT
Sbjct: 268 YVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIV 327
Query: 237 --GIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
GI+ C F + F SA++DMY+NC L +A++ F
Sbjct: 328 LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF---- 383
Query: 275 SWAASAYG----NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
YG +V WN+MI+G +N +AI L + SG+ D TF S L AC
Sbjct: 384 ------YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACS 437
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVG-SNLIDLYARLGNVKSALELFHRLP-KKDVV 388
+ LQ+ +V + +++ + + +ID+ R G + +A + +P + D
Sbjct: 438 HAGMVYE--GLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495
Query: 389 AWSGLIMGCTKHG 401
+S L+ C HG
Sbjct: 496 VYSTLLGACRIHG 508
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
L L+ +Q+HA + G SL++ Y+ CG + D +F P ++VVSWT +
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G +N EAI F+EM KPN +T VL A + GL+ A ++ G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHC-FWVRGG 152
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
E ++ +VD+ + GC A QL M
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESM 183
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++QG+ +H IK + +IF G+ ++ MYA+ +L DA + F M K++
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
V W M+ N AI L+ M G ++P+ + +VL ACS +G
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSG-LDPDESTFVSVLYACSHAG 440
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 198/678 (29%), Positives = 330/678 (48%), Gaps = 57/678 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
+ HC ++ Q + + + +K G++Q I +L+ +Y + A +FD+M+ ++
Sbjct: 63 SFTHCPSTAAL-QARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRD 121
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++ Y+ N AI+L+ ML + +PN ++L +C + GR IH
Sbjct: 122 VVSWNVLICGYSQNGYLYHAIQLFVDMLR-ENFKPNQTTIVSLLPSCGCFELIFQGRSIH 180
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGNVALWN 179
+ D+ L N L+ MY KC L ++ LFD+ N YG L++
Sbjct: 181 GFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFD 240
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ K++ +K GF VT+ +L+ N PE
Sbjct: 241 KAILYFKEM----LKEGFHPSSVTIMNLVSA--------------NAFPEN--------- 273
Query: 240 VGCFECSC-FT-----LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
V C+ C FT +++LV +Y+ A++L+ Y + ++ ++IS
Sbjct: 274 VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPT------KDLITLTAIISS 327
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--QVHGLIVTSG 351
Y E A+ + D+ L N S FA+ HG V SG
Sbjct: 328 YSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITN----PSHFAIGCTFHGYGVKSG 383
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
D +V + LI LY+R +++AL LF+ + +K ++ W+ +I GC + G +S A LF
Sbjct: 384 LSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFS 443
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+M + + I+S+L C L +LR G+ +H++ ++ ED T+LIDMY KCG
Sbjct: 444 EMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCG 503
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+D +F + + + +W II G G A + ++ + LKP++ITFLGVL+
Sbjct: 504 RLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLA 563
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GLV F M EYGL P L+HY C+V LLG+ G F +A + I +M +PD
Sbjct: 564 ACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDS 623
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+W ++L AC KL +A++L + ++ YV++SN+YA +G WD +++VR+
Sbjct: 624 AVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMM 683
Query: 652 KKL-GEKKAGMSWIEVSS 668
K G+ +G+S I+V S
Sbjct: 684 KDSGGDGCSGVSVIDVIS 701
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 221/546 (40%), Gaps = 90/546 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L CG I QG+S+H IK G D N L+SMYA L + LFDEM
Sbjct: 160 IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMD 219
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++VSW TM+ Y N + AI + ML+ G P+ ++ A + +
Sbjct: 220 EKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEG-FHPSSVTIMNLVSANAFPEN----- 273
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + + D ++ +L+ +Y K G ++N A Y
Sbjct: 274 -VHCYVVKCGFTNDASVVTSLVCLYAKQG---------FTNTAKQLY------------- 310
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF----NFMPERDVVSWTGIIVG 241
K K+ +TLT++I Y + G+I+ + F + D V+ G++ G
Sbjct: 311 --------KYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHG 362
Query: 242 CFECSCFTLSALVDMY-------SNC---NVLCEARKLFDQYSSWAASAYG----NVALW 287
S F + Y ++C N L FD+ + + Y + W
Sbjct: 363 ITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITW 422
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
NSMISG V ++ +A+ L S + G D+ T S L C L N R +H I
Sbjct: 423 NSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNL--RIGETLHSYI 480
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + ++ +G+ LID+Y++ G + A ++F+ + + W+ +I G + +GL A+
Sbjct: 481 LRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAF 540
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
+ + ++ VL C+ H V G E +I
Sbjct: 541 GCYSKLQEQGLKPDKITFLGVLAACT-----------HGGLVYLGLEYFNIMTKE----- 584
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+ MP + + I+ G+ G KEAI + +M ++P+ +
Sbjct: 585 ------------YGLMPS--LQHYACIVALLGKEGLFKEAIEFINKM---EIQPDSAVWG 627
Query: 528 GVLSAC 533
+L+AC
Sbjct: 628 ALLNAC 633
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKV---------CSCLASLRRGKQVHAFCVKRGFE 454
S A ++FR ++ +N + N+F S ++K C A+L + +Q+ C+KRG
Sbjct: 30 SPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVN 88
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ TSLID+Y+K G +F M RDVVSW +I G QNG AI F +M
Sbjct: 89 QFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDM 148
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEH 561
++ KPN+ T + +L +C L+ + +I +K +GL+ HL +
Sbjct: 149 LRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN 196
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L C Q +++ G++LH I++ + + F G L+ MY+ L+ A K+F
Sbjct: 453 DAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVF 512
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + +W +++ Y+ + A Y+ + E G ++P+ + VL AC+ G +
Sbjct: 513 YNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQG-LKPDKITFLGVLAACTHGGLV 571
Query: 122 DLGRLIHERITRE 134
LG +T+E
Sbjct: 572 YLGLEYFNIMTKE 584
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 250/428 (58%), Gaps = 12/428 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F+ ++++DMYS C ++ EA ++F+ NV WN+MI+GY EE
Sbjct: 35 FDVIXVVGNSMIDMYSKCGMVGEAARVFNTL------PVRNVISWNAMIAGYTNERNGEE 88
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG--YELDYIVGS 360
A+ L + G D YT++S+LKAC +Q+H ++ G Y V
Sbjct: 89 ALNLFREMREKGEVPDGYTYSSSLKACSCADAAGE--GMQIHAALIRHGFPYLAQSAVAG 146
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+DLY + + A ++F R+ +K V++WS LI+G + A LFR++ S +
Sbjct: 147 ALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRM 206
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLAL 479
+ F++SS++ V + A L +GKQ+HA+ +K + ++++ S++DMY+KCG + AL
Sbjct: 207 DGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADAL 266
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ M ER+VVSWT +I G G++G +A+ F EM ++ ++P+ +T+L VLSAC H+GL+
Sbjct: 267 FREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLI 326
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+E F+ + ++P +EHY CMVDLLG+ G +A+ LI +MP KP+ IW ++L
Sbjct: 327 KEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLS 386
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKK 658
C H + ++ + E LL +P+ YVM+SN+YA G W K+R+ K+ G +K+
Sbjct: 387 VCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKE 446
Query: 659 AGMSWIEV 666
AG SW+E+
Sbjct: 447 AGRSWVEM 454
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 189/454 (41%), Gaps = 122/454 (26%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R + + L C +RR + QGK +H + K G GN+++ MY+ + +A ++F+
Sbjct: 5 RLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNT 64
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+ +N++SW M+ YT+ + A+ L+ M E G V P+G+ YS+ LKACS +
Sbjct: 65 LPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEV-PDGYTYSSSLKACSCADAAGE 123
Query: 124 GRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGN 174
G IH + R Y + + L+D+YVKC + RK+FD+ +W+ G
Sbjct: 124 GMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGY 183
Query: 175 VALWN---------------------------------SMLSGGKQVHAFCVKRGFEKED 201
N ++L GKQ+HA+ +K + +
Sbjct: 184 AQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLE 243
Query: 202 VTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
+++ S++DMY+KCG + ALF M ER+VVSWT +I G
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITG------------------- 284
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
YG + N +A+ L + + +G+ DS
Sbjct: 285 --------------------YGKHGIGN-------------KAVELFNEMQENGIEPDSV 311
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LIDLYAR 368
T+ + L AC H ++ G + I+ SN ++DL R
Sbjct: 312 TYLAVLSAC-------------SHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGR 358
Query: 369 LGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
G +K A L ++P K +V W L+ C HG
Sbjct: 359 GGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHG 392
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 150/296 (50%), Gaps = 7/296 (2%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QVHG++ G+++ +VG+++ID+Y++ G V A +F+ LP ++V++W+ +I G T
Sbjct: 25 QVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNER 84
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE--KEDIT 459
A LFR+M + + + SS LK CSC + G Q+HA ++ GF +
Sbjct: 85 NGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAV 144
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+L+D+Y+KC + + +F + E+ V+SW+ +I+G Q KEA+ F+E+ +SR
Sbjct: 145 AGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRH 204
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ + ++ L+E+ + ++K YGL + ++D+ + G +A
Sbjct: 205 RMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LEMSVANSVLDMYMKCGLTVEA 263
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHN-NTKLVSIIAE-QLLATSPEDPSKYVMLS 632
+ L EM + + W M+ H K V + E Q P+ + +LS
Sbjct: 264 DALFREM-LERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLS 318
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+++ +L CS L +GKQVH K GF+ + S+IDMY KCG + + +F +
Sbjct: 6 LLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL 65
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
P R+V+SW +I G +EA+ F+EM + P+ T+ L AC A E
Sbjct: 66 PVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGM 125
Query: 544 TIFTSM 549
I ++
Sbjct: 126 QIHAAL 131
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 312/620 (50%), Gaps = 60/620 (9%)
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M +N VS+ M++ Y N + + A L++ M + F ++ +L + +
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM-----PHKDLFSWNLMLTGYARNR 109
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
L R++ + + E D V N +L YV+ G + R +FD+ + N
Sbjct: 110 RLRDARMLFDSMP----EKDVVSWNAMLSGYVRSGHVDEARDVFDRM------PHKNSIS 159
Query: 178 WNSMLSG----GKQVHAFCVKRGFE-KEDVTLTS---LIDMYLKCGEIDDGLALFNFMPE 229
WN +L+ G+ A +R FE K D L S L+ Y+K + D LF+ +P
Sbjct: 160 WNGLLAAYVRSGRLEEA---RRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPV 216
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RD++SW +I G Y+ L +AR+LF++ S +V W +
Sbjct: 217 RDLISWNTMISG---------------YAQDGDLSQARRLFEE------SPVRDVFTWTA 255
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
M+ YV + +EA + + SY A A ++ ++ +
Sbjct: 256 MVYAYVQDGMLDEARRVFDEMPQKREM--SYNVMIAGYAQYKRMDMGRELFEEMPFPNIG 313
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
S + +I Y + G++ A LF +P++D V+W+ +I G ++GL A +
Sbjct: 314 SW--------NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNM 365
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+M + +N+ L C+ +A+L GKQVH V+ G+EK + +L+ MY K
Sbjct: 366 LVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCK 425
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG ID+ +F+ + +D+VSW ++ G ++G ++A+ F+ MI + +KP+EIT +GV
Sbjct: 426 CGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGV 485
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC H GL + F SM +YG+ P+ +HY CM+DLLG+AGC ++A+ LI MPF+P
Sbjct: 486 LSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEP 545
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
D W ++L A H N +L AE + P + YV+LSN+YA G W +SK+R
Sbjct: 546 DAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRL 605
Query: 650 AGKKLG-EKKAGMSWIEVSS 668
+++G +K G SW+EV +
Sbjct: 606 KMRQIGVQKTPGYSWVEVQN 625
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 228/485 (47%), Gaps = 48/485 (9%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+F+ N +L+ YA L DA LFD M K++VSW M++ Y + + A +++ M
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
S+ NG +L A SG L+ R R+ K +++ + N L+ YVK
Sbjct: 153 PHKNSISWNG-----LLAAYVRSGRLEEAR----RLFESKSDWELISCNCLMGGYVKRNM 203
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC-VKRGFEKEDV----TLTSLI 208
L R+LFDQ ++ WN+M+SG Q +R FE+ V T T+++
Sbjct: 204 LGDARQLFDQI------PVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMV 257
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFECSCF----TLSA 252
Y++ G +D+ +F+ MP++ +S+ +I G FE F + +
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNI 317
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
++ Y L +AR LFD + + W ++I+GY N EEA+ +L +
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVS------WAAIIAGYAQNGLYEEAMNMLVEMKR 371
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G ++ TF AL AC ++ QVHG +V +GYE +VG+ L+ +Y + G +
Sbjct: 372 DGESLNRSTFCCALSACADIAALE--LGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCI 429
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A ++F + KD+V+W+ ++ G +HG A +F MI + ++ + VL C
Sbjct: 430 DEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSAC 489
Query: 433 SCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
S RG + H+ G +ID+ + G +++ L + MP E D +
Sbjct: 490 SHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAAT 549
Query: 491 WTGII 495
W ++
Sbjct: 550 WGALL 554
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 152/394 (38%), Gaps = 92/394 (23%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ + +D+FT ++ Y L++A ++FDEM +K +S+ M+ Y KR +
Sbjct: 240 RLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDM 299
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT-REKLEYDTVL---- 142
L+ M PN ++ ++ +GDL R + + + R+ + + ++
Sbjct: 300 GRELFEEM-----PFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYA 354
Query: 143 --------MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
MN L++M SL R F A SA ++A L GKQVH V+
Sbjct: 355 QNGLYEEAMNMLVEMKRDGESLNRSTF----CCALSACADIA----ALELGKQVHGQVVR 406
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G+EK + +L+ MY KCG ID+ +F + +D+VSW ++ G
Sbjct: 407 TGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAG------------- 453
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+A +G +A+T+ + ++G
Sbjct: 454 ---------------------YARHGFG------------------RQALTVFESMITAG 474
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYAR 368
+ D T L AC S L G DY + N +IDL R
Sbjct: 475 VKPDEITMVGVLSAC-------SHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527
Query: 369 LGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
G ++ A L +P + D W L+ HG
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHG 561
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK +H ++++ G + GN L+ MY +++A+ +F + K+
Sbjct: 384 ALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKD 443
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
IVSW TM+ Y + A+ ++ M+ G V+P+ VL ACS +G D G
Sbjct: 444 IVSWNTMLAGYARHGFGRQALTVFESMITAG-VKPDEITMVGVLSACSHTGLTDRG 498
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I + R G+ AL +F +P ++ V+++ +I G ++ SLA RD+ + +
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLA----RDLFDKMPHKDL 95
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F + +L + LR + + EK+ ++ +++ Y++ G +D+ +F
Sbjct: 96 FSWNLMLTGYARNRRLRDARML----FDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDR 151
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MP ++ +SW G++ ++GR +EA + + +S+ I+ ++ ++ +A
Sbjct: 152 MPHKNSISWNGLLAAYVRSGRLEEA----RRLFESKSDWELISCNCLMGGYVKRNMLGDA 207
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+F + L + M+ Q G A +L E P + D W +M+ A
Sbjct: 208 RQLFDQIPVR-----DLISWNTMISGYAQDGDLSQARRLFEESPVR-DVFTWTAMVYA 259
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/657 (27%), Positives = 325/657 (49%), Gaps = 48/657 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR C ++ + + LH ++ G + L+ YA A + D M +N
Sbjct: 49 LRSC---PTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRN 105
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+W + + + A+ Y M+ GSV +GF Y V+KAC+ G ++ GR++
Sbjct: 106 SFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVR 165
Query: 129 ERI----TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
E + R + + L+DM+ KCG L R +F+ ++A W +M+
Sbjct: 166 ENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLER------DLAAWTAMI 219
Query: 183 SGGKQVHA---------FCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
G VHA F R GF + V + ++I + E+ G+ L
Sbjct: 220 GGA--VHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHG------ 271
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ G + +C + +ALVDMY C L A ++F W+ + +V W+++I
Sbjct: 272 ----CAVRCGVGDDTCVS-NALVDMYCKCGCLGMADRVF-----WSI-GFKDVVSWSTLI 320
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+GY N ++ ++ L + + ++G+ +S T S L + + F R ++HG + +G
Sbjct: 321 AGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLF--RHGKEIHGFSLRNG 378
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
++ +GS ID Y+R G+++ A + +PK+D+V W+ ++ G +G A FR
Sbjct: 379 FDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFR 438
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+ + + SVL VC+ + L +GK++HA+ V+ +LIDMY KC
Sbjct: 439 ALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCC 498
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
++ G +F+ + +RD ++ +I G++G EAI F M + + P+++TF+ +LS
Sbjct: 499 CLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLS 558
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
+C HAGL+E+ + M +Y + P EHY C+VDL ++G DDA + ++ + + +
Sbjct: 559 SCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEI 618
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
+ +L AC HN + ++A+++ +P DP +++LSN+YA GMW ++++R
Sbjct: 619 DVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRIR 675
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 184/433 (42%), Gaps = 55/433 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + CG+ + ++ G LH ++ G+ D N L+ MY L A ++F +
Sbjct: 250 IATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIG 309
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++VSW+T++ Y+ N + + ++ L+ M+ G ++PN +++L + S G+
Sbjct: 310 FKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAG-LKPNSNTMASILPSLSEMKLFRHGK 368
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR-----KLFDQYSNWAASAYGNVALWNS 180
IH R + L + +D Y + GS+ +L + ++ +WNS
Sbjct: 369 EIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKR---------DLVIWNS 419
Query: 181 MLSG----GKQVHAFCVKR-----GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
M++G G A C R GF + VT+ S++ + + G L ++
Sbjct: 420 MVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHY 479
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ S C +AL+DMY C L + +++F + + A +N++I
Sbjct: 480 MSS-----------VCSVSNALIDMYCKCCCLEKGKEIFQLVTDR------DTATYNTLI 522
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S + + +EAI L + G+ D TF + L +C S L GL
Sbjct: 523 SSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSC-------SHAGLIEKGLHFYDI 575
Query: 352 YELDYIVG------SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG-CTKHGLNS 404
DY + S ++DLY+R G + A + L + + G ++G C H
Sbjct: 576 MLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMD 635
Query: 405 LAYLLFRDMINSN 417
+A L+ + + N
Sbjct: 636 IAELVAKRIFEQN 648
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 266/519 (51%), Gaps = 57/519 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L GK +H GF++ + L++ LI MY+KCG+ D +F+ M R++ SW ++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y +L AR +FD +V WN+M+ GY +
Sbjct: 122 G---------------YVKSGMLVRARVVFDSMPE------RDVVSWNTMVIGYAQDGNL 160
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ SG+ + ++F L AC+ + Q HG ++ +G+ + ++
Sbjct: 161 HEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL--QLNRQAHGQVLVAGFLSNVVLSC 218
Query: 361 NLIDLYAR-------------------------------LGNVKSALELFHRLPKKDVVA 389
++ID YA+ LG++++A +LF +P+K+ V+
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G + G + A LFR MI QF SS L + +ASLR GK++H + +
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAI 508
+ I ++SLIDMY K G ++ +F+ ++ D V W +I Q+G +A+
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+MI+ R++PN T + +L+AC H+GLVEE F SM ++G+ P EHY C++DL
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF + + I EMPF+PDK IW ++L C H N +L A++L+ PE + Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++LS++YA G W+ + K+R KK K+ +SWIE+
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEI 557
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 216/544 (39%), Gaps = 124/544 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG +S+KQGK +H + G + + N+L+ MY DA K+FD+M +N
Sbjct: 53 LQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRN 112
Query: 69 IVSWTTMVTAYTS-----------NKRPNWAIRLYNHML-------------------EY 98
+ SW MV+ Y + P + +N M+
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
++ N F ++ +L AC S L L R H ++ + VL +++D Y KCG +
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++ FD+ + ++ +W +++SG Y K G+
Sbjct: 233 AKRCFDEMT------VKDIHIWTTLISG--------------------------YAKLGD 260
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
++ LF MPE++ VSWT +I G
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAG----------------------------------- 285
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
YV A+ L + + G+ + +TF+S L A ++ +
Sbjct: 286 -----------------YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL- 327
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLI 394
R ++HG ++ + + IV S+LID+Y++ G+++++ +F R+ K D V W+ +I
Sbjct: 328 -RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMI 385
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGF 453
+HGL A + DMI N+ + +L CS + G + + V+ G
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ LID+ + G + + + MP E D W I+ C +G +
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 513 EMIQ 516
E+I+
Sbjct: 506 ELIK 509
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I++A CGQ S K R +DI L+S YA + A KLF EM
Sbjct: 220 IIDAYAKCGQMESAK-------RCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN VSWT ++ Y N A+ L+ M+ G V+P F +S+ L A + L G+
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQFTFSSCLCASASIASLRHGK 331
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF----DQYSNWAASAYGNVALWN 179
IH + R + + +++++L+DMY K GSL + ++F D++ + WN
Sbjct: 332 EIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH---------DCVFWN 382
Query: 180 SMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+M+S G K + +K + TL +++ G +++GL F M
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 47/253 (18%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGL----- 477
+++S+L+ C SL++GK +H GF++ + L++ LI MY+KCG+ D
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 478 --------------------------ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+F MPERDVVSW +++G Q+G EA+ ++
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 512 QEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAW-TIFTSMKPEYGLEPHLEHYYCMVD 567
+E +S +K NE +F G+L+AC R L +A + + G ++ ++D
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA-----GFLSNVVLSCSIID 222
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPS 626
+ G + A++ EM K D IW +++ + + AE+L PE +P
Sbjct: 223 AYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPV 277
Query: 627 KYVMLSNVYATLG 639
+ L Y G
Sbjct: 278 SWTALIAGYVRQG 290
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 194/717 (27%), Positives = 335/717 (46%), Gaps = 120/717 (16%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ AL +C R++ Q + +H + +G+ ++I N L+ Y+ + +L+DA+ LFD M
Sbjct: 85 ISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 141
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++ VSW+ MV + + ++ G+ P+ + V++AC +L +
Sbjct: 142 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGA-RPDNYTLPFVIRACRDLKNLQMA-- 198
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
L+DMYVKC + R LFD+
Sbjct: 199 -------------------LVDMYVKCREIEDARFLFDKMQ------------------- 220
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSWTGIIV 240
E++ VT T +I Y +CG+ ++ L LF M E D V+ ++
Sbjct: 221 -------------ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 267
Query: 241 GCFECSCFTLSALVDMY--------------------SNCNVLCEARKLFDQYSSWAASA 280
C + + ++D Y + C + AR++FD+
Sbjct: 268 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE----- 322
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
NV W++MI+ Y + Q +A+ L + SSGM D T S L ACIN N
Sbjct: 323 -KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ--V 379
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
QVH G + IV + L+ Y+ + A LF + +D V+WS ++ G K
Sbjct: 380 RQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 439
Query: 401 GLNSLAYLLFRDMI---------------NSNQDV-------------NQFIISSVLKVC 432
G + FR++I N+N+ + ++ + +V+ C
Sbjct: 440 GDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 499
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ L ++ + + + + ++ F+ + I T++IDM+ KCG ++ +F M E++V+SW+
Sbjct: 500 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWS 559
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G +G+ ++A+ F M++S + PN+IT + +L AC HAGLVEE F+ M +
Sbjct: 560 AMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED 619
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
Y + ++HY C+VDLLG+AG D+A +LI M + D+ +W + L AC TH + L
Sbjct: 620 YSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEK 679
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
A LL P++P Y++LSN+YA G W+ ++K R ++ +K G +WIEV +
Sbjct: 680 AATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDN 736
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 155/329 (47%), Gaps = 32/329 (9%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ SAL C NL QVH G + +V + LI Y+ + A LF
Sbjct: 84 YISALVNCRNLTQVR-----QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDG 138
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +D V+WS ++ G K G + FR++I + + + V++ C L +L+
Sbjct: 139 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ-- 196
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+L+DMY+KC EI+D LF M ERD+V+WT +I G +
Sbjct: 197 -------------------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLE 560
G+A E++ F++M + + P+++ + V+ AC G + +A I + + ++ L+ L
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
M+D+ + GC + A ++ M K + W++M+ A H + + +L +
Sbjct: 298 --TAMIDMYAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQGRKALDLFRMML-S 353
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
S P K + S +YA + +L++VR+
Sbjct: 354 SGMLPDKITLASLLYACINC-RNLTQVRQ 381
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 206/682 (30%), Positives = 330/682 (48%), Gaps = 94/682 (13%)
Query: 25 LHCR-------IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
L+CR I+K D+ N ++S Y + +L A LFDEM +N VSW+ +++
Sbjct: 67 LNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALIS 126
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+++YG VE + + + +S + + + E L+
Sbjct: 127 G----------------LMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
L LL+ V+ +T F A G+ L S+L VK GF
Sbjct: 171 ----LFFRLLESGVRPNDVT---FTSVVR-ACGELGDFGLGMSIL-------GLVVKAGF 215
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E SLI + L+ GEID +F+ M +RDVVSWT A++D Y
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWT---------------AILDAY 260
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L EAR++FD+ N W++MI+ Y + EEA+ L S + G
Sbjct: 261 VETGDLREARRIFDEMPER------NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKP 314
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ F L A +L ++ + +HG + G + D +GS+LIDLY + G
Sbjct: 315 NISCFACTLSALASLRALSA--GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSL---------------------AYL-------- 408
+F + +K+VV W+ ++ G + +G YL
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKV 432
Query: 409 --LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+F ++ S Q N+ SSVL C+ +ASL +G VH +K G + + T+L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEIT 525
Y KCG+I +F+ MPE++ +SWT +I G ++G A E++ F+EM + S + PNE+
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L VL AC H GLV++ F SM+ YG++P +HY C+VDLL ++G +AE+ I +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF+P+ WA++L C+ + + K+ A++L + + + YV+LSN+YA+ G W +S
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 646 KVRKAGKKLGEKKA-GMSWIEV 666
+RK ++ G KK+ G SW+EV
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEV 694
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 187/468 (39%), Gaps = 92/468 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG+ G S+ ++K G + N+L+++ ++ A ++FD M ++++
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE-------------------------PN 104
VSWT ++ AY A R+++ M E +
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 105 GFMYSAVLKACSLSG-----DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-- 157
GF + AC+LS L G IH +T+ ++ D + ++L+D+Y KCG
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF-EKEDVTLTSLIDMYL 212
R +FD NV WNSM+ G G+ + EK DV+ ++I YL
Sbjct: 371 RLVFDLILE------KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYL 424
Query: 213 KCGEIDDGLALFNFM------PERDVVSWTGIIVGC--------------------FECS 246
+ + + L +FN + P + +++ ++ C +
Sbjct: 425 ENEQCEKVLEVFNTLLVSGQTPNKS--TFSSVLCACASIASLDKGMNVHGKIIKLGIQYD 482
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +AL DMY+ C + ++++F++ N W MI G + E++ L
Sbjct: 483 IFVGTALTDMYAKCGDIGSSKQVFERMPE------KNEISWTVMIQGLAESGFAVESLIL 536
Query: 307 LSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN---- 361
+ +S + + S L AC S L GL + E Y +
Sbjct: 537 FEEMERTSEVAPNELMLLSVLFAC-------SHCGLVDKGLWYFNSMEKVYGIKPKGKHY 589
Query: 362 --LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
++DL +R G + A E +P + + AW+ L+ GC K+ +A
Sbjct: 590 TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIA 637
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 73/358 (20%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R++ G ++H + K G+ +D+F G++L+ +Y +D +FD + KN+V W +MV
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 77 TAYTSNKRP----------------NWA---------------IRLYNHMLEYGSVEPNG 105
Y+ N R +W + ++N +L G PN
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT-PNK 448
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
+S+VL AC+ LD G +H +I + ++YD + L DMY KCG + ++++F++
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 164 YSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEK------EDVTLTSLIDMYLK 213
N W M+ G G V + + E+ ++ L S++
Sbjct: 509 MPE------KNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH 562
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF--- 270
CG +D GL FN M + + G C +VD+ S L EA +
Sbjct: 563 CGLVDKGLWYFNSMEKVYGIKPKGKHYTC----------VVDLLSRSGRLYEAEEFIRTI 612
Query: 271 ---DQYSSWAASAYGNVALWNSMISG------YVLNEQNEEAITLLSHIH-SSGMCID 318
+ ++WAA G + I+ + L E N LLS+I+ S+G ID
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWID 670
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/661 (28%), Positives = 307/661 (46%), Gaps = 110/661 (16%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKL---EYDTVLMNTLLDMYVKCG--SLTRKLFD 162
Y ++L+ C+ + + IH L Y L+++L Y CG RKLFD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 163 QYSN-----WAAS---------AYGNVALWNSMLSGGKQ--------------------- 187
+ N W A +Y + L+ ML+ G++
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 188 ----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
+HA V GF+ + SL+ MY+ CGE++ +F+ M ER +VSW +I G F
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 244 --------------------ECSCFTL--------------------------------- 250
E C T+
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 251 --SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
++L+DMY+ C + EA+ +F + +V W +M++GY+LN A+ L
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDK------RDVVSWTTMMNGYILNGDARSALLLCQ 314
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ + + T S L AC +L ++ + +HG + E + IV + LID+YA+
Sbjct: 315 MMQFESVKPNFVTLASVLSACASL--YSLKHGRCLHGWAIRQKLESEVIVETALIDMYAK 372
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
NV + +F + K+ W+ +I GC +GL+ A LF+ M+ D N ++S+
Sbjct: 373 CNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSL 432
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP--ER 486
L + L L++ + +H + ++ GF T LID+Y KCG ++ +F +P ++
Sbjct: 433 LPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDK 492
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
D+++W+ II G G +G + AI+ F +M+QS +KPNEITF +L AC HAGLV+E +F
Sbjct: 493 DIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLF 552
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M + + +HY C++DLLG+AG ++A +LI M F+P+ +W ++L +C H N
Sbjct: 553 KFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHEN 612
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+L + A+ L P + YV+L+N+Y+ +G W VR +G K S IE
Sbjct: 613 VELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIE 672
Query: 666 V 666
V
Sbjct: 673 V 673
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 185/454 (40%), Gaps = 121/454 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L C + ++ G+ +H + L +DI N+LL MYA ++++A +F
Sbjct: 223 DCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIF 282
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM ++++VSWTTM+ Y N A+ L M+++ SV+PN ++VL AC+ L
Sbjct: 283 YEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSL 341
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYG- 173
GR +H R+KLE + ++ L+DMY KC +L+ ++F + S W A G
Sbjct: 342 KHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGC 401
Query: 174 -----------------------NVALWNSMLSG---------GKQVHAFCVKRGFEKED 201
N A NS+L + +H + ++ GF
Sbjct: 402 IHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI 461
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMP--ERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
T LID+Y KCG ++ +FN +P ++D+++W+ II G
Sbjct: 462 EVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG------------------ 503
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
Y ++ E AI+L + SG+ +
Sbjct: 504 ----------------------------------YGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN-----------LIDLYA 367
TFTS L AC H +V G L +++ N +IDL
Sbjct: 530 ITFTSILHAC-------------SHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLG 576
Query: 368 RLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
R G ++ A EL + + + W L+ C H
Sbjct: 577 RAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 294/597 (49%), Gaps = 61/597 (10%)
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLF-------DQYSNWAASAYGNVALWN 179
ER+ E + V N LL+ Y + G + KLF ++S + S
Sbjct: 5 ERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANT 64
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
L GK +HA ++ G E ++ SL+DMY KCG + D L +F + DVV+W+ +I
Sbjct: 65 GSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMI 124
Query: 240 VGCFE--------------------CSCFTLSALVDMYSNCNVL---------------- 263
G + + FTLS+LV +N L
Sbjct: 125 TGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE 184
Query: 264 -------------CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
++R + D + A ++ WN+++SG+ ++ + +
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G + +TF S L++C +LL+ F QVH I+ + + D VG+ L+D+YA+
Sbjct: 245 LLEGFKPNMFTFISVLRSCSSLLD--PEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
++ A F RL +D+ +W+ +I G + A FR M N++ ++S L
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS +A+L G+Q+HA VK G + ++L+D+Y KCG ++ A+FK + RD+VS
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W II G Q+G+ ++A+ F+ M+ + P+E TF+GVLSAC GLVEE F SM
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
YG+ P +EHY CMVD+LG+AG F++ + I EM P IW ++L AC+ H N
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A++L P S Y++LSN++A+ G WD + +R G +K+ G SW+EV
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEV 599
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/623 (22%), Positives = 249/623 (39%), Gaps = 144/623 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C S+++GK LH ++ G D F G +L+ MY+ ++ DA K+F ++ ++
Sbjct: 58 LKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDV 117
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W+ M+T A L+ H++ PN F S+++ + GDL G+ IH
Sbjct: 118 VAWSAMITGLDQQGHGQEAAELF-HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176
Query: 130 RITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
I + E D ++ N L+ MY+K C K+F+ +N ++ WN++LSG
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN------PDLVSWNALLSGFYD 230
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQVHA +K + +D
Sbjct: 231 SQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFV 290
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
T+L+DMY K ++D F+ + RD+ SWT II G
Sbjct: 291 GTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISG---------------------- 328
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
Y +Q E+A+ + G+ + YT
Sbjct: 329 ------------------------------YAQTDQAEKAVKYFRQMQREGIKPNEYTLA 358
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S L C ++ + Q+H + V +G+ D VGS L+DLY + G ++ A +F L
Sbjct: 359 SCLSGCSHMATLEN--GRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+D+V+W+ +I G ++HG A FR M++ ++ VL CS + + GK+
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
D ++ P + + ++ G+ G+
Sbjct: 477 ----------------------------RFDSMSKIYGINPS--IEHYACMVDILGRAGK 506
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
E + +EM L P + + VL AC+ G V+ + K + +EP ++ Y
Sbjct: 507 FNEVKIFIEEM---NLTPYSLIWETVLGACKLHGNVDFGE---KAAKKLFEMEPMMDSSY 560
Query: 564 CMV-DLLGQAGCFDDAEQLIAEM 585
++ ++ G +DD + A M
Sbjct: 561 ILLSNIFASKGRWDDVRNIRALM 583
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ LR C + GK +H IIK D F G L+ MYA L DA FD +
Sbjct: 256 FISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLV 315
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++I SWT +++ Y + A++ + M G ++PN + ++ L CS L+ GR
Sbjct: 316 NRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREG-IKPNEYTLASCLSGCSHMATLENGR 374
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + D + + L+D+Y KCG + + + ++ WN+++SG
Sbjct: 375 QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH----AEAIFKGLISRDIVSWNTIISGY 430
Query: 186 KQ-------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
Q + AF + G ++ T ++ G +++G F+ M +
Sbjct: 431 SQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 304/616 (49%), Gaps = 53/616 (8%)
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + +++ +W M++ Y + IR ++ + + P+ + +VLKAC D
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
G IH + +D + +L+ +Y + ++ R LFD+ ++ W
Sbjct: 102 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM------PVRDMGSW 152
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
N+M+SG Y + G + L L N + D V+ +
Sbjct: 153 NAMISG--------------------------YCQSGNAKEALTLSNGLRAMDSVTVVSL 186
Query: 239 IVGCFECSCFTLSALVDMYS-----NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ C E F + YS +L + +K+FD+ ++ WNS+I
Sbjct: 187 LSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRM------YVRDLISWNSIIKA 240
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
Y LNEQ AI+L + S + D T S L + ++ L + R V G + G+
Sbjct: 241 YELNEQPLRAISLFQEMRLSRIQPDCLTLIS-LASILSQLG-DIRACRSVQGFTLRKGWF 298
Query: 354 L-DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
L D +G+ ++ +YA+LG V SA +F+ LP DV++W+ +I G ++G S A ++
Sbjct: 299 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 358
Query: 413 MINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M + NQ SVL CS +LR+G ++H +K G + +TSL DMY KCG
Sbjct: 359 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 418
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
++D L+LF +P + V W +I G +G ++A+ F+EM+ +KP+ ITF+ +LS
Sbjct: 419 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 478
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H+GLV+E F M+ +YG+ P L+HY CMVD+ G+AG + A + I M +PD
Sbjct: 479 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 538
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
+IW ++L AC H N L I +E L PE +V+LSN+YA+ G W+ + ++R
Sbjct: 539 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 598
Query: 652 KKLG-EKKAGMSWIEV 666
G K G S +EV
Sbjct: 599 HGKGLRKTPGWSSMEV 614
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/535 (22%), Positives = 233/535 (43%), Gaps = 101/535 (18%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ C R++ G +HC +K+G D++ +L+ +Y+ + ++ +A LF
Sbjct: 85 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 141
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DEM +++ SW M++ Y + A+ L N + SV ++L AC+ +GD
Sbjct: 142 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV-----TVVSLLSACTEAGDF 196
Query: 122 DLGRLIHERITREKLE----------------YDTVLMNTLLDMY------VKCGSLTRK 159
+ G IH + LE D + N+++ Y ++ SL ++
Sbjct: 197 NRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 256
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGG-----KQVHAFCVKRGFEKEDVTL-TSLIDMYLK 213
+ + S ++L + + G + V F +++G+ ED+T+ +++ MY K
Sbjct: 257 M--RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 314
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
G +D A+FN++P DV+SW II G Y+ EA ++++
Sbjct: 315 LGLVDSARAVFNWLPNTDVISWNTIISG---------------YAQNGFASEAIEMYN-- 357
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
++ E+ E + + T+ S L AC
Sbjct: 358 ---------------------IMEEEGE-------------IAANQGTWVSVLPACSQAG 383
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
R +++HG ++ +G LD V ++L D+Y + G ++ AL LF+++P+ + V W+ L
Sbjct: 384 AL--RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTL 441
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I HG A +LF++M++ + ++L CS + G+ +C +
Sbjct: 442 IACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ----WCFEMMQ 497
Query: 454 EKEDITLT-----SLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
IT + ++DMY + G+++ L K M + D W ++ C +G
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 552
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 167/457 (36%), Gaps = 138/457 (30%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD +V L C + +G ++H IK+GL ++ L D K+
Sbjct: 178 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------------LRDCQKV 222
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++++SW +++ AY N++P AI L+ M ++P+ ++ S GD
Sbjct: 223 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGD 281
Query: 121 LDLGRLIHERITREK--LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
+ R + R+ LE D + N ++ MY K G + R +F NW + +V
Sbjct: 282 IRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVF----NWLPNT--DVI 334
Query: 177 LWNSMLSG---------------------------------------------GKQVHAF 191
WN+++SG G ++H
Sbjct: 335 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 394
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
+K G + +TSL DMY KCG ++D L+LF +P + V W +I C F
Sbjct: 395 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA----CHGF--- 447
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+ E+A+ L +
Sbjct: 448 ---------------------------------------------HGHGEKAVMLFKEML 462
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDL 365
G+ D TF + L AC S L G + DY + +L +D+
Sbjct: 463 DEGVKPDHITFVTLLSAC-------SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 515
Query: 366 YARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
Y R G +++AL+ + + D W L+ C HG
Sbjct: 516 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 552
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR-DMINSNQDVN 421
+ + L KS + F + +DV AW+ +I G + G +S F M++S +
Sbjct: 26 VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
SVLK C + G ++H +K GF + SLI +Y + + + LF
Sbjct: 86 YRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 142
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVE 540
MP RD+ SW +I G Q+G AKEA+ + + L+ + +T + +LSAC AG
Sbjct: 143 EMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFN 197
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
TI S ++GLE L D +++ M + D W S++KA
Sbjct: 198 RGVTIH-SYSIKHGLESEL---------------LRDCQKVFDRM-YVRDLISWNSIIKA 240
Query: 601 CETHNNT-KLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
E + + +S+ E L+ D + L+++ + LG
Sbjct: 241 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 280
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 310/664 (46%), Gaps = 120/664 (18%)
Query: 110 AVLKACSLS-GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSN 166
++L+ C+ S L +L+H+RI L D VL +L+++Y C R +F+ +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD- 66
Query: 167 WAASAYGNVALWNSMLSG------------------------------------------ 184
+V +WNS++SG
Sbjct: 67 ----IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW------ 235
G+ +H VK G+ + V +SL+ MY K ++ L +F+ MPERDV SW
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 236 -----------------------------TGIIVGC--------------------FECS 246
T I C FE
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ SALVDMY C+ L AR++F + + A WNSMI GYV ++ + +
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA------WNSMIKGYVAKGDSKSCVEI 296
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L+ + G T TS L AC N + +F +HG ++ S D V +LIDL
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF---IHGYVIRSVVNADIYVNCSLIDL 353
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G A +F + K +W+ +I G A ++ M++ +
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+SVL CS LA+L +GKQ+H + E +++ L++L+DMY KCG + +F +P+
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+DVVSWT +I G +G+ +EA+ F EM + LKP+ +T L VLSAC HAGL++E
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKACETH 604
F+ M+ +YG+EP +EHY CM+D+LG+AG +A ++I + P D + +++ AC H
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
L IA L+ P+D S Y++L N+YA+ WD+ +VR K++G KK G SW
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 664 IEVS 667
IE+S
Sbjct: 654 IEMS 657
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 334/682 (48%), Gaps = 54/682 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + AL+ C R +K+G +H G + + N ++ MY ++A +
Sbjct: 1 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYI 58
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRP-NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F+ + ++VSW T+++ + N+ N+ +R+ + V + F YS L C S
Sbjct: 59 FENLVDPDVVSWNTILSGFDDNQIALNFVVRM-----KSAGVVFDAFTYSTALSFCVGSE 113
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
LG + + + LE D V+ N+ + MY + GS R++FD+ + ++
Sbjct: 114 GFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEM------PFKDMIS 167
Query: 178 WNSMLSGGKQVHAF----------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WNS+LSG Q F ++ G E + V+ TS+I C E D LA
Sbjct: 168 WNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTC--CHETDLKLA----- 220
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
R + I +E + L+ YS C VL + +F Q S NV W
Sbjct: 221 --RQIHGLC--IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSER------NVVSW 270
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MIS ++A+++ ++ G+ + TF L A N + L++HGL
Sbjct: 271 TTMIS-----SNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAV--KCNEQIKEGLKIHGLC 323
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G+ + VG++ I +YA+ ++ A + F + +++++W+ +I G ++G + A
Sbjct: 324 IKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEAL 383
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLA--SLRRGKQVHAFCVKRGFEKEDITLTSLID 465
+F N++ SVL + S++ G++ HA +K G + ++L+D
Sbjct: 384 KMFLSATAETMP-NEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLD 442
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G I++ +F M +R+ WT II +G + F EMI+ + P+ +T
Sbjct: 443 MYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVT 502
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL+AC G+V++ I M +Y LEP EHY CMVD+LG+AG +AE+L++E+
Sbjct: 503 FLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P P +++ SML +C H N K+ + +AE + PE YV + N+YA WD +
Sbjct: 563 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEQWDKAA 622
Query: 646 KVRKAGKKLG-EKKAGMSWIEV 666
++RKA +K K+AG SWI+V
Sbjct: 623 EIRKAMRKKNVSKEAGFSWIDV 644
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 314/623 (50%), Gaps = 39/623 (6%)
Query: 54 LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLK 113
L+DA LFD M RKN+V+WTT ++ T N +P A ++ MLE G V N F +A L
Sbjct: 58 LSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESG-VAANDFACNAALA 116
Query: 114 ACSLSGDL--DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAA 169
AC+ +G LG +H R D + + L+++Y +CGS+ ++F + A
Sbjct: 117 ACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRME--AP 174
Query: 170 SAYGNVALWNSMLSGG---KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
G +L +++ G + V C +++G + + T+TS M +C + G +
Sbjct: 175 DVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTS---MLAECPRMI-GEQIH 230
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+M + ++G S + +AL+D YS A +F+ S NV
Sbjct: 231 GYMLK---------VMG--SQSVYASTALIDFYSRYGDFDMAETVFENLDS------KNV 273
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
W SM+ + + + E+A+ + S + S + + + F+ AL AC ++ Q+H
Sbjct: 274 VSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVC-----LGRQIH 328
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
+ D V + L+ +Y R G V + ++ D+V+W+ I ++G +
Sbjct: 329 CSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSE 388
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A L M + N + SS L C+ LA L +G+Q+H +K G + + T +LI
Sbjct: 389 KAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALI 448
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
+MY KCG+I F M DV+SW +I G Q+G A + F EM S +P++
Sbjct: 449 NMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDS 508
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TF+ VL C HAGLV+E T F M YGL P HY CM+D+LG+ G FD+A +I
Sbjct: 509 TFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKN 568
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
MPF+PD IW ++L +C+ H N + + ++L+ S D + YV++SN+YA W
Sbjct: 569 MPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDA 628
Query: 645 SKVRKAGKKLGEKK-AGMSWIEV 666
+VR+ ++G KK AG SWIEV
Sbjct: 629 ERVRRRMDEIGVKKDAGWSWIEV 651
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D ++ +D + G + AL+LF R+P+K+VVAW+ I GCT++G A +F DM+
Sbjct: 41 DVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADML 100
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRR--GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
S N F ++ L C+ + G+QVH+ V+ GF + + LI++Y +CG
Sbjct: 101 ESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGS 160
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ +F+ M DVV +T ++ +NG A+ +M++ L+PNE T +L+
Sbjct: 161 MWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAE 220
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C ++ E I M G + + ++D + G FD AE + + K +
Sbjct: 221 CPR--MIGE--QIHGYMLKVMGSQ-SVYASTALIDFYSRYGDFDMAETVFENLDSK-NVV 274
Query: 593 IWASMLKAC 601
W SM++ C
Sbjct: 275 SWCSMMQLC 283
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 166/420 (39%), Gaps = 98/420 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H ++K SQ ++ L+ Y+ + + A +F+ + KN+VSW +M+
Sbjct: 226 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIR 285
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ R A+R+++ M+ +VEPN F +S L AC G + LGR IH + L D
Sbjct: 286 DGRLEDALRVFSEMISE-AVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIR 341
Query: 142 LMNTLLDMYVKCG--SLTRKLFDQYSN-----WAASAYGN---------VALWNSM---- 181
+ N LL MY + G S + + N W A+ N VAL M
Sbjct: 342 VSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 401
Query: 182 --------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
L G+Q+H +K G + + T +LI+MY KCG+I
Sbjct: 402 FTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSAR 461
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
F+ M DV+SW +I G + + N++ EA +S +S +
Sbjct: 462 LAFDVMNLHDVMSWNSLIHGLAQ------------HGAANLVLEA------FSEMCSSGW 503
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
+ I +L + +G+ + TF R
Sbjct: 504 ---------------QPDDSTFIAVLVGCNHAGLVKEGETFF--------------RLMT 534
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+GL T + + +ID+ R G AL + +P + DV+ W L+ C H
Sbjct: 535 DRYGLTPTPSHY------ACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLH 588
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL CG S+ G+ +HC IK L DI N LLSMY +++ + ++ +
Sbjct: 314 ALGACG---SVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPD 370
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT ++A N A+ L M G PN + +S+ L +C+ LD GR +H
Sbjct: 371 LVSWTAAISANFQNGFSEKAVALLLQMHSEG-FTPNDYAFSSGLSSCADLALLDQGRQLH 429
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ ++ N L++MY KCG + R FD + +V WNS++ G
Sbjct: 430 CLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMN------LHDVMSWNSLIHGLA 483
Query: 187 Q-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
Q + AF G++ +D T +++ G + +G F M +R
Sbjct: 484 QHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDR 536
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 229/402 (56%), Gaps = 7/402 (1%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L+AL++MYS+CN AR + D WA+ +V WN++I+GY+ +A+
Sbjct: 41 FVLNALINMYSSCNYPASARLVLDSAPRWAS----DVVSWNTIIAGYIRGGMPNKALQSF 96
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + +D T + L AC + H L+V +G+E++ +GS+L+ +YA
Sbjct: 97 HQMAKEQVRLDEVTLLNVLVACAR--TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYA 154
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G V+ A +F+R+P+++VV W+ +I GCT+ G A LFRDM + + I++
Sbjct: 155 KCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIAT 214
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ C + +L G+ +HA+C G KE SLIDMY KCG+++ +F+ + +RD
Sbjct: 215 VVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRD 274
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
V +WT +I+G NG EA+ F +M + ++ PNE+ FLGVL+AC H GLVE+ + F
Sbjct: 275 VFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHF 334
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M Y L P +EHY CMVDLLG+A +AEQ I +MP PD +W S+L AC
Sbjct: 335 HRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQ 394
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
L AE++ P+ +V+LSNVYAT W ++ VR
Sbjct: 395 VGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRWVDVNNVR 436
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 194/428 (45%), Gaps = 48/428 (11%)
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAA 169
+ A + LD+G H + L D+ ++N L++MY C + R + D WA+
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 170 SAYGNVALWNSMLSG-------GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
+V WN++++G K + +F K ++VTL +++ + G + G
Sbjct: 72 ----DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVG 127
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+L + + +++ FE +C+ S+LV MY+ C ++ EAR++F++
Sbjct: 128 -SLCHAL----------VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPE----- 171
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
NV W SMI+G + + +EA+ L + +G+ D T + + +C + +
Sbjct: 172 -RNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRY 230
Query: 341 LQV----HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
L HGL G EL V ++LID+Y++ G+V A ++F L K+DV W+ +IMG
Sbjct: 231 LHAYCDGHGL----GKELS--VKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMG 284
Query: 397 CTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFE 454
+GL A LF M ++ + N+ I VL CS + +G H
Sbjct: 285 FAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLV 344
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC---GQNGRAKEAIAY 510
++D+ + + + K MP DVV W ++ C GQ G A+ A
Sbjct: 345 PRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAER 404
Query: 511 FQEMIQSR 518
+++ R
Sbjct: 405 IEQLEPKR 412
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 55/281 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-- 66
A+ + S+ G H +K L+ D F N L++MY+ A + D R
Sbjct: 11 AISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWA 70
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++VSW T++ Y PN A++ + H + V + VL AC+ +G + +G L
Sbjct: 71 SDVVSWNTIIAGYIRGGMPNKALQSF-HQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H + E + + ++L+ MY KCG + R++F++ NV W SM++G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPE------RNVVCWTSMIAG 183
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ +HA+C G KE
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKE 243
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG+++ +F + +RDV +WT +I+G
Sbjct: 244 LSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMG 284
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C + ++K G H ++ G + + G++L+SMYA + +A ++
Sbjct: 106 LDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRV 165
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +N+V WT+M+ T + R A+ L+ M + V+ + + V+ +C G
Sbjct: 166 FNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDM-QIAGVKADDATIATVVSSCGQMGA 224
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LDLGR +H L + + N+L+DMY KCG + + Y + +V W
Sbjct: 225 LDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKA----YQIFRGLTKRDVFTWTV 280
Query: 181 MLSG 184
M+ G
Sbjct: 281 MIMG 284
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ + ++ + + + SL G Q HA +K + L +LI+MY C +
Sbjct: 3 LDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLV 62
Query: 480 FKFMPE--RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
P DVVSW II G + G +A+ F +M + +++ +E+T L VL AC G
Sbjct: 63 LDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTG 122
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
++ ++ ++ G E + +V + + G ++A ++ MP + + W SM
Sbjct: 123 AMKVG-SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER-NVVCWTSM 180
Query: 598 LKACETHNNTK 608
+ C K
Sbjct: 181 IAGCTQSGRFK 191
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + CGQ ++ G+ LH +GL +++ N+L+ MY+ +N A+++F +
Sbjct: 212 IATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLT 271
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++ +WT M+ + N A+ L+ M V PN ++ VL ACS G ++ G
Sbjct: 272 KRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGY 331
Query: 126 LIHERITR 133
R+++
Sbjct: 332 HHFHRMSK 339
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 211/741 (28%), Positives = 347/741 (46%), Gaps = 115/741 (15%)
Query: 1 MDLRRIVEALRHC--GQRRSIKQGK----SLHCRIIKYGLSQDIFTGNNLLSMYADFTSL 54
+ +R I EA +H R+ I+ GK RI +++ T N+++S+ A +
Sbjct: 5 LGIRSIGEAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARI 64
Query: 55 NDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
DA +LFD+M+ +N+VSW TM+ Y N A L++ M E + F ++ ++
Sbjct: 65 RDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVM-----PERDNFSWALMITC 119
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAY 172
+ G L+ R + E + +KL DT N ++ Y K G +K+F+Q
Sbjct: 120 YTRKGKLEKARELLELVP-DKL--DTACWNAMIAGYAKKGQFNDAKKVFEQMP------A 170
Query: 173 GNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
++ +NSML+G Q + F E+ V+ ++ Y+K G++ LF +
Sbjct: 171 KDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKI 230
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
P + VSW ++ G + + EAR+LFD+ S NV W
Sbjct: 231 PNPNAVSWVTMLCGL---------------AKYGKMAEARELFDRMPS------KNVVSW 269
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH--- 344
N+MI+ YV + Q +EA+ L + DS ++T+ + I + + A QV+
Sbjct: 270 NAMIATYVQDLQVDEAVKLFKKMPHK----DSVSWTTIINGYIRVGKLDE--ARQVYNQM 323
Query: 345 -------------GLIVTSGYE-----------LDYIVGSNLIDLYARLGNVKSALELFH 380
GLI + D + +++I Y+R G + AL LF
Sbjct: 324 PCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFR 383
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN----------------------- 417
++P K+ V+W+ +I G + G A +F+ M N
Sbjct: 384 QMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKS 443
Query: 418 --------QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
+ +Q + L C+ LA+L+ G Q+H + +K G+ + +LI MY K
Sbjct: 444 LVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAK 503
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + +F+ + D++SW +I G NG A +A F++M R+ P+E+TF+G+
Sbjct: 504 CGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGM 563
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC HAGL + IF M ++ +EP EHY C+VDLLG+ G ++A + M K
Sbjct: 564 LSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKA 623
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR- 648
+ +W S+L AC H N +L AE+L P + S Y+ LSN++A G W+ + +VR
Sbjct: 624 NAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRM 683
Query: 649 -KAGKKLGEKKAGMSWIEVSS 668
GK+ G K+ G SWIEV +
Sbjct: 684 LMRGKRAG-KQPGCSWIEVQN 703
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 275/544 (50%), Gaps = 71/544 (13%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--- 241
GK VH + VK +KE V +L+DMY KCG I + +F ++VVSW ++ G
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 242 ----------------------------------CF---------ECSCFTL-------- 250
CF E C++L
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 251 ---SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+A V Y+ C L A+++F S ++ WN++I G+ + N+ ++L
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS------WNALIGGHA--QSNDPRLSLD 232
Query: 308 SHIHS--SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+H+ SG+ DS+T S L AC L + R +VHG I+ + E D V +++ L
Sbjct: 233 AHLQMKISGLLPDSFTVCSLLSACSKLKSL--RLGKEVHGFIIRNWLERDLFVYLSVLSL 290
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y G + + LF + K +V+W+ +I G ++G A +FR M+ + +
Sbjct: 291 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 350
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
V CS L SLR G++ HA+ +K E + SLIDMY K G I +F + E
Sbjct: 351 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 410
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+ SW +I+G G +G AKEAI F+EM ++ P+++TFLGVL+AC H+GL+ E
Sbjct: 411 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 470
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA-EMPFKPDKTIWASMLKACETH 604
MK +GL+P+L+HY C++D+LG+AG D A +++A EM + D IW S+L +C H
Sbjct: 471 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 530
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N ++ +A +L PE P YV+LSN+YA LG W+ + KVR+ ++ K AG SW
Sbjct: 531 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 590
Query: 664 IEVS 667
IE++
Sbjct: 591 IELN 594
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 197/500 (39%), Gaps = 111/500 (22%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + R I GK +H +K L +++ N L+ MY+ + +A +F
Sbjct: 41 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 100
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGD 120
KN+VSW TMV +++ + + ML G V+ + + C
Sbjct: 101 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 160
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L + +H +++ Y+ ++ N + Y KCGSL+ +++F + ++ W
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS------W 214
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+++ G GK+VH F ++
Sbjct: 215 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 274
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL- 253
E++ S++ +Y+ CGE+ ALF+ M ++ +VSW +I G + + F AL
Sbjct: 275 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ-NGFPDRALG 333
Query: 254 -----------------VDMYSNCNVLCEAR----------------------KLFDQYS 274
+ ++ C++L R L D Y+
Sbjct: 334 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 393
Query: 275 -----SWAASAYGNV-----ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ ++ + + A WN+MI GY ++ +EAI L + +G D TF
Sbjct: 394 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 453
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF--H 380
L AC + L++ R+ Q+ + G + + + +ID+ R G + AL +
Sbjct: 454 VLTACNHSGLIHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 510
Query: 381 RLPKKDVVAWSGLIMGCTKH 400
+ DV W L+ C H
Sbjct: 511 MSEEADVGIWKSLLSSCRIH 530
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 240/422 (56%), Gaps = 17/422 (4%)
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
T + L+++Y+ C AR++FD A + ++ WN+MI+GY N ++ EA+ L S
Sbjct: 93 TCNILINLYTKCGQNDCARRVFD------AMSVRSIISWNTMIAGYTHNREDVEALKLFS 146
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYELDYIVGSNLID 364
+H G + +T +S L AC +++A+ Q+H + + + VG+ +D
Sbjct: 147 RMHREGTQMTEFTLSSTLCACA------AKYAIIECKQLHTIAIKLALDSSSFVGTAFLD 200
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+YA+ +K A +F +P+K V WS L G ++GL+ LF+ + +F
Sbjct: 201 VYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFT 260
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+SS+L C+ LA + G QVHA VK GF + TSL+D+Y KCG+I+ +F M
Sbjct: 261 VSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME 320
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
E++VV W +I ++ + EA+ F++M Q + PNE+T+L +LSAC H GLVEE
Sbjct: 321 EKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRH 380
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F + + EP++ HY CMVD+LG++G D+A +L+ +MPF+P ++W S+L + H
Sbjct: 381 YFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIH 440
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSW 663
N +L I AEQL PE+ +V+LSNVYA G W+++ RK + G KK G SW
Sbjct: 441 KNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSW 500
Query: 664 IE 665
IE
Sbjct: 501 IE 502
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 144/305 (47%), Gaps = 12/305 (3%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQV----HGLIVTSGYELDYIVGSNLIDLYARLGNV 372
ID +T L+ C R +L V HGL + G D + + LI+LY + G
Sbjct: 54 IDVFTLHELLQLCAK------RRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQN 107
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F + + +++W+ +I G T + + A LF M + +F +SS L C
Sbjct: 108 DCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCAC 167
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ ++ KQ+H +K + T+ +D+Y KC I D +F+ MPE+ V+W+
Sbjct: 168 AAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWS 227
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+ G QNG +E + FQ + ++ E T +LS C L+ E T ++ +
Sbjct: 228 SLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEG-TQVHAVIVK 286
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+G +L +VD+ + G + + ++ A+M K + +W +M+ + H ++ I
Sbjct: 287 HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEK-NVVLWNAMIASFSRHAHSWEAMI 345
Query: 613 IAEQL 617
+ E++
Sbjct: 346 LFEKM 350
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 41/279 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D+ + E L+ C +RRS+ GKS H I +GL D T N L+++Y + A ++
Sbjct: 54 IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M+ ++I+SW TM+ YT N+ A++L++ M G+ + F S+ L AC+
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGT-QMTEFTLSSTLCACAAKYA 172
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL------------------------ 156
+ + +H + L+ + + LD+Y KC +
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232
Query: 157 ----------------TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKE 200
T++ Q + + S+ + +++ G QVHA VK GF +
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRN 292
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
TSL+D+Y KCG+I+ +F M E++VV W +I
Sbjct: 293 LFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMI 331
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/642 (27%), Positives = 315/642 (49%), Gaps = 37/642 (5%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D+ NN L + L DA LFD++ +++ VSWT +++ Y ++ + A+RL++ M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + F+ S LK C L + G +H + L + + LLDMY+K G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 157 TR--KLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKEDVTLTSL--- 207
R K+FD+ N W ++++G G G + V S
Sbjct: 168 GRSCKVFDEMPT------RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221
Query: 208 --IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+ G ++ G ++ T + F+ + F ++L MY+ C L
Sbjct: 222 IALKASADSGALNHGRSIH-----------TQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
F + + +V W ++++ Y+ + + + + +S + + YTF++
Sbjct: 271 GLHTFRKMRTL------DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
+ C N ++ Q+H ++ G+ V ++++ LY++ G + S ++F + +
Sbjct: 325 ISCCANFARL--KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D++ WS +I ++ G A+ M + N+F ++SVL VC +A L +GKQ+H
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A + G E+ + ++LI MY KCG I + +F + D++SWT +I G ++G ++
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EAI F+ + + L+P+ +TF+GVL+AC HAG+V+ + F SM +Y + P EHY CM
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCM 562
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLL +AG DAE LI MP + D +W+++L+AC H + A ++L P
Sbjct: 563 IDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCA 622
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++ L+N++A G W + +R K G K+ G S ++V
Sbjct: 623 GTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKV 664
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 143/585 (24%), Positives = 247/585 (42%), Gaps = 96/585 (16%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG + G +LH +K GL +F G+ LL MY + + K+FDEM +N
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRN 181
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+WT ++T + ++ M VE + + Y+ LKA + SG L+ GR IH
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGR-SKVEYDSYAYAIALKASADSGALNHGRSIH 240
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+ ++ + ++ + N+L MY KCG L YG +
Sbjct: 241 TQTLKKGFDENSFVANSLTTMYNKCGKLD--------------YG--------------L 272
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC-- 242
H F R + V+ T+++ Y++ G+ D GL F M +V+ +++ +I C
Sbjct: 273 HTFRKMRTLDV--VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 243 ------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
F + ++++ +YS C L K+F + + ++
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVF------CSMKFRDI 384
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
W+++I+ Y EEA LS + S G + + S L C ++ Q+H
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ--GKQLH 442
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
+++ G E +V S LI +YA+ G++ A ++F K D+++W+ +I G +HG +
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-----KEDIT 459
A LF ++ + VL CS HA V GF +D
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFNSMSKDYH 551
Query: 460 LTS-------LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+T +ID+ + G + D L + MP + D V W+ ++ C +G
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611
Query: 512 QEMIQSRLKPN----EITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
E++ +L PN IT + +A G +EA I MK +
Sbjct: 612 AEVL--KLDPNCAGTHITLANIFAA---KGKWKEAANIRMLMKSK 651
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
++D +N + + + ++K A +LF +LP++D V+W+ +I G +S A LF
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 413 M-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M + S ++ F++S LK C + G +H F VK G ++L+DMY+K G
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIG 165
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
EI +F MP R+ V+WT +I G + G ++ +AYF M +S+++ + + L
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225
Query: 532 ACRHAGLVEEAWTIFT 547
A +G + +I T
Sbjct: 226 ASADSGALNHGRSIHT 241
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++QGK LH ++ GL Q + L+ MYA S+ +A K+F +
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ +I+SWT M++ Y + AI L+ ++ + G + P+ + VL ACS +G +DLG
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVG-LRPDSVTFIGVLTACSHAGMVDLG 539
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/642 (27%), Positives = 315/642 (49%), Gaps = 37/642 (5%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
D+ NN L + L DA LFD++ +++ VSWT +++ Y ++ + A+RL++ M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ + F+ S LK C L + G +H + L + + LLDMY+K G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 157 TR--KLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKEDVTLTSL--- 207
R K+FD+ N W ++++G G G + V S
Sbjct: 168 GRSCKVFDEMPT------RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221
Query: 208 --IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+ G ++ G ++ T + F+ + F ++L MY+ C L
Sbjct: 222 IALKASADSGALNHGRSIH-----------TQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
F + + +V W ++++ Y+ + + + + +S + + YTF++
Sbjct: 271 GLHTFRKMRTL------DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
+ C N ++ Q+H ++ G+ V ++++ LY++ G + S ++F + +
Sbjct: 325 ISCCANFARL--KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D++ WS +I ++ G A+ M + N+F ++SVL VC +A L +GKQ+H
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A + G E+ + ++LI MY KCG I + +F + D++SWT +I G ++G ++
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EAI F+ + + L+P+ +TF+GVL+AC HAG+V+ + F SM +Y + P EHY CM
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCM 562
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
+DLL +AG DAE LI MP + D +W+++L+AC H + A ++L P
Sbjct: 563 IDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCA 622
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++ L+N++A G W + +R K G K+ G S ++V
Sbjct: 623 GTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKV 664
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 143/585 (24%), Positives = 247/585 (42%), Gaps = 96/585 (16%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG + G +LH +K GL +F G+ LL MY + + K+FDEM +N
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRN 181
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+WT ++T + ++ M VE + + Y+ LKA + SG L+ GR IH
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGR-SKVEYDSYAYAIALKASADSGALNHGRSIH 240
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
+ ++ + ++ + N+L MY KCG L YG +
Sbjct: 241 TQTLKKGFDENSFVANSLTTMYNKCGKLD--------------YG--------------L 272
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC-- 242
H F R + V+ T+++ Y++ G+ D GL F M +V+ +++ +I C
Sbjct: 273 HTFRKMRTLDV--VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 243 ------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
F + ++++ +YS C L K+F + + ++
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVF------CSMKFRDI 384
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
W+++I+ Y EEA LS + S G + + S L C ++ Q+H
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ--GKQLH 442
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
+++ G E +V S LI +YA+ G++ A ++F K D+++W+ +I G +HG +
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE-----KEDIT 459
A LF ++ + VL CS HA V GF +D
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFNSMSKDYH 551
Query: 460 LTS-------LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+T +ID+ + G + D L + MP + D V W+ ++ C +G
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611
Query: 512 QEMIQSRLKPN----EITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
E++ +L PN IT + +A G +EA I MK +
Sbjct: 612 AEVL--KLDPNCAGTHITLANIFAA---KGKWKEAANIRMLMKSK 651
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
++D +N + + + ++K A +LF +LP++D V+W+ +I G +S A LF
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 413 M-INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
M + S ++ F++S LK C + G +H F VK G ++L+DMY+K G
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIG 165
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
EI +F MP R+ V+WT +I G + G ++ +AYF M +S+++ + + L
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225
Query: 532 ACRHAGLVEEAWTIFT 547
A +G + +I T
Sbjct: 226 ASADSGALNHGRSIHT 241
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L CG ++QGK LH ++ GL Q + L+ MYA S+ +A K+F +
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ +I+SWT M++ Y + AI L+ ++ + G + P+ + VL ACS +G +DLG
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVG-LRPDSVTFIGVLTACSHAGMVDLG 539
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 196/687 (28%), Positives = 320/687 (46%), Gaps = 83/687 (12%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ + +K G H + IK G + IF N L++ YA LNDA KLFDEM +N+ SW
Sbjct: 423 EMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNA 482
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ AY + A L++ + V N M S ++ G LG + + +
Sbjct: 483 IIAAYVKSHNLRQARALFDSAVCKDLVTYNS-MLSGYARSDGYQGQA-LGFFMEMQTAPD 540
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
+ D + T+L+ LT KL ++S GKQ+H+F +K
Sbjct: 541 MIRIDEFTLITMLN-------LTAKL-------------------CVISYGKQLHSFMLK 574
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFECSCFTLSAL 253
+ +SLIDMY KCG + ++ E D VS ++ C C +
Sbjct: 575 TANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAAC--CREGEIDVA 632
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+D++ W +V WN+MISG+V N EE++ L +
Sbjct: 633 LDLF------------------WKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADE 674
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL---- 369
+ + +TF S L AC NL + + +VH ++ + + + S L+D+Y +
Sbjct: 675 KVGWNEHTFASVLSACSNLRSL--KLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMR 732
Query: 370 ---------------------------GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
GN+ A +LF L +K+ W+ L G K
Sbjct: 733 YAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQ 792
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ L + + + I+ S++ C+ A+L GKQ+H++ ++ G + + +S
Sbjct: 793 CEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSS 852
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
L+DMY KCG I +F+ + ++D + + +I G +G EA+ F+EM++ KP+
Sbjct: 853 LVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPD 912
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
ITF+ +LSACRH GLVE F SM +Y + P ++HY CM+DL G+A D A + +
Sbjct: 913 AITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFM 972
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
++P + D IW + L AC + N +L ++LL E+ S+YV L+NVYA G W+
Sbjct: 973 RKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWE 1032
Query: 643 SLSKVR-KAGKKLGEKKAGMSWIEVSS 668
+ ++R K K +K AG SW+ V S
Sbjct: 1033 EMGRIRKKMKGKEVKKNAGCSWVFVES 1059
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 47/259 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C RS+K GK +H ++K L + F + L+ +Y ++ A + E+ +N+
Sbjct: 687 LSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNSELRMQNV 746
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLE----------YGSVE----------------- 102
S T+M+ Y+S A +L++ + E +G V+
Sbjct: 747 YSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRKE 806
Query: 103 ---PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
P+ + +++ AC++ L G+ IH + R ++ DT L ++L+DMY KCGS+
Sbjct: 807 AKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYA 866
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
++F + ++ + ++N M++G Q+ VK GF+ + +T +L+
Sbjct: 867 ERIFREVTD------KDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALL 920
Query: 209 DMYLKCGEIDDGLALFNFM 227
G ++ G F+ M
Sbjct: 921 SACRHGGLVELGEHFFDSM 939
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ ++ + C + ++ GK +H +++ G+ D ++L+ MY+ S+ A ++F
Sbjct: 811 DVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIF 870
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E+ K+ + + M+ Y + N A++L+ M+++G +P+ + A+L AC G +
Sbjct: 871 REVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHG-FKPDAITFVALLSACRHGGLV 929
Query: 122 DLGR 125
+LG
Sbjct: 930 ELGE 933
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 323/668 (48%), Gaps = 47/668 (7%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS----MYADFTSLNDAHKLFDEMARKNIVSW 72
+S + K LH I+ G IF+ +NL S YA + A LFD++++ + SW
Sbjct: 25 QSHSETKRLHALILTLG----IFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSW 80
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M+ Y RP A+ L+ ML G P+ F Y V+KAC +D+G IH +
Sbjct: 81 NAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTF 140
Query: 133 REKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ + DT + NTLL MY+ G + +FD V WN+M++G
Sbjct: 141 KFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQE------RTVISWNTMINGYFRNNC 194
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
V+ + G E + T+ S++ ++ G + + E+ W I+V
Sbjct: 195 AEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGF--WGNIVV- 251
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ALVDMY C + EA L +V W ++I+GY+LN
Sbjct: 252 --------RNALVDMYVKCGQMKEAWLLAKGMDD------KDVVTWTTLINGYILNGDAR 297
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
A+ L + G+ +S + S L AC +L+ N L H + E + IV +
Sbjct: 298 SALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCL--HAWAIRQKIESEVIVETA 355
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LI++YA+ + ++F KK W+ L+ G ++ L A LF+ M+ + +
Sbjct: 356 LINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPD 415
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+S+L + LA L++ +H + ++ GF + L+D+Y KCG + +F
Sbjct: 416 HATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFN 475
Query: 482 F--MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
+ ++D++ W+ II G++G K A+ F +M+QS +KPN +TF VL AC HAGLV
Sbjct: 476 IISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLV 535
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
E +++F M ++ + H++HY CM+DLLG+AG +DA LI MP P+ +W ++L
Sbjct: 536 NEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLG 595
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK- 658
AC H N +L + A PE+ YV+L+ +YA +G W +VR ++G +K
Sbjct: 596 ACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKL 655
Query: 659 AGMSWIEV 666
S IEV
Sbjct: 656 PAHSLIEV 663
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 228/518 (44%), Gaps = 69/518 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ CG I G +H + K+G D F N LL+MY + A +FD M + +
Sbjct: 120 IKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTV 179
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW TM+ Y N A+ +Y M++ G VEP+ +VL AC L +++LGR +H
Sbjct: 180 ISWNTMINGYFRNNCAEDAVNVYGRMMDVG-VEPDCATVVSVLPACGLLKNVELGREVHT 238
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ + + V+ N L+DMYVKCG +
Sbjct: 239 LVQEKGFWGNIVVRNALVDMYVKCGQMKE------------------------------- 267
Query: 190 AFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGC-- 242
A+ + +G + +D VT T+LI+ Y+ G+ L L M + + VS ++ C
Sbjct: 268 AWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGS 327
Query: 243 ------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
E +AL++MY+ CN + K+F ++
Sbjct: 328 LVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVF------MGTSKKRT 381
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
A WN+++SG++ N EAI L + + D TF S L A L + A+ +H
Sbjct: 382 APWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQ--AMNIH 439
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH--RLPKKDVVAWSGLIMGCTKHGL 402
++ SG+ V S L+D+Y++ G++ A ++F+ L KD++ WS +I KHG
Sbjct: 440 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGH 499
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT-LT 461
+A LF M+ S N +SVL CS + G + F +K+ + T
Sbjct: 500 GKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYT 559
Query: 462 SLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ID+ + G ++D L + MP + W ++ C
Sbjct: 560 CMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGAC 597
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 190/418 (45%), Gaps = 49/418 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L CG ++++ G+ +H + + G +I N L+ MY + +A L
Sbjct: 213 DCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLA 272
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K++V+WTT++ Y N A+ L M++ V+PN +++L AC L
Sbjct: 273 KGMDDKDVVTWTTLINGYILNGDARSALMLCG-MMQCEGVKPNSVSIASLLSACGSLVYL 331
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALWN 179
+ G+ +H R+K+E + ++ L++MY K CG+L+ K+F ++ A WN
Sbjct: 332 NHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVF------MGTSKKRTAPWN 385
Query: 180 SMLSGGKQ-------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
++LSG Q + F + + + + T SL+ Y ++ + + ++
Sbjct: 386 ALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYL--- 442
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I F S LVD+YS C L A ++F+ S ++ +W+++
Sbjct: 443 --------IRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIIS----LKDKDIIIWSAI 490
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN-----FNSRFALQV 343
I+ Y + + A+ L + + SG+ + TFTS L AC L+N FN F L+
Sbjct: 491 IAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFN--FMLKQ 548
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
H +I +D+ + +IDL R G + A L +P + W L+ C H
Sbjct: 549 HQII----SHVDHY--TCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIH 600
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 269/490 (54%), Gaps = 28/490 (5%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+S GKQ+H+ G + L+++Y K GE+ +ALF+ MP R+++S
Sbjct: 85 VSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMS------- 137
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ ++ Y L A+ LFD+ NVA WN+M++G E NE
Sbjct: 138 --------CNIMIKAYLGMGNLESAKNLFDEMPD------RNVATWNAMVTGLTKFEMNE 183
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ L S ++ D Y+ S L+ C +L + QVH ++ G+E + +VG +
Sbjct: 184 EALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLA--GQQVHAYVMKCGFECNLVVGCS 241
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL--NSLAYLLFRDMINSNQD 419
L +Y + G++ + + +P +VAW+ L+ G + G L M D
Sbjct: 242 LAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPD 301
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
F+ SV+ CS LA L +GKQ+HA VK G E ++SL+ MY +CG + D +
Sbjct: 302 KITFV--SVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKT 359
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F ERDVV W+ +I G +G+ +EAI F EM Q L NEITFL +L AC H GL
Sbjct: 360 FLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLK 419
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
++ +F M +YGL+ L+HY C+VDLLG++GC ++AE +I MP K D IW ++L
Sbjct: 420 DKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLS 479
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKK 658
AC+ H N ++ +A+++L P+D + YV+L+N+Y++ W ++S+VR+A K K+ +K+
Sbjct: 480 ACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKE 539
Query: 659 AGMSWIEVSS 668
G+SW+EV +
Sbjct: 540 PGISWVEVKN 549
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 178/473 (37%), Gaps = 146/473 (30%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +S+ GK LH I G S D F N+LL++Y+ F L A LFD M R+NI
Sbjct: 76 LQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNI 135
Query: 70 VS-------------------------------WTTMVTAYTSNKRPNWAIRLYNHMLEY 98
+S W MVT T + A+ L++ M E
Sbjct: 136 MSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNEL 195
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
S P+ + +VL+ C+ G L G+ +H + + E + V+ +L MY+K GS+
Sbjct: 196 -SFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHD 254
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
++ NW ++ WN+++SG
Sbjct: 255 G--ERVINWMPDC--SLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVIS 310
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
GKQ+HA VK G E ++SL+ MY +CG + D + F ERDVV
Sbjct: 311 SCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVL 370
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W+ +I +AYG
Sbjct: 371 WSSMI---------------------------------------AAYG------------ 379
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL----IVTS 350
+ Q EEAI L + + + + TF S L AC S L+ GL ++
Sbjct: 380 -FHGQGEEAIKLFNEMEQENLPGNEITFLSLLYAC-------SHCGLKDKGLGLFDMMVK 431
Query: 351 GYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
Y L + + L+DL R G ++ A + +P K D + W L+ C H
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIH 484
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 32/194 (16%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ S++L+ C L S+ GKQ+H+ G + L+++Y K GE+ +ALF M
Sbjct: 71 LFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRM 130
Query: 484 PERDVVS-------------------------------WTGIIVGCGQNGRAKEAIAYFQ 512
P R+++S W ++ G + +EA+ F
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFS 190
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M + P+E + VL C H G + + + + G E +L + + +A
Sbjct: 191 RMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVM-KCGFECNLVVGCSLAHMYMKA 249
Query: 573 GCFDDAEQLIAEMP 586
G D E++I MP
Sbjct: 250 GSMHDGERVINWMP 263
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V + C + + QGK +H +K G S ++ ++L+SMY+ L D+ K F E
Sbjct: 305 FVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECK 364
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V W++M+ AY + + AI+L+N M E ++ N + ++L ACS G D G
Sbjct: 365 ERDVVLWSSMIAAYGFHGQGEEAIKLFNEM-EQENLPGNEITFLSLLYACSHCGLKDKGL 423
Query: 126 LIHERITRE-----KLEYDTVLMNTL 146
+ + + ++ +L++ T L++ L
Sbjct: 424 GLFDMMVKKYGLKARLQHYTCLVDLL 449
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 350/682 (51%), Gaps = 45/682 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA----------DFTSLNDAHK 59
L+ C + +++K GK++HC +I+ + N+L++MY D + K
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRK 173
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M RKN+V+W T+++ Y R A R + M+ ++P+ + V A + S
Sbjct: 174 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRM-EIKPSPVSFVNVFPAVATSR 232
Query: 120 DLDLGRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV 175
+ + + + + EY D ++++ + MY + G L +R++FD + N+
Sbjct: 233 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFD------SCVERNI 286
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV--- 232
+WN+M+ G V C+ E ++ L ++ + E+ LA + V
Sbjct: 287 EVWNTMI--GVYVQNDCL---VESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELG 341
Query: 233 VSWTGIIVGCF-ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ G + F E +++L+ MYS C + +K F + S +V WN+MI
Sbjct: 342 RQFHGFVSKNFRELPIVIINSLMVMYSRCGFV---QKSFGVFHSMRER---DVVSWNTMI 395
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
S +V N ++E + L+ + G ID T T+ L A NL N Q HG ++ G
Sbjct: 396 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN--KEIGKQTHGFLIRQG 453
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
+ + + S LID+YA+ G ++ + +LF ++D W+ +I G T++G +L+
Sbjct: 454 IQFEGM-NSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLV 512
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
FR M+ N N ++S+L CS + S+ GKQ+H F +++ ++ ++L+DMY K
Sbjct: 513 FRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 572
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
G I +F ER+ V++T +I+G GQ+G + AI+ F M + +KP+ I F+ V
Sbjct: 573 AGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAV 632
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC ++GLV+E IF M+ Y ++P EHY C+ D+LG+ G ++A + + + +
Sbjct: 633 LSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 692
Query: 590 D-KTIWASMLKACETHNNTKLVSIIAEQLLATSP-EDPSKY-VMLSNVYATLGMWDSLSK 646
+ +W S+L +C H +L ++E+L ++ S Y V+LSN+YA W S+ +
Sbjct: 693 NIAELWGSLLGSCRLHGELELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDR 752
Query: 647 VRKAGKKLG-EKKAGMSWIEVS 667
VRK ++ G +K+ G S IEV+
Sbjct: 753 VRKGMREKGLKKEVGRSGIEVA 774
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/601 (25%), Positives = 277/601 (46%), Gaps = 49/601 (8%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKAC 115
A +LFD + + V W T++ + N P+ A+ Y+ M + + + YS+ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKAC 117
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC----GS--------LTRKLFDQ 163
+ + +L G+ +H + R V+ N+L++MYV C GS + RK+FD
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDN 177
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDV-TLTSLIDMYLKCGEIDDGLA 222
NV WN+++S + VK G E ++ M +K + +
Sbjct: 178 MRR------KNVVAWNTLIS-------WYVKTGRNAEACRQFAIMMRMEIKPSPV-SFVN 223
Query: 223 LFNFMPERDVVSWTGIIVGC-------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+F + + + G + F +S+ + MY+ L +R++FD
Sbjct: 224 VFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFD---- 279
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSALKACINLLN 334
+ N+ +WN+MI YV N+ E+I L L I S + D TF A A L
Sbjct: 280 --SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQ 337
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
Q HG + + EL ++ ++L+ +Y+R G V+ + +FH + ++DVV+W+ +I
Sbjct: 338 V--ELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMI 395
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
++GL+ +L +M ++ ++++L S L + GKQ H F +++G +
Sbjct: 396 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQ 455
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E + + LIDMY K G I LF+ ERD +W +I G QNG +E F+
Sbjct: 456 FEGMN-SYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFR 514
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
+M++ ++PN +T +L AC G V+ + +Y L+ ++ +VD+ +A
Sbjct: 515 KMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKA 573
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI-IAEQLLATSPEDPSKYVML 631
G AE + ++ + T +L + + +S+ ++ Q L P+ + +L
Sbjct: 574 GAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVL 633
Query: 632 S 632
S
Sbjct: 634 S 634
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ--DVNQFIISS 427
GN + A +LF +PK V W+ +I+G + L A L + M + + + SS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY----------LKCGEIDDGL 477
LK C+ +L+ GK VH ++ + SL++MY L C E D
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M ++VV+W +I + GR EA F M++ +KP+ ++F+ V A +
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232
Query: 538 LVEEAWTIFTSM 549
+++A + M
Sbjct: 233 SIKKANVFYGLM 244
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C Q S+ GK LH I+ L Q++F + L+ MY+ ++ A +F +
Sbjct: 528 VASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTK 587
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N V++TTM+ Y + AI L+ M E G ++P+ + AVL ACS SG +D G
Sbjct: 588 ERNSVTYTTMILGYGQHGMGERAISLFLSMQELG-IKPDAIAFVAVLSACSYSGLVDEGL 646
Query: 126 LIHE 129
I E
Sbjct: 647 KIFE 650
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 256/507 (50%), Gaps = 55/507 (10%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G ++ +SL+ YL+ G D ++ + MP R VV W SAL+
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGW---------------SALIA 94
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+++ A L ++ S NV WN ++SG + + +A+ L +H G
Sbjct: 95 AHASHGDAEGAWGLLERMRSDGVEP--NVITWNGLVSGLNRSGRARDAVLALVRMHGEGF 152
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG----- 370
D+ + AL A ++ + Q+HG +V +G LD V + LID+Y + G
Sbjct: 153 LPDATGVSCALSAVGDVGDVA--VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEI 210
Query: 371 --------------------------NVKSALELFHRLPKK----DVVAWSGLIMGCTKH 400
V AL LF + +VV+W+ ++ C ++
Sbjct: 211 VRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQN 270
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
G + A LFR+M + + N I VL + +A+L G+ H F +++GF +
Sbjct: 271 GRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVG 330
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
++L+DMY KCG + D +F+ MP R+VVSW +I G +G A+ A+ F+ M S+ K
Sbjct: 331 SALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEK 390
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
P+ +TF VL AC AG EE + F M+ ++G+ P +EHY CMV LLG+AG DDA
Sbjct: 391 PDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYD 450
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+I +MPF+PD IW S+L +C H N L + AE L PE+ YV+LSN+YA+ M
Sbjct: 451 IINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKM 510
Query: 641 WDSLSKVRKAGKKLG-EKKAGMSWIEV 666
WD ++++R K +G +K+ G SWIE+
Sbjct: 511 WDGVNRLRDMMKTVGLKKEKGCSWIEI 537
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 207/491 (42%), Gaps = 50/491 (10%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G+S+D F ++LL Y F + DA + D M + +V W+ ++ A+ S+ A L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M G VEPN ++ ++ + SG L R+ E D ++ L
Sbjct: 110 ERMRSDG-VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALS---- 164
Query: 153 CGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
A G+VA+ G+Q+H + VK G + T+LIDMY
Sbjct: 165 ---------------AVGDVGDVAV-------GEQLHGYVVKAGCRLDACVATALIDMYG 202
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KCG D+ + +F+ DV S ++ G + N V EA +LF +
Sbjct: 203 KCGRADEIVRVFDESSHMDVASCNALVAG--------------LSRNAQV-SEALRLFRE 247
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ NV W S+++ V N ++ EA+ L + S G+ +S T L A N+
Sbjct: 248 FVGRGIEL--NVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANI 305
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
H + G+ D VGS L+D+YA+ G V+ A +F +P ++VV+W+
Sbjct: 306 AAL--MHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNA 363
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHAFCVKR 451
+I G HG A LFR M +S + + + VL CS G+ + K
Sbjct: 364 MIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKH 423
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAY 510
G ++ + + G++DD + MP E D W ++ C +G A
Sbjct: 424 GISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVA 483
Query: 511 FQEMIQSRLKP 521
+ + Q L+P
Sbjct: 484 AENLFQ--LEP 492
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 108/270 (40%), Gaps = 49/270 (18%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK- 67
AL G + G+ LH ++K G D L+ MY ++ ++FDE +
Sbjct: 162 ALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMD 221
Query: 68 ----------------------------------NIVSWTTMVTAYTSNKRPNWAIRLYN 93
N+VSWT++V N R A+ L+
Sbjct: 222 VASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFR 281
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC 153
M G +EPN VL A + L GR H R+ +D + + L+DMY KC
Sbjct: 282 EMQSEG-IEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKC 340
Query: 154 GSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGF----EKED-VTL 204
G ++ D + A Y NV WN+M+ G G+ +A + R EK D VT
Sbjct: 341 G----RVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTF 396
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
T ++ + G ++G + FN M + +S
Sbjct: 397 TCVLGACSQAGWTEEGRSYFNEMQHKHGIS 426
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 187/660 (28%), Positives = 305/660 (46%), Gaps = 68/660 (10%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
++LH R++ +GL + + LLS YA L A ++ DE + ++ + + +
Sbjct: 45 RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAA 104
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMY-SAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
R A+ ++ M E + S LKA S D GR +H + + D
Sbjct: 105 GRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLF 163
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
+MN L+DMY K G L RK+FD+ + NV W SMLSG C++ G K
Sbjct: 164 VMNNLVDMYAKGGDLKNARKVFDRIPDR------NVVSWTSMLSG-------CLQNGLAK 210
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV----SWTGIIVGC------------- 242
E GL LFN M + ++ + +++ C
Sbjct: 211 E-------------------GLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIH 251
Query: 243 -------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+ F +A++DMY C +AR++FD+ S + ++ LW +MI GY
Sbjct: 252 GSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELS------FVDLVLWTTMIVGYT 305
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N +A+ L + +S T + L A L N + +HG+ V G +
Sbjct: 306 QNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLS--LGRSIHGISVKLGAVEN 363
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+V + L+D+YA+ + A +F R+ KDVV W+ LI G ++ + S A +LF M
Sbjct: 364 DVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRV 423
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ + + L C CL L GK H + VK F T+L+++Y KC ++
Sbjct: 424 QGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPS 483
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M +R+ V+W +I G G G + +I F EM++ ++PNE F +LS C H
Sbjct: 484 AQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSH 543
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
G+V F SM + + P ++HY CMVD+L +AG ++A + I +MP + D +IW
Sbjct: 544 TGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQ 603
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
+ L C+ H+ + +++ P+ P VM+SN+Y + G WD +RK K+ G
Sbjct: 604 AFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERG 663
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 233/555 (41%), Gaps = 121/555 (21%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ + G+ LHC ++K G D+F NNL+ MYA L +A K+FD + +N
Sbjct: 134 ALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRN 192
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT+M++ N + L+N M + S+ P+ + ++VL AC++ G L GRLIH
Sbjct: 193 VVSWTSMLSGCLQNGLAKEGLVLFNEMRQE-SILPSEYTMASVLMACTMLGSLHQGRLIH 251
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + L + + +LDMYVKCG R++FD+ S + ++ LW +M+ G
Sbjct: 252 GSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELS------FVDLVLWTTMIVGYT 305
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ +H VK G + DV
Sbjct: 306 QNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDV 365
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+ +L+DMY KC + D +F + +DVV+W +I G
Sbjct: 366 VMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAG--------------------- 404
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
Y N+ +A+ L SH+ G D+ +
Sbjct: 405 -------------------------------YAENDMGSDALMLFSHMRVQGSLPDAISV 433
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+AL AC+ L + H V + + V + L++LY + ++ SA +F +
Sbjct: 434 VNALSACVCLGDL--LIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEM 491
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
++ V W +I G G ++ + LF +M+ N N+ + +S+L CS + GK
Sbjct: 492 NDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGK 551
Query: 443 Q-----VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIV 496
+ H F + + ++D+ + G +++ L + MP + D W +
Sbjct: 552 KCFESMAHYFNITPSMKH----YACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLH 607
Query: 497 GCGQNGR---AKEAI 508
GC + R A+EA+
Sbjct: 608 GCKLHSRLEFAEEAV 622
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 212/501 (42%), Gaps = 75/501 (14%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C S+ QG+ +H ++K+GL + F +L MY DA ++FDE++
Sbjct: 231 MASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELS 290
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++V WTTM+ YT N P A+ L+ ++ + PN + VL A + +L LGR
Sbjct: 291 FVDLVLWTTMIVGYTQNGSPLDALLLFVDD-KFMRIVPNSVTIATVLSASAQLRNLSLGR 349
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS 183
IH + + V+MN L+DMY KC +L+ + +F + N +V WNS+++
Sbjct: 350 SIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLN------KDVVTWNSLIA 403
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G+ + D+ +L+ M ++ G + D +++ N + V +++
Sbjct: 404 ------------GYAENDMGSDALMLFSHMRVQ-GSLPDAISVVNALSA--CVCLGDLLI 448
Query: 241 G-CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN---VALWNSMISGYVL 296
G CF + + ++Y N +L K D S+ + N W +MI GY +
Sbjct: 449 GKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGM 508
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSR-FALQVHGLIVTSGYE 353
+ +I L + + + + FTS L C ++ + F H +T +
Sbjct: 509 QGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMK 568
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
Y + ++D+ AR GN++ ALE ++P + D W + GC H A
Sbjct: 569 -HY---ACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFA------ 618
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ VN+ ++ FCV + ++Y G
Sbjct: 619 ----EEAVNRMMVLH--------------PDTPDFCVM------------MSNLYTSYGR 648
Query: 473 IDDGLALFKFMPERDVVSWTG 493
D LA+ K M ER +V G
Sbjct: 649 WDKSLAIRKLMKERGLVKLPG 669
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V AL C + GK H +K+ +I+ LL++Y L A ++F
Sbjct: 429 DAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVF 488
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM +N V+W M+ Y +I L+N ML+ +++PN +++++L CS +G +
Sbjct: 489 SEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLK-DNIQPNEAVFTSILSTCSHTGMV 547
Query: 122 DLGRLIHE------RITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGN 174
+G+ E IT Y ++D+ + G+L L F Q A +
Sbjct: 548 TVGKKCFESMAHYFNITPSMKHY-----ACMVDVLARAGNLEEALEFIQKMPMQA----D 598
Query: 175 VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI------------DMYLKCGEIDDGLA 222
++W + L G K +H+ + F +E V ++ ++Y G D LA
Sbjct: 599 TSIWQAFLHGCK-LHS---RLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLA 654
Query: 223 LFNFMPERDVVSWTG 237
+ M ER +V G
Sbjct: 655 IRKLMKERGLVKLPG 669
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 202/696 (29%), Positives = 324/696 (46%), Gaps = 109/696 (15%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS+K G H R IK G + I T N L+ +Y+ +N+A KLFDEM ++N SW T++
Sbjct: 2 RSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTII 61
Query: 77 TAYTSNKRPNWAIRL-----------YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+A+ ++ A + YN ML G V +G+ +A L
Sbjct: 62 SAHIKSQNLAQAKSIFDSASVRDLVTYNSMLS-GYVSVDGYERNA------------LEL 108
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ + R ++E D + + ++++++ K L NS G
Sbjct: 109 FVEMQSIRNEIEIDDLTITSMVNLFSK------------------------LCNSCY--G 142
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+Q+H++ VK G ++ ++SLIDMY KCG + +F GC
Sbjct: 143 RQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQVFK---------------GCERE 187
Query: 246 SCFTL---SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F L +A+V Y + A +LF W S + WN++ISGYV N E
Sbjct: 188 GGFDLVSKNAMVAAYCREGDMEMALRLF-----WRESELNDSVSWNTLISGYVQNGYPVE 242
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + +G+ + +TF S L AC +L N + ++H I+ +G V S +
Sbjct: 243 ALKLFVCMGENGVKWNEHTFGSVLSACADLRNL--KIGKEMHAWILKNGLGSSAFVESGI 300
Query: 363 IDLYARLGNVK-------------------------------SALELFHRLPKKDVVAWS 391
+D+Y + GN+K A LF L +K+ + W+
Sbjct: 301 VDVYCKCGNMKYAESLLLTRGVRSSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWA 360
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
L G K + L R+ I + + I+ S VC+ A+L GKQ+H + +
Sbjct: 361 ALFSGYVKLKQCEAFFELLREYIAKEAAIPDALILISAFNVCAFQAALGPGKQIHGYVFR 420
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G E + T T++IDMY KCG I LF + ERD+V + ++ G +G +AI
Sbjct: 421 MGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAINL 480
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
FQEM++ + P+ +TF+ +LSACRH GLV+ F SM +Y + P +HY CM+DL G
Sbjct: 481 FQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYG 540
Query: 571 QAGCFDDAEQLIAEMPFK-PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
+A + + +P + D + + AC +NNT+L E+LL + ++YV
Sbjct: 541 RASQLEKMVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYV 600
Query: 630 MLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWI 664
L+NVYA G W + ++R+ + K +K AG SW+
Sbjct: 601 QLANVYAAEGNWAEMGRIRREMRGKEAKKFAGCSWV 636
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 48/262 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-----------GN---------------- 42
L C R++K GK +H I+K GL F GN
Sbjct: 266 LSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMKYAESLLLTRGVRSS 325
Query: 43 -NLLSMYADFTS---LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
++ SM F+S + +A +LFD + KN + W + + Y K+ L +
Sbjct: 326 FSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLKQCEAFFELLREYIAK 385
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
+ P+ + + C+ L G+ IH + R +E D ++DMY KCGS+
Sbjct: 386 EAAIPDALILISAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSIPY 445
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-----CVKRGFEKEDVTLTSL 207
KLF + ++ L+N ML+G G ++ A ++RG + VT +L
Sbjct: 446 AEKLFLKVIER------DLVLYNVMLAGYAHHGHEIKAINLFQEMLERGVGPDAVTFVAL 499
Query: 208 IDMYLKCGEIDDGLALFNFMPE 229
+ G +D G F M E
Sbjct: 500 LSACRHRGLVDLGEKTFYSMTE 521
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ A C + ++ GK +H + + G+ D+ T ++ MY+ S+ A KLF ++
Sbjct: 395 LISAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVI 454
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V + M+ Y + AI L+ MLE G V P+ + A+L AC G +DLG
Sbjct: 455 ERDLVLYNVMLAGYAHHGHEIKAINLFQEMLERG-VGPDAVTFVALLSACRHRGLVDLGE 513
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTR 158
+T + + +T ++D+Y + L +
Sbjct: 514 KTFYSMTEDYHILPETDHYACMIDLYGRASQLEK 547
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ SL+ G H +K GF +T L+ +Y K I++ LF MP+R+ SW I
Sbjct: 1 MRSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTI 60
Query: 495 I 495
I
Sbjct: 61 I 61
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 311/594 (52%), Gaps = 47/594 (7%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AIR+ N + +Y+++L+ C+ G H + + LE D + N+LL
Sbjct: 45 AIRILNST-HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 148 DMYVKCGS---LTRKLFD-QYSNWAASAYGNVALWNSMLSG---GKQ------VHAFCVK 194
+Y K G TR++FD ++ A S W SM+SG GK+ V V
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAIS-------WTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G + + TL+S + + GE+ G +I FE + F S L
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGV-----------VITHGFEWNHFISSTLA 205
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH-SS 313
+Y +AR++FD+ +V W +++S + N+ EEA+ L +H
Sbjct: 206 YLYGVNREPVDARRVFDEMPE------PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ D TF + L AC NL ++HG ++T+G + +V S+L+D+Y + G+V+
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQ--GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A ++F+ + KK+ V+WS L+ G ++G + A +FR+M ++ + + +VLK C+
Sbjct: 318 EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACA 373
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
LA++R GK++H V+RG I ++LID+Y K G ID ++ M R++++W
Sbjct: 374 GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNA 433
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
++ QNGR +EA+++F +M++ +KP+ I+F+ +L+AC H G+V+E F M Y
Sbjct: 434 MLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSY 493
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSI 612
G++P EHY CM+DLLG+AG F++AE L+ + D ++W +L C + + +++
Sbjct: 494 GIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAER 553
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
IA++++ P+ YV+LSN+Y +G +RK + G K G SWI+
Sbjct: 554 IAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q EAI +L+ HSS + + S L+ C + +F +Q H +V SG E D V
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSF--IHGIQFHAHVVKSGLETDRNV 98
Query: 359 GSNLIDLYARLG-NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
G++L+ LY +LG ++ +F KD ++W+ ++ G + A +F +M++
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
D N+F +SS +K CS L +R G+ H + GFE ++L +Y E D
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSACRHA 536
+F MPE DV+ WT ++ +N +EA+ F M + + L P+ TF VL+AC +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
+++ I + G+ ++ ++D+ G+ G +A Q+ M K + W++
Sbjct: 279 RRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSA 336
Query: 597 MLKA-CETHNNTKLVSIIAE 615
+L C+ + K + I E
Sbjct: 337 LLGGYCQNGEHEKAIEIFRE 356
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 200/486 (41%), Gaps = 108/486 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEMARKN 68
L+ C + S G H ++K GL D GN+LLS+Y + + ++FD K+
Sbjct: 68 LQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKD 127
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SWT+M++ Y + K A+ ++ M+ +G ++ N F S+ +KACS G++ LGR H
Sbjct: 128 AISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 129 ERITREKLEYDTVLMNTLLDMYV--KCGSLTRKLFDQYSN-----WAA--SAYGN----- 174
+ E++ + +TL +Y + R++FD+ W A SA+
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 175 --VALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ +M G GK++H + G V +SL
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 306
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-----------------------CF- 243
+DMY KCG + + +FN M +++ VSW+ ++ G CF
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFG 366
Query: 244 ----ECS-------------------CF----TLSALVDMYSNCNVLCEARKLFDQYSSW 276
C+ CF SAL+D+Y + A +++ + S
Sbjct: 367 TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-- 424
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LL 333
N+ WN+M+S N + EEA++ + + G+ D +F + L AC + +
Sbjct: 425 ----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ F L + G E Y S +IDL R G + A L R + D W
Sbjct: 481 EGRNYFVLMAKSYGIKPGTE-HY---SCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 393 LIMGCT 398
L+ C
Sbjct: 537 LLGPCA 542
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 219/771 (28%), Positives = 347/771 (45%), Gaps = 126/771 (16%)
Query: 9 ALRHCGQR--RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD-FTSLNDAHKLFDEMA 65
ALR C + K G +H I K D+ N L+SMY S NDA +FD +
Sbjct: 178 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIG 237
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG---SVEPNGFMY-SAVLKACSLSGDL 121
+N +SW ++++ Y+ A L++ M + G S +PN + + S + ACS +
Sbjct: 238 IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACS---SV 294
Query: 122 DLGRLIHE----RITREKLEYD-------------------------------TVLMNTL 146
D G + E R+ + D V MN L
Sbjct: 295 DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGL 354
Query: 147 LDMYVKC--GSLTRKLFDQYSNWAA----------SAYGNVALWNSMLSGGKQVHAFCVK 194
+ VK G K+F + + SA+ ++ G++VHA ++
Sbjct: 355 MVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 414
Query: 195 RGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC------ 247
G V + L++MY K G I D ++F M E+D VSW +I G + C
Sbjct: 415 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 474
Query: 248 --------------FTL-----------------------------------SALVDMYS 258
FTL +AL+ +Y+
Sbjct: 475 SFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYA 534
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCI 317
E K+F Y V+ WNS+I +E + +A+ + G +
Sbjct: 535 ETGCFTECLKVFS-----LMPEYDQVS-WNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 588
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
TF + L A ++ L+ + + Q+H L++ D +G+ L+ Y + G + +
Sbjct: 589 SRVTFINILSA-VSSLSLH-EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEK 646
Query: 378 LFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F R+ + +D V+W+ +I G + L A L M+ Q ++ F +++L C+ +A
Sbjct: 647 IFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVA 706
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+L RG +VHA ++ E + + ++L+DMY KCG ID F+ MP R+V SW +I
Sbjct: 707 TLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMIS 766
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G ++G ++A+ F M+ P+ +TF+GVLSAC H G VEE + F SM Y L
Sbjct: 767 GYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLS 826
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKLVSIIA 614
P +EH+ CMVDLLG+AG D+ I MP KP+ IW ++L AC N NT+L A
Sbjct: 827 PRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAA 886
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
E LL P++ YV+L+N+YA+ W+ ++K R A K+ KK AG SW+
Sbjct: 887 EMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWV 937
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/600 (26%), Positives = 280/600 (46%), Gaps = 44/600 (7%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
++ + LH + IKYG ++F N L+++Y L A KLFDEM+ +N+V+W +++ Y
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHERITREKLE 137
T N +P+ A + M+ G + PN + + + L+AC SG LG IH I++ +
Sbjct: 148 TQNGKPDEACARFRDMVRAGFI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206
Query: 138 YDTVLMNTLLDMYVKC---GSLTRKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHA 190
D V+ N L+ MY C + R +FD N WNS++S G V A
Sbjct: 207 SDVVVCNVLISMYGSCLDSANDARSVFD------GIGIRNSISWNSIISVYSRRGDAVSA 260
Query: 191 FCVKRGFEKE---------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ + +KE + T SLI C +D GL + M R V +G
Sbjct: 261 YDLFSSMQKEGLGFSFKPNEYTFGSLITT--ACSSVDFGLCVLEQMLAR--VEKSG---- 312
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
F + SALV ++ + +A+ +F+Q NV N ++ G V +Q E
Sbjct: 313 -FLQDLYVSSALVSGFARFGLTDDAKNIFEQM------GVRNVVSMNGLMVGLVKQKQGE 365
Query: 302 EAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VG 359
A + + G+ DSY + + ++L R +VH ++ +G + + +G
Sbjct: 366 AAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 425
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+++YA+ G + A +F + +KD V+W+ LI G ++ + A F M +
Sbjct: 426 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM 485
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F + S L C+ L + G+Q+H +K G + + +L+ +Y + G + L +
Sbjct: 486 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 545
Query: 480 FKFMPERDVVSWTGIIVGCGQN-GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F MPE D VSW +I + +A+ YF +M++ + +TF+ +LSA L
Sbjct: 546 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 605
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E + I ++ +Y L ++ G+ G ++ E++ A M D+ W SM+
Sbjct: 606 HEVSHQIH-ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 664
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 163/444 (36%), Gaps = 111/444 (25%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C I G+ +HC +K GL D+ N LL++YA+ + K+F M
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550
Query: 66 RKNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ VSW +++ A + S + A++ + M+ G + + +L A S ++
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR-GGWGLSRVTFINILSAVSSLSLHEVS 609
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML 182
IH + + L DT + N LL Y KCG + K+F + S + WNSM+
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETR-----DEVSWNSMI 664
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG G +VHA ++ E
Sbjct: 665 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 724
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ V ++L+DMY KCG ID F MP R+V SW +I G
Sbjct: 725 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG----------------- 767
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
Y + E+A+ L + + G D
Sbjct: 768 -----------------------------------YARHGHGEKALKLFTRMMLDGQPPD 792
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSAL 376
TF L AC ++ F H ++ Y L V S ++DL R G +
Sbjct: 793 HVTFVGVLSACSHVGFVEEGFE---HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 849
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTK 399
+ + +P K +V+ W ++ C +
Sbjct: 850 DFINSMPMKPNVLIWRTVLGACCR 873
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
S A ++H + G+ + + + LI++Y R+G++ SA +LF + +++V W+ LI G
Sbjct: 87 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--SCLASLRRGKQVHAFCVKRGFE 454
T++G A FRDM+ + N + S L+ C S + + G Q+H K +
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206
Query: 455 KEDITLTSLIDMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + LI MY C +D ++F + R+ +SW II + G A A F
Sbjct: 207 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 266
Query: 514 MIQSRL----KPNEITFLGVL-SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY---CM 565
M + L KPNE TF ++ +AC V+ + M L+ Y +
Sbjct: 267 MQKEGLGFSFKPNEYTFGSLITTACSS---VDFGLCVLEQMLARVEKSGFLQDLYVSSAL 323
Query: 566 VDLLGQAGCFDDAEQLIAEM 585
V + G DDA+ + +M
Sbjct: 324 VSGFARFGLTDDAKNIFEQM 343
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 328/677 (48%), Gaps = 83/677 (12%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ G SLH K GL + + +S+Y+ + A K+FDE+ ++++V+WT ++
Sbjct: 122 LPHGASLHALASKTGL---FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIG 178
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVE----PNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+ N P +R H+ +G VE PN + AC G + G +H + +
Sbjct: 179 HVHNGEPEKGLRCLRHV--HGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKN 236
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
+ + + +++LDMY KCG + R+ + +FC
Sbjct: 237 GVA--SFIQSSVLDMYSKCG-VPREAY---------------------------RSFC-- 264
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-----------F 243
K+ + TS+I +Y + G + + L LF M E ++ G++VGC F
Sbjct: 265 EVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRP-DGVVVGCVLSGFGNSMDVF 323
Query: 244 ECSCF--------------TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
+ F +L+ MY +L A ++F G+ WN
Sbjct: 324 QGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPL-------CQGSGDGWNF 376
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
M+ GY +N + + L + G+ ++ SA+ +C L N +H ++
Sbjct: 377 MVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVN--LGRSIHCNVIK 434
Query: 350 SGYELDYI-VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ I V ++L+++Y + G + A +F+ + DVV+W+ LI + A
Sbjct: 435 GFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNT-SETDVVSWNTLISSHVHIKQHEEAVN 493
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M+ +Q N + VL CS LASL +G++VH + + GF T+LIDMY
Sbjct: 494 LFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYA 553
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG++ +F M E+DV+ W +I G G NG A+ A+ FQ M +S + PN ITFL
Sbjct: 554 KCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLS 613
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+LSAC HAGLVEE +F MK Y + P+L+HY CMVDLLG+ G +AE ++ MP
Sbjct: 614 LLSACAHAGLVEEGKYMFARMK-SYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPIS 672
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
PD +W ++L C+THN ++ IA+ + PE+ Y++++N+Y+ +G W+ VR
Sbjct: 673 PDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEAENVR 732
Query: 649 KAGKK---LGEKKAGMS 662
+ K+ +G KKAG S
Sbjct: 733 RTMKERCSMG-KKAGWS 748
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 197/478 (41%), Gaps = 72/478 (15%)
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
++L G +HA K G + SL Y +CG ++ +F+ +P+RDVV+WT +I
Sbjct: 120 TLLPHGASLHALASKTGLFHSSASFVSL---YSRCGRMELARKVFDEIPKRDVVAWTALI 176
Query: 240 V----------------------------------GCF----------ECSC-------- 247
+ G F E SC
Sbjct: 177 IGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKN 236
Query: 248 ----FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
F S+++DMYS C V EA Y S+ + ++ W S+I Y E
Sbjct: 237 GVASFIQSSVLDMYSKCGVPREA------YRSFCEVIHKDLLCWTSVIGVYARIGMMGEC 290
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + + + D L N ++ A HG+I+ Y D V +L+
Sbjct: 291 LRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAF--HGVIIRRYYVDDEKVNDSLL 348
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+Y + G + A +F L + W+ ++ G K G N LFR+M
Sbjct: 349 FMYCKFGMLSLAERIF-PLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETI 407
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKF 482
I+S + C+ L ++ G+ +H +K + ++I++T SL++MY KCG++ +F
Sbjct: 408 GIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFN- 466
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
E DVVSW +I + +EA+ F +M++ KPN T + VLSAC H +E+
Sbjct: 467 TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKG 526
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ + E G +L ++D+ + G + + M + D W +M+
Sbjct: 527 ERVHCYIN-ESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSM-MEKDVICWNAMISG 582
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 199/494 (40%), Gaps = 128/494 (25%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG ++ +G LH ++K G++ F +++L MY+ +A++ F E+ K+++ W
Sbjct: 217 CGNLGAVSEGSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCW 274
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ Y +RL+ M E + P+G + VL S D+ G+ H I
Sbjct: 275 TSVIGVYARIGMMGECLRLFREMQE-NEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVII 333
Query: 133 REKLEYDTVLMNTLLDMYVKCG--SLTRKLFD--QYS----NWAASAYGNVA-------L 177
R D + ++LL MY K G SL ++F Q S N+ YG V L
Sbjct: 334 RRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSGDGWNFMVFGYGKVGENVKCVEL 393
Query: 178 WNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLT-SLIDMYL 212
+ M ++ G+ +H +K + +++++T SL++MY
Sbjct: 394 FREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYG 453
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGII--------------------------------- 239
KCG++ +FN E DVVSW +I
Sbjct: 454 KCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVV 512
Query: 240 ----------------VGCF-ECSCFTL-----SALVDMYSNCNVLCEARKLFDQYSSWA 277
V C+ S FTL +AL+DMY+ C L ++R +FD
Sbjct: 513 VLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMME-- 570
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+V WN+MISGY +N E A+ + H+ S + + TF S L AC +
Sbjct: 571 ----KDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHA----- 621
Query: 338 RFALQVHGLIVTSGYEL----DYIVGSNL------IDLYARLGNVKSALELFHRLP-KKD 386
GL+ Y Y V NL +DL R GNV+ A + +P D
Sbjct: 622 -------GLVEEGKYMFARMKSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPD 674
Query: 387 VVAWSGLIMGCTKH 400
W L+ C H
Sbjct: 675 GGVWGALLGHCKTH 688
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 7/206 (3%)
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE-LFHRLPKKDVVAWSGLIMGCTK 399
L+ H L VTSG+ + + S LI LY L N S+ LFH LP KD ++ +
Sbjct: 24 LRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKSLFS 83
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
L LF M SN N F + V+ + L L G +HA K G
Sbjct: 84 RSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLFHSS-- 141
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA---IAYFQEMIQ 516
S + +Y +CG ++ +F +P+RDVV+WT +I+G NG ++ + + +++
Sbjct: 142 -ASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVE 200
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEA 542
KPN T+ G AC + G V E
Sbjct: 201 DDEKPNAKTWEGGFLACGNLGAVSEG 226
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I A+ C Q ++ G+S+HC +IK L ++I N+L+ MY + A ++F+
Sbjct: 409 IASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNT- 467
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ ++VSW T+++++ K+ A+ L++ M+ +PN VL ACS L+ G
Sbjct: 468 SETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQ-KPNTATLVVVLSACSHLASLEKG 526
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
+H I + L L+DMY KCG L +R +FD +V WN+M+
Sbjct: 527 ERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMME------KDVICWNAMI 580
Query: 183 SG----GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
SG G A + + E+ +V T SL+ G +++G +F M V
Sbjct: 581 SGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSV 639
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C S+++G+ +HC I + G + ++ G L+ MYA L + +FD M
Sbjct: 510 LVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMM 569
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++ W M++ Y N A+ ++ HM E +V PNG + ++L AC+ +G ++ G+
Sbjct: 570 EKDVICWNAMISGYGMNGYAESALEIFQHM-EESNVMPNGITFLSLLSACAHAGLVEEGK 628
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ R+ + + ++D+ + G++
Sbjct: 629 YMFARMKSYSVNPNLKHYTCMVDLLGRYGNV 659
>gi|357124385|ref|XP_003563881.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 670
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 313/657 (47%), Gaps = 22/657 (3%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + ++H +K G + NNLL Y + +A LFDEM +N+VS + ++
Sbjct: 11 RGGRHPSTVHGAAVKLGFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVLI 70
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSV----EPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+ + A L++ ML G PN F A++ C+ + D+ G +H
Sbjct: 71 SNVSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASAV 130
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFC 192
+ + D + L+DMY KCG + + +A S +V W SM++
Sbjct: 131 KFGVAGDESVAGALVDMYSKCGCVD----SSWRVFALSPQRSVVSWTSMIACLVNNDGSS 186
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN---FMPERDVVSWTGIIVGCFECSCFT 249
R + L+ ++ L +F+ +P + + +G E
Sbjct: 187 GHRDAALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGGKQIHGCLLKMGT-EVDPAL 245
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
+AL+ MY C + E KL + A S S+ Y N + EA+
Sbjct: 246 GTALIAMYGRCGGVDEIAKLSCRIRHDAFSR-------TSLFVAYARNGYSMEAVWNFRE 298
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ M ID T TS L+ C +L R A +VH + + ++LD + + I +Y R
Sbjct: 299 MVMEKMAIDQSTITSLLQVCSSLGQL--RLAEEVHCYALKTLFKLDTSLLNATITVYGRC 356
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G++ +A +F L KD+++W+ L+ ++ L L F++M+ F I+SVL
Sbjct: 357 GDIATAEIIFDLLENKDIISWTALLTCYAQNDLPQETLLFFKEMLRKGLGSPIFCITSVL 416
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
+ CS + G+Q+H+ VK G + D +L+ MY KCG + L +F M R ++
Sbjct: 417 RACSSTTNHAVGRQIHSRAVKLGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGII 476
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I Q+G AI F M + + P++ TF+G+LS+C GL+ E F M
Sbjct: 477 SWNALITSFSQHGNEVAAIQLFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQM 536
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
K Y +EP +EHY CMVDL +AG F DA + I +P +PD+ +W ++L +C TH N +L
Sbjct: 537 KALYNVEPKMEHYTCMVDLFARAGRFSDALEFIDALPCQPDQLVWEALLASCRTHGNVEL 596
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
+ A+++L PEDPS Y+ LSN++A++ MW+ + R + K AG SW++
Sbjct: 597 GRLAAKKILEIRPEDPSPYITLSNIHASVHMWEEKTWDRTVFDFQRVRKYAGSSWVD 653
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/571 (20%), Positives = 222/571 (38%), Gaps = 105/571 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + I G +H +K+G++ D L+ MY+ ++ + ++F ++++VSW
Sbjct: 113 CARASDIVAGSQVHASAVKFGVAGDESVAGALVDMYSKCGCVDSSWRVFALSPQRSVVSW 172
Query: 73 TTMVTAYTSNKRPNW---AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
T+M+ +N + A + + P +S +LK G L G+ IH
Sbjct: 173 TSMIACLVNNDGSSGHRDAALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGGKQIHG 232
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT-------RKLFDQYSN------WAASAYGNVA 176
+ + E D L L+ MY +CG + R D +S +A + Y A
Sbjct: 233 CLLKMGTEVDPALGTALIAMYGRCGGVDEIAKLSCRIRHDAFSRTSLFVAYARNGYSMEA 292
Query: 177 LWN--------------------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
+WN L ++VH + +K F+ + L + I +
Sbjct: 293 VWNFREMVMEKMAIDQSTITSLLQVCSSLGQLRLAEEVHCYALKTLFKLDTSLLNATITV 352
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
Y +CG+I +F+ + +D++SWT ++ +C
Sbjct: 353 YGRCGDIATAEIIFDLLENKDIISWTALL------TC----------------------- 383
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
Y N+ +E + + G+ + TS L+AC
Sbjct: 384 -----------------------YAQNDLPQETLLFFKEMLRKGLGSPIFCITSVLRACS 420
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+ N Q+H V G + V + L+ +YA+ G+V AL++F+ + + +++W
Sbjct: 421 S--TTNHAVGRQIHSRAVKLGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGIISW 478
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG----KQVHA 446
+ LI ++HG A LF M + + +L CS + + G KQ+ A
Sbjct: 479 NALITSFSQHGNEVAAIQLFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQMKA 538
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAK 505
E + T ++D++ + G D L +P + D + W ++ C +G +
Sbjct: 539 L---YNVEPKMEHYTCMVDLFARAGRFSDALEFIDALPCQPDQLVWEALLASCRTHGNVE 595
Query: 506 EAIAYFQEMIQSRLK-PNEITFLGVLSACRH 535
+++++ R + P+ L + A H
Sbjct: 596 LGRLAAKKILEIRPEDPSPYITLSNIHASVH 626
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
LL R VHG V G+ + +NL+ Y R A LF +P ++VV+ S
Sbjct: 8 LLLRGGRHPSTVHGAAVKLGFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCS 67
Query: 392 GLIMGCTKHGLNSLAYLLFRDMI-----NSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
LI ++ G A+LLF DM+ S N F + +++ C+ + + G QVHA
Sbjct: 68 VLISNVSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHA 127
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC-----GQN 501
VK G ++ +L+DMY KCG +D +F P+R VVSWT +I C G +
Sbjct: 128 SAVKFGVAGDESVAGALVDMYSKCGCVDSSWRVFALSPQRSVVSWTSMI-ACLVNNDGSS 186
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G A++ ++M+ ++ P TF +L GL+ I + + G E
Sbjct: 187 GHRDAALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGGKQIHGCLL-KMGTEVDPAL 245
Query: 562 YYCMVDLLGQAGCFDDAEQL 581
++ + G+ G D+ +L
Sbjct: 246 GTALIAMYGRCGGVDEIAKL 265
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I L+ C ++ + +HC +K D N +++Y + A +
Sbjct: 306 IDQSTITSLLQVCSSLGQLRLAEEVHCYALKTLFKLDTSLLNATITVYGRCGDIATAEII 365
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD + K+I+SWT ++T Y N P + + ML G P F ++VL+ACS + +
Sbjct: 366 FDLLENKDIISWTALLTCYAQNDLPQETLLFFKEMLRKGLGSPI-FCITSVLRACSSTTN 424
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALW 178
+GR IH R + ++ + N L+ MY KCGS + K+F+ + ++ AL
Sbjct: 425 HAVGRQIHSRAVKLGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGIISWN--ALI 482
Query: 179 NSMLSGGKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
S G +V A + + G +D T L+ + G I +G F M
Sbjct: 483 TSFSQHGNEVAAIQLFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQM 536
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 287/547 (52%), Gaps = 43/547 (7%)
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQV 188
L D L+ Y++ G ++ D Y + + +V WN+MLSG + V
Sbjct: 100 LRGDAFASGALVHAYLRFG----RVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAV 155
Query: 189 HAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
F V G + VT++S++ M + G+ LA+ + + + +
Sbjct: 156 GLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGL-----------DDE 204
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +A++D+Y +L E RK+FD SS ++ WNS+ISG+ Q A+ +
Sbjct: 205 LFVCNAMIDVYGKLGMLEEVRKVFDGMSSR------DLVTWNSIISGHEQGGQVASAVEM 258
Query: 307 LSHIHSSGMCIDSYTF---TSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNL 362
+ SG+ D T SA+ C ++ S VH +V G+++ D I G+ +
Sbjct: 259 FCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRS-----VHCYMVRRGWDVGDIIAGNAI 313
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN- 421
+D+YA+L +++A +F +P +D V+W+ LI G ++GL S A ++ D + ++ +
Sbjct: 314 VDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVY-DHMQKHEGLKP 372
Query: 422 -QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
Q SVL S L +L++G ++HA +K G + T +ID+Y KCG++D+ + LF
Sbjct: 373 IQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLF 432
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ P R W +I G G +G +A++ F +M Q + P+ +TF+ +L+AC HAGLV+
Sbjct: 433 EQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVD 492
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F M+ YG++P +HY CMVD+ G+AG DDA I MP KPD IW ++L A
Sbjct: 493 QGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGA 552
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H N ++ + ++ L P++ YV++SN+YA +G WD + +VR ++ +K
Sbjct: 553 CRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTP 612
Query: 660 GMSWIEV 666
G S IEV
Sbjct: 613 GWSSIEV 619
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 240/524 (45%), Gaps = 46/524 (8%)
Query: 25 LHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
LH ++ GL + D F L+ Y F + DA++ FDEM +++ +W M++ N
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
R A+ L+ M+ G V + S+VL C L GD L +H + L+ + +
Sbjct: 150 RAAEAVGLFGRMVMEG-VAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVK 194
N ++D+Y K G L RK+FD S+ ++ WNS++SG +Q V FC
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSR------DLVTWNSIISGHEQGGQVASAVEMFCGM 262
Query: 195 R--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT--GIIVGCFECSCFTL 250
R G + +TL SL +CG+I G ++ +M R W II G
Sbjct: 263 RDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRR---GWDVGDIIAG--------- 310
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+A+VDMY+ + + A+++FD A + WN++I+GY+ N EAI + H+
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVS------WNTLITGYMQNGLASEAIHVYDHM 364
Query: 311 HS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
G+ TF S L A +L ++H L + +G LD VG+ +IDLYA+
Sbjct: 365 QKHEGLKPIQGTFVSVLPAYSHLGALQQ--GTRMHALSIKTGLNLDVYVGTCVIDLYAKC 422
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A+ LF + P++ W+ +I G HG + A LF M + S+L
Sbjct: 423 GKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLL 482
Query: 430 KVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERD 487
CS + +G+ + G + ++DM+ + G++DD + MP + D
Sbjct: 483 AACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPD 542
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
W ++ C +G + Q + + L P + + ++S
Sbjct: 543 SAIWGALLGACRIHGNVEMGKVASQNLFE--LDPKNVGYYVLMS 584
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHK 59
+ L + A+ CG I G+S+HC +++ G DI GN ++ MYA + + A +
Sbjct: 272 LTLLSLASAIAQCG---DICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M ++ VSW T++T Y N + AI +Y+HM ++ ++P + +VL A S G
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLG 388
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVAL 177
L G +H + L D + ++D+Y KCG L LF+Q +
Sbjct: 389 ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP------ 442
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+++SG G A + + G + VT SL+ G +D G FN M
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMM 501
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 166/431 (38%), Gaps = 117/431 (27%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
++H +K+GL ++F N ++ +Y L + K+FD M+ +++V+W ++++ +
Sbjct: 191 AMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGG 250
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVL 142
+ A+ ++ M + G V P+ ++ A + GD+ GR +H + R + D +
Sbjct: 251 QVASAVEMFCGMRDSG-VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309
Query: 143 MNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG---------------- 184
N ++DMY K + +++FD A + WN++++G
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS------WNTLITGYMQNGLASEAIHVYDH 363
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
G ++HA +K G + T +ID+Y KCG
Sbjct: 364 MQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCG 423
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
++D+ + LF P R W +I G
Sbjct: 424 KLDEAMLLFEQTPRRSTGPWNAVISG---------------------------------- 449
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLL 333
+G+ A +A++L S + G+ D TF S L AC L+
Sbjct: 450 --VGVHGHGA----------------KALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
+ F ++ + Y + I + ++D++ R G + A + +P K D W
Sbjct: 492 DQGRNFF-----NMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546
Query: 391 SGLIMGCTKHG 401
L+ C HG
Sbjct: 547 GALLGACRIHG 557
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 320/649 (49%), Gaps = 57/649 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + GK++ RI GL D + +LS++A SL ++FD M + +
Sbjct: 308 LAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTV 367
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+WTTM+ AY A+ LY+ M +EP+ S VL+ACS +L+ GR +H
Sbjct: 368 VTWTTMIAAYNQRGYSMEALELYHCM----DIEPDDIALSNVLQACSRLKNLEQGRAVHS 423
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
RI E ++ L+DMYVKCG L R+ FD + +V W S+++
Sbjct: 424 RIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR------DVISWTSLITAYSH 477
Query: 185 ---GKQV----HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
G++ H+ ++ G E +T ++ID + + G AL + V TG
Sbjct: 478 ENFGREALEVFHSMELE-GVEPNSITFCTVIDACSRLSSLLPGRALHS------RVVATG 530
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
I F +ALV MYS + AR +FD S Y + W M+ N
Sbjct: 531 HI-----SDEFVGNALVSMYSKFGRVDFARVVFD---SIPVKRYPS---WRVMLVALTQN 579
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ EA+ + S IH G S F++AL +C L + + A +HG+I +S + D +
Sbjct: 580 GHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSR--ARAIHGVIKSSDFYPDLV 637
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+ + L+++YA+ G ++ A +F ++ +K+ V+W+ +I G ++G + A L++ M
Sbjct: 638 LSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---- 693
Query: 418 QDVNQFIISSVLKVCSC--LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
DV I+ V + SC L +L G++VHA G + ++ +T+L++MY KCG++
Sbjct: 694 -DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGL 752
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
F D +W + Q G + + ++EM ++PN IT L VL AC H
Sbjct: 753 AREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSH 812
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI--------AEMPF 587
G++EE F M ++G+ P EHY CM DLLG++G ++AE+++ +E
Sbjct: 813 MGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAAS 872
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+ W S L AC+THN+ + AE+L PED + YV+LS Y+
Sbjct: 873 PVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 921
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 175/682 (25%), Positives = 292/682 (42%), Gaps = 108/682 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYG--LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIV 70
C ++ GK++H +I + D N+L++MY SL DA ++F + RKN
Sbjct: 107 CCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAF 166
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
SWT M+TAY N AI ++ M+ G VEP+ Y+ VL ACS GDL+ G IH
Sbjct: 167 SWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHAL 226
Query: 131 ITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSN-----W----AASAY------- 172
I + +E ++ L+D+Y K G L F+ + W AA Y
Sbjct: 227 IRSKGVE-SAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFA 285
Query: 173 -------------GNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
N ++ +L+ GK + G E +DV ++ +
Sbjct: 286 LELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSL 345
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CFEC------------- 245
+ +CG + +F+ MP R VV+WT +I + C
Sbjct: 346 HARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIALSNV 405
Query: 246 ---------------------------SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
S + LVDMY C L EAR+ FD + +
Sbjct: 406 LQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR-- 463
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
+V W S+I+ Y EA+ + + G+ +S TF + + AC L +
Sbjct: 464 ----DVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPG 519
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
AL H +V +G+ D VG+ L+ +Y++ G V A +F +P K +W +++ T
Sbjct: 520 RAL--HSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALT 577
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
++G + A ++ + I S+ L C+ L + R + +H F + +
Sbjct: 578 QNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLV 637
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
L+++Y KCGE+++ +F M E++ VSWT +I G QNGR EA+ ++ M
Sbjct: 638 LSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---D 694
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PN I F+ V+S+C G + E + + + GL+ + +V++ + G A
Sbjct: 695 VQPNFIAFVPVISSCADLGALVEGQRVHARLS-DAGLQNNEVIVTALVNMYAKCGKLGLA 753
Query: 579 EQLIAEMPFKPDKTIWASMLKA 600
+ + + PD W SM A
Sbjct: 754 REFF-DSTYCPDAGAWNSMATA 774
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 254/567 (44%), Gaps = 105/567 (18%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++GK +H RI + D N LL++YA L ++ ++F+ M R+ +
Sbjct: 6 LSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTV 65
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W TM+TAY + A+ + M P+ +++VL AC DL+ G+ IH
Sbjct: 66 ATWNTMITAYVQHDFFQEALEAFRRM----DAPPSSITFTSVLGACCSPDDLETGKAIHR 121
Query: 130 RI--TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYGN---- 174
+I + +++ D +L N+L+ MY KCGSL ++F +W A +AY
Sbjct: 122 QIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYE 181
Query: 175 ---VALWNSMLSGGK-------------------------QVHAFCVKRGFEKEDVTLTS 206
+ ++ M+S G+ ++HA +G E V+ T
Sbjct: 182 RRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMVS-TG 240
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LID+Y K G +D L +F + +RDVV WT I C
Sbjct: 241 LIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAAC------------------------ 276
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
V + Q+ A+ L + + G+ ++ TF+ L
Sbjct: 277 ----------------------------VYHGQSGFALELFRKMEAEGLQANNVTFSKIL 308
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
AC NL +F + + I T G E D ++ ++ L+AR G++ E+F R+P +
Sbjct: 309 AACSNLEDFET--GKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRT 366
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VV W+ +I + G + A L+ M D+ +S+VL+ CS L +L +G+ VH+
Sbjct: 367 VVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDI---ALSNVLQACSRLKNLEQGRAVHS 423
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
R FE + T L+DMY+KCG++ + F RDV+SWT +I +E
Sbjct: 424 RIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGRE 483
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSAC 533
A+ F M ++PN ITF V+ AC
Sbjct: 484 ALEVFHSMELEGVEPNSITFCTVIDAC 510
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 228/509 (44%), Gaps = 42/509 (8%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS 165
++ VL AC+ D++ G+ +H RI DTVL N LL++Y KCG L +R++F+
Sbjct: 2 FACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFE--- 58
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAFCVK--RGFEKED-----VTLTSLIDMYLKCGEID 218
A VA WN+M++ Q H F + F + D +T TS++ +++
Sbjct: 59 ---AMERRTVATWNTMITAYVQ-HDFFQEALEAFRRMDAPPSSITFTSVLGACCSPDDLE 114
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
G A+ R + + + I + ++LV MY C L +A ++F
Sbjct: 115 TGKAI-----HRQIGASSPQI----QADEILQNSLVTMYGKCGSLEDAERVFHGIRR--- 162
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNS 337
N W +MI+ Y N AI + + S G D T+ L AC L + +
Sbjct: 163 ---KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLET 219
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+++H LI + G E +V + LIDLY + G + AL++F + +DVV W+ I C
Sbjct: 220 --GMRIHALIRSKGVE-SAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAAC 276
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
HG + A LFR M N S +L CS L GK + G E +D
Sbjct: 277 VYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDD 336
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+ ++ ++ +CG + +F MP R VV+WT +I Q G + EA+ + M
Sbjct: 337 VLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM--- 393
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P++I VL AC +E+ + + + EP L +VD+ + C D
Sbjct: 394 DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASR-DFEPSLMVQTLLVDMYVK--CGDL 450
Query: 578 AEQLIAEMPFKPDKTI-WASMLKACETHN 605
AE FK I W S++ A N
Sbjct: 451 AEARRTFDGFKARDVISWTSLITAYSHEN 479
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + + +++H I D+ N L+++YA L +A +FD+M KN
Sbjct: 607 ALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKN 666
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSWTTM+ Y N RP A+ LY M V+PN + V+ +C+ G L G+ +H
Sbjct: 667 EVSWTTMIGGYAQNGRPAEALELYKAM----DVQPNFIAFVPVISSCADLGALVEGQRVH 722
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
R++ L+ + V++ L++MY KCG L R+ FD A A+ ++A + G
Sbjct: 723 ARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGS 782
Query: 187 QV----HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
QV C++ G + +TL S++ G +++ F M V+ GI
Sbjct: 783 QVLELYREMCLQ-GVQPNGITLLSVLVACSHMGMLEECEHRFECM-----VADHGIAPTS 836
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN---VALWNSMI 291
SC T D+ L EA K+ S + S + V+ W S +
Sbjct: 837 EHYSCMT-----DLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFL 883
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V + C ++ +G+ +H R+ GL + L++MYA L A + FD
Sbjct: 702 FVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTY 761
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ +W +M TAY + + LY M G V+PNG +VL ACS G L+
Sbjct: 762 CPDAGAWNSMATAYAQFGHGSQVLELYREMCLQG-VQPNGITLLSVLVACSHMGMLE 817
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 254/486 (52%), Gaps = 25/486 (5%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ+H V GF + L+ MY K G+ +A++ M +++ +S +I G
Sbjct: 60 LPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING 119
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y L ARK+FD+ + WN+MI+G + E NE
Sbjct: 120 ---------------YVRAGDLVNARKVFDEMPDR------KLTTWNAMIAGLIQFEFNE 158
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
E ++L +H G D YT S L + + Q+HG + G ELD +V S+
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVS--IGQQIHGYTIKYGLELDLVVNSS 216
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L +Y R G ++ + +P +++VAW+ LIMG ++G L++ M S N
Sbjct: 217 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 276
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ +VL CS LA +G+Q+HA +K G ++SLI MY KCG + D F
Sbjct: 277 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 336
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVE 540
+ D V W+ +I G +G+ EAI F M Q+ ++ NE+ FL +L AC H+GL +
Sbjct: 337 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 396
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ +F M +YG +P L+HY C+VDLLG+AGC D AE +I MP K D IW ++L A
Sbjct: 397 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKA 659
C H N ++ + +++L P D + YV+L+NV+A+ W +S+VRK+ + K +K+A
Sbjct: 457 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 516
Query: 660 GMSWIE 665
G+SW E
Sbjct: 517 GISWFE 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 203/549 (36%), Gaps = 157/549 (28%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA---DFTS------------- 53
++ C R+S+ GK LHC ++ G S D F N+L+SMY+ DF S
Sbjct: 51 IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110
Query: 54 ---------------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
L +A K+FDEM + + +W M+ + + L+ M
Sbjct: 111 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 170
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G P+ + +V + + +G+ IH + LE D V+ ++L MY++ G
Sbjct: 171 G-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG---- 225
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
KL D + N+ WN+++ G
Sbjct: 226 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 285
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+Q+HA +K G ++SLI MY KCG + D F+ + D V
Sbjct: 286 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 345
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W+ +I SAYG
Sbjct: 346 WSSMI---------------------------------------SAYG------------ 354
Query: 295 VLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL------I 347
+ Q +EAI L + + + M I+ F + L AC S L+ GL +
Sbjct: 355 -FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC-------SHSGLKDKGLELFDMMV 406
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
G++ + ++DL R G + A + +P K D+V W L+ C H +A
Sbjct: 407 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 466
Query: 407 YLLFRDM--INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
+F+++ I+ N ++++V AS +R + V V++ +++ + I
Sbjct: 467 QRVFKEILQIDPNDSACYVLLANV------HASAKRWRDVSE--VRKSMRDKNVKKEAGI 518
Query: 465 DMYLKCGEI 473
+ GE+
Sbjct: 519 SWFEHKGEV 527
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C QG+ +H IK G S + ++L+SMY+ L DA K F E
Sbjct: 281 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 340
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++ V W++M++AY + + + AI L+N M E ++E N + +L ACS SG D G
Sbjct: 341 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 87/230 (37%), Gaps = 51/230 (22%)
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C+K L A+ FR I +N + + ++ C+ SL GKQ+H V GF +
Sbjct: 24 CSKGNLRE-AFQRFRLNIFTNTS----LFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 457 DITLTSLIDMYLKCGEIDDGLA-------------------------------LFKFMPE 485
L+ MY K G+ +A +F MP+
Sbjct: 79 KFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD 138
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE----- 540
R + +W +I G Q +E ++ F+EM P+E T V S AGL
Sbjct: 139 RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS--AGLRSVSIGQ 196
Query: 541 --EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+TI +YGLE L + + + G D E +I MP +
Sbjct: 197 QIHGYTI------KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR 240
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 318/648 (49%), Gaps = 58/648 (8%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWT-TMVTAYTSNKRPNWAIRLYNHMLEYGS 100
+ L +Y + AH L +M + VS++ +++ +YT A+ +Y+ M +
Sbjct: 49 HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFDH 108
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
+ F ++A KAC+ GR +H R DT + N L+ MY+ CG +
Sbjct: 109 LT---FPFAA--KACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK----------------EDV 202
+F N V WN++++G CVK G+ + +
Sbjct: 164 AVFGAMRNR------TVVSWNAVIAG-------CVKNGYAERALEVFGEMAADGVGIDRA 210
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T+ S++ + +++ G A+ + ++ + + + +AL+DMY C
Sbjct: 211 TVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAV-----------KNALIDMYGKCRS 259
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC-IDSYT 321
L +AR++FD +V W +MI YVLN++ EAI+L + SG + T
Sbjct: 260 LEDARRVFDH-----CKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVT 314
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
L AC ++ + + A H L + G + D V + LID YAR G +K R
Sbjct: 315 MVYLLSACASMPS--GKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER 372
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ W+ + G T G A LF+ MI + + ++S+L + A L+ G
Sbjct: 373 GSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEG 431
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
K +H F + GF + T LID+Y K G++D ALF+++PE+DVV+WT II G +
Sbjct: 432 KNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIH 491
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G A+ AI + M++S KPN +T +L AC HAG+++E +F M+ +GL P+ EH
Sbjct: 492 GHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEH 551
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y C+VD+LG+AG ++A +LI +MPF+P ++W ++L AC H N + + A++L
Sbjct: 552 YSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLD 611
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
PE+ YV+L N+YA W + VR+ + G K+ G S +E S
Sbjct: 612 PENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 218/536 (40%), Gaps = 104/536 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + C R + G+++HCR + G D + N L+SMY + A +F M +
Sbjct: 114 AAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRT 173
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW ++ N A+ ++ M G V + +VL AC+ + DL+ GR +H
Sbjct: 174 VVSWNAVIAGCVKNGYAERALEVFGEMAADG-VGIDRATVVSVLPACAQAKDLNTGRAVH 232
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------WAA---------SA 171
+ + L + N L+DMY KC SL R++FD + W A A
Sbjct: 233 RLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRA 292
Query: 172 YGNVALWNSMLSGG-------------------------KQVHAFCVKRGFEKEDVTLTS 206
+ ++L ML G K HA C++ G + + T+
Sbjct: 293 FEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETA 352
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LID Y +CG++ L ER
Sbjct: 353 LIDAYARCGKMK----LMRLTLER------------------------------------ 372
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
SW A WN+ +SGY ++ + ++AI L + + + DS T S L
Sbjct: 373 -------GSWRAET------WNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASIL 419
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
A + +H ++T G+ + + LID+Y++ G++ +A LF LP+KD
Sbjct: 420 PAYAESADLKE--GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKD 477
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VVAW+ +I G + HG A LL+ M+ S N I+++L CS + G +V
Sbjct: 478 VVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-- 535
Query: 447 FCVKR---GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
F R G + L+DM + G I++ L + MP E W ++ C
Sbjct: 536 FKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGAC 591
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 167/452 (36%), Gaps = 116/452 (25%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C Q + + G+++H + GL + N L+ MY SL DA ++
Sbjct: 207 IDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRV 266
Query: 61 FDEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD K++VSWT M+ AY N R AI L ML G+ PNG +L AC+
Sbjct: 267 FDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMP 326
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT-RKLFDQYSNWAASAYGNVALW 178
+ H R L+ D + L+D Y +CG + +L + +W A W
Sbjct: 327 SGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAET------W 380
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+ LSG GK +H F +
Sbjct: 381 NAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLT 440
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
GF + T LID+Y K G++D ALF ++PE+DVV+WT II G
Sbjct: 441 LGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAG------------- 487
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
Y ++ AI L + SG
Sbjct: 488 ---------------------------------------YSIHGHARTAILLYDRMVESG 508
Query: 315 MCIDSYTFTSALKACINLLNFNSRFAL-----QVHGLIVTSGYELDYIVGSNLIDLYARL 369
++ T + L AC + + + VHGL+ + S L+D+ R
Sbjct: 509 GKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHY------SCLVDMLGRA 562
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
G ++ A L +P + W L+ C H
Sbjct: 563 GRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 6/254 (2%)
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS-GLIMGCTKHGLNSLA 406
+TSG+ L Y L +Y G SA L ++P+ V++S L+ T G + A
Sbjct: 37 LTSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREA 96
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
++ M + + K C+ L R G+ VH + GF + +LI M
Sbjct: 97 LAVYSAM----RAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISM 152
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+ CG++ A+F M R VVSW +I GC +NG A+ A+ F EM + + T
Sbjct: 153 YMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATV 212
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+ VL AC A + + ++ + GL ++ ++D+ G+ +DA ++
Sbjct: 213 VSVLPACAQAKDLNTGRAVHRLVE-DKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCK 271
Query: 587 FKPDKTIWASMLKA 600
D W +M+ A
Sbjct: 272 HDKDVVSWTAMIGA 285
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 208/696 (29%), Positives = 316/696 (45%), Gaps = 104/696 (14%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+++H +I G + N L+ +Y + L AH LFDE+ + +IV+ TT++ A++S
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFM----YSAVLKACSLSGDLDLGRLIHERITREKLE 137
N A ++ P G Y+A++ S + D + + R
Sbjct: 94 AGNSNLAREIF-------FATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146
Query: 138 YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF 197
D ++L G +AL +Q+H VK G
Sbjct: 147 PDNFTFTSVL-------------------------GALALIVEDEKQCQQIHCAVVKSGS 181
Query: 198 EKEDVTLTSLIDMYLKCGE---------IDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
L +L+ +++KC + LF+ M ERD +SWT +I G
Sbjct: 182 GFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAG------- 234
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
Y L AR+ D + V WN+MISGYV + EA+ +
Sbjct: 235 --------YVRNGELDAARQFLDGMTEKL------VVAWNAMISGYVHHGFFLEALEMFR 280
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE--LDYIVGSN--LID 364
++ G+ D +T+TS L AC N F QVH I+ + LD+ + N L
Sbjct: 281 KMYLLGIQWDEFTYTSVLSACANAGFF--LHGKQVHAYILRTEPRPSLDFSLSVNNALAT 338
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSG-------------------------------L 393
LY + G V A ++F+++P KD+V+W+ +
Sbjct: 339 LYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVM 398
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G ++G + LF M + + + + + C+ LA+L G+Q+HA V+ GF
Sbjct: 399 ISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGF 458
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +LI MY KCG ++ LF MP D VSW +I GQ+G +A+ F+
Sbjct: 459 DSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFEL 518
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M++ + P+ ITFL VLS C HAGLVEE F SM YG+ P +HY M+DLL +AG
Sbjct: 519 MLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAG 578
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
F +A+ +I MP +P IW ++L C H N L AE+L P+ YV+LSN
Sbjct: 579 KFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSN 638
Query: 634 VYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+YAT+G WD ++KVRK + G KK G SWIEV +
Sbjct: 639 MYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVEN 674
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 204/530 (38%), Gaps = 133/530 (25%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD---------FTSLNDAHKLFDEMARKNIV 70
KQ + +HC ++K G N LLS++ + + A KLFDEM ++ +
Sbjct: 167 KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDEL 226
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG------------------------- 105
SWTTM+ Y N + A + + M E V N
Sbjct: 227 SWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG 286
Query: 106 -----FMYSAVLKACSLSGDLDLGRLIHERI----TREKLEYDTVLMNTLLDMYVKCGSL 156
F Y++VL AC+ +G G+ +H I R L++ + N L +Y KCG +
Sbjct: 287 IQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKV 346
Query: 157 --TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
R++F+Q ++ WN++LSG Y+
Sbjct: 347 DEARQVFNQMP------VKDLVSWNAILSG--------------------------YVNA 374
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G ID+ + F MPER++++WT +I G
Sbjct: 375 GRIDEAKSFFEEMPERNLLTWTVMISGL-------------------------------- 402
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
A + +G EE++ L + + S G Y F A+ AC L
Sbjct: 403 --AQNGFG------------------EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAA 442
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
Q+H +V G++ G+ LI +YA+ G V++A LF +P D V+W+ +I
Sbjct: 443 L--MHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMI 500
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGF 453
+HG + A LF M+ + ++ +VL CS + G + + G
Sbjct: 501 AALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGI 560
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+ +ID+ + G+ + + + MP E W ++ GC +G
Sbjct: 561 CPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 143/354 (40%), Gaps = 78/354 (22%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ + L+ C + A VH ++ SG++ + + LID+Y + ++ SA LF
Sbjct: 16 YAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDE 75
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSL---------------------------------AYL 408
+ + D+VA + LI + G ++L A
Sbjct: 76 IRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIE 135
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRG--------------- 452
LFRD++ + + F +SVL + + ++ +Q+H VK G
Sbjct: 136 LFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVF 195
Query: 453 -------------------------FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
E+++++ T++I Y++ GE+D M E+
Sbjct: 196 VKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKL 255
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV---EEAWT 544
VV+W +I G +G EA+ F++M ++ +E T+ VLSAC +AG ++
Sbjct: 256 VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHA 315
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+P L+ L + L + G D+A Q+ +MP K D W ++L
Sbjct: 316 YILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAIL 368
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C ++ G+ LH ++++ G + GN L++MYA + AH LF M +
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
VSW M+ A + A+ L+ ML+ + P+ + VL CS +G ++ G
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKE-DILPDRITFLTVLSTCSHAGLVEEG 547
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 238/429 (55%), Gaps = 38/429 (8%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+D Y C +L +A KLFD A +VA W +++S L+ +A ++ I
Sbjct: 49 LIDAYGKCGLLKDALKLFD-----ALPQQDHVA-WATVLSACNLSNLPHKAFSISLPILH 102
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA----- 367
G+ D + F+S +KAC NL + + + Q+H + S + D +V S+L+D+YA
Sbjct: 103 EGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELP 162
Query: 368 --------------------------RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
R G ALELF P K++ AW+ LI G + G
Sbjct: 163 DYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSG 222
Query: 402 LNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
+ A LF +M + + ++SSV+ C+ A GKQVH + G+E
Sbjct: 223 NANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFIS 282
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+L+DMY KC ++ +F M +DVVSWT IIVG Q+G A+EA+ + +M+ + +K
Sbjct: 283 NALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVK 342
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PNE+TF+G++ AC H GLV + +F SM ++G+ P L+HY C++DL ++G D+AE
Sbjct: 343 PNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAEN 402
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
LI MP KPD+ WA++L AC+ H NTK+ IA+ LL PEDPS Y++LSN+YA GM
Sbjct: 403 LIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGM 462
Query: 641 WDSLSKVRK 649
W+++S VRK
Sbjct: 463 WENVSMVRK 471
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 203/454 (44%), Gaps = 70/454 (15%)
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVA---- 176
+ + +H +I + L + TL+D Y KCG L KLFD A+ V
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85
Query: 177 -------------------------LWNSMLSG-----------GKQVHAFCVKRGFEKE 200
+++S++ GKQ+HA + F ++
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
DV +SL+DMY K D G A+F+ + E +SWT +I G Y+
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISG---------------YARS 190
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI-DS 319
EA +LF + S + N+ W ++ISG V + +A+ L + G+ I D
Sbjct: 191 GRKLEALELFRE------SPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADP 244
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+S + AC N + QVH +++T GYE + + L+D+YA+ +V +A +F
Sbjct: 245 LVLSSVVGACAN--SAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIF 302
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ +KDVV+W+ +I+G +HGL A L+ DM+ + N+ ++ CS + +
Sbjct: 303 CEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVS 362
Query: 440 RGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVG 497
+G+ + V+ G T L+D++ + G +D+ L + MP + D +W ++
Sbjct: 363 KGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSA 422
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
C +G K A+ ++ LKP + + +LS
Sbjct: 423 CKHHGNTKMAVRIADHLLD--LKPEDPSSYILLS 454
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
N A ++H I+ SG + LID Y + G +K AL+LF LP++D VAW+ ++
Sbjct: 23 NPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLS 82
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS--LRRGKQVHAFCVKRGF 453
C L A+ + +++ + F+ SS++K C+ L S ++ GKQ+HA + F
Sbjct: 83 ACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPF 142
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
++D+ +SL+DMY K D G A+F + E +SWT +I G ++GR EA+ F+E
Sbjct: 143 FEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRE 202
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
S K N + ++S +G +A +F M+ E
Sbjct: 203 ---SPFK-NLYAWTALISGLVQSGNANDALYLFVEMRRE 237
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 190/494 (38%), Gaps = 142/494 (28%)
Query: 16 RRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTM 75
R++ K LH +IIK GL+ L+ Y L DA KLFD + +++ V+W T+
Sbjct: 21 RKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATV 80
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHERITR 133
++A + P+ A + +L G ++P+ F++S+++KAC+ G + LG+ +H R
Sbjct: 81 LSACNLSNLPHKAFSISLPILHEG-LQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLL 139
Query: 134 EKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQY-----SNWAA----------------- 169
D V+ ++L+DMY K R +FD +W A
Sbjct: 140 SPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALEL 199
Query: 170 ---SAYGNVALWNSMLSG------------------------------------------ 184
S + N+ W +++SG
Sbjct: 200 FRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAV 259
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQVH + G+E +L+DMY KC ++ +F M +DVVSWT IIVG
Sbjct: 260 RELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVG 319
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ + EA L+D + +++G NE
Sbjct: 320 T---------------AQHGLAEEALTLYD----------------DMVLAGVKPNE--- 345
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
TF + AC S L G + D+ + +
Sbjct: 346 ------------------VTFVGLIYAC-------SHVGLVSKGRALFKSMVEDFGIRPS 380
Query: 362 L------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
L +DL++R G++ A L +P K D W+ L+ C HG +A + ++
Sbjct: 381 LQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLL 440
Query: 415 N-SNQDVNQFIISS 427
+ +D + +I+ S
Sbjct: 441 DLKPEDPSSYILLS 454
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + GK +HC +I G +F N L+ MYA + + A +F EM RK++VSW
Sbjct: 254 CANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSW 313
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ + A+ LY+ M+ G V+PN + ++ ACS G + GR + + +
Sbjct: 314 TSIIVGTAQHGLAEEALTLYDDMVLAG-VKPNEVTFVGLIYACSHVGLVSKGRALFKSMV 372
Query: 133 -----REKLEYDTVLMNTLLDMYVKCGSL 156
R L++ T LLD++ + G L
Sbjct: 373 EDFGIRPSLQHYT----CLLDLFSRSGHL 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 138/352 (39%), Gaps = 71/352 (20%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+K GK LH R + +D ++L+ MYA F + +FD + + +SWT M++
Sbjct: 127 VKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISG 186
Query: 79 YTSNKR-------------------------------PNWAIRLYNHMLEYGSVEPNGFM 107
Y + R N A+ L+ M G + +
Sbjct: 187 YARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLV 246
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
S+V+ AC+ S +LG+ +H + E + N L+DMY KC + + +
Sbjct: 247 LSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKY----IF 302
Query: 168 AASAYGNVALWNSMLSGGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEI 217
+V W S++ G Q H V G + +VT LI G +
Sbjct: 303 CEMRRKDVVSWTSIIVGTAQ-HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLV 361
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF------D 271
G ALF M E GI +C L+D++S L EA L
Sbjct: 362 SKGRALFKSMVED-----FGIRPSLQHYTC-----LLDLFSRSGHLDEAENLIRTMPVKP 411
Query: 272 QYSSWAA-----SAYGNVALWNSMISGYVLNEQNEEAIT--LLSHIHS-SGM 315
+WAA +GN + I+ ++L+ + E+ + LLS+I++ +GM
Sbjct: 412 DEPTWAALLSACKHHGNTKM-AVRIADHLLDLKPEDPSSYILLSNIYAGAGM 462
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 250/473 (52%), Gaps = 20/473 (4%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + V+L LI + ++ G + DG A+ R V G S F ++LV
Sbjct: 61 GVRADPVSLCRLIKLCVRHGTVGDGRAI-----HRHVSLCAHGGGGATHGSLFVSNSLVS 115
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSG 314
MY+ +L +A +LF NV W ++++ + +EA+ L + G
Sbjct: 116 MYAKFGMLDDALELF------GGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
+ +SYTF+S L AC +H I+ G + D V S+LID Y +LG++ S
Sbjct: 170 VAANSYTFSSVLGAC-----GTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
+F + D+V W+ +I G + G A LF M S NQ ++SVL+ C+
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ L G+QVHA +K ++++ I +L+DMY KCG + D ALF M +RDV+SW+ +
Sbjct: 285 MVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTM 342
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G QNGR+ EA+ F M PN IT +GVL AC HAGLVE+ W F SM +G
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFG 402
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
++P EH CMVDLLG+AG D+A + I EM F+PD IW ++L AC H N L S A
Sbjct: 403 IQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAA 462
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
++L PED ++LSN+YA L W + K K + G KK G SWIE+
Sbjct: 463 TEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIEL 515
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 61/287 (21%)
Query: 4 RRIVEALRH--CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
R I +RH G R+I + SL +F N+L+SMYA F L+DA +LF
Sbjct: 71 RLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELF 130
Query: 62 DEMARKNIVSWTTMVTAYTSNK-RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
M ++N+VSWTT+V A + R A+R M G V N + +S+VL AC G
Sbjct: 131 GGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG-VAANSYTFSSVLGACGTPGV 189
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L +H I + L+ D + ++L+D Y+K G L R +FD+ ++ +W
Sbjct: 190 L---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTC------DLVVW 240
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
NS+++G G+QVHA +K
Sbjct: 241 NSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK 300
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
++++ + +L+DMY KCG + D ALF+ M +RDV+SW+ +I G
Sbjct: 301 --YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISG 345
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 52/317 (16%)
Query: 24 SLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
++H IIK GL D+F ++L+ Y L+ +FDEM ++V W +++ + +
Sbjct: 192 AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSG 251
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
A+ L+ M E G + G + S VL+AC+ L++GR +H + K + D +L
Sbjct: 252 DGVGAMELFMRMKESGFLANQGTLTS-VLRACTGMVMLEVGRQVHAHVL--KYDRDLILH 308
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----K 194
N LLDMY KCG L D + ++ +V W++M+SG G+ V A V
Sbjct: 309 NALLDMYCKCGC----LLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKA 364
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGL-------ALFNFMPERDVVSWTGIIVGCFECSC 247
G ++T+ ++ G ++DG LF PER+ C+C
Sbjct: 365 EGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPERE------------HCNC 412
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW------NSMISGYVLNE--- 298
+VD+ L EA K + S L N+ ++ Y E
Sbjct: 413 -----MVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILK 467
Query: 299 ---QNEEAITLLSHIHS 312
+++ A LLS+I++
Sbjct: 468 LEPEDQGARILLSNIYA 484
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ LR C ++ G+ +H ++KY +D+ N LL MY L DA LF M
Sbjct: 275 LTSVLRACTGMVMLEVGRQVHAHVLKY--DRDLILHNALLDMYCKCGCLLDADALFSRMH 332
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++++SW+TM++ N R A+++++ M G PN VL ACS +G ++ G
Sbjct: 333 DRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPT-PNNITMVGVLFACSHAGLVEDG 390
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 235/423 (55%), Gaps = 12/423 (2%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L+ L++MYS+C+ AR + D A + WN++I+GY+ +A+
Sbjct: 129 FVLNTLINMYSSCSYPSTARSVLDS----APKGASDTVSWNTIIAGYIHAGLPNKALQAF 184
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S + + +D T +AL AC + H L+VT+G+E++ +GS+LI +YA
Sbjct: 185 SQMAKGQVMLDDVTLLNALVACARTCMM--KVGKLCHALLVTNGFEINCYMGSSLISMYA 242
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G V+ A +F +P ++ V W+ +I G T+ G + A LFRDM + V+ IS+
Sbjct: 243 KCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATIST 302
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ C + +L G+ VHA+C G K+ SLIDMY KCG+I +F M +RD
Sbjct: 303 VVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRD 362
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
SWT II+G NG + EA+ F +M + + PNEITFLGVL++C H GLVE+ + F
Sbjct: 363 NFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHF 422
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M YG+ P +EHY CMVDLLG+A +AEQ I EMP PD +W S+L AC T
Sbjct: 423 HRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGE 482
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK---AGKKLGEKKAGMSW 663
L +AE++ P V+LS VYAT W +KVR +G+K K+ G S+
Sbjct: 483 VGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK--TKQPGCSF 540
Query: 664 IEV 666
IEV
Sbjct: 541 IEV 543
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-- 66
AL + S+ G LH +K GLS D F N L++MY+ + + A + D +
Sbjct: 99 ALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGA 158
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+ VSW T++ Y PN A++ ++ M + G V + L AC+ + + +G+L
Sbjct: 159 SDTVSWNTIIAGYIHAGLPNKALQAFSQMAK-GQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H + E + + ++L+ MY KCG + R++FD + N W SM+SG
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR------NAVCWTSMISG 271
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ VHA+C G K+
Sbjct: 272 YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKD 331
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG+I +F M +RD SWT II+G
Sbjct: 332 ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMG 372
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 179/474 (37%), Gaps = 109/474 (22%)
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SL 156
G + + + SA L + + +G +H + L DT ++NTL++MY C S
Sbjct: 87 GYMPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPST 146
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
R + D A+ + WN++++G
Sbjct: 147 ARSVLDSAPKGAS----DTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNA 202
Query: 185 ------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
GK HA V GFE +SLI MY KCG+++D +F+ MP+R+
Sbjct: 203 LVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNA 262
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
V WT +I G
Sbjct: 263 VCWTSMISG--------------------------------------------------- 271
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
Y Q++EAI L + +G+ +D T ++ + +C + + VH G
Sbjct: 272 -YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALD--LGRYVHAYCDIHGL 328
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D V ++LID+Y++ G++K A ++F + K+D +W+ +IMG +GL+ A LF
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQ 388
Query: 413 MINSNQDV-NQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + N+ VL CS + +G + H G ++D+ +
Sbjct: 389 MEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRA 448
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+ + K MP D V W ++ C G A Y E IQ L+PN+
Sbjct: 449 KLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLA-EYVAERIQV-LEPNK 500
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ AL C + +K GK H ++ G + + G++L+SMYA + DA ++
Sbjct: 194 LDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRI 253
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +N V WT+M++ YT + AI+L+ M + V+ + S V+ +C G
Sbjct: 254 FDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDM-QIAGVKVDDATISTVVSSCGQMGA 312
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQY 164
LDLGR +H L D + N+L+DMY KCG + +K +D +
Sbjct: 313 LDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDI-KKAYDIF 355
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I + CGQ ++ G+ +H +GL +DI N+L+ MY+ + A+ +
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +++ SWT ++ + +N A+ L+ M E G V PN + VL +CS G
Sbjct: 355 FCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 414
Query: 121 LDLG 124
++ G
Sbjct: 415 VEQG 418
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ + +S+ L + + S+ G Q+HA VK G + L +LI+MY C ++
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSV 150
Query: 480 FKFMPE--RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
P+ D VSW II G G +A+ F +M + ++ +++T L L AC
Sbjct: 151 LDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTC 210
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
++ + + ++ G E + ++ + + G +DA ++ MP + + W SM
Sbjct: 211 MM-KVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTSM 268
Query: 598 LKA 600
+
Sbjct: 269 ISG 271
>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/669 (27%), Positives = 329/669 (49%), Gaps = 47/669 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G+++H +++ D+F G +L++MYA + A + F M +N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTT + + + P A+ L M+ G V N + +++L AC+ + IH
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQIH 294
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + ++ D V+ L+ Y G L+ K+F++ A N ++W++ +SG
Sbjct: 295 GMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISGVS 349
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q+ +G D S+ + I+ G L + + + GI
Sbjct: 350 NHSLLRSVQLLRRMFHQGLRPNDKCYASV---FSSVNSIEFGGQLHSSAIKEGFIH--GI 404
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG SAL MYS C+ + ++ K+F++ + W +M++G+ +
Sbjct: 405 LVG---------SALSTMYSRCDNVQDSYKVFEEMQERDGVS------WTAMVAGFATHG 449
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELD 355
+ EA ++ G D + T+ L AC LL +VHG + E
Sbjct: 450 HSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLK-----GKEVHGHTLRVYGETT 504
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+I I +Y++ V++A +F P KD V WS +I G +G A LF+ M+
Sbjct: 505 FI-NDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVA 563
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ +I SS+L +C+ +A K +H + +K G + +SL+ +Y + G +DD
Sbjct: 564 ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDD 623
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F + D+V+WT II G Q+G ++ A+A F M+Q ++P+ + + VLSAC
Sbjct: 624 SRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLVE+ + F SM+ YG+EP L+HY CMVDLLG++G +A+ + MP KPD +W+
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
+++ AC H++T L + E + D + LSN+ A G W+ ++++RK K +
Sbjct: 744 TLVAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKGV- 801
Query: 656 EKKAGMSWI 664
K+ G S +
Sbjct: 802 NKEPGWSMV 810
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 269/597 (45%), Gaps = 43/597 (7%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ ++C K GLS + + ++ + A L DA ++F + + V W V+ N
Sbjct: 89 EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
A+ ++ M+ +GS EPN F YS L AC+ +L +GR +H + R EYD +
Sbjct: 149 GEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKRGFE 198
+L++MY KCG + + + + NV W + ++G Q V A + R
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWR----MPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMV 263
Query: 199 KEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVD 255
+ V + + + L C ++ R+ G+++ C AL+
Sbjct: 264 RNGVAINKYTATSILLACAQMS---------MVREASQIHGMVLKTEMYLDCVVKEALIS 314
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y+N + + K+F++ A N ++W++ ISG V N ++ LL + G+
Sbjct: 315 TYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGL 368
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + S + +N + F Q+H + G+ +VGS L +Y+R NV+ +
Sbjct: 369 RPNDKCYASVFSS-VNSIEFGG----QLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDS 423
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F + ++D V+W+ ++ G HG + A+L FR+MI + ++++L C+
Sbjct: 424 YKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRS 483
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L +GK+VH + R + + I MY KC + +F P +D V W+ +I
Sbjct: 484 ECLLKGKEVHGHTL-RVYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMI 542
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G NG +EAI+ FQ M+ + ++ + +LS C + A + Y +
Sbjct: 543 SGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLC-----ADIARPFYCKPLHGYAI 597
Query: 556 EPHL----EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ + +V + ++G DD+ ++ E+ PD W +++ H +++
Sbjct: 598 KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQ 653
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QV+ G + V + ++DL A+ G ++ AL +F V W+ + G ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LA +FRDM+ + + N F S L C+ L G+ VH ++R E + T
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL++MY KCG++ + F MP R+VVSWT I G Q+ A+ +EM+++ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269
Query: 522 NEITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N+ T +L AC +V EA I +K E L+ ++ ++ G + +E+
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKE--ALISTYTNFGFIELSEK 327
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+ E +++IW++ + H+ + V ++
Sbjct: 328 VFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLL 360
>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/669 (27%), Positives = 329/669 (49%), Gaps = 47/669 (7%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C + G+++H +++ D+F G +L++MYA + A + F M +N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTT + + + P A+ L M+ G V N + +++L AC+ + IH
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQIH 294
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + ++ D V+ L+ Y G L+ K+F++ A N ++W++ +SG
Sbjct: 295 GMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISGVS 349
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
Q+ +G D S+ + I+ G L + + + GI
Sbjct: 350 NHSLLRSVQLLRRMFHQGLRPNDKCYASV---FSSVNSIEFGGQLHSSAIKEGFIH--GI 404
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+VG SAL MYS C+ + ++ K+F++ + W +M++G+ +
Sbjct: 405 LVG---------SALSTMYSRCDNVQDSYKVFEEMQERDGVS------WTAMVAGFATHG 449
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELD 355
+ EA ++ G D + T+ L AC LL +VHG + E
Sbjct: 450 HSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLK-----GKEVHGHTLRVYGETT 504
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
+I I +Y++ V++A +F P KD V WS +I G +G A LF+ M+
Sbjct: 505 FI-NDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVA 563
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
++ ++ +I SS+L +C+ +A K +H + +K G + +SL+ +Y + G +DD
Sbjct: 564 ASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDD 623
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F + D+V+WT II G Q+G ++ A+A F M+Q ++P+ + + VLSAC
Sbjct: 624 SRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
GLVE+ + F SM+ YG+EP L+HY CMVDLLG++G +A+ + MP KPD +W+
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
+++ AC H++T L + E + D + LSN+ A G W+ ++++RK K +
Sbjct: 744 TLVAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKGV- 801
Query: 656 EKKAGMSWI 664
K+ G S +
Sbjct: 802 NKEPGWSMV 810
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 269/597 (45%), Gaps = 43/597 (7%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ ++C K GLS + + ++ + A L DA ++F + + V W V+ N
Sbjct: 89 EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
A+ ++ M+ +GS EPN F YS L AC+ +L +GR +H + R EYD +
Sbjct: 149 GEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAFCVKRGFE 198
+L++MY KCG + + + + NV W + ++G Q V A + R
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWR----MPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMV 263
Query: 199 KEDVTLT--SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-FECSCFTLSALVD 255
+ V + + + L C ++ R+ G+++ C AL+
Sbjct: 264 RNGVAINKYTATSILLACAQMS---------MVREASQIHGMVLKTEMYLDCVVKEALIS 314
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
Y+N + + K+F++ A N ++W++ ISG V N ++ LL + G+
Sbjct: 315 TYTNFGFIELSEKVFEE-----AGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGL 368
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + S + +N + F Q+H + G+ +VGS L +Y+R NV+ +
Sbjct: 369 RPNDKCYASVFSS-VNSIEFGG----QLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDS 423
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
++F + ++D V+W+ ++ G HG + A+L FR+MI + ++++L C+
Sbjct: 424 YKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRS 483
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
L +GK+VH + R + + I MY KC + +F P +D V W+ +I
Sbjct: 484 ECLLKGKEVHGHTL-RVYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMI 542
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G NG +EAI+ FQ M+ + ++ + +LS C + A + Y +
Sbjct: 543 SGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLC-----ADIARPFYCKPLHGYAI 597
Query: 556 EPHL----EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ + +V + ++G DD+ ++ E+ PD W +++ H +++
Sbjct: 598 KAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQ 653
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
QV+ G + V + ++DL A+ G ++ AL +F V W+ + G ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LA +FRDM+ + + N F S L C+ L G+ VH ++R E + T
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL++MY KCG++ + F MP R+VVSWT I G Q+ A+ +EM+++ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269
Query: 522 NEITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N+ T +L AC +V EA I +K E L+ ++ ++ G + +E+
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKE--ALISTYTNFGFIELSEK 327
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
+ E +++IW++ + H+ + V ++
Sbjct: 328 VFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLL 360
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/602 (29%), Positives = 303/602 (50%), Gaps = 85/602 (14%)
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY P++A LY ML + + + Y +++ACS+ + +H + + +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLS-NYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
D + NTL++ + C ++T ++F++ +S +V+ WNS+L+G
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNE-----SSVLDSVS-WNSILAG----------- 288
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
Y++ G +++ +++ MPER +++ +IV F + LV
Sbjct: 289 ---------------YIEIGNVEEAKHIYHQMPERSIIASNSMIV------LFGMRGLV- 326
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
EA KLFD+ ++ W+++I+ + NE EEAI +H G+
Sbjct: 327 --------VEACKLFDEMLE------KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372
Query: 316 CIDSYTFTSALKACINLLNFN---------------SRFALQ--------------VHGL 346
+D SAL AC NLL N S LQ V
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ Y LD I +++I Y + V +A +F +P+KDVV+WS +I G ++ L
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 492
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF++M S ++ + SV+ C+ LA+L +GK VHA+ + G I T+LIDM
Sbjct: 493 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 552
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y+KCG ++ L +F M E+ + +W +I+G NG + ++ F M + + PNEITF
Sbjct: 553 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF 612
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+GVL ACRH GLV+E F SM ++ ++P+++HY CMVDLLG+AG +AE+L+ MP
Sbjct: 613 MGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP 672
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
PD W ++L AC+ H ++++ + +L+ P+ +V+LSN+YA+ G WD + +
Sbjct: 673 MTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLE 732
Query: 647 VR 648
+R
Sbjct: 733 IR 734
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 244/536 (45%), Gaps = 51/536 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C RRS + K +H ++K G D++ N L++ ++ +++ DA ++F+E + +
Sbjct: 220 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 279
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF-----MYSAVLKACSLSGDLDLG 124
VSW +++ Y A +Y+ M E + N M V++AC L ++
Sbjct: 280 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEM--- 336
Query: 125 RLIHERITREKL-------EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
L + +T L E + T + M+ K G + ++ + A SA N+ +
Sbjct: 337 -LEKDMVTWSALIACFQQNEMYEEAIRTFVGMH-KIGVMVDEVV---AVSALSACANLLV 391
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
N GK +H+ +K G E +LI MY KCG+I LF+ D++SW
Sbjct: 392 VNM----GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 447
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I G Y CN++ A+ +FD +V W+SMISGY N
Sbjct: 448 MISG---------------YLKCNLVDNAKAIFDSMPE------KDVVSWSSMISGYAQN 486
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
+ +E + L + SG D T S + AC L VH I +G ++ I
Sbjct: 487 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ--GKWVHAYIKRNGLTINVI 544
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+G+ LID+Y + G V++ALE+F+ + +K + W+ LI+G +GL + +F +M +
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604
Query: 418 QDVNQFIISSVLKVCSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
N+ VL C + + G+ ++ + ++D+ + G++ +
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 664
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
L MP DV +W ++ C ++G ++ +++I+ L+P+ F +LS
Sbjct: 665 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 718
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V AL C + GK +H +K G I N L+ MY+ + A KLFDE
Sbjct: 380 VSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL 439
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV------------------------- 101
+++SW +M++ Y + A +++ M E V
Sbjct: 440 LDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM 499
Query: 102 -----EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+P+ +V+ AC+ L+ G+ +H I R L + +L TL+DMY+KCG +
Sbjct: 500 QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCV 559
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG 184
L Y ++ WN+++ G
Sbjct: 560 ETALEVFY----GMIEKGISTWNALILG 583
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 17/247 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C + +++QGK +H I + GL+ ++ G L+ MY + A ++F
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K I +W ++ N ++ ++++M + V PN + VL AC G +
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNM-KKCHVTPNEITFMGVLGACRHMGLV 625
Query: 122 DLGR-LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
D G+ + I K++ + ++D+ + G L +L ++ +VA W
Sbjct: 626 DEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM-----PMTPDVATW 680
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTS--------LIDMYLKCGEIDDGLALFNFMPER 230
++L K+ + R ++ + L L ++Y G+ DD L + M +
Sbjct: 681 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 740
Query: 231 DVVSWTG 237
V+ G
Sbjct: 741 RVLKIPG 747
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 298/602 (49%), Gaps = 37/602 (6%)
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
+ + + + + N A + M + G V + + Y + +AC L GRL+H R+ R
Sbjct: 53 LVSLSKHGKLNEAFEFFQEMDKAG-VSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMG 110
Query: 136 LEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAA-------SAYGNVALWNSMLSGG 185
+E +VL+ N +L MY +CGSL KLFD+ S+ A SAY L + +
Sbjct: 111 IENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVG-- 168
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ + ++ G + T+L+ + +D G + + + S I G
Sbjct: 169 --LFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETG---- 222
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+V+MY C L A+++FDQ A W ++ GY + +A+
Sbjct: 223 -------IVNMYVKCGWLVGAKRVFDQM------AVKKPVAWTGLMVGYTQAGRARDALK 269
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + + G+ DS+ F+ LKAC +L RF Q+H + G E + VG+ L+D
Sbjct: 270 LFVDLITEGVEWDSFVFSVVLKACASLEEL--RFGKQIHACVAKLGLECEVSVGTPLVDF 327
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFI 424
Y + + +SA F + + + V+WS +I G + A F+ + + N V N F
Sbjct: 328 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFT 387
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+S+ + CS LA G QVHA +KR ++LI MY KCG +DD +F+ M
Sbjct: 388 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD 447
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
D+V+WT I G G A EA+ F++M+ +KPN +TF+ VL+AC HAGLVE+
Sbjct: 448 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 507
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
+M +Y + P ++HY CM+D+ ++G D+A + + MPF+PD W L C TH
Sbjct: 508 YLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH 567
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSW 663
N +L I E+L PED + YV+ N+Y G W+ ++V K +++ +K+ SW
Sbjct: 568 KNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSW 627
Query: 664 IE 665
I+
Sbjct: 628 IQ 629
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 222/533 (41%), Gaps = 106/533 (19%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + RS+ G+ LH R+ + + N +L MY + SL DA KLFDEM+ N VS
Sbjct: 91 CRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSR 150
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
TTM++AY + A+ L++ MLE G P+ MY+ +LK+ LD+GR IH +
Sbjct: 151 TTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS-MYTTLLKSLVNPRALDIGRQIHAHVI 209
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL------------- 177
R L + + +++MYVKCG L +++FDQ + A+ + +
Sbjct: 210 RAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALK 269
Query: 178 -----------WNSM--------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
W+S L GKQ+HA K G E E T L+D Y+
Sbjct: 270 LFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYI 329
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
KC + F + E + VSW+ II G
Sbjct: 330 KCSSFESACRAFQEIREPNDVSWSAIISG------------------------------- 358
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACIN 331
Y Q EEA+ + S + + ++S+T+TS +AC
Sbjct: 359 ---------------------YCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSV 397
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + N QVH + S LI +Y++ G + A E+F + D+VAW+
Sbjct: 398 LADCN--IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWT 455
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-----VHA 446
I G +G S A LF M++ N +VL CS + +GK +
Sbjct: 456 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRK 515
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ V + D +ID+Y + G +D+ L K MP E D +SW + GC
Sbjct: 516 YNVAPTIDHYDC----MIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGC 564
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ GK +H + K GL ++ G L+ Y +S A + F E+ N
Sbjct: 290 LKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 349
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW+ +++ Y + A++ + + +V N F Y+++ +ACS+ D ++G +H
Sbjct: 350 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHA 409
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA-----SAYGNVA- 176
+ L + L+ MY KCG L ++F+ N W A + YGN +
Sbjct: 410 DAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASE 469
Query: 177 ---LWNSMLSGGKQV-------------HAFCVKRGFEKEDVTLTS------------LI 208
L+ M+S G + HA V++G D L +I
Sbjct: 470 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMI 529
Query: 209 DMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGCF 243
D+Y + G +D+ L MP E D +SW + GC+
Sbjct: 530 DIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCW 565
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 198/682 (29%), Positives = 334/682 (48%), Gaps = 73/682 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++I T N+++S YA + +A +LFD M ++N+VSW +M+ Y N+ A RL++ M
Sbjct: 44 RNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRM 103
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ + + ++ ++ + G+L+ R + + ++ DTV N L+ Y K
Sbjct: 104 FKR-----DIYSWTLMITCYTRIGELEKARELFNLLPDKQ---DTVCRNALIAGYAKKRL 155
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLI 208
+KLFD+ NV WNS+LSG + + F E+ V+ ++
Sbjct: 156 FREAKKLFDEM------LVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMV 209
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT----------------LSA 252
D Y+ G++D F +P +VVSW ++ G T +A
Sbjct: 210 DGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNA 269
Query: 253 LVDMYSNCNVLCEARKLFDQYS-----SWAAS--------------------AYGNVALW 287
++ Y N + +A KLF + SW A Y N+A
Sbjct: 270 MIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQ 329
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MI+GY+ + + +EA + S I DS + S + + + AL++ +
Sbjct: 330 TAMINGYLQSGRMDEANEIFSQISVR----DSVCWNSMITGYAHCGRTDE--ALRLFQEM 383
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
V D + + +I YA+ G + ALE+F+ + +++VV+W+ LI G ++GL A
Sbjct: 384 VCK----DMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEAL 439
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
F M + +Q I L+ + LA+L G Q+H +K GF + +++ MY
Sbjct: 440 NCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMY 499
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
K G + + +F + +DVVSW +I G NG KEA+ F+ M + P+E+TF
Sbjct: 500 AKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFT 559
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
G+LSAC H G V++ +F SM Y ++P EHY C+++LLG+ G ++A +++ M
Sbjct: 560 GLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKT 619
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
IW ++L AC H+N +L AE+LLA P++ S YV+LSN++A G WD + +V
Sbjct: 620 VSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERV 679
Query: 648 RKAGKK-LGEKKAGMSWIEVSS 668
R K+ EK+ G SWIE+ +
Sbjct: 680 RVLMKENKAEKQPGCSWIEIDN 701
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 209/532 (39%), Gaps = 137/532 (25%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------- 244
E+ VT S+I Y K G I + LF+ MP+R++VSW +I G
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 245 ------------CSCFT-----------------------LSALVDMYSNCNVLCEARKL 269
+C+T +AL+ Y+ + EA+KL
Sbjct: 103 MFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKL 162
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS-----HIHSSGMCIDSYTFTS 324
FD+ NV WNS++SGY N + + + ++ S + +D Y
Sbjct: 163 FDEM------LVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVG 216
Query: 325 ALKAC---------INLLNFNSRFALQVHGLIVTSGYEL-------DYIVGSNLIDLYAR 368
L + N++++ + + H +T L + + + +I Y R
Sbjct: 217 DLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVR 276
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG--------LNSLAY-------LLFRDM 413
+ A +LF +P+KD V+W+ +I G + G LN + Y +
Sbjct: 277 ENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGY 336
Query: 414 INSNQ--DVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-----RGFE----KEDITLTS 462
+ S + + N+ ++ C S+ G +A C + R F+ K+ ++ +
Sbjct: 337 LQSGRMDEANEIFSQISVRDSVCWNSMITG---YAHCGRTDEALRLFQEMVCKDMVSWNT 393
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+I Y + G++D L +F M ER+VVSW +I G QNG EA+ F M Q KP+
Sbjct: 394 MIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPD 453
Query: 523 EITFLGVLSACR-----HAGLVEEAWTIFT-------------SMKPEYGLEPHLEHYYC 564
+ T + L A + G+ TI T +M + G P E+ +
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 565 MVD----------LLGQA--GCFDDAEQLIAEMPFK---PDKTIWASMLKAC 601
+ + G A GC +A +L MP + PD+ + +L AC
Sbjct: 514 EIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D IV LR ++ G LH IK G D+F N +L+MYA + +A +F
Sbjct: 453 DQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVF 512
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E+ K++VSW +++ Y N A+ L+ M G + P+ ++ +L AC+ G +
Sbjct: 513 AEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGII-PDEVTFTGLLSACNHGGFV 571
Query: 122 DLGRLIHERIT 132
D G + + +T
Sbjct: 572 DQGLNLFKSMT 582
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
E+ +T S+I Y K G I + LF MP+R++VSW +I G N ++A F
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL---G 570
M K + ++ +++ G +E+A +F L P + C L+
Sbjct: 103 M----FKRDIYSWTLMITCYTRIGELEKARELFN-------LLPDKQDTVCRNALIAGYA 151
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ F +A++L EM K + W S+L + +L
Sbjct: 152 KKRLFREAKKLFDEMLVK-NVVSWNSILSGYTKNGKMQL 189
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 238/420 (56%), Gaps = 11/420 (2%)
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+L+ MY+ C + +ARK+FD+ S ++ WNSMISGY EA+ L +
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQ------KDLVSWNSMISGYSKMRHAGEAVGLFREMM 220
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+G + + S L AC L + + V +V + L+Y +GS LI +Y + G+
Sbjct: 221 EAGFQPNEMSLVSVLGACGELGDL--KLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGD 278
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA +F + KKD V W+ +I G ++G++ A LF+DM S+ +Q + +L
Sbjct: 279 LVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSA 338
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ + +L GKQV + +RGF+ + T+L+DMY KCG +D+ +F MP+++ VSW
Sbjct: 339 CASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSW 398
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQS--RLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+I +G+A+EA+A F+ M+ + PN+ITF+GVLSAC HAGLV+E +F M
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+GL P +EHY CMVDL +AG ++A + MP KPD+ I ++L AC+ N +
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDI 518
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+ + LL P + YV+ S +YA L WD +++R K+ G K G SWI+++S
Sbjct: 519 SERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINS 578
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 229/498 (45%), Gaps = 45/498 (9%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SIKQ K +H ++ L+ I N+ L AD A F + S+ M+
Sbjct: 44 SIKQLKQIHAQL----LTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 78 AY-TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T+ + + A+ Y+ M ++ ++PN Y + ACS ++ GR+ H + R L
Sbjct: 100 GLSTAWNKSSLALEFYSRM-KFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGL 158
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQ 187
+ D + ++L+ MY +CG + RK+FD+ S ++ WNSM+SG G+
Sbjct: 159 DEDGHVSHSLITMYARCGKMGDARKVFDEISQ------KDLVSWNSMISGYSKMRHAGEA 212
Query: 188 VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V F ++ GF+ +++L S++ CGE+ D L L ++ E ++
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLG---ACGELGD-LKLGTWVEEF-------VVENKMTL 261
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F SAL+ MY C L AR++FD + WN+MI+GY N +EEAI
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKK------KDKVTWNAMITGYAQNGMSEEAIK 315
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + S D T L AC ++ + QV G++ D VG+ L+D+
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALD--LGKQVEIYASERGFQDDVYVGTALVDM 373
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQF 423
YA+ G++ +A +F+ +PKK+ V+W+ +I HG A LF+ M+N V N
Sbjct: 374 YAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 424 IISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
VL C + G+++ H G + + ++D++ + G +++
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMT 493
Query: 483 MPERDVVSWTGIIVGCGQ 500
MPE+ G ++G Q
Sbjct: 494 MPEKPDEVILGALLGACQ 511
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 185/448 (41%), Gaps = 133/448 (29%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++ G+ HC +I+ GL +D ++L++MYA + DA K+FDE+++K++VSW
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSW 196
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M++ Y+ + A+ L+ M+E G +PN +VL AC GDL LG + E +
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAG-FQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG------ 184
K+ + + + L+ MY KCG L R++FD + WN+M++G
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK------KDKVTWNAMITGYAQNGM 309
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GKQV + +RGF+ + T+
Sbjct: 310 SEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTA 369
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+DMY KCG +D+ +F MP+++ VSW +I
Sbjct: 370 LVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMI--------------------------- 402
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFTS 324
S + Q +EA+ L + + G + + TF
Sbjct: 403 -------------------------SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVG 437
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNV 372
L AC VH +V G L +++ S+ ++DL++R G++
Sbjct: 438 VLSAC-------------VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 373 KSALELFHRLPKK-DVVAWSGLIMGCTK 399
+ A + +P+K D V L+ C K
Sbjct: 485 EEAWDFVMTMPEKPDEVILGALLGACQK 512
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 11/326 (3%)
Query: 287 WNSMISGYVLN-EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVH 344
+N MI G ++ A+ S + G+ ++ T+ AC NLL N R H
Sbjct: 94 FNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMG---H 150
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
++ G + D V +LI +YAR G + A ++F + +KD+V+W+ +I G +K
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LFR+M+ + N+ + SVL C L L+ G V F V+ ++LI
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY KCG++ +F M ++D V+W +I G QNG ++EAI FQ+M S P++I
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 525 TFLGVLSACRHAGLVE--EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
T +G+LSAC G ++ + I+ S E G + + +VD+ + G D+A ++
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYAS---ERGFQDDVYVGTALVDMYAKCGSLDNAFRVF 387
Query: 583 AEMPFKPDKTIWASMLKACETHNNTK 608
MP K ++ W +M+ A H +
Sbjct: 388 YGMP-KKNEVSWNAMISALAFHGQAQ 412
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG+ +K G + +++ ++ + F G+ L+ MY L A ++FD M
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K+ V+W M+T Y N AI+L+ M S P+ +L AC+ G LDLG+
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDM-RMSSTAPDQITLIGILSACASIGALDLGK 349
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+ + + D + L+DMY KCGSL + + + N WN+M+S
Sbjct: 350 QVEIYASERGFQDDVYVGTALVDMYAKCGSLD----NAFRVFYGMPKKNEVSWNAMISAL 405
Query: 185 ---GKQVHAFCVKRGFEKE-------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ A + + E D+T ++ + G +D+G LF+ M S
Sbjct: 406 AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS-----S 460
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
G++ SC +VD++S L EA
Sbjct: 461 SFGLVPKIEHYSC-----MVDLFSRAGHLEEA 487
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 306/610 (50%), Gaps = 44/610 (7%)
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
T++ A++ P A L H+L P+GF + ++++A + +H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 132 TREKLEYDTVLMN-TLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG---- 184
R L +V + +L+ Y++ G ++ K+FD+ S +V WN+MLSG
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSER------DVPAWNAMLSGLCRN 147
Query: 185 ---GKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ V F V G + VT++S++ M + G D LAL V +
Sbjct: 148 ARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLG--DQVLAL---------VMHVYAV 196
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+ F +AL+D+Y +L EA+ +F ++ WNS+ISG Q
Sbjct: 197 KHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR------DLVTWNSIISGCEQRGQ 250
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
A+ + + SG+ D T S A + R A +H ++ G+++D I+
Sbjct: 251 TAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ--GGDGRSAKSLHCYVMRRGWDVDDIIA 308
Query: 360 SN-LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI-NSN 417
N ++D+YA+L N+++A +F +P +D V+W+ LI G ++GL + A + M +
Sbjct: 309 GNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEG 368
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
Q SVL S L +L++G ++HA +K G + T LID+Y KCG++ + +
Sbjct: 369 LKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAM 428
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
LF+ MP R W II G G +G EA+ F M Q +KP+ +TF+ +L+AC HAG
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG 488
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV++ + F M+ Y + P +HY CM D+LG+AG D+A I MP KPD +W ++
Sbjct: 489 LVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL 548
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-E 656
L AC H N ++ + ++ L PE+ YV++SN+YA +G WD + +VR ++ +
Sbjct: 549 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQ 608
Query: 657 KKAGMSWIEV 666
K G S IEV
Sbjct: 609 KTPGWSSIEV 618
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 190/474 (40%), Gaps = 103/474 (21%)
Query: 25 LHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
LH ++ GL + +FT +L+ Y F +++A+K+FDEM+ +++ +W M++ N
Sbjct: 89 LHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNA 148
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
R A+ L+ M+ G V + S+VL C L GD L ++H + L+ + +
Sbjct: 149 RAAEAVGLFGRMVGEG-VAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVC 207
Query: 144 NTLLDMYVKCGSLTR---------------------------------KLFD--QYSNWA 168
N L+D+Y K G L K+F + S +
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVS 267
Query: 169 ASAYGNVALWNSMLSGG-----KQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLA 222
V+L +++ GG K +H + ++RG++ +D+ +++DMY K I+
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCF---------------------TLSALVDMYSNCN 261
+F+ MP +D VSW +I G + T +++ YS+
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387
Query: 262 VLCEARK-------------------LFDQYSSWAASAYG----------NVALWNSMIS 292
L + + L D Y+ A + WN++IS
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRF--ALQVHGLIV 348
G ++ EA+TL S + G+ D TF S L AC L++ F +QV IV
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIV 507
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ + D+ R G + A +P K D W L+ C HG
Sbjct: 508 PIAKHY-----ACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHK 59
+ L + A+ G RS KSLHC +++ G DI GN ++ MYA +++ A +
Sbjct: 271 LTLVSLASAIAQGGDGRS---AKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M ++ VSW T++T Y N N A+ Y HM ++ ++ + +VL A S G
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVAL 177
L G +H + L D + L+D+Y KCG L LF++ +
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGP------ 441
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+++SG G A + + G + + VT SL+ G +D G + F+ M
Sbjct: 442 WNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVM 500
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/679 (28%), Positives = 334/679 (49%), Gaps = 62/679 (9%)
Query: 19 IKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+ QG+ H + + GL D+ +L+MY S++ A + FD M +N+VSW+ M+
Sbjct: 57 LSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIA 116
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AY P A+ L+ M ++ V+ N + +VL AC+ + LG+ IHERI + L
Sbjct: 117 AYAQRGHPGDALELFVRM-DHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLL 175
Query: 138 YDTVLM-NTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHA 190
D V++ NT+++MY KCG L R++F++ N WN+M++ + A
Sbjct: 176 GDDVILGNTIVNMYGKCGEVDLAREVFERMEA------KNAVTWNTMIAACSRHDRYKEA 229
Query: 191 FCVK-----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
F + G +TL S+ID I G + ++V+ G+ E
Sbjct: 230 FALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIV------HEIVAGEGL-----ES 278
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALV++Y C L AR + + + W ++++ Y + + AI
Sbjct: 279 DNTVANALVNLYGKCGKLRAARHALEGIETR------DKISWTTLLAAYARHGHGKRAIA 332
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
++ + G+ +DS+TF + L++C+ + ++H + SG ELD ++ + L+D+
Sbjct: 333 VIKRMDHEGVKLDSFTFVNLLESCVAIAALA--LGEEIHDRLAESGIELDPVLQTALVDM 390
Query: 366 YARLGNVKSALELFHRLPK-KDVVAWSGLIMG--CTKHGLNSLAYLLFRDMINSNQDVNQ 422
Y + GN +A F R+ +DV W+ L+ G +L + D
Sbjct: 391 YGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVT 450
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRG-FEKE-----DITLTSLIDMYLKCGEIDDG 476
F+ S+L C+ LA+L G+ H+ ++RG F+++ D+ TS+I+MY KCG + D
Sbjct: 451 FL--SILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADA 508
Query: 477 LALF---KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
A F + DVV+W+ ++ Q G ++EA+ F M Q +KP+ ++F+ ++ C
Sbjct: 509 KAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGC 568
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H+GLV EA FTS++ ++G+ P H+ C+VDLL +AG +AE L+ P +
Sbjct: 569 SHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHST 628
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK 653
W ++L AC T+ + L S S Y +L++V+ WD VR A +
Sbjct: 629 WMTLLSACRTYGD--LERARRVAARLASLRSGSAYSLLASVFCLSRKWDD---VRNARQS 683
Query: 654 LGEK----KAGMSWIEVSS 668
L E+ + G SWIE+++
Sbjct: 684 LVERGFITQPGCSWIEINN 702
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 201/446 (45%), Gaps = 21/446 (4%)
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + V+ +++D + G++ G F+ R V +G+ +A++
Sbjct: 36 GVAPDRVSCIAILDAFASLGDLSQG-EFFH----RTVCEASGL-----GSDVVVATAVLT 85
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
MY+ C + AR+ FD A NV W++MI+ Y +A+ L + G+
Sbjct: 86 MYNRCGSVSHARRAFD------AMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGV 139
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY-ELDYIVGSNLIDLYARLGNVKS 374
++ TF S L AC ++ +H IV G D I+G+ ++++Y + G V
Sbjct: 140 KANAITFVSVLDACASMRAIA--LGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDL 197
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
A E+F R+ K+ V W+ +I C++H A+ L +M N+ + SV+ C+
Sbjct: 198 AREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAW 257
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+ S+ RG+ VH G E ++ +L+++Y KCG++ + + RD +SWT +
Sbjct: 258 MQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTL 317
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
+ ++G K AIA + M +K + TF+ +L +C + I + E G
Sbjct: 318 LAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRL-AESG 376
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK-LVSII 613
+E +VD+ G+ G D A + M D T+W ++L A + K + I
Sbjct: 377 IELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIF 436
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLG 639
A L D ++ + + A+L
Sbjct: 437 ARMSLQGVAPDAVTFLSILDACASLA 462
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 215/530 (40%), Gaps = 107/530 (20%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C R+I GKS+H RI+ G L D+ GN +++MY ++ A ++F+ M
Sbjct: 147 VSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 206
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN V+W TM+ A + + R A L M + + PN +V+ AC+ + GR
Sbjct: 207 AKNAVTWNTMIAACSRHDRYKEAFALLGEM-DLDGLRPNKITLVSVIDACAWMQSIVRGR 265
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL-----------TRKLFDQYSNWAASA-YG 173
++HE + E LE D + N L+++Y KCG L TR + AA A +G
Sbjct: 266 IVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 325
Query: 174 N----VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
+ +A+ M L+ G+++H + G E + V T
Sbjct: 326 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 385
Query: 206 SLIDMYLKCGEIDDGLALFNFMPE-RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLC 264
+L+DMY KCG D F+ M + RDV W +
Sbjct: 386 ALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL-------------------------- 419
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
++ YVL +Q +E + + + + G+ D+ TF S
Sbjct: 420 --------------------------LAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLS 453
Query: 325 ALKACINL----LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF- 379
L AC +L L + + GL ++ +++I++YA+ G++ A F
Sbjct: 454 ILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFA 513
Query: 380 --HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
R DVVAWS ++ ++ GL+ A F M + V +S V + C S
Sbjct: 514 KARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSM--QQEGVKPDSVSFVSAIAGCSHS 571
Query: 438 LRRGKQVHAFCVKR---GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+ V F R G + L+D+ + G I + AL + P
Sbjct: 572 GLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAP 621
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 37/413 (8%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C +SI +G+ +H + GL D N L+++Y L A + +
Sbjct: 248 LVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIE 307
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ +SWTT++ AY + AI + M ++ V+ + F + +L++C L LG
Sbjct: 308 TRDKISWTTLLAAYARHGHGKRAIAVIKRM-DHEGVKLDSFTFVNLLESCVAIAALALGE 366
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLS 183
IH+R+ +E D VL L+DMY KCG+ R+ FD+ S+ +V +WN++L+
Sbjct: 367 EIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSD-----VRDVTVWNALLA 421
Query: 184 G------GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
GK+ + +G + VT S++D + G + M ER +
Sbjct: 422 AYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFD 481
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ + +++++MY+ C L +A+ F + AS +V W++M++ Y
Sbjct: 482 RQAV-----ASADLLTTSVINMYAKCGSLADAKAEFAKARRARAS---DVVAWSAMVAAY 533
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQV---HGLIVT 349
+EEA+ + G+ DS +F SA+ C + L+ F + HG+ T
Sbjct: 534 SQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPT 593
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ + L+DL +R G ++ A L R P W L+ C +G
Sbjct: 594 EAH------FACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYG 640
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 39/311 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D V L C ++ G+ +H R+ + G+ D L+ MY + + A +
Sbjct: 344 LDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRA 403
Query: 61 FDEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
FD M+ +++ W ++ AY + + ++ M G V P+ + ++L AC+
Sbjct: 404 FDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQG-VAPDAVTFLSILDACASLA 462
Query: 120 DLDLGRLIHERI------TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG 173
L LGRL H R+ R+ + +L ++++MY KCGSL +++ +
Sbjct: 463 ALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLA-DAKAEFAKARRARAS 521
Query: 174 NVALWNSMLSGGKQ-------VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
+V W++M++ Q + F + G + + V+ S I G + + +A F
Sbjct: 522 DVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFF 581
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ------YSSW-- 276
+ ++ T C LVD+ S + EA L + +S+W
Sbjct: 582 TSLRHDHGIAPTEAHFAC----------LVDLLSRAGWIREAEALMRRAPLGAHHSTWMT 631
Query: 277 ---AASAYGNV 284
A YG++
Sbjct: 632 LLSACRTYGDL 642
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 198/682 (29%), Positives = 334/682 (48%), Gaps = 73/682 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++I T N+++S YA + +A +LFD M ++N+VSW +M+ Y N+ A RL++ M
Sbjct: 44 RNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRM 103
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ + + ++ ++ + G+L+ R + + ++ DTV N L+ Y K
Sbjct: 104 FKR-----DIYSWTLMITCYTRIGELEKARELFNLLPDKQ---DTVCRNALIAGYAKKRL 155
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLI 208
+KLFD+ NV WNS+LSG + + F E+ V+ ++
Sbjct: 156 FREAKKLFDEM------LVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMV 209
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFT----------------LSA 252
D Y+ G++D F +P +VVSW ++ G T +A
Sbjct: 210 DGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNA 269
Query: 253 LVDMYSNCNVLCEARKLFDQYS-----SWAAS--------------------AYGNVALW 287
++ Y N + +A KLF + SW A Y N+A
Sbjct: 270 MIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQ 329
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MI+GY+ + + +EA + S I DS + S + + + AL++ +
Sbjct: 330 TAMINGYLQSGRMDEANEIFSQISVR----DSVCWNSMITGYAHCGRTDE--ALRLFQEM 383
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
V D + + +I YA+ G + ALE+F+ + +++VV+W+ LI G ++GL A
Sbjct: 384 VCK----DMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEAL 439
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
F M + +Q I L+ + LA+L G Q+H +K GF + +++ MY
Sbjct: 440 NCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMY 499
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
K G + + +F + +DVVSW +I G NG KEA+ F+ M + P+E+TF
Sbjct: 500 AKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFT 559
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
G+LSAC H G V++ +F SM Y ++P EHY C+++LLG+ G ++A +++ M
Sbjct: 560 GLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKT 619
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
IW ++L AC H+N +L AE+LLA P++ S YV+LSN++A G WD + +V
Sbjct: 620 VSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERV 679
Query: 648 RKAGKK-LGEKKAGMSWIEVSS 668
R K+ EK+ G SWIE+ +
Sbjct: 680 RVLMKENKAEKQPGCSWIEIDN 701
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 209/532 (39%), Gaps = 137/532 (25%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------- 244
E+ VT S+I Y K G I + LF+ MP+R++VSW +I G
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 245 ------------CSCFT-----------------------LSALVDMYSNCNVLCEARKL 269
+C+T +AL+ Y+ + EA+KL
Sbjct: 103 MFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKL 162
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS-----HIHSSGMCIDSYTFTS 324
FD+ NV WNS++SGY N + + + ++ S + +D Y
Sbjct: 163 FDEM------LVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVG 216
Query: 325 ALKAC---------INLLNFNSRFALQVHGLIVTSGYEL-------DYIVGSNLIDLYAR 368
L + N++++ + + H +T L + + + +I Y R
Sbjct: 217 DLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVR 276
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG--------LNSLAY-------LLFRDM 413
+ A +LF +P+KD V+W+ +I G + G LN + Y +
Sbjct: 277 ENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGY 336
Query: 414 INSNQ--DVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-----RGFE----KEDITLTS 462
+ S + + N+ ++ C S+ G +A C + R F+ K+ ++ +
Sbjct: 337 LQSGRMDEANEIFSQISVRDSVCWNSMITG---YAHCGRTDEALRLFQEMVCKDMVSWNT 393
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
+I Y + G++D L +F M ER+VVSW +I G QNG EA+ F M Q KP+
Sbjct: 394 MIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPD 453
Query: 523 EITFLGVLSACR-----HAGLVEEAWTIFT-------------SMKPEYGLEPHLEHYYC 564
+ T + L A + G+ TI T +M + G P E+ +
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 565 MVD----------LLGQA--GCFDDAEQLIAEMPFK---PDKTIWASMLKAC 601
+ + G A GC +A +L MP + PD+ + +L AC
Sbjct: 514 EIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D IV LR ++ G LH IK G D+F N +L+MYA + +A +F
Sbjct: 453 DQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVF 512
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
E+ K++VSW +++ Y N A+ L+ M G + P+ ++ +L AC+ G +
Sbjct: 513 AEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGII-PDEVTFTGLLSACNHGGFV 571
Query: 122 DLGRLIHERIT 132
D G + + +T
Sbjct: 572 DQGLNLFKSMT 582
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 17/190 (8%)
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
++ + L++ S R + V F + E+ +T S+I Y K G I + LF
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFL--KMTERNIVTYNSMISAYAKNGRIANARELFDL 71
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
MP+R++VSW +I G N ++A F M K + ++ +++ G +E+A
Sbjct: 72 MPQRNLVSWNSMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKA 127
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLL---GQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+F L P + C L+ + F +A++L EM K + W S+L
Sbjct: 128 RELFN-------LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVK-NVVSWNSILS 179
Query: 600 ACETHNNTKL 609
+ +L
Sbjct: 180 GYTKNGKMQL 189
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 237/420 (56%), Gaps = 11/420 (2%)
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+L+ MY+ C + +ARK+FD+ S ++ WNSMISGY EA+ L +
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQ------KDLVSWNSMISGYSKMRHAGEAVGLFREMM 220
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+G + + S L AC L + + V +V + L+Y +GS LI +Y + G+
Sbjct: 221 EAGFQPNEMSLVSVLGACGELGDL--KLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGD 278
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA +F + KKD V W+ +I G ++G++ A LF+DM S+ +Q + +L
Sbjct: 279 LVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSA 338
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ + +L GKQV + +RGF+ + T+L+DMY KCG +D+ +F MP ++ VSW
Sbjct: 339 CASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSW 398
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQS--RLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+I +G+A+EA+A F+ M+ + PN+ITF+GVLSAC HAGLV+E +F M
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+GL P +EHY CMVDL +AG ++A + MP KPD+ I ++L AC+ N +
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDI 518
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+ + LL P + YV+ S +YA L WD +++R K+ G K G SWI+++S
Sbjct: 519 SERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINS 578
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 45/498 (9%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SIKQ K +H ++ L+ I N+ L AD A F + S+ M+
Sbjct: 44 SIKQLKQIHAQL----LTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 78 AY-TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T+ + + A+ Y+ M ++ ++PN Y + ACS ++ GR+ H + R L
Sbjct: 100 GLSTAWNKSSLALEFYSRM-KFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGL 158
Query: 137 EYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQ 187
+ D + ++L+ MY +CG + RK+FD+ S ++ WNSM+SG G+
Sbjct: 159 DEDGHVSHSLITMYARCGKMGDARKVFDEISQ------KDLVSWNSMISGYSKMRHAGEA 212
Query: 188 VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V F ++ GF+ +++L S++ CGE+ D L L ++ E ++
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLG---ACGELGD-LKLGTWVEEF-------VVENKMTL 261
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ F SAL+ MY C L AR++FD + WN+MI+GY N +EEAI
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKK------KDKVTWNAMITGYAQNGMSEEAIK 315
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + S D T L AC ++ + QV G++ D VG+ L+D+
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALD--LGKQVEIYASERGFQDDVYVGTALVDM 373
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQF 423
YA+ G++ +A +F+ +P K+ V+W+ +I HG A LF+ M+N V N
Sbjct: 374 YAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 424 IISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
VL C + G+++ H G + + ++D++ + G +++
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMT 493
Query: 483 MPERDVVSWTGIIVGCGQ 500
MPE+ G ++G Q
Sbjct: 494 MPEKPDEVILGALLGACQ 511
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 184/448 (41%), Gaps = 133/448 (29%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++ G+ HC +I+ GL +D ++L++MYA + DA K+FDE+++K++VSW
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSW 196
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M++ Y+ + A+ L+ M+E G +PN +VL AC GDL LG + E +
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAG-FQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG------ 184
K+ + + + L+ MY KCG L R++FD + WN+M++G
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK------KDKVTWNAMITGYAQNGM 309
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GKQV + +RGF+ + T+
Sbjct: 310 SEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTA 369
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+DMY KCG +D+ +F MP ++ VSW +I
Sbjct: 370 LVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMI--------------------------- 402
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFTS 324
S + Q +EA+ L + + G + + TF
Sbjct: 403 -------------------------SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVG 437
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNV 372
L AC VH +V G L +++ S+ ++DL++R G++
Sbjct: 438 VLSAC-------------VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 373 KSALELFHRLPKK-DVVAWSGLIMGCTK 399
+ A + +P+K D V L+ C K
Sbjct: 485 EEAWDFVMTMPEKPDEVILGALLGACQK 512
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 163/329 (49%), Gaps = 14/329 (4%)
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSN 361
A+ S + G+ ++ T+ AC NLL N R H ++ G + D V +
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMG---HCSVIRRGLDEDGHVSHS 167
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LI +YAR G + A ++F + +KD+V+W+ +I G +K A LFR+M+ + N
Sbjct: 168 LITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPN 227
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ + SVL C L L+ G V F V+ ++LI MY KCG++ +F
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE- 540
M ++D V+W +I G QNG ++EAI FQ+M S P++IT +G+LSAC G ++
Sbjct: 288 SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 347
Query: 541 -EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
+ I+ S E G + + +VD+ + G D+A ++ MP K ++ W +M+
Sbjct: 348 GKQVEIYAS---ERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNK-NEVSWNAMIS 403
Query: 600 ACETHNNTKLVSIIAEQLL----ATSPED 624
A H + + + ++ SP D
Sbjct: 404 ALAFHGQAQEALALFKSMMNEGGTVSPND 432
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG+ +K G + +++ ++ + F G+ L+ MY L A ++FD M
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K+ V+W M+T Y N AI+L+ M S P+ +L AC+ G LDLG+
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDM-RMSSTAPDQITLIGILSACASIGALDLGK 349
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+ + + D + L+DMY KCGSL + + + N WN+M+S
Sbjct: 350 QVEIYASERGFQDDVYVGTALVDMYAKCGSLD----NAFRVFYGMPNKNEVSWNAMISAL 405
Query: 185 ---GKQVHAFCVKRGFEKE-------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+ A + + E D+T ++ + G +D+G LF+ M S
Sbjct: 406 AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS-----S 460
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
G++ SC +VD++S L EA
Sbjct: 461 SFGLVPKIEHYSC-----MVDLFSRAGHLEEA 487
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 286/575 (49%), Gaps = 37/575 (6%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS 165
F S +++ C+LS DL + + + + NTL+ + + T L
Sbjct: 58 FAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQ 117
Query: 166 NWAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
+ Y N + S+ KQ+HA +K TSLI MY + GE
Sbjct: 118 MLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGE 177
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
+ +F+ RD VS+T +I G + VD +AR+LFD+ +
Sbjct: 178 LRHARLVFDKSTLRDAVSFTALITG------YVSEGHVD---------DARRLFDEIPA- 221
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+V WN+MI+GYV + + EEA+ + + + + + T S L AC +L +
Sbjct: 222 -----KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSL- 275
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
+ + G+ + + + L+D+Y++ G + +A +LF + KDV+ W+ +I G
Sbjct: 276 -ELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC---VKRGF 453
L A +LF M+ N N +VL C+ L +L GK VHA+ +K
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 454 EKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+++L TS+I MY KCG ++ +F+ M R + SW +I G NG A+ A+ F+
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
EMI +P++ITF+GVLSAC AG VE F+SM +YG+ P L+HY CM+DLL ++
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G FD+A+ L+ M +PD IW S+L AC H + +AE+L PE+ YV+LS
Sbjct: 515 GKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLS 574
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
N+YA G WD ++K+R G KK G + IE+
Sbjct: 575 NIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEI 609
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 235/548 (42%), Gaps = 58/548 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARK 67
L C S+KQ +H IIK GL +F + L+ A S L+ A LF + +
Sbjct: 32 LAKCPDIPSLKQ---IHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88
Query: 68 --NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
NI W T++ A++ P ++ L++ ML G + PN + ++ K+C+ S +
Sbjct: 89 PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSG-LYPNSHTFPSLFKSCAKSKATHEAK 147
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H + L + +L+ MY + G L R +FD+ + A ++ AL +S
Sbjct: 148 QLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSF--TALITGYVS 205
Query: 184 GGKQVHAFCVKRGFE----KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSW 235
G H +R F+ K+ V+ ++I Y++ G ++ LA F M E DV +
Sbjct: 206 EG---HVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTM 262
Query: 236 TGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSS 275
++ C L +ALVDMYS C + ARKLFD
Sbjct: 263 VSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED 322
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL--L 333
+V LWN+MI GY EEA+ L + + + TF + L AC +L L
Sbjct: 323 ------KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL 376
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ + + +G + + +++I +YA+ G V+ A ++F + + + +W+ +
Sbjct: 377 DLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAM 436
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-G 452
I G +G A LF +MIN + VL C+ + G + + K G
Sbjct: 437 ISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYG 496
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+ +ID+ + G+ D+ L M E D W ++ C +G+ + F
Sbjct: 497 ISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE-----F 551
Query: 512 QEMIQSRL 519
E + RL
Sbjct: 552 GEYVAERL 559
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYA--RLGNVKSALELFHRLPKK--DVVAWSGLIMGC 397
Q+H LI+ SG S LI+ A ++ AL LFH + + ++ W+ LI
Sbjct: 43 QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ + + LF M++S N S+ K C+ + KQ+HA +K
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162
Query: 458 ITLTSLIDMYLKCGE-------------------------------IDDGLALFKFMPER 486
TSLI MY + GE +DD LF +P +
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
DVVSW +I G Q+GR +EA+A F M ++ + PN+ T + VLSAC H +E I
Sbjct: 223 DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIG 282
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ ++ + G +L+ +VD+ + G A +L M K D +W +M+
Sbjct: 283 SWVR-DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK-DVILWNTMI 332
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG RS++ GK + + G +++ N L+ MY+ + A KLFD M
Sbjct: 262 MVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME 321
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++ W TM+ Y A+ L+ ML +V PN + AVL AC+ G LDLG+
Sbjct: 322 DKDVILWNTMIGGYCHLSLYEEALVLFEVMLRE-NVTPNDVTFLAVLPACASLGALDLGK 380
Query: 126 LIHERITREKLEYDTV----LMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWN 179
+H I + V L +++ MY KCG + ++F + + +A WN
Sbjct: 381 WVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS------LASWN 434
Query: 180 SMLSG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+M+SG G A + GF+ +D+T ++ + G ++ G F+ M
Sbjct: 435 AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM 491
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 316/642 (49%), Gaps = 49/642 (7%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MYA S DA FD + ++N+ SWT +V A+ + + +R M + G V P+
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAV 59
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY 164
+ L +C L G IH+ + +LE D + N LL+MY KCGSL+ +++F +
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHA----------FCVKRGFEKEDVTLTSLIDMYLKC 214
NV W S+++G +H F + G + + +++
Sbjct: 120 ER-----TRNVISW-SIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 173
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
+ DG + + I + FE +A++ MY C + EARK+FD
Sbjct: 174 ALVQDGRMIH-----------SCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMD 222
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
A +V WN M+S YV N++ ++AI L + + D T+ S L AC + +
Sbjct: 223 E----ALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAED 275
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+H IV E + IVG+ L+ +YA+ G+ A +F ++ ++ +++W+ +I
Sbjct: 276 VG--LGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII 333
Query: 395 MGCTKHGLNSLAYLLFRDMIN-----SNQDV--NQFIISSVLKVCSCLASLRRGKQVHAF 447
+ L + A LF+ M+ S+Q V + ++L C+ +++L +GK V
Sbjct: 334 SAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ 393
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKE 506
G + T+++++Y KCGEI++ +F + R DV W +I Q G++ E
Sbjct: 394 AASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHE 453
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY-GLEPHLEHYYCM 565
A+ F M ++P+ +F+ +L AC H GL ++ + FTSM EY + ++H+ C+
Sbjct: 454 ALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCV 513
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
DLLG+ G +AE+ + ++P KPD W S+L AC H + K +A +LL P
Sbjct: 514 ADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA 573
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
+ YV LSN+YA L W +++KVRK + G KK G+S IE+
Sbjct: 574 TGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEI 615
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 223/567 (39%), Gaps = 108/567 (19%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
+ AL CG S++ G +H ++ L D N LL+MY SL+ A ++F +M R
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121
Query: 67 -KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N++SW+ M A+ + A+R + ML G M + +L ACS + GR
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVT-ILSACSSPALVQDGR 180
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+IH I E + ++ N ++ MY +CG++ RK+FD A +V WN MLS
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE----ALRDVVSWNIMLS 236
Query: 184 G-----------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ +H V EK +
Sbjct: 237 TYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+ MY KCG + A+F+ M +R ++SWT II Y +
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII---------------SAYVRRRL 341
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ EA LF Q + L + S + D+ F
Sbjct: 342 VAEACHLFQQM------------------------------LELEKNGSSQRVKPDALAF 371
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L AC ++ V + G D VG+ +++LY + G ++ A +F +
Sbjct: 372 VTILNACADVSALEQ--GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAV 429
Query: 383 -PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ DV W+ +I + G + A LF M + F S+L CS +G
Sbjct: 430 CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG 489
Query: 442 KQVHAFCVKRGFEKEDITLT-----SLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGII 495
K ++ E ++T T + D+ + G + + + +P + D V+WT ++
Sbjct: 490 K---SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 546
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPN 522
C + K A +++ RL+P
Sbjct: 547 AACRNHRDLKRAKEVANKLL--RLEPR 571
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 255/485 (52%), Gaps = 26/485 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ+HA +K TS+I MY GE+D +F+ RD VS+T +I G
Sbjct: 150 GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS 209
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
C L +AR+LFD+ +V WN+MISGYV + + EEAI
Sbjct: 210 QGC---------------LDDARRLFDEI------PVKDVVSWNAMISGYVQSGRFEEAI 248
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + + + T L AC + + + + +G+ + + + LID
Sbjct: 249 VCFYEMQEANVLPNKSTMVVVLSACGH--TRSGELGKWIGSWVRDNGFGSNLQLTNALID 306
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + G A ELF + +KDV++W+ +I G + L A LF M+ SN N
Sbjct: 307 MYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVT 366
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFM 483
+L C+CL +L GK VHA+ K + +L TSLIDMY KCG I+ +F+ M
Sbjct: 367 FLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM 426
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL-KPNEITFLGVLSACRHAGLVEEA 542
R++ SW ++ G +G A+ A+A F EM+ L +P++ITF+GVLSAC AGLV+
Sbjct: 427 HSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLG 486
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F SM +YG+ P L+HY CM+DLL +A F++AE L+ M +PD IW S+L AC+
Sbjct: 487 HQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACK 546
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H + +AE+L PE+ +V+LSN+YA G WD ++++R G KK G
Sbjct: 547 AHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGC 606
Query: 662 SWIEV 666
+ IE+
Sbjct: 607 TSIEI 611
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 162/356 (45%), Gaps = 32/356 (8%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN----------- 331
NV +WNS+I GY L+ ++ L S + G+ +S+TF K+C
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154
Query: 332 ------LLNFNSRFALQVHGLIVTSGYELDY-------------IVGSNLIDLYARLGNV 372
L+FN V + + G E+D+ + + LI Y G +
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVG-EMDFARLVFDKSSLRDAVSFTALITGYVSQGCL 213
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A LF +P KDVV+W+ +I G + G A + F +M +N N+ + VL C
Sbjct: 214 DDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSAC 273
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S GK + ++ GF +LIDMY KCGE D LF + E+DV+SW
Sbjct: 274 GHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWN 333
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G +EA+A F+ M++S +KPN++TFLG+L AC G ++ + +
Sbjct: 334 TMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKN 393
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
+ + ++D+ + GC + AE++ M + + W +ML H + +
Sbjct: 394 LRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAE 448
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 197/521 (37%), Gaps = 146/521 (28%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDE---MARKNIVS 71
++I K +H IIK GL+ +F + L+ A S L+ A LF+E + N+
Sbjct: 39 KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFI 98
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
W +++ Y+ + P ++ L++ ML YG V+PN + + K+C+ + G+ +H
Sbjct: 99 WNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHTFPFLFKSCTKAKATHEGKQLHAHA 157
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAY----------------- 172
+ L ++ + +++ MY G + R +FD+ S A ++
Sbjct: 158 LKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDAR 217
Query: 173 --------GNVALWNSMLSG---------------------------------------- 184
+V WN+M+SG
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
GK + ++ GF +LIDMY KCGE D LF+ + E+DV+SW +I
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337
Query: 241 G------------CFE--------------------CSCFTL------------------ 250
G FE C+C
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS 397
Query: 251 ------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
++L+DMY+ C + A ++F S N+A WN+M+SG+ ++ E A+
Sbjct: 398 SNASLWTSLIDMYAKCGCIEAAERVFRSMHS------RNLASWNAMLSGFAMHGHAERAL 451
Query: 305 TLLSHIHSSGMC-IDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
L S + + G+ D TF L AC L++ ++ +I G
Sbjct: 452 ALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQY---FRSMIQDYGISPKLQHYGC 508
Query: 362 LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+IDL AR + A L + + D W L+ C HG
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 122/310 (39%), Gaps = 85/310 (27%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-----DFTS----------- 53
+ C + ++ +GK LH +K L + +++ MYA DF
Sbjct: 138 FKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDA 197
Query: 54 ---------------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
L+DA +LFDE+ K++VSW M++ Y + R AI + M E
Sbjct: 198 VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE- 256
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--L 156
+V PN VL AC + +LG+ I + + L N L+DMY KCG +
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
R+LFD +V WN+M+ G
Sbjct: 317 ARELFDGIEE------KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGI 370
Query: 185 ------------GKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERD 231
GK VHA+ K + +L TSLIDMY KCG I+ +F M R+
Sbjct: 371 LHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRN 430
Query: 232 VVSWTGIIVG 241
+ SW ++ G
Sbjct: 431 LASWNAMLSG 440
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 145/326 (44%), Gaps = 30/326 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CG RS + GK + + G ++ N L+ MY + A +LFD +
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE 325
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+++SW TM+ Y+ A+ L+ ML +V+PN + +L AC+ G LDLG+
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLR-SNVKPNDVTFLGILHACACLGALDLGK 384
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
+H I + + + L +L+DMY KCG + ++F + N+A WN+ML
Sbjct: 385 WVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHS------RNLASWNAML 438
Query: 183 SG----GKQVHAFC-----VKRG-FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
SG G A V +G F +D+T ++ + G +D G F M +
Sbjct: 439 SGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYG 498
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW-----AASAYGNVALW 287
+S GC L A + + +L + ++ + W A A+G V
Sbjct: 499 ISPKLQHYGCM----IDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFG 554
Query: 288 NSMISG-YVLNEQNEEAITLLSHIHS 312
+ + L +N A LLS+I++
Sbjct: 555 EYVAERLFQLEPENAGAFVLLSNIYA 580
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA--RLGNVKS 374
++ + + + L+ C N+ F Q+H LI+ +G V S LI A G++
Sbjct: 26 LEQHPYLNLLEKCKNINTFK-----QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSY 80
Query: 375 ALELF---HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
AL LF + K +V W+ LI G + + LF M+ N + K
Sbjct: 81 ALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKS 140
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE------------------- 472
C+ + GKQ+HA +K TS+I MY GE
Sbjct: 141 CTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF 200
Query: 473 ------------IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+DD LF +P +DVVSW +I G Q+GR +EAI F EM ++ +
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
PN+ T + VLSAC H E I + ++ + G +L+ ++D+ + G D A +
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVR-DNGFGSNLQLTNALIDMYCKCGETDIARE 319
Query: 581 LIAEMPFKPDKTIWASML 598
L + K D W +M+
Sbjct: 320 LFDGIEEK-DVISWNTMI 336
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 270/520 (51%), Gaps = 54/520 (10%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS----------- 246
E V T+LI Y G + LFN +PERDVV+WT +IVG C+
Sbjct: 40 EGPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSE 99
Query: 247 ---------CFTLSALVDMYS-----NCNVLCEA--------------RKLFDQYSSWAA 278
FT+S+++ +C L + L D Y++ A
Sbjct: 100 MLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCA 159
Query: 279 ------SAYGNVAL-----WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
S + ++ L W ++I+G+ + + + +S++F+ A +
Sbjct: 160 TMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAAR 219
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC ++ +++ Q+H + G D V ++++D+Y R + A F L +K++
Sbjct: 220 ACASISSYSC--GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
+ W+ LI G + +S + LF M + N F +S+ C+ LA L G+QVH
Sbjct: 278 ITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
V+RGF+K + SLIDMY KCG I D LF MP RD+VSWT +++G G +G KEA
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F EM+QS ++P+ I F+GVL C HAGLV++ F SM +Y + P E Y C+VD
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVD 456
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG ++A QL+ MPF+PD+++W ++L AC+ + + L ++ A+++L P
Sbjct: 457 LLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGT 516
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
Y++LS +YA G W +K+RK K + +KK G SWIE+
Sbjct: 517 YLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEI 556
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 185/464 (39%), Gaps = 119/464 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-DFTSLNDAHKLFDEMARKN 68
L+ C +++ G H K+G+ + ++ N LL MYA +++DA +F+++ K
Sbjct: 116 LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKT 175
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSWTT++ +T + + ML V PN F +S +AC+ G+ IH
Sbjct: 176 AVSWTTLIAGFTHRGDGYSGLLAFRQML-LEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+T+ L D +MN++LDMY +C L ++ F + + N+ WN++++G
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTE------KNLITWNTLIAGYE 288
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+QVH V+RGF+K
Sbjct: 289 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVAL 348
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ SLIDMY KCG I D LF MP RD+VSWT +++G
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIG---------------------- 386
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ A YG +EA+ L + SG+ D F
Sbjct: 387 ------------YGAHGYG------------------KEAVKLFDEMVQSGIQPDRIVFM 416
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALE 377
L C S L GL DY + + ++DL R G V+ A +
Sbjct: 417 GVLCGC-------SHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L +P + D W L+ C + L++L L + +++ ++
Sbjct: 470 LVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNM 513
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 44/276 (15%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A R C S GK +H + KYGL D N++L MY L DA + F E+ KN
Sbjct: 217 AARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKN 276
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+++W T++ Y + ++ L+ M G +PN F ++++ AC+ L G+ +H
Sbjct: 277 LITWNTLIAGYERSDSSE-SLSLFFQMGSEG-YKPNCFTFTSITAACANLAVLSCGQQVH 334
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF------DQYS------NWAASAYGN 174
I R + + L+N+L+DMY KCGS+ + KLF D S + A YG
Sbjct: 335 GGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGK 394
Query: 175 --VALWNSMLSGGKQV-------------HAFCVKRGFEK-----EDVTLTS-------L 207
V L++ M+ G Q HA V +G + ED + +
Sbjct: 395 EAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCV 454
Query: 208 IDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+D+ + G +++ L MP E D W ++ C
Sbjct: 455 VDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC 490
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 255/509 (50%), Gaps = 54/509 (10%)
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE---------------------- 244
+++ Y+KCG + GL LF+ MPER+VVSW+ II G +
Sbjct: 256 VLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMP 315
Query: 245 -------------------CSCFTLSALVDMYSNCNV---------LCEARKLFDQYSSW 276
CS + +V + NV L KL + +
Sbjct: 316 NEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVF 375
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ + WN+M++GY L E ++ + D++TF S L L F
Sbjct: 376 ESCLSKDTVSWNAMMAGY-LQLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEF- 433
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
R LQVHG +V SGY D VG++L D+Y + + + F + DV +W+ + G
Sbjct: 434 -RLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAG 492
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C + G A + +M N +N+F +++ L C+ LAS+ GK+ H +K G + +
Sbjct: 493 CLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVD 552
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+L+DMY KCG + +F+ M ER VVSWT +I+G NG+ KEA+ F EM +
Sbjct: 553 VCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRK 612
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+PN ITF+ VL+AC G ++EAW F+SM ++G+ P +HY CMV+LLG+AGC
Sbjct: 613 GEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIK 672
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+AE LI +MPF+P +W ++L AC H + + AE L DPS Y++LSN++A
Sbjct: 673 EAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFA 732
Query: 637 TLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
WDS+ +R+ + KK G SW+
Sbjct: 733 GGDNWDSVGILRELMETRDVKKVPGSSWM 761
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 192/501 (38%), Gaps = 124/501 (24%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L+ C + G ++H + +K L +F N++L+ Y L+ +LFDEM
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPE 278
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+VSW+ ++ + + RPN A+ L+ M G++ PN F + L ACSL+ L
Sbjct: 279 RNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQ 338
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I+ I R + LMN L ++ KL + + + + WN+M++G
Sbjct: 339 IYAFIVRLGYGSNVFLMNAFLTALIR----HEKLLEALEVFESCLSKDTVSWNAMMAGYL 394
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G QVH VK G+ +
Sbjct: 395 QLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICV 454
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------ 245
SL DMY+K ++ DG F+ M DV SWT + GC +C
Sbjct: 455 GNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGV 514
Query: 246 ------------SCFTLS-------------------------ALVDMYSNCNVLCEARK 268
SC L+ AL+DMY+ C + A
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F + V W +MI G+ N Q +EA+ + + + TF L A
Sbjct: 575 VFRSMDERS------VVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Query: 329 CIN--LLN-----FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
C ++ F+S A HG+ + + Y+ +++L R G +K A +L +
Sbjct: 629 CSQGGFIDEAWKYFSSMSA--DHGIAPSEDH---YVC---MVNLLGRAGCIKEAEDLILQ 680
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+P + + W L+ C HG
Sbjct: 681 MPFQPGSLVWQTLLGACLVHG 701
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ AL C SI++GK H IK G D+ N LL MYA + A+ +F M
Sbjct: 521 LATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMD 580
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+++VSWTTM+ + N + A+++++ M + G EPN + VL ACS G +D
Sbjct: 581 ERSVVSWTTMIMGFAHNGQTKEALQIFDEMRK-GEAEPNHITFICVLNACSQGGFID 636
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 202/693 (29%), Positives = 314/693 (45%), Gaps = 136/693 (19%)
Query: 8 EALRHCGQRRS---IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
++LRH + S + RI + D + N +S + +A K+FDEM
Sbjct: 18 QSLRHLNRSFSSLKTPNPSKITTRIPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEM 77
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
R++ VS+ +M+T Y NK DL
Sbjct: 78 PRRDAVSYASMITVYLKNK------------------------------------DLPQA 101
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
++ RE E + V + ++ YV+ G L R++FDQ NV W S++
Sbjct: 102 EILF----REIPERNVVADSAMISGYVRAGRLDKARQVFDQM------VERNVFSWTSLV 151
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
SG Y K G +D+ + LFN MPE++VVSWT +VG
Sbjct: 152 SG--------------------------YFKIGNVDEAMRLFNQMPEKNVVSWTTAVVG- 184
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y+ + EAR +F+Q N+ W +M+ YV N++ +E
Sbjct: 185 --------------YAQNGFIDEARDIFNQMPE------KNIIAWTAMVKSYVENDEIDE 224
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--------------QVHGLIV 348
A L + + Y++ + CIN N L V GL
Sbjct: 225 AFELFYQMPQRNL----YSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLAR 280
Query: 349 TSGYEL-----------DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
EL D + +I Y G++ A LF+ +P+K++V+W+ LI G
Sbjct: 281 NGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGY 340
Query: 398 TKHGL--NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
++G NSL YL+ M+ SN N+ I+SVL C + L Q H + GFE+
Sbjct: 341 ARNGPESNSLRYLIL--MLRSNFKPNETTITSVLTACDSILEL---MQAHGLVIHLGFEQ 395
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ + L+ Y +CG++ +F + +D+VSWT +I+ +G A+ F M+
Sbjct: 396 DKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARML 455
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S KP+ ITF+G+LSAC HAGLV++ +F SM YG+EP EHY C+VD+LG+AG
Sbjct: 456 RSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEM 515
Query: 576 DDAEQLIAEM-PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+ A ++++EM P + D + ++L AC H + L + I E+L+ P YV+L+N
Sbjct: 516 NKAMKVVSEMPPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANA 575
Query: 635 YATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
YA G W+ ++VRK K+ KK G S IEV
Sbjct: 576 YAACGKWNEFAEVRKEMKERNVKKEPGFSQIEV 608
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 270/520 (51%), Gaps = 54/520 (10%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS----------- 246
E V T+LI Y G + LFN +PERDVV+WT +IVG C+
Sbjct: 40 EGPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSE 99
Query: 247 ---------CFTLSALVDMYS-----NCNVLCEA--------------RKLFDQYSSWAA 278
FT+S+++ +C L + L D Y++ A
Sbjct: 100 MLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCA 159
Query: 279 ------SAYGNVAL-----WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
S + ++ L W ++I+G+ + + + +S++F+ A +
Sbjct: 160 TMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAAR 219
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
AC ++ +++ Q+H + G D V ++++D+Y R + A F L +K++
Sbjct: 220 ACASISSYSC--GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
+ W+ LI G + +S + LF M + N F +S+ C+ LA L G+QVH
Sbjct: 278 ITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
V+RGF+K + SLIDMY KCG I D LF MP RD+VSWT +++G G +G KEA
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F EM+QS ++P+ I F+GVL C HAGLV++ F SM +Y + P E Y C+VD
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVD 456
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG ++A QL+ MPF+PD+++W ++L AC+ + + L ++ A+++L P
Sbjct: 457 LLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGT 516
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
Y++LS +YA G W +K+RK K + +KK G SWIE+
Sbjct: 517 YLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEI 556
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 185/464 (39%), Gaps = 119/464 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-DFTSLNDAHKLFDEMARKN 68
L+ C +++ G H K+G+ + ++ N LL MYA +++DA +F+++ K
Sbjct: 116 LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKT 175
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
VSWTT++ +T + + ML V PN F +S +AC+ G+ IH
Sbjct: 176 AVSWTTLIAGFTHRGDGYSGLLAFRQML-LEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+T+ L D +MN++LDMY +C L ++ F + + N+ WN++++G
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTE------KNLITWNTLIAGYE 288
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+QVH V+RGF+K
Sbjct: 289 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVAL 348
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ SLIDMY KCG I D LF MP RD+VSWT +++G
Sbjct: 349 INSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIG---------------------- 386
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ A YG +EA+ L + SG+ D F
Sbjct: 387 ------------YGAHGYG------------------KEAVKLFDEMVQSGIQPDRIVFM 416
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALE 377
L C S L GL DY + + ++DL R G V+ A +
Sbjct: 417 GVLCGC-------SHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L +P + D W L+ C + L++L L + +++ ++
Sbjct: 470 LVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNM 513
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 44/276 (15%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A R C S GK +H + KYGL D N++L MY L DA + F E+ KN
Sbjct: 217 AARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKN 276
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+++W T++ Y + ++ L+ M G +PN F ++++ AC+ L G+ +H
Sbjct: 277 LITWNTLIAGYERSDSSE-SLSLFFQMGSEG-YKPNCFTFTSITAACANLAVLSCGQQVH 334
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF------DQYS------NWAASAYGN 174
I R + + L+N+L+DMY KCGS+ + KLF D S + A YG
Sbjct: 335 GGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGK 394
Query: 175 --VALWNSMLSGGKQV-------------HAFCVKRGFEK-----EDVTLTS-------L 207
V L++ M+ G Q HA V +G + ED + +
Sbjct: 395 EAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCV 454
Query: 208 IDMYLKCGEIDDGLALFNFMP-ERDVVSWTGIIVGC 242
+D+ + G +++ L MP E D W ++ C
Sbjct: 455 VDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC 490
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 278/502 (55%), Gaps = 41/502 (8%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALF------NFMPERDVVSWTGIIVGCFECSCFTLS 251
E+ VT T +I + + G D + LF ++P+R +++ ++ C E L
Sbjct: 18 ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR--FTYSSVLSACTELGLLALG 75
Query: 252 --------------------ALVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWN 288
+LVDMY+ C + ++RK+F+Q NV W
Sbjct: 76 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH------NVMSWT 129
Query: 289 SMISGYVLN-EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
++I+ Y + E ++EAI L + S + + ++F+S LKAC NL + + QV+
Sbjct: 130 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYA 187
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
V G VG++LI +YAR G ++ A + F L +K++V+++ ++ G K+ + A+
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LLF ++ ++ ++ F +S+L + + ++ +G+Q+H +K G++ +LI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+CG I+ +F M +R+V+SWT +I G ++G A A+ F +M+++ KPNEIT++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VLSAC H G++ E F SM E+G+ P +EHY CMVDLLG++G +A + I MP
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
D +W ++L AC H NT+L AE +L P+DP+ Y++LSN++A+ G W + K+
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 648 RKAGKKLGE-KKAGMSWIEVSS 668
RK+ K+ K+AG SWIEV +
Sbjct: 488 RKSMKERNLIKEAGCSWIEVEN 509
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 246/564 (43%), Gaps = 116/564 (20%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A+K+FD+M +N+V+WT M+T + AI L+ M G V P+ F YS+VL AC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACT 67
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC---GSL--TRKLFDQYS-----N 166
G L LG+ +H R+ R L D + +L+DMY KC GS+ +RK+F+Q +
Sbjct: 68 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 167 WAA--SAYGN--------VALWNSMLSG------------------------GKQVHAFC 192
W A +AY + L+ M+SG G+QV+++
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
VK G + SLI MY + G ++D F+ + E+++VS+ I+ G
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG----------- 236
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y N ++EEA L + I
Sbjct: 237 -----------------------------------------YAKNLKSEEAFLLFNEIAD 255
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+G+ I ++TF S L ++ Q+HG ++ GY+ + + + LI +Y+R GN+
Sbjct: 256 TGIGISAFTFASLLSGAASIGAMGK--GEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 313
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
++A ++F+ + ++V++W+ +I G KHG + A +F M+ + N+ +VL C
Sbjct: 314 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 373
Query: 433 SCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
S + + G K ++ + G ++D+ + G + + + MP D +
Sbjct: 374 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 433
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W ++ C +G E + EMI + + ++ + + AG ++ I SMK
Sbjct: 434 WRTLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 492
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGC 574
+L+ +AGC
Sbjct: 493 ER--------------NLIKEAGC 502
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 199/441 (45%), Gaps = 60/441 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFT---SLNDAHKLFDEMAR 66
L C + + GK LH R+I+ GL+ D+ G +L+ MYA S++D+ K+F++M
Sbjct: 63 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 122
Query: 67 KNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N++SWT ++TAY S + AI L+ M+ G + PN F +S+VLKAC D G
Sbjct: 123 HNVMSWTAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGE 181
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD--------------------- 162
++ + + + N+L+ MY + G + RK FD
Sbjct: 182 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 241
Query: 163 -------QYSNWAASAYGNVAL-WNSMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
++ A + G A + S+LSG G+Q+H +K G++
Sbjct: 242 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LI MY +CG I+ +FN M +R+V+SWT +I G F F AL + +
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG-FAKHGFATRALEMFHKMLETGTK 360
Query: 266 ARKLFDQYSSWAASAYGNVA----LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
++ A S G ++ +NSM + + + E ++ + SG+ +++
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 420
Query: 322 FTSALKACINLLNFNSRF-ALQVHGLIVTSGYELDYIVGSN---------LIDLYARLGN 371
F +++ + L + + A +VHG + + I+ L +L+A G
Sbjct: 421 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 480
Query: 372 VKSALELFHRLPKKDVVAWSG 392
K +++ + +++++ +G
Sbjct: 481 WKDVVKIRKSMKERNLIKEAG 501
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MPER++V+WT +I Q G A++AI F +M S P+ T+ VLSAC GL
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA---GCFDDAEQLIAEMPFKPDKTIWA 595
+ + + + GL + +VD+ + G DD+ ++ +MP + + W
Sbjct: 72 LALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWT 129
Query: 596 SMLKA 600
+++ A
Sbjct: 130 AIITA 134
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 255/509 (50%), Gaps = 54/509 (10%)
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE---------------------- 244
+++ Y+KCG + GL LF+ MPER+VVSW+ II G +
Sbjct: 256 VLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMP 315
Query: 245 -------------------CSCFTLSALVDMYSNCNV---------LCEARKLFDQYSSW 276
CS + +V + NV L KL + +
Sbjct: 316 NEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVF 375
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+ + WN+M++GY L E ++ + D++TF S L L F
Sbjct: 376 ESCLSKDTVSWNAMMAGY-LQLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEF- 433
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
R LQVHG +V SGY D VG++L D+Y + + + F + DV +W+ + G
Sbjct: 434 -RLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAG 492
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C + G A + +M N +N+F +++ L C+ LAS+ GK+ H +K G + +
Sbjct: 493 CLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVD 552
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+L+DMY KCG + +F+ M ER VVSWT +I+G NG+ KEA+ F EM +
Sbjct: 553 VCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRK 612
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+PN ITF+ VL+AC G ++EAW F+SM ++G+ P +HY CMV+LLG+AGC
Sbjct: 613 GEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIK 672
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+AE LI +MPF+P +W ++L AC H + + AE L DPS Y++LSN++A
Sbjct: 673 EAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFA 732
Query: 637 TLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
WDS+ +R+ + KK G SW+
Sbjct: 733 GGDNWDSVGILRELMETRDVKKVPGSSWM 761
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 192/501 (38%), Gaps = 124/501 (24%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L+ C + G ++H + +K L +F N++L+ Y L+ +LFDEM
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPE 278
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N+VSW+ ++ + + RPN A+ L+ M G++ PN F + L ACSL+ L
Sbjct: 279 RNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQ 338
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
I+ I R + LMN L ++ KL + + + + WN+M++G
Sbjct: 339 IYAFIVRLGYGSNVFLMNAFLTALIR----HEKLLEALEVFESCLSKDTVSWNAMMAGYL 394
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G QVH VK G+ +
Sbjct: 395 QLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICV 454
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC------------------ 245
SL DMY+K ++ DG F+ M DV SWT + GC +C
Sbjct: 455 GNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGV 514
Query: 246 ------------SCFTLS-------------------------ALVDMYSNCNVLCEARK 268
SC L+ AL+DMY+ C + A
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F + V W +MI G+ N Q +EA+ + + + TF L A
Sbjct: 575 VFRSMDERS------VVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Query: 329 CIN--LLN-----FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
C ++ F+S A HG+ + + Y+ +++L R G +K A +L +
Sbjct: 629 CSQGGFIDEAWKYFSSMSA--DHGIAPSEDH---YVC---MVNLLGRAGCIKEAEDLILQ 680
Query: 382 LP-KKDVVAWSGLIMGCTKHG 401
+P + + W L+ C HG
Sbjct: 681 MPFQPGSLVWQTLLGACLVHG 701
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ AL C SI++GK H IK G D+ N LL MYA + A+ +F M
Sbjct: 521 LATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMD 580
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+++VSWTTM+ + N + A+++++ M + G EPN + VL ACS G +D
Sbjct: 581 ERSVVSWTTMIMGFAHNGQTKEALQIFDEMRK-GEAEPNHITFICVLNACSQGGFID 636
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 278/502 (55%), Gaps = 41/502 (8%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALF------NFMPERDVVSWTGIIVGCFECSCFTLS 251
E+ VT T +I + + G D + LF ++P+R +++ ++ C E L
Sbjct: 13 ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR--FTYSSVLSACTELGLLALG 70
Query: 252 --------------------ALVDMYSNCNV---LCEARKLFDQYSSWAASAYGNVALWN 288
+LVDMY+ C + ++RK+F+Q NV W
Sbjct: 71 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH------NVMSWT 124
Query: 289 SMISGYVLN-EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
++I+ Y + E ++EAI L + S + + ++F+S LKAC NL + + QV+
Sbjct: 125 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYA 182
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
V G VG++LI +YAR G ++ A + F L +K++V+++ ++ G K+ + A+
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
LLF ++ ++ ++ F +S+L + + ++ +G+Q+H +K G++ +LI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+CG I+ +F M +R+V+SWT +I G ++G A A+ F +M+++ KPNEIT++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
VLSAC H G++ E F SM E+G+ P +EHY CMVDLLG++G +A + I MP
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 588 KPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
D +W ++L AC H NT+L AE +L P+DP+ Y++LSN++A+ G W + K+
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 648 RKAGKKLGE-KKAGMSWIEVSS 668
RK+ K+ K+AG SWIEV +
Sbjct: 483 RKSMKERNLIKEAGCSWIEVEN 504
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 246/564 (43%), Gaps = 116/564 (20%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A+K+FD+M +N+V+WT M+T + AI L+ M G V P+ F YS+VL AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACT 62
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC---GSL--TRKLFDQYS-----N 166
G L LG+ +H R+ R L D + +L+DMY KC GS+ +RK+F+Q +
Sbjct: 63 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 167 WAA--SAYGN--------VALWNSMLSG------------------------GKQVHAFC 192
W A +AY + L+ M+SG G+QV+++
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
VK G + SLI MY + G ++D F+ + E+++VS+ I+ G
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG----------- 231
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y N ++EEA L + I
Sbjct: 232 -----------------------------------------YAKNLKSEEAFLLFNEIAD 250
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+G+ I ++TF S L ++ Q+HG ++ GY+ + + + LI +Y+R GN+
Sbjct: 251 TGIGISAFTFASLLSGAASIGAMGK--GEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 308
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
++A ++F+ + ++V++W+ +I G KHG + A +F M+ + N+ +VL C
Sbjct: 309 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 368
Query: 433 SCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
S + + G K ++ + G ++D+ + G + + + MP D +
Sbjct: 369 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 428
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W ++ C +G E + EMI + + ++ + + AG ++ I SMK
Sbjct: 429 WRTLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 487
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGC 574
+L+ +AGC
Sbjct: 488 ER--------------NLIKEAGC 497
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 199/441 (45%), Gaps = 60/441 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFT---SLNDAHKLFDEMAR 66
L C + + GK LH R+I+ GL+ D+ G +L+ MYA S++D+ K+F++M
Sbjct: 58 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 117
Query: 67 KNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
N++SWT ++TAY S + AI L+ M+ G + PN F +S+VLKAC D G
Sbjct: 118 HNVMSWTAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGE 176
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD--------------------- 162
++ + + + N+L+ MY + G + RK FD
Sbjct: 177 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 236
Query: 163 -------QYSNWAASAYGNVAL-WNSMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
++ A + G A + S+LSG G+Q+H +K G++
Sbjct: 237 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LI MY +CG I+ +FN M +R+V+SWT +I G F F AL + +
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG-FAKHGFATRALEMFHKMLETGTK 355
Query: 266 ARKLFDQYSSWAASAYGNVA----LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
++ A S G ++ +NSM + + + E ++ + SG+ +++
Sbjct: 356 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 415
Query: 322 FTSALKACINLLNFNSRF-ALQVHGLIVTSGYELDYIVGSN---------LIDLYARLGN 371
F +++ + L + + A +VHG + + I+ L +L+A G
Sbjct: 416 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 475
Query: 372 VKSALELFHRLPKKDVVAWSG 392
K +++ + +++++ +G
Sbjct: 476 WKDVVKIRKSMKERNLIKEAG 496
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MPER++V+WT +I Q G A++AI F +M S P+ T+ VLSAC GL
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA---GCFDDAEQLIAEMPFKPDKTIWA 595
+ + + + GL + +VD+ + G DD+ ++ +MP + + W
Sbjct: 67 LALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWT 124
Query: 596 SMLKA 600
+++ A
Sbjct: 125 AIITA 129
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 238/420 (56%), Gaps = 12/420 (2%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ LV++Y C+ L AR LFD+ N+ LWN +I GY N E A+ L +
Sbjct: 114 TKLVNLYCVCDSLSSARLLFDRIPK------HNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ D++TF LKAC L ++H +V +G+E D VG+ LID+YA+ G
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAI--EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
V SA E+F ++ +D V W+ ++ +++G L +M+ + + + + +
Sbjct: 226 CVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAIS 285
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+ A+L +G+++H ++ FE D T+L+DMY KCG + LF+ + + VVS
Sbjct: 286 ASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVS 345
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I G +G A EA+ F+EM KP+ ITF+GVLSAC H GL+EE W F +M
Sbjct: 346 WNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMI 404
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
+Y ++P ++HY CMVDLLG +G D+A LI +M PD +W ++L +C+ H N +L
Sbjct: 405 RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELG 464
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEVSS 668
I E+L+ P+D YV+LSN+YA G W+ ++K+RK ++L +K SWIEV +
Sbjct: 465 EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRL-KKSIACSWIEVKN 523
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 124/278 (44%), Gaps = 53/278 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C R++IK GK LH ++ G D L+++Y SL+ A LFD + + NI
Sbjct: 82 LQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNI 141
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W ++ Y N A++LY M +YG V P+ F + VLKAC+ ++ GR IHE
Sbjct: 142 FLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLV-PDNFTFPFVLKACAALSAIEHGREIHE 200
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ + E D + L+DMY KCG + R++FD+ + LWNSML+
Sbjct: 201 HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI------LVRDAVLWNSMLAAYSQ 254
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+++H ++ FE D
Sbjct: 255 NGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKV 314
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
T+L+DMY KCG + LF + + VVSW +I G
Sbjct: 315 KTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITG 352
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 160/335 (47%), Gaps = 17/335 (5%)
Query: 297 NEQNEEAITLLSHIHSSGMCI-DSYT-FTSALKACINLLNFNSRFAL----QVHGLIVTS 350
N+ + +AI S+ H+ C+ +Y+ + S L++CI +R A+ Q+H + +
Sbjct: 51 NQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCI------ARKAIKPGKQLHAQVCLA 104
Query: 351 GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
G+ D ++ + L++LY ++ SA LF R+PK ++ W+ LI G +G A L+
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + + F VLK C+ L+++ G+++H V+ G+EK+ +LIDMY KC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G + +F + RD V W ++ QNG ++ EM+ + L+P E T + +
Sbjct: 225 GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 531 SA-CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
SA +A L + S + E+ E H + +VD+ + G A L + K
Sbjct: 285 SASADNAALPQGRELHGLSWRQEF--ESHDKVKTALVDMYAKCGSVRVARNLFERLGVK- 341
Query: 590 DKTIWASMLKACETHNN-TKLVSIIAEQLLATSPE 623
W +M+ H + T+ + + E P+
Sbjct: 342 RVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPD 376
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 167/475 (35%), Gaps = 146/475 (30%)
Query: 71 SWTTMVTAYTSNKRPNWAI-RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
S+T+ + +N+ AI N E + P Y+++L++C + G+ +H
Sbjct: 40 SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
++ +DTV+ L+++Y C SL+ R LFD+ N+ LWN ++ G
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK------HNIFLWNVLIRGYAW 153
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+++H V+ G+EK+
Sbjct: 154 NGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFV 213
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV---------GCFE-CSCFTLSAL 253
+LIDMY KCG + +F+ + RD V W ++ C CS L+ L
Sbjct: 214 GAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGL 273
Query: 254 ---------------------------------------------VDMYSNCNVLCEARK 268
VDMY+ C + AR
Sbjct: 274 RPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARN 333
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LF++ V WN+MI+GY ++ EA+ L ++ D TF L A
Sbjct: 334 LFERL------GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-PDHITFVGVLSA 386
Query: 329 CINLLNFNSRFALQVHGLIVTSG----------YELDYIVG--SNLIDLYARLGNVKSAL 376
C HG ++ G Y++D V + ++DL G + A
Sbjct: 387 C-------------SHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAY 433
Query: 377 ELFHR---LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISS 427
L + LP V W L+ C H L + +I D ++I S
Sbjct: 434 NLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILS 486
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 244/443 (55%), Gaps = 25/443 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G++ + TSLI MY++ G ++D +F+ RDVVS+T +I G
Sbjct: 107 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKG--- 163
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+KLFD+ +V WN+MISGY +EA+
Sbjct: 164 ------------YASRGYIENAQKLFDEI------PVKDVVSWNAMISGYAETGNYKEAL 205
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + + LID
Sbjct: 206 ELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELGRQVHLWIDDHGFGSNLKIVNALID 263
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G V++A LF L KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 264 LYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 323
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G LTSLIDMY KCG+I+ +F
Sbjct: 324 MLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 383
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
M R + SW +I G +G+A A F +M ++ + P++ITF+G+LSAC H+G+++
Sbjct: 384 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 443
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF SM +Y + P LEHY CM+DLLG G F +A+++I MP +PD IW S+LKAC+
Sbjct: 444 RHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACK 503
Query: 603 THNNTKLVSIIAEQLLATSPEDP 625
HNN +L A+ L+ PE P
Sbjct: 504 MHNNVELGESYAQNLIKIEPETP 526
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 34/335 (10%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ + YTF LK+C F R Q
Sbjct: 52 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF--REGQQ 109
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ GY+LD V ++LI + YA G
Sbjct: 110 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGY 169
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+++A +LF +P KDVV+W+ +I G + G A LF+DM+ +N ++ + +V+
Sbjct: 170 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 229
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+QVH + GF + +LID+Y KCGE++ LF+ + +DV+SW
Sbjct: 230 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISW 289
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMK 550
+I G KEA+ FQEM++S PN++T L +L AC H G ++ W K
Sbjct: 290 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINK 349
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
G+ ++D+ + G + A+Q+ M
Sbjct: 350 RLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 384
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 189/440 (42%), Gaps = 78/440 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + ++ ++G+ +H ++K G D++ +L+SMY L DA
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 155 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK- 213
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG +
Sbjct: 214 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVET 273
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF+ S Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 274 ACGLFEGLS------YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 327
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A+
Sbjct: 328 LPACAHLGAIDIGRWIHVYINKR--------LKGVTNASSLLTS-LIDMYAKCGDIEAAK 378
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++FD + + S+ WN+MI G+ ++ + A L S + +G+ D TF L
Sbjct: 379 QVFDSMLTRSLSS------WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 432
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALELFHR 381
AC S + G + DY + L IDL G K A E+
Sbjct: 433 AC-------SHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRT 485
Query: 382 LP-KKDVVAWSGLIMGCTKH 400
+P + D V W L+ C H
Sbjct: 486 MPMEPDGVIWCSLLKACKMH 505
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/576 (22%), Positives = 225/576 (39%), Gaps = 141/576 (24%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+ +H ++IK GL + + L+ + F L A +F+ + N++ W TM +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+ P A+ LY M+ G + PN + + +LK+C+ S G+ IH + + + D
Sbjct: 64 ALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------------- 172
+ +L+ MYV+ G L RK+FDQ S+ +A+ Y
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 182
Query: 173 GNVALWNSMLSG--------------------------------------------GKQV 188
+V WN+M+SG G+QV
Sbjct: 183 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 242
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF 248
H + GF + +LID+Y KCGE++ LF + +DV+SW +I G
Sbjct: 243 HLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGG------- 295
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
Y++ N+ +EA+ L
Sbjct: 296 --------YTHMNLY-------------------------------------KEALLLFQ 310
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
+ SG + T S L AC +L + + V+ G + ++LID+YA+
Sbjct: 311 EMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAK 370
Query: 369 LGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSV 428
G++++A ++F + + + +W+ +I G HG + A+ LF M + D + +
Sbjct: 371 CGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGL 430
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-------LIDMYLKCGEIDDGLALFK 481
L CS L G+ + R +D +T +ID+ CG + + +
Sbjct: 431 LSACSHSGMLDLGRHIF-----RSMS-QDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIR 484
Query: 482 FMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
MP E D V W ++ C + + +Y Q +I+
Sbjct: 485 TMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK 520
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 30/282 (10%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y+ + A LF
Sbjct: 219 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLF 278
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++ K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 279 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAI 337
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L+ +L+DMY KCG + +++FD + S+
Sbjct: 338 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS------ 391
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G GK AF + K G + +D+T L+ G +D G +F M
Sbjct: 392 WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS 451
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
+ ++ GC ++D+ +C + EA+++
Sbjct: 452 QDYKITPKLEHYGC----------MIDLLGHCGLFKEAKEMI 483
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ +G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG--- 62
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + +LK C+ + R G+Q+H +K G++ +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-------------------------- 490
TSLI MY++ G ++D +F RDVVS
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 182
Query: 491 -----WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
W +I G + G KEA+ F++M+++ ++P+E T + V+SAC +G +E +
Sbjct: 183 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 242
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ ++G +L+ ++DL + G + A L + +K D W +++ TH
Sbjct: 243 HLWID-DHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYK-DVISWNTLIGG-YTHM 299
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLS 326
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 296/590 (50%), Gaps = 40/590 (6%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
+ +LKAC DL G+ +H + + T L N +Y KCGSL + +++
Sbjct: 12 FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSL----HNAQTSF 67
Query: 168 AASAYGNVALWNSMLSG-GKQVHAFCVKRGFEK----EDVTLTSLIDMYLKCGEIDDGLA 222
+ Y NV +N++++ K ++ F++ + V+ +LI Y GE L
Sbjct: 68 DLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALR 127
Query: 223 LFNFMPER----DVVSWTGIIVGC------------------FECSCFTLSALVDMYSNC 260
LF + E D + +G+I+ C ++C +A++ YS
Sbjct: 128 LFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRK 187
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
L EAR++F + + WN+MI + + EA+ L + G+ +D +
Sbjct: 188 GFLNEARRVFREMGEGGGR---DEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMF 244
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR-LGNVKSALELF 379
T S L A + + +Q HG+++ SG+ + VGS LIDLY++ G + ++F
Sbjct: 245 TMASVLTAFTCVKDLVG--GMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302
Query: 380 HRLPKKDVVAWSGLIMGCTKH-GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
+ D+V W+ +I G +++ L+ FR+M ++ + V CS L+S
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362
Query: 439 RRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
GKQVHA +K +++ +L+ MY KCG + D +F MPE ++VS +I G
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q+G E++ F+ M+Q + PN ITF+ VLSAC H G VEE F MK + +EP
Sbjct: 423 YAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP 482
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY CM+DLLG+AG +AE++I MPF P WA++L AC H N +L A +
Sbjct: 483 EAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF 542
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
L P + + YVMLSN+YA+ W+ + V++ ++ G +KK G SWIE+
Sbjct: 543 LQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEI 592
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 136/597 (22%), Positives = 253/597 (42%), Gaps = 73/597 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+ L+ L+ C +R + GK+LH K + + N+ +Y+ SL++A
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 61 FDEMARKNIVSWTTMVTAYTS-----------NKRPNWAIRLYNHML----EYGSVEP-- 103
FD N+ S+ T++ AY ++ P I YN ++ + G P
Sbjct: 67 FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126
Query: 104 -------------NGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
+GF S V+ AC D+ L R +H + + + N +L Y
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIAC--GDDVGLVRQLHCFVVVCGYDCYASVNNAVLACY 184
Query: 151 VKCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAF--CVKRGFEK 199
+ G L R++F + + WN+M+ G + V F V+RG +
Sbjct: 185 SRKGFLNEARRVFREMGEGGGR---DEVSWNAMIVACGQHREGLEAVELFREMVRRGLKV 241
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ T+ S++ + ++ G+ M I F + S L+D+YS
Sbjct: 242 DMFTMASVLTAFTCVKDLVGGMQFHGMM-----------IKSGFHGNSHVGSGLIDLYSK 290
Query: 260 C-NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ-NEEAITLLSHIHSSGMCI 317
C + E RK+F++ ++ ++ LWN+MISG+ E +E+ I + +G
Sbjct: 291 CAGGMVECRKVFEEIAA------PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHP 344
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSAL 376
D +F AC NL + QVH L + S + + V + L+ +Y++ GNV A
Sbjct: 345 DDCSFVCVTSACSNL--SSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDAR 402
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F +P+ ++V+ + +I G +HG+ + LF M+ + N +VL C
Sbjct: 403 RVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTG 462
Query: 437 SLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGI 494
+ G++ +R E E + +ID+ + G++ + + + MP + W +
Sbjct: 463 KVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATL 522
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+ C ++G + A+ E +Q L+P N ++ + + A EEA T+ M+
Sbjct: 523 LGACRKHGNVELAVKAANEFLQ--LEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/642 (28%), Positives = 315/642 (49%), Gaps = 96/642 (14%)
Query: 58 HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
H LF+ N+ +T+M+ Y+ + + ++ HM G V P+ F+Y ++K+
Sbjct: 54 HLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCG-VRPDAFVYPILIKS--- 109
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV 175
+G+ +G H + + D + N ++DMY + G + RK+FD+ ++ V
Sbjct: 110 AGNGGIG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYER----KV 163
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
A WN+M+SG Y K LF+ MPER+V++W
Sbjct: 164 ADWNAMVSG--------------------------YWKWESEGQAQWLFDVMPERNVITW 197
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T ++ G Y+ L AR+ FD +V WN+M+SGY
Sbjct: 198 TAMVTG---------------YAKVKDLEAARRYFDCMPE------RSVVSWNAMLSGYA 236
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC---------INLLNFNSRFALQVHGL 346
N EE + L + ++G+ D T+ + + AC +L+ + +Q++
Sbjct: 237 QNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCF 296
Query: 347 IVTS---------------------GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
+ T+ G + + + +I Y R+GN+ SA ELF+ +P +
Sbjct: 297 VRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR 356
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQV 444
+VV W+ +I G ++G +++A LF++MI + + ++ + SV+ C L +L G V
Sbjct: 357 NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWV 416
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
F + + ++I MY +CG ++D +F+ M RDVVS+ +I G +G
Sbjct: 417 VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHG 476
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
EAI M + ++P+ +TF+GVL+AC HAGL+EE +F S+K +P ++HY C
Sbjct: 477 VEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYAC 531
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
MVDLLG+ G +DA++ + MP +P ++ S+L A H +L + A +L P++
Sbjct: 532 MVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDN 591
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+++LSN+YA+ G W + ++R+A KK G KK G SW+E
Sbjct: 592 SGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVE 633
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 184/503 (36%), Gaps = 172/503 (34%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE------------------ 63
G H ++K G D F N ++ MYA + A K+FDE
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 64 ---------------MARKNIVSWTTMVTAYTSNKRPNWA-------------------- 88
M +N+++WT MVT Y K A
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 89 -----------IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+RL++ M+ G +EP+ + V+ ACS GD L + + +++++
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAG-IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQ 292
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
+ + LLDMY KCGS+ R++FD+ AY N WN+M+S
Sbjct: 293 LNCFVRTALLDMYAKCGSIGAARRIFDEL-----GAYRNSVTWNAMISA----------- 336
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE----------- 244
Y + G +D LFN MP R+VV+W +I G +
Sbjct: 337 ---------------YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381
Query: 245 --------------------CSCFTLSAL-------------------------VDMYSN 259
+C L AL + MYS
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 441
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
C + +A+++F + ++ +V +N++ISG+ + EAI L+S + G+ D
Sbjct: 442 CGSMEDAKRVFQEMAT------RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDR 495
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYE---LDYIVGSNLIDLYARLGNVKSAL 376
TF L AC S L G V + +D+ + ++DL R+G ++ A
Sbjct: 496 VTFIGVLTAC-------SHAGLLEEGRKVFESIKDPAIDHY--ACMVDLLGRVGELEDAK 546
Query: 377 ELFHRLPKKDVVAWSGLIMGCTK 399
R+P + G ++ ++
Sbjct: 547 RTMERMPMEPHAGVYGSLLNASR 569
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + CG +++ G + + + + I N ++ MY+ S+ DA ++F EMA
Sbjct: 397 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 456
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VS+ T+++ + ++ AI L + M E G +EP+ + VL ACS +G L+ GR
Sbjct: 457 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKE-GGIEPDRVTFIGVLTACSHAGLLEEGR 515
Query: 126 LIHERITREKLEYDTVLMNTL 146
+ E I +++ +++ L
Sbjct: 516 KVFESIKDPAIDHYACMVDLL 536
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 303/671 (45%), Gaps = 123/671 (18%)
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TR 158
V+ + + VLK CS S D+ G +H + + + D + NTLL +Y CG L R
Sbjct: 6 VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR 65
Query: 159 KLFDQYSNWAASAYGNVALWNSMLS----------------------------------- 183
+LFD+ +V WN+++
Sbjct: 66 RLFDEMPE------RDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 119
Query: 184 ----------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+++H + VK G + + T +L+D Y KCG + +FN E++ V
Sbjct: 120 PISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEV 179
Query: 234 SWTGIIVG----------------------------------------CF---------- 243
SW II G CF
Sbjct: 180 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239
Query: 244 -----ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
E F ++L+DMY+ EA +F N+ WN+MI+ Y LN
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDR------RNIVSWNAMIANYALNR 293
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EAI + + +G C ++ TFT+ L AC L ++H + V G D V
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGP--GKEIHAMGVRIGLTSDLFV 351
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC--TKHGLNSLAYLLFRDMINS 416
++LID+YA+ G + SA +F+ +KD V+++ LI+G T L SL ++
Sbjct: 352 SNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 410
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
DV F+ V+ C+ LA+L++GK+VH ++ SL+D Y KCG ID
Sbjct: 411 KPDVVSFV--GVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA 468
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF + +DV SW +I+G G G + AI+ F+ M ++ + ++++ VLSAC H
Sbjct: 469 CRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHG 528
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GLVE W F+ M + LEP HY CMVDLLG+AG ++A +LI ++P PD IW +
Sbjct: 529 GLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGA 587
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE 656
+L AC + N +L AE L P+ Y++LSN+YA G WD +K+R+ K G
Sbjct: 588 LLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGA 647
Query: 657 KK-AGMSWIEV 666
KK G SW+++
Sbjct: 648 KKNPGCSWVQI 658
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 33/396 (8%)
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
V+RG + +D T ++ + D + M VV G F+ + +
Sbjct: 2 VRRGVQLDDHTFPFVLKL------CSDSFDICKGMEVHGVVFKLG-----FDTDVYVGNT 50
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA------ITL 306
L+ +Y NC L +AR+LFD+ +V WN++I +N EA + L
Sbjct: 51 LLMLYGNCGFLNDARRLFDEMPE------RDVVSWNTIIGLLSVNGDYTEARNYYFWMIL 104
Query: 307 LSHIHSSGMCIDSY-TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
S I + + + S ++AL+ + ++H V G + + L+D
Sbjct: 105 RSVIKPNLVSVISLLPISAALE--------DEEMTRRIHCYSVKVGLDSQVTTCNALVDA 156
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G+VK+ ++F+ +K+ V+W+ +I G G A FR MI++ N I
Sbjct: 157 YGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTI 216
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
SS+L V L + GK++H F ++ G E + SLIDMY K G + +F +
Sbjct: 217 SSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDR 276
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
R++VSW +I N EAI + +M ++ PN +TF VL AC G + I
Sbjct: 277 RNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEI 336
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+M GL L ++D+ + GC A +
Sbjct: 337 H-AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 371
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
M+ ++ VLK+CS + +G +VH K GF+ + +L+ +Y CG
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLS 531
++D LF MPERDVVSW II NG EA Y+ MI +S +KPN ++ + +L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 532 ACRHAGLVEEAWT-IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
A L +E T + GL+ + +VD G+ G Q+ E + +
Sbjct: 121 I--SAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNE-TVEKN 177
Query: 591 KTIWASMLK--ACE 602
+ W S++ AC+
Sbjct: 178 EVSWNSIINGLACK 191
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ V + C ++KQGK +H ++ L +F N+LL Y ++ A +LF
Sbjct: 413 DVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 472
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+++ K++ SW TM+ Y AI ++ M + +V+ + Y AVL ACS G +
Sbjct: 473 NQILFKDVASWNTMILGYGMIGELETAISMFEAMRD-DTVQYDLVSYIAVLSACSHGGLV 531
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY------SNWAA---- 169
+ G + ++LE + ++D+ + G + KL Q + W A
Sbjct: 532 ERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGA 591
Query: 170 -SAYGNVAL 177
YGNV L
Sbjct: 592 CRIYGNVEL 600
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 249/435 (57%), Gaps = 13/435 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G F+ F + L++M+S + + ARK+FD+ + + +WN++ L
Sbjct: 95 LVDGGFDQDPFLATKLINMFSELDTVDNARKVFDK------TRKRTIYVWNALFRALALA 148
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYEL 354
+ + + L ++ G+ D +T+T LKAC+ L++F + ++H I+ GY
Sbjct: 149 GRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQK-GKEIHAHILRHGYGA 207
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
V + L+D+YAR G V A +F +P K+VV+WS +I K+G A LFR+M+
Sbjct: 208 HVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMM 267
Query: 415 NSNQD--VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGE 472
+ D N + SVL+ C+ A+L +GK +HA+ ++RG + +++LI MY +CG+
Sbjct: 268 LNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGK 327
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
++ G +F M ++DVV W +I G +G ++AI F+EMI P+ I+F+ VL A
Sbjct: 328 LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGA 387
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H GLVEE +F SM E+G++P +EHY CMVDLLG+A D+A ++I ++ +P
Sbjct: 388 CSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPK 447
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AG 651
+W S+L AC H + +L +++L P + YV+L+++YA MWD + +V+K
Sbjct: 448 VWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLD 507
Query: 652 KKLGEKKAGMSWIEV 666
+ +K G SWIEV
Sbjct: 508 SRELQKVPGRSWIEV 522
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 8/285 (2%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
AL VH L+V G++ D + + LI++++ L V +A ++F + K+ + W+ L
Sbjct: 88 ALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALAL 147
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC---SCLAS-LRRGKQVHAFCVKRGFEK 455
G + L+ M ++F + +LK C CL S L++GK++HA ++ G+
Sbjct: 148 AGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGA 207
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+T+L+DMY + G + A+F MP ++VVSW+ +I +NG+ EA+ F+EM+
Sbjct: 208 HVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMM 267
Query: 516 QSRLK--PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
+ PN +T + VL AC +E+ I + GL+ L ++ + + G
Sbjct: 268 LNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL-RRGLDSILPVISALITMYARCG 326
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+ QLI + K D +W S++ + H + I E+++
Sbjct: 327 KLESG-QLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI 370
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 30/266 (11%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+++GK +H I+++G + L+ MYA F ++ A +FDEM KN+VSW+ M+
Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249
Query: 79 YTSNKRPNWAIRLYNHML--EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y N +P A+ L+ M+ + SV PN +VL+AC+ L+ G+LIH I R L
Sbjct: 250 YAKNGKPYEALELFREMMLNTHDSV-PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGL 308
Query: 137 EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS-------GGKQ 187
+ +++ L+ MY +CG L + +FD+ +V LWNS++S G K
Sbjct: 309 DSILPVISALITMYARCGKLESGQLIFDRMHK------KDVVLWNSLISSYGLHGYGRKA 362
Query: 188 VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ F + GF ++ S++ G +++G LF M V GI
Sbjct: 363 IKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESM-----VKEHGIQPSVEHY 417
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFD 271
+C +VD+ N L EA K+ +
Sbjct: 418 AC-----MVDLLGRANRLDEAAKIIE 438
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 47/272 (17%)
Query: 14 GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWT 73
+R S+ +H ++ G QD F L++M+++ ++++A K+FD+ ++ I W
Sbjct: 80 ARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWN 139
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS----GDLDLGRLIHE 129
+ A R N + LY M G V + F Y+ +LKAC S L G+ IH
Sbjct: 140 ALFRALALAGRGNDVLELYPRMNMMG-VSSDRFTYTYLLKACVASECLVSFLQKGKEIHA 198
Query: 130 RITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYS-----NWAA---------SAYG 173
I R +M TL+DMY + C S +FD+ +W+A Y
Sbjct: 199 HILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYE 258
Query: 174 NVALWNSM--------------------------LSGGKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ M L GK +HA+ ++RG + +++L
Sbjct: 259 ALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISAL 318
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
I MY +CG+++ G +F+ M ++DVV W +I
Sbjct: 319 ITMYARCGKLESGQLIFDRMHKKDVVLWNSLI 350
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L+ C +++QGK +H I++ GL + + L++MYA L +FD M
Sbjct: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K++V W +++++Y + AI+++ M+++G P+ + +VL ACS +G ++ G+
Sbjct: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG-FSPSHISFISVLGACSHTGLVEEGK 398
Query: 126 LIHERITRE 134
+ E + +E
Sbjct: 399 KLFESMVKE 407
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 20/249 (8%)
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C + L YLL + + Q I+S+ + SL VH V GF+++
Sbjct: 49 CKQGNLKQALYLLSHESNPTQQTCELLILSAARR-----NSLSDALDVHQLLVDGGFDQD 103
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
T LI+M+ + +D+ +F +R + W + GR + + + M
Sbjct: 104 PFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNM 163
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE-------YGLEPHLEHYYCMVDLL 569
+ + T+ +L AC + E F E +G H+ ++D+
Sbjct: 164 MGVSSDRFTYTYLLKAC----VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT--KLVSIIAEQLLATSPEDPSK 627
+ GC A + EMP K + W++M+ AC N + + + E +L T P+
Sbjct: 220 ARFGCVSYASAVFDEMPVK-NVVSWSAMI-ACYAKNGKPYEALELFREMMLNTHDSVPNS 277
Query: 628 YVMLSNVYA 636
M+S + A
Sbjct: 278 VTMVSVLQA 286
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 265/524 (50%), Gaps = 72/524 (13%)
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC----------------- 247
T+LI G + A+F+ MP+RDVV+WT ++ G C
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVG 66
Query: 248 ---FTLS-------------------------------------ALVDMYSNCNV---LC 264
FTLS AL++ Y++C +
Sbjct: 67 PNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVE 126
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
E+RKLFD S +A W SM++GY Q + + L + G+ + +T +
Sbjct: 127 ESRKLFDALGSGRTAAS-----WTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSI 181
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
AL AC ++ N Q+H L + + + V ++LID+Y N+ A LF +P+
Sbjct: 182 ALHACASIANLC--VGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPE 239
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
+++V W+ +I ++ + +A L R+M N N F ++S+ C+ LASLR G+QV
Sbjct: 240 RNLVTWNTMIAWYSQCN-HLMALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQV 295
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
H ++R + K+ +L+DMY KCG I + +F M +D +SWT +I G G NG A
Sbjct: 296 HGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYA 355
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
E+I F MI + + P+ + FLG++ AC H GLV+E W F SM EY L+P+ E Y C
Sbjct: 356 NESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGC 415
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
+ +LL +AG +A LI MPF PD+T+W ++L AC+ H N +L + A +++ +P+
Sbjct: 416 VTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDR 475
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
YV+L+N+YA W + R+ + +G +K AG SWI+V+
Sbjct: 476 AKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVT 519
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 192/479 (40%), Gaps = 134/479 (27%)
Query: 53 SLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVL 112
+L A +FDEM +++V+WT M++ Y SN ++A+ L+ ML G V PN F S+VL
Sbjct: 18 ALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAG-VGPNEFTLSSVL 76
Query: 113 KACSLSGDLDLG---RLIHERITREKLEYDTVLMNTLLDMYVKCG-----SLTRKLFDQ- 163
AC G D G +H R +++ ++N L++ Y C +RKLFD
Sbjct: 77 TACR-GGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDAL 135
Query: 164 ---------------YSNWAASAYGNVALWNSMLSG------------------------ 184
YS W G + L+ +M+
Sbjct: 136 GSGRTAASWTSMVAGYSRWGQEQTG-LQLFQTMIQDGIELSPFTCSIALHACASIANLCV 194
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H C+++ F SLIDMY C + D LF+ +PER++V+W +I +
Sbjct: 195 GQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQ 254
Query: 245 C----------------SCFTLS-----------------------------------AL 253
C +CFTL+ AL
Sbjct: 255 CNHLMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNAL 314
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
VDMYS C + A+K+F+ Y + W SMI+GY +N E+I L + + +
Sbjct: 315 VDMYSKCGSIANAKKMFNMMD------YKDKLSWTSMITGYGMNGYANESIQLFTSMIHA 368
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL------DYIVGSN------ 361
G+ D F + AC HG +V G+ +Y + N
Sbjct: 369 GVHPDHVVFLGLICAC-------------NHGGLVDEGWNFFRSMTSEYNLQPNKEIYGC 415
Query: 362 LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ +L AR G ++ A +L HR+P D W L+ C H L L R +I N D
Sbjct: 416 VTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPD 474
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 22/245 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C ++ G+ LH ++ + ++ N+L+ MY +L DA +LFDE+ +N
Sbjct: 182 ALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERN 241
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W TM+ Y+ A++L M +++PN F +++ AC+ L G+ +H
Sbjct: 242 LVTWNTMIAWYSQCNHL-MALQLLREM----NLQPNCFTLTSITSACAGLASLRFGQQVH 296
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
R D + N L+DMY KCGS+ +K+F+ Y + W SM++G
Sbjct: 297 GAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMD------YKDKLSWTSMITGYG 350
Query: 185 -------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
Q+ + G + V LI G +D+G F M +
Sbjct: 351 MNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNK 410
Query: 238 IIVGC 242
I GC
Sbjct: 411 EIYGC 415
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S++ G+ +H ++ +D+ N L+ MY+ S+ +A K+F+ M K+ +SW
Sbjct: 283 CAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSW 342
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+M+T Y N N +I+L+ M+ G V P+ ++ ++ AC+ G +D G +T
Sbjct: 343 TSMITGYGMNGYANESIQLFTSMIHAG-VHPDHVVFLGLICACNHGGLVDEGWNFFRSMT 401
Query: 133 RE-KLEYDTVLMNTLLDMYVKCGSLTRKLFD 162
E L+ + + + ++ + G L R+ FD
Sbjct: 402 SEYNLQPNKEIYGCVTNLLARAGRL-REAFD 431
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 308/632 (48%), Gaps = 87/632 (13%)
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
++++R++NH+ PN F ++ +++A L L H+ + KL
Sbjct: 55 HYSLRIFNHLRN-----PNTFTWNTIMRA-----HLYLQNSPHQALLHYKL--------- 95
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
L + K S T + Q S + G+Q+HA V GF+ +
Sbjct: 96 FLASHAKPDSYTYPILLQCCAARVSEFE-----------GRQLHAHAVSSGFDGDVYVRN 144
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF----------------ECSCFT 249
+L+++Y CG + +F P D+VSW ++ G E +
Sbjct: 145 TLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIA 204
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
++++ ++ + +AR++F+ ++ W++M+S Y NE EEA+ L
Sbjct: 205 SNSMIALFGRKGCVEKARRIFNGVRGRER----DMVSWSAMVSCYEQNEMGEEALVLFVE 260
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV----------- 358
+ SG+ +D SAL AC +LN VHGL V G E DY+
Sbjct: 261 MKGSGVAVDEVVVVSALSACSRVLNV--EMGRWVHGLAVKVGVE-DYVSLKNALIHLYSS 317
Query: 359 -------------GSNLIDL---------YARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
G L+DL Y R G+++ A LF+ +P+KDVV+WS +I G
Sbjct: 318 CGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+H S A LF++M ++ + S + C+ LA+L GK +HA+ + +
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
I T+LIDMY+KCG +++ L +F M E+ V +W +I+G NG ++++ F +M +
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
+ PNEITF+GVL ACRH GLV + F SM E+ +E +++HY CMVDLLG+AG
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLK 557
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+AE+LI MP PD W ++L AC H + ++ + +L+ P+ +V+LSN+YA
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYA 617
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ G W ++ ++R + G K G S IE +
Sbjct: 618 SKGNWGNVLEIRGIMAQHGVVKTPGCSMIEAN 649
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 247/455 (54%), Gaps = 64/455 (14%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE-----AITLLSHIHSSGMC-IDS 319
AR +F Q N WN+++ VL E N+E A+ L S + G +
Sbjct: 71 ARAVFRQMPE------PNCFCWNTILR--VLAETNDEHLQSEALMLFSAMLCDGRVKPNR 122
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA------------ 367
+TF S LKAC R Q+HGLIV G+ D V SNL+ +Y
Sbjct: 123 FTFPSVLKACARASRL--REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180
Query: 368 -----------------------------------RLGNVKSALELFHRLPKKDVVAWSG 392
RLG++KSA LF +P++ VV+W+
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNV 240
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G ++G A LF++M +SN D N + SVL + + +L GK +H + K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E +D+ ++L+DMY KCG ID+ L +F+ +P+R+ ++W+ II +GRA++AI +F
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M ++ + PN++ ++G+LSAC HAGLVEE + F+ M GL+P +EHY CMVDLLG+A
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G ++AE+LI MP +PD IW ++L AC+ H N K+ +AE L+ +P D YV LS
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALS 480
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
N+YA+LG W+++++VR K + K G SWIE+
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEI 515
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 201/509 (39%), Gaps = 111/509 (21%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARKNIV 70
C R +KQ LH IK G QD T ++ A F+S ++ A +F +M N
Sbjct: 29 CKTPRDLKQ---LHAIFIKTGQIQDPLTAAEVIKFCA-FSSRDIDYARAVFRQMPEPNCF 84
Query: 71 SWTTM--VTAYTSNKR-PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
W T+ V A T+++ + A+ L++ ML G V+PN F + +VLKAC+ + L G+ I
Sbjct: 85 CWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQI 144
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY--------------- 172
H I + D +++ L+ MYV C + D YS + +
Sbjct: 145 HGLIVKFGFHEDEFVISNLVRMYVMCAVME----DAYSLFCKNVVDFDGSCQMELDKRKQ 200
Query: 173 -GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
GNV LWN M+ G ++ G+I LF+ MP+R
Sbjct: 201 DGNVVLWNIMIDG--------------------------QVRLGDIKSAKNLFDEMPQRS 234
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
VVSW +I G
Sbjct: 235 VVSWNVMISG-------------------------------------------------- 244
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
Y N EAI L + SS + + T S L A + +H +
Sbjct: 245 --YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGAL--ELGKWIHLYAGKNK 300
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E+D ++GS L+D+Y++ G++ AL++F LPK++ + WS +I HG A + F
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKC 470
M + N +L CS + G+ + VK G + ++D+ +
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G +++ L + MP E D V W ++ C
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGAC 449
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 63/275 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + +++GK +H I+K+G +D F +NL+ MY + DA+
Sbjct: 129 LKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 59 ------------------------------------KLFDEMARKNIVSWTTMVTAYTSN 82
LFDEM ++++VSW M++ Y N
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQN 248
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
AI L+ M + +++PN +VL A + G L+LG+ IH + K+E D VL
Sbjct: 249 GHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA----------FC 192
+ L+DMY KCGS+ L + N W++++ G +H
Sbjct: 308 GSALVDMYSKCGSIDEAL----QVFETLPKRNAITWSAII-GAFAMHGRAEDAIIHFHLM 362
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
K G DV ++ G +++G + F+ M
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM 397
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L + +++ GK +H K + D G+ L+ MY+ S+++A ++F+ +
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLP 332
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++N ++W+ ++ A+ + R AI ++ H++ V PN Y +L ACS +G ++ GR
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAI-IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 299/611 (48%), Gaps = 87/611 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
Y +VL+ C+ L G+ +H I + D L L+ Y CG L R++FD
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 166 NWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFE----------------KE 200
NV LWN M+S ++ F V++G E ++
Sbjct: 162 K------KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRD 215
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGIIVGCFECSCFTL------ 250
++ S+I Y+ G + GL ++ M + D+ + ++VGC +L
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 251 --------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ L+DMYS C L A ++F++ NV W SMI+GY
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER------NVVSWTSMIAGYTR 329
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ ++ AI LL + G+ +D TS L AC + ++ VH I + +
Sbjct: 330 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN--GKDVHDYIKANNMASNL 387
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V + L+D+YA+ G+++ A +F + KD+++W+ ++ G K ++A
Sbjct: 388 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-GELKPDSRTMA---------- 436
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+L C+ L++L RGK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 437 ----------CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 486
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF +P +D+VSWT +I G G +G EAIA F EM + ++P+E++F+ +L AC H+
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL+E+ W F MK ++ +EP LEHY CMVDLL + G A + I +P PD TIW +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLG 655
+L C +++ +L +AE++ PE+ YV+L+N+YA + + ++R K GKK
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGL 666
Query: 656 EKKAGMSWIEV 666
K G SWIE+
Sbjct: 667 RKNPGCSWIEI 677
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 182/433 (42%), Gaps = 106/433 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL I+ L C ++ GK++H IK + I N LL MY+ L+ A ++
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M +N+VSWT+M+ YT + + AI L M + G V+ + +++L AC+ SG
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG-VKLDVVAITSILHACARSGS 367
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LD G+ +H+ I + + + N L+DMY KCGS+ S ++ ++ WN+
Sbjct: 368 LDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME----GANSVFSTMVVKDIISWNT 423
Query: 181 M-----------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
M L GK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 424 MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
LF+ +P +D+VSWT +I G +
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAG----------------------------------YG 509
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
YGN EAI + + +G+ D +F S L AC
Sbjct: 510 MHGYGN------------------EAIATFNEMRDAGIEPDEVSFISILYAC-------- 543
Query: 338 RFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP-K 384
H ++ G+ YI+ ++ ++DL +R GN+ A + LP
Sbjct: 544 -----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 598
Query: 385 KDVVAWSGLIMGC 397
D W L+ GC
Sbjct: 599 PDATIWGALLCGC 611
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R + L C ++++GK +H I++ G S D N L+ +Y L A LF
Sbjct: 431 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K++VSWT M+ Y + N AI +N M + G +EP+ + ++L ACS SG L
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLL 549
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWN 179
+ G R + +E ++D+ + G+L++ F + A A +W
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA----TIWG 605
Query: 180 SMLSGGKQVH 189
++L G + H
Sbjct: 606 ALLCGCRIYH 615
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 291/589 (49%), Gaps = 63/589 (10%)
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GKQ 187
E D N L+ Y K G L + A +V + S+L G++
Sbjct: 97 ERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGRE 156
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC-S 246
VHA V+ F+ + + +LI MY+KCG++ LF+ MP RD +SW +I G FE
Sbjct: 157 VHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDE 216
Query: 247 CFT----------------LSALVDMYSNCNVLCEARKLFDQYSSWAASAY-GNVALWNS 289
C L + + S C +L + R +S +AY GN++++NS
Sbjct: 217 CLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNS 276
Query: 290 MI-------------------------------SGYVLNEQNEEAITLLSHIHSSGMCID 318
+I SG V N ++A+ + +G D
Sbjct: 277 LIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPD 336
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T S L AC +L + +++H L +G+ L +V ++LID+Y++ ++ ALE+
Sbjct: 337 EVTIASVLSACASLGQLD--MGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEI 394
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
FH++P KDV++W+ +I G + A + FR MI ++ N + S L C+ + +L
Sbjct: 395 FHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKP-NSVTLISALSACARVGAL 453
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
GK++HA +K G + +++D+Y++CG + L F + E+DV +W ++ G
Sbjct: 454 MCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGY 512
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q G+ + F+ M++S + P+++TF+ +L AC +G+V E F MK Y + P+
Sbjct: 513 AQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPN 572
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
L+HY C+VDLLG+AG ++A + I MP KPD IW ++L AC H + L + A+ +
Sbjct: 573 LKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIF 632
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEV 666
E Y++L N+YA G WD ++KVR+ K+ G G SW+EV
Sbjct: 633 KQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEV 681
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 192/504 (38%), Gaps = 124/504 (24%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ LR C + +G+ +H ++++ D+ N L++MY + A LF
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M ++ +SW M++ Y N + L+ M E S++P+ ++V+ AC L GD
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMREL-SIDPDLMTMTSVISACELLGDE 252
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
LG +H + R + + + N+L+ MY+ G + S ++ +V W ++
Sbjct: 253 RLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWK----EAESVFSGMECRDVVSWTTI 308
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+SG G ++H + G
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFEC------ 245
V SLIDMY KC I+ L +F+ +P++DV+SWT +I G CFE
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428
Query: 246 -----------------SC-------------------------FTLSALVDMYSNCNVL 263
+C F +A++D+Y C +
Sbjct: 429 MILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRM 488
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A F+ +V WN +++GY + + L + S + D TF
Sbjct: 489 RTALNQFNLNEK-------DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFI 541
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKSALE 377
S L AC SR + GL +++Y + NL +DL R G + A E
Sbjct: 542 SLLCAC-------SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHE 594
Query: 378 LFHRLP-KKDVVAWSGLIMGCTKH 400
R+P K D W L+ C H
Sbjct: 595 FIERMPIKPDPAIWGALLNACRIH 618
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 188/642 (29%), Positives = 314/642 (48%), Gaps = 34/642 (5%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
Q + + + K GL + ++ +LL++Y + A LFDEM ++ V W ++ Y+
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
N A +L+ ML+ G P+ +L C G + GR +H + LE D+
Sbjct: 128 RNGYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFE 198
+ N L+ Y KC L LF + + + + WN+M+ Q G +
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVS------WNTMIGAYSQ-------SGLQ 233
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF----TLSALV 254
+E +T+ +M+ K EI + + N + VS + +C +++LV
Sbjct: 234 EEAITV--FKNMFEKNVEISP-VTIINLLSAH--VSHEPLHCLVVKCGMVNDISVVTSLV 288
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
YS C L A +L+ A++ ++ S++S Y + A+ S
Sbjct: 289 CAYSRCGCLVSAERLY------ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 342
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
M ID+ L C + + + +HG + SG +V + LI +Y++ +V++
Sbjct: 343 MKIDAVALVGILHGCKKSSHID--IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI-ISSVLKVCS 433
L LF +L + +++W+ +I GC + G S A+ +F M+ + + I I+S+L CS
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L L GK++H + ++ FE E+ T+LIDMY KCG ++FK + +W
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G +G A++ + EM + LKP+EITFLGVLSAC H G V+E F +M E+
Sbjct: 521 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 580
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+ P L+HY MV LLG+A F +A LI +M KPD +W ++L AC H ++ +
Sbjct: 581 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYV 640
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
A ++ ++ YV++SN+YAT MWD + +VR K G
Sbjct: 641 ARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 169/414 (40%), Gaps = 70/414 (16%)
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+NS +QV K G ++ TSL+++YLK G + LF+ MPERD V W
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 238 IIVG----CFECSCFTL------------------------------------------- 250
+I G +EC + L
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 251 --------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+AL+ YS C L A LF + + + WN+MI Y + EE
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVS------WNTMIGAYSQSGLQEE 235
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
AIT+ ++ + I T INLL+ + +H L+V G D V ++L
Sbjct: 236 AITVFKNMFEKNVEISPVTI-------INLLSAHVSHE-PLHCLVVKCGMVNDISVVTSL 287
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+ Y+R G + SA L+ + +V + ++ + G +A + F ++
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ +L C + + G +H + +K G + + + LI MY K +++ L LF+
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYF-QEMIQSRLKPNEITFLGVLSACRH 535
+ E ++SW +I GC Q+GRA A F Q M+ L P+ IT +L+ C
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 6/255 (2%)
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
Y +++ ++S++ + E + IT+ + S + + +T + L+A +FNS F
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT--SFNS-FK 66
Query: 341 LQVHGL---IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
LQV + + SG + V ++L++LY + G V SA LF +P++D V W+ LI G
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+++G A+ LF M+ + + ++L C + +G+ VH K G E +
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI Y KC E+ LF+ M ++ VSW +I Q+G +EAI F+ M +
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 518 RLKPNEITFLGVLSA 532
++ + +T + +LSA
Sbjct: 247 NVEISPVTIINLLSA 261
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 184/489 (37%), Gaps = 105/489 (21%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CGQ + QG+S+H K GL D N L+S Y+ L A LF EM
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE----------------YGSVEPNGFMYS 109
K+ VSW TM+ AY+ + AI ++ +M E + S EP ++
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP---LHC 270
Query: 110 AVLKACSLSGDLDL-----------GRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSL- 156
V+K C + D+ + G L+ ER+ + V + +++ Y + G +
Sbjct: 271 LVVK-CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 157 --------TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
TR+L + A + +S + G +H + +K G + + + LI
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------------ 244
MY K +++ L LF + E ++SW +I GC +
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 245 ---------CS---CFTL--------------------SALVDMYSNCNVLCEARKLFDQ 272
CS C L +AL+DMY+ C +A +F
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ A WNSMISGY L+ A++ + G+ D TF L AC N
Sbjct: 510 IKAPCT------ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC-NH 562
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
F + +I G + ++ L R AL L ++ K D W
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 392 GLIMGCTKH 400
L+ C H
Sbjct: 623 ALLSACIIH 631
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C + I G SLH IK GL N L++MY+ F + L
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+++ ++SW ++++ + R + A +++ M+ G + P+ +++L CS
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV----- 175
L+LG+ +H R E + + L+DMY KCG+ + A S + ++
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ---------AESVFKSIKAPCT 515
Query: 176 ALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
A WNSM+SG G Q A ++G + +++T ++ G +D+G F
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRA 575
Query: 227 MPERDVVSWT----GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
M + +S T ++VG +C AL Y W
Sbjct: 576 MIKEFGISPTLQHYALMVGLLGRACLFTEAL-------------------YLIWKMDIKP 616
Query: 283 NVALWNSMISGYVLNEQNE 301
+ A+W +++S +++ + E
Sbjct: 617 DSAVWGALLSACIIHRELE 635
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 187/668 (27%), Positives = 321/668 (48%), Gaps = 84/668 (12%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L I L C +S+ QGK LH ++I GL Q+ + L++ Y + L DA + +
Sbjct: 81 LHPIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTE 140
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
+ + W +++AY NGF A+ C
Sbjct: 141 SSNTLDPLHWNLLISAYVR----------------------NGFFVEAL---CVYK---- 171
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
+++++I ++ Y +VL A G +NS
Sbjct: 172 --NMLNKKIEPDEYTYPSVL---------------------------KACGESLDFNS-- 200
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G +VH E +L+ MY + G+++ LF+ MP RD VSW II
Sbjct: 201 --GLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTII--- 255
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
SC Y++ + EA +LF NV +WN++ G + +
Sbjct: 256 ---SC---------YASRGIWKEAFQLFGSMQEEGVEM--NVIIWNTIAGGCLHSGNFRG 301
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L+S + +S + +D+ L AC ++ + ++HG V + +++ V + L
Sbjct: 302 ALQLISQMRTS-IHLDAIAMVVGLNACSHIGAI--KLGKEIHGHAVRTCFDVFDNVKNAL 358
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I +Y+R ++ A LFHR +K ++ W+ ++ G LFR+M+ + N
Sbjct: 359 ITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNY 418
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
I+SVL +C+ +A+L+ GK+ H + +K + FE+ + +L+DMY + G + + +F
Sbjct: 419 VTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFD 478
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ +RD V++T +I+G G G + + F+EM + +KP+ +T + VL+AC H+GLV +
Sbjct: 479 SLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQ 538
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+F M +G+ P LEHY CM DL G+AG + A++ I MP+KP +WA++L AC
Sbjct: 539 GQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGAC 598
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-G 660
H NT++ A +LL P+ YV+++N+YA G W L++VR + LG +KA G
Sbjct: 599 RIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPG 658
Query: 661 MSWIEVSS 668
+W++V S
Sbjct: 659 CAWVDVGS 666
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
H++ + + S L AC + + + Q+H +++ G + + I+ S L++ Y +
Sbjct: 73 HAASSHLLLHPIGSLLLACTHFKSLSQ--GKQLHAQVISLGLDQNPILVSRLVNFYTNVN 130
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A + D + W+ LI ++G A ++++M+N + +++ SVLK
Sbjct: 131 LLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLK 190
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
C G +VH E +L+ MY + G+++ LF MP RD VS
Sbjct: 191 ACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVS 250
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W II G KEA F M + ++ N I + + C H+G A + + M+
Sbjct: 251 WNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMR 310
Query: 551 PEYGLE 556
L+
Sbjct: 311 TSIHLD 316
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 240/437 (54%), Gaps = 23/437 (5%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
FE F SAL+DMYS C L AR LFD+ N+ W S+I+GYV N+ E
Sbjct: 113 FESDLFVSSALIDMYSKCGKLSNARVLFDEIPR------RNIVTWTSLITGYVQNDDAHE 166
Query: 303 AITLLSHI---------HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
A+ + G +DS S L AC + N + VHG+ + G
Sbjct: 167 ALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRV--SNKAVSEGVHGVAIKVG-- 222
Query: 354 LDYIVG--SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
LD ++G + L+D YA+ G V + ++F + +KDVV+W+ +I ++GL++ A+ +F
Sbjct: 223 LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFH 282
Query: 412 DMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M+ + N+ +S++L C+ +LR G +H +K G+ I TS+IDMY KC
Sbjct: 283 GMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKC 342
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G+ + F M E++V SWT +I G G +G A+EA+ F +MI + +KPN ITF+ VL
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVL 402
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
+AC HAG +EE W F +M EY +EP +EHY CMVDLLG+AG +A LI M + D
Sbjct: 403 AACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRD 462
Query: 591 KTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA 650
+W S+L AC H + +L I A +L P + YV+L+N+YA G W + ++R
Sbjct: 463 FVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRIL 522
Query: 651 GKKLG-EKKAGMSWIEV 666
K G K G S +E+
Sbjct: 523 VKDRGLVKPPGYSLVEL 539
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 21/290 (7%)
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+N N+ K FD+ ++ WNS+I+ + E++ S + +
Sbjct: 30 TNTNLTTLFNKYFDRTDVYS---------WNSLIAELARGGDSCESLRAFSWMRKLDIKP 80
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ TF A+K+C L + NS Q H + G+E D V S LID+Y++ G + +A
Sbjct: 81 NRSTFPCAIKSCSALFDLNS--GKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARV 138
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD---------VNQFIISSV 428
LF +P++++V W+ LI G ++ A ++F++ + + V+ + SV
Sbjct: 139 LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
L CS +++ + VH +K G +K +L+D Y KCGE+ +F M E+DV
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258
Query: 489 VSWTGIIVGCGQNGRAKEAIAYFQEMIQS-RLKPNEITFLGVLSACRHAG 537
VSW +I QNG + +A F M+++ K NE+T +L AC H G
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 180/465 (38%), Gaps = 123/465 (26%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A++ C + GK H + + +G D+F + L+ MY+ L++A LFDE+ R+N
Sbjct: 88 AIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRN 147
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG---------FMYSAVLKACSLSG 119
IV+WT+++T Y N + A+ ++ L + E NG +VL ACS
Sbjct: 148 IVTWTSLITGYVQNDDAHEALMVFKEFL-FEKSEGNGEEVGTSVDSVAMISVLSACSRVS 206
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVAL 177
+ + +H + L+ + NTLLD Y KCG SL+RK+FD A +V
Sbjct: 207 NKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM------AEKDVVS 260
Query: 178 WNSMLS----------------------GGKQ-----------------------VHAFC 192
WNSM++ GGK +H
Sbjct: 261 WNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQV 320
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
+K G+ + TS+IDMY KCG+ + F+ M E++V SWT +I G
Sbjct: 321 IKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAG----------- 369
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y EA +F Q +W + Y+
Sbjct: 370 ----YGMHGFAREALDVFYQ------------MIWAGVKPNYI----------------- 396
Query: 313 SGMCIDSYTFTSALKAC--INLLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
TF S L AC L R F H V G E Y ++DL R
Sbjct: 397 --------TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE-HY---GCMVDLLGRA 444
Query: 370 GNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
G +K A L + ++D V W L+ C H LA + R++
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISAREL 489
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 190/502 (37%), Gaps = 128/502 (25%)
Query: 58 HKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
+K FD R ++ SW +++ ++R ++ M + ++PN + +K+CS
Sbjct: 39 NKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKL-DIKPNRSTFPCAIKSCSA 94
Query: 118 SGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNV 175
DL+ G+ H++ E D + + L+DMY KCG L+ R LFD+ N+
Sbjct: 95 LFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR------RNI 148
Query: 176 ALWNSMLSGGKQ------------------------------------------------ 187
W S+++G Q
Sbjct: 149 VTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNK 208
Query: 188 -----VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
VH +K G +K +L+D Y KCGE+ +F+ M E+DVVSW +I
Sbjct: 209 AVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIA-- 266
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+Y+ + +A ++F Y V L S +L +E
Sbjct: 267 -------------VYAQNGLSTDAFEVFHGMLKAGGGKYNEVTL-----STLLLACAHEG 308
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ + GMC+ H ++ GY + I+ +++
Sbjct: 309 ALRV-------GMCL--------------------------HDQVIKMGYVNNVIMATSI 335
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+Y + G + A F + +K+V +W+ +I G HG A +F MI + N
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395
Query: 423 FIISSVLKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
SVL CS L G H + V+ G E ++D+ + G I +
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH----YGCMVDLLGRAGYIKEAY 451
Query: 478 ALFKFMP-ERDVVSWTGIIVGC 498
L K M RD V W ++ C
Sbjct: 452 NLIKSMKVRRDFVLWGSLLAAC 473
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C + + + +H IK GL + + N LL YA ++ + K+
Sbjct: 190 VDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV 249
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD+MA K++VSW +M+ Y N A +++ ML+ G + N S +L AC+ G
Sbjct: 250 FDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGA 309
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALW 178
L +G +H+++ + + ++ +++DMY KCG + R FD NV W
Sbjct: 310 LRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKE------KNVRSW 363
Query: 179 NSMLSGGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+M++ G +H F + G + +T S++ G +++G FN M
Sbjct: 364 TAMIA-GYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM 421
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 274/529 (51%), Gaps = 66/529 (12%)
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------CF-- 243
+K + T+LI Y + G +++ +LF+ MPERDVV+WT +I G CF
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHE 101
Query: 244 -----------------------------------------ECSCFTLSALVDMYSNCNV 262
E S + +AL++MY+ C+V
Sbjct: 102 MFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSV 161
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
EA L + N W ++I+G+ + + + + Y
Sbjct: 162 TMEAAFLI-----FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCI 216
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
T A++A ++ + + Q+H +V G++ + V ++++D Y R G + A FH +
Sbjct: 217 TIAVRASASIDSVTT--GKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEM 274
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
KD++ W+ LI + +S A L+F+ + N + +S++ C+ +A+L G+
Sbjct: 275 EDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQ 333
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQN 501
Q+H +RGF K +LIDMY KCG+I D +F + ER ++VSWT +++G G +
Sbjct: 334 QLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSH 393
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G EA+ F +M+ S ++P+ I F+ VLSACRHAGLVE+ F M+ EYG+ P +
Sbjct: 394 GYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDI 453
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS-IIAEQLLAT 620
Y C+VDLLG+AG +A +L+ MPFKPD++ W ++L AC+ H +T L+S + A++++
Sbjct: 454 YNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMEL 513
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
P YVMLS +YA G W ++VRK + +G KK AGMSWIEV +
Sbjct: 514 KPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVEN 562
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 180/462 (38%), Gaps = 115/462 (24%)
Query: 41 GNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS 100
NL+ Y + + +A LFDEM +++V+WT M+T Y S+ + A ++ M + G
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGR 107
Query: 101 VEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL 160
PN F S+VLK+C L G L+H + + +E + N L++MY C
Sbjct: 108 -SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 161 FDQYSN--------WA---------ASAYGNVALWNSML--------------------- 182
F + + W G + ++ ML
Sbjct: 167 FLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASI 226
Query: 183 ---SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ GKQ+HA VKRGF+ + S++D Y +CG + + F+ M ++D+++W +I
Sbjct: 227 DSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLI 286
Query: 240 VGC-------------------FECSCFTLS----------------------------- 251
F +C+T +
Sbjct: 287 SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNK 346
Query: 252 ------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
AL+DMY+ C + ++ ++F + N+ W SM+ GY + EA+
Sbjct: 347 NVELANALIDMYAKCGDIPDSERVFGEIEERR-----NLVSWTSMMIGYGSHGYGAEAVE 401
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN---- 361
L + SSG+ D F + L AC L GL + E +Y + +
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSAC-------RHAGLVEKGLKYFNVMESEYGINPDRDIY 454
Query: 362 --LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
++DL R G + A EL R+P K D W ++ C H
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 25/245 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I A+R S+ GK +H ++K G ++ N++L Y L++A + F EM
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEME 275
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K++++W T+++ + A+ ++ G V PN + +++++ AC+ L+ G+
Sbjct: 276 DKDLITWNTLISELERSDSSE-ALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQ 333
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML- 182
+H RI R + L N L+DMY KCG + + ++F + N+ W SM+
Sbjct: 334 QLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERR-----NLVSWTSMMI 388
Query: 183 ------SGGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM------- 227
G + V F V G + + +++ G ++ GL FN M
Sbjct: 389 GYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGIN 448
Query: 228 PERDV 232
P+RD+
Sbjct: 449 PDRDI 453
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 234/414 (56%), Gaps = 10/414 (2%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L++ YS + + ++F++ +++ W+S+IS + NE+ AI +
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTT------WSSVISSFAQNEEPVLAIQYFCRMIG 148
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+C D + F SA KAC L + VH L++ +GY++D VGS+L+D+YA+ G++
Sbjct: 149 ENLCPDDHIFPSATKACAILGRCD--VGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDI 206
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
K A +F +P ++VV+WSG+I G T+ G + A LF++ + DVN F +SSV++VC
Sbjct: 207 KEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVC 266
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
L GKQ+H C K ++ +SLI +Y KCG I+ +F +P +++ W
Sbjct: 267 GSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWN 326
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+++ C Q+ KEA F +M + ++PN ITFL VL AC HAGLVEE F MK +
Sbjct: 327 AMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMK-K 385
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
Y +EP +HY MVDLLG+AG +A +I MP +P +++W + + C H NT L +
Sbjct: 386 YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAF 445
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
A+++ +VMLSN YA G ++ +K RK + G KK G+SWIE
Sbjct: 446 AADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIE 499
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 4/268 (1%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+H I+ SG ++ +V LI+ Y++ + ++F +K WS +I ++
Sbjct: 75 QIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNE 134
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
LA F MI N + I S K C+ L GK VH +K G++ + +
Sbjct: 135 EPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGS 194
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
SL+DMY KCG+I + +F MP R+VVSW+G+I G Q G +EA+ F+E + L
Sbjct: 195 SLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDV 254
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N+ T V+ C A L+E I K Y L + ++ L + G + A +
Sbjct: 255 NDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGS--SLISLYSKCGLIEGAYR 312
Query: 581 LIAEMPFKPDKTIWASMLKACETHNNTK 608
+ E+P K + +W +ML AC H +TK
Sbjct: 313 VFDEVPIK-NLGMWNAMLIACAQHAHTK 339
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 181/435 (41%), Gaps = 100/435 (22%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ RS+ +G+ +H IIK GL + L++ Y+ + ++F+E RK+ +W++
Sbjct: 66 RSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSS 125
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
+++++ N+ P AI+ + M+ ++ P+ ++ + KAC++ G D+G+ +H + +
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGE-NLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKT 184
Query: 135 KLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAASAYGNVALWN-------- 179
+ D + ++L+DMY KCG + R +FD+ + W+ YG L
Sbjct: 185 GYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLF 244
Query: 180 -------------------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
++L GKQ+H C K ++ +SLI +Y KC
Sbjct: 245 KEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKC 304
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G I+ +F+ +P +++ W +++ C +
Sbjct: 305 GLIEGAYRVFDEVPIKNLGMWNAMLIACAQ------------------------------ 334
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INL 332
+ +EA L + + ++GM + TF L AC L
Sbjct: 335 ----------------------HAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGL 372
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WS 391
+ ++ + + G + Y ++++DL R G ++ AL + +P + + W
Sbjct: 373 VEEGKKYFALMKKYEIEPGTQ-HY---ASMVDLLGRAGKLQEALSVIKGMPTEPTESVWG 428
Query: 392 GLIMGCTKHGLNSLA 406
I GC HG LA
Sbjct: 429 AFITGCRIHGNTDLA 443
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 18/240 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R CG ++ GK +H K F G++L+S+Y+ + A+++FDE+ KN+
Sbjct: 263 IRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNL 322
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
W M+ A + A L+ M E + PN + VL ACS +G ++ G+
Sbjct: 323 GMWNAMLIACAQHAHTKEAFDLFTKM-ENAGMRPNFITFLCVLYACSHAGLVEEGKKYFA 381
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLF--------DQYSNWAASAYGNVALWNSM 181
+ + ++E T +++D+ + G L L S W A G
Sbjct: 382 LMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITG------CR 435
Query: 182 LSGGKQVHAFCVKRGFEKEDVT---LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
+ G + AF + FE V+ L + Y G +D + +R V TG+
Sbjct: 436 IHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGL 495
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
SL +G+Q+HA +K G + + LI+ Y K +F+ + +W+ +I
Sbjct: 69 SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGL 555
QN AI YF MI L P++ F AC G + ++ +K Y +
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ + +VD+ + G +A + EMP + + W+ M+
Sbjct: 189 DVFVGS--SLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMI 228
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 188/705 (26%), Positives = 323/705 (45%), Gaps = 102/705 (14%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + I G +H +IK G D++ L++ Y L A+++F EM
Sbjct: 139 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE 198
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W + +++ + L+ M ++ ++ VL+AC G L+ + IH
Sbjct: 199 ALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGALNAAKQIH 257
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYG------------- 173
+ R L+ D L N L+ MY K G L R++FD N S++
Sbjct: 258 GYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 317
Query: 174 ----------------NVALWNSMLSGGKQVHAF------CVKR----GFEKEDVTLTSL 207
++ WN +LSG +H + ++R GF+ ++TS+
Sbjct: 318 DAWSLFYELESSDMKPDIVTWNCLLSG-HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSV 376
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ + G ++ G + ++ F+C + ++L+DMY + L A+
Sbjct: 377 LQAISELGFLNMGKETHGY-----------VLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 425
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+FD + N+ WNS++SGY E+A+ LL+ + G+
Sbjct: 426 AVFDNMKN------RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI------------ 467
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--- 384
+ D + + +I YA G K AL + H+
Sbjct: 468 -------------------------KPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGL 502
Query: 385 -KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
+VV+W+ LI G ++ G N + F M N I+ +L+ C+ L+ L++GK+
Sbjct: 503 TPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE 562
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
+H ++ GF ++ T+LIDMY K + + +F+ + + + SW +I+G G
Sbjct: 563 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 622
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
KEAI+ F EM + + P+ ITF +LSAC+++GL+ E W F SM +Y + P LEHY
Sbjct: 623 GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC 682
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
CMVDLLG+AG D+A LI MP KPD TIW ++L +C H N K A+ L P
Sbjct: 683 CMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPN 742
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGM-SWIEVS 667
+ + Y+++ N+Y+ W+ + +R+ G + + SWI+++
Sbjct: 743 NSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN 787
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 234/559 (41%), Gaps = 95/559 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L+ CG+ ++ K +H + ++GL D+ N L+SMY+ L A ++FD M
Sbjct: 237 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 296
Query: 66 RKNIVSWTTMVTAY-----------------TSNKRPN---WAIRLYNHML--------- 96
+N SW +M+++Y +S+ +P+ W L H L
Sbjct: 297 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 356
Query: 97 -----EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ +PN ++VL+A S G L++G+ H + R + D + +L+DMYV
Sbjct: 357 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 416
Query: 152 KCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLID 209
K SLT + +FD N N+ WNS++SG
Sbjct: 417 KNHSLTSAQAVFDNMKN------RNIFAWNSLVSG------------------------- 445
Query: 210 MYLKCGEIDDGLALFNFMPER----DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
Y G +D L L N M + D+V+W G+I G C E
Sbjct: 446 -YSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGK---------------E 489
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A + Q S + NV W ++ISG N +++ + + G+ +S + T
Sbjct: 490 ALAVLHQTKSLGLTP--NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCL 547
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+AC +L ++H L + +G+ D V + LID+Y++ ++K+A ++F R+ K
Sbjct: 548 LRACASLSLLQK--GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 605
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQV 444
+ +W+ +IMG GL A +F +M + +++L C + G K
Sbjct: 606 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF 665
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGR 503
+ ++D+ + G +D+ L MP + D W ++ C +
Sbjct: 666 DSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKN 725
Query: 504 AKEAIAYFQEMIQSRLKPN 522
K A + + +L+PN
Sbjct: 726 LKFAETAAKNLF--KLEPN 742
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/570 (21%), Positives = 229/570 (40%), Gaps = 99/570 (17%)
Query: 18 SIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
S+ K +H ++IK + NL+S Y F A +F +N + W + V
Sbjct: 45 SLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFV 104
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ S+ + L V + +YS LK C+ D+ LG IH + +
Sbjct: 105 EEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF 164
Query: 137 EYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN--------------- 179
+ D L L++ Y +C L + ++F + N A + + N
Sbjct: 165 DLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRK 224
Query: 180 -----------------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
L+ KQ+H + + G + + LI MY K G+
Sbjct: 225 MQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGK 284
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
++ +F+ M R+ SW ++++ Y+ L +A LF Y
Sbjct: 285 LELARRVFDSMENRNTSSW---------------NSMISSYAALGFLNDAWSLF--YELE 327
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
++ ++ WN ++SG+ L+ EE + +L + G +S + TS L+A L N
Sbjct: 328 SSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 387
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
+ HG ++ +G++ D VG++LID+Y + ++ SA +F + +++ AW+ L+ G
Sbjct: 388 --MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSG 445
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
+ G +F D +LR Q+ K G + +
Sbjct: 446 YSFKG-------MFED------------------------ALRLLNQME----KEGIKPD 470
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPE----RDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+T +I Y G + LA+ +VVSWT +I G Q G ++++ +F
Sbjct: 471 LVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFA 530
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+M Q + PN + +L AC L+++
Sbjct: 531 QMQQEGVMPNSASITCLLRACASLSLLQKG 560
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 111/242 (45%), Gaps = 5/242 (2%)
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL--FRDMINSNQ 418
NLI Y G+ SA +F+ ++ + W+ + K SL +L F+++
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEE-FKSSAGSLHIVLEVFKELHGKGV 129
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLA 478
+ + S LK C+ + + G ++H +KRGF+ + +L++ Y +C ++
Sbjct: 130 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 189
Query: 479 LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
+F MP + + W I+ Q+ + ++ + F++M S LK T + VL AC G
Sbjct: 190 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 249
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ A I + +GL+ + ++ + + G + A ++ M + + + W SM+
Sbjct: 250 LNAAKQIHGYVF-RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR-NTSSWNSMI 307
Query: 599 KA 600
+
Sbjct: 308 SS 309
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/743 (26%), Positives = 345/743 (46%), Gaps = 117/743 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD LR CG +S+ +G +H ++ + G+ +D + GNNL+ MY + + A ++
Sbjct: 1 MDSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREI 60
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD++ +N+ SWT M++AY N A+ L ++ ++ + PN + +L ACS GD
Sbjct: 61 FDKLIDRNVYSWTIMLSAYAQNGHYMEALVL-SYQMDLEGIRPNSVTFLWILGACSNLGD 119
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SA 171
++ GR IH R+ + DTV+ +L MY KC L +K+FD +W A +A
Sbjct: 120 VETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITA 179
Query: 172 YGNVA--------LWNSMLSG-----------------------GKQVHAFCVKRGFEKE 200
+ + W L G G +++ + G+ +
Sbjct: 180 FSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGAD 239
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------------------- 241
++ + MY + G + + A F+ + E+ SW I+
Sbjct: 240 VFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDV 299
Query: 242 -----------CFECSCFTL----------------------SALVDMYSNCNVLCEARK 268
C +C +L SA+V MY+ C + A
Sbjct: 300 HGAEPDTFTHVCLLGACSSLGALEEGERIHARMGDKPDGLAGSAIVAMYAKCGGIEHAMT 359
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
F + SS NV +WN++I+GYV E +EA+ L ++ G+ D YTF+S L A
Sbjct: 360 AFTKMSS------SNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGA 413
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C + + A VH IV+ G E+ + + L++++A+ G++ ALE+F + ++ V
Sbjct: 414 CSGAKDLSEGRA--VHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTV 471
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS--CLASLRRGKQVHA 446
+W+ ++ +HG A+ LF++M+ + ++ +S+L CS +SL +GK +H
Sbjct: 472 SWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQ 531
Query: 447 FCVKRGFEKEDITLTSLIDMYL-----KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
G + + T L+ MYL KCG +DD A+F + ++V+SWT +IVG Q+
Sbjct: 532 RITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQH 591
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
R A+ F+EM ++ +EITF +L AC H GLV F SM ++ + P EH
Sbjct: 592 ARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEH 651
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL--- 618
Y ++D+L +AG +AE++ P + +++ + + H S++A + L
Sbjct: 652 YNVVMDMLARAGRVGEAEEVAKVFPAIKHVALM-TLVSSSQVHGVDS--SVVARKRLLLQ 708
Query: 619 ---ATSPEDPSKYVMLSNVYATL 638
+ + S Y+ LSN + +
Sbjct: 709 GDGSCEKDTASSYIALSNSFKSF 731
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 173/348 (49%), Gaps = 10/348 (2%)
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+DS ++ L+ C L+ + +++H + SG + D +G+NLI +Y G V A
Sbjct: 1 MDSASYGRLLRECG--LSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAR 58
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
E+F +L ++V +W+ ++ ++G A +L M N +L CS L
Sbjct: 59 EIFDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLG 118
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
+ G+++HA V G++ + + T+++ MY KC ++ D +F + +DVVSWT II
Sbjct: 119 DVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIIT 178
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGL 555
Q GR + A+ F EM +KPNE TF+ +L+AC + +E+ ++ ++ YG
Sbjct: 179 AFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGA 238
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN-TKLVSIIA 614
+ + V + + G +A+ + K + W ++++A H + ++ +S+
Sbjct: 239 DVFVGS--TAVTMYSRFGNLVEAKAAFDHLREKSTGS-WNAIVRAYIQHGHISQALSLYK 295
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMS 662
E + + D +V L ++LG +L + + ++G+K G++
Sbjct: 296 EMDVHGAEPDTFTHVCLLGACSSLG---ALEEGERIHARMGDKPDGLA 340
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 298/588 (50%), Gaps = 55/588 (9%)
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN-TLLDMYVKCGSLTR 158
+ P+ F + +++A G +L H R L + V + +L+ Y++ G +
Sbjct: 64 PLRPDSFTFPPLVRAAP--GPASAAQL-HACALRLGLLHPNVFASGSLVHAYLRFGRVAE 120
Query: 159 --KLFDQYSNWAASAYGNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSL 207
++FD+ +V WN+MLSG + V G + VTL+S+
Sbjct: 121 AYRVFDEMPER------DVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSV 174
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ M + G D LAL V + F +AL+D+Y +L EA
Sbjct: 175 LPMCVVLG--DRALAL---------VMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAH 223
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE---AITLLSHIHSSGMCIDSYTFTS 324
+F A ++ WNS+IS NEQ + A+ L + SG+C D T S
Sbjct: 224 WVF------GGMALRDLVTWNSIISA---NEQGGKVAAAVELFHGMMESGVCPDVLTLVS 274
Query: 325 ---ALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSNLIDLYARLGNVKSALELFH 380
A+ C + L S VH + G+++ D I G+ ++D+YA++ + +A ++F
Sbjct: 275 LASAVAQCGDELGAKS-----VHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFD 329
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLR 439
LP +DVV+W+ LI G ++GL + A ++ DM N Q SVL S L L+
Sbjct: 330 NLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQ 389
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
+G ++HA +K G + T LID+Y KCG++ + + LF+ MP R W II G G
Sbjct: 390 QGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLG 449
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G +A++ F +M Q +KP+ +TF+ +L+AC HAGLV++ + F M+ YG+ P
Sbjct: 450 VHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIA 509
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
+HY CMVD+LG+AG D+A + I MP KPD +W ++L AC H N ++ + ++ L
Sbjct: 510 KHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 569
Query: 620 TSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
PE+ YV++SN+YA +G WD + VR ++ +K G S +EV
Sbjct: 570 LDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEV 617
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/561 (23%), Positives = 223/561 (39%), Gaps = 120/561 (21%)
Query: 25 LHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNK 83
LH ++ GL ++F +L+ Y F + +A+++FDEM +++ +W M++ N
Sbjct: 88 LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNT 147
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
R A+ L M+ G V + S+VL C + GD L ++H + L + +
Sbjct: 148 RAADAVTLLGRMVGEG-VAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL-----WNSMLS--------------- 183
N L+D+Y K G LT ++W +G +AL WNS++S
Sbjct: 207 NALIDVYGKLGMLTE------AHW---VFGGMALRDLVTWNSIISANEQGGKVAAAVELF 257
Query: 184 -----------------------------GGKQVHAFCVKRGFEKEDVTL-TSLIDMYLK 213
G K VH + +RG++ D+ +++DMY K
Sbjct: 258 HGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAK 317
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
+ID +F+ +P+RDVVSW +I G
Sbjct: 318 MSKIDAAQKVFDNLPDRDVVSWNTLITG-------------------------------- 345
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS-SGMCIDSYTFTSALKACINL 332
Y+ N EAI + + +H+ G+ TF S L A L
Sbjct: 346 --------------------YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+++H L + +G LD V + LIDLYA+ G + A+ LF +P++ W+
Sbjct: 386 GGLQQ--GMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNA 443
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC-VKR 451
+I G HG + A LF M + S+L CS + +G+
Sbjct: 444 IIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVY 503
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAY 510
G T ++DM + G++D+ + MP + D W ++ C +G +
Sbjct: 504 GIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVA 563
Query: 511 FQEMIQSRLKPNEITFLGVLS 531
Q + + L P + + ++S
Sbjct: 564 SQNLFE--LDPENVGYYVLMS 582
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 17/237 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHK 59
+ L + A+ CG KS+HC + + G DI GN ++ MYA + ++ A K
Sbjct: 270 LTLVSLASAVAQCGDELG---AKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQK 326
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD + +++VSW T++T Y N N AIR+YN M + ++P + +VL A S G
Sbjct: 327 VFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLG 386
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
L G +H + L D + L+D+Y KCG L +F + + + G WN
Sbjct: 387 GLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMF-LFEHMPRRSTGP---WN 442
Query: 180 SMLSG----GKQVHAFCVKRGFEKED-----VTLTSLIDMYLKCGEIDDGLALFNFM 227
++++G G A + ++E+ VT SL+ G +D G + F+ M
Sbjct: 443 AIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLM 499
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 268/518 (51%), Gaps = 57/518 (11%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
GK VH G ++ + L + LI+MY KCG+ +F+ M R++ SW G++ G
Sbjct: 69 GKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSG-- 126
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
Y+ + ARKLFD+ +V WN+M+ Y + +A
Sbjct: 127 -------------YAKLGKIKPARKLFDKMPE------KDVVSWNTMVIAYAKSGFCNDA 167
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ + G+ + Y+F L C+ + + Q HG ++ +G+ + ++ S+++
Sbjct: 168 LRFYRELRRLGIGYNEYSFAGLLNICVKVKELE--LSKQAHGQVLVAGFLSNLVISSSVL 225
Query: 364 DLYARL-------------------------------GNVKSALELFHRLPKKDVVAWSG 392
D YA+ G+V++A ELF +P+K+ VAW+
Sbjct: 226 DAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTS 285
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
LI G +H L A LF M+ N +QF SS L + +ASL GKQ+H + ++
Sbjct: 286 LIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTN 345
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYF 511
I ++SLIDMY KCG ++ G +F M ++ DVV W II Q+GR +EAI F
Sbjct: 346 IRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMF 405
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+M++ +KP+ IT + +L+AC H+GLV+E ++ S+ +G+ P+ EHY C++DLLG+
Sbjct: 406 DDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGR 465
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG FD + +MP KP+ IW ++L C H N + +AE+++ P+ + YV+L
Sbjct: 466 AGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLL 525
Query: 632 SNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
S+++A +G W+ + VR+ ++ K +SWIE+ +
Sbjct: 526 SSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIEN 563
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 177/431 (41%), Gaps = 109/431 (25%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
++++++ N +LS YA + A KLFD+M K++VSW TMV AY + N A+R Y
Sbjct: 114 TRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRE 173
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
+ G + N + ++ +L C +L+L + H ++ + V+ +++LD Y KC
Sbjct: 174 LRRLG-IGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCS 232
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
+ R+LFD+ +V W +M+SG Y
Sbjct: 233 EMGDARRLFDEM------IIRDVLAWTTMVSG--------------------------YA 260
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVG------------------------------- 241
+ G+++ LF+ MPE++ V+WT +I G
Sbjct: 261 QWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSS 320
Query: 242 --CFECSCFTL----------------------SALVDMYSNCNVLCEARKLFDQYS-SW 276
C S +L S+L+DMYS C L R +FD W
Sbjct: 321 CLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKW 380
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLN 334
+V LWN++IS + + +EAI + + GM D T L AC + L+
Sbjct: 381 ------DVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQ 434
Query: 335 FNSRFALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
R + HG+I + + LIDL R G+ + + ++P K + W
Sbjct: 435 EGLRLYESITSCHGVIPNQEHY------ACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIW 488
Query: 391 SGLIMGCTKHG 401
+ L+ C HG
Sbjct: 489 NALLGVCRMHG 499
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 161/356 (45%), Gaps = 72/356 (20%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + ++ K H +++ G ++ +++L YA + + DA +LFDEM +++++W
Sbjct: 193 CVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAW 252
Query: 73 TTMVTAYTS---------------NKRP-NW---------------AIRLYNHMLEYGSV 101
TTMV+ Y K P W A+ L+ M+ ++
Sbjct: 253 TTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMAL-NI 311
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RK 159
P+ F +S+ L A + L+ G+ IH + R + +T+++++L+DMY KCG L R
Sbjct: 312 RPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRL 371
Query: 160 LFDQYSN-WAASAYGNVALWNSMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLID 209
+FD + W +V LWN+++S G + + F V+ G + + +TL L++
Sbjct: 372 VFDLMGDKW------DVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLN 425
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC----NVLCE 265
G + +GL L+ + S G+I +C L+D+ ++ +
Sbjct: 426 ACSHSGLVQEGLRLY-----ESITSCHGVIPNQEHYAC-----LIDLLGRAGHFDTLMNQ 475
Query: 266 ARKLFDQYSS--WAA-----SAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSS 313
K+ + + W A +GN+ + + L+ Q+ A LLS IH++
Sbjct: 476 LEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAA 531
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 253/466 (54%), Gaps = 21/466 (4%)
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ S++ CG++ G A V +G+ C + L+DMY+ C VL
Sbjct: 1 MVSILQACANCGDVSLGRA----------VHGSGV-KACVHWKTTFCNTLLDMYAKCGVL 49
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
A +FD S V W S+I+ Y ++EAI L + G+ D +T T
Sbjct: 50 DGAILVFDLMS------VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTIT 103
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
+ L AC N + VH I + + + V + L+D+YA+ G+++ A +F +P
Sbjct: 104 TVLHACA--CNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP 161
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
KD+++W+ +I G +K+ L + A LF DM+ + + ++ +L C+ LASL RGK+
Sbjct: 162 VKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKP-DGTTLACILPACASLASLDRGKE 220
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
VH ++ GF + +L+DMY+KCG LF +P +D+++WT +I G G +G
Sbjct: 221 VHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGF 280
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
AI F EM Q+ ++P+E++F+ +L AC H+GL++E W F M+ E ++P LEHY
Sbjct: 281 GNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA 340
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
C+VDLL ++G A + I MP +PD TIW ++L C H++ KL +AE + PE
Sbjct: 341 CIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPE 400
Query: 624 DPSKYVMLSNVYATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEVSS 668
+ YV+L+N YA W+ + K+R K G++ +K G SWIEV S
Sbjct: 401 NTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKS 446
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 179/441 (40%), Gaps = 106/441 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L+ C + G+++H +K + N LL MYA L+ A +FD M+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ +V+WT+++ AY + AIRL++ M G V P+ F + VL AC+ +G L+ G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG-VSPDIFTITTVLHACACNGSLENGK 119
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H I ++ + + N L+DMY KCGS+ D S + ++ WN+M+ G
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSME----DANSVFLEMPVKDIISWNTMIGGY 175
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GK+VH ++ GF +
Sbjct: 176 SKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQ 235
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
+L+DMY+KCG LF+ +P +D+++WT +I G
Sbjct: 236 VANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAG--------------------- 274
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ +GN AIT + + +G+ D +F
Sbjct: 275 -------------YGMHGFGN------------------NAITTFNEMRQAGIEPDEVSF 303
Query: 323 TSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
S L AC + LL+ RF V +L++ + ++DL AR G + A +
Sbjct: 304 ISILYACSHSGLLDEGWRF-FNVMQDECNVKPKLEHY--ACIVDLLARSGKLAMAYKFIK 360
Query: 381 RLP-KKDVVAWSGLIMGCTKH 400
+P + D W L+ GC H
Sbjct: 361 SMPIEPDATIWGALLSGCRIH 381
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ I L C S++ GK +H I + + +IF N L+ MYA S+ DA+ +F
Sbjct: 98 DIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF 157
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
EM K+I+SW TM+ Y+ N PN A+ L+ M+ ++P+G + +L AC+ L
Sbjct: 158 LEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL--EMKPDGTTLACILPACASLASL 215
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS-----NWAA--SAY 172
D G+ +H I R D + N L+DMYVKCG L R LFD W + Y
Sbjct: 216 DRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGY 275
Query: 173 GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G N+ ++ ++ + G E ++V+ S++ G +D+G FN M +
Sbjct: 276 GMHGFGNNAITTFNEMR----QAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQD 328
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 214/776 (27%), Positives = 359/776 (46%), Gaps = 133/776 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND-AHKLFDEM 64
++ A + CG+ +K G +H + K D+ N L+SMY + + D A + FD +
Sbjct: 180 VIRACQECGEY-GLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSI 238
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY---GSVEPNGFMYSAVLKA-CSL--S 118
+N+VS +M++ Y A +++ M + ++PN + + +++ A CSL S
Sbjct: 239 WPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANS 298
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
G + L +L+ R+ + +D + + L+ + K GS+ + +F + S Y NV
Sbjct: 299 GLVLLEQLL-TRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMS------YRNVV 351
Query: 177 LWNSMLSG-----------------------------------------------GKQVH 189
N ++ G G +VH
Sbjct: 352 SLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVH 411
Query: 190 AFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII--------- 239
AF ++ G + + LI+MY KCG I+D +F M +D V+W +I
Sbjct: 412 AFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQF 471
Query: 240 ---VGCFE------------------CSCFTL-------------------------SAL 253
V F+ SC +L +AL
Sbjct: 472 LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNAL 531
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE-EAITLLSHIHS 312
+ +Y C + E +K F Y +V+ WNS+I +E + EA+ +
Sbjct: 532 LALYGECGYVKECQKAFSLMLD-----YDHVS-WNSLIGALADSEPSMLEAVESFLVMMR 585
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+G + TF + L A ++ L+ + Q+H L++ D + + L+ Y + G++
Sbjct: 586 AGWDPNRVTFITIL-AAVSSLSLH-ELGKQIHALVLKRNVAADTAIENALLACYGKCGDM 643
Query: 373 KSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+F R+ ++D V+W+ +I G + L A + M+ Q ++ F ++VL
Sbjct: 644 GYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSA 703
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ +A+L RG +VH V+ E + + ++L+DMY KCG ID F+ MP R++ SW
Sbjct: 704 CATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSW 763
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I G ++G +++ F +M P+ +TF+GVLSAC HAGLV E ++ F SM
Sbjct: 764 NSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSE 823
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKL 609
YGL P +EH+ CMVDLLG+ G + E + +MP KP+ IW ++L AC N NT L
Sbjct: 824 IYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTAL 883
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKK-LGEKKAGMSWI 664
AE LL P + Y++LSN+YA+ G WD ++K R A +K +K+AG SW+
Sbjct: 884 GRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWV 939
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 273/603 (45%), Gaps = 46/603 (7%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
K + LH ++ K G D+F N L+++YA L K+FDEM +N+VSW+ +++ Y
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHERITREKLE 137
T N+ PN A L+ M+ G + PN + + +V++AC G+ L G IH +++ +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFM-PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 138 YDTVLMNTLLDMYVKCGSLT---RKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHA 190
D N L+ MY + R+ FD S W N+ NSM+S G V A
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFD--SIWPR----NLVSLNSMISVYCQRGDAVSA 262
Query: 191 FCVKRGFEKE---------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
F + +KE + T SLI C + GL L + R V +G
Sbjct: 263 FDIFSTMQKEVMGDGLKPNEYTFGSLISA--TCSLANSGLVLLEQLLTR--VEKSG---- 314
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
F + SALV ++ + A+ +F + S Y NV N +I G V ++ E
Sbjct: 315 -FLHDLYVGSALVSGFAKAGSIGYAKNIFQKMS------YRNVVSLNGLIIGLVRQKRGE 367
Query: 302 EAITLLSHIHSS-GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVG 359
EA+ L + S + +SY ++L R +VH ++ SG +G
Sbjct: 368 EAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIG 427
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ LI++YA+ G + A +F + KD V W+ +I G ++ A F++M +
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F + S L C+ L + G+Q+H +K G + + +L+ +Y +CG + +
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAK-EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F M + D VSW +I + + EA+ F M+++ PN +TF+ +L+A L
Sbjct: 548 FSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSL 607
Query: 539 VEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
E I +K + +E+ ++ G+ G E + + M + D+ W SM
Sbjct: 608 HELGKQIHALVLKRNVAADTAIEN--ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSM 665
Query: 598 LKA 600
+
Sbjct: 666 ISG 668
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
S+ A ++H + +G+ D + + LI++YAR+G++ S ++F +P +++V+WS LI G
Sbjct: 89 SKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISG 148
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA--SLRRGKQVHAFCVKRGFE 454
T++ + + A LFR M++ N + SV++ C L+ G Q+H K +
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 455 KEDITLTSLIDMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF-- 511
+ LI MY G +D F + R++VS +I Q G A A F
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268
Query: 512 --QEMIQSRLKPNEITFLGVLSA 532
+E++ LKPNE TF ++SA
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISA 291
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 234/413 (56%), Gaps = 9/413 (2%)
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+M + VL RK+FD+ +V WN+++ G + ++ EA+ L+ + G
Sbjct: 115 EMDGSAVVLESVRKVFDEMPE------KDVVSWNTLVLGCAESGRHGEALGLVREMWRDG 168
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
DS+T +S L I + R +++HG +G+ D VGS+LID+YA
Sbjct: 169 CKPDSFTLSSVLP--IFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDY 226
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSC 434
++++F LP +D + W+ ++ GC ++G A LFR M++S SS++ C
Sbjct: 227 SVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGN 286
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
LASL GKQ+HA+ ++ GF+ +SLIDMY KCG + +F + D+VSWT +
Sbjct: 287 LASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAM 346
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I+G +G A+EA+ F M LKPN ITFL VL+AC HAGLV++ W F SM YG
Sbjct: 347 IMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYG 406
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
+ P LEH+ + D LG+ G ++A I+ M KP ++W+++L+AC+ H NT L +A
Sbjct: 407 IVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVA 466
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+++ P +++LSN Y++ G W+ + +RK+ +K G +K+ SWIEV
Sbjct: 467 KKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEV 519
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 122/299 (40%), Gaps = 67/299 (22%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--------- 53
L + AL+ C G SLH ++ G D F N LL++Y +
Sbjct: 58 LTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMD 117
Query: 54 -----LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMY 108
L K+FDEM K++VSW T+V + R A+ L M G +P+ F
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDG-CKPDSFTL 176
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKC--GSLTRKLFDQYSN 166
S+VL + D+ G +H TR D + ++L+DMY C + K+FD
Sbjct: 177 SSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNL-- 234
Query: 167 WAASAYGNVALWNSMLSG------------------------------------------ 184
+ LWNSML+G
Sbjct: 235 ----PVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASL 290
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQ+HA+ ++ GF+ +SLIDMY KCG + +F+ + D+VSWT +I+G
Sbjct: 291 LLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMG 349
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+++G LH + G D+F G++L+ MYA+ T + + K+FD + ++ + W +M+
Sbjct: 189 VRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG 248
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
N + A+ L+ ML G ++P +S+++ AC L LG+ +H + R +
Sbjct: 249 CAQNGSVDEALGLFRRMLHSG-IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDG 307
Query: 139 DTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFC 192
+ + ++L+DMY KCG S+ R++FD+ + ++ W +M+ G G A
Sbjct: 308 NVFISSSLIDMYCKCGNVSIARRIFDRIQS------PDIVSWTAMIMGHALHGPAREALV 361
Query: 193 VKRGFE-----KEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+ E +T +++ G +D G FN M +
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSD 403
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG S+ GK LH +I+ G ++F ++L+ MY +++ A ++FD + +IVSW
Sbjct: 284 CGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSW 343
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
T M+ + + A+ L++ M E G+++PN + AVL ACS +G +D G
Sbjct: 344 TAMIMGHALHGPAREALVLFDRM-ELGNLKPNHITFLAVLTACSHAGLVDKG 394
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID------DGLA 478
+ LK C+ L G +HA ++ G + +L+++Y K DG A
Sbjct: 61 LPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSA 120
Query: 479 --------LFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
+F MPE+DVVSW +++GC ++GR EA+ +EM + KP+ T VL
Sbjct: 121 VVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
V + G + ++D+ D + ++ +P + D
Sbjct: 181 PIFAEGADVRRGMELH-GFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-D 238
Query: 591 KTIWASMLKAC 601
+W SML C
Sbjct: 239 AILWNSMLAGC 249
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 271/538 (50%), Gaps = 48/538 (8%)
Query: 169 ASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
AS NV LWNS++ F E + D Y I+ L +F
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 133
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ + ++ F + +AL+DMY N L +ARK+F++ +V WN
Sbjct: 134 AKSI--HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM------PLRDVVSWN 185
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCI------DSYTFTSALKACINLLNFNSRFALQ 342
S+ISGY N EA+ + M + D T TS L+AC +L + F
Sbjct: 186 SLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDL--EFGKY 243
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG- 401
VH ++TSGYE D + LI++YA+ GN+ ++ E+F + KD V+W+ +I ++G
Sbjct: 244 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGK 303
Query: 402 ----LNSLAYLLFRDMINSNQDVNQFIIS--------------------------SVLKV 431
L + RD+I N + + S S+L V
Sbjct: 304 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 363
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
CS LA+ R+GK++H K G E + LI+MY KCG + + +FK M +DVV+W
Sbjct: 364 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 423
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I CG G K+A+ F EM + + P+ + F+ ++ AC H+GLVEE F MK
Sbjct: 424 TALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKK 483
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
+Y +EP +EHY C+VDLL ++ D AE I MP KPD +IW ++L AC +T++
Sbjct: 484 DYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAE 543
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
++E+++ +P+D YV++SN+YA LG WD + +RK+ K G KK G SW+E+ +
Sbjct: 544 RVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQN 601
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 221/526 (42%), Gaps = 93/526 (17%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + KS+H R++ G D++ GN L+ MY F L+ A K+F+EM +++VSW
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLE-----YGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++++ Y +N N A+ +Y ++ +P+ +++L+AC GDL+ G+ +
Sbjct: 185 NSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYV 244
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
H+ + E DT N L++MY KCG+L + SG K
Sbjct: 245 HDYMITSGYECDTTASNILINMYAKCGNLLAS-------------------QEVFSGMK- 284
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
C K+ V+ S+I++Y++ G++ D L +F M RD+++W II C
Sbjct: 285 ----C------KDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS-- 332
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+CN+ + ++
Sbjct: 333 ----------EDCNL----------------------------------------GLRMI 342
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S + + G+ D T S L C L R ++HG I G E D VG+ LI++Y+
Sbjct: 343 SRMRTEGVTPDMATMLSILPVCSLLA--AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 400
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G+++++ ++F + KDVV W+ LI C +G A F +M + + +
Sbjct: 401 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 460
Query: 428 VLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-E 485
++ CS + G H E ++D+ + +D MP +
Sbjct: 461 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 520
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
D W ++ C +G + A + +I+ L P++ + ++S
Sbjct: 521 PDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPDDTGYYVLVS 564
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 43/267 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL I L+ CG ++ GK +H +I G D N L++MYA +L + ++F
Sbjct: 221 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 280
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-------------------------- 95
M K+ VSW +M+ Y N + +++++ +M
Sbjct: 281 SGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLR 340
Query: 96 ----LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ V P+ ++L CSL G+ IH I + LE D + N L++MY
Sbjct: 341 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 400
Query: 152 KCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVHAF--CVKRGFEKEDV 202
KCGSL + + + +V W +++S G K V AF G + V
Sbjct: 401 KCGSLR----NSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 456
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPE 229
++I G +++GL F+ M +
Sbjct: 457 AFVAIIFACSHSGLVEEGLNYFHRMKK 483
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ ++ L C + +QGK +H I K GL D+ GN L+ MY+ SL ++ ++F
Sbjct: 353 DMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 412
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M K++V+WT +++A A+R + M E + P+ + A++ ACS SG +
Sbjct: 413 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM-EAAGIVPDHVAFVAIIFACSHSGLV 471
Query: 122 DLGRLIHERITRE 134
+ G R+ ++
Sbjct: 472 EEGLNYFHRMKKD 484
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 233/417 (55%), Gaps = 10/417 (2%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+V+MY+ C L +AR++FD+ + ++ W ++I+G+ N + +A+ L +
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPT------KDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G + +T +S LKA + + Q+H + GY+ VGS L+D+YAR G++
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDP--GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+A F +P K V+W+ LI G + G A L M N F SSVL C
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC 300
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ + +L +GK VHA +K G + +L+DMY K G IDD +F + + DVVSW
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ GC Q+G KE + F++M++ ++PNEI+FL VL+AC H+GL++E F MK +
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-K 419
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
Y +EP + HY VDLLG+ G D AE+ I EMP +P +W ++L AC H N +L
Sbjct: 420 YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVY 479
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
AE+ P D ++LSN+YA+ G W ++KVRK K+ G +K+ SW+E+ +
Sbjct: 480 AAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIEN 536
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 42/274 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C + ++QG+ +H ++ + L + N +++MYA L+DA ++FDEM K+
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD 153
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+WT ++ ++ N RP A+ L+ ML G +PN F S++LKA LD G +H
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLG-FQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVA----- 176
+ + + + L+DMY +CG + + FD +W A G+
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272
Query: 177 -----LW--------------NSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLI 208
LW +S+LS GK VHA +K G + +L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
DMY K G IDD +F+ + + DVVSW ++ GC
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 160/405 (39%), Gaps = 109/405 (26%)
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK-LEYDTVLMNTLLDMYVKC 153
+++ GS+ P+ +YS +LK C+ G ++ GR++H + L+ VL N +++MY KC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 154 GSL--TRKLFDQYS-----NWAASAYG---------NVALWNSML--------------- 182
G L R++FD+ W A G + L+ ML
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196
Query: 183 --SG-------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
SG G Q+HAFC+K G++ ++L+DMY +CG +D F+ MP + V
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 234 SWTGIIVG--------------------CFECSCFTLSA--------------------- 252
SW +I G F+ + FT S+
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 253 --------------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
L+DMY+ + +A+++FD+ +V WN+M++G +
Sbjct: 317 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL------VKPDVVSWNTMLTGCAQHG 370
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDY 356
+E + + G+ + +F L AC + LL+ L L+ E D
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLD----EGLYYFELMKKYKVEPDV 426
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKH 400
+DL R+G + A +P + A W L+ C H
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +++QGK +H +IK GL F GN LL MYA S++DA ++FD + + ++
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW TM+T + + + ML G +EPN + VL ACS SG LD G E
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIG-IEPNEISFLCVLTACSHSGLLDEGLYYFE 415
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLSGGK-- 186
+ + K+E D T +D+ + G L R + F + +A A+W ++L +
Sbjct: 416 LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTA----AVWGALLGACRMH 471
Query: 187 ---QVHAFCVKRGFE 198
++ + +R FE
Sbjct: 472 KNMELGVYAAERAFE 486
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 472 EIDDG-LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGV 529
E++DG A F ++D++ + G G Y ++IQ L P+ + +
Sbjct: 43 EVEDGDAASFCVFQDKDLLRKSQSDGGTG---------LYALDLIQRGSLVPDYNLYSKL 93
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
L C G VE+ + + + L+ HL +V++ + GC DDA ++ EMP K
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK- 152
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLL 618
D W +++ +N + ++ Q+L
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQML 181
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 284/595 (47%), Gaps = 71/595 (11%)
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
SV P+ Y + +AC L GRLIH+R+ R + N LL MY CGS
Sbjct: 84 SVTPHS--YQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDV 141
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
+K+FD+ K V+ +I Y K GE+
Sbjct: 142 QKVFDEM--------------------------------LMKNLVSWVIVISAYAKNGEL 169
Query: 218 DDGLALFNFMPERDV----VSWTGIIVGCFECSCFTL--------------------SAL 253
+ + LF+ M + + ++ C S L +A+
Sbjct: 170 EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAI 229
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+MY C L A+ +FD + N W ++ GY ++ E A+ L + +
Sbjct: 230 CNMYVRCGWLEGAKLVFDGMDAQ------NAVTWTGLMVGYTQAKKLEVALELFARMAME 283
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ +D + F+ LK C L +++ Q+H IV G E + VG+ L+D Y + G+++
Sbjct: 284 GVELDEFVFSIVLKVCCGLEDWD--MGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIE 341
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
SA F R+ + + V+WS LI G ++ G +F + + +N FI +SV + C+
Sbjct: 342 SAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA 401
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
A+L G Q H +KRG ++++ MY KCG +D F+ + E D V+WT
Sbjct: 402 AQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTA 461
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II G +G A EA+ +F+ M ++PN +TF+ VL+AC H+GLV EA SM +Y
Sbjct: 462 IISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDY 521
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G++P ++HY CM+D +AG +A +LI MPF+PD W S+L C H + KL I
Sbjct: 522 GVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIA 581
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
AE L P D + Y++L N+Y+ G W+ VRK A ++L +K+ SWI V
Sbjct: 582 AENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL-KKEVSCSWISV 635
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 223/539 (41%), Gaps = 119/539 (22%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG+ RS+ G+ +H R+ + + N LL MY D S D K+FDEM KN+VSW
Sbjct: 97 CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSW 156
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++AY N AIRL++ M G + PN +Y ++L++C L+LG+ IH +
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASG-IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVI 215
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
R +L + + + +MYV+CG L + +FD N W ++ G
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQ------NAVTWTGLMVGYTQAKK 269
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
G+Q+H+ VK G E E T
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTP 329
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+D Y+KCG+I+ F + E + VSW+ +I G
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG------------------------- 364
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
F Q SG + E+ I + + + S G+ ++S+ +TS
Sbjct: 365 ---FSQ-------------------SGRL-----EDCIKIFTSLRSEGVVLNSFIYTSVF 397
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVG-SNLIDLYARLGNVKSALELFHRLPKK 385
+AC N N Q HG + G + Y+ G S ++ +Y++ G + A F + +
Sbjct: 398 QACAAQANLN--MGSQAHGDAIKRGL-VSYLYGESAMVTMYSKCGRLDYARRAFESIDEP 454
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV- 444
D VAW+ +I G HG + A FR M + N +VL CS + KQ
Sbjct: 455 DAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYL 514
Query: 445 ----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ VK + D +ID Y + G + + L L MP E D +SW ++ GC
Sbjct: 515 GSMSRDYGVKPTIDHYDC----MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 169/442 (38%), Gaps = 115/442 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ GK +H +I+ L+ +I + +MY L A +FD M +N
Sbjct: 195 LQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+WT ++ YT K+ A+ L+ M G VE + F++S VLK C D D+GR IH
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEG-VELDEFVFSIVLKVCCGLEDWDMGRQIHS 313
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
I + E + + L+D YVKCG + Y ++ + N W++++SG
Sbjct: 314 HIVKLGAESEVSVGTPLVDFYVKCGDIE----SAYRSFGRISEPNDVSWSALISGFSQSG 369
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G Q H +KRG +
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES 429
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+++ MY KCG +D F + E D V+WT II G
Sbjct: 430 AMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG------------------------ 465
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ +GN A EA+ + S G+ ++ TF +
Sbjct: 466 ------------YAYHGNAA----------------EALGFFRRMQSYGVRPNAVTFIAV 497
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELF 379
L AC S L DY V +ID Y+R G ++ ALEL
Sbjct: 498 LTAC-------SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELI 550
Query: 380 HRLP-KKDVVAWSGLIMGCTKH 400
+R+P + D ++W L+ GC H
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAH 572
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 12/302 (3%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVG 359
+EA L + + + + +++ +AC L + + R +H + + +
Sbjct: 69 KEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRL---IHDRLRRTVKNPSGSIE 125
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+ +Y G+ ++F + K++V+W +I K+G A LF DM S
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N + S+L+ C + L GKQ+H+ ++ T++ +MY++CG ++ +
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F M ++ V+WTG++VG Q + + A+ F M ++ +E F VL C GL
Sbjct: 246 FDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC--CGL- 302
Query: 540 EEAWTIFTSMKP---EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
E W + + + G E + +VD + G + A + + +P+ W++
Sbjct: 303 -EDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSA 360
Query: 597 ML 598
++
Sbjct: 361 LI 362
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 245/424 (57%), Gaps = 9/424 (2%)
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+C +T +AL++MYS + RK+F+ +V +N++I+GY + E+A
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPR------KDVVSYNTVIAGYAQSGMYEDA 190
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ ++ + +S + D++T +S L ++ ++HG ++ G + D +GS+L+
Sbjct: 191 LRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK--GKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+YA+ ++ + +F L ++D ++W+ L+ G ++G + A LFR M+++
Sbjct: 249 DMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAV 308
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
SSV+ C+ LA+L GKQ+H + ++ GF + ++L+DMY KCG I +F M
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRM 368
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
D VSWT II+G +G EA++ F+EM + +KPN++ F+ VL+AC H GLV+EAW
Sbjct: 369 NLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 428
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F SM YGL LEHY + DLLG+AG ++A I++M +P ++W+++L +C
Sbjct: 429 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSV 488
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMS 662
H N +L +AE++ E+ YV++ N+YA+ G W ++K+R +K G KK S
Sbjct: 489 HKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACS 548
Query: 663 WIEV 666
WIE+
Sbjct: 549 WIEM 552
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 154/285 (54%), Gaps = 8/285 (2%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
S ++ +Y+N +L EA +F S A W S+I + A+ +
Sbjct: 43 SIVISIYTNLKLLHEALLVFKTLESPPVLA------WKSVIRCFTDQSLFSRALASFVEM 96
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+SG C D F S LK+C +++ RF VHG IV G + D G+ L+++Y++L
Sbjct: 97 RASGRCPDHNVFPSVLKSCTMMMDL--RFGESVHGFIVRLGMDCDLYTGNALMNMYSKLL 154
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ S ++F +P+KDVV+++ +I G + G+ A + R+M S+ + F +SSVL
Sbjct: 155 GIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLP 214
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+ S + +GK++H + +++G + + +SL+DMY K I+D +F + RD +S
Sbjct: 215 IFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSIS 274
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
W ++ G QNGR EA+ F++M+ ++++P + F V+ AC H
Sbjct: 275 WNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAH 319
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 185/441 (41%), Gaps = 113/441 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ G+S+H I++ G+ D++TGN L++MY+ ++ K+F+ M RK++
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDV 171
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ T++ Y + A+R+ M ++P+ F S+VL S D+ G+ IH
Sbjct: 172 VSYNTVIAGYAQSGMYEDALRMVREM-GTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHG 230
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVA------ 176
+ R+ ++ D + ++L+DMY K + + ++F +W + G V
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290
Query: 177 ---LWNSMLSG------------------------GKQVHAFCVKRGFEKEDVTLTSLID 209
L+ M+S GKQ+H + ++ GF + ++L+D
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG I +F+ M D VSWT II+G
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG---------------------------- 382
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
+ L+ EA++L + G+ + F + L AC
Sbjct: 383 ------------------------HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 418
Query: 330 --INLLN-----FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ L++ FNS +V+GL EL++ + DL R G ++ A + ++
Sbjct: 419 SHVGLVDEAWGYFNS--MTKVYGL----NQELEHYAA--VADLLGRAGKLEEAYDFISKM 470
Query: 383 ---PKKDVVAWSGLIMGCTKH 400
P V WS L+ C+ H
Sbjct: 471 RVEPTGSV--WSTLLSSCSVH 489
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
A Q+H + + L + S +I +Y L + AL +F L V+AW +I T
Sbjct: 24 AKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
L S A F +M S + + + SVLK C+ + LR G+ VH F V+ G + + T
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+L++MY K ID +F+ MP +DVVS+ +I G Q+G ++A+ +EM S L
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
KP+ T VL V + I + + G++ + +VD+ ++ +D+E
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSE 261
Query: 580 QLIAEMPFKPDKTIWASML 598
++ + + ++ D W S++
Sbjct: 262 RVFSHL-YRRDSISWNSLV 279
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 187/666 (28%), Positives = 309/666 (46%), Gaps = 104/666 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ HC +S+ K +H ++IK G + F GN L +Y+ + ND+ ++F+++ KN+
Sbjct: 44 IEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNL 103
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW + A+ +R G+L+ R + +
Sbjct: 104 ISWNIFLKAF---------VRF---------------------------GELERARDVFD 127
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASA-------YGNVALWNSML 182
+ + D V NT++ YV G L F +S + Y + + S
Sbjct: 128 EMPKR----DVVSWNTMISGYVSFG-LFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 182
Query: 183 SGGKQVHAFCVKRGFEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQ+HA ++ G + +V + SLI MY K G +D +F M E D+ SW +I
Sbjct: 183 CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWS 242
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
C S Y N+AL +VL
Sbjct: 243 C----------------------------------GKSGYQNLALRQ-----FVL----- 258
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+ S G D +T ++ + C NL + Q+ L + G+ + IV S
Sbjct: 259 --------MRSVGYSPDQFTVSTVITVCSNLQDLEK--GEQIFALCIRVGFLSNSIVSSA 308
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
IDL+++ ++ ++ +F + + D V + +I HG A LF + N
Sbjct: 309 SIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPT 368
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+F +S VL S L + +G Q+H+ VK G E + I +SL++MY K G ID + F
Sbjct: 369 EFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFA 428
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ RD++SW +I+G NGR +A+ F+E++ P+EIT GVL AC GLV+E
Sbjct: 429 KIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDE 488
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+IF+SM+ EYG+ P +EHY C+VD++ + G +A ++ MP +P IW S+L AC
Sbjct: 489 GLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCAC 548
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-G 660
E + + + +AE+++ P+ Y++L+ Y G W+SL +VR+A K+ G +K G
Sbjct: 549 EIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIG 608
Query: 661 MSWIEV 666
SWI +
Sbjct: 609 CSWIGI 614
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/541 (21%), Positives = 209/541 (38%), Gaps = 158/541 (29%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS------------ 155
YS +++ C L LD + +H ++ + T L N LD+Y + G+
Sbjct: 40 YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII 99
Query: 156 ---------------------LTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
R +FD+ +V WN+M+SG
Sbjct: 100 DKNLISWNIFLKAFVRFGELERARDVFDEMPK------RDVVSWNTMISGYVSFGLFDDA 153
Query: 185 -------------------------------GKQVHAFCVKRGFEKEDVTL-TSLIDMYL 212
GKQ+HA ++ G + +V + SLI MY
Sbjct: 154 FRFFSEMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYG 213
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGC--------------------FECSCFTLS- 251
K G +D +F M E D+ SW +I C + FT+S
Sbjct: 214 KFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVST 273
Query: 252 ----------------------------------ALVDMYSNCNVLCEARKLFDQYSSWA 277
A +D++S CN L ++ ++F++ W
Sbjct: 274 VITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQW- 332
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ L N+MIS Y + E A+ L + +T + L A LL +
Sbjct: 333 -----DSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQ 387
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
Q+H L+V SG E D IV S+L+++YA+ G + SA++ F ++ +D+++W+ +IMG
Sbjct: 388 --GSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGL 445
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+G S A +F++++ ++ ++ VL C+ + G + + EKE
Sbjct: 446 AYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFS-----SMEKEY 500
Query: 458 ITLTS------LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG--RAKEAI 508
+ + ++DM + G++ + + + + MP E + W ++ C G R E +
Sbjct: 501 GVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERV 560
Query: 509 A 509
A
Sbjct: 561 A 561
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEK-------------------------EDITL 460
S++++ C L SL K VHA +K GF EDI
Sbjct: 41 SNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIID 100
Query: 461 TSLI--DMYLKC----GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+LI +++LK GE++ +F MP+RDVVSW +I G G +A +F EM
Sbjct: 101 KNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEM 160
Query: 515 IQSRLKPNEITFLGVL----SACR----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
++ ++P+ T+ +L SACR HA ++ + + ++
Sbjct: 161 QKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGN-----------SLI 209
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC--ETHNNTKLVSIIAEQLLATSPE 623
+ G+ G D A + M + D T W S++ +C + N L + + + SP+
Sbjct: 210 GMYGKFGVVDYAFGVFITME-ELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPD 267
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 203/703 (28%), Positives = 337/703 (47%), Gaps = 87/703 (12%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLF--DEMARKNIVS 71
+++ + K LHC ++K G +F N L++ SLN A F DE + ++ +
Sbjct: 33 KTLIELKQLHCNMLKKG----VFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYT 88
Query: 72 WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERI 131
T++ Y ++ AI +Y HM+ + P+ F + +L ACS G +H +
Sbjct: 89 CNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVV 148
Query: 132 TREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
+ L D + N+L+ Y CG L RK+FD+ NV W S+++G V+
Sbjct: 149 VKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLER------NVVSWTSLINGYSVVN 202
Query: 190 ----AFC-----VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
A C V+ G E VT+ I K +++ G + N M E V S T ++
Sbjct: 203 MAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVV- 261
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+AL+DMY C + R++FD++S N+ ++N+++S YV +
Sbjct: 262 ----------NALLDMYMKCGDMYAVREIFDEFSD------KNLVMYNTIMSNYVQHGLA 305
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
E + +L + G D T S + AC L + + H + +G E + +
Sbjct: 306 GEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLS--VGKSSHAYVFRNGLERLDNISN 363
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN--- 417
+ID+Y + G ++A ++F + K VV W+ LI G + G LA +F +M SN
Sbjct: 364 AIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVS 423
Query: 418 ----------------------QDVNQFI------ISSVLKVCSCLASLRRGKQVHAFCV 449
+ NQ I + + C L +L K ++ +
Sbjct: 424 WNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTY-- 481
Query: 450 KRGFEKEDITL-----TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRA 504
EK DI + T+L+DM+ +CG+ + + +F+ M +RDV +WT I G A
Sbjct: 482 ---IEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNA 538
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
K AI F EM++ +K ++ F+ +L+A H G V++ +F +M+ +G+ P + HY C
Sbjct: 539 KGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGC 598
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
MVDLLG+AG ++A L+ MP KP+ IW S L AC H N + + E++ +PE
Sbjct: 599 MVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEK 658
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+V+LSN+YA+ G W+ +++VR K+ G +K AG S IEV
Sbjct: 659 VGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEV 701
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 260/565 (46%), Gaps = 70/565 (12%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + +G +H ++K GL +D+F N+L+ YA ++ K+FDEM +N+
Sbjct: 129 LSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNV 188
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+++ Y+ A+ L+ M+E G VEPN + AC+ DL+LG+ +
Sbjct: 189 VSWTSLINGYSVVNMAKEAVCLFFEMVEVG-VEPNPVTMVCAISACAKLKDLELGKKVCN 247
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNV------------ 175
+T ++ +T+++N LLDMY+KCG + R++FD++S+ Y +
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307
Query: 176 --ALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
+ + M LS GK HA+ + G E+ D ++ID
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIID 367
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY+KCG+ + +F+ M + VV+W +I G L A ++
Sbjct: 368 MYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELEL---------------ALRI 412
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F + N+ WN+MI V EEAI LL + + G+ D T AC
Sbjct: 413 FGEMPE------SNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 466
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L + A ++ I + +D +G+ L+D+++R G+ +A+ +F + K+DV A
Sbjct: 467 GYLGALD--LAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSA 524
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH-AFC 448
W+ I G A LF +M+ + + F+ ++L S + +G+Q+ A
Sbjct: 525 WTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAME 584
Query: 449 VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER--DVVSWTGIIVGCGQNGRAKE 506
G + + ++D+ + G +++ L K MP + DV+ W + C ++ + E
Sbjct: 585 KIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVI-WGSFLAACRKH-KNVE 642
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLS 531
Y E I ++L P ++ +LS
Sbjct: 643 FANYADEKI-TQLAPEKVGIHVLLS 666
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 127/338 (37%), Gaps = 72/338 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ + C Q + GKS H + + GL + N ++ MY A K+F
Sbjct: 323 DKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVF 382
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN---GFMYSA-------- 110
D M+ K +V+W +++ + A+R++ M E V N G M A
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 442
Query: 111 -------------------VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ AC G LDL + I+ I + + D L L+DM+
Sbjct: 443 LLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFS 502
Query: 152 KCGSL--TRKLFDQ-----YSNWAAS---------AYGNVALWNSMLSGGKQVHAFCVKR 195
+CG ++F+ S W A+ A G + L++ ML K+
Sbjct: 503 RCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEML-----------KQ 551
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
+ +D +L+ + G +D G LF M + VS + GC +VD
Sbjct: 552 DVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGC----------MVD 601
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ +L EA FD S N +W S ++
Sbjct: 602 LLGRAGLLEEA---FDLMKSMPIKP--NDVIWGSFLAA 634
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 201/657 (30%), Positives = 320/657 (48%), Gaps = 49/657 (7%)
Query: 29 IIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWA 88
II + D F L++ Y+ L +A K+FDE+ + V MV Y N+R N
Sbjct: 80 IITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDC 139
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
I L M+ +E + + + LKAC D ++G + + L L +++L+
Sbjct: 140 IELLK-MMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN 198
Query: 149 MYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF--------- 197
VK G + + F Q +V WN M+ G Q F + G+
Sbjct: 199 FLVKTGDIMCAQFFFHQM------VEKDVVCWNVMIGGFMQEGLF--REGYNLFLDMLYN 250
Query: 198 --EKEDVTLTSLIDMYLKCGEIDD---GLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
E VT+ SLI CGE+ + G + F+ + T + L+
Sbjct: 251 KIEPSAVTMISLIQ---SCGEMRNLTFGKCMHGFVLGFGMSRDTRV-----------LTT 296
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+DMY + AR +F+ S N+ WN MISGYV N E + L +
Sbjct: 297 LIDMYCKSGDVESARWIFENMPSR------NLVSWNVMISGYVQNGLLVETLRLFQKLIM 350
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ DS T S ++ C + + L HG I G +L+ ++ + ++DLYA+ G++
Sbjct: 351 DDVGFDSGTVVSLIQLCSRTADLDGGKIL--HGFIYRRGLDLNLVLPTAIVDLYAKCGSL 408
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F R+ K+V++W+ +++G ++G A LF M N N + S++ C
Sbjct: 409 AYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCC 468
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF-MPERDVVSW 491
+ L LR G+ VHA + F E + +T+LIDMY KC +I+ +FK+ + +DV+ +
Sbjct: 469 TLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILY 528
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
+I G G +G +A+ + M + L+PNE TF+ +LSAC H+GLVEE +F +M
Sbjct: 529 NSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVK 588
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
++ P + Y C+VDLL +AG AE+LI +MPF P I ++L C H + +L
Sbjct: 589 DHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGV 648
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+A++LL+ +PS Y+ LSN+YA WDS+ VR + KK G S IEV+
Sbjct: 649 KLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEVN 705
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 42/277 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ ++ CG+ R++ GK +H ++ +G+S+D L+ MY + A +F+ M
Sbjct: 259 MISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMP 318
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSW M++ Y N +RL+ ++ +G + S +++ CS + DLD G+
Sbjct: 319 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVS-LIQLCSRTADLDGGK 377
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--------------------------- 158
++H I R L+ + VL ++D+Y KCGSL
Sbjct: 378 ILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNG 437
Query: 159 ------KLFDQYSNWAAS--AYGNVALWN-----SMLSGGKQVHAFCVKRGFEKEDVTLT 205
KLFDQ N + A V+L +L G+ VHA + F E V +T
Sbjct: 438 HARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMT 497
Query: 206 SLIDMYLKCGEIDDGLALFNF-MPERDVVSWTGIIVG 241
+LIDMY KC +I+ +F + + +DV+ + +I G
Sbjct: 498 ALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISG 534
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V ++ C + + GK LH I + GL ++ ++ +YA SL A +F
Sbjct: 356 DSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVF 415
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M KN++SWT M+ N A++L++ M + V N +++ C+L G L
Sbjct: 416 ERMKNKNVISWTAMLVGLAQNGHARDALKLFDQM-QNERVTFNALTLVSLVYCCTLLGLL 474
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG----NVAL 177
GR +H +TR + V+M L+DMY KC + S YG +V L
Sbjct: 475 REGRSVHATLTRFHFASEVVVMTALIDMYAKCSKIN-------SAEMVFKYGLTPKDVIL 527
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
+NSM+SG G A CV + G + + T SL+ G +++G+ALF M
Sbjct: 528 YNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMV 587
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ + T + C +VD+ S L +A +L +Q S +
Sbjct: 588 KDHNTTPTDKLYAC----------IVDLLSRAGRLRQAEELINQMPFTPTS-----GILE 632
Query: 289 SMISGYVLNEQNEEAITLLSHIHS 312
++++G +L++ E + L + S
Sbjct: 633 TLLNGCLLHKDIELGVKLADRLLS 656
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%)
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSL 405
+I+T+ D + + L+ Y+ LG +++A ++F +P+ V + ++ G ++ +
Sbjct: 79 IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYND 138
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
L + M + + + + + LK C L G +V V +G +S+++
Sbjct: 139 CIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN 198
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+K G+I F M E+DVV W +I G Q G +E F +M+ ++++P+ +T
Sbjct: 199 FLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVT 258
Query: 526 FLGVLSAC 533
+ ++ +C
Sbjct: 259 MISLIQSC 266
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 308/664 (46%), Gaps = 93/664 (14%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
Q + +++K G+ Q ++ L+ Y A +LF+++ ++VSW ++ Y+
Sbjct: 61 QVNQIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYS 120
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
+ P+ A++L+ HML S PN +++L +C GR +H + L D
Sbjct: 121 QHGHPHDALQLFVHMLRE-SFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDP 179
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYS-------NWAASAYGN-------VALWNSMLSG 184
L N L MY KC L ++ LF + N AYG V + ML
Sbjct: 180 QLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKE 239
Query: 185 GKQ------------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
G Q VH + +K GF + +TSL+ +Y K G D L+
Sbjct: 240 GWQPSPVTMMNLMSANAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYEC 299
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
P +D++S TGII S ++ V+ C + + KL
Sbjct: 300 YPTKDLISLTGII------SSYSEKGEVESAVECFI--QTLKL----------------- 334
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--QVH 344
+ +A+ L+S +H ++ S FA+ H
Sbjct: 335 -----------DIKPDAVALISVLHG--------------------ISDPSHFAIGCAFH 363
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
G + +G D +V + LI Y+R + +AL LF +K ++ W+ +I GC + G +S
Sbjct: 364 GYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSS 423
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
A LF M Q + I+S+L C L LR G+ +H + ++ + ED T T+LI
Sbjct: 424 DAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALI 483
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY KCG +D +F + + +V+W II G G +A F ++ + L+P++I
Sbjct: 484 DMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKI 543
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
TFLGVL+AC H GLV F M+ EYGL P L+HY C+V LLG+AG F +A ++I
Sbjct: 544 TFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINN 603
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
M +PD +W ++L AC KL +A+ L + ++ YV LSN+YA +G WD +
Sbjct: 604 MEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDV 663
Query: 645 SKVR 648
++VR
Sbjct: 664 ARVR 667
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 128/563 (22%), Positives = 213/563 (37%), Gaps = 124/563 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG+R QG+S+H IK GL D N L SMYA L + LF EM
Sbjct: 147 IASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMG 206
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA----------- 114
KN++SW TM+ AY N + A+ + ML+ G +P+ ++ A
Sbjct: 207 EKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEG-WQPSPVTMMNLMSANAVPETVHCYI 265
Query: 115 --CSLSGD----------------LDLGRLIHERITREKLEYDTVLMNTL-----LDMYV 151
C +GD D+ +L++E + L T ++++ ++ V
Sbjct: 266 IKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAV 325
Query: 152 KCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
+C T KL + A + + S + G H + +K G + + LI Y
Sbjct: 326 ECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFY 385
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+ EI L+LF E+ +++W +I GC +
Sbjct: 386 SRFDEILAALSLFFDRSEKPLITWNSMISGCVQAG------------------------- 420
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
++ +A+ L ++ G D+ T S L C
Sbjct: 421 ---------------------------KSSDAMELFCQMNMCGQKPDAITIASLLSGCCQ 453
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L R +HG I+ + +++ G+ LID+Y + G + A ++F+ + +V W+
Sbjct: 454 LGYL--RIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWN 511
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G + +GL A+ F + + ++ VL C+ H V
Sbjct: 512 SIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACT-----------HGGLVYA 560
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG-CGQNGRAKEAIAY 510
G E Y + + GL MP + IVG G+ G KEAI
Sbjct: 561 GME------------YFRIMRKEYGL-----MP---TLQHYACIVGLLGRAGLFKEAIEI 600
Query: 511 FQEMIQSRLKPNEITFLGVLSAC 533
M ++P+ + +LSAC
Sbjct: 601 INNM---EIRPDSAVWGALLSAC 620
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVC---------SCLASLRRGKQVHAFCVKRGFE 454
S A L+FR ++ S+ + N S ++K C + + Q+ +KRG +
Sbjct: 16 SSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGID 75
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ T+LID Y+K G LF+ +P DVVSW +I G Q+G +A+ F M
Sbjct: 76 QFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHM 135
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAG 573
++ +PN+ T +L +C L + ++ +K GL+P L + + A
Sbjct: 136 LRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSM----YAK 191
Query: 574 CFD-DAEQLIAEMPFKPDKTIWASMLKA 600
C D +A QL+ + + + W +M+ A
Sbjct: 192 CDDLEASQLLFQEMGEKNVISWNTMIGA 219
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L C Q ++ G++LH I++ + + FTG L+ MY L+ A K+F
Sbjct: 440 DAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIF 499
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ +V+W ++++ Y+ + A ++ + E G +EP+ + VL AC+ G L
Sbjct: 500 YSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQG-LEPDKITFLGVLAACT-HGGL 557
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+ + RI R+ EY LM TL G L R
Sbjct: 558 VYAGMEYFRIMRK--EYG--LMPTLQHYACIVGLLGR 590
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 284/595 (47%), Gaps = 71/595 (11%)
Query: 100 SVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
SV P+ Y + +AC L GRLIH+R+ R + N LL MY CGS
Sbjct: 84 SVTPHS--YQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDV 141
Query: 158 RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
+K+FD+ K V+ +I Y K GE+
Sbjct: 142 QKVFDEM--------------------------------LMKNLVSWVIVISAYAKNGEL 169
Query: 218 DDGLALFNFMPERDV----VSWTGIIVGCFECSCFTL--------------------SAL 253
+ + LF+ M + + ++ C S L +A+
Sbjct: 170 EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAI 229
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+MY C L A+ +FD + N W ++ GY ++ E A+ L + +
Sbjct: 230 CNMYVRCGWLEGAKLVFDGMDA------QNAVTWTGLMVGYTQAKKLEVALELFARMAME 283
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ +D + F+ LK C L +++ Q+H IV G E + VG+ L+D Y + G+++
Sbjct: 284 GVELDEFVFSIVLKVCCXLEDWD--MGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIE 341
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
SA F R+ + + V+WS LI G ++ G +F + + +N FI +SV + C+
Sbjct: 342 SAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA 401
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
A+L G Q H +KRG ++++ MY KCG +D F+ + E D V+WT
Sbjct: 402 AQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTA 461
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
II G +G A EA+ +F+ M ++PN +TF+ VL+AC H+GLV EA SM +Y
Sbjct: 462 IISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDY 521
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G++P ++HY CM+D +AG +A +LI MPF+PD W S+L C H + KL I
Sbjct: 522 GVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIA 581
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
AE L P D + Y++L N+Y+ G W+ VRK A ++L +K+ SWI V
Sbjct: 582 AENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL-KKEVSCSWISV 635
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 223/539 (41%), Gaps = 119/539 (22%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
CG+ RS+ G+ +H R+ + + N LL MY D S D K+FDEM KN+VSW
Sbjct: 97 CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSW 156
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++AY N AIRL++ M G + PN +Y ++L++C L+LG+ +H +
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASG-IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVI 215
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
R +L + + + +MYV+CG L + +FD N W ++ G
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA------QNAVTWTGLMVGYTQAKK 269
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GKQ+H+ VK G E E T
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTP 329
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
L+D Y+KCG+I+ F + E + VSW+ +I G
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG------------------------- 364
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
F Q SG + E+ I + + + S G+ ++S+ +TS
Sbjct: 365 ---FSQ-------------------SGRL-----EDCIKIFTSLRSEGVVLNSFIYTSVF 397
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVG-SNLIDLYARLGNVKSALELFHRLPKK 385
+AC N N Q HG + G + Y+ G S ++ +Y++ G + A F + +
Sbjct: 398 QACAAQANLN--MGSQAHGDAIKRGL-VSYLYGESAMVTMYSKCGRLDYARRAFESIDEP 454
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV- 444
D VAW+ +I G HG + A FR M + N +VL CS + KQ
Sbjct: 455 DAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYL 514
Query: 445 ----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ VK + D +ID Y + G + + L L MP E D +SW ++ GC
Sbjct: 515 GSMSRDYGVKPTIDHYDC----MIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 168/442 (38%), Gaps = 115/442 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C ++ GK +H +I+ L+ +I + +MY L A +FD M +N
Sbjct: 195 LQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+WT ++ YT K+ A+ L+ M G VE + F++S VLK C D D+G+ IH
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEG-VELDEFVFSIVLKVCCXLEDWDMGKQIHS 313
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
I + E + + L+D YVKCG + Y ++ + N W++++SG
Sbjct: 314 HIVKLGXESEVSVGTPLVDFYVKCGDIE----SAYRSFGRISEPNDVSWSALISGFSQSG 369
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G Q H +KRG +
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES 429
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+++ MY KCG +D F + E D V+WT II G
Sbjct: 430 AMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG------------------------ 465
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ +GN A EA+ + S G+ ++ TF +
Sbjct: 466 ------------YAYHGNAA----------------EALGFFRRMQSYGVRPNAVTFIAV 497
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELF 379
L AC S L DY V +ID Y+R G + ALEL
Sbjct: 498 LTAC-------SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELI 550
Query: 380 HRLP-KKDVVAWSGLIMGCTKH 400
+R+P + D ++W L+ GC H
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAH 572
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 134/302 (44%), Gaps = 12/302 (3%)
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVG 359
+EA L + + + + +++ +AC L + + R +H + + +
Sbjct: 69 KEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRL---IHDRLRRTVKNPSGSIE 125
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+ +Y G+ ++F + K++V+W +I K+G A LF DM S
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N + S+L+ C + L GKQ+H+ ++ T++ +MY++CG ++ +
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F M ++ V+WTG++VG Q + + A+ F M ++ +E F VL C
Sbjct: 246 FDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC----CX 301
Query: 540 EEAWTIFTSMKP---EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
E W + + + G E + +VD + G + A + + +P+ W++
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSA 360
Query: 597 ML 598
++
Sbjct: 361 LI 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
++ +K G A+ ++M +++ V + + C L SL G+ +H ++R
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR-LRRTV 117
Query: 454 EKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ ++ + L+ MY CG D +F M +++VSW +I +NG ++AI F
Sbjct: 118 KNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFS 177
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVE 540
+M S ++PN ++ +L +C +E
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLE 205
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 294/577 (50%), Gaps = 45/577 (7%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN 166
S LK + G L G+ +H + + L N +L +YVKC K+FD+
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEM-- 134
Query: 167 WAASAYGNVALWNSMLSGGKQVHAFC----VKRGFE-----------KEDVTLTSLIDMY 211
NV WN+++ G V C V+ GF +TL L+
Sbjct: 135 ----PLKNVVSWNTLICG--VVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRAS 188
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
++ ++ L F I+ F+ +CF SALVD Y+ ++ EA+ FD
Sbjct: 189 IELNDVGICRQLHCF-----------ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD 237
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ SS ++ LWN M+S Y LN +A + + G+ D++TFTS + +C
Sbjct: 238 EVSSR------DLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGV 291
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L + QVHGLI+ ++LD +V S L+D+Y++ N++ A + F + K++V+W+
Sbjct: 292 L--GSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWT 349
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I+G +HG A L ++MI ++ ++S+L C L++ QVHA+ V+
Sbjct: 350 TMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVEN 409
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
GFE +L+ Y KCG I F + E D++SWT ++ +G +KE + F
Sbjct: 410 GFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVF 469
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
++M+ S ++P+++ FLGVLSAC H G V E F M Y + P EHY C++DLLG+
Sbjct: 470 EKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGR 529
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG D+A L+ MP +P + L AC+ H N L +E+L P +P+ Y ++
Sbjct: 530 AGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLM 589
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGE-KKAGMSWIEVS 667
SN+YA++G W +++VRK ++ + K G SW+E++
Sbjct: 590 SNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIA 626
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 141/626 (22%), Positives = 239/626 (38%), Gaps = 150/626 (23%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
AL+ + + GK LH +IK G + N +L +Y ND K+FDEM K
Sbjct: 78 HALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLK 137
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE---PNGFMYSAVLKACSLSGDLDLG 124
N+VSW T++ +RL H +E PN + +L+A D+ +
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
R +H I + + + + + L+D Y K G + + FD+ S+ ++ LWN M+
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSR------DLVLWNVMV 251
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
S GKQVH ++ F+
Sbjct: 252 SCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFD 311
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
+ + ++L+DMY K I+D F+ M +++VSWT +IVG
Sbjct: 312 LDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVG----------------- 354
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
YG + +EA+ LL + D
Sbjct: 355 ----------------------YGQ-------------HGDGKEAMRLLQEMIRVYTYPD 379
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
S L +C NL + +QVH +V +G+E + + L+ Y++ G++ SA +
Sbjct: 380 ELALASILSSCGNLSATSE--VVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F + + D+++W+ L+ HGL+ +F M+ SN ++ VL C+
Sbjct: 438 FSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACA----- 492
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
GF E + +L+ + +++ MP+ + +T II
Sbjct: 493 -----------HGGFVLEGLHYFNLM------------INVYQIMPDSE--HYTCIIDLL 527
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAWTIFTSMKPEYGL 555
G+ G EAI M ++P T L AC R+ GL A M+P
Sbjct: 528 GRAGFLDEAINLLTSM---PVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPN--- 581
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQL 581
EP +Y M ++ G + D ++
Sbjct: 582 EP--ANYSLMSNMYASVGHWFDVARV 605
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 235/426 (55%), Gaps = 10/426 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F+ F ++L+ YSNC + ++FD + +V W +MI G+V N+ + E
Sbjct: 134 FDSDLFVRNSLISGYSNCGLFEFGSRVFD------GTEDKDVVSWTAMIDGFVRNDSSLE 187
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSN 361
A+T + SG+ + T S LKA + RF +HG + +G D +GS+
Sbjct: 188 AMTYFVEMKRSGVAANEMTVVSVLKATRKAEDV--RFGRSIHGFYLEAGRVRCDVFIGSS 245
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+Y + G A ++F +P ++VV W+ LI G + +F +M+ S+ N
Sbjct: 246 LVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPN 305
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ +SSVL C+ + +L RG++VH + +K E T+LID Y KCG +++ + +F+
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFE 365
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ E++V +WT +I G +G A A+ F M+ S + PNE+TF+ VLSAC H GLVEE
Sbjct: 366 RLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEE 425
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+F SMK + LEP +HY CMVDL G+ G ++A+ LI MP +P +W ++ +C
Sbjct: 426 GRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSC 485
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAG 660
H + +L A +++ P +Y +L+N+Y+ WD +++VRK K + K G
Sbjct: 486 LIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPG 545
Query: 661 MSWIEV 666
SWIEV
Sbjct: 546 CSWIEV 551
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 216/494 (43%), Gaps = 45/494 (9%)
Query: 23 KSLHCRIIK---YGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
K +HC ++ + +D+F + LL T A +L ++ +I W ++V +
Sbjct: 19 KQIHCLVLTSPIFYTRRDLFL-SRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHF 77
Query: 80 TSNKRPNWAIRL--YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ N + Y M G V P+ + +LKA D + + H I + +
Sbjct: 78 SGRVTLNRRLSFLSYRQMRRNGVV-PSRHTFPPLLKAVFKLRDANPFQF-HAHILKFGFD 135
Query: 138 YDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVH 189
D + N+L+ Y CG ++FD + +V W +M+ G +
Sbjct: 136 SDLFVRNSLISGYSNCGLFEFGSRVFDGTED------KDVVSWTAMIDGFVRNDSSLEAM 189
Query: 190 AFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
+ V + G ++T+ S++ K ++ G ++ F E G C
Sbjct: 190 TYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLE----------AGRVRCD 239
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F S+LVDMY C +A+K+FD+ S NV W ++I+GYV E+ + +
Sbjct: 240 VFIGSSLVDMYGKCGCYDDAQKVFDEMPS------RNVVTWTALIAGYVQGRCFEKGMFV 293
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ S + + T +S L AC ++ + +VH ++ + E++ VG+ LID Y
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHR--GRRVHCYVIKNSIEINTTVGTTLIDFY 351
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A+ G ++ A+ +F RL +K+V W+ +I G HG A LF M++S+ N+
Sbjct: 352 AKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFI 411
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP- 484
VL C+ + G+++ +R E + ++D++ + G +++ AL + MP
Sbjct: 412 VVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPM 471
Query: 485 ERDVVSWTGIIVGC 498
E W + C
Sbjct: 472 EPTNAVWGALFGSC 485
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 167/427 (39%), Gaps = 114/427 (26%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H I+K+G D+F N+L+S Y++ ++FD K++VSWT M+ + N
Sbjct: 125 FHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDS 184
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE-RITREKLEYDTVLM 143
A+ + M G V N +VLKA + D+ GR IH + ++ D +
Sbjct: 185 SLEAMTYFVEMKRSG-VAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIG 243
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----------------- 184
++L+DMY KCG +K+FD+ + NV W ++++G
Sbjct: 244 SSLVDMYGKCGCYDDAQKVFDEMPS------RNVVTWTALIAGYVQGRCFEKGMFVFEEM 297
Query: 185 ---------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
G++VH + +K E T+LID Y KCG +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCL 357
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
++ + +F + E++V +WT +I G +A
Sbjct: 358 EEAILVFERLREKNVYTWTAMING----------------------------------FA 383
Query: 278 ASAY--GNVALWNSMISGYVLNEQNEEA-ITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
A Y G V L+++M+S +V NE I +LS G+ + ++K NL
Sbjct: 384 AHGYAIGAVDLFHTMLSSHV--SPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEP 441
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGL 393
+A ++DL+ R G ++ A L R+P + A W L
Sbjct: 442 KADHYAC--------------------MVDLFGRKGLLEEAKALIERMPMEPTNAVWGAL 481
Query: 394 IMGCTKH 400
C H
Sbjct: 482 FGSCLIH 488
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 342 QVHGLIVTSG--YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT- 398
Q+H L++TS Y + S L+ + A L ++ + W L+ +
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSG 79
Query: 399 KHGLNS-LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK--QVHAFCVKRGFEK 455
+ LN L++L +R M + ++ +LK + LR Q HA +K GF+
Sbjct: 80 RVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKA---VFKLRDANPFQFHAHILKFGFDS 136
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+ SLI Y CG + G +F ++DVVSWT +I G +N + EA+ YF EM
Sbjct: 137 DLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMK 196
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC-------MVDL 568
+S + NE+T + VL A R A V +I +G C +VD+
Sbjct: 197 RSGVAANEMTVVSVLKATRKAEDVRFGRSI-------HGFYLEAGRVRCDVFIGSSLVDM 249
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
G+ GC+DDA+++ EMP + + W +++
Sbjct: 250 YGKCGCYDDAQKVFDEMPSR-NVVTWTALI 278
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ +G+ +HC +IK + + G L+ YA L +A +F+ + KN+
Sbjct: 313 LSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNV 372
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+WT M+ + ++ A+ L++ ML V PN + VL AC+ G ++ GR
Sbjct: 373 YTWTAMINGFAAHGYAIGAVDLFHTMLS-SHVSPNEVTFIVVLSACAHGGLVEEGR 427
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 234/418 (55%), Gaps = 9/418 (2%)
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
L+ L++ YS C + AR++FD ++ WN+MI Y N EA+ +
Sbjct: 91 LNVLINAYSKCGFVELARQVFD------GMLERSLVSWNTMIGLYTRNRMESEALDIFLE 144
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + G +T +S L AC +N ++ ++H L V + +L+ VG+ L+DLYA+
Sbjct: 145 MRNEGFKFSEFTISSVLSACG--VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 202
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G +K A+++F + K V WS ++ G ++ A LL+R + + NQF +SSV+
Sbjct: 203 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 262
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
CS LA+L GKQ+HA K GF +S +DMY KCG + + +F + E+++
Sbjct: 263 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 322
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
W II G ++ R KE + F++M Q + PNE+TF +LS C H GLVEE F M
Sbjct: 323 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 382
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ YGL P++ HY CMVD+LG+AG +A +LI +PF P +IW S+L +C + N +L
Sbjct: 383 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 442
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
+ AE+L PE+ +V+LSN+YA W+ ++K RK + KK G SWI++
Sbjct: 443 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 500
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 182/419 (43%), Gaps = 48/419 (11%)
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--S 155
Y + N + +L+ C+ +G + + H +I R LE D L+N L++ Y KCG
Sbjct: 46 YSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 105
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
L R++FD ++ WN+M+ G + + +D++L+
Sbjct: 106 LARQVFD------GMLERSLVSWNTMI-------------GLYTRNRMESEALDIFLEMR 146
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECS---CFTLSALVDM-----------YSNCN 261
++G F V+S G+ EC C ++ +D+ Y+ C
Sbjct: 147 --NEGFKFSEFTIS-SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 203
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
++ +A ++F+ ++ W+SM++GYV N+ EEA+ L + + +T
Sbjct: 204 MIKDAVQVFESMQDKSS------VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 257
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+S + AC NL Q+H +I SG+ + V S+ +D+YA+ G+++ + +F
Sbjct: 258 LSSVICACSNLAALIE--GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 315
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +K++ W+ +I G KH +LF M N+ SS+L VC + G
Sbjct: 316 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 375
Query: 442 KQVHAFC-VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGC 498
++ G + + ++D+ + G + + L K +P S W ++ C
Sbjct: 376 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 434
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG I+ E D + + LI+ Y++ G V+ A ++F + ++ +V+W+ +I T++ +
Sbjct: 76 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
S A +F +M N ++F ISSVL C K++H VK + T+L
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 195
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+D+Y KCG I D + +F+ M ++ V+W+ ++ G QN +EA+ ++ + L+ N+
Sbjct: 196 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 255
Query: 524 ITFLGVLSACRH-AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
T V+ AC + A L+E K +G + VD+ + G ++ +
Sbjct: 256 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS--SAVDMYAKCGSLRESYIIF 313
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+E+ K + +W +++ H K V I+ E++
Sbjct: 314 SEVQEK-NLELWNTIISGFAKHARPKEVMILFEKM 347
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG + K LHC +K + +++ G LL +YA + DA ++F+ M
Sbjct: 157 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 216
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W++MV Y NK A+ LY + S+E N F S+V+ ACS L G+
Sbjct: 217 DKSSVTWSSMVAGYVQNKNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGK 275
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H I + + + ++ +DMY KCGSL + Y ++ N+ LWN+++SG
Sbjct: 276 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLR----ESYIIFSEVQEKNLELWNTIISGF 331
Query: 185 GKQVHAFCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
K V FEK +VT +SL+ + G +++G F M +
Sbjct: 332 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR-----TTY 386
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKL-----FDQYSS-WAA-----SAYGNVA 285
G+ SC +VD+ +L EA +L FD +S W + Y N+
Sbjct: 387 GLSPNVVHYSC-----MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 441
Query: 286 LWNSMISG-YVLNEQNEEAITLLSHIHSS 313
L + L +N LLS+I+++
Sbjct: 442 LAEVAAEKLFELEPENAGNHVLLSNIYAA 470
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 167/437 (38%), Gaps = 107/437 (24%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E L+ C + ++ + K+ H +II+ L D+ N L++ Y+ + A ++FD M +
Sbjct: 58 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 117
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++VSW TM+ YT N+ + A+ ++ M G + + F S+VL AC ++ D + +
Sbjct: 118 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACGVNCDALECKKL 176
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H + ++ + + LLD+Y KCG + D + + + W+SM++G
Sbjct: 177 HCLSVKTCIDLNLYVGTALLDLYAKCGMIK----DAVQVFESMQDKSSVTWSSMVAGYVQ 232
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQ+HA K GF
Sbjct: 233 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 292
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+S +DMY KCG + + +F+ + E+++ W II G
Sbjct: 293 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG---------------------- 330
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ + + +E + L + GM + TF+
Sbjct: 331 ------------------------------FAKHARPKEVMILFEKMQQDGMHPNEVTFS 360
Query: 324 SALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L C L+ RF + T G + + S ++D+ R G + A EL
Sbjct: 361 SLLSVCGHTGLVEEGRRF---FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 417
Query: 382 LPKKDVVA-WSGLIMGC 397
+P + W L+ C
Sbjct: 418 IPFDPTASIWGSLLASC 434
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
SN+ N+ ++ +L++C+ ++ K H ++ E + L LI+ Y KCG ++
Sbjct: 47 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 106
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M ER +VSW +I +N EA+ F EM K +E T VLSAC
Sbjct: 107 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-- 164
Query: 536 AGLVEEAWTI--FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
G+ +A + + ++ +L ++DL + G DA Q+ M K T
Sbjct: 165 -GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT- 222
Query: 594 WASML 598
W+SM+
Sbjct: 223 WSSMV 227
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 234/418 (55%), Gaps = 9/418 (2%)
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
L+ L++ YS C + AR++FD ++ WN+MI Y N EA+ +
Sbjct: 99 LNVLINAYSKCGFVELARQVFD------GMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + G +T +S L AC +N ++ ++H L V + +L+ VG+ L+DLYA+
Sbjct: 153 MRNEGFKFSEFTISSVLSAC--GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G +K A+++F + K V WS ++ G ++ A LL+R + + NQF +SSV+
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
CS LA+L GKQ+HA K GF +S +DMY KCG + + +F + E+++
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
W II G ++ R KE + F++M Q + PNE+TF +LS C H GLVEE F M
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ YGL P++ HY CMVD+LG+AG +A +LI +PF P +IW S+L +C + N +L
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
+ AE+L PE+ +V+LSN+YA W+ ++K RK + KK G SWI++
Sbjct: 451 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG I+ E D + + LI+ Y++ G V+ A ++F + ++ +V+W+ +I T++ +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
S A +F +M N ++F ISSVL C K++H VK + T+L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+D+Y KCG I D + +F+ M ++ V+W+ ++ G QN +EA+ ++ + L+ N+
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 524 ITFLGVLSACRH-AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
T V+ AC + A L+E K +G + VD+ + G ++ +
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS--SAVDMYAKCGSLRESYIIF 321
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+E+ K + +W +++ H K V I+ E++
Sbjct: 322 SEVQEK-NLELWNTIISGFAKHARPKEVMILFEKM 355
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG + K LHC +K + +++ G LL +YA + DA ++F+ M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W++MV Y NK A+ LY + S+E N F S+V+ ACS L G+
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H I + + + ++ +DMY KCGSL + Y ++ N+ LWN+++SG
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLR----ESYIIFSEVQEKNLELWNTIISGF 339
Query: 185 GKQVHAFCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
K V FEK +VT +SL+ + G +++G F M +
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR-----TTY 394
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKL-----FDQYSS-WAA-----SAYGNVA 285
G+ SC +VD+ +L EA +L FD +S W + Y N+
Sbjct: 395 GLSPNVVHYSC-----MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 286 LWNSMISG-YVLNEQNEEAITLLSHIHSS 313
L + L +N LLS+I+++
Sbjct: 450 LAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 167/437 (38%), Gaps = 107/437 (24%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E L+ C + ++ + K+ H +II+ L D+ N L++ Y+ + A ++FD M +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++VSW TM+ YT N+ + A+ ++ M G + + F S+VL AC ++ D + +
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACGVNCDALECKKL 184
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H + ++ + + LLD+Y KCG + D + + + W+SM++G
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIK----DAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQ+HA K GF
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+S +DMY KCG + + +F+ + E+++ W II G
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG---------------------- 338
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ + + +E + L + GM + TF+
Sbjct: 339 ------------------------------FAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 324 SALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L C L+ RF + T G + + S ++D+ R G + A EL
Sbjct: 369 SLLSVCGHTGLVEEGRRF---FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 382 LPKKDVVA-WSGLIMGC 397
+P + W L+ C
Sbjct: 426 IPFDPTASIWGSLLASC 442
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
SN+ N+ ++ +L++C+ ++ K H ++ E + L LI+ Y KCG ++
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M ER +VSW +I +N EA+ F EM K +E T VLSAC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-- 172
Query: 536 AGLVEEAWTI--FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
G+ +A + + ++ +L ++DL + G DA Q+ M K T
Sbjct: 173 -GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT- 230
Query: 594 WASML 598
W+SM+
Sbjct: 231 WSSMV 235
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 197/710 (27%), Positives = 326/710 (45%), Gaps = 82/710 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ AL + K++H ++K +D N L+S Y A +LF +
Sbjct: 67 LLHALHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRLFLSLP 125
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLG 124
N+VS+TT+++ + S R + A+ L+ M + PN + Y AVL AC SL G
Sbjct: 126 SPNVVSYTTLIS-FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFG 184
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
+H + + N L+ +Y K S KLF+Q ++A WN+++
Sbjct: 185 LQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPR------RDIASWNTII 238
Query: 183 SG------------------------------------------GKQVHAFCVKRGFEKE 200
S G+QVHA VK G E +
Sbjct: 239 SAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLMEGQQVHAHAVKLGLETD 298
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
LI Y K G +DD LF M RDV++WT ++ E L
Sbjct: 299 LNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNL---------- 348
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
A K+FD+ + +Y N++++G+ NEQ EA+ L + G+ + +
Sbjct: 349 -----ALKVFDEMPEKNSVSY------NTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDF 397
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
+ TS + AC L ++ + + QVHG V G+ + V + L+D+Y R G + A ++F
Sbjct: 398 SLTSVVDACGLLGDY--KVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFL 455
Query: 381 R--LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLAS 437
R L + V W+ +I G ++G A LF + + + ++ +S+L +C +
Sbjct: 456 RWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGH 515
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L GKQ+H +K G +++ MY KCG +DD + +F MP D+V+W +I G
Sbjct: 516 LDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISG 575
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA--GLVEEAWTIFTSMKPEYGL 555
+ + A+ + EM+ +KPN++TF+ ++SA R LV++ +F SM+ Y +
Sbjct: 576 NLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQI 635
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP HY + +LG G +A + I MPF+P +W +L C H N + A+
Sbjct: 636 EPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQ 695
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+LA P+DPS ++++SN+Y+ G WD VR+ ++ G K SWI
Sbjct: 696 NILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWI 745
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 276/550 (50%), Gaps = 29/550 (5%)
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH ++ +NTLL +Y KCGS+ T LF+ Y + + + L N +
Sbjct: 119 IHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRS 178
Query: 185 GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
K A G T ++++ + +G + + +
Sbjct: 179 NKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH--------- 229
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
CF F +AL+DMY+ C + A +FD+ + N+ WNSMI G+V N+
Sbjct: 230 --CFLNDPFVATALLDMYAKCGSMLLAENVFDEM------PHRNLVSWNSMIVGFVKNKL 281
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
AI + + S G D + +S L AC L+ + F QVHG IV G V
Sbjct: 282 YGRAIGVFREVLSLGP--DQVSISSVLSACAGLVELD--FGKQVHGSIVKRGLVGLVYVK 337
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
++L+D+Y + G + A +LF +DVV W+ +IMGC + A F+ MI +
Sbjct: 338 NSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVE 397
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ SS+ + +A+L +G +H+ +K G K +SL+ MY KCG + D +
Sbjct: 398 PDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQV 457
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
F+ E +VV WT +I Q+G A EAI F+EM+ + P ITF+ VLSAC H G +
Sbjct: 458 FRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKI 517
Query: 540 EEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLK 599
++ + F SM + ++P LEHY CMVDLLG+ G ++A + I MPF+PD +W ++L
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLG 577
Query: 600 ACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKK 658
AC H N ++ +AE+L P++P Y++LSN+Y GM + +VR+ G K+
Sbjct: 578 ACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKE 637
Query: 659 AGMSWIEVSS 668
+G SWI+V +
Sbjct: 638 SGCSWIDVKN 647
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 202/507 (39%), Gaps = 129/507 (25%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL+ + L + + +S+K +H +++ + N LL +YA S++ LF
Sbjct: 99 DLKHL---LNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLF 155
Query: 62 DEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ N+V+WTT++ + + +P A+ +N M G + PN F +SA+L AC+ +
Sbjct: 156 NTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG-IYPNHFTFSAILPACAHAA 214
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVAL 177
L G+ IH I + D + LLDMY KCGS L +FD+ + N+
Sbjct: 215 LLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM------PHRNLVS 268
Query: 178 WNSMLSG------------------------------------------GKQVHAFCVKR 195
WNSM+ G GKQVH VKR
Sbjct: 269 WNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKR 328
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF------- 248
G SL+DMY KCG +D LF +RDVV+W +I+GCF C F
Sbjct: 329 GLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYF 388
Query: 249 -----------------------TLSAL-------------------------VDMYSNC 260
+++AL V MY C
Sbjct: 389 QAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKC 448
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ +A ++F + + NV W +MI+ + + EAI L + + G+ +
Sbjct: 449 GSMLDAYQVFRE------TKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYI 502
Query: 321 TFTSALKACINLLNFNSRFAL-----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
TF S L AC + + F VH + G E Y + ++DL R+G ++ A
Sbjct: 503 TFVSVLSACSHTGKIDDGFKYFNSMANVHN--IKPGLE-HY---ACMVDLLGRVGRLEEA 556
Query: 376 LELFHRLP-KKDVVAWSGLIMGCTKHG 401
+P + D + W L+ C KH
Sbjct: 557 CRFIESMPFEPDSLVWGALLGACGKHA 583
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 435 LASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE--RDVVSWT 492
L SL+ Q+H+ V + +L+ +Y KCG I L LF P +VV+WT
Sbjct: 110 LKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I ++ + +A+ +F M + + PN TF +L AC HA L+ E I +
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 553 YGL-EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
L +P + ++D+ + G AE + EMP + + W SM+
Sbjct: 230 CFLNDPFVA--TALLDMYAKCGSMLLAENVFDEMPHR-NLVSWNSMI 273
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 233/417 (55%), Gaps = 10/417 (2%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+V+MY+ C L +AR++FD+ + ++ W ++I+G+ N + +A+ L +
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPT------KDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ + +T +S LKA + + Q+H + GY+ VGS L+D+YAR G++
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDP--GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
+A F +P K V+W+ LI G + G A L M N F SSV C
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSAC 300
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ + +L +GK VHA +K G + +L+DMY K G IDD +F + + DVVSW
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWN 360
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ GC Q+G KE + F++M++ ++PNEI+FL VL+AC H+GL++E F MK +
Sbjct: 361 TMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-K 419
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
Y +EP + HY VDLLG+ G D AE+ I EMP +P +W ++L AC H N +L
Sbjct: 420 YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVY 479
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
AE+ P D ++LSN+YA+ G W ++KVRK K+ G +K+ SW+E+ +
Sbjct: 480 AAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIEN 536
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 181/446 (40%), Gaps = 96/446 (21%)
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK-LEYDTVLMNTLLDMYVKC 153
+++ GS+ P+ +YS +LK C+ G ++ GR++H + L+ VL N +++MY KC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 154 GSL--TRKLFDQYS-----NWAASAYG---------NVALWNSML--------------- 182
G L R++FD+ W A G + L+ ML
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196
Query: 183 --SG-------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
SG G Q+HAFC+K G++ ++L+DMY +CG +D F+ MP + V
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
SW +I G ARK
Sbjct: 257 SWNALISG-----------------------HARK------------------------- 268
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
+ E A+ LL + +T++S AC ++ VH ++ SG +
Sbjct: 269 ----GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQ--GKWVHAHMIKSGLK 322
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
L +G+ L+D+YA+ G++ A +F RL K DVV+W+ ++ GC +HGL F M
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ + N+ VL CS L G K E + + +D+ + G +
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442
Query: 474 DDGLALFKFMP-ERDVVSWTGIIVGC 498
D + MP E W ++ C
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGAC 468
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 42/276 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ C + ++QG+ +H ++ + L + N +++MYA L+DA ++FDEM K+
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD 153
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+WT ++ ++ N RP A+ L+ ML G ++PN F S++LKA LD G +H
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLG-LQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVA----- 176
+ + + + L+DMY +CG + + FD +W A G+
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272
Query: 177 -----LWN-----------------------SMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
LW L GK VHA +K G + +L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
DMY K G IDD +F+ + + DVVSW ++ GC +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C +++QGK +H +IK GL F GN LL MYA S++DA ++FD + + ++VSW
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSW 359
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
TM+T + + + ML G +EPN + VL ACS SG LD G E +
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIG-IEPNEISFLCVLTACSHSGLLDEGLYYFELMK 418
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTR-KLFDQYSNWAASAYGNVALWNSMLSGGK----- 186
+ K+E D T +D+ + G L R + F + +A A+W ++L +
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTA----AVWGALLGACRMHKNM 474
Query: 187 QVHAFCVKRGFE 198
++ + +R FE
Sbjct: 475 ELGVYAAERAFE 486
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 510 YFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
Y ++IQ L P+ + +L C G VE+ + + + L+ HL +V++
Sbjct: 73 YALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNM 132
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+ GC DDA ++ EMP K D W +++ +N + ++ Q+L
Sbjct: 133 YAKCGCLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQML 181
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 245/434 (56%), Gaps = 11/434 (2%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T +I C+ S + + L+ +Y+ C+ L +AR++FD+ NV W +MIS Y
Sbjct: 114 THMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ------KNVVSWTAMISAYS 167
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
EA+ L + S + +TF + L +C L F + Q+H + + YE
Sbjct: 168 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET--GRQIHSIAIKRNYESH 225
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VGS+L+D+YA+ G + A +FH LP++DVVA + +I G + GL+ A LFR +
Sbjct: 226 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQI 285
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ N +SVL S LA+L GKQVH+ ++ G + L SLIDMY KCG +
Sbjct: 286 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCY 345
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACR 534
+F MPER +SW ++VG ++G A+E + F+ M ++++KP+ IT+L VLS C
Sbjct: 346 ARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 405
Query: 535 HAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H L + IF +M + G+EP + HY C+VDLLG+AG ++A I +MPF P I
Sbjct: 406 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAI 465
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGK 652
W S+L +C H++ ++ I+ ++LL PE+ YV+LSN+YA+ G W+ + +R +
Sbjct: 466 WGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQE 525
Query: 653 KLGEKKAGMSWIEV 666
K K+ G SW+E+
Sbjct: 526 KAVTKEPGRSWVEL 539
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 175/439 (39%), Gaps = 107/439 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +R+I++G+ +H +IK ++ L+ +Y L DA ++FDEM +KN+
Sbjct: 97 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNV 156
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++AY+ A+ L+ ML EPN F ++ +L +C S + GR IH
Sbjct: 157 VSWTAMISAYSQRGFAFEALNLFVEMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHS 215
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--------------------------------- 156
+ E + ++LLDMY K G +
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275
Query: 157 TRKLFDQYS----NWAASAYGNVALWNSMLSG---GKQVHAFCVKRGFEKEDVTLTSLID 209
KLF Q N + Y +V S L+ GKQVH+ ++ G V L SLID
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + +F+ MPER +SW ++VG YS + E +L
Sbjct: 336 MYSKCGNVCYARRIFDSMPERTCISWNAMLVG---------------YSKHGMAREVLEL 380
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F ++ E+N+ + DS T+ + L C
Sbjct: 381 FK-----------------------LMREENK-------------VKPDSITYLAVLSGC 404
Query: 330 INLLNFNSRFALQVHGLIV-------TSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S L+ GL + G E D ++DL R G V+ A + ++
Sbjct: 405 -------SHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 457
Query: 383 PKKDVVA-WSGLIMGCTKH 400
P A W L+ C H
Sbjct: 458 PFVPTAAIWGSLLGSCRVH 476
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 106/195 (54%)
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R +VH ++ + Y + + LI LY + + A E+F +P+K+VV+W+ +I
Sbjct: 107 REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAY 166
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ G A LF +M+ S+ + N F +++L C G+Q+H+ +KR +E
Sbjct: 167 SQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHM 226
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+SL+DMY K G I D +F +PERDVV+ T II G Q G +EA+ F+++
Sbjct: 227 FVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIE 286
Query: 518 RLKPNEITFLGVLSA 532
+ N +T+ VL+A
Sbjct: 287 GMNSNSVTYASVLTA 301
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
++L C ++R G++VH +K + T LI +Y KC + D +F MP++
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+VVSWT +I Q G A EA+ F EM++S +PN TF +L++C + L E
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC-YGSLGFETGRQI 213
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
S+ + E H+ ++D+ ++G DA + +P
Sbjct: 214 HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/643 (28%), Positives = 310/643 (48%), Gaps = 40/643 (6%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V ++ C + ++ G LH R ++ + + N L++MY L DA +F M
Sbjct: 165 VTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVE 224
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
++I++W ++T Y + A+ LY ML+ G +P+ + A+L + L +L
Sbjct: 225 RDIIAWNALITEYGQHGHVEEAVLLYQLMLQEG-CKPDKVTFVALLTMSNGPEALTEVKL 283
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H I + + L L+ MY KC SL TR LF++ NV WN M++
Sbjct: 284 VHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQR------NVISWNVMVTA 337
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
Q+ + G + ++VT L+++ ++ G R V W
Sbjct: 338 YAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLG---------RKVHGW 388
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
I G E ++L++MY C + +A +FD NV W +M++ Y
Sbjct: 389 --IAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFD------GILQRNVISWTAMLTAYS 440
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ + A+ L IH SG+ TF AL AC+ + VH V SG ++D
Sbjct: 441 RQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDK--GRLVHSCAVQSGNDID 498
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+GS L+ +Y R G+++ A F +K+ V WS +I +HG + R M
Sbjct: 499 VSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQ 558
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEI 473
D++ +S L CS LA LR GK++H++ +R F+ E T+T SL+ MY KCG +
Sbjct: 559 QQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSL 618
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
D +F+ +D + W II G Q+ + ++A+ F M Q + P+ +TF+ +LS C
Sbjct: 619 DCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVC 678
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H GL++E + SM E GLEP ++Y C++DLLG+AG +AE+ I + +P
Sbjct: 679 SHGGLLDEGVYAYASM-VELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIET 737
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
S+L +C++H + + AE ++ P S +V+LS++Y+
Sbjct: 738 LTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYS 780
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/615 (23%), Positives = 264/615 (42%), Gaps = 98/615 (15%)
Query: 111 VLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAAS 170
+L+AC LD+ R +H +I R L+ L N L+ Y KC SL D + +
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLD----DAWETFERM 56
Query: 171 AYGNVALWNSMLSGGKQVHAFCVK---------RGFEKEDVTLTSLIDMYLKCGEIDDGL 221
+Y NV W +++ Q H + G + +++TL + + MY CG +DD
Sbjct: 57 SYKNVYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAK 116
Query: 222 ALFNFMPER----------------------------------DVVSWTGIIVGCFECSC 247
+F+ MP R + V++ ++ C +
Sbjct: 117 RVFDAMPARNVITWTAMIGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEF 176
Query: 248 FTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
+ +AL+ MY C L +AR +F ++ ++ W
Sbjct: 177 LEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIF------SSMVERDIIAW 230
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ----V 343
N++I+ Y + EEA+ L + G D TF + L N AL V
Sbjct: 231 NALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMS------NGPEALTEVKLV 284
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H IV SG ++ +G+ L+ +Y++ +++ LF ++P+++V++W+ ++ KHGL
Sbjct: 285 HSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLG 344
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A + M + +L VC+ A L+ G++VH + + E + I SL
Sbjct: 345 RKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSL 404
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++MY +CGE++ +F + +R+V+SWT ++ + R A+ F + S +KP
Sbjct: 405 LNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTC 464
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
ITFL L AC A +++ + S + G + + +V + G+ G DA+
Sbjct: 465 ITFLEALDACVGAEALDKGRLVH-SCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFD 523
Query: 584 EMPFKPDKTIWASMLKACETHNNTK----LVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
+ + + W++M+ A H + + + +Q L SP + +TL
Sbjct: 524 DTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSP---------ATFASTLS 574
Query: 640 MWDSLSKVRKAGKKL 654
+L+ +R+ GK++
Sbjct: 575 ACSNLADLRE-GKRI 588
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 249/445 (55%), Gaps = 26/445 (5%)
Query: 248 FTLSALVDMYSNCNVLCEA---RKLFDQ------YSSWAASAY--------------GNV 284
+T +AL++MYS L E +K+FD+ YS +Y ++
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 201
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVH 344
WN++ISG N +E+A+ ++ + ++ + DS+T +S L +N ++H
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK--GKEIH 259
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
G + +GY+ D +GS+LID+YA+ V + +F+ LP+ D ++W+ +I GC ++G+
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD 319
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
F+ M+ + N SS++ C+ L +L GKQ+H + ++ F+ ++L+
Sbjct: 320 EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALV 379
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY KCG I +F M D+VSWT +I+G +G A +AI+ F+ M +KPN +
Sbjct: 380 DMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYV 439
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
F+ VL+AC HAGLV+EAW F SM +Y + P LEHY + DLLG+ G ++A + I++
Sbjct: 440 AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISD 499
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
M +P ++W+++L AC H N +L ++++L P++ YV+LSN+Y+ G W
Sbjct: 500 MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDA 559
Query: 645 SKVRKAGKKLG-EKKAGMSWIEVSS 668
K+R A + G +KK SWIE+ +
Sbjct: 560 RKLRIAMRDKGMKKKPACSWIEIKN 584
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 145/647 (22%), Positives = 264/647 (40%), Gaps = 163/647 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM-ARKN 68
L++ +S Q K LH +I++ L + +LS+Y++ L+D+ +F+ + +
Sbjct: 12 LQNPSSVKSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPT 70
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
++W +++ YTS+ ++ + ML G P+ ++ +VLK+C+L DL G +H
Sbjct: 71 TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKY-PDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLT-----RKLFDQ------YSNWAASAY----- 172
I R + +D N L++MY K SL +K+FD+ YS +Y
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189
Query: 173 ---------GNVALWNSMLSG--------------------------------------- 184
++ WN+++SG
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 185 -----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
GK++H + ++ G++ + +SLIDMY KC +DD +F +P+ D +SW II
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
GC + F E K F Q
Sbjct: 310 AGCVQNGMFD---------------EGLKFFQQ--------------------------- 327
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
L++ I + + +F+S + AC +L + Q+HG I+ S ++ + +
Sbjct: 328 -----MLIAKIKPNHV-----SFSSIMPACAHLTTLH--LGKQLHGYIIRSRFDGNVFIA 375
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
S L+D+YA+ GN+++A +F ++ D+V+W+ +IMG HG A LF+ M
Sbjct: 376 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 435
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N +VL CS HA V ++ Y D
Sbjct: 436 PNYVAFMAVLTACS-----------HAGLVDEAWK------------YFNSMTQD----- 467
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
++ +P + + + G+ GR +EA + +M ++P + +L+ACR +
Sbjct: 468 YRIIPGLE--HYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACRVHKNI 522
Query: 540 EEAWTIFTSMKPEYGLEPH-LEHYYCMVDLLGQAGCFDDAEQLIAEM 585
E A + K + ++P + Y + ++ AG + DA +L M
Sbjct: 523 ELAEKV---SKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAM 566
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/687 (29%), Positives = 324/687 (47%), Gaps = 105/687 (15%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ T N +LS A +++A LFD M +N VSW M+ A + + R A L++ M
Sbjct: 47 RNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRM 106
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ F ++ ++ + GDL+L R + +R+ +K T N ++ Y K G
Sbjct: 107 -----PVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKC---TACYNAMISGYAKNGR 158
Query: 156 L--TRKLFDQYS-----NWAASAYG-------------------NVALWNSMLSGGKQVH 189
KL + +W ++ G ++ WN ML+G +
Sbjct: 159 FDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTG 218
Query: 190 AFCVKRGF----EKEDV-TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
F E +V + +L++ Y + G I D LF+ MPER+VV+W
Sbjct: 219 DLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAW--------- 269
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+ ++D Y + + + EA KLFD+ N W ++ISG + +EA
Sbjct: 270 ------NVMLDGYVHLSPIEEACKLFDEMP------IKNSISWTTIISGLARAGKLQEAK 317
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF--ALQVHGLIVTSGYELDYIVGSNL 362
LL + S C+ + T N+ + R ++VH D + + +
Sbjct: 318 DLLDKM--SFNCVAAKTALMHGYLQRNMADDARRIFDGMEVH----------DTVCWNTM 365
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-----INSN 417
I Y + G ++ A+ LF R+P KD+V+W+ +I G + G A +FR M ++ N
Sbjct: 366 ISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWN 425
Query: 418 QDVNQFI--------------------------ISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ F+ +S L+ C+ LA L G+Q+H V+
Sbjct: 426 SVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRS 485
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G + +LI Y KCG I + +F M +D+VSW +I G NG+ EAIA F
Sbjct: 486 GHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVF 545
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+EM + ++P+E+TF+G+LSAC HAGL++E F SM EY L+P EHY CMVDLLG+
Sbjct: 546 REMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGR 605
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVML 631
AG ++A +L+ M +P+ +W ++L AC H N +L + AE+L P S YV+L
Sbjct: 606 AGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLL 665
Query: 632 SNVYATLGMWDSLSKVRKAGKKLGEKK 658
SN+ A G WD K R + K+ G K
Sbjct: 666 SNISAEAGKWDESEKARASIKEKGVNK 692
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 128/562 (22%), Positives = 233/562 (41%), Gaps = 113/562 (20%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
S ++ + LL+ Y + DA LFD M +N+V+W M+ Y A +L++
Sbjct: 232 SPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDE 291
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M S+ ++ ++ + +G L + + ++++ + T LM+ L +
Sbjct: 292 MPIKNSIS-----WTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNM--A 344
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
R++FD + WN+M+SG Y++C
Sbjct: 345 DDARRIFDGME------VHDTVCWNTMISG--------------------------YVQC 372
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G +++ + LF MP +D+VSW +I G Y+ + +A +F + +
Sbjct: 373 GILEEAMLLFQRMPNKDMVSWNTMIAG---------------YAQDGQMHKAIGIFRRMN 417
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N WNS+ISG+V N++ +A+ + D T+ S L+AC NL
Sbjct: 418 R------RNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAV 471
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+ Q+H L+V SG+ D G+ LI YA+ G + A ++F + KD+V+W+ LI
Sbjct: 472 LH--VGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALI 529
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G +G + A +FR+M + ++ +L CS HA
Sbjct: 530 DGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACS-----------HA-------- 570
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC-----GQNGRAKEAIA 509
G ID+GL F M + ++ C G+ G+ EA
Sbjct: 571 ----------------GLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFE 614
Query: 510 YFQEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
Q M +++PN + +L AC ++ L + A + ++P +Y +
Sbjct: 615 LVQGM---QIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKA-----SNYVLLS 666
Query: 567 DLLGQAGCFDDAEQLIAEMPFK 588
++ +AG +D++E+ A + K
Sbjct: 667 NISAEAGKWDESEKARASIKEK 688
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C + G+ LH +++ G D F GN L+S YA + +A ++FDEM K+I
Sbjct: 463 LRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDI 522
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ Y SN + AI ++ M E V P+ + +L ACS +G +D G
Sbjct: 523 VSWNALIDGYASNGQGTEAIAVFREM-EANGVRPDEVTFVGILSACSHAGLIDEGLFFFY 581
Query: 130 RITREKL 136
+T+E L
Sbjct: 582 SMTKEYL 588
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 435 LASLRRGKQVHAFCVKRGFE----KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
L L R Q+ A +R F+ + +T +++ + G ID+ ALF MP R+ VS
Sbjct: 25 LTRLARSGQLAA--ARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVS 82
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I +GR +A + F M +E ++ ++S G +E A + M
Sbjct: 83 WNAMIAALSDHGRVADARSLFDRMPVR----DEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ Y M+ + G FDDA +L+ EMP PD W S L
Sbjct: 139 G----DKCTACYNAMISGYAKNGRFDDAMKLLREMP-APDLVSWNSAL 181
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/435 (19%), Positives = 150/435 (34%), Gaps = 127/435 (29%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
C++ ++ + ++S A L +A L D+M+ + + T ++ Y +
Sbjct: 286 CKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMAD 345
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A R+++ M + +V ++ ++ G L+ L+ +R+ + D V NT+
Sbjct: 346 DARRIFDGMEVHDTV-----CWNTMISGYVQCGILEEAMLLFQRMPNK----DMVSWNTM 396
Query: 147 LDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSG-------------------- 184
+ Y + G + + +F + + N WNS++SG
Sbjct: 397 IAGYAQDGQMHKAIGIFRRMNR------RNTVSWNSVISGFVQNDRFVDALHHFMLMRRG 450
Query: 185 ------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
G+Q+H V+ G + +LI Y KCG I +
Sbjct: 451 TNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEA 510
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+F+ M +D+VSW +I G
Sbjct: 511 KQIFDEMVYKDIVSWNALIDG--------------------------------------- 531
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
Y N Q EAI + + ++G+ D TF L AC S
Sbjct: 532 -------------YASNGQGTEAIAVFREMEANGVRPDEVTFVGILSAC-------SHAG 571
Query: 341 LQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGL 393
L GL +Y++ + ++DL R G + A EL + + + W L
Sbjct: 572 LIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGAL 631
Query: 394 IMGCTKHGLNSLAYL 408
+ C H + LA L
Sbjct: 632 LGACHMHKNHELAQL 646
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 296/592 (50%), Gaps = 44/592 (7%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNW 167
+ +LKAC DL G+++H + + T L N +Y KCGSL + +++
Sbjct: 12 FRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSL----HNAQTSF 67
Query: 168 AASAYGNVALWNSMLSG-GKQVHAFCVKRGFEK----EDVTLTSLIDMYLKCGEIDDGLA 222
+ Y NV +N++++ K +R F++ + V+ +LI Y GE L
Sbjct: 68 HLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLR 127
Query: 223 LFNFMPER----DVVSWTGIIVGC-------FECSCFTL-----------SALVDMYSNC 260
LF + E D + +G+I C + CF + +A++ YS
Sbjct: 128 LFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRK 187
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
L EAR++F + + WN+MI + + EA+ L + G+ +D +
Sbjct: 188 GFLSEARRVFREMGEGGGR---DEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244
Query: 321 TFTSALKA--CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL-GNVKSALE 377
T S L A C+ L +F HG+++ SG+ + VGS LIDLY++ G++ +
Sbjct: 245 TMASVLTAFTCVKDLVGGRQF----HGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRK 300
Query: 378 LFHRLPKKDVVAWSGLIMGCTKH-GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + D+V W+ +I G + + L+ FR+M + + V CS L+
Sbjct: 301 VFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLS 360
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S GKQVHA +K +++ +L+ MY KCG + D +F MPE + VS +I
Sbjct: 361 SPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMI 420
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+G E++ F+ M++ + PN ITF+ VLSAC H G VEE F MK + +
Sbjct: 421 AGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCI 480
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP EHY CM+DLLG+AG +AE++I MPF P WA++L AC H N +L A
Sbjct: 481 EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ L P + + YVMLSN+YA+ W+ + V++ ++ G +KK G SWIE+
Sbjct: 541 EFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEI 592
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 250/550 (45%), Gaps = 54/550 (9%)
Query: 24 SLHCRIIKYGLSQ--DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
SLH + L+Q ++F+ N L++ YA + ++ A ++FDE+ + +IVS+ T++ AY
Sbjct: 59 SLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYAD 118
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+RL+ + E + +GF S V+ AC D+ L R +H + +
Sbjct: 119 RGECGPTLRLFEEVREL-RLGLDGFTLSGVITAC--GDDVGLVRQLHCFVVVCGHDCYAS 175
Query: 142 LMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAF- 191
+ N +L Y + G L+ R++F + + WN+M+ G + V F
Sbjct: 176 VNNAVLACYSRKGFLSEARRVFREMGEGGGR---DEVSWNAMIVACGQHREGMEAVGLFR 232
Query: 192 -CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
V+RG + + T+ S++ + ++ G M I F +
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMM-----------IKSGFHGNSHVG 281
Query: 251 SALVDMYSNC-NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ-NEEAITLLS 308
S L+D+YS C + E RK+F++ ++ ++ LWN+MISG+ L E +E+ +
Sbjct: 282 SGLIDLYSKCAGSMVECRKVFEEITA------PDLVLWNTMISGFSLYEDLSEDGLWCFR 335
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYA 367
+ +G D +F AC NL + QVH L + S + + V + L+ +Y+
Sbjct: 336 EMQRNGFRPDDCSFVCVTSACSNL--SSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYS 393
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ GNV A +F +P+ + V+ + +I G +HG+ + LF M+ + N +
Sbjct: 394 KCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIA 453
Query: 428 VLKVCSCLASLRRGKQV-----HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
VL C + G++ FC+ E E + +ID+ + G++ + + +
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFCI----EPEAEHYSCMIDLLGRAGKLKEAERIIET 509
Query: 483 MP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVE 540
MP + W ++ C ++G + A+ E + RL+P N ++ + + A E
Sbjct: 510 MPFNPGSIEWATLLGACRKHGNVELAVKAANEFL--RLEPYNAAPYVMLSNMYASAARWE 567
Query: 541 EAWTIFTSMK 550
EA T+ M+
Sbjct: 568 EAATVKRLMR 577
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 235/423 (55%), Gaps = 13/423 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F L+ L++MYS+C+ AR + D A + WN++I+GY+ +A+
Sbjct: 129 FVLNTLINMYSSCSYPSTARSVLDS----APKGASDTVSWNTIIAGYIHAGLPNKALQAF 184
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S + + +D T +AL AC + H L+VT+G+E++ +GS+LI +YA
Sbjct: 185 SQMAKGQVMLDDVTLLNALVACARTCMM--KVGKLCHALLVTNGFEINCYMGSSLISMYA 242
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G V+ A +F +P ++ V W+ +I G T+ G + A LFRDM + V+ IS+
Sbjct: 243 KCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATIST 302
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
V+ C + +L G+ VHA+C G K+ SLIDMY KCG+I +F M +RD
Sbjct: 303 VVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRD 362
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
SWT +I+G NG + EA+ F +M + + PNEITFLGVL++C H GLVE+ + F
Sbjct: 363 NFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHF 421
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
M YG+ P +EHY CMVDLLG+A +AEQ I EMP PD +W S+L AC T
Sbjct: 422 HRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGE 481
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK---AGKKLGEKKAGMSW 663
L +AE++ P V+LS VYAT W +KVR +G+K K+ G S+
Sbjct: 482 VGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK--TKQPGCSF 539
Query: 664 IEV 666
IEV
Sbjct: 540 IEV 542
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 118/279 (42%), Gaps = 55/279 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-- 66
AL + S+ G LH +K GLS D F N L++MY+ + + A + D +
Sbjct: 99 ALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGA 158
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+ VSW T++ Y PN A++ ++ M + G V + L AC+ + + +G+L
Sbjct: 159 SDTVSWNTIIAGYIHAGLPNKALQAFSQMAK-GQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
H + E + + ++L+ MY KCG + R++FD + N W SM+SG
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR------NAVCWTSMISG 271
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
G+ VHA+C G K+
Sbjct: 272 YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKD 331
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
SLIDMY KCG+I +F M +RD SWT I+
Sbjct: 332 ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIM 370
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 179/474 (37%), Gaps = 110/474 (23%)
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SL 156
G + + + SA L + + +G +H + L DT ++NTL++MY C S
Sbjct: 87 GYMPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPST 146
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSG-------------------------------- 184
R + D A+ + WN++++G
Sbjct: 147 ARSVLDSAPKGAS----DTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNA 202
Query: 185 ------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
GK HA V GFE +SLI MY KCG+++D +F+ MP+R+
Sbjct: 203 LVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNA 262
Query: 233 VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
V WT +I G
Sbjct: 263 VCWTSMISG--------------------------------------------------- 271
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
Y Q++EAI L + +G+ +D T ++ + +C + + VH G
Sbjct: 272 -YTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALD--LGRYVHAYCDIHGL 328
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D V ++LID+Y++ G++K A ++F + K+D +W+ +IMG +GL+ A LF
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQ 387
Query: 413 MINSNQDV-NQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
M + N+ VL CS + +G + H G ++D+ +
Sbjct: 388 MEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRA 447
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+ + K MP D V W ++ C G A Y E IQ L+PN+
Sbjct: 448 KLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLA-EYVAERIQV-LEPNK 499
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ AL C + +K GK H ++ G + + G++L+SMYA + DA ++
Sbjct: 194 LDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRI 253
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M +N V WT+M++ YT + AI+L+ M + V+ + S V+ +C G
Sbjct: 254 FDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDM-QIAGVKVDDATISTVVSSCGQMGA 312
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQY 164
LDLGR +H L D + N+L+DMY KCG + +K +D +
Sbjct: 313 LDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDI-KKAYDIF 355
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
++ + +S+ L + + S+ G Q+HA VK G + L +LI+MY C ++
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSV 150
Query: 480 FKFMPE--RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
P+ D VSW II G G +A+ F +M + ++ +++T L L AC
Sbjct: 151 LDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTC 210
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
++ + + ++ G E + ++ + + G +DA ++ MP + + W SM
Sbjct: 211 MM-KVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTSM 268
Query: 598 LKA 600
+
Sbjct: 269 ISG 271
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D I + CGQ ++ G+ +H +GL +DI N+L+ MY+ + A+ +
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M +++ SW T++ + +N A+ L+ M E G V PN + VL +CS G
Sbjct: 355 FCGMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 413
Query: 121 LDLG 124
++ G
Sbjct: 414 VEQG 417
>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
Length = 810
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/736 (27%), Positives = 329/736 (44%), Gaps = 113/736 (15%)
Query: 22 GKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
G LH IK G+ D +T N LL Y+ L A +FDE +N V+WT +V+A
Sbjct: 77 GSQLHASGIKLGVVFADTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAA 136
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS--LSGDLDLGRLIHERITREKLEY 138
P +RL+ ML G PN F ++ L AC ++ D+ LG +H R L
Sbjct: 137 RGGAPGLGLRLFASMLRSGFC-PNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHG 195
Query: 139 DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-------------- 184
+ + ++L+ +Y K G + ++ AS +VA WN+ML G
Sbjct: 196 NPYVGSSLMLVYAKHGRVAAA--ERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTV 253
Query: 185 ------------------------------GKQVHAFCVKRGFEKEDVT-LTSLIDMYLK 213
G+QVH V+ E + + + +L+DMY K
Sbjct: 254 ALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFK 313
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVG---------CF----ECSC------------- 247
G+ + +F + +D VSW +I G CF C C
Sbjct: 314 AGQKETAADIFGKIRWKDTVSWNTMISGLEDERAAADCFVDMARCGCRSNQVTFSVMLRL 373
Query: 248 ---------FTLS-------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
F L+ A ++M S C +L A Y + NV
Sbjct: 374 SGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCA------YGYFCDLGVRNVV 427
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN MI+GY L+ + +A+ L + G D +T+ + L A + ++R QVH
Sbjct: 428 TWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQ--DHDARNHEQVHA 485
Query: 346 LIVTSGYELDYIVGSNLIDLYARLGN-VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
++ G+ V ++LI A LG+ V L++ + D+V+W I KHGL
Sbjct: 486 SVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQ 545
Query: 405 LAYLLFRD-MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A LF ++ + ++FI+ ++L C+ A +R+ + +H+ V+ G K ++L
Sbjct: 546 EALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSAL 605
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK-PN 522
+D Y KCG+I F + +D + + ++ +G +E ++ +QEM Q +L P
Sbjct: 606 VDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPT 665
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
TF+ +SAC H GLVE+ +F+SM +G+ P +Y C++DLL + G ++A +I
Sbjct: 666 PATFVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVI 725
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
MPF+P +W S++ C H N +L + +EQ+L +P YV LS+VYA G W
Sbjct: 726 QAMPFQPWPAVWRSLMNGCRIHGNKELGLLASEQILRMAPNSDGAYVSLSHVYAEDGDWR 785
Query: 643 SLSKVRKAGKKLGEKK 658
S R +K+ E +
Sbjct: 786 SAEDAR---RKMAENQ 798
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 309/642 (48%), Gaps = 71/642 (11%)
Query: 47 MYADF--TSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPN 104
++A F T ++ H F + ++ ++++YT+N P + Y HM + +
Sbjct: 28 LHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALD 87
Query: 105 GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD 162
F+ ++LKAC+ + DLGR +H + D + N L++MY KCG L R +FD
Sbjct: 88 NFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFD 147
Query: 163 QYSNWAASAYGNVALWNSMLSGGKQVHAF-----CVKR----GFEKEDVTLTSLIDMY-- 211
Q +V W +ML + AF V+ G + V L SLI ++
Sbjct: 148 QMPER------DVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGN 201
Query: 212 ---LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
+K G G + N E+ VS T +AL+DMY L A++
Sbjct: 202 LLDMKSGRAVHGYIVRNVGDEKMEVSMT--------------TALIDMYCKGGCLASAQR 247
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
LFD+ S + V W MI+G + + + +E + + + + T S +
Sbjct: 248 LFDRLSKRS------VVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITE 301
Query: 329 C--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
C + L+ F H ++ +G+ + + + LID+Y + G V A LF+ + KKD
Sbjct: 302 CGFVGTLDLGKWF----HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKD 357
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
V WS LI + LF +M+N++ N + S+L +C+ +L GK HA
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHA 417
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ + G E + I T+LI+MY KCG++ +LF +RD+ W ++ G +G KE
Sbjct: 418 YINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKE 477
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F EM ++PN+ITF+ + AC H+GL +EHY C+V
Sbjct: 478 ALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------MEHYGCLV 517
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AG D+A +I MP +P+ IW ++L AC+ H N L + A ++L P++
Sbjct: 518 DLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCG 577
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
V+ SN+YA+ W+ ++ VR+A G KK G+SWIEVS
Sbjct: 578 YSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVS 619
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 198/497 (39%), Gaps = 142/497 (28%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C Q S G+ LH K G + D+F N L++MY L A +FD+M +++
Sbjct: 95 LKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDV 154
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWTTM+ Y +K A+RL M ++ V+ +G +++ D+ GR +H
Sbjct: 155 VSWTTMLGCYVRSKAFGEALRLVREM-QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213
Query: 130 RITR----EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
I R EK+E + L+DMY K G L ++LFD+ S + V W M++
Sbjct: 214 YIVRNVGDEKMEVS--MTTALIDMYCKGGCLASAQRLFDRLSKRS------VVSWTVMIA 265
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G GK HA+ ++ GF
Sbjct: 266 GCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGM 325
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF----------- 248
+T+LIDMY KCG++ ALFN + ++DV W+ +I SC
Sbjct: 326 SLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEML 385
Query: 249 ---------TLSALVDM-----------------------------------YSNCNVLC 264
T+ +L+ + Y+ C +
Sbjct: 386 NNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVT 445
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
AR LF++ + ++ +WN+M++G+ ++ +EA+ L S + S G+ + TF S
Sbjct: 446 IARSLFNE------AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVS 499
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP- 383
AC + GL+ G L+DL R G++ A + +P
Sbjct: 500 IFHACSH------------SGLMEHYGC---------LVDLLGRAGHLDEAHNIIENMPM 538
Query: 384 KKDVVAWSGLIMGCTKH 400
+ + + W L+ C H
Sbjct: 539 RPNTIIWGALLAACKLH 555
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 56/359 (15%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ + CG ++ GK H +++ G + L+ MY + A LF+ +
Sbjct: 295 LLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVK 354
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K++ W+ +++AY + L+ ML V+PN ++L C+ +G LDLG+
Sbjct: 355 KKDVKIWSVLISAYAHVSCMDQVFNLFVEMLN-NDVKPNNVTMVSLLSLCAEAGALDLGK 413
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS 183
H I R LE D +L L++MY KCG +T R LF++ + ++ +WN+M++
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE------AMQRDIRMWNTMMA 467
Query: 184 G------GKQVHAFCVK---RGFEKEDVTLTS----------------LIDMYLKCGEID 218
G GK+ + G E D+T S L+D+ + G +D
Sbjct: 468 GFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEHYGCLVDLLGRAGHLD 527
Query: 219 DGLALFNFMPER-DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD------ 271
+ + MP R + + W ++ C L + ARK+ +
Sbjct: 528 EAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVA-----------ARKILELDPQNC 576
Query: 272 QYSSWAASAYGNVALWNSMIS-GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
YS ++ Y + WN + S ++ + LS I SG + F S KAC
Sbjct: 577 GYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSG---SVHHFKSGDKAC 632
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 202/711 (28%), Positives = 329/711 (46%), Gaps = 119/711 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
L+ C S+++ + LH I+ SQ F NN+LSMYA SL D+H +FD+M R
Sbjct: 17 LQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPR 76
Query: 67 KNIVSWTTMVTAYTSNKRPNWAI---RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
+ IVS+ ++ AY S PN AI LY M+ G + P+ ++++L+A SL
Sbjct: 77 RTIVSYNALLAAY-SRASPNHAISALELYTQMVTNG-LRPSSTTFTSLLQASSLLEHWWF 134
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
G +H + + L D L +LL+MY CG L+ + W +VA WNS++
Sbjct: 135 GSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSA---ELVFWDMVDRDHVA-WNSLIM 189
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G G+ +HA + R
Sbjct: 190 GYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSL 249
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ +L+DMY G + +F+ M D+VSW +I G
Sbjct: 250 DLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAG------------------ 291
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI-- 317
Y NE E+A+ L + MC
Sbjct: 292 ----------------------------------YSENEDGEKAMNLFVQLQE--MCFPK 315
Query: 318 -DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D YT+ + A + +S + +H ++ +G+E VGS L+ +Y + +A
Sbjct: 316 PDDYTYAGIISA--TGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAW 373
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + KDVV W+ +I G +K A F M++ +V+ +++S V+ C+ LA
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
LR+G+ +H + VK G++ E SLIDMY K G ++ +F + E D+ W ++
Sbjct: 434 VLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLG 493
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G +G +EA+ F+E+++ L P+++TFL +LSAC H+ LVE+ ++ M GL
Sbjct: 494 GYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMN-SIGLI 552
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK-TIWASMLKACETHNNTKLVSIIAE 615
P L+HY CMV L +A ++AE++I + P+ D +W ++L AC + N K+ AE
Sbjct: 553 PGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAE 612
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
++L ED V+LSN+YA WD ++++R+ + L +K G+SWIE
Sbjct: 613 EVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIE 663
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 26/335 (7%)
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL---DYIVGSNLIDLYARLGNV 372
C+ S L+ C + + R A Q+H LI+T+ V +N++ +YAR G++
Sbjct: 7 CVAEGHALSLLQKCSTVTSL--REARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSL 64
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTK----HGLNSLAYLLFRDMINSNQDVNQFIISSV 428
+ +F ++P++ +V+++ L+ ++ H +++L L+ M+ + + +S+
Sbjct: 65 TDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALE--LYTQMVTNGLRPSSTTFTSL 122
Query: 429 LKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERD 487
L+ S L G +HA K G DI L TSL++MY CG++ +F M +RD
Sbjct: 123 LQASSLLEHWWFGSSLHAKGFKLGLN--DICLQTSLLNMYSNCGDLSSAELVFWDMVDRD 180
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR-----HAGLVEEA 542
V+W +I+G +N + +E I F +M+ P + T+ VL++C +G + A
Sbjct: 181 HVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHA 240
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
I ++ L+ HL++ +VD+ AG A ++ + M PD W SM+
Sbjct: 241 HVIVRNV----SLDLHLQN--ALVDMYCNAGNMQTAYRIFSRME-NPDLVSWNSMIAGYS 293
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
+ + + + QL P Y + AT
Sbjct: 294 ENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISAT 328
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 251/462 (54%), Gaps = 49/462 (10%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSS--WAASAYGNVALWNSMISGYVLNEQNEEA 303
S F ++ +VD+ CN E +Y++ + A N L+N+MI Y N+ A
Sbjct: 45 SSFLVTKMVDV---CNHHAET-----EYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLA 96
Query: 304 IT----LLSHIHSSGMCI-DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
IT +L H H D +TF +K+C L+ ++ QVHG + G + + +V
Sbjct: 97 ITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYD--LGKQVHGHVFKFGQKSNTVV 154
Query: 359 GSNLIDLYA-------------------------------RLGNVKSALELFHRLPKKDV 387
++L+++Y RLG ++ A +F + K +
Sbjct: 155 ENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTI 214
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
+W+ ++ G + G + A FR M + ++ + SVL C+ L +L GK +H +
Sbjct: 215 FSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFY 274
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
K GF + +LI+MY KCG ID+G LF M ERDV+SW+ +IVG +GRA EA
Sbjct: 275 ADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEA 334
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
I FQEM +++++PN ITF+G+LSAC HAGL+ E F SMK +Y +EP +EHY C+V+
Sbjct: 335 IELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVN 394
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG +G D A +LI +MP KPD IW S+L +C +H+N ++ I E LL P D
Sbjct: 395 LLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGN 454
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEVSS 668
YV+LSN+YA LG WD +S++RK + K +K G S IEV +
Sbjct: 455 YVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDN 496
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 193/438 (44%), Gaps = 68/438 (15%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L++C +I + K +H I+K+ LSQ F ++ + A+ LF +A
Sbjct: 18 VPILKNCP---NIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVAD 74
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE----PNGFMYSAVLKACSLSGDLD 122
N + M+ AY NK AI +Y ML + E P+ F + V+K+C+ D
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LG+ +H + + + +TV+ N+L++MYVKC SL K+F++ + A + WN+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVS------WNT 188
Query: 181 MLSGGKQVHAFCVKRGF--EKEDVTL---TSLIDMYLKCGEIDDGLALFNFMP----ERD 231
++SG ++ R E +D T+ T+++ Y + G D L F M E D
Sbjct: 189 LISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPD 248
Query: 232 VVSWTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFD 271
+S ++ C + L +AL++MY+ C + E R+LFD
Sbjct: 249 EISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFD 308
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
Q + +V W++MI G + + EAI L + + + + TF L AC +
Sbjct: 309 QMNE------RDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAH 362
Query: 332 --LLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP 383
LLN GL + DY + L++L G + ALEL ++P
Sbjct: 363 AGLLN---------EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMP 413
Query: 384 -KKDVVAWSGLIMGCTKH 400
K D W L+ C H
Sbjct: 414 MKPDSAIWGSLLSSCRSH 431
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 136/320 (42%), Gaps = 45/320 (14%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
F LK C N++ ++H IV + + ++D+ + A LF R
Sbjct: 17 FVPILKNCPNIVELK-----KIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKR 71
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN-----QFIISSVLKVCSCLA 436
+ + ++ +I + + LA +++ M+ + N +F V+K C+ L
Sbjct: 72 VADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLM 131
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
GKQVH K G + + SL++MY+KC +DD +F+ M ERD VSW +I
Sbjct: 132 CYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLIS 191
Query: 497 G---CGQNGRAK----------------------------EAIAYFQEMIQSRLKPNEIT 525
G GQ RA+ +A+ +F+ M ++P+EI+
Sbjct: 192 GHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEIS 251
Query: 526 FLGVLSACRHAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
+ VL AC G +E W F + K G ++ ++++ + G D+ +L +
Sbjct: 252 LVSVLPACAQLGALELGKWIHFYADKA--GFLRNICVCNALIEMYAKCGSIDEGRRLFDQ 309
Query: 585 MPFKPDKTIWASMLKACETH 604
M + D W++M+ H
Sbjct: 310 MNER-DVISWSTMIVGLANH 328
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 64/331 (19%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK +H + K+G + N+L+ MY SL+DAHK+F+EM ++ VSW T+++ +
Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVR 195
Query: 82 NKRPNWAIRLYNHM------------------------------LEYGSVEPNGFMYSAV 111
+ A ++ M ++ +EP+ +V
Sbjct: 196 LGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSV 255
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAA 169
L AC+ G L+LG+ IH + + + N L++MY KCGS+ R+LFDQ +
Sbjct: 256 LPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNE--- 312
Query: 170 SAYGNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDG 220
+V W++M+ G G+ A + K E +T L+ G +++G
Sbjct: 313 ---RDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEG 369
Query: 221 LALFNFMPERDVVSWTGI-IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
L F M +RD G+ GC LV++ L +A +L + S
Sbjct: 370 LRYFESM-KRDYNIEPGVEHYGC----------LVNLLGLSGRLDQALELIKKMPMKPDS 418
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
A+W S++S + E A+ + H+
Sbjct: 419 -----AIWGSLLSSCRSHSNLEIAVIAMEHL 444
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C Q +++ GK +H K G ++I N L+ MYA S+++ +LFD+M
Sbjct: 252 LVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMN 311
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++SW+TM+ ++ R + AI L+ M + +EPN + +L AC+ +G L+ G
Sbjct: 312 ERDVISWSTMIVGLANHGRAHEAIELFQEM-QKAKIEPNIITFVGLLSACAHAGLLNEGL 370
Query: 126 LIHERITRE 134
E + R+
Sbjct: 371 RYFESMKRD 379
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/722 (26%), Positives = 331/722 (45%), Gaps = 130/722 (18%)
Query: 37 DIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML 96
++ T N +L+ Y L+DA +LF M +++ SW T+++ Y +++ ++ + M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 97 EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS- 155
G PN F ++ +K+C G+ L + + + + D+ + L+DM+V+CG+
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 156 -LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKC 214
L +LF + + NSML G Y+K
Sbjct: 190 DLASRLFVRIKE------PTIFCRNSMLVG--------------------------YVKT 217
Query: 215 GEIDDGLALFNFMPERDVVS-----------------------------------WTGII 239
+D L LF+ MPERDVVS +T +
Sbjct: 218 YGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSL 277
Query: 240 VGCFECSC--------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
C S + SALV++Y+ C EA+ +F+
Sbjct: 278 TACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHD---- 333
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
NVA W +I+G++ + E++ L + + + M +D + + + C + ++
Sbjct: 334 -RNNVA-WTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLC--L 389
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
Q+H L + SG +V ++LI +YA+ N++SA +F + +KD+V+W+ +I ++
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQ 449
Query: 400 HGLNSLAYLLFRDMINSN------------------------------QDVNQFIIS--S 427
G + A F M N +DV ++ +
Sbjct: 450 VGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVT 509
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+ K C+ L + + G Q+ VK G + ++I MY KCG I + +F F+ +D
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
+VSW +I G Q+G K+AI F ++++ KP+ I+++ VLS C H+GLV+E + F
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFD 629
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
MK + + P LEH+ CMVDLLG+AG +A+ LI EMP KP +W ++L AC+ H N
Sbjct: 630 MMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNN 689
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
+L + A+ + D Y++++ +YA G D +++RK + G KK G SW+EV
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEV 749
Query: 667 SS 668
++
Sbjct: 750 NN 751
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/611 (25%), Positives = 259/611 (42%), Gaps = 124/611 (20%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIF---------------------------- 39
+ALR CG R ++ ++LH R++ GL+ +F
Sbjct: 9 DALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAH 68
Query: 40 ----TGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
T N +L+ Y L+DA +LF M +++ SW T+++ Y +++ ++ + M
Sbjct: 69 PNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSM 128
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G PN F ++ +K+C G+ L + + + + D+ + L+DM+V+CG+
Sbjct: 129 HRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGT 188
Query: 156 --LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLK 213
L +LF + + NSML G Y+K
Sbjct: 189 VDLASRLFVRIKE------PTIFCRNSMLVG--------------------------YVK 216
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
+D L LF+ MPERDVVSW
Sbjct: 217 TYGVDHALELFDSMPERDVVSW-------------------------------------- 238
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
N M+S + + EA+ ++ + S G+ +DS T+TS+L AC L
Sbjct: 239 --------------NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ R+ Q+H ++ + +D V S L++LYA+ G K A +F+ L ++ VAW+ L
Sbjct: 285 SL--RWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I G +HG + + LF M ++QF +++++ C L G+Q+H+ C+K G
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + SLI MY KC + ++F+FM E+D+VSWT +I Q G +A +F
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M N IT+ +L A G E+ ++ M E + P Y + G
Sbjct: 463 MSTK----NVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG 518
Query: 574 CFDDAEQLIAE 584
+Q+I
Sbjct: 519 ANKLGDQIIGR 529
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 195/444 (43%), Gaps = 53/444 (11%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +L C + S++ GK LH ++I+ D + + L+ +YA +A +
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ + +N V+WT ++ + + ++ L+N M + + F + ++ C D
Sbjct: 328 FNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM-RAELMTLDQFALATLISGCCSRMD 386
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L LGR +H + V+ N+L+ MY KC +L +F ++ N ++ W
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIF-RFMN-----EKDIVSW 440
Query: 179 NSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFM-PERDV 232
SM++ QV R F K +T +++ Y++ G +DGL ++N M E+DV
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 233 ----VSWTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARK 268
V++ + GC + L +A++ MYS C + EARK
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+FD + ++ WN+MI+GY + ++AI + I G D ++ + L
Sbjct: 561 VFDFLN------VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 329 CIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
C + + S F + ++ G E S ++DL R G++ A +L +P K
Sbjct: 615 CSHSGLVQEGKSYFDMMKRVHNISPGLEH----FSCMVDLLGRAGHLTEAKDLIDEMPMK 670
Query: 386 DVV-AWSGLIMGCTKHGLNSLAYL 408
W L+ C HG N LA L
Sbjct: 671 PTAEVWGALLSACKIHGNNELAEL 694
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 63/340 (18%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA---------------------DF 51
C R + G+ LH +K G Q + N+L+SMYA +
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 52 TSLNDAH----------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
TS+ AH + FD M+ KN+++W M+ AY + +R+YN ML V
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
P+ Y + K C+ G LG I R + L DT + N ++ MY KCG + RK
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 160 LFDQYSNWAASAYGNVALWNSMLSG------GKQ-VHAF--CVKRGFEKEDVTLTSLIDM 210
+FD + ++ WN+M++G GKQ + F +KRG + + ++ +++
Sbjct: 561 VFDFLN------VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
G + +G + F+ M +S G SC +VD+ L EA+ L
Sbjct: 615 CSHSGLVQEGKSYFDMMKRVHNIS-----PGLEHFSC-----MVDLLGRAGHLTEAKDLI 664
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
D+ + +W +++S ++ NE A H+
Sbjct: 665 DEMPMKPTA-----EVWGALLSACKIHGNNELAELAAKHV 699
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 239/427 (55%), Gaps = 10/427 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
FE L+ +++MY+ C L EA+ LFD+ + ++ W +ISGY + Q E
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT------KDMVSWTVLISGYSQSGQASE 189
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + G + +T +S LKA + Q+H + GY+++ VGS+L
Sbjct: 190 ALALFPKMLHLGFQPNEFTLSSLLKASGT--GPSDHHGRQLHAFSLKYGYDMNVHVGSSL 247
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YAR +++ A +F+ L K+VV+W+ LI G + G LF M+ +
Sbjct: 248 LDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTH 307
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F SSV C+ SL +GK VHA +K G + +LIDMY K G I D +F+
Sbjct: 308 FTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRR 367
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ ++D+VSW II G Q+G EA+ F++M++++++PNEITFL VL+AC H+GL++E
Sbjct: 368 LVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG 427
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK ++ +E + H+ +VDLLG+AG ++A + I EMP KP +W ++L +C
Sbjct: 428 QYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCR 486
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N L AEQ+ P D +V+LSN+YA+ G +KVRK K+ G KK
Sbjct: 487 MHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPAC 546
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 547 SWVEIEN 553
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 160/316 (50%), Gaps = 7/316 (2%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
++ L C L A+ H I +S +E D ++ + ++++YA+ G+++ A +LF +
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAH--IQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDK 165
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P KD+V+W+ LI G ++ G S A LF M++ N+F +SS+LK S G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+HAF +K G++ +SL+DMY + + + +F + ++VVSW +I G +
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLE 560
G + + F +M++ +P T+ V +AC +G +E+ W +K G +P
Sbjct: 286 GEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS--GGQPIAY 343
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
++D+ ++G DA+++ + K D W S++ H + EQ+L
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402
Query: 621 SPEDPSKYVMLSNVYA 636
+ P++ LS + A
Sbjct: 403 KVQ-PNEITFLSVLTA 417
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 178/440 (40%), Gaps = 112/440 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C R +KQG+++H I D+ N +L+MYA SL +A LFD+M K++
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDM 171
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT +++ Y+ + + + A+ L+ ML G +PN F S++LKA GR +H
Sbjct: 172 VSWTVLISGYSQSGQASEALALFPKMLHLG-FQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + + + ++LLDMY + + R+ +++ AA NV WN++++G
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHM-REAKVIFNSLAAK---NVVSWNALIAGHARKG 286
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
GK VHA +K G +
Sbjct: 287 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 346
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LIDMY K G I D +F + ++D+VSW II G Y+ + E
Sbjct: 347 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG---------------YAQHGLGAE 391
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A +LF+Q M+ V + NE TF S
Sbjct: 392 ALQLFEQ-----------------MLKAKV--QPNE------------------ITFLSV 414
Query: 326 LKACIN--LLNFNSRF--ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
L AC + LL+ + ++ H + + + ++DL R G + A +
Sbjct: 415 LTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV------TVVDLLGRAGRLNEANKFIEE 468
Query: 382 LPKKDVVA-WSGLIMGCTKH 400
+P K A W L+ C H
Sbjct: 469 MPIKPTAAVWGALLGSCRMH 488
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 244/455 (53%), Gaps = 64/455 (14%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS------ 319
AR +F Q N WN+++ +L E N+E + + + S M D
Sbjct: 71 ARAVFRQMPE------PNCFCWNTILR--ILAETNDEHLQSEALMLFSAMLCDGRVKPNR 122
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA------------ 367
+TF S LKAC R Q+HGLIV G+ D V SNL+ +Y
Sbjct: 123 FTFPSVLKACARASRL--REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180
Query: 368 -----------------------------------RLGNVKSALELFHRLPKKDVVAWSG 392
RLG++KSA LF +P + VV+W+
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNV 240
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I G ++G A LF++M +SN D N + SVL + + +L GK +H + K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E +D+ ++L+DMY KCG ID L +F+ +P+R+ ++W+ II +GRA++AI +F
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 513 EMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQA 572
M ++ + PN++ ++G+LSAC HAGLVEE + F+ M GL+P +EHY CMVDLLG+A
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
G ++AE+LI MP +PD IW ++L AC+ H N K+ +AE L+ +P D YV LS
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALS 480
Query: 633 NVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
N+YA+LG W+++++VR K + K G SWIE+
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEI 515
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 200/509 (39%), Gaps = 111/509 (21%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LNDAHKLFDEMARKNIV 70
C R +KQ LH IK G QD T ++ A F+S ++ A +F +M N
Sbjct: 29 CKTPRDLKQ---LHAIFIKTGQIQDPLTAAEVIKFCA-FSSRDIDYARAVFRQMPEPNCF 84
Query: 71 SWTTM--VTAYTSNKR-PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
W T+ + A T+++ + A+ L++ ML G V+PN F + +VLKAC+ + L G+ I
Sbjct: 85 CWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQI 144
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY--------------- 172
H I + D +++ L+ MYV C + D YS + +
Sbjct: 145 HGLIVKFGFHEDEFVISNLVRMYVMCAVME----DAYSLFCKNVVDFDGSCQMELDKRKQ 200
Query: 173 -GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
GNV LWN M+ G ++ G+I LF+ MP R
Sbjct: 201 DGNVVLWNIMIDG--------------------------QVRLGDIKSAKNLFDEMPPRS 234
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
VVSW +I G
Sbjct: 235 VVSWNVMISG-------------------------------------------------- 244
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
Y N EAI L + SS + + T S L A + +H +
Sbjct: 245 --YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGAL--ELGKWIHLYAGKNK 300
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR 411
E+D ++GS L+D+Y++ G++ AL++F LPK++ + WS +I HG A + F
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 412 DMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKC 470
M + N +L CS + G+ + VK G + ++D+ +
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 471 GEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
G +++ L + MP E D V W ++ C
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGAC 449
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 63/275 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + +++GK +H I+K+G +D F +NL+ MY + DA+
Sbjct: 129 LKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 59 ------------------------------------KLFDEMARKNIVSWTTMVTAYTSN 82
LFDEM +++VSW M++ Y N
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQN 248
Query: 83 KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVL 142
AI L+ M + +++PN +VL A + G L+LG+ IH + K+E D VL
Sbjct: 249 GHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307
Query: 143 MNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA----------FC 192
+ L+DMY KCGS+ + L + N W++++ G +H
Sbjct: 308 GSALVDMYSKCGSIDKAL----QVFETLPKRNAITWSAII-GAFAMHGRAEDAIIHFHLM 362
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
K G DV ++ G +++G + F+ M
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM 397
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L + +++ GK +H K + D G+ L+ MY+ S++ A ++F+ +
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLP 332
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++N ++W+ ++ A+ + R AI ++ H++ V PN Y +L ACS +G ++ GR
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAI-IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 206/715 (28%), Positives = 326/715 (45%), Gaps = 117/715 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V+ L C + SI Q LH + +K GL+ D F L +YA + SL AHKLF+E
Sbjct: 7 LVKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEE-- 61
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
T T Y W L ++ LE VE + +
Sbjct: 62 -------TPCKTVYL------WNALLRSYFLEGKWVETLSLFH----------------Q 92
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ + +T E+ + TV + C L + L G
Sbjct: 93 MNADAVTEERPDNYTVSI-----ALKSCSGLQK-----------------------LELG 124
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG---- 241
K +H F +K+ + + ++LI++Y KCG+++D + +F P+ DVV WT II G
Sbjct: 125 KMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQN 183
Query: 242 --------------------------------CFECSCFTLS----ALVDMYSNCNVLCE 265
C + S F L V LC
Sbjct: 184 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 243
Query: 266 ARKLFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
A + + Y + Y ++ W+SM++ Y N A+ L + + +
Sbjct: 244 ANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRI 303
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
++ T SAL+AC + N Q+H L V G+ELD V + L+D+Y + + ++A
Sbjct: 304 ELNRVTVISALRACASSSNLEE--GKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENA 361
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ELF+R+PKKDVV+W+ L G + G+ + +F +M+++ + + +L S L
Sbjct: 362 IELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSEL 421
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
+++ +HAF K GF+ + SLI++Y KC ID+ +FK + DVV+W+ II
Sbjct: 422 GIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSII 481
Query: 496 VGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
G +G+ +EA+ +M S +KPN++TF+ +LSAC HAGL+EE +F M EY
Sbjct: 482 AAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQ 541
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
L P++EHY MVDLLG+ G D A +I MP + +W ++L AC H N K+ + A
Sbjct: 542 LMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAA 601
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
L P Y +LSN+Y W +K+R K+ KK G S +E+ +
Sbjct: 602 LNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKN 656
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 100/189 (52%), Gaps = 5/189 (2%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V+ L + ++Q LH + K G + F G +L+ +YA +S+++A+K+F
Sbjct: 407 DAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVF 466
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ ++V+W++++ AY + + A++L + M + V+PN + ++L ACS +G +
Sbjct: 467 KGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLI 526
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ G ++ H + +L + ++D+ + G L + L D +N A +V W +
Sbjct: 527 EEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKAL-DMINNMPMQAGPHV--WGA 583
Query: 181 MLSGGKQVH 189
+L G ++H
Sbjct: 584 LL-GACRIH 591
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 214/687 (31%), Positives = 317/687 (46%), Gaps = 101/687 (14%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA-------------- 49
R +V AL C + G+ +HCR++K GL + + N++L+MYA
Sbjct: 42 RALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 50 ----DFTSLN-------------DAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
D S N DA KLFD M ++ VS+TT++ Y N + + A+ L+
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M G + N + V+ ACS G + R++ + KLE + LL MY
Sbjct: 162 REMRNLG-IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 153 CGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
C L RKLFD+ N+ WN ML+G
Sbjct: 221 CLCLKDARKLFDEMPE------RNLVTWNVMLNG-------------------------- 248
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN---CNVLCEAR 267
Y K G I+ LF+ + E+D+VSW +I GC + L + Y+ C +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKN--QLDEALVYYTEMLRCGMKPSEV 306
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+ D S+ A S + L + G ++ D Y F A
Sbjct: 307 MMVDLLSASARSVGSSKGL---QLHGTIVKRG-----------------FDCYDFLQATI 346
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKD 386
++ + + ALQ V D+I N LI + + G V+ A E+F + KD
Sbjct: 347 IHFYAVSNDIKLALQQFEASVK-----DHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVH 445
+ +W+ +I G + LA LFR+MI+S+Q + + SV S L SL GK+ H
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF---KFMPERDVVSWTGIIVGCGQNG 502
+ D ++IDMY KCG I+ L +F K + + W II G +G
Sbjct: 462 DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 521
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
AK A+ + ++ +KPN ITF+GVLSAC HAGLVE T F SMK ++G+EP ++HY
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP 622
CMVDLLG+AG ++A+++I +MP K D IW +L A TH N ++ + A +L A P
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDP 641
Query: 623 EDPSKYVMLSNVYATLGMWDSLSKVRK 649
VMLSNVYA G W+ ++ VR+
Sbjct: 642 SHGGCKVMLSNVYADAGRWEDVALVRE 668
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 208/769 (27%), Positives = 350/769 (45%), Gaps = 128/769 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V + C + +GKS H RII+ G +F GN+L++MY S++ A +F++M
Sbjct: 231 FVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMR 290
Query: 66 RKNIVS---WTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++++S WT ++ A+ N A L+ M + V PN + VL+AC+ +
Sbjct: 291 LRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKM-DLEGVLPNKVTFVTVLRACTTLAQCE 349
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSN-----------WAA 169
I R+ LE DT L + + K G L R +F+ + WA
Sbjct: 350 K---IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAY 406
Query: 170 SAYGNVA----LWNSM---------------------LSGGKQVHAFCVKRGFEKEDVTL 204
+ G + L+ M L +Q+HA V GFE + V
Sbjct: 407 AQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQ 466
Query: 205 TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-----GCFECS------------- 246
L+ MY KCG +D ++F + ER VV+W ++ GC+E S
Sbjct: 467 VCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTK 526
Query: 247 ------------CFTLS-------------------ALVDMYSNCNVLCEARKLFDQYSS 275
C ++S A V Y+ C L EA+ FD
Sbjct: 527 PDKITYLAVLDACQSVSEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQ- 585
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
W N WN+MISG + ++++A+ + G+ +S T+ ++L+AC +L +
Sbjct: 586 WK----NNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDL 641
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNL----IDLYARLGNVKSALELFHRLPKKDVVAWS 391
Q+H I+ L+ I +NL I++Y + G++ A++ F ++P++DV++W+
Sbjct: 642 TR--GRQLHARIL-----LENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWN 694
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I +HG A F+ M ++ + C + SL GK +H+
Sbjct: 695 TMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATA 754
Query: 452 G--FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
E++ T+L+ MY +CG + D ++F R++V+W+ +I C Q+GR EA+
Sbjct: 755 APCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALD 814
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW-TIFTSMKPEYGLEPHLEHYYCMVDL 568
F+EM KP+ +TF +++AC G+V++ IF ++ Y + EHY CMV++
Sbjct: 815 LFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEV 874
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK---LVSIIAEQLLATSPEDP 625
LG+AG ++AE LI MP K IW ++L AC + + + A+QL DP
Sbjct: 875 LGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQL------DP 928
Query: 626 SKY----VMLSNVYATLGMWDSLSKVRKA--GKKLGEKKAGMSWIEVSS 668
+ ML+ +Y G W+ ++VRKA + + G SWIEV++
Sbjct: 929 GSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNN 977
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/618 (25%), Positives = 285/618 (46%), Gaps = 52/618 (8%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
R L+ C +++S GK +H I+ G + + N+L+ MYA L DA ++F+ +
Sbjct: 28 RYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELL 87
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
N+ SWT ++TAY + + M + +P+ F++S VL ACS +G L+ G
Sbjct: 88 PCPNVFSWTALITAYAKEGHLREVLGFFRKM-QLDGTKPDAFVFSTVLTACSSAGALNEG 146
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
+ IH+ + +E V+ N ++++Y KCG + + +F++ N+ WN+++
Sbjct: 147 KAIHDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPER------NLVSWNALI 199
Query: 183 SGGKQVHAFC-----------VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+ Q + C + D T S++D C + D +P R
Sbjct: 200 AANAQ-NGHCKDAMQVFQLMDLDGSVRPNDATFVSVVD---ACSNLLD-------LP-RG 247
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
+ II F+ F ++LV+MY C + AR +F++ +V W +I
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMR---LRDVLSVYSWTVII 304
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
+ + N EA L + G+ + TF + L+AC L FA H G
Sbjct: 305 AAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKH-----LG 359
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRL-PKKDVVAWSGLIMGCTKHGLNSLAYLLF 410
ELD +G+ + +A+LG++ +A ++F L ++VV+W+ +I + G A+ L+
Sbjct: 360 LELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLY 419
Query: 411 RDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKC 470
+ M + + N +V+ C L R +Q+HA V GFE + + L+ MY KC
Sbjct: 420 KRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKC 476
Query: 471 GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVL 530
G +D ++F+ + ER VV+W ++ NG + ++ ++ M+ KP++IT+L VL
Sbjct: 477 GSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVL 536
Query: 531 SACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD 590
AC+ V EA + + LE + V + G +A+ + +K +
Sbjct: 537 DACQS---VSEARRYAAT----FELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNN 589
Query: 591 KTIWASMLKACETHNNTK 608
W +M+ H +K
Sbjct: 590 AVTWNAMISGLAQHGESK 607
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
S++ + +S+L+ C+ S GK VH + G LI MY KCG + D
Sbjct: 20 SSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQD 79
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+ +F+ +P +V SWT +I + G +E + +F++M KP+ F VL+AC
Sbjct: 80 AVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSS 139
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AG + E I + G+E + +V+L G+ G +A+ + +P + + W
Sbjct: 140 AGALNEGKAIHDCVVLA-GMETQVVG-NAIVNLYGKCGRVHEAKAVFERLPER-NLVSWN 196
Query: 596 SMLKACETHNNTK 608
+++ A + + K
Sbjct: 197 ALIAANAQNGHCK 209
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 311/656 (47%), Gaps = 93/656 (14%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P+ + A+L+ CS + ++D GR +H + E + ++ L+ MY +CGS+ ++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 160 LFD---------------------------------QYSNWAASAYGNVALWNS-----M 181
+F+ Q + + VA+ N+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L G ++H +++GFE + T+LI+MY KCG + F + RDVVSWT +I
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 242 CFECSCF--------------------TLSALVDMYSNCNVLCEARKLFDQYSSW----- 276
C + F TL + + Y + N L E + ++ SS
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 277 ------AASAYGNVAL------------------WNSMISGYVLNEQNEEAITLLSHIHS 312
A + +GN L WN +I+ YV NE EA+ L +
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ + TF L +L + +H L+ +GY+ D +V + L+ LY R
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAK--GKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A ++F + KDV+ W+ + + ++G A LF++M + + +VL C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LA+L++G+Q+H+ ++ F E + T+LI+MY KCG++ + +++F+ M +RD++ W
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWN 478
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ Q+G E + F +M +K + ++F+ VLSA H+G V + + F +M +
Sbjct: 479 SMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 538
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF-KPDKTIWASMLKACETHNNTKLVS 611
+ + P E Y C+VDLLG+AG +A ++ ++ PD +W ++L AC THN T
Sbjct: 539 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 598
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
AEQ+L P YV+LSNVYA G WD ++++RK + G KK G S IE+
Sbjct: 599 AAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEI 654
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 319/650 (49%), Gaps = 120/650 (18%)
Query: 123 LGRLIHERI-TREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------QYSNWAASAY- 172
LGR +H R+ E L+ D ++ N+LL MY KCG + R++FD +W A A+
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 173 --------GNVALWNSML-------------------------SGGKQVHAFCVKRGFEK 199
+ L ML S G V F +K GF
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180
Query: 200 EDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV-----GC----------- 242
DV++ +LIDM+ + G++ +FN + ER VV WT +I GC
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 243 ----FECSCFTLSA-----------------------------------LVDMYSNCNV- 262
FE +T+S+ LVDMY+ +
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300
Query: 263 --LCEARKLFDQYSSWAASAYGNVALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCIDS 319
+ ARK+F + + NV W ++ISGYV Q A+ LL + + + +
Sbjct: 301 QSMECARKVFKRMPTH------NVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNH 354
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
T++S LKAC NL + +S Q+H ++ + +VG+ L+ +YA G ++ A + F
Sbjct: 355 LTYSSLLKACANLSDQDS--GRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAF 412
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS-NQDVNQFIISSVLKVCSCLASL 438
+L ++++++ S I G + + I S + V+ F +S+L + +
Sbjct: 413 DQLYERNLLSTSSDI------GETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLP 466
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE-RDVVSWTGIIVG 497
+G+Q+HA +K GFE + SL+ MY +CG +DD F M + +V+SWT II
Sbjct: 467 TKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISA 526
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
++G A+ A++ F +MI S +KPN++T++ VLSAC H GLV+E F SM+ ++ L P
Sbjct: 527 LAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIP 586
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+EHY CMVDLL ++G +A + I EMP K D +W ++L AC T+ N ++ I A +
Sbjct: 587 RMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHV 646
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ P+DP+ YV+LSN+YA G+WD ++++R + K+ G+SW+ V
Sbjct: 647 IDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHV 696
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 195/465 (41%), Gaps = 108/465 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF---TSLNDAHKLFDEMARKNI 69
C ++ S G+ LH +++ GL D L+ MY S+ A K+F M N+
Sbjct: 259 CAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNV 318
Query: 70 VSWTTMVTAYTS-NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SWT +++ Y + N A+ L ML S+EPN YS++LKAC+ D D GR IH
Sbjct: 319 MSWTALISGYVQCGGQENNAVELLCEMLNE-SIEPNHLTYSSLLKACANLSDQDSGRQIH 377
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY---------SNWAASAYGNVAL 177
R+ + + V+ N L+ MY + G + RK FDQ S+ + N A
Sbjct: 378 ARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSN-AS 436
Query: 178 WNSML-------------------------SGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
W+S + + G+Q+HA +K GFE + SL+ MY
Sbjct: 437 WSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYS 496
Query: 213 KCGEIDDGLALFNFMP-ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+CG +DD F+ M + +V+SWT II SAL
Sbjct: 497 RCGYLDDACRAFDEMEDDHNVISWTSII-----------SAL------------------ 527
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC-- 329
+ +G+ E A++L + SG+ + T+ + L AC
Sbjct: 528 -------AKHGHA----------------ERALSLFHDMILSGVKPNDVTYIAVLSACSH 564
Query: 330 INLLNFNSRFALQV---HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KK 385
+ L+ + + H LI + + ++DL AR G V+ ALE + +P K
Sbjct: 565 VGLVKEGKEYFRSMQKDHRLIPRMEHY------ACMVDLLARSGLVQEALEFINEMPCKA 618
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVL 429
D + W L+ C + + + R +I+ QD +++ S L
Sbjct: 619 DALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNL 663
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C G+ +H R++K + GN L+SMYA+ + +A K FD++ +N+
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNL 420
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+S T+ T +W+ + +E V + F ++++L A + G G+ +H
Sbjct: 421 LS-TSSDIGETGRSNASWSSQ-----IESMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-GK 186
+ E D + N+L+ MY +CG L + FD+ + NV W S++S K
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMED-----DHNVISWTSIISALAK 529
Query: 187 QVHAF--------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
HA + G + DVT +++ G + +G F M
Sbjct: 530 HGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSM 578
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 244/434 (56%), Gaps = 11/434 (2%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T +I C+ S + + L+ +Y+ C+ L +AR +FD+ NV W +MIS Y
Sbjct: 86 THMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR------NVVSWTAMISAYS 139
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
EA+ L + S + +TF + L +C L F + Q+H + + YE
Sbjct: 140 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET--GRQIHSIAIKRNYESH 197
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
VGS+L+D+YA+ G + A +FH LP++DVVA + +I G + GL+ A LFR +
Sbjct: 198 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQI 257
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ N +SVL S LA+L GKQVH+ ++ G + L SLIDMY KCG +
Sbjct: 258 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCY 317
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACR 534
+F MPER +SW ++VG ++G A+E + F+ M ++++KP+ IT+L VLS C
Sbjct: 318 ARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 377
Query: 535 HAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
H L + IF +M + G+EP + HY C+VDLLG+AG ++A I +MPF P I
Sbjct: 378 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAI 437
Query: 594 WASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGK 652
W S+L +C H++ ++ I+ ++LL PE+ YV+LSN+YA+ G W+ + +R +
Sbjct: 438 WGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQE 497
Query: 653 KLGEKKAGMSWIEV 666
K K+ G SW+E+
Sbjct: 498 KAVTKEPGRSWVEL 511
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 174/439 (39%), Gaps = 107/439 (24%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C +R+I++G+ +H +IK ++ L+ +Y L DA +FDEM ++N+
Sbjct: 69 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNV 128
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++AY+ A+ L+ ML EPN F ++ +L +C S + GR IH
Sbjct: 129 VSWTAMISAYSQRGFAFEALNLFVEMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHS 187
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--------------------------------- 156
+ E + ++LLDMY K G +
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247
Query: 157 TRKLFDQYS----NWAASAYGNVALWNSMLSG---GKQVHAFCVKRGFEKEDVTLTSLID 209
KLF Q N + Y +V S L+ GKQVH+ ++ G V L SLID
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG + +F+ MPER +SW ++VG YS + E +L
Sbjct: 308 MYSKCGNVCYARRIFDSMPERTCISWNAMLVG---------------YSKHGMAREVLEL 352
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
F ++ E+N+ + DS T+ + L C
Sbjct: 353 FK-----------------------LMREENK-------------VKPDSITYLAVLSGC 376
Query: 330 INLLNFNSRFALQVHGLIV-------TSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
S L+ GL + G E D ++DL R G V+ A + ++
Sbjct: 377 -------SHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 429
Query: 383 PKKDVVA-WSGLIMGCTKH 400
P A W L+ C H
Sbjct: 430 PFVPTAAIWGSLLGSCRVH 448
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 2/211 (0%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ S L C++ R +VH ++ + Y + + LI LY + + A +F
Sbjct: 65 YDSILNECVSQRAI--REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDE 122
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P+++VV+W+ +I ++ G A LF +M+ S+ + N F +++L C G
Sbjct: 123 MPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 182
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+H+ +KR +E +SL+DMY K G I D +F +PERDVV+ T II G Q
Sbjct: 183 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM 242
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
G +EA+ F+++ + N +T+ VL+A
Sbjct: 243 GLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 193/692 (27%), Positives = 316/692 (45%), Gaps = 100/692 (14%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS-------LNDAHKLFDEMARKNI 69
RS + +H + + GL D + + LL T+ L+ + +LF + N
Sbjct: 15 RSARHLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLPQPLHHSLQLFRLVRSPNA 74
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+ T++ A P+ LY M P+ + + + AC+ GD GR +H
Sbjct: 75 FTCNTLIRAALRQGLPHLCFPLYASM----PAAPDTYTHPLLAAACAARGDAREGRQVHS 130
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + L N L+ MY CG + R++FD W A + WN++L+
Sbjct: 131 HAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVS------WNTILA---- 180
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
Y++ G+++ + +F MPER + + ++ +
Sbjct: 181 ----------------------TYVRDGDVEQAVGVFARMPERSAAAVSSMV------AL 212
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F + +V+ EAR +FD + + + W +MIS + N+ EA+ +
Sbjct: 213 FARTGMVE---------EARGVFD------GAEHRDAFTWTAMISCFERNDLFVEALAVF 257
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--------------- 352
S + G +D S + AC + HGL+V +G
Sbjct: 258 SDMREEGWPVDEAVMVSVVAACAKSEVIQN--GEVCHGLVVRAGLGSRVNVQNALIHMYS 315
Query: 353 ----------------ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
LD+ +++I Y + G V+ A LF+ +P KD V+WS +I G
Sbjct: 316 SCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAG 375
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C ++ +S A +F +M ++ + SV+ C+ L +L +GK VH + + +
Sbjct: 376 CVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNIT 435
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ TSLIDMY+KCG ++ L +F + E+ W +IVG NG ++ F EM
Sbjct: 436 IVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMET 495
Query: 517 SRLK-PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
S + P+EITF GVLSACRH GLVEE F M+ +Y + P++ HY CMVDLLG+AG
Sbjct: 496 SGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYV 555
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+AE LI MP PD W ++L AC H+++++ + ++L+ P MLSN+Y
Sbjct: 556 REAEDLIQSMPMSPDVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIY 615
Query: 636 ATLGMWDSLSKVRKAGKKLGEKKAGMSWIEVS 667
A+ GMW + +R + K+ K AG S +E S
Sbjct: 616 ASEGMWQCVKDLRGSMKQHVAKVAGCSVVESS 647
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 36/261 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + C + I+ G+ H +++ GL + N L+ MY+ + A +LFD
Sbjct: 272 MVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSE 331
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV------------------------ 101
+ SW +M++ Y N R A L+N M + +V
Sbjct: 332 SLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDN 391
Query: 102 ------EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+P+ +V+ AC+ L+ G+L+HE I + + VL +L+DMY+KCG
Sbjct: 392 MRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGC 451
Query: 156 LTRKL--FDQYSNWAASAYGNVAL---WNSMLSGGKQVHAFCVKRGFE-KEDVTLTSLID 209
+ L FD + V + N +++ + + G ++T T ++
Sbjct: 452 MEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLS 511
Query: 210 MYLKCGEIDDGLALFNFMPER 230
G +++G F M +
Sbjct: 512 ACRHGGLVEEGRQFFKLMQNK 532
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 201/699 (28%), Positives = 316/699 (45%), Gaps = 110/699 (15%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
+++H +I G N L+ +Y + A KLFDE+ + ++++ TT++TAY++
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD----LDLGRLIH-ERITREKL 136
A ++N E + Y+A++ S D ++L R + +
Sbjct: 92 LGNLKMAREIFN---ETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDF 148
Query: 137 EYDTVLMNTLLDMY--VKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
+ +VL + L Y +CG Q+H VK
Sbjct: 149 TFASVLSASTLIFYDERQCG--------------------------------QMHGTVVK 176
Query: 195 RGFEKEDVTLTSLIDMYLKCGE---------IDDGLALFNFMPERDVVSWTGIIVGCFEC 245
G E L +L+ +Y+KC + LF+ MP+R+ WT +I G
Sbjct: 177 FGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITG---- 232
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y L AR++ D + A WN+MISGY+ + E+A+T
Sbjct: 233 -----------YVRNGDLTGAREILDTMTEQPGIA------WNAMISGYLHHGLFEDALT 275
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS--GYELDYI--VGSN 361
L + G+ +D T+TS + AC + F QVH I+ + + D++ VG+
Sbjct: 276 LFRKMRLLGVQVDESTYTSVISACADGGFF--LLGKQVHAYILKNELNPDRDFLLSVGNT 333
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGL---------------------------- 393
LI LY + G V A ++F+ +P KD++ W+ L
Sbjct: 334 LITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTW 393
Query: 394 ---IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
I G ++G A LF M + N + + + CS L +L G+Q+HA V
Sbjct: 394 TVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVH 453
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G + ++I MY +CG ++ +F MP D VSW +I GQ+G +AI
Sbjct: 454 LGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIEL 513
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+++M++ + P+ TFL VLSAC HAGLVEE F SM YG+ P +HY M+DL
Sbjct: 514 YEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFC 573
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG F DA+ +I MPF+ IW ++L C TH N L AE+L P+ YV+
Sbjct: 574 RAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVL 633
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
LSN+YA+LG W+ +++ RK + G KK SW EV +
Sbjct: 634 LSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVEN 672
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 206/514 (40%), Gaps = 97/514 (18%)
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
S S + VH + GF+ + LID+Y K + LF+ +P+ DV++ T +I
Sbjct: 27 SSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLI 86
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
YS L AR++F++ + +N+MI+GY
Sbjct: 87 TA---------------YSALGNLKMAREIFNE----TPLDMRDTVFYNAMITGYSHMND 127
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL----- 354
AI L + + D +TF S L A L+ ++ R Q+HG +V G E+
Sbjct: 128 GHSAIELFRAMRWANFQPDDFTFASVLSAS-TLIFYDERQCGQMHGTVVKFGIEIFPAVL 186
Query: 355 -----------------------------------DYIVGSNLIDLYARLGNVKSALELF 379
+ + + LI Y R G++ A E+
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ ++ +AW+ +I G HGL A LFR M V++ +SV+ C+
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFL 306
Query: 440 RGKQVHAFCVK------RGF-----------------------------EKEDITLTSLI 464
GKQVHA+ +K R F K+ IT +L+
Sbjct: 307 LGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLL 366
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
Y+ G +++ + F MPE+++++WT +I G QNG ++A+ F +M +PN+
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDY 426
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
F G ++AC G +E + + G + L M+ + + G + A +
Sbjct: 427 AFAGAITACSVLGALENGRQLHAQIV-HLGHDSTLSVGNAMITMYARCGIVEAARTMFLT 485
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
MPF D W SM+ A H + + EQ+L
Sbjct: 486 MPFV-DPVSWNSMIAALGQHGHGVKAIELYEQML 518
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 38/288 (13%)
Query: 20 KQGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
K GK R I Y + +DI T N LLS Y + + +A F +M KN+++WT M++
Sbjct: 340 KYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISG 399
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
N A++L+N M + EPN + ++ + ACS+ G L+ GR +H +I L +
Sbjct: 400 LAQNGFGEQALKLFNQM-KLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVH--LGH 456
Query: 139 DTVLM--NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-GKQVHAF-- 191
D+ L N ++ MY +CG + R +F + + WNSM++ G+ H
Sbjct: 457 DSTLSVGNAMITMYARCGIVEAARTMF------LTMPFVDPVSWNSMIAALGQHGHGVKA 510
Query: 192 ------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+K G + T +++ G +++G FN M E GI G
Sbjct: 511 IELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLEN-----YGIAPGEDH- 564
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ ++D++ +A+ + D A + +W ++++G
Sbjct: 565 ----YARMIDLFCRAGKFSDAKNVIDSMPFEARA-----PIWEALLAG 603
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 22/246 (8%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C +++ G+ LH +I+ G + GN +++MYA + A +F M +
Sbjct: 431 AITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVD 490
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLI 127
VSW +M+ A + AI LY ML+ G + P+ + VL ACS +G ++ G R
Sbjct: 491 PVSWNSMIAALGQHGHGVKAIELYEQMLKEG-ILPDRRTFLTVLSACSHAGLVEEGNRYF 549
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGG 185
+ + + ++D++ + G + + + D A + +W ++L+G
Sbjct: 550 NSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARA-----PIWEALLAGC 604
Query: 186 K-----QVHAFCVKRGFE---KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----- 232
+ + ++ F+ + D T L +MY G +D M +R V
Sbjct: 605 RTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPA 664
Query: 233 VSWTGI 238
SWT +
Sbjct: 665 CSWTEV 670
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 247/458 (53%), Gaps = 24/458 (5%)
Query: 210 MYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKL 269
MY KCG D + +F+ MP RD VSW ++ G F + +D R++
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSG------FLRNGDLDT---------GRQV 45
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC 329
FD+ NV W ++ISG NE E+++ L + + + T+ S+L AC
Sbjct: 46 FDEMLER------NVITWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTAC 99
Query: 330 INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
L Q+HGL+ G + + + S L+DLY++ G+++ A +F + D V+
Sbjct: 100 SGLQALEK--GRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVS 157
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ +++G T++G A F M+N +V+ ++S+VL C SL GKQ+H+ +
Sbjct: 158 MTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVI 217
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
KR LI+MY KCGE+ + + +F + R+ VSW +I ++G A+
Sbjct: 218 KRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALR 277
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
++EMIQ P ++TFL +L AC H GLV++ SM YG+ P EHY C+VD+L
Sbjct: 278 LYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDML 337
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG ++A+ LI + KPD IW ++L AC +T++ AEQLL P+ P+ YV
Sbjct: 338 GRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYV 397
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+L+N+Y++ G WD ++ K K++G K+ G+SWIE+
Sbjct: 398 LLANIYSSKGRWDERARTIKRMKEMGVAKETGISWIEI 435
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 186/460 (40%), Gaps = 91/460 (19%)
Query: 47 MYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGF 106
MY +DA K+FD+M ++ VSW TMV+ + N + ++++ MLE N
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLER-----NVI 55
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN 166
++A++ +++ ++ D++ L + ++CG + S+
Sbjct: 56 TWTAIISG----------------LSQNEMYEDSLG----LFVQMRCGLIEPNFLTYLSS 95
Query: 167 WAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
A + L G+Q+H K G + ++L+D+Y KCG ++D +F
Sbjct: 96 LTACS------GLQALEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFES 149
Query: 227 MPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
E D VS T I+VG
Sbjct: 150 AVELDEVSMTVILVG--------------------------------------------- 164
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL--QVH 344
+ N EEAI + + G +D ++ L AC ++ L Q+H
Sbjct: 165 -------FTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGAC----GVDTSLGLGKQIH 213
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
L++ + VG+ LI++Y++ G ++ ++++F+ L ++ V+W+ +I +HG
Sbjct: 214 SLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGF 273
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSL 463
A L+ +MI S+L CS + + +G K + + G +
Sbjct: 274 RALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACV 333
Query: 464 IDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+DM + G +++ +L + + + DV+ W ++ C G
Sbjct: 334 VDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRG 373
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 164/411 (39%), Gaps = 101/411 (24%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
++D + N ++S + L+ ++FDEM +N+++WT +++ + N+ ++ L+
Sbjct: 20 TRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQ 79
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M G +EPN Y + L ACS L+ GR IH + + ++ + + + L+D+Y KCG
Sbjct: 80 M-RCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCG 138
Query: 155 SL--TRKLF------DQYS---------------------------------NWAASAYG 173
SL R++F D+ S N ++ G
Sbjct: 139 SLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLG 198
Query: 174 NVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+ ++ L GKQ+H+ +KR LI+MY KCGE+ + + +FN + R+ V
Sbjct: 199 ACGV-DTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSV 257
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
SW +I F ++ + + L+ MI
Sbjct: 258 SWNSMIAA----------------------------FARH----GDGFRALRLYEEMI-- 283
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSG 351
G TF S L AC + L++ +F + + S
Sbjct: 284 ------------------QEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISP 325
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
Y + ++D+ R G + A L RL K DV+ W L+ C+ G
Sbjct: 326 RAEHY---ACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRG 373
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 25/253 (9%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L CG S+ GK +H +IK L + F GN L++MY+ L ++ K+
Sbjct: 188 VDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKV 247
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ + +N VSW +M+ A+ + A+RLY M++ G+V P + ++L ACS G
Sbjct: 248 FNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQEGAV-PTDLTFLSLLHACSHVGL 306
Query: 121 LDLGRLIHERITR-----EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYG 173
+D G + +T+ + E+ ++DM + G L + L ++ S
Sbjct: 307 VDKGMKFLKSMTKVYGISPRAEH----YACVVDMLGRAGLLNEAKSLIERL-----SIKP 357
Query: 174 NVALWNSMLS-----GGKQVHAFCVKRGF---EKEDVTLTSLIDMYLKCGEIDDGLALFN 225
+V +W ++L G ++ + ++ K+ L ++Y G D+
Sbjct: 358 DVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYSSKGRWDERARTIK 417
Query: 226 FMPERDVVSWTGI 238
M E V TGI
Sbjct: 418 RMKEMGVAKETGI 430
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 274/547 (50%), Gaps = 36/547 (6%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS 116
A ++FD + + ++ ++ AY+ + AI LY ML Y V PN + + VLKACS
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSML-YFRVPPNKYTFPFVLKACS 110
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSN-WAASAYGNV 175
DL GR IH L D + L+D+Y++C F +N +A +V
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR-----FGPAANVFAKMPMRDV 165
Query: 176 ALWNSMLSG----GKQVHAFCV------KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
WN+ML+G G HA + G TL SL+ + + G + G ++
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 226 FMPERDV-VSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
+ + + +++G +AL+DMY+ C L A ++F + N
Sbjct: 226 YCLRAYLDQNEEQVLIG---------TALLDMYAKCKHLVYACRVFHGMT------VRNE 270
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT-FTSALKACINLLNFNSRFALQV 343
W+++I G+VL ++ EA L + GMC S T SAL+ C +L + R Q+
Sbjct: 271 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADL--RMGTQL 328
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
H L+ SG D G++L+ +YA+ G + A LF + KD +++ L+ G ++G
Sbjct: 329 HALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKA 388
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A+L+F+ M N + + S++ CS LA+L+ G+ H + RG E SL
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSL 448
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
IDMY KCG ID +F MP RD+VSW +I G G +G KEA F M +P++
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+TF+ +++AC H+GLV E F +M +YG+ P +EHY CMVDLL + G D+A Q I
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568
Query: 584 EMPFKPD 590
MP K D
Sbjct: 569 SMPLKAD 575
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ ALR C ++ G LH + K G+ D+ GN+LLSMYA +N+A LFDE+A
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ +S+ +++ Y N + A ++ M + +V+P+ +++ ACS L GR
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKM-QACNVQPDIATMVSLIPACSHLAALQHGR 427
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLS 183
H + L +T + N+L+DMY KCG L+R++FD+ ++ WN+M++
Sbjct: 428 CSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR------DIVSWNTMIA 481
Query: 184 G------GKQVHAFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
G GK+ + +GFE +DVT LI G + +G F+ M +
Sbjct: 482 GYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHK 537
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 116/281 (41%), Gaps = 47/281 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQD---IFTGNNLLSMYADFTSLNDAHKLFD 62
+V L Q ++ QG S+H ++ L Q+ + G LL MYA L A ++F
Sbjct: 204 LVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFH 263
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +N V+W+ ++ + R A L+ ML G + ++ L+ C+ DL
Sbjct: 264 GMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLR 323
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNS 180
+G +H + + + D N+LL MY K G + LFD+ + +YG AL +
Sbjct: 324 MGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYG--ALLSG 381
Query: 181 MLSGGKQVHAFCV----------------------------------------KRGFEKE 200
+ GK AF V RG E
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
SLIDMY KCG ID +F+ MP RD+VSW +I G
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 182/481 (37%), Gaps = 113/481 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + G+++H GL D+F L+ +Y A +F +M +++
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y ++ + AI M + G + PN ++L + G L G +H
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 130 RITREKLEY--DTVLMNT-LLDMYVKCGSLTR--KLFDQYS-----NWAASAYGNVA--- 176
R L+ + VL+ T LLDMY KC L ++F + W+A G V
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 177 ------LWNSM-------------------------LSGGKQVHAFCVKRGFEKEDVTLT 205
L+ M L G Q+HA K G +
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE--------------------- 244
SL+ MY K G I++ LF+ + +D +S+ ++ G +
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405
Query: 245 ---------CSCFTLSAL-------------------------VDMYSNCNVLCEARKLF 270
+C L+AL +DMY+ C + +R++F
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
D+ + ++ WN+MI+GY ++ +EA TL + + G D TF + AC
Sbjct: 466 DKMPAR------DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACS 519
Query: 331 N---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKD 386
+ + F H + E YI ++DL AR G + A + +P K D
Sbjct: 520 HSGLVTEGKHWFDTMTHKYGILPRME-HYIC---MVDLLARGGFLDEAYQFIQSMPLKAD 575
Query: 387 V 387
V
Sbjct: 576 V 576
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G + A ++F R+P D A++ LI + G A L+R M+ N++ VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
K CS LA L G+ +HA G + T+LID+Y++C +F MP RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSR--LKPNEITFLGVLS 531
+W ++ G +G AIA+ +M Q R L+PN T + +L
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDM-QDRGGLRPNASTLVSLLP 209
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V + C +++ G+ H +I GL+ + N+L+ MYA ++ + ++F
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M ++IVSW TM+ Y + A L+ M G EP+ + ++ ACS SG +
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG-FEPDDVTFICLIAACSHSGLV 524
Query: 122 DLGR 125
G+
Sbjct: 525 TEGK 528
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++ ++ G++ +F +P D ++ +I G AI ++ M+ R+ PN+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
TF VL AC + TI + GL L ++DL + F A + A
Sbjct: 100 YTFPFVLKACSALADLCAGRTIH-AHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 584 EMPFKPDKTIWASMLKACETHN 605
+MP + D W +ML H
Sbjct: 159 KMPMR-DVVAWNAMLAGYANHG 179
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/650 (28%), Positives = 305/650 (46%), Gaps = 94/650 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---------- 157
Y A+L+ C G +H +++ L N LL M+V+ G L
Sbjct: 97 YIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMA 156
Query: 158 -RKLFD---QYSNWAASAYGNVAL-------WNSM-------------------LSGGKQ 187
R LF +A + Y + AL W + L+ G++
Sbjct: 157 ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGRE 216
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS- 246
VH ++ GFE + + +LI MY+KCG+I +F+ MP RD +SW +I G FE
Sbjct: 217 VHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDV 276
Query: 247 CFT----------------LSALVDMYSNCNVLCEAR----------------------K 268
C L + + S C L + R
Sbjct: 277 CLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNS 336
Query: 269 LFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L +SS ++ + ++ W +MISGY N E+A+ + + G+ D
Sbjct: 337 LIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPD 396
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T S L AC L + + +H +G IV ++LID+Y++ + ALE+
Sbjct: 397 EITIASVLSACAGLGLLDK--GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
FHR+P K+V++W+ +I+G + + A F+ MI S + N + SVL C+ + +L
Sbjct: 455 FHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKP-NSVTLVSVLSACARIGAL 513
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
GK++HA ++ G + +L+DMY++CG ++ F E+DV SW ++ G
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGY 572
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q G+ A+ F +MI+S + P+EITF +L AC +G+V + F SM+ ++ + P+
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPN 632
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
L+HY +VDLLG+AG +DA + I +MP PD IW ++L AC + N +L + A+ +
Sbjct: 633 LKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIF 692
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ Y++L N+YA G WD +++VRK ++ G SW+EV+
Sbjct: 693 EMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVA 742
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 172/448 (38%), Gaps = 119/448 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + + C + G+ +H +IK G ++ N+L+ M++ ++A +F
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF 354
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M K++VSWT M++ Y N P A+ Y ++E+ V P+ ++VL AC+ G L
Sbjct: 355 SKMEFKDLVSWTAMISGYEKNGLPEKAVETYT-IMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWN 179
D G ++HE R L ++ N+L+DMY KC + + L F + N NV W
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN------KNVISWT 467
Query: 180 SMLSG-------------------------------------------GKQVHAFCVKRG 196
S++ G GK++HA ++ G
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ +L+DMY++CG ++ FN E+DV SW ++ G
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTG--------------- 571
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+A G + A+ L + S +
Sbjct: 572 -------------------YAQQGKGGL------------------AVELFHKMIESDVN 594
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLG 370
D TFTS L AC SR + GL E + + NL +DL R G
Sbjct: 595 PDEITFTSLLCAC-------SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647
Query: 371 NVKSALELFHRLP-KKDVVAWSGLIMGC 397
++ A E ++P D W L+ C
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNAC 675
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 202/695 (29%), Positives = 339/695 (48%), Gaps = 64/695 (9%)
Query: 1 MDLRRIVEALRHCGQRRS--IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LND 56
M + +E LR RR+ + G++LH +K G + N+L++ Y+ L
Sbjct: 12 MSHTQFIELLR----RRASCPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAA 67
Query: 57 AHKLFDEM--ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
A +FD++ A +++ SW +++ S RP A+ + ML +V P+ ++A A
Sbjct: 68 AFAVFDDIPPAARDVASWNSLLNPL-SRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTA 126
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNT-LLDMYVKCG--SLTRKLFDQYSNWAASA 171
+ + G H + V + T LL+MY K G S R++FD
Sbjct: 127 AARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQR---- 182
Query: 172 YGNVALWNSMLSGGKQVHAFCVKRGF------------EKEDVTLTSL-----IDMYLKC 214
N W++M++G C + F EK + T++ + + L
Sbjct: 183 --NSFSWSTMVAG--YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM 238
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
GE GL + + + D VS ++LV MY+ + A +F+
Sbjct: 239 GEQMHGLIVKDGL--LDFVS--------------VENSLVTMYAKAGCMGAAFHVFE--- 279
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+S N W++MI+GY N + + A+++ S +H++G +TF L A +L
Sbjct: 280 ---SSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
Q HGL+V G+E+ V S L+D+YA+ G + A E F +L + D+V W+ ++
Sbjct: 337 LA--VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMV 394
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++G + A L+ M ++ I+S L+ C+ +A+L GKQ+H VK G
Sbjct: 395 SGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLG 454
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
++L MY KCG ++DG+++F+ +P+RDV++W II G QNG A+ F+EM
Sbjct: 455 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
P+ ITF+ +L AC H GLV+ W F+ M +YGL P L+HY CMVD+L +AG
Sbjct: 515 KMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGM 574
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+A+ I + +W +L AC + + + + E+L+ D S Y++LSN+
Sbjct: 575 LKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNI 634
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YA+ W+ + +VR + G K G SW+E++S
Sbjct: 635 YASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNS 669
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 296/573 (51%), Gaps = 48/573 (8%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA 168
S++L +C+ L GR +H I E +L+ L+ Y S L D +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY----SAFNLLVDAHVITE 159
Query: 169 ASAYGNVALWNSMLSGGKQVHAFC----------VKRGFEKEDVTLTSLIDMYLKCGE-I 217
S + WN ++S + + FC VK+G ++ T S++ CGE +
Sbjct: 160 NSNILHPFPWNLLISSYVR-NGFCQKALSAYKQMVKKGIRPDNFTYPSVLK---ACGEEL 215
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
D G ++V S +Y++ + EA +LF S WA
Sbjct: 216 DLGFG-------KEVHE----------------SINASLYASMGMWNEAFELFG--SMWA 250
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
N+ +WN++ GY+ + A+ LLS + G +DS L AC ++ ++
Sbjct: 251 EDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHI--GDA 308
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
+ ++H + S + V + LI +Y+R ++K A LF + K ++ W+ +I GC
Sbjct: 309 KLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGC 368
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ A L R+M+ + N I+SVL +C+ +A+L+ GK+ H + +R K+
Sbjct: 369 CHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDH 428
Query: 458 ITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ L +L+DMY + G++ + +F + ERD +++T +I G G G + A+ F+EM
Sbjct: 429 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 488
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
++KP+ IT + VLSAC H+GLV + +F M+ YGL PHLEH+ CM DL G+AG +
Sbjct: 489 FQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLN 548
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A+++I MP+KP +WA+++ AC H NT++ AE+LL PE+P YV+++N+YA
Sbjct: 549 KAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYA 608
Query: 637 TLGMWDSLSKVRKAGKKLGEKKA-GMSWIEVSS 668
G W+ L+KVR + LG +KA G +W++V +
Sbjct: 609 AAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGT 641
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 213/508 (41%), Gaps = 52/508 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L C +S+ +G+ LH II G Q L++ Y+ F L DAH + +
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 162
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ W ++++Y N A+ Y M++ G + P+ F Y +VLKAC DL G+
Sbjct: 163 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKG-IRPDNFTYPSVLKACGEELDLGFGK 221
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQY-SNWAASAYGNVALWNSMLSG 184
+HE I +Y G + + F+ + S WA N+ +WN++ G
Sbjct: 222 EVHESINA--------------SLYASMG-MWNEAFELFGSMWAEDIELNIIIWNTIAGG 266
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE----------RDVVS 234
++ G K + L S + KCG D +AL + +++ S
Sbjct: 267 -------YLRTGNYKGALELLSQMR---KCGSHLDSVALIIGLGACSHIGDAKLGKEIHS 316
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
+ I CF +AL+ MYS C L A LF + ++ WNS+ISG
Sbjct: 317 FA--IRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEA------KSLITWNSIISGC 368
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
+++EEA LL + G+ + T S L C + N + + ++
Sbjct: 369 CHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCY-MTRREDFKD 427
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
++ + L+D+YAR G V A +F L ++D + ++ +I G G A LF +M
Sbjct: 428 HLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMN 487
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR---GFEKEDITLTSLIDMYLKCG 471
N + + +VL CS + +G+ + F R G + D++ + G
Sbjct: 488 NFQIKPDHITMIAVLSACSHSGLVTQGQLL--FEKMRSLYGLTPHLEHFACMTDLFGRAG 545
Query: 472 EIDDGLALFKFMPERDVVS-WTGIIVGC 498
++ + + MP + + W +I C
Sbjct: 546 LLNKAKEIIRNMPYKPTPAMWATLIGAC 573
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 40/261 (15%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D ++ L C K GK +H I+ + N L++MY+ L A+ L
Sbjct: 290 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLL 349
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M K++++W ++++ R A L ML +G +EPN ++VL C+ +
Sbjct: 350 FQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFG-IEPNYVTIASVLPLCARVAN 408
Query: 121 LDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
L G+ H +TR + D +L+ N L+DMY + G + R++FD
Sbjct: 409 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLG------------ 456
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF----NFMPERDVV 233
E++ +T TS+I Y GE L LF NF + D +
Sbjct: 457 --------------------ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 496
Query: 234 SWTGIIVGCFECSCFTLSALV 254
+ ++ C T L+
Sbjct: 497 TMIAVLSACSHSGLVTQGQLL 517
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%)
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+++QD+ ISS+L C+ + SL G+Q+H + GFE+ I + L+ Y +
Sbjct: 93 SASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLV 152
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
D + + W +I +NG ++A++ +++M++ ++P+ T+ VL AC
Sbjct: 153 DAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC 211
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 309 HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR 368
H S+ + + +S L +C ++ + Q+HG I++ G+E I+ L+ Y+
Sbjct: 90 HASSASQDLIVHPISSLLSSCTDVKSLAE--GRQLHGHIISLGFEQHPILVPKLVTFYSA 147
Query: 369 LGNVKSA------LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+ A + H P W+ LI ++G A ++ M+ +
Sbjct: 148 FNLLVDAHVITENSNILHPFP------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDN 201
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F SVLK C L GK+VH E I + +Y G ++ LF
Sbjct: 202 FTYPSVLKACGEELDLGFGKEVH----------ESINAS----LYASMGMWNEAFELFGS 247
Query: 483 M----PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
M E +++ W I G + G K A+ +M + + + + L AC H G
Sbjct: 248 MWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIG 306
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 288/579 (49%), Gaps = 46/579 (7%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL-TRKLFDQY 164
+ S V A S+ L LGR H +I + K + L N L++MY K L + KL +
Sbjct: 9 LASVVELAVSVRSSL-LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHAF-------------CVKRGFEKEDVTLTSLIDMY 211
+ + V W ++++G Q F CV+ D T ++
Sbjct: 68 APCRS-----VVTWTALIAGSVQNGCFVSALLHFSDMLSDCVR----PNDFTFPCVLKAS 118
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
G L + +++ + VGC ++ DMYS L +A K+FD
Sbjct: 119 TGLRMDTTGKQLHALAVKEGLIN--DVFVGC---------SVFDMYSKLGFLNDAYKVFD 167
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + N+ WN+ IS VL+ + E+++ + G DS TF + L AC +
Sbjct: 168 EMP------HRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSD 221
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L Q+HG I+ SGY + V + LID Y + G V+ + +F R+ +++ V+WS
Sbjct: 222 KLGLGP--GCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWS 279
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI ++ A LF + + F++SSVL C+ L+ + G+ V A VK
Sbjct: 280 SLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKA 339
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
E+ ++L+DMY KCG ID+ F MPER++VSW ++ G G A +A+A
Sbjct: 340 CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALL 399
Query: 512 QEMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+EM + + P+ ++ + LSAC AG ++ IF SMK YG+EP EHY C+VDLLG
Sbjct: 400 EEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLG 459
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG + A I MPF P +IW ++L AC H +L + AE+L P+D +V+
Sbjct: 460 RAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVV 519
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
LSN++A G W+ ++ VR K++G KK AG SWI V S
Sbjct: 520 LSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDS 558
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 174/435 (40%), Gaps = 108/435 (24%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK LH +K GL D+F G ++ MY+ LNDA+K+FDEM +N+ +W ++
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ RP ++ + +L G +P+ + A L ACS L G +H I R +
Sbjct: 187 HGRPEDSVIAFIELLRVGG-KPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS 245
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY------------------GN 174
+ N L+D Y KCG + + +FD+ +W++ +AY +
Sbjct: 246 VSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKED 305
Query: 175 VALWNSMLSG-------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
+ + M+S G+ V A VK E+ ++L+DMY KCG ID+
Sbjct: 306 IEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAE 365
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
FN MPER++VSW ++ G +A +
Sbjct: 366 QAFNAMPERNLVSWNALLGG----------------------------------YAHQGH 391
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY-TFTSALKACINLLNFNSRFA 340
N +A+ LL + S+ + SY + AL AC SR
Sbjct: 392 AN------------------KAVALLEEMTSAAGIVPSYVSLICALSAC-------SRAG 426
Query: 341 LQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVA-WSGL 393
G+ + + Y V L+DL R G V+ A + R+P ++ W L
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486
Query: 394 IMGCTKHGLNSLAYL 408
+ C HG L L
Sbjct: 487 LGACRMHGKPELGKL 501
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G LH II+ G Q++ N L+ Y + + +FD M +N
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW++++ AY N A L+ + +EP FM S+VL AC+ +++ GR +
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKE-DIEPTDFMVSSVLCACAGLSEIEFGRSVQA 334
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-GKQV 188
+ +E + + + L+DMY KCGS+ +Q N A N+ WN++L G Q
Sbjct: 335 LAVKACVEQNIFVASALVDMYGKCGSIDNA--EQAFN--AMPERNLVSWNALLGGYAHQG 390
Query: 189 HA---------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
HA G V+L + + G++ G+ +F M ER
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKER 441
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/650 (28%), Positives = 305/650 (46%), Gaps = 94/650 (14%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---------- 157
Y A+L+ C G +H +++ L N LL M+V+ G L
Sbjct: 97 YIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMA 156
Query: 158 -RKLFD---QYSNWAASAYGNVAL-------WNSM-------------------LSGGKQ 187
R LF +A + Y + AL W + L+ G++
Sbjct: 157 ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGRE 216
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS- 246
VH ++ GFE + + +LI MY+KCG+I +F+ MP RD +SW +I G FE
Sbjct: 217 VHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDV 276
Query: 247 CFT----------------LSALVDMYSNCNVLCEAR----------------------K 268
C L + + S C L + R
Sbjct: 277 CLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNS 336
Query: 269 LFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L +SS ++ + ++ W +MISGY N E+A+ + + G+ D
Sbjct: 337 LIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPD 396
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
T S L AC L + + +H +G IV ++LID+Y++ + ALE+
Sbjct: 397 EITIASVLSACAGLGLLDK--GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
FHR+P K+V++W+ +I+G + + A F+ MI S + N + SVL C+ + +L
Sbjct: 455 FHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKP-NSVTLVSVLSACARIGAL 513
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
GK++HA ++ G + +L+DMY++CG ++ F E+DV SW ++ G
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGY 572
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q G+ A+ F +MI+S + P+EITF +L AC +G+V + F SM+ ++ + P+
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPN 632
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
L+HY +VDLLG+AG +DA + I +MP PD IW ++L AC + N +L + A+ +
Sbjct: 633 LKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIF 692
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+ Y++L N+YA G WD +++VRK ++ G SW+EV+
Sbjct: 693 EMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVA 742
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 172/448 (38%), Gaps = 119/448 (26%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + + C + G+ +H +IK G ++ N+L+ M++ ++A +F
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF 354
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+M K++VSWT M++ Y N P A+ Y ++E+ V P+ ++VL AC+ G L
Sbjct: 355 SKMEFKDLVSWTAMISGYEKNGLPEKAVETYT-IMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWN 179
D G ++HE R L ++ N+L+DMY KC + + L F + N NV W
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN------KNVISWT 467
Query: 180 SMLSG-------------------------------------------GKQVHAFCVKRG 196
S++ G GK++HA ++ G
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
+ +L+DMY++CG ++ FN E+DV SW ++ G
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTG--------------- 571
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+A G + A+ L + S +
Sbjct: 572 -------------------YAQQGKGGL------------------AVELFHKMIESDVN 594
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLG 370
D TFTS L AC SR + GL E + + NL +DL R G
Sbjct: 595 PDEITFTSLLCAC-------SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647
Query: 371 NVKSALELFHRLP-KKDVVAWSGLIMGC 397
++ A E ++P D W L+ C
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNAC 675
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 221/769 (28%), Positives = 347/769 (45%), Gaps = 121/769 (15%)
Query: 9 ALRHCGQR--RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD-FTSLNDAHKLFDEMA 65
ALR C + K G +H I K D+ N L+SMY S NDA +FD +
Sbjct: 651 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIG 710
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG---SVEPNGFMYSAVLKA-------- 114
+N +SW ++++ Y+ A L++ M + G S +PN + + +++ A
Sbjct: 711 IRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFG 770
Query: 115 -CSL---------SG---DLDLGRLIHERITREKLEYD------------TVLMNTLLDM 149
C L SG DL +G + R L D V MN L+
Sbjct: 771 LCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVG 830
Query: 150 YVKC--GSLTRKLFDQYSNWAA----------SAYGNVALWNSMLSGGKQVHAFCVKRGF 197
VK G K+F + + SA+ ++ G++VHA ++ G
Sbjct: 831 LVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGL 890
Query: 198 EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC--------- 247
V + L++MY K G I D ++F M E+D VSW +I G + C
Sbjct: 891 NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFL 950
Query: 248 -----------FTL-----------------------------------SALVDMYSNCN 261
FTL +AL+ +Y+
Sbjct: 951 RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCIDSY 320
E K+F Y V+ WNS+I +E + +A+ + G +
Sbjct: 1011 CFTECLKVFS-----LMPEYDQVS-WNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRV 1064
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF + L A ++ L+ + + Q+H L++ D +G+ L+ Y + G + ++F
Sbjct: 1065 TFINILSA-VSSLSLH-EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFA 1122
Query: 381 RLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
R+ + +D V+W+ +I G + L A L M+ Q ++ F ++VL C+ +A+L
Sbjct: 1123 RMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLE 1182
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
RG +VHA ++ E + + ++L+DMY KCG ID F+ MP R+V SW +I G
Sbjct: 1183 RGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYA 1242
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEIT-FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
++G ++A+ F M+ P+ + LGVLSAC H G VEE + F SM Y L P
Sbjct: 1243 RHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPR 1302
Query: 559 LEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKLVSIIAEQ 616
+EH+ CMVDLLG+AG D+ I MP KP+ IW ++L AC N NT+L AE
Sbjct: 1303 VEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEM 1362
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
LL P++ YV+L+N+YA+ W+ ++K R A K+ KK AG SW+
Sbjct: 1363 LLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWV 1411
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 281/600 (46%), Gaps = 44/600 (7%)
Query: 20 KQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
++ + LH + IKYG ++F N L+++Y L A KLFDEM+ +N+V+W +++ Y
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD--LDLGRLIHERITREKLE 137
T N +P+ A + M+ G + PN + + + L+AC SG LG IH I++ +
Sbjct: 621 TQNGKPDEACARFRDMVRAGFI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679
Query: 138 YDTVLMNTLLDMYVKC---GSLTRKLFDQYSNWAASAYGNVALWNSMLS----GGKQVHA 190
D V+ N L+ MY C + R +FD+ N WNS++S G V A
Sbjct: 680 SDVVVCNVLISMYGSCLDSANDARSVFDRI------GIRNSISWNSIISVYSRRGDXVSA 733
Query: 191 FCVKRGFEKE---------DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ + +KE + T SLI C +D GL + M R V +G
Sbjct: 734 YDLFSSMQKEGLGFSFKPNEYTFGSLITA--ACSSVDFGLCVLEQMLAR--VEKSG---- 785
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
F + SALV ++ + +A+ +F+Q NV N ++ G V +Q E
Sbjct: 786 -FLQDLYVGSALVSGFARFGLTDDAKNIFEQM------GVRNVVSMNGLMVGLVKQKQGE 838
Query: 302 EAITLLSHIHS-SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VG 359
A + + G+ DSY + + ++L R +VH ++ +G + + +G
Sbjct: 839 AAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 898
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
+ L+++YA+ G + A +F + +KD V+W+ LI G ++ + A F M +
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ F + S L C+ L + G+Q+H +K G + + +L+ +Y + G + L +
Sbjct: 959 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 1018
Query: 480 FKFMPERDVVSWTGIIVGCGQN-GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F MPE D VSW +I + +A+ YF EM++ + +TF+ +LSA L
Sbjct: 1019 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
E + I ++ +Y L ++ G+ G ++ E++ A M D+ W SM+
Sbjct: 1079 HEVSHQIH-ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 1137
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L C I G+ +HC +K GL D+ N LL++YA+ + K+F M
Sbjct: 964 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023
Query: 66 RKNIVSWTTMVTAYT-SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ VSW +++ A + S + A++ + M+ G + + +L A S ++
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR-GGWGLSRVTFINILSAVSSLSLHEVS 1082
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML 182
IH + + L DT + N LL Y KCG + K+F + S + WNSM+
Sbjct: 1083 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETR-----DEVSWNSMI 1137
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG G +VHA ++ E
Sbjct: 1138 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACME 1197
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ V ++L+DMY KCG ID F MP R+V SW +I G
Sbjct: 1198 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 1240
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 12/259 (4%)
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
S A ++H + G+ + + + LI++Y R+G++ SA +LF + +++V W+ LI G
Sbjct: 560 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 619
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC--SCLASLRRGKQVHAFCVKRGFE 454
T++G A FRDM+ + N + S L+ C S + + G Q+H K +
Sbjct: 620 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679
Query: 455 KEDITLTSLIDMYLKC-GEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + LI MY C +D ++F + R+ +SW II + G A F
Sbjct: 680 SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSS 739
Query: 514 MIQSRL----KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY---CMV 566
M + L KPNE TF +++A V+ + M L+ Y +V
Sbjct: 740 MQKEGLGFSFKPNEYTFGSLITAA--CSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALV 797
Query: 567 DLLGQAGCFDDAEQLIAEM 585
+ G DDA+ + +M
Sbjct: 798 SGFARFGLTDDAKNIFEQM 816
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D L C ++++G +H I+ + D+ G+ L+ MY+ ++ A +
Sbjct: 1163 LDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRF 1222
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M +N+ SW +M++ Y + A++L+ M+ G + VL ACS G
Sbjct: 1223 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGF 1282
Query: 121 LDLG 124
++ G
Sbjct: 1283 VEEG 1286
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/671 (27%), Positives = 339/671 (50%), Gaps = 48/671 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY-ADFTSLNDAHKLFDEMARKN 68
LR C R G +H +++ GL ++ F G++L+ MY L DA ++F + ++
Sbjct: 156 LRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERD 215
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W M++ + N RL++ M E ++P+ ++++LK CS+ ++ IH
Sbjct: 216 VVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEV---MQIH 272
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + E D V+ + ++D+Y KC ++ RK+FD + +W+SM+SG
Sbjct: 273 GIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEK------KDNFVWSSMISGYT 326
Query: 185 ----GKQVHAF----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G++ F C +R + + L+S + ++ +++ G+ + M
Sbjct: 327 MNNRGEEAVNFFKDMCRQR-VKLDQHVLSSTLKACVEIEDLNTGVQVHGLM--------- 376
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
I + CF S L+++Y++ L + KLF + ++ WNSMI
Sbjct: 377 --IKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDD------KDIVAWNSMILAQAR 428
Query: 297 NEQN-EEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
Q + L + ++ + I T + LK+C + + Q+H LIV S
Sbjct: 429 PGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPA--GRQIHSLIVKSSLCR 486
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
+VG+ L+ +Y+ + A + F + +KD +WS +I C ++ + S A L ++M+
Sbjct: 487 HTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEML 546
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + + + + CS L ++ GKQ+H F +K G+ + +S+IDMY KCG I+
Sbjct: 547 DEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIE 606
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+ +F + + V++ II G +G+A++AI ++ ++ + PN +TFL ++SAC
Sbjct: 607 ESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACS 666
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
HAG VEE +FT M +Y ++P EHY C+VD G+AG ++A Q++ + ++ W
Sbjct: 667 HAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAW 723
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
++L AC H+N K+ A +++ +P D + Y++LSN+Y G W+ RK K+
Sbjct: 724 RTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKI 783
Query: 655 GEKK-AGMSWI 664
KK G SW+
Sbjct: 784 RVKKDPGNSWL 794
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/612 (25%), Positives = 291/612 (47%), Gaps = 60/612 (9%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+ Q +H ++I N LLS Y+ ++ + AHKLFD+M +N+V+WTT++++
Sbjct: 64 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
+ + A ++NHM PN ++ +L+AC+ +G IH + R LE
Sbjct: 124 HLKYGSVSKAFEMFNHM-RVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLER 182
Query: 139 DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG----NVALWNSMLSGGKQVHAFCV- 193
+ ++L+ MY+K G R + YG +V WN M+SG Q F +
Sbjct: 183 EKFAGSSLVYMYLKGGDDLRDALRVF-------YGLLERDVVAWNVMISGFAQNGDFRMV 235
Query: 194 ---------KRGFEKEDVTLTSLIDMYLKCGEIDDGLA-----LFNFMPERDVVSWTGII 239
++G + + +T SL LKC + + + ++ F E DVV
Sbjct: 236 QRLFSEMWEEQGLKPDRITFASL----LKCCSVLNEVMQIHGIVYKFGAEVDVV------ 285
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
SA+VD+Y+ C + RK+FD + +W+SMISGY +N +
Sbjct: 286 ---------VESAMVDLYAKCRDVSSCRKIFDSMEK------KDNFVWSSMISGYTMNNR 330
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EEA+ + + +D + +S LKAC+ + + N+ +QVHGL++ +G++ D V
Sbjct: 331 GEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNT--GVQVHGLMIKNGHQNDCFVA 388
Query: 360 SNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN-SLAYLLFRDMINSN- 417
S L++LYA G + +LF R+ KD+VAW+ +I+ + G LF+++ +
Sbjct: 389 SVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTF 448
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + +VLK C + L G+Q+H+ VK + + +L+ MY +C +IDD
Sbjct: 449 LQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAF 508
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F + +D SW+ II C QN +A+ +EM+ + + +SAC
Sbjct: 509 KAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLL 568
Query: 538 LVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
+ E + ++K Y + ++ ++D+ + G +++E++ E KP++ + +
Sbjct: 569 TISEGKQLHVFAIKSGYSCDVYIGS--SIIDMYAKCGNIEESEKVFDEQ-LKPNEVTFNA 625
Query: 597 MLKACETHNNTK 608
++ H +
Sbjct: 626 IISGYAHHGKAQ 637
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 175/451 (38%), Gaps = 116/451 (25%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L+ C + + G +H +IK G D F + LL++YA F L D KL
Sbjct: 348 LDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKL 407
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWA----IRLYNHMLEYGSVEPNGFMYSAVLKACS 116
F + K+IV+W +M+ A RP ++L+ + ++ G AVLK+C
Sbjct: 408 FSRIDDKDIVAWNSMILA---QARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCE 464
Query: 117 LSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVA 176
DL GR IH I + L T++ N L+ MY +C +++ D + + + +
Sbjct: 465 KDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSEC----KQIDDAFKAFVDIVRKDDS 520
Query: 177 LWNSM--------------------------------------------LSGGKQVHAFC 192
W+S+ +S GKQ+H F
Sbjct: 521 SWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFA 580
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
+K G+ + +S+IDMY KCG I++ +F+ + + V++ II G
Sbjct: 581 IKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISG----------- 629
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
Y + + ++AI +LS +
Sbjct: 630 -----------------------------------------YAHHGKAQQAIEVLSKLEK 648
Query: 313 SGMCIDSYTFTSALKACIN---LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+G+ + TF + + AC + + + F L + + E Y S L+D Y R
Sbjct: 649 NGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSE-HY---SCLVDAYGRA 704
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
G ++ A ++ + + AW L+ C H
Sbjct: 705 GRLEEAYQIVQKDGSES--AWRTLLSACRNH 733
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 249/448 (55%), Gaps = 46/448 (10%)
Query: 247 CFTLSA-LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
C +LS L++MY C ++ +A LF+Q + + W S+++ N+ N +T
Sbjct: 37 CKSLSNNLINMYGKCGLIQDALNLFNQL------PHRDPISWASILTAN--NQANLPHLT 88
Query: 306 L---LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
L + G+ D Y F +KAC L QVH + S D +V S+L
Sbjct: 89 LSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQ--GKQVHATFIVSPVSDDDVVKSSL 146
Query: 363 IDLYARLG----------NVKS---------------------ALELFHRLPKKDVVAWS 391
+D+YA+ G ++ S A++LF ++P K++++W+
Sbjct: 147 VDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWT 206
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
LI G + G ++ LF +M + D V+ FI+SS++ + LA L GKQ+H +
Sbjct: 207 ALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVIL 266
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
G+E +L+DMY KC ++ +F M +RD+VSWT IIVG Q+G A+EA++
Sbjct: 267 LGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSL 326
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+ M+ + LKPNE+TF+G++ AC H GLV + F SM +YG+ P L+HY C++DLL
Sbjct: 327 YNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLS 386
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
++G ++AE LI MPFKPD+ WA++L AC H NT + +A+ LL+ PEDPS Y++
Sbjct: 387 RSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYIL 446
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK 658
LSN+YA+ MW+S+SKVR+ + KK
Sbjct: 447 LSNIYASAAMWESVSKVRRLMAAMEVKK 474
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 235/504 (46%), Gaps = 72/504 (14%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+V L+ C + +S GK LHC IIK G+ Q NNL++MY + DA LF+++
Sbjct: 5 HLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQL 64
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++ +SW +++TA P+ + ++ M + ++P+ ++++ ++KAC++ G + G
Sbjct: 65 PHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQG 124
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSML 182
+ +H + D V+ ++L+DMY KCG + R +FD S+ N W +M+
Sbjct: 125 KQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISS------KNSISWTAMI 178
Query: 183 SG----GKQVHAFCVKRGFE-KEDVTLTSLIDMYLKCGEIDDGLALFNFMPER--DVV-- 233
SG G+++ A + + K ++ T+LI ++ G D LF M + D+V
Sbjct: 179 SGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP 238
Query: 234 ----SWTG-----------------IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
S G +I+ +E S F +ALVDMY+ C+ + A+K+F +
Sbjct: 239 FILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGR 298
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
++ W S+I G + EEA++L + + S+G+ + TF + AC
Sbjct: 299 M------VQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYAC--- 349
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KK 385
S L G + DY + + L+DL +R G+++ A L +P K
Sbjct: 350 ----SHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKP 405
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINS--NQDVNQFII-----------SSVLKVC 432
D W+ L+ C H N+L + D + S +D + +I+ SV KV
Sbjct: 406 DEATWAALLSACNHHR-NTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVR 464
Query: 433 SCLASLRRGKQVHAFCVKRGFEKE 456
+A++ K+ C+ G E +
Sbjct: 465 RLMAAMEVKKEPGYSCIVLGKESQ 488
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 207/464 (44%), Gaps = 69/464 (14%)
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN--- 166
L+AC+ +G+ +H I + ++ L N L++MY KCG + LF+Q +
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 167 --WAASAYGN---------VALWNSM-------------------------LSGGKQVHA 190
WA+ N ++++ +M + GKQVHA
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ +DV +SL+DMY KCG D G +F+ + ++ +SWT +I G
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISG--------- 180
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
Y+ +A +LF + N+ W ++ISG V + ++ L +
Sbjct: 181 ------YAQSGRKLDAIQLFQKM------PVKNLLSWTALISGLVQSGNWVDSFYLFMEM 228
Query: 311 HSSGM-CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
S G+ +D + +S + A NL Q+H L++ GYE V + L+D+YA+
Sbjct: 229 RSKGIDIVDPFILSSIIGASANLAVLG--LGKQIHCLVILLGYESSLFVSNALVDMYAKC 286
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+V +A ++F R+ ++D+V+W+ +I+G +HGL A L+ M+++ N+ ++
Sbjct: 287 SDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLI 346
Query: 430 KVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERD 487
CS + + +G+ +K G T L+D+ + G +++ L K MP + D
Sbjct: 347 YACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPD 406
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
+W ++ C + I ++ LKP + + +LS
Sbjct: 407 EATWAALLSACNHHRNTLIGIRVADHLLS--LKPEDPSTYILLS 448
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 118/210 (56%), Gaps = 5/210 (2%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
++H I+ +G + + +NLI++Y + G ++ AL LF++LP +D ++W+ ++ +
Sbjct: 24 KLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQAN 83
Query: 402 LNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
L L +F M + + ++ + ++K C+ L ++++GKQVHA + +D+
Sbjct: 84 LPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVK 143
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+SL+DMY KCG D G +F + ++ +SWT +I G Q+GR +AI FQ+M L
Sbjct: 144 SSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL- 202
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
+++ ++S +G +++ +F M+
Sbjct: 203 ---LSWTALISGLVQSGNWVDSFYLFMEMR 229
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 305/635 (48%), Gaps = 91/635 (14%)
Query: 45 LSMYADFTSLNDAHKLFDE--MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVE 102
++ YA L+ A K+FDE + + + SW MV AY ++P A+ L+ M + +V
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS 88
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKL-EYDTVLMNTLLDMYVKCGSLTR--K 159
NG +SG + G L R + + + + V +++ YV+ G + +
Sbjct: 89 WNGL----------ISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAER 138
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
LF W + NV W ML G L+ G +DD
Sbjct: 139 LF-----WHMP-HKNVVSWTVMLGG--------------------------LLQEGRVDD 166
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
LF+ MPE+DVV+ T +I G Y L EAR LFD+
Sbjct: 167 ARKLFDMMPEKDVVAVTNMIGG---------------YCEEGRLDEARALFDEMPK---- 207
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLL------SHIHSSGMCIDSYTFTSALKACINLL 333
NV W +M+SGY N + + A L + + + M + YT + ++ +L
Sbjct: 208 --RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLL-GYTHSGRMREASSLF 264
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+ A+ V ++V + + I+G L G V A +F + ++D WS +
Sbjct: 265 D-----AMPVKPVVVCN----EMIMGFGLN------GEVDKARRVFKGMKERDNGTWSAM 309
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I + G A LFR M +N + SVL VC LASL GKQVHA V+ F
Sbjct: 310 IKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF 369
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+++ + LI MY+KCG + +F P +DVV W +I G Q+G +EA+ F +
Sbjct: 370 DQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHD 429
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M S + P+++TF+GVLSAC ++G V+E +F +MK +Y +EP +EHY C+VDLLG+A
Sbjct: 430 MCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRAD 489
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
++A +L+ +MP +PD +W ++L AC TH L + E+L P++ YV+LSN
Sbjct: 490 QVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSN 549
Query: 634 VYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+YA G W + +R+ K K G SWIEV
Sbjct: 550 MYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVE 584
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 218/477 (45%), Gaps = 55/477 (11%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
++ + N L+S + L++A ++FD M +N+VSWT+MV Y N A RL+ H
Sbjct: 83 QRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWH 142
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M V ++ +L G +D R + + + E D V + ++ Y + G
Sbjct: 143 MPHKNVVS-----WTVMLGGLLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEG 193
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSL 207
L R LFD+ NV W +M+SG + V R E+ +V+ T++
Sbjct: 194 RLDEARALFDEMPK------RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAM 247
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ Y G + + +LF+ MP + VV +I+G F L+ VD +AR
Sbjct: 248 LLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMG------FGLNGEVD---------KAR 292
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F + W++MI Y EA+ L + G+ ++ + S L
Sbjct: 293 RVFKGMKE------RDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLS 346
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C++L + + QVH +V S ++ D V S LI +Y + GN+ A ++F+R P KDV
Sbjct: 347 VCVSLASLD--HGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDV 404
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH-- 445
V W+ +I G ++HGL A +F DM +S + VL CS ++ G ++
Sbjct: 405 VMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFET 464
Query: 446 ---AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
+ V+ G E L+D+ + ++++ + L + MP E D + W ++ C
Sbjct: 465 MKCKYQVEPGIEH----YACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGAC 517
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
++ ++ L C S+ GK +H ++++ QD++ + L++MY +L A ++
Sbjct: 336 LNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQV 395
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ K++V W +M+T Y+ + A+ +++ M G V P+ + VL ACS SG
Sbjct: 396 FNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG-VPPDDVTFIGVLSACSYSGK 454
Query: 121 LDLG 124
+ G
Sbjct: 455 VKEG 458
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 250/433 (57%), Gaps = 20/433 (4%)
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSS--WAASAYGNVALWNSMISGYVLNEQNEEA 303
S F ++ +VD+ CN E +Y++ + A N L+N+MI Y N+ A
Sbjct: 90 SSFLVTKMVDV---CNHYGET-----EYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLA 141
Query: 304 IT----LLSHIHSSGMCI-DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
IT +L + H D +TF +K+C L+ ++ QVHG + G + + +V
Sbjct: 142 ITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD--LGKQVHGHVFKFGQKSNTVV 199
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKD--VVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
++L+++Y + ++ A +F + ++D + +W+ ++ G + G + A FR M
Sbjct: 200 ENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMV 259
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ ++ + SVL C+ L +L GK +H + K GF + +LI+MY KCG ID G
Sbjct: 260 GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQG 319
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
LF M ERDV+SW+ +IVG +GRA+EAI FQEM +++++P+ ITF+G+L+AC HA
Sbjct: 320 RRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHA 379
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
GL+ E F SMK +Y +EP +EHY C+V+LLG +G D A +L+ +MP KPD IW S
Sbjct: 380 GLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGS 439
Query: 597 MLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLG 655
+L +C +H N K+ I E LL P D YV+LSN+YA LG WD +S++RK + K
Sbjct: 440 LLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSM 499
Query: 656 EKKAGMSWIEVSS 668
+K G S IEV +
Sbjct: 500 KKTPGCSSIEVDN 512
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 199/475 (41%), Gaps = 112/475 (23%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L+ C +I + K +H I+K+ LSQ F ++ + + A+ LF +A
Sbjct: 63 VPILKDCP---NIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVAD 119
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHML--EYG--SVEPNGFMYSAVLKACSLSGDLD 122
N + M+ AY NK AI +Y ML +G + P+ F + V+K+C+ D
Sbjct: 120 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 179
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNS 180
LG+ +H + + + +TV+ N+L++MYVKC SL ++F++ + A+ + W +
Sbjct: 180 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFS----WTA 235
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
++SG GK +H + K G
Sbjct: 236 IVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAG 295
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDM 256
F + +LI+MY KCG ID G LF+ M ERDV+SW+ +IVG
Sbjct: 296 FLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVG--------------- 340
Query: 257 YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC 316
+N EA +LF + + S+I+ + LL+ +G+
Sbjct: 341 LANHGRAREAIELFQEMQ--------KAKIEPSIIT----------FVGLLTACAHAGLL 382
Query: 317 IDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+ + ++K ++N ++ +G +V NL+ L RL AL
Sbjct: 383 NEGLRYFESMKR-----DYNIEPGVEHYGCLV------------NLLGLSGRL---DQAL 422
Query: 377 ELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVL 429
EL ++P+K D W L+ C HG +A + ++ D +++ S L
Sbjct: 423 ELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNL 477
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C Q +++ GK +H K G ++I N L+ MYA S++ +LFD+M
Sbjct: 268 LVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMK 327
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++SW+TM+ ++ R AI L+ M + +EP+ + +L AC+ +G L+ G
Sbjct: 328 ERDVISWSTMIVGLANHGRAREAIELFQEM-QKAKIEPSIITFVGLLTACAHAGLLNEGL 386
Query: 126 LIHERITRE 134
E + R+
Sbjct: 387 RYFESMKRD 395
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 234/420 (55%), Gaps = 9/420 (2%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F LS+L+ MY++C + AR +FD A+ V +WN++++ Y+ N E + +
Sbjct: 156 FVLSSLIHMYASCGDVAAARLVFD------AAEESGVVMWNAIVAAYLKNGDWMEVVEMF 209
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G+ D T S + AC + +++ V G + G + + + L+D+YA
Sbjct: 210 KGMLEVGVAFDEVTLVSVVTACGRI--GDAKLGKWVAGHVDEEGLARNPKLVTALMDMYA 267
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G + A LF + +DVVAWS +I G T+ A LF +M + + N + S
Sbjct: 268 KCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVS 327
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL C+ L +L GK VH++ ++ I T+L+D Y KCG IDD + F+ MP ++
Sbjct: 328 VLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKN 387
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
+WT +I G NGR +EA+ F M ++ ++P ++TF+GVL AC H+ LVEE F
Sbjct: 388 SWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFD 447
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SM +YG++P +EHY CMVDLLG+AG D+A Q I MP +P+ IW ++L +C H N
Sbjct: 448 SMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNV 507
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ +Q+++ +P YV+LSN+YA+ G W + VRK K G EK G S IE+
Sbjct: 508 GIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIEL 567
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 8/325 (2%)
Query: 287 WNSMISGYVLNEQNEEAITL-LSHIHSSGMC-IDSYTFTSALKACINLLNFNSRFALQVH 344
+N ++ ++ E+A+ L + +H++ C D +T ALK+C + + +Q +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS 404
V G D V S+LI +YA G+V +A +F + VV W+ ++ K+G
Sbjct: 146 A--VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWM 203
Query: 405 LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
+F+ M+ ++ + SV+ C + + GK V + G + +T+L+
Sbjct: 204 EVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALM 263
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
DMY KCGEI LF M RDVV+W+ +I G Q + +EA+ F EM +R++PN++
Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 525 TFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
T + VLSAC G +E W + L L +VD + GC DDA +
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG--TALVDFYAKCGCIDDAVEAFE 381
Query: 584 EMPFKPDKTIWASMLKACETHNNTK 608
MP K T W +++K T+ +
Sbjct: 382 SMPVKNSWT-WTALIKGMATNGRGR 405
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 162/445 (36%), Gaps = 119/445 (26%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + ++ G+ + +K GL D F ++L+ MYA + A +FD
Sbjct: 126 ALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESG 185
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V W +V AY N + ++ MLE G V + +V+ AC GD LG+ +
Sbjct: 186 VVMWNAIVAAYLKNGDWMEVVEMFKGMLEVG-VAFDEVTLVSVVTACGRIGDAKLGKWVA 244
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ E L + L+ L+DMY KCG + R+LFD + +V W++M+SG
Sbjct: 245 GHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSR------DVVAWSAMISGYT 298
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
GK VH++ ++ +
Sbjct: 299 QADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI 358
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNV 262
T+L+D Y KCG IDD + F MP ++ +WT +I G M +N
Sbjct: 359 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG--------------MATN--- 401
Query: 263 LCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTF 322
+ EA+ L S + +G+ TF
Sbjct: 402 -----------------------------------GRGREALELFSSMREAGIEPTDVTF 426
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSAL 376
L AC S L G DY + ++DL R G V A
Sbjct: 427 IGVLMAC-------SHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAY 479
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKH 400
+ +P + + V W L+ C H
Sbjct: 480 QFIRTMPIEPNAVIWRALLSSCAVH 504
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V + CG+ K GK + + + GL+++ L+ MYA + A +LFD M
Sbjct: 224 LVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQ 283
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++V+W+ M++ YT + A+ L++ M + VEPN +VL AC++ G L+ G+
Sbjct: 284 SRDVVAWSAMISGYTQADQCREALGLFSEM-QLARVEPNDVTMVSVLSACAVLGALETGK 342
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H + R++L T+L L+D Y KCG + + S +++ AL M + G
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 402
Query: 186 KQVHA---FCVKR--GFEKEDVTLTSLIDMYLKCGE---IDDGLALFNFM 227
+ A F R G E DVT I + + C +++G F+ M
Sbjct: 403 RGREALELFSSMREAGIEPTDVT---FIGVLMACSHSCLVEEGRRHFDSM 449
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 144/320 (45%), Gaps = 13/320 (4%)
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGS--NLIDLYARLGNV-KSALELFHRLPKKDVVA 389
L + + Q+H ++ SG EL S +L++ A + A+ LF P+ +
Sbjct: 25 LRADPSYLPQLHAALIKSG-ELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLST 83
Query: 390 --WSGLIMGCTKHGLNSLAYLLFRDMINSNQ--DVNQFIISSVLKVCSCLASLRRGKQVH 445
++ L+ G A LF +M+++ +Q + LK CS + +L G+ V
Sbjct: 84 PCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQ 143
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
A+ VKRG + L+SLI MY CG++ +F E VV W I+ +NG
Sbjct: 144 AYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWM 203
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
E + F+ M++ + +E+T + V++AC G + + + E GL + + +
Sbjct: 204 EVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVD-EEGLARNPKLVTAL 262
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAE-QLLATSPE 623
+D+ + G A +L M + D W++M+ + + + + +E QL P
Sbjct: 263 MDMYAKCGEIGKARRLFDGMQSR-DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPN 321
Query: 624 DPSKYVMLSNVYATLGMWDS 643
D + +LS A LG ++
Sbjct: 322 DVTMVSVLSAC-AVLGALET 340
>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/681 (28%), Positives = 340/681 (49%), Gaps = 42/681 (6%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + + L+ C + R++ GK +H +K GLS+D F G++L+ +Y+ ++D+ K
Sbjct: 142 LDEKTVTFGLKSCIELRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKA 201
Query: 61 FDEMARKNIVSWTTMVTAYTSN-KRPNW-AIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
F+E+ K+IVS+T+M+T Y+ N +W A ++ + M + ++E N ++L+
Sbjct: 202 FEEILDKDIVSYTSMITGYSENMDSTSWNAFKIVSDM-SWSNLEVNRVTLVSLLQVAGNL 260
Query: 119 GDLDLGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVAL 177
G + G+ +H I R+ D VL +L+ MY++CG+ S ++ +VA
Sbjct: 261 GAIREGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGACQLA-----SAVLKNSAQSVAS 315
Query: 178 WNSMLSG-------GKQVHAFCV---KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WN+ML+G G +H + + + VT ++I C E L N
Sbjct: 316 WNAMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVIS---ACAE------LCNSG 366
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
V ++ II +AL+ +Y C + +++LF+Q + +
Sbjct: 367 YAASVHAY--IIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQL------VVKDTVSY 418
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGL 346
N+MI GY+ N EAI LL + + + + T S L A + +F R+ +HG
Sbjct: 419 NAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARGRW---IHGF 475
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G+ + + + +I +Y+ G + SA +F K++++W+ ++MGC G
Sbjct: 476 SIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQT 535
Query: 407 YLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
LF+ ++ + + + + + ++ S L+ KQVH F + EK+ T+ SLI
Sbjct: 536 VELFQLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLIT 595
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
Y KCG +D ++LF + RD+ SW +I G +G + + F+ M + + P+ +T
Sbjct: 596 AYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLT 655
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F VLSAC HAGL++E IF SM Y + P EHY C VDL+ +AG ++ + I
Sbjct: 656 FSSVLSACSHAGLIKEGLHIFQSMTSMYSVRPQEEHYGCFVDLMSRAGHLEEGYKFIKLS 715
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
++ ++L AC T+ NT L +I+ +LL ++P Y ++S V+A G W+ +
Sbjct: 716 TLNDKSSVLCALLSACRTYGNTMLGQVISNELLEVGQQNPGTYALISEVFAQKGQWNKSA 775
Query: 646 KVRKAGKKLGEKK-AGMSWIE 665
+R K+ G +K G S IE
Sbjct: 776 SIRNRAKENGLRKLPGSSLIE 796
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 155/648 (23%), Positives = 280/648 (43%), Gaps = 77/648 (11%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ + ++C RS+K+ LH R++ GL +D+ G+ +L YA L F
Sbjct: 45 DVDKFALLFQNCTDVRSLKK---LHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCF 101
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
++ W +++ P AI LY L+ ++ + + LK+C +L
Sbjct: 102 QGFLNNDLAEWNSVMVDIFRAGYPEEAILLYRG-LKLRQIDLDEKTVTFGLKSCIELRNL 160
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + L D + ++L+ +Y K + ++K F++ + ++ +
Sbjct: 161 LLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILD------KDIVSYT 214
Query: 180 SMLSGGKQV------HAFCVK-----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
SM++G + +AF + E VTL SL+ + G I +G ++ +
Sbjct: 215 SMITGYSENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSI 274
Query: 229 ERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
RD+ GI E S LV MY C C+ S+ ++ +VA WN
Sbjct: 275 RRDI----GISDEVLETS------LVHMYMQCGA-CQLA------SAVLKNSAQSVASWN 317
Query: 289 SMISGYVLNEQNEEAITLLS-HIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+M++G V Q+ AI L ++ + DS T+ + + AC L NS +A VH I
Sbjct: 318 AMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVISACAELC--NSGYAASVHAYI 375
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ LD ++ + LI +Y + + + LF++L KD V+++ +I G ++G+ + A
Sbjct: 376 IRRSIPLDVVLATALIKVYLKCTRITISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAI 435
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
L ++M+ N I S+L + RG+ +H F ++ GF +I MY
Sbjct: 436 ALLKEMVTECVAPNFVTILSLLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQIIRMY 495
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITF 526
CG+I +F ++++SWT +++GC G + + FQ ++Q KP+ I
Sbjct: 496 SGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVELFQLLMQQHDNKPDSIAV 555
Query: 527 LGVLSACRHAG---------------LVEEAWTIFTSMKPEYG----------LEPHLEH 561
+ + A G L+E+ S+ Y L LEH
Sbjct: 556 MTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLSLEH 615
Query: 562 -----YYCMVDLLGQAGCFD---DAEQLIAEMPFKPDKTIWASMLKAC 601
+ M+ G G + + +L+ E PD ++S+L AC
Sbjct: 616 RDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSAC 663
>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
Length = 830
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 197/735 (26%), Positives = 331/735 (45%), Gaps = 118/735 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD-EM 64
++ + C + S+ +G+ +H RI + G L+ MYA S+++A ++FD +
Sbjct: 112 LLTVINACSESGSLAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRL 171
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
RKNIVSWTTMV+AY A+ L+ ML+ G V PN Y +VL AC DLD G
Sbjct: 172 LRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQEG-VAPNEITYVSVLNAC----DLDAG 226
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSN-----WAA-------- 169
R +H I + L+ D + N L+ MY +CGSL +FD ++ W +
Sbjct: 227 RKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASL 286
Query: 170 -SAYGNVALWNSMLSGG--------------------------KQVHAFCVKRGFEKEDV 202
A G + + ML G + +H V+ G + + +
Sbjct: 287 NEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTL 346
Query: 203 TLTSLIDM-------------------------------YLKCGEIDDGLALFNFMP--- 228
T+L+ + Y K G + D + L M
Sbjct: 347 VGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQ 406
Query: 229 -ERDVVSWTGIIVGC-----------------------FECSCFTLSALVDMYSNCNVLC 264
D V++ I+ C + +ALV MY+ C L
Sbjct: 407 VRPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLD 466
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+A+ +F++ S ++ W +M+ Y +EA I G D +
Sbjct: 467 DAKLVFEKMESR------DLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIA 520
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
AL AC NL + A H I G+E D +V + L+++Y+ G+++ A E F + +
Sbjct: 521 ALGACTNLSS-----ARDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDGIGE 575
Query: 385 KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQV 444
V++W+ LI T+ G A+ L R M + + +++V+ + L R+GK +
Sbjct: 576 PSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKGKII 635
Query: 445 HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD-VVSWTGIIVGCGQNGR 503
H ++ G E + + T+L++ Y KCG+ ++F+ + D VV+W + Q+G
Sbjct: 636 HDSILEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGH 695
Query: 504 AKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYY 563
A EA+ EM+Q + P +TF+ VLS C HAG+ + +F+S++ +Y ++P EHY
Sbjct: 696 ASEALHVLAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHLFSSLRWDYDMDPIPEHYG 755
Query: 564 CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE 623
CM+DLL + G ++A QL+ MP PD W ++L C + K +A QLL + +
Sbjct: 756 CMIDLLARGGWLEEARQLLKTMPTTPDSIKWMALLSGCHGASVDKTGVFMAMQLLQQNTQ 815
Query: 624 DPSKYVMLSNVYATL 638
S ++ +SN+Y+ +
Sbjct: 816 SSSAHIAISNLYSKI 830
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 243/568 (42%), Gaps = 96/568 (16%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ +LR C ++ +GK LH +I+ GL +++ N ++ MY S+++A K+FD+MA
Sbjct: 14 LAASLRAC---HTLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMA 70
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ W M+ AY A L++ ML+ G V P+ V+ ACS SG L GR
Sbjct: 71 SRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVV-PDRVTLLTVINACSESGSLAEGR 129
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------QYSNWAA--SAYGN- 174
+H RI E+ + L+ MY KCGS+ R++FD +W SAY
Sbjct: 130 RVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVER 189
Query: 175 -------------------------VALWNSM-LSGGKQVHAFCVKRGFEKEDVTLTSLI 208
V++ N+ L G++VH + G + + +LI
Sbjct: 190 GCLEQALTLFIEMLQEGVAPNEITYVSVLNACDLDAGRKVHRLIEQSGLDSDAFVGNALI 249
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
MY +CG ++D +F+ + +R+++ W +I G Y++ N
Sbjct: 250 KMYRRCGSLEDASLVFDGIADRNLLVWNSMIAG---------------YASLN------- 287
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
A G + + M+ G D +T + L A
Sbjct: 288 ----------EAQGTLEFFRKML--------------------LDGWKGDKHTLLTVLDA 317
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C + +H L V SG + D +VG+ L+ + + G+ KSA +F L KD+
Sbjct: 318 CAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLA 377
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS---LRRGKQVH 445
AW+ + KHG A L M ++ S+L C+ S L GK+ H
Sbjct: 378 AWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTH 437
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+++G+ + + T+L+ MY CG +DD +F+ M RD++SWT ++ Q
Sbjct: 438 EEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLD 497
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSAC 533
EA F+ + P+ + + L AC
Sbjct: 498 EASITFRRIQLEGHTPDRVALIAALGAC 525
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 168/387 (43%), Gaps = 48/387 (12%)
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ +V MY C + ARK+FD+ +S A LW M++ Y +EA L +
Sbjct: 47 NGIVHMYLVCKSVDNARKVFDKMASRDA------GLWAPMMAAYARVGHLQEATGLFHRM 100
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ D T + + AC + +VH I S +E VG+ L+ +YA+ G
Sbjct: 101 LDEGVVPDRVTLLTVINACSESGSLAE--GRRVHRRIQGSDFEWSVDVGTALVRMYAKCG 158
Query: 371 NVKSALELF-HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
+V A +F +RL +K++V+W+ ++ + G A LF +M+ N+ SVL
Sbjct: 159 SVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVL 218
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
C L G++VH + G + + +LI MY +CG ++D +F + +R+++
Sbjct: 219 NACD----LDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLL 274
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA------- 542
W +I G A+ + +F++M+ K ++ T L VL AC + ++ +
Sbjct: 275 VWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHD 334
Query: 543 -------------WTIFTSMKPEYG------------LEPHLEHYYCMVDLLGQAGCFDD 577
T +K E G L + CM + G D
Sbjct: 335 LAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRD 394
Query: 578 AEQLIAEMPF---KPDKTIWASMLKAC 601
A +L +M +PDK + S+L AC
Sbjct: 395 AMELQEQMKLDQVRPDKVTFVSILSAC 421
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
+++ L+ C +L +GK++HA V G +K ++ MYL C +D+ +F M
Sbjct: 14 LAASLRACH---TLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMA 70
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
RD W ++ + G +EA F M+ + P+ +T L V++AC +G + E
Sbjct: 71 SRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRR 130
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ ++ E ++ +V + + G D+A ++ + + W +M+ A
Sbjct: 131 VHRRIQGS-DFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSA 185
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 65/522 (12%)
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW-------------------------- 235
V SL+ MY +CGE+ D +F+ MP +D +SW
Sbjct: 90 VVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYES 149
Query: 236 ----------TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCE 265
T ++ C +E +AL+ Y C
Sbjct: 150 GIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSS 209
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R++FD+ S NV W ++ISG + EE++ L + + +S T+ S+
Sbjct: 210 GRRVFDEMSE------KNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSS 263
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L AC L R Q+HGL+ G D + S L+D+Y++ G+++ A ++F +
Sbjct: 264 LMACSGLQAI--REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEV 321
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D V+ + +++G ++G + +F M+ + ++ +IS++L V SL GKQ+H
Sbjct: 322 DEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIH 381
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ +K+ F LI+MY KCG++DD + +F +MP+R+ VSW +I ++G
Sbjct: 382 SLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGS 441
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ ++EM + P ++TFL +L AC H GLVE+ SM +YG+ P +EHY C+
Sbjct: 442 RALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACV 501
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD++G+AG ++A++ I +P KP +W ++L AC H N+++ A QL +PE P
Sbjct: 502 VDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESP 561
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+ Y++L+N+Y++ G W ++ K K +G K+ G+SWIE+
Sbjct: 562 APYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEI 603
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 223/550 (40%), Gaps = 110/550 (20%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIK-YG---------LSQDIFTGNNLLSMYADFTSLNDAHK 59
L CG+ + G SLH IIK +G L I N+LLSMY+ L DA K
Sbjct: 51 LSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATK 110
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+FD M K+ +SW + ++ N R++ + E G + + + VL AC
Sbjct: 111 VFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPE 170
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYS-----NWAASAY 172
+ ++IH + E + + N L+ Y +CG S R++FD+ S W A
Sbjct: 171 FCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVIS 230
Query: 173 G---------NVALWNSMLSG------------------------GKQVHAFCVKRGFEK 199
G ++ L+ M G G+Q+H K G
Sbjct: 231 GLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHF 290
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ ++L+DMY KCG ++D +F E D VS T I+VG +
Sbjct: 291 DLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQ--------------- 335
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
N EE+I + + +G+ ID
Sbjct: 336 -------------------------------------NGFEEESIQVFVKMVKNGVVID- 357
Query: 320 YTFTSALKACINLLNFNSRFAL--QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+ + A + + ++ AL Q+H LI+ + +Y V + LI++Y++ G++ +++
Sbjct: 358 ---PNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIK 414
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F +P+++ V+W+ +I +HG S A L+ +M S+L C+ +
Sbjct: 415 IFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGL 474
Query: 438 LRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD-VVSWTGII 495
+ +G + + G ++DM + G +++ + +PE+ ++ W ++
Sbjct: 475 VEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 534
Query: 496 VGCGQNGRAK 505
C +G ++
Sbjct: 535 GACSIHGNSE 544
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 180/448 (40%), Gaps = 109/448 (24%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C + K +H + YG ++I GN L++ Y + ++F
Sbjct: 155 DQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVF 214
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DEM+ KN+V+WT +++ + + +++L+ M + G V+PN Y + L ACS +
Sbjct: 215 DEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRD-GPVDPNSLTYLSSLMACSGLQAI 273
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLF------DQYS-------- 165
GR IH + + + +D + + L+DMY KCGSL K+F D+ S
Sbjct: 274 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 333
Query: 166 -------------------------NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKE 200
N ++ G + ++ L+ GKQ+H+ +K+ F
Sbjct: 334 AQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGI-DTSLALGKQIHSLIIKKSFGSN 392
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
LI+MY KCG++DD + +F +MP+R+ VSW +I
Sbjct: 393 YFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIA-------------------- 432
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
A + +GN A+ L + G+
Sbjct: 433 ----------------AFARHGN----------------GSRALQLYEEMRLEGVWPTDV 460
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVKS 374
TF S L AC ++ L G+ DY +G + +D+ R G +
Sbjct: 461 TFLSLLHACAHV-------GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNE 513
Query: 375 ALELFHRLPKKD-VVAWSGLIMGCTKHG 401
A + RLP+K ++ W L+ C+ HG
Sbjct: 514 AKKFIERLPEKPGILVWQALLGACSIHG 541
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 14/232 (6%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKED---------ITLTSLIDMYLK 469
+NQ IS +L +C L G +HA +K GF + + SL+ MY +
Sbjct: 42 INQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSR 101
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL-KPNEITFLG 528
CGE+ D +F MP +D +SW I G NG + F+++ +S + + ++ T
Sbjct: 102 CGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTT 161
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
VL+AC + I S+ YG E + ++ + GC ++ EM K
Sbjct: 162 VLTACDKPEFCYVSKMIH-SLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK 220
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGM 640
+ W +++ + S+ + P DP+ LS++ A G+
Sbjct: 221 -NVVTWTAVISGL-SQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGL 270
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 281/555 (50%), Gaps = 75/555 (13%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF------------ 226
N+ LS GK++H +K F + +TSLI+MY KC ID L +FNF
Sbjct: 42 NANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYN 101
Query: 227 ----------MPER---------------DVVSWTGIIVGC------------------- 242
+P+R D ++ +I C
Sbjct: 102 ALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKV 161
Query: 243 -FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
E F SALV+ Y + EA ++F++ +V LWN+M++G+ + E
Sbjct: 162 GLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR------DVVLWNAMVNGFAQIGRFE 215
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ + + +G+ YT T L + +F++ A VHG + GYE +V +
Sbjct: 216 EALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRA--VHGFVTKMGYESGVVVSNA 273
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+Y + V AL +F + + D+ +W+ ++ + G + LF M+ S++
Sbjct: 274 LIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQP 333
Query: 422 QFI-ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE-------DITLT-SLIDMYLKCGE 472
+ +++VL C+ LA+L G+++H + V G KE D+ L +L+DMY KCG
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGN 393
Query: 473 IDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+ D +F M E+DV SW +I G G +G EA+ F M Q+++ PNEI+F+G+LSA
Sbjct: 394 MRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSA 453
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C HAG+V+E + M+ +YG+ P +EHY C++D+L +AG +A L+ MPFK D
Sbjct: 454 CSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPV 513
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
W S+L AC HN+T L + A +++ P+ YV++SNVY +G ++ + + R K
Sbjct: 514 GWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMK 573
Query: 653 KLG-EKKAGMSWIEV 666
+ +K+ G SWIE+
Sbjct: 574 QQNVKKRPGCSWIEL 588
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/553 (22%), Positives = 222/553 (40%), Gaps = 114/553 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + L+ C ++ +GK LH ++K +L++MY+ + ++ + ++F
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 62 D--EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
+ KN+ ++ ++ + +N P A+ LYN M G + P+ F + V++AC
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLG-IAPDKFTFPCVIRACGDDD 146
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
D + IH + + LE D + + L++ Y+K R + + Y + +V LWN
Sbjct: 147 DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLK----FRFVGEAYRVFEELPVRDVVLWN 202
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
+M++G G+ VH F K
Sbjct: 203 AMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKM 262
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G+E V +LIDMY KC + D L++F M E D+ SW I+
Sbjct: 263 GYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIM---------------S 307
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
++ C YG + L++ M+ SS +
Sbjct: 308 VHERC-----------------GDHYGTLRLFDRMMG-------------------SSRV 331
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--------DYIVGSNLIDLYA 367
D T T+ L AC +L ++HG +V +G D ++ + L+D+YA
Sbjct: 332 QPDLVTVTTVLPACTHLAAL--MHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYA 389
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ GN++ A +F + +KDV +W+ +I G HG A +F M + N+
Sbjct: 390 KCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVG 449
Query: 428 VLKVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-E 485
+L CS ++ G + K G T +IDM + G++ + L MP +
Sbjct: 450 LLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFK 509
Query: 486 RDVVSWTGIIVGC 498
D V W ++ C
Sbjct: 510 ADPVGWRSLLAAC 522
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 193/669 (28%), Positives = 327/669 (48%), Gaps = 68/669 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ T N++LS A +++A LFD M +N VSW M+ A + + R A L++ M
Sbjct: 47 RNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRM 106
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ F ++ ++ + +G+L+L R + +R+ +K T N ++ Y K G
Sbjct: 107 PSR-----DDFSWTVMVSCYARAGELELARDVLDRMPGDKC---TACYNAMISGYAKNG- 157
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF-CVKRGFEKEDVTLTSLIDM 210
+ D ++ WNS L+G G+ V A EK+ V+ +++
Sbjct: 158 ---RFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEG 214
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN--------CNV 262
+++ G++D + F + +VVSW ++ G C +S D++ CNV
Sbjct: 215 FVRAGDLDAAASFFGRIESPNVVSWVTLLNGY--CRAGRISDARDLFDRMPERNVVACNV 272
Query: 263 LC----------EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+ EA KLFD+ N W ++ISG + +EA LL +
Sbjct: 273 MLDGYVRLSRLEEACKLFDEMPG------KNSISWTTIISGLARAGKLQEAKDLLDKM-- 324
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRF--ALQVHGLI----VTSGY-------------- 352
S C+ + T N++N + ++VH + + SGY
Sbjct: 325 SFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQ 384
Query: 353 ---ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
D + + +I YA+ G ++ A+ +F R+ +K+ V+W+ +I G ++GL A+
Sbjct: 385 RMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHH 444
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK 469
F M + +S L+ C+ LA+L G+Q+H+ V+ G + +LI Y K
Sbjct: 445 FMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAK 504
Query: 470 CGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGV 529
CG + + +F M +D+VSW ++ G NG+ EAI+ F+EM + ++P+E+TF+G+
Sbjct: 505 CGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGI 564
Query: 530 LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKP 589
LSAC AGL++E F SM EY L+P EHY CM DLLG+AG ++A +L+ M +P
Sbjct: 565 LSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQP 624
Query: 590 DKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK 649
+ +W ++L AC+ + N +L + AE+L P S YV+LSN+ A G WD K R
Sbjct: 625 NAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARA 684
Query: 650 AGKKLGEKK 658
+ K+ G K
Sbjct: 685 SIKEKGANK 693
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 234/568 (41%), Gaps = 92/568 (16%)
Query: 34 LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYN 93
+ +D+ + N +L + L+ A F + N+VSW T++ Y R + A L++
Sbjct: 201 VEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFD 260
Query: 94 HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE-RITREKLEYDTVLMNTLLDMYVK 152
M E V N L G + L RL ++ E +++ T++ +
Sbjct: 261 RMPERNVVACN----------VMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLAR 310
Query: 153 CGSL--TRKLFDQYS---NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKED-VTLTS 206
G L + L D+ S A +A + L +M++ +Q+ G E D V +
Sbjct: 311 AGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIF-----DGMEVHDTVCWNT 365
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+I Y++ G +++ + LF MP +D VSW +I G Y+ + +A
Sbjct: 366 MISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAG---------------YAQGGQMRKA 410
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+F + S N WNS+ISG+V N +A + D T+ S L
Sbjct: 411 IGIFRRMSR------KNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCL 464
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+AC NL + Q+H L+V SG+ D + LI YA+ G + A ++F + KD
Sbjct: 465 RACANLAALH--VGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKD 522
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ L+ G +G + A +FR+M + N
Sbjct: 523 IVSWNALVDGYASNGQGTEAISVFREM-----EAN------------------------- 552
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC-----GQN 501
G +++T ++ + G ID+GL F M E + C G+
Sbjct: 553 -----GVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRA 607
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP-HLE 560
G+ EA Q M +++PN + +L AC+ E A + LEP
Sbjct: 608 GKLNEAFELVQGM---QIQPNAGVWGALLGACQMYKNHELARLAAEKLSE---LEPCRAS 661
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+Y + ++ +AG +D+AE+ A + K
Sbjct: 662 NYVLLSNISAEAGKWDEAEKARASIKEK 689
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C ++ G+ LH +++ G D+F N L+S YA + +A ++FDEM K+I
Sbjct: 464 LRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDI 523
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +V Y SN + AI ++ M E V P+ + +L ACS +G +D G
Sbjct: 524 VSWNALVDGYASNGQGTEAISVFREM-EANGVRPDEVTFVGILSACSRAGLIDEGLGFFN 582
Query: 130 RITRE 134
+T E
Sbjct: 583 SMTEE 587
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 157/435 (36%), Gaps = 127/435 (29%)
Query: 27 CRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPN 86
C++ ++ + ++S A L +A L D+M+ + + T ++ Y N
Sbjct: 287 CKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVN 346
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A ++++ M + +V N + V + G L+ L+ +R+ + DTV NT+
Sbjct: 347 DARQIFDGMEVHDTVCWNTMISGYVQR-----GMLEEAMLLFQRMPNK----DTVSWNTM 397
Query: 147 LDMYVKCGSLTRK--LFDQYSNWAASAYGNVALWNSMLSG-------------------- 184
+ Y + G + + +F + S N WNS++SG
Sbjct: 398 IAGYAQGGQMRKAIGIFRRMSR------KNTVSWNSVISGFVQNGLFVDAFHHFMLMRRG 451
Query: 185 ------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDG 220
G+Q+H+ V+ G + +LI Y KCG + +
Sbjct: 452 TNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEA 511
Query: 221 LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASA 280
+F+ M +D+VSW +ALVD
Sbjct: 512 KQIFDEMVGKDIVSW---------------NALVD------------------------- 531
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
GY N Q EAI++ + ++G+ D TF L AC SR
Sbjct: 532 ------------GYASNGQGTEAISVFREMEANGVRPDEVTFVGILSAC-------SRAG 572
Query: 341 LQVHGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGL 393
L GL +T Y L + + + DL R G + A EL + + + W L
Sbjct: 573 LIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGAL 632
Query: 394 IMGCTKHGLNSLAYL 408
+ C + + LA L
Sbjct: 633 LGACQMYKNHELARL 647
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFE----KEDITLTSLIDMYLKCGEIDDGLALFKFM 483
V + L L R Q+ A +R F+ + +T S++ + G ID+ ALF M
Sbjct: 18 VFRSNQELTRLARSGQLAA--ARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGM 75
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
P R+ VSW +I +GR +A F M SR ++ ++ ++S AG +E A
Sbjct: 76 PSRNAVSWNAMIAALSDHGRVADARGLFDRM-PSR---DDFSWTVMVSCYARAGELELAR 131
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ M + Y M+ + G FDDA +L+ EMP PD W S L
Sbjct: 132 DVLDRMPG----DKCTACYNAMISGYAKNGRFDDAVKLLREMP-APDLFSWNSAL 181
>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
Length = 883
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 196/650 (30%), Positives = 328/650 (50%), Gaps = 48/650 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+++GK +H R + GLS I N L+SMY L+ A ++F ++ ++VSWT ++
Sbjct: 259 SLEEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIV 318
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
AYT + R A+ LY M E +EP+ +++VL ACS + DL+LG+ +H R+ K
Sbjct: 319 AYTQHGRNREALELYKQM-EGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDG 377
Query: 138 Y-DTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ------- 187
+ D VL+ L++MYVKCG L+ ++F + A V +WN+M++ +Q
Sbjct: 378 FSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKA-----VVVWNAMITAYEQEGYSRAA 432
Query: 188 --VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
++ +RG + ++ TL+S++ C E+ D + + + V I+ +C
Sbjct: 433 VDLYDMMKQRGLDPDESTLSSILS---ACAELKD-------LEKGEQVHVE--IIASRDC 480
Query: 246 S--CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S L+AL+ MY++C + EA+ +F + + +V W +IS YV A
Sbjct: 481 SQNPVVLNALISMYASCGEIREAKAVFKRMKNR------DVVSWTILISAYVQGGDARRA 534
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
+ L + G+ T + + AC + + + +H L S + D V + LI
Sbjct: 535 LRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWE--GIVIHAL-TDSMFFTDTAVQAALI 591
Query: 364 DLYARLGNVKSALELFHRLPKKDVVA--WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+YAR + A ++F ++ + A W+ ++ ++ GL L+ +M ++ N
Sbjct: 592 SMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKAN 651
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ + L CS L ++R G ++H + + T+L+ MY KC +D +F+
Sbjct: 652 EGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFE 711
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ + DVV+W +I QNG A A+ + +M+ KP E TFL V AC HAGLV+E
Sbjct: 712 QL-QPDVVAWNAMIAAYAQNGYAWHALELYSKMLHG-YKPLEPTFLCVFLACGHAGLVDE 769
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F SM E + P +HY C+V +L +AG ++AE L+ MPF P W S+L AC
Sbjct: 770 CKWYFQSM-IEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGAC 828
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV--YATLGMWDSLSKVRK 649
TH + K A++ + +D + YV+LSNV +A G D L K K
Sbjct: 829 RTHGDLKRARRAADEAMELDRQDSAPYVLLSNVNIFAASGCLDHLRKKTK 878
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 269/537 (50%), Gaps = 41/537 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+HCG ++ QG+ +H I+ GL+ D F G++LL MY S++DA ++F + R+++
Sbjct: 52 LKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSL 111
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
SW ++ A+ N+ AI ++ M G ++P+ S+VL ACS DL+ GR IH
Sbjct: 112 FSWNFIIAAFAKNRHGRKAIEMFRSMDSAG-IKPDSATLSSVLGACSSLRDLEEGRRIHG 170
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS---- 183
RI+ + + V+ L+ MY +CG L R++FD+ N +V WNSM++
Sbjct: 171 RISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIEN------KDVICWNSMIAAYAQ 224
Query: 184 GGK--QVHAFCVKR---GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
GG Q C + G + D T ++ C +++G + + R + S
Sbjct: 225 GGHSAQARQLCEEMEGFGVKASDTTFAGILG---ACSSLEEGKKIHSRALARGLSS---- 277
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
S +AL+ MY CN L AR++F + + +V W ++I Y +
Sbjct: 278 -------SIIVQNALISMYGKCNELDAARRVFSKVRAH------DVVSWTALIVAYTQHG 324
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
+N EA+ L + GM D TFTS L AC N + AL L G+ D ++
Sbjct: 325 RNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFS-DGVL 383
Query: 359 GSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
+ LI++Y + G + + E+F K VV W+ +I + G + A L+ M
Sbjct: 384 VAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRG 443
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
D ++ +SS+L C+ L L +G+QVH R + + L +LI MY CGEI +
Sbjct: 444 LDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREA 503
Query: 477 LALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
A+FK M RDVVSWT +I Q G A+ A+ ++ M+ ++P E+T L V++AC
Sbjct: 504 KAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAAC 560
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 163/605 (26%), Positives = 263/605 (43%), Gaps = 51/605 (8%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C R +++G+ +H RI I L+ MYA L +A ++FD + K+++ W
Sbjct: 156 CSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICW 215
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M+ AY A +L M +G V+ + ++ +L ACS L+ G+ IH R
Sbjct: 216 NSMIAAYAQGGHSAQARQLCEEMEGFG-VKASDTTFAGILGACS---SLEEGKKIHSRAL 271
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAYGNVALWNSMLS 183
L ++ N L+ MY KC L R++F + +W A AY L
Sbjct: 272 ARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALE 331
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
KQ+ G E + VT TS++ +++ G AL + R G++V
Sbjct: 332 LYKQMEG----EGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLV--- 384
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+AL++MY C L + ++F A V +WN+MI+ Y + A
Sbjct: 385 -------AALINMYVKCGRLDLSSEIFQSCKDTKA-----VVVWNAMITAYEQEGYSRAA 432
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS-GYELDYIVGSNL 362
+ L + G+ D T +S L AC L + QVH I+ S + +V + L
Sbjct: 433 VDLYDMMKQRGLDPDESTLSSILSACAELKDLEK--GEQVHVEIIASRDCSQNPVVLNAL 490
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I +YA G ++ A +F R+ +DVV+W+ LI + G A L+R M+ +
Sbjct: 491 ISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTE 550
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ +V+ CS + SL G +HA F + +LI MY +C +D +F+
Sbjct: 551 VTMLAVIAACSAMESLWEGIVIHAL-TDSMFFTDTAVQAALISMYARCRRLDLACQVFRQ 609
Query: 483 MP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ E W ++ Q G +E I + EM + +K NE TF G L+AC G V
Sbjct: 610 VRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVR 669
Query: 541 EAWTIFTSM-----KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
E + I + + L+ L H Y + + A F EQL +PD W
Sbjct: 670 EGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAA--FHVFEQL------QPDVVAWN 721
Query: 596 SMLKA 600
+M+ A
Sbjct: 722 AMIAA 726
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 45/379 (11%)
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T+ + LK C N ++H IV SG D +G +L+ +Y + G+V A+++FH
Sbjct: 47 TYAALLKHCGNAAALPQ--GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFH 104
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
LP++ + +W+ +I K+ A +FR M ++ + +SSVL CS L L
Sbjct: 105 ALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEE 164
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+++H F+ + T L+ MY +CG + + +F + +DV+ W +I Q
Sbjct: 165 GRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQ 224
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
G + +A +EM +K ++ TF G+L AC +EE I S GL +
Sbjct: 225 GGHSAQARQLCEEMEGFGVKASDTTFAGILGACSS---LEEGKKIH-SRALARGLSSSII 280
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMP---------------------------------- 586
++ + G+ D A ++ +++
Sbjct: 281 VQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEG 340
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP--EDPSKYVMLSNVYATLGMWDSL 644
+PDK + S+L AC N+ +L + +LLA D L N+Y G D
Sbjct: 341 MEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLS 400
Query: 645 SKVRKAGKKLGEKKAGMSW 663
S++ ++ K + KA + W
Sbjct: 401 SEIFQSCK---DTKAVVVW 416
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 240/427 (56%), Gaps = 11/427 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
FE L+ +++MY+ C L EA+ LFD+ + ++ W +ISGY + Q E
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT------KDMVSWTVLISGYSQSGQASE 189
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + G + +T +S LKA + Q+H + GY+++ VGS+L
Sbjct: 190 ALALFPKMLHLGFQPNEFTLSSLLKASGT--GPSDHHGRQLHAFSLKYGYDMNVHVGSSL 247
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YAR +++ A +F+ L K+VV+W+ LI G + G LF M+ +
Sbjct: 248 LDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTH 307
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F SSVL C+ SL +GK VHA +K G + +LIDMY K G I D +F+
Sbjct: 308 FTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRR 366
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ ++D+VSW II G Q+G EA+ F++M++++++PNEITFL VL+AC H+GL++E
Sbjct: 367 LVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG 426
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK ++ +E + H+ +VDLLG+AG ++A + I EMP KP +W ++L AC
Sbjct: 427 QYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACR 485
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N L AEQ+ P D +V+LSN+YA+ G +KVRK K+ G KK
Sbjct: 486 MHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPAC 545
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 546 SWVEIEN 552
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 160/316 (50%), Gaps = 8/316 (2%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
++ L C L A+ H I +S +E D ++ + ++++YA+ G+++ A +LF +
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAH--IQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDK 165
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P KD+V+W+ LI G ++ G S A LF M++ N+F +SS+LK S G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+HAF +K G++ +SL+DMY + + + +F + ++VVSW +I G +
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLE 560
G + + F +M++ +P T+ VL AC +G +E+ W +K G +P
Sbjct: 286 GEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKS--GGQPIAY 342
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
++D+ ++G DA+++ + K D W S++ H + EQ+L
Sbjct: 343 IGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 401
Query: 621 SPEDPSKYVMLSNVYA 636
+ P++ LS + A
Sbjct: 402 KVQ-PNEITFLSVLTA 416
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 178/439 (40%), Gaps = 111/439 (25%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C R +KQG+++H I D+ N +L+MYA SL +A LFD+M K++
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDM 171
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT +++ Y+ + + + A+ L+ ML G +PN F S++LKA GR +H
Sbjct: 172 VSWTVLISGYSQSGQASEALALFPKMLHLG-FQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
+ + + + ++LLDMY + + R+ +++ AA NV WN++++G
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHM-REAKVIFNSLAAK---NVVSWNALIAGHARKG 286
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GK VHA +K G + +
Sbjct: 287 EGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 346
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LIDMY K G I D +F + ++D+VSW II G Y+ + EA
Sbjct: 347 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG---------------YAQHGLGAEA 391
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+LF+Q M+ V + NE TF S L
Sbjct: 392 LQLFEQ-----------------MLKAKV--QPNE------------------ITFLSVL 414
Query: 327 KACIN--LLNFNSRF--ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
AC + LL+ + ++ H + + + ++DL R G + A + +
Sbjct: 415 TACSHSGLLDEGQYYFELMKKHKIEAQVAHHV------TVVDLLGRAGRLNEANKFIEEM 468
Query: 383 PKKDVVA-WSGLIMGCTKH 400
P K A W L+ C H
Sbjct: 469 PIKPTAAVWGALLGACRMH 487
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 202/695 (29%), Positives = 339/695 (48%), Gaps = 64/695 (9%)
Query: 1 MDLRRIVEALRHCGQRRS--IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTS--LND 56
M + +E LR RR+ + G++LH +K G + N+L++ Y+ L
Sbjct: 12 MSHTQFIELLR----RRASCPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAA 67
Query: 57 AHKLFDEM--ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
A +FD++ A +++ SW +++ S RP A+ + ML +V P+ ++A A
Sbjct: 68 AFAVFDDIPPAARDVTSWNSLLNPL-SGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTA 126
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNT-LLDMYVKCG--SLTRKLFDQYSNWAASA 171
+ + G H + V + T LL+MY K G S R++FD
Sbjct: 127 AARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQR---- 182
Query: 172 YGNVALWNSMLSGGKQVHAFCVKRGF------------EKEDVTLTSL-----IDMYLKC 214
N W++M++G C + F EK + T++ + + L
Sbjct: 183 --NSFSWSTMVAG--YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM 238
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
GE GL + + + D VS ++LV MY+ + A +F+
Sbjct: 239 GEQMHGLIVKDGL--LDFVS--------------VENSLVTMYAKAGCMGAAFHVFE--- 279
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
+S N W++MI+GY N + + A+++ S +H++G +TF L A +L
Sbjct: 280 ---SSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
Q HGL+V G+E+ V S L+D+YA+ G + A E F +L + D+V W+ ++
Sbjct: 337 LA--VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMV 394
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++G + A L+ M ++ I+S L+ C+ +A+L GKQ+H VK G
Sbjct: 395 SGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLG 454
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
++L MY KCG ++DG+++F+ +P+RDV++W II G QNG A+ F+EM
Sbjct: 455 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
P+ ITF+ +L AC H GLV+ W F+ M +YGL P L+HY CMVD+L +AG
Sbjct: 515 KMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGM 574
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+A+ I + +W +L AC + + + + E+L+ D S Y++LSN+
Sbjct: 575 LKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNI 634
Query: 635 YATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YA+ W+ + +VR + G K G SW+E++S
Sbjct: 635 YASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNS 669
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 193/700 (27%), Positives = 301/700 (43%), Gaps = 149/700 (21%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P+ + VL +CS GD+ GR +HERI + E DT++ N L+ MY KC SL R
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 160 LFDQYSNWAASAYGNVALWNSM-------------------------------------- 181
+F+ +W NV WN+M
Sbjct: 64 VFESM-DWRQR---NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119
Query: 182 ---LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS---- 234
L+ G+++H G + +L+ MY + G + D +F + RD S
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179
Query: 235 ---------WTG-----------------------------------------IIVGCFE 244
W+G I+ F+
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+AL++MY C EAR++FD+ ++ WN MI YVLN EA+
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKK------RDMVSWNVMIGCYVLNGDFHEAL 293
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G TF S L AC ++ VH I+ G + + V + L++
Sbjct: 294 ELYQKLDMEGFKRTKATFVSILGACSSVKALAQ--GRLVHSHILERGLDSEVAVATALVN 351
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNS-------------------- 404
+YA+ G+++ A ++F+ + +D VAWS LI +G
Sbjct: 352 MYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISW 411
Query: 405 --------------LAYLLFRDMINS---NQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
A +FR+M + D FI +VL+ C+ L L K +HA
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFI--AVLEACASLGRLSEVKALHAQ 469
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+ E + +LI+MY +CG +++ LF E+ VVSWT ++ Q GR EA
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ FQEM +KP+++T+ +L C H G +E+ W FT M + L P +H+ MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG++G DA++L+ MPF+PD W + L AC H +L AE++ P +
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
Y+ +SN+YA GMW+ ++ VRK ++ G KK G+S+IEV
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEV 689
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 247/541 (45%), Gaps = 89/541 (16%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QG+ +H R+ GL N L++MYA F S+ DA ++F + ++ SW ++
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
A++ + + A+R++ M V+PN Y V+ S L GR IH I +
Sbjct: 182 AHSQSGDWSGALRIFKEM--KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM-------------- 181
D V+ L++MY KCGS R++FD+ ++ WN M
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKK------RDMVSWNVMIGCYVLNGDFHEAL 293
Query: 182 ------------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMY 211
L+ G+ VH+ ++RG + E T+L++MY
Sbjct: 294 ELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMY 353
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
KCG +++ +FN M RD V+W+ +I G + + + A +ARK+FD
Sbjct: 354 AKCGSLEEARKVFNAMKNRDAVAWSTLI-GAYASNGYGKDAR-----------KARKVFD 401
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACI 330
+ S + WN+MI+ YV N A+ + + ++G+ D+ TF + L+AC
Sbjct: 402 RLGS------RDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACA 455
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+L + AL H I S E + +V + LI++YAR G+++ A LF +K VV+W
Sbjct: 456 SLGRLSEVKAL--HAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-------KQ 443
+ ++ +++G + A LF++M + +S+L VC+ SL +G +
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNG 502
+HA +++D+ + G + D L + MP E D V+W + C +G
Sbjct: 574 LHALAPTADH------FAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHG 627
Query: 503 R 503
+
Sbjct: 628 K 628
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 61/311 (19%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V L C +++ QG+ +H I++ GL ++ L++MYA SL +A K+F+ M
Sbjct: 311 FVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK 370
Query: 66 RKNIVSWTTMVTAYTSN-------------------KRPNW---------------AIRL 91
++ V+W+T++ AY SN +W A+++
Sbjct: 371 NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKI 430
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ M ++P+ + AVL+AC+ G L + +H +I+ +LE + V+ NTL++MY
Sbjct: 431 FREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYA 490
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK---------RGFEKE 200
+CGSL +LF AA+ V W +M++ Q + G + +
Sbjct: 491 RCGSLEEAERLF------AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
DVT TS++ + G ++ G F M E ++ T +A+VD+
Sbjct: 545 DVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTAD----------HFAAMVDLLGRS 594
Query: 261 NVLCEARKLFD 271
L +A++L +
Sbjct: 595 GRLFDAKELLE 605
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C + + K+LH +I + L ++ N L++MYA SL +A +LF
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
K +VSWT MV A++ R A+ L+ M + V+P+ Y+++L C+ G L
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM-DLEGVKPDDVTYTSILFVCTHGGSL 561
Query: 122 DLG 124
+ G
Sbjct: 562 EQG 564
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 287/579 (49%), Gaps = 46/579 (7%)
Query: 107 MYSAVLKACSLSGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL-TRKLFDQY 164
+ S V A S+ L LGR H +I + K + L N L++MY K L + KL +
Sbjct: 9 LASVVELAVSVRSSL-LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67
Query: 165 SNWAASAYGNVALWNSMLSGGKQVHAF-------------CVKRGFEKEDVTLTSLIDMY 211
+ + V W ++++G Q F CV+ D T ++
Sbjct: 68 APCRS-----VVTWTALIAGSVQNGCFVSALLHFSDMLSDCVR----PNDFTFPCVLKAS 118
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
G L + +++ + VGC ++ DMYS L +A K+FD
Sbjct: 119 TGLRMDTTGKQLHALAVKEGLIN--DVFVGC---------SVFDMYSKLGFLNDAYKVFD 167
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ + N+ WN+ IS VL+ + E+++ + G DS TF L AC +
Sbjct: 168 EMP------HRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSD 221
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L Q+HG I+ SGY + V + LID Y + G V+ + +F R+ +++ V+WS
Sbjct: 222 KLGLGP--GCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWS 279
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
LI ++ A LF + + F++SSVL C+ L+ + G+ V A VK
Sbjct: 280 SLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKA 339
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
E+ ++L+DMY KCG ID+ F MPER++VSW ++ G G A +A+A
Sbjct: 340 CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALL 399
Query: 512 QEMIQSR-LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+EM + + P+ ++ + LSAC AG ++ IF SMK YG+EP EHY C+VDLLG
Sbjct: 400 EEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLG 459
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+AG + A I MPF P +IW ++L AC H +L + AE+L P+D +V+
Sbjct: 460 RAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVV 519
Query: 631 LSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
LSN++A G W+ ++ VR K++G KK AG SWI V S
Sbjct: 520 LSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDS 558
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 173/435 (39%), Gaps = 108/435 (24%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
GK LH +K GL D+F G ++ MY+ LNDA+K+FDEM +N+ +W ++
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ RP ++ + +L G +P+ + L ACS L G +H I R +
Sbjct: 187 HGRPEDSVIAFIELLRVGG-KPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS 245
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYS-----NWAA--SAY------------------GN 174
+ N L+D Y KCG + + +FD+ +W++ +AY +
Sbjct: 246 VSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKED 305
Query: 175 VALWNSMLSG-------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
+ + M+S G+ V A VK E+ ++L+DMY KCG ID+
Sbjct: 306 IEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAE 365
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
FN MPER++VSW ++ G +A +
Sbjct: 366 QAFNAMPERNLVSWNALLGG----------------------------------YAHQGH 391
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY-TFTSALKACINLLNFNSRFA 340
N +A+ LL + S+ + SY + AL AC SR
Sbjct: 392 AN------------------KAVALLEEMTSAAGIVPSYVSLICALSAC-------SRAG 426
Query: 341 LQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPKKDVVA-WSGL 393
G+ + + Y V L+DL R G V+ A + R+P ++ W L
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486
Query: 394 IMGCTKHGLNSLAYL 408
+ C HG L L
Sbjct: 487 LGACRMHGKPELGKL 501
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + G LH II+ G Q++ N L+ Y + + +FD M +N
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW++++ AY N A L+ + +EP FM S+VL AC+ +++ GR +
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKE-DIEPTDFMVSSVLCACAGLSEIEFGRSVQA 334
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-GKQV 188
+ +E + + + L+DMY KCGS+ +Q N A N+ WN++L G Q
Sbjct: 335 LAVKACVEQNIFVASALVDMYGKCGSIDNA--EQAFN--AMPERNLVSWNALLGGYAHQG 390
Query: 189 HA---------FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
HA G V+L + + G++ G+ +F M ER
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKER 441
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 194/631 (30%), Positives = 306/631 (48%), Gaps = 104/631 (16%)
Query: 72 WTTMVTAYTSNKRPNWAIRLY--NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
++ M+ Y+ N + L+ H L ++ P F+Y ++K SG+L H
Sbjct: 68 YSCMLKYYSRMGAHNQVVSLFKCTHSL---NLRPQPFVYIYLIKLAGKSGNL-----FHA 119
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + D + N +LDMY K G L R LF+Q A +A WNSM+SG
Sbjct: 120 YVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQM------AERTLADWNSMISG--- 170
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
C K G E E V L FN MP R++++WT ++ G
Sbjct: 171 ----CWKSGNETEAVVL-------------------FNMMPARNIITWTSMVTG------ 201
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
Y+ L AR+ FD+ + V WN+M S Y E +EA+ L
Sbjct: 202 ---------YAKMGDLESARRYFDEMPERS------VVSWNAMQSAYAQKECPKEALNLF 246
Query: 308 SHIHSSGMCIDSYTFTSALKACIN----------------------------LLNFNSRF 339
+ G+ D T+ + +C + LL+ +++F
Sbjct: 247 HQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKF 306
Query: 340 A-LQVHGLIVTS-GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
L++ I G + + + + +I Y R+G + A ELF +PK+DVV+W+ +I G
Sbjct: 307 GNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGY 366
Query: 398 TKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
++G ++++ LF++MI S D+ ++ I+SVL C + +L+ V ++ +
Sbjct: 367 AQNGESAMSIELFKEMI-SCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKL 425
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
SLI MY KCG + D +F+ M RDVVS+ +I G NG KEAI M
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTME 485
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ ++P+ +T++GVL+AC HAGL+ E +F S++ P ++HY CMVDLLG+AG
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGEL 540
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A+ LI MP KP ++ S+L A H L + A +L P++ YV+LSN+Y
Sbjct: 541 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 600
Query: 636 ATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
A+ G W+ + +VR+ KK G KK+ GMSW+E
Sbjct: 601 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVE 631
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 173/399 (43%), Gaps = 54/399 (13%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
+++I T ++++ YA L A + FDEM +++VSW M +AY + P A+ L++
Sbjct: 189 ARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
MLE G + P+ + + +CS GD L I I ++ + ++ + LLDM+ K G
Sbjct: 249 MLEEG-ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSL 207
+L R +FD+ + N WN M+S +V + R +++ V+ S+
Sbjct: 308 NLEIARNIFDEL-----GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 208 IDMYLKCGEIDDGLALFNFM-----PERDVVSWTGIIVGCFECSCFTLS----------- 251
I Y + GE + LF M + D V+ ++ C LS
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 252 ---------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+L+ MYS C + +A ++F + +V +N++ISG+ N +E
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGT------RDVVSFNTLISGFAANGHGKE 476
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
AI L+ + G+ D T+ L AC LLN + V D+ +
Sbjct: 477 AIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTV------DHY--A 528
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
++DL R G + A L +P K G ++ ++
Sbjct: 529 CMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASR 567
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 36/340 (10%)
Query: 336 NSRFALQVHG-LIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWS 391
N R Q HG L+ S + +Y V LI+ L+A V S +F P D +S
Sbjct: 13 NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS---IFTSSPSPDASVYS 69
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ ++ G ++ LF+ + N F+ ++K+ + G HA+ +K
Sbjct: 70 CMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNLFHAYVLKL 124
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G + +++DMY K G++D LF+ M ER + W +I GC ++G EA+ F
Sbjct: 125 GHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLF 184
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M+ +R N IT+ +++ G +E A F M PE + + M Q
Sbjct: 185 N-MMPAR---NIITWTSMVTGYAKMGDLESARRYFDEM-PERSVVS----WNAMQSAYAQ 235
Query: 572 AGCFDDAEQLIAEM---PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
C +A L +M PD T W + +C + + L I + K+
Sbjct: 236 KECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMI-------DQKH 288
Query: 629 VMLSNVYATL-----GMWDSLSKVRKAGKKLGEKKAGMSW 663
++L++ T + +L R +LG ++ ++W
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTW 328
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G ++ T N ++S Y L+ A +LFD M ++++VSW +M+ Y N +I L+
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M+ ++P+ ++VL AC G L L + + + + ++ N+L+ MY K
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSK 439
Query: 153 CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAFCV---KRGFEKEDVT 203
CGS+ D + + +V +N+++SG GK+ + + G E + VT
Sbjct: 440 CGSVA----DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 204 LTSLIDMYLKCGEIDDGLALF 224
++ G +++G +F
Sbjct: 496 YIGVLTACSHAGLLNEGKNVF 516
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 236/428 (55%), Gaps = 10/428 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I + + F + LV MY C L +AR + D+ + V W +MISGY
Sbjct: 36 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS------VVSWTTMISGYSQT 89
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E++ EA+ L + +G + YT + L +C + QVH L+V + +E
Sbjct: 90 ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQ--GKQVHSLLVKTNFESHMF 147
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS+L+D+YA+ N++ A +F LP++DVV+ + +I G + GL+ A LFR + +
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 207
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N ++++ S LASL GKQVHA +++ SLIDMY KCG++
Sbjct: 208 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 267
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M ER VVSW +++G G++G E I+ F+++ +KP+ +T L VLS C H G
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGG 326
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV+E IF ++ E H HY C++DLLG++G + A LI MPF+ +IW S+
Sbjct: 327 LVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSL 386
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG-KKLGE 656
L AC H N + ++A++LL PE+ YV+LSN+YA GMW + KVRK +K
Sbjct: 387 LGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 446
Query: 657 KKAGMSWI 664
K+ G SWI
Sbjct: 447 KEPGQSWI 454
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 120/217 (55%), Gaps = 10/217 (4%)
Query: 320 YTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + +A+ ACI R AL QVH ++T+ Y +G+ L+ +Y R G + A
Sbjct: 11 HEYEAAITACIE------RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ R+P++ VV+W+ +I G ++ + A LF M+ + N++ +++VL CS
Sbjct: 65 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S+ +GKQVH+ VK FE +SL+DMY K I + +F +PERDVVS T II
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
G Q G +EA+ F+++ ++ N +TF +++A
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 221
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 177/446 (39%), Gaps = 120/446 (26%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C +RR++ +G+ +H R+I +F G L++MY +L+DA + D M ++
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTTM++ Y+ +R A+ L+ ML G + PN + + VL +CS + G+ +H
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASAYGN 174
+ + E + ++LLDMY K ++ R++FD S +A
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 175 VAL--------------------WNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLI 208
AL + LSG GKQVHA +++ SLI
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 254
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KCG++ +F+ M ER VVSW +++G
Sbjct: 255 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG--------------------------- 287
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
YG L E I+L +H + DS T + L
Sbjct: 288 ------------YGRHGL-------------GHEVISLFKDLHKE-VKPDSVTLLAVLSG 321
Query: 329 CINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN-----------LIDLYARLGNVKSAL 376
C HG +V G ++ D +V +IDL R G ++ AL
Sbjct: 322 C-------------SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368
Query: 377 ELFHRLPKKDVVA-WSGLIMGCTKHG 401
L +P + + W L+ C H
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHA 394
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 15/229 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C +SI QGK +H ++K +F G++LL MYA ++ +A ++FD +
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VS T +++ Y A+ L+ + G ++ N ++ ++ A S LD G+
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 232
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ-----YSNWAA--SAYGNVA 176
+H I R++L + L N+L+DMY KCG L +R++FD +W A YG
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
L + ++S K +H + + + VTL +++ G +D+GL +F+
Sbjct: 293 LGHEVISLFKDLH-----KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFD 336
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+ + C +L G+QVHA + + T L+ MY++CG +DD + MPER
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
VVSWT +I G Q R EA+ F +M+++ PNE T VL++C + + +
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
S+ + E H+ ++D+ ++ +A ++ +P
Sbjct: 135 -SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 310/656 (47%), Gaps = 93/656 (14%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P+ + A+L+ CS + ++D GR +H + E + ++ L+ MY +CGS+ ++
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 160 LFD---------------------------------QYSNWAASAYGNVALWNS-----M 181
+F+ Q + + VA+ N+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L G ++H +++GFE + T+LI+MY KCG + F + RDVVSWT +I
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 242 CFECSCF--------------------TLSALVDMYSNCNVLCEARKLFDQYSSW----- 276
C + F TL + + Y + + L E + ++ SS
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241
Query: 277 ------AASAYGNVAL------------------WNSMISGYVLNEQNEEAITLLSHIHS 312
A + +GN L WN +I+ YV NE EA+ L +
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ + TF L +L + +H L+ +GY+ D +V + L+ LY R
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAK--GKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A ++F + KDV+ W+ + + ++G A LF++M + + +VL C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LA+L++G+Q+H+ ++ GF E + T+LI+MY KCG++ + ++F+ M +RD++ W
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWN 479
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ Q+G E + F +M K + ++F+ VLSA H+G V + + F +M +
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 539
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF-KPDKTIWASMLKACETHNNTKLVS 611
+ + P E Y C+VDLLG+AG +A ++ ++ PD +W ++L AC THN T
Sbjct: 540 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 599
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
AEQ+L P YV+LSNVYA G WD ++++RK + G KK G S IE+
Sbjct: 600 AAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEI 655
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 201/752 (26%), Positives = 341/752 (45%), Gaps = 110/752 (14%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C Q S++ + + II GLS++IF + L+S YA + N + ++F + R++I W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+++ A+ SN ++ + ML G P+ F V+ AC+ +G +H +
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQ-SPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 133 REK-LEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSN-----WAASAYGNVALWNS---- 180
+ + +T + + + Y KCG L +FD+ + W A G+V S
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 181 --------------------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
L G+ +H F VK G +S+
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWT------------------------------GI 238
Y K G + F + + D+ SWT G+
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 239 IVGCFECS--------------------CFTL-----SALVDMYSNCNVLCEARKLFDQY 273
++ C CF+L ++L+ MY +L A KLF +
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI 392
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
S GN WN+M+ GY + + + I L I + G+ IDS + TS + +C ++
Sbjct: 393 SE-----EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
+H +V + +L V ++LIDLY ++G++ A +F +V+ W+ +
Sbjct: 448 AV--LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAM 504
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I + A LF M++ N + + ++L C SL RG+ +H + +
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
E +LIDMY KCG ++ LF ++D V W +I G G +G + AIA F +
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQ 624
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
M +S +KP TFL +LSAC HAGLVE+ +F M +Y ++P+L+HY C+VDLL ++G
Sbjct: 625 MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSG 683
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSN 633
++AE + MPF PD IW ++L +C TH ++ +AE+ +A+ P++ Y+ML+N
Sbjct: 684 NLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLAN 743
Query: 634 VYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+Y+ G W+ + R+ ++ G K+AG S +
Sbjct: 744 MYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 19/243 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + C ++ GKSLHC ++K L I N+L+ +Y L A ++
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F E A N+++W M+ +Y ++ AI L++ M+ + +P+ +L AC +G
Sbjct: 491 FCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMACVNTGS 548
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
L+ G++IH IT + E + L L+DMY KCG L +R+LFD A + W
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD------AGNQKDAVCW 602
Query: 179 NSMLSG----GKQVHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPE 229
N M+SG G A + E+ DV T +L+ G ++ G LF M +
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ 662
Query: 230 RDV 232
DV
Sbjct: 663 YDV 665
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C S+++G+ +H I + ++ L+ MYA L + +LFD
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+K+ V W M++ Y + AI L++ M E V+P G + A+L AC+ +G ++ G+
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL 156
+ ++ + ++ + + L+D+ + G+L
Sbjct: 655 KLFLKMHQYDVKPNLKHYSCLVDLLSRSGNL 685
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 1/170 (0%)
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
+C SL ++ +A + G + + LI Y G+ + +F + RD+
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W II NG ++ +F M+ S P+ T V+SAC + +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
G + + V + G DA + EMP + D W +++
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR-DVVAWTAIISG 201
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 260/523 (49%), Gaps = 64/523 (12%)
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS--------------- 246
V T+LI Y G I + LF+ MPERDVV+WT +I G C+
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 247 -----CFTLS-----------------------------------ALVDMYSNCNVLCEA 266
FT+S AL+DMY+ C V
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCV---- 159
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ D + N W ++I+GY + + + + + ++ ++F+ A+
Sbjct: 160 -SMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAV 218
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
+AC ++ + F Q+H + G+E + V ++++D+Y R A F+ + ++D
Sbjct: 219 RACTSIGSHT--FGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRD 276
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
++ W+ LI G + Y+ F M + N F +S++ C+ LA L G+Q+H
Sbjct: 277 LITWNTLIAGYERSNPTESLYV-FSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHG 335
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++RG + +LIDMY KCG I D +F M RD+VSWT +++G G +G +E
Sbjct: 336 RIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEE 395
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M++S ++P+ + F+ +LSAC HAGLV+E F M +Y + P E Y C+V
Sbjct: 396 AVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVV 455
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AG ++A +LI MPFKPD+ +W L AC+ H L + A ++L P
Sbjct: 456 DLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAG 515
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
YVMLSN+YA G W +++RK K++G KK G SW+EV +
Sbjct: 516 TYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGN 558
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 180/447 (40%), Gaps = 101/447 (22%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEM 64
I L+ C + + G+ +H IK+GL I+ N L+ MYA S++DA +F +
Sbjct: 112 ISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGI 171
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
KN VSWTT++ YT +R++ ML VE N F +S ++AC+ G G
Sbjct: 172 HLKNEVSWTTLIAGYTHRDDGYGGLRVFRQML-LEEVELNPFSFSIAVRACTSIGSHTFG 230
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT---RKLFD----------------QYS 165
+H +T+ E + +MN++LDMY +C + R ++ + S
Sbjct: 231 EQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERS 290
Query: 166 NWAASAY-----------GNVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLT 205
N S Y N + S+++ G+Q+H ++RG +
Sbjct: 291 NPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSN 350
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
+LIDMY KCG I D +F M RD+VSWT +++G
Sbjct: 351 ALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIG------------------------ 386
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ YG EEA+ L + SG+ D F +
Sbjct: 387 ----------YGTHGYG------------------EEAVELFDKMVRSGIRPDRVVFMAI 418
Query: 326 LKAC--INLLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
L AC L++ R F L V ++ E+ V +DL R G V+ A EL +
Sbjct: 419 LSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCV----VDLLGRAGKVEEAYELIESM 474
Query: 383 P-KKDVVAWSGLIMGCTKHGLNSLAYL 408
P K D W + C H +L L
Sbjct: 475 PFKPDECVWGPFLGACKAHTFPNLGKL 501
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 275/541 (50%), Gaps = 72/541 (13%)
Query: 174 NVALWNSMLSG-------GKQVHAFC--VKRGFEKEDVTLTSLI-----DMYLKCG-EID 218
N +WN+M+ G V +C ++RG ++ T L+ D +KCG E+
Sbjct: 83 NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142
Query: 219 DGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAA 278
D + F + F +AL+ +YS + AR +FD+
Sbjct: 143 DHIVKLGF-----------------SSNVFVQNALIHLYSLSGEVSVARGVFDR------ 179
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSR 338
S+ G+V WN MISGY ++Q +E++ L + + S T S L AC L + N
Sbjct: 180 SSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLN-- 237
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+VH + E ++ + LID+YA G++ +AL +F + +DV++W+ ++ G T
Sbjct: 238 VGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFT 297
Query: 399 KHGLNSLA---------------------YL----------LFRDMINSNQDVNQFIISS 427
G LA YL LFR+M +N ++F + S
Sbjct: 298 NLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVS 357
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C+ L +L G+ + A+ K + + +LIDMY CG ++ + +F MP RD
Sbjct: 358 ILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRD 417
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
+SWT +I G NG +EA+ F +M+++ + P+E+T +GVL AC H+G+V++ F
Sbjct: 418 KISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFA 477
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
M ++G+EP++ HY CMVDLLG+AG +A ++I MP KP+ +W S+L AC H +
Sbjct: 478 RMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDE 537
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
++ + A+Q+L PE+ + YV+L N+YA W+ L +VRK G KK G S IE+
Sbjct: 538 EMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEM 597
Query: 667 S 667
+
Sbjct: 598 N 598
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 228/532 (42%), Gaps = 80/532 (15%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSM--YADFTSLNDAHKLFDEMARKNIVSWTT 74
+S+ Q K +H + I GL + +++ + + A +FD M N W
Sbjct: 30 KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNN 89
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M+ Y+ PN A+ +Y MLE G V P+ + Y +LK + + GR +H+ I +
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERG-VMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKL 148
Query: 135 KLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG-------- 184
+ + N L+ +Y G S+ R +FD+ S+ G+V WN M+SG
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDR------SSKGDVVTWNVMISGYNRSKQFD 202
Query: 185 ------------------------------------GKQVHAFCVKRGFEKEDVTLTSLI 208
GK+VH + E V +LI
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALI 262
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY CG++D L +F+ M RDV+SWT I+ G ++N + AR
Sbjct: 263 DMYAACGDMDTALGIFDNMKSRDVISWTAIVTG---------------FTNLGQVGLARN 307
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
FD+ + W +MI GY+ + +E ++L + ++ + D +T S L A
Sbjct: 308 YFDKMPER------DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTA 361
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
C +L + I + ++D VG+ LID+Y GNV+ A+ +F+ +P +D +
Sbjct: 362 CAHLGAL--ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKI 419
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA-F 447
+W+ +I G +G A +F M+ ++ ++ VL C+ + +GK+ A
Sbjct: 420 SWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARM 479
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGC 498
+ G E ++D+ + G + + + K MP + + + W ++ C
Sbjct: 480 TTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGAC 531
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 228/494 (46%), Gaps = 59/494 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ + ++K G+ LH I+K G S ++F N L+ +Y+ ++ A +FD ++ ++
Sbjct: 126 LKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDV 185
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M++ Y +K+ + +++L++ M E V P+ +VL ACS DL++G+ +H
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFDEM-ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ K+E VL N L+DMY CG + L FD + +V W ++++G
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR------DVISWTAIVTGFTN 298
Query: 188 VHAFCVKRGF-----EKEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVSWTGI 238
+ + R + E++ V+ T++ID YL+ + L+LF M + D + I
Sbjct: 299 LGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSI 358
Query: 239 IVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYSSWAA 278
+ C L +AL+DMY NC + +A ++F+ A
Sbjct: 359 LTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFN------A 412
Query: 279 SAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFN 336
+ + W ++I G +N EEA+ + S + + + D T L AC + +++
Sbjct: 413 MPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKG 472
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIM 395
+F + + G E + ++DL R G++K A E+ +P K + + W L+
Sbjct: 473 KKFFAR---MTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLG 529
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH---AFCVKRG 452
C H +A + + ++ + + +C+ A+ R +++H + RG
Sbjct: 530 ACRVHRDEEMAEMAAQQILELEPENGAVYVL----LCNIYAACNRWEKLHEVRKLMMDRG 585
Query: 453 FEKEDITLTSLIDM 466
+K SLI+M
Sbjct: 586 IKK--TPGCSLIEM 597
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYAR--LGNVKSALELFHR 381
S +K C ++ Q+H + +G + IV + +I + LG+++ A +F
Sbjct: 24 SLIKTCKSMAQLK-----QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDT 78
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P + W+ +I G ++ G + A ++ +M+ +++ +LK + +++ G
Sbjct: 79 MPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCG 138
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+++H VK GF +LI +Y GE+ +F + DVV+W +I G ++
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRS 198
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+ E++ F EM + R+ P+ IT + VLSAC
Sbjct: 199 KQFDESMKLFDEMERMRVLPSSITLVSVLSAC 230
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C +++ G+ + I K + D F GN L+ MY + ++ A ++F+ M
Sbjct: 355 MVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMP 414
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++ +SWT ++ N A+ +++ ML+ S+ P+ VL AC+ SG +D G+
Sbjct: 415 HRDKISWTAVIFGLAINGYGEEALDMFSQMLK-ASITPDEVTCIGVLCACTHSGMVDKGK 473
Query: 126 LIHERITREK-LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
R+T + +E + ++D+ + G L ++ + N N +W S+L G
Sbjct: 474 KFFARMTTQHGIEPNVAHYGCMVDLLGRAGHL-KEAHEVIKNMPVKP--NSIVWGSLL-G 529
Query: 185 GKQVH 189
+VH
Sbjct: 530 ACRVH 534
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 294/617 (47%), Gaps = 64/617 (10%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
K+++SW +MV AY+ + + L+ M VEP+ Y+++L ACS L+LG+
Sbjct: 2 KDLISWNSMVVAYSQHGHGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGKE 57
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
+H R++R + + D L L++MY KCG L R++FD + S WN+M+SG
Sbjct: 58 VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSP------WNAMISG 111
Query: 185 ----GKQVHAFCVKRGFEKEDVTL-------------------TSLIDMYLKCGEIDDGL 221
G+ A + + E V + ++I Y + G+ L
Sbjct: 112 LVQHGRAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSL 171
Query: 222 ALFNFMP----ERDVVSWTGIIVGCFECSCFT-----------------LSALVDMYSNC 260
LF+ M + D ++ +I C +AL+ +Y+ C
Sbjct: 172 LLFHQMSLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEGRTALLSLYAKC 231
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
L AR +FD+ NV WNSMI+ Y + + EA+ L + G+ D
Sbjct: 232 GNLEAARDIFDKLKY-----RKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDI 286
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
T+ AL AC + S +++H I S D + + ++++YA+ G +++A+ F
Sbjct: 287 TYAGALGACTSY--GGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFE 344
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
++ +K+ V WS ++ +HG + A L+ M++ ++ ++ L CS + +L+
Sbjct: 345 KMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQE 404
Query: 441 GKQVHA-FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
GK +H+ + SL++MY KCG + +F + RD SW IIVG
Sbjct: 405 GKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHA 464
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G E ++ EM+Q + P+ +TF VL AC HAGL++ + F SM+ E+G+
Sbjct: 465 HHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDT 524
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLA 619
EHY CMVDLL +AG + AE+L+ MP++P W ++L + E + S AE
Sbjct: 525 EHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLLGSSEVQADLDRGSRYAEVAAG 584
Query: 620 TSPEDPSKYVMLSNVYA 636
P S YV+L N+Y+
Sbjct: 585 LEPGSSSSYVLLWNIYS 601
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 50/411 (12%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R V + C +++++G+++ + G+ + LLS+YA +L A +F
Sbjct: 185 DARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEG---RTALLSLYAKCGNLEAARDIF 241
Query: 62 DEMA-RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
D++ RKN+VSW +M+ AY + R A+ LY M E G V+P+ Y+ L AC+ G
Sbjct: 242 DKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEG-VQPDDITYAGALGACTSYGG 300
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
G IH RIT K+ D L +++MY KCG L + S + N W++
Sbjct: 301 SAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAM----SYFEKMRRKNAVTWSA 356
Query: 181 MLSGGKQVHAF----------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
M+ Q H + V GF+ ++TL + + G + +G A+ +
Sbjct: 357 MVGAFIQ-HGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSR---- 411
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
+ T + C F ++L++MY+ C L A +F + + WN++
Sbjct: 412 --IQATETLQNCL----FLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFS------WNTI 459
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I G+ + +E ++L + G+ D TF L AC S L G
Sbjct: 460 IVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLAC-------SHAGLLDRGRSHFL 512
Query: 351 GYELDYIVGSN------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLI 394
E+++ V + ++DL +R G V+SA EL H +P + + W+ L+
Sbjct: 513 SMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLL 563
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 215/546 (39%), Gaps = 91/546 (16%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL------------ 60
C ++ GK +H R+ + D L++MY+ L A ++
Sbjct: 46 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 105
Query: 61 -------------------------------------FDEMARKNIVSWTTMVTAYTSNK 83
FD M +K++ +W M+++Y +
Sbjct: 106 NAMISGLVQHGRAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHG 165
Query: 84 RPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLM 143
+ + ++ L+ H + V+P+ + +V+ ACS L+ GR + E+ T +E
Sbjct: 166 QASKSLLLF-HQMSLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEGRT-- 222
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ---------VHAFC 192
LL +Y KCG+L R +FD+ NV WNSM++ Q ++
Sbjct: 223 -ALLSLYAKCGNLEAARDIFDKLKY-----RKNVVSWNSMIAAYAQSGRGREALELYELM 276
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA 252
+ G + +D+T + G G+ + + + E + F +A
Sbjct: 277 KEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKI-----------RTDVFLDTA 325
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
+V+MY+ C L A F++ N W++M+ ++ + + EA+ L + S
Sbjct: 326 IVNMYAKCGELETAMSYFEKMRR------KNAVTWSAMVGAFIQHGYDREALDLYLRMVS 379
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI-VTSGYELDYIVGSNLIDLYARLGN 371
G T AL AC + A +H I T + + ++L+++YA+ G
Sbjct: 380 EGFQPSEITLAGALAACSRIGALQEGKA--IHSRIQATETLQNCLFLQNSLLNMYAKCGC 437
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ A +F L ++D +W+ +I+G HG L +M+ D + + VL
Sbjct: 438 LAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLA 497
Query: 432 CSCLASLRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVV 489
CS L RG+ + ++ G + ++D+ + G ++ L MP E +
Sbjct: 498 CSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAM 557
Query: 490 SWTGII 495
WT ++
Sbjct: 558 GWTTLL 563
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
++D++SW ++V Q+G +E + F++M ++P+ IT+ +L AC L+E
Sbjct: 1 DKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELGKE 57
Query: 545 IFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+ + + + +P L ++++ + G + A ++ + D + W +M+
Sbjct: 58 VHARVSRSRFKSDPALA--AALINMYSKCGVLESARRVFDGIQ-SVDPSPWNAMISGLVQ 114
Query: 604 HNNTKLVSIIAEQLLATS 621
H + + E++ A S
Sbjct: 115 HGRAREALGLFERMKAES 132
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 236/421 (56%), Gaps = 10/421 (2%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++L+ YS+ + A +LFD + +V W +MI G+V N EA+
Sbjct: 139 FVRNSLISGYSSSGLFDFASRLFD------GAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG-YELDYIVGSNLIDLY 366
+ +G+ + T S LKA + + RF VHGL + +G + D +GS+L+D+Y
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDV--RFGRSVHGLYLETGRVKCDVFIGSSLVDMY 250
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
+ A ++F +P ++VV W+ LI G + L+F +M+ S+ N+ +S
Sbjct: 251 GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
SVL C+ + +L RG++VH + +K E T+LID+Y+KCG +++ + +F+ + E+
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
+V +WT +I G +G A++A F M+ S + PNE+TF+ VLSAC H GLVEE +F
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
SMK + +EP +HY CMVDL G+ G ++A+ LI MP +P +W ++ +C H +
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD 490
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
+L A +++ P +Y +L+N+Y+ WD +++VRK K + K G SWIE
Sbjct: 491 YELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Query: 666 V 666
V
Sbjct: 551 V 551
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 167/426 (39%), Gaps = 112/426 (26%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H I+K+GL D F N+L+S Y+ + A +LFD K++V+WT M+ + N
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE-RITREKLEYDTVLM 143
+ A+ + M + G V N +VLKA D+ GR +H + +++ D +
Sbjct: 185 ASEAMVYFVEMKKTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 144 NTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----------------- 184
++L+DMY KC +K+FD+ + NV W ++++G
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPS------RNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 185 ---------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
G++VH + +K E T+LID+Y+KCG +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
++ + +F + E++V +WT +I G +A
Sbjct: 358 EEAILVFERLHEKNVYTWTAMING----------------------------------FA 383
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNF 335
A Y +A L + SS + + TF + L AC + L+
Sbjct: 384 AHGYA------------------RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV-VAWSGLI 394
R L + G Y + ++DL+ R G ++ A L R+P + V W L
Sbjct: 426 GRRLFLSMKGRFNMEPKADHY---ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Query: 395 MGCTKH 400
C H
Sbjct: 483 GSCLLH 488
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 29/279 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+V L+ G+ ++ G+S+H ++ G + D+F G++L+ MY + +DA K+FDEM
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+N+V+WT ++ Y ++ + + ++ ML+ V PN S+VL AC+ G L G
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSML 182
R +H + + +E +T TL+D+YVKCG L + F++ NV W +M+
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE------KNVYTWTAMI 379
Query: 183 SG----GKQVHAF-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+G G AF + +VT +++ G +++G LF M R +
Sbjct: 380 NGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNM 439
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
C +VD++ +L EA+ L ++
Sbjct: 440 EPKADHYAC----------MVDLFGRKGLLEEAKALIER 468
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 27/272 (9%)
Query: 342 QVHGLIVTSGY---ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
Q+H L++TS D + L + A L +L + W LI G
Sbjct: 19 QIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-GHF 77
Query: 399 KHGLN---SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK--QVHAFCVKRGF 453
G+ L++L +R M + ++ +LK + LR Q HA VK G
Sbjct: 78 SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHAHIVKFGL 134
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ + SLI Y G D LF ++DVV+WT +I G +NG A EA+ YF E
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC-------MV 566
M ++ + NE+T + VL A AG VE+ + +GL C +V
Sbjct: 195 MKKTGVAANEMTVVSVLKA---AGKVEDV----RFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
D+ G+ C+DDA+++ EMP + + W +++
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSR-NVVTWTALI 278
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 269/534 (50%), Gaps = 69/534 (12%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG--- 241
G Q+H+ ++ GF ++++DMY KC EI +FN MPER+ V+W +I G
Sbjct: 88 GIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGYLN 147
Query: 242 ---------------------C--------------------FECSCFTLSALVDMYSNC 260
C F+ + F +AL+DMYS C
Sbjct: 148 VMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKC 207
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
+ + ++ ++FD NV W +M++ Y NEQ +EA+ L+ + G+ +
Sbjct: 208 DGVDDSWRVFDYMVD------KNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYV 261
Query: 321 TFTSALKACINLLNFNS----RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
T+ S L + F+ ++ QVH I+ G E + + + L+ +Y++ N L
Sbjct: 262 TYNSLLSS------FSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTN---NL 312
Query: 377 ELFHRLPK----KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
E F+++ D ++W+ +I G + GL A F +M ++N ++ + +S+L
Sbjct: 313 EDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAI 372
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
++ G+++HA VK G+ L+ MY +CG IDD +F M + DVVSW
Sbjct: 373 GAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWN 432
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
++ GC +G EA+ F++M ++++KPN TFL VLSAC H G V++ F M+ +
Sbjct: 433 ALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSD 492
Query: 553 YGLEP-HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
LEP +EHY +VD+ G+AG +AE +I MP P +++ ++L AC H N ++
Sbjct: 493 ISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAV 552
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
A +LL P+DP+ Y++LSN+ AT G WD + VRK G +K G SWI
Sbjct: 553 RSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 232/533 (43%), Gaps = 66/533 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + + C + S G LH II+ G + ++ + ++ MYA + + AH++F+EM
Sbjct: 72 INKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMP 131
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N V+W +++ Y N P A+R F S L CS + G
Sbjct: 132 ERNDVTWNSLIFGYL-NVMPTCAMR-----------GVTSFSVSTCLVVCSQLEVRNFGA 179
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H + + + + L+DMY KC + + ++FD + NV W +M++
Sbjct: 180 QVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVD------KNVVTWTAMVT 233
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI---IV 240
A+ ++ + + ++ + +K + L +F + + + I+
Sbjct: 234 ------AYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSII 287
Query: 241 GC-FECSCFTLSALVDMYSNC-------NVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
C EC+ + + LV +YS C N + +L DQ S WN++I+
Sbjct: 288 RCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQIS------------WNAVIA 335
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY E+A+ + + + +D YTFTS L A L ++H LIV +GY
Sbjct: 336 GYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEE--GREMHALIVKTGY 393
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
V + L+ +YAR G + + +F + DVV+W+ L+ GC HG + A LF
Sbjct: 394 ASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQ 453
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL--------TSLI 464
M + N +VL CS + S+ +G + F + DI+L S++
Sbjct: 454 MRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYF------DFMRSDISLEPLRVEHYASVV 507
Query: 465 DMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGCGQNGRAKEAIAYFQEMIQ 516
D++ + G + + A+ MP S + ++ C +G + A+ +++++
Sbjct: 508 DIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLE 560
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L G +I++G+ +H I+K G + ++ N L+SMYA +++D+ ++
Sbjct: 360 MDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRV 419
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F M ++VSW ++T + N A+ L+ M + ++PN + AVL ACS G
Sbjct: 420 FWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRK-TKIKPNSTTFLAVLSACSHVGS 478
Query: 121 LDLG----RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+D G + I+ E L + +++D++ + G L+
Sbjct: 479 VDKGLEYFDFMRSDISLEPLRVEHYA--SVVDIFGRAGYLSE 518
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 239/424 (56%), Gaps = 11/424 (2%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
+ + L++MY + + A K+FD+ + + +WN++ + + E+ + L
Sbjct: 110 YLATKLINMYCDLGSVDHACKVFDE------TREKTIFVWNAIFRALAMASRGEDLLVLY 163
Query: 308 SHIHSSGMCIDSYTFTSALKACI--NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
++ G+ + +T+T LKAC+ L R ++H I+ GYE V + L+D+
Sbjct: 164 GQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDV 223
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQF 423
YAR G V A +F +P K++V+WS +I K+ + A LF+ M+ D N
Sbjct: 224 YARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPI 283
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ SVL+ C+ LA+L GK VHA+ ++RG + L +LI MY +CGEI G +F +M
Sbjct: 284 TMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+RDV+SW +I G +G K+AI F+ MI + P+ ITF+ VL AC HAGLVEEA
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
+F SM +Y + P +EHY CMVD+LG+A D+A +LI M FKP T+W S+L +C
Sbjct: 404 ILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRI 463
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMS 662
H N +L + L P++ YV+LS++YA MW+ + +VRK + G +K S
Sbjct: 464 HCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCS 523
Query: 663 WIEV 666
WIEV
Sbjct: 524 WIEV 527
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 124/282 (43%), Gaps = 65/282 (23%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ S+ G +H R++ GL QD + L++MY D S++ A K+FDE K I W
Sbjct: 84 CIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVW 143
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG----DLDLGRLIH 128
+ A R + LY M G + N F Y+ VLKAC +S L G+ IH
Sbjct: 144 NAIFRALAMASRGEDLLVLYGQMNWIG-IPSNRFTYTYVLKACVVSELSICPLRKGKEIH 202
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-----NVALWNSM-- 181
I R E +M TLLD+Y + G Y ++A+S +G N+ W++M
Sbjct: 203 AHILRHGYEGHVHVMTTLLDVYARFG---------YVSYASSVFGAMPDKNIVSWSAMIA 253
Query: 182 --------------------------------------------LSGGKQVHAFCVKRGF 197
L GK VHA+ ++RG
Sbjct: 254 CYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGL 313
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ L +LI MY +CGEI G +F++M +RDV+SW +I
Sbjct: 314 DSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLI 355
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 18/222 (8%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++GK +H I+++G + LL +YA F ++ A +F M KNIVSW+ M+
Sbjct: 194 PLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIA 253
Query: 78 AYTSNKRPNWAIRLYN-HMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
Y N+ P A+ L+ MLE PN +VL+AC+ L+ G+L+H + R L
Sbjct: 254 CYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGL 313
Query: 137 EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLS-------GGKQ 187
+ ++NTL+ MY +CG ++ +++FD +V WNS++S G K
Sbjct: 314 DSTLPVLNTLITMYGRCGEISTGQRVFDYMKK------RDVISWNSLISIYGMHGLGKKA 367
Query: 188 VHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ F + RG +T +++ G +++ LF M
Sbjct: 368 IQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESM 409
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L+ C +++ GK +H +++ GL + N L++MY ++ ++FD M
Sbjct: 285 MVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK 344
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++++SW ++++ Y + AI+++ +M+ G V P+ + VL ACS +G ++ +
Sbjct: 345 KRDVISWNSLISIYGMHGLGKKAIQIFENMINRG-VSPSYITFITVLCACSHAGLVEEAK 403
Query: 126 LIHE 129
++ E
Sbjct: 404 ILFE 407
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 118/315 (37%), Gaps = 52/315 (16%)
Query: 334 NFNSRFALQVHGL-IVTSGYELDYIVGSN---LIDLYARLGNVKSALELFHRLPKKDVVA 389
N+ R++ V + + SGY I +N LI R GN+K A++L P
Sbjct: 17 NYPCRYSSHVSFVSLNASGYPTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKT 76
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
+ LI C + SL G VH V
Sbjct: 77 FELLINSCIEQN-----------------------------------SLSDGVDVHHRLV 101
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
G +++ T LI+MY G +D +F E+ + W I R ++ +
Sbjct: 102 GSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLV 161
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGL----VEEAWTIFTSMKPEYGLEPHLEHYYCM 565
+ +M + N T+ VL AC + L + + I + +G E H+ +
Sbjct: 162 LYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHIL-RHGYEGHVHVMTTL 220
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTI--WASMLKACETHNNTKLVSIIAEQLLATSPE 623
+D+ + G A + M PDK I W++M+ AC N + ++ Q++
Sbjct: 221 LDVYARFGYVSYASSVFGAM---PDKNIVSWSAMI-ACYAKNEMPMKALELFQIMMLEAC 276
Query: 624 D--PSKYVMLSNVYA 636
D P+ M+S + A
Sbjct: 277 DTVPNPITMVSVLQA 291
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/681 (29%), Positives = 319/681 (46%), Gaps = 89/681 (13%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
R +V AL C + G+ +H R++K G + F N++L+MYA L DA +F
Sbjct: 296 RALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRA 355
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
A+ + S+ MV Y ++R A++L++ M E V Y+ ++K + +
Sbjct: 356 HAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVS-----YTTLIKGYAQNNQWSE 410
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+ + + + V + T++ A S G + W+
Sbjct: 411 AMELFREMRNLGIMLNEVTLATVIS-------------------ACSHLGGI--WDC--- 446
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
K +H+ +K + T+L+ MY C + D LF+ MPER++V+W ++ G
Sbjct: 447 --KMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERNLVTWNVMLNG-- 502
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
YS ++ +A++LFDQ + ++ W +MI G + Q +EA
Sbjct: 503 -------------YSKAGLIEQAKELFDQITE------KDIVSWGTMIDGCLRKNQLDEA 543
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL--------- 354
+ + + GM L A + S LQ+HG IV G++
Sbjct: 544 LVYYTEMLRRGMKPSEVMMVDLLSASAR--SVGSSKGLQLHGTIVKMGFDCYDFLQATII 601
Query: 355 ---------------------DYIVGSN-LIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
D+I N LI + + G V+ A E+F + KD+ +W+
Sbjct: 602 HFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNA 661
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ G + LA LFR+MI+S+Q + + SV S L SL GK+ H + +
Sbjct: 662 MMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRS 721
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALF---KFMPERDVVSWTGIIVGCGQNGRAKEAI 508
D + ++I+MY KCG I+ L +F K + + W II G +G AK A+
Sbjct: 722 SIPPNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLAL 781
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+ ++ +KPN ITF+GVLSAC HAGLVE T F SMK ++G+EP ++HY CMVDL
Sbjct: 782 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 841
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG++G ++A+++I MP K D IW +L A H N ++ + A +L A P
Sbjct: 842 LGKSGKLEEAKEMIKNMPVKADVMIWGMLLSASRIHGNVEIAELAAAELAAIDPSHGGCK 901
Query: 629 VMLSNVYATLGMWDSLSKVRK 649
VMLSNVYA G W+ ++ VR+
Sbjct: 902 VMLSNVYADAGRWEDVALVRE 922
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 206/496 (41%), Gaps = 65/496 (13%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L ++ A H G I K LH IK L +F NLL MY + L DA KLFD
Sbjct: 430 LATVISACSHLG---GIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFD 486
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM +N+V+W M+ Y+ A L++ + E V + ++ C LD
Sbjct: 487 EMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVS-----WGTMIDGCLRKNQLD 541
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
+ + + R ++ V+M LL +A + G+
Sbjct: 542 EALVYYTEMLRRGMKPSEVMMVDLLSA------------------SARSVGS-------- 575
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
S G Q+H VK GF+ D ++I Y + L F + + S +I G
Sbjct: 576 SKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAG- 634
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F + +V+ +AR++FDQ ++ WN+M+SGY + +
Sbjct: 635 -----FVKNGMVE---------QAREVFDQTRD------KDIFSWNAMMSGYAQSLSPQL 674
Query: 303 AITLLSH-IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
A+ L I SS + D+ T S A +L + + H + S + + +
Sbjct: 675 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE--GKRAHEYLNRSSIPPNDNLIAA 732
Query: 362 LIDLYARLGNVKSALELFHRLPK---KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+I++YA+ G++++AL +FH+ + W+ +I G HG LA L+ D+ +
Sbjct: 733 IINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 792
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVK--RGFEKEDITLTSLIDMYLKCGEIDDG 476
N VL C C A L + + +K G E + ++D+ K G++++
Sbjct: 793 KPNSITFVGVLSAC-CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKSGKLEEA 851
Query: 477 LALFKFMPER-DVVSW 491
+ K MP + DV+ W
Sbjct: 852 KEMIKNMPVKADVMIW 867
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
S L D + ++ + ++S+ L C+ + G+Q+H +K G + S+
Sbjct: 278 SFPSLTHFDFSGESSNIERALVSA-LGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSV 336
Query: 464 IDMYLKC-------------------------------GEIDDGLALFKFMPERDVVSWT 492
++MY KC + D L LF MPER VS+T
Sbjct: 337 LNMYAKCRLLVDAESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYT 396
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G QN + EA+ F+EM + NE+T V+SAC H G + + + S+ +
Sbjct: 397 TLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC-KMLHSLAIK 455
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
L+ + ++ + C DA +L EMP + + W ML
Sbjct: 456 LNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPER-NLVTWNVML 500
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 306/631 (48%), Gaps = 104/631 (16%)
Query: 72 WTTMVTAYTSNKRPNWAIRLY--NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
++ M+ Y+ N + L+ H L ++ P F+Y ++K SG++ H
Sbjct: 68 YSCMLKYYSRMGAHNQVVSLFKCTHSL---NLRPQPFVYIYLIKLAGKSGNM-----FHA 119
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ + D + N +LDMY K G L R LF+Q A +A WNSM+SG
Sbjct: 120 YVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQM------AERTLADWNSMISG--- 170
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
C K G E E V L FN MP R++++WT ++ G
Sbjct: 171 ----CWKSGNETEAVVL-------------------FNMMPARNIITWTSMVTG------ 201
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
Y+ L AR+ FD+ + V WN+M S Y E +EA+ L
Sbjct: 202 ---------YAKMGDLESARRYFDEMPERS------VVSWNAMQSAYAQKECPKEALNLF 246
Query: 308 SHIHSSGMCIDSYTFTSALKACIN----------------------------LLNFNSRF 339
+ G+ D T+ + +C + LL+ +++F
Sbjct: 247 HQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKF 306
Query: 340 A-LQVHGLIVTS-GYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
L++ I G + + + + +I Y R+G + A ELF +PK+DVV+W+ +I G
Sbjct: 307 GNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGY 366
Query: 398 TKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
++G ++++ LF++MI S D+ ++ I+SVL C + +L+ V ++ +
Sbjct: 367 AQNGESAMSIELFKEMI-SCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKL 425
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
SLI MY KCG + D +F+ M RDVVS+ +I G NG KEAI M
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTME 485
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+ ++P+ +T++GVL+AC HAGL+ E +F S++ P ++HY CMVDLLG+AG
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGEL 540
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
D+A+ LI MP KP ++ S+L A H L + A +L P++ YV+LSN+Y
Sbjct: 541 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 600
Query: 636 ATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
A+ G W+ + +VR+ KK G KK+ GMSW+E
Sbjct: 601 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVE 631
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 173/399 (43%), Gaps = 54/399 (13%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
+++I T ++++ YA L A + FDEM +++VSW M +AY + P A+ L++
Sbjct: 189 ARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
MLE G + P+ + + +CS GD L I I ++ + ++ + LLDM+ K G
Sbjct: 249 MLEEG-ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSL 207
+L R +FD+ + N WN M+S +V + R +++ V+ S+
Sbjct: 308 NLEIARNIFDEL-----GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 208 IDMYLKCGEIDDGLALFNFM-----PERDVVSWTGIIVGCFECSCFTLS----------- 251
I Y + GE + LF M + D V+ ++ C LS
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 252 ---------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+L+ MYS C + +A ++F + +V +N++ISG+ N +E
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGT------RDVVSFNTLISGFAANGHGKE 476
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
AI L+ + G+ D T+ L AC LLN + V D+ +
Sbjct: 477 AIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTV------DHY--A 528
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
++DL R G + A L +P K G ++ ++
Sbjct: 529 CMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASR 567
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 141/344 (40%), Gaps = 53/344 (15%)
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
NC L D S + +S + ++++ M+ Y + + ++L HS +
Sbjct: 42 NCTRLHAHPAYVD--SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQ 99
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+ + I L+ + H ++ G+ D+ + + ++D+YA+ G V A L
Sbjct: 100 PFVY-------IYLIKLAGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNL 152
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F ++ ++ + W+ +I GC K G + A +LF M N
Sbjct: 153 FEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNI-------------------- 192
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
IT TS++ Y K G+++ F MPER VVSW +
Sbjct: 193 -------------------ITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 499 GQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
Q KEA+ F +M++ + P++ T++ +S+C G A +I + ++ +
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV--- 290
Query: 559 LEHYY--CMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
L + ++D+ + G + A + E+ + + W M+ A
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISA 334
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 36/340 (10%)
Query: 336 NSRFALQVHG-LIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWS 391
N R Q HG L+ S + +Y V LI+ L+A V S +F P D +S
Sbjct: 13 NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS---IFTSSPSPDASVYS 69
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
++ ++ G ++ LF+ + N F+ ++K+ + G HA+ +K
Sbjct: 70 CMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNMFHAYVLKL 124
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G + +++DMY K G++D LF+ M ER + W +I GC ++G EA+ F
Sbjct: 125 GHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLF 184
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
M+ +R N IT+ +++ G +E A F M PE + + M Q
Sbjct: 185 N-MMPAR---NIITWTSMVTGYAKMGDLESARRYFDEM-PERSVVS----WNAMQSAYAQ 235
Query: 572 AGCFDDAEQLIAEM---PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
C +A L +M PD T W + +C + + L I + K+
Sbjct: 236 KECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMI-------DQKH 288
Query: 629 VMLSNVYATL-----GMWDSLSKVRKAGKKLGEKKAGMSW 663
++L++ T + +L R +LG ++ ++W
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTW 328
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 33 GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLY 92
G ++ T N ++S Y L+ A +LFD M ++++VSW +M+ Y N +I L+
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 93 NHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVK 152
M+ ++P+ ++VL AC G L L + + + + ++ N+L+ MY K
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSK 439
Query: 153 CGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAFCV---KRGFEKEDVT 203
CGS+ D + + +V +N+++SG GK+ + + G E + VT
Sbjct: 440 CGSVA----DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 204 LTSLIDMYLKCGEIDDGLALF 224
++ G +++G +F
Sbjct: 496 YIGVLTACSHAGLLNEGKNVF 516
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 237/425 (55%), Gaps = 15/425 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F +AL+ +S+C + AR +FD + +V WNSMISGY+ + + E A+ +
Sbjct: 163 FVQNALISAFSSCGAVEAARAVFDMLPALVR----DVVSWNSMISGYLQSHRYELALKVF 218
Query: 308 SHIHSSG-MCIDSYTFTSALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ G + D T SAL C + LL+ + +HGL SG+ LD VGS+LID
Sbjct: 219 WELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKK----IHGLFTGSGFVLDVFVGSSLID 274
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y++ G ++ A ++F R+P ++ V W+ +I G + L A LFR+M +
Sbjct: 275 MYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAAT 334
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
I+ VL C +L +G+ +H +C + E + +LI MY KCG+I L +F +
Sbjct: 335 IACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLT 394
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+ D+ SW+ +I G NG + +A+ F +M + S ++PNEITFLGVL AC H G V++
Sbjct: 395 QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGL 454
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F +M Y L P +EHY CMVDLLG+A +AE+ I +P +PD IW S+L AC
Sbjct: 455 YYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRN 514
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGM 661
H N +L A+Q+ P V+LSNVYA+ W + +VRK A +++ +K+ G
Sbjct: 515 HGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRI-KKQPGC 573
Query: 662 SWIEV 666
S++E+
Sbjct: 574 SFVEI 578
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/571 (23%), Positives = 220/571 (38%), Gaps = 127/571 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND---AHKLFDEMAR 66
L++ RS Q S I G+ +D + LL Y + +D + LF ++ +
Sbjct: 35 LQNLSHPRSFNQILS---HAIASGVFRDPVVSSKLL--YYSLSHDHDFAFSRTLFFQIHK 89
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
N+ SW M AY+ + P I LYN ML G++ P+ + + VLKAC+ L GR
Sbjct: 90 PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTL-PDNYSFPFVLKACARLSLLHKGRE 148
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + + D + N L+ + CG++ R +FD + +V WNSM+SG
Sbjct: 149 IHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDML----PALVRDVVSWNSMISG 204
Query: 185 ---------------------------------------------GKQVHAFCVKRGFEK 199
GK++H GF
Sbjct: 205 YLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVL 264
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
+ +SLIDMY KCG+I+D +F+ +P R+ V WT +I G
Sbjct: 265 DVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAG------------------ 306
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
Y ++ +EAI L + G D+
Sbjct: 307 ----------------------------------YAQSDLFKEAIELFREMQIGGFAADA 332
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
T L AC + +H + E+D + LI +Y++ G+++ ALE+F
Sbjct: 333 ATIACVLSACGHWGALAQ--GRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIF 390
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASL 438
H L + D+ +WS +I G +G + A LF M + S+ N+ VL C+ +
Sbjct: 391 HGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFV 450
Query: 439 RRG-----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWT 492
+G + + G E ++D+ + + + + +P + DVV W
Sbjct: 451 DKGLYYFNAMTQIYNLTPGIEH----YGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWR 506
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
++ C +G + +A F L+P
Sbjct: 507 SLLFACRNHGNIE--LAEFAAKQIEELEPRR 535
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V AL CG+ + GK +H G D+F G++L+ MY+ + DA K+FD +
Sbjct: 234 LVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIP 293
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N V WT+M+ Y + AI L+ M + G + + VL AC G L GR
Sbjct: 294 HRNTVCWTSMIAGYAQSDLFKEAIELFREM-QIGGFAADAATIACVLSACGHWGALAQGR 352
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
IH R +E D N L+ MY KCG + + L + ++ W++++SG
Sbjct: 353 WIHLYCERNSIEMDLNARNALIGMYSKCGDIQKAL----EIFHGLTQPDIFSWSAVISGL 408
Query: 185 ------GKQVHAFC---VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
K +H F + ++T ++ G +D GL FN M + + +
Sbjct: 409 AMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQ--IYNL 466
Query: 236 TGII--VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
T I GC +VD+ N+L EA K +V +W S++
Sbjct: 467 TPGIEHYGC----------MVDLLGRANLLVEAEKFIR-----TLPIQPDVVIWRSLL 509
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 144/314 (45%), Gaps = 14/314 (4%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLG---NVKSALELFHRLPKKDVVAWSGLIMGCT 398
Q+ + SG D +V S L LY L + + LF ++ K +V +W+ + +
Sbjct: 46 QILSHAIASGVFRDPVVSSKL--LYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYS 103
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ + L+ M+ + + + VLK C+ L+ L +G+++H+ +K G +
Sbjct: 104 RSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVF 163
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPE--RDVVSWTGIIVGCGQNGRAKEAIAYFQEMI- 515
+LI + CG ++ A+F +P RDVVSW +I G Q+ R + A+ F E++
Sbjct: 164 VQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLG 223
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
L P+E+T + LS C GL++ I + G + ++D+ + G
Sbjct: 224 DGSLSPDEVTLVSALSVCGRLGLLDLGKKI-HGLFTGSGFVLDVFVGSSLIDMYSKCGQI 282
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKA-CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+DA ++ +P + + W SM+ ++ + + + E + D + ++ V
Sbjct: 283 EDARKVFDRIPHR-NTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAAT---IACV 338
Query: 635 YATLGMWDSLSKVR 648
+ G W +L++ R
Sbjct: 339 LSACGHWGALAQGR 352
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I L CG ++ QG+ +H + + D+ N L+ MY+ + A ++F
Sbjct: 331 DAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIF 390
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + +I SW+ +++ N + A+ L++ M + PN + VL AC+ G +
Sbjct: 391 HGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFV 450
Query: 122 DLG 124
D G
Sbjct: 451 DKG 453
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 282/562 (50%), Gaps = 42/562 (7%)
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+L+ G+ +H + R +T L N L++Y KCG L T KLFD+ S N+
Sbjct: 90 ELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQR------NMVS 143
Query: 178 WNSMLSG-------GKQVHAFCVKRGFEKEDVT---LTSLIDMYLKCGEIDDGLALFNFM 227
W S+++G + + +FC R E E T L+S++ G I G +
Sbjct: 144 WTSIITGFAHNSRFQEALSSFCQMR-IEGEIATQFALSSVLQACTSLGAIQFGTQVH--- 199
Query: 228 PERDVVSWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
++V C F C F S L DMYS C L +A K F++ A L
Sbjct: 200 ---------CLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDA------VL 244
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
W SMI G+V N ++A+T + + + ID + S L AC L S F +H
Sbjct: 245 WTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKA--SSFGKSLHAT 302
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLNSL 405
I+ G+E + +G+ L D+Y++ G++ SA +F +V+ + +I G +
Sbjct: 303 ILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEK 362
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A F D+ + N+F +S++K C+ A L G Q+H VK F+++ ++L+D
Sbjct: 363 ALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVD 422
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY KCG D + LF + D ++W ++ Q+G + AI F MI LKPN +T
Sbjct: 423 MYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVT 482
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
F+ +L C HAG+VE+ F+SM+ YG+ P EHY C++DLLG+AG +AE I M
Sbjct: 483 FVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM 542
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
PF+P+ W S L AC+ H + + A++L+ PE+ +V+LSN+YA W+ +
Sbjct: 543 PFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQ 602
Query: 646 KVRKAGKKLGEKK-AGMSWIEV 666
+RK K K G SW+++
Sbjct: 603 SLRKMIKDGNMNKLPGYSWVDI 624
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 232/508 (45%), Gaps = 16/508 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + + ++ + + + +GK LH +I+ G + F N+ L++Y+ L+ KLF
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D+M+++N+VSWT+++T + N R A+ + M G + F S+VL+AC+ G +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQ-FALSSVLQACTSLGAI 192
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G +H + + + + + L DMY KCG L+ D + + LW SM
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELS----DACKAFEEMPCKDAVLWTSM 248
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ G + F + VT ID ++ C + AL + + I+
Sbjct: 249 IDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSL--HATILKL 306
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
FE F +AL DMYS + A +F +S + + ++I GYV +Q E
Sbjct: 307 GFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCIS-----IVSLTAIIDGYVEMDQIE 361
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
+A++ + G+ + +TFTS +KAC N Q+HG +V ++ D V S
Sbjct: 362 KALSTFVDLRRRGIEPNEFTFTSLIKACANQAKL--EHGSQLHGQVVKFNFKRDPFVSST 419
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+Y + G +++LF + D +AW+ L+ ++HGL A F MI+ N
Sbjct: 420 LVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPN 479
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++LK CS + G + K G ++ + +ID+ + G++ +
Sbjct: 480 AVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFI 539
Query: 481 KFMP-ERDVVSWTGIIVGCGQNGRAKEA 507
MP E +V W + C +G + A
Sbjct: 540 NNMPFEPNVFGWCSFLGACKIHGDMERA 567
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 7/235 (2%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D + L C ++ GKSLH I+K G + F GN L MY+ + A +
Sbjct: 275 IDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNV 334
Query: 61 FDEMAR-KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F + +IVS T ++ Y + A+ + + G +EPN F +++++KAC+
Sbjct: 335 FQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRG-IEPNEFTFTSLIKACANQA 393
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGN-VA 176
L+ G +H ++ + + D + +TL+DMY KCG +LFD+ N A+ V
Sbjct: 394 KLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVG 453
Query: 177 LWNSMLSGGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
+++ G + F + RG + VT +L+ G ++DGL F+ M +
Sbjct: 454 VFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEK 508
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 203/687 (29%), Positives = 319/687 (46%), Gaps = 97/687 (14%)
Query: 38 IFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE 97
+F N L+ A L A +LF+EM R+N+VS+ MV+A + R A RL++ M
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 98 YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT 157
V N M ACS G ++ R + + + + EY +M + YV+ G LT
Sbjct: 71 RNPVSWNTMMV-----ACSQHGRVEDARGLFDAMP-ARNEYSWTIM---VSCYVRAGELT 121
Query: 158 --RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCVKRGFEKED-VTLTSLIDM 210
R+L D+ +A +N+M+SG G+ A + + D V+ S++
Sbjct: 122 LARELLDRMPGEKCAA-----CYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGG 176
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSA----------------LV 254
++ EI + F+ MP++D+VSW ++ G +++ LV
Sbjct: 177 LIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLV 236
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
+ Y + EAR+LFD+ NV WN ++SGYV Q E A L +
Sbjct: 237 NGYCQAGRMGEARELFDRMPE------RNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKN 290
Query: 315 -----MCIDSYTFTSALKACINLL------NFNSRFALQVHGLI----VTSGYEL----- 354
+ + + L+ ++L N ++ AL +HG + + +L
Sbjct: 291 SISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTAL-MHGYLKSNLIDDARQLFDGIV 349
Query: 355 --DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
D + + +I Y + G + A+ LF ++P KD+++W+ +I GC + G A +FR
Sbjct: 350 VRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRK 409
Query: 413 MINSNQDVNQFIISSV-------------------------------LKVCSCLASLRRG 441
M N IIS L + LA+L+ G
Sbjct: 410 MKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIG 469
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q H+ V+ GF + +LI Y KCG + + +F M +D+VSW +I G N
Sbjct: 470 RQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASN 529
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
G E IA F+EM + ++P+EIT + VLSAC HAGL++E F SM Y L+P EH
Sbjct: 530 GNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEH 589
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
Y CMVDLLG+AG +A +L+ M +P+ +W ++L AC H N ++ + AE+L
Sbjct: 590 YTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELE 649
Query: 622 PEDPSKYVMLSNVYATLGMWDSLSKVR 648
P S YV+LSN+ G WD KVR
Sbjct: 650 PCKASNYVLLSNICVEAGKWDDADKVR 676
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/584 (23%), Positives = 245/584 (41%), Gaps = 121/584 (20%)
Query: 35 SQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNH 94
S ++ + NL++ Y + +A +LFD M +N+V+W +++ Y + A L+
Sbjct: 226 SPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIE 285
Query: 95 MLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
M E S+ ++ ++ SG L + + ++ + + T LM+ Y+K
Sbjct: 286 MPEKNSIS-----WTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHG----YLKSN 336
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYL 212
+ R+LFD + WN+M+SG Y+
Sbjct: 337 LIDDARQLFD------GIVVRDAVCWNTMISG--------------------------YV 364
Query: 213 KCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQ 272
+CG +D+ + LF MP +D++SW +I GC + +A + RK+ +
Sbjct: 365 QCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASI-----------FRKMKRR 413
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
N WNS+ISG+V N EA+ + D T+ L A NL
Sbjct: 414 ----------NTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANL 463
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
+ Q H L+V +G+ D G+ LI YA+ G + A ++F + +D+V+W+
Sbjct: 464 ATL--QIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNA 521
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
LI G +G S +FR+M ++ ++ + VL CS HA
Sbjct: 522 LIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACS-----------HA------ 564
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE----RDVVS-WTGIIVGCGQNGRAKEA 507
G ID+GL F M + + V +T ++ G+ GR +EA
Sbjct: 565 ------------------GLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREA 606
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP-HLEHYYCMV 566
Q M +++PN + +L ACR E AW + + LEP +Y +
Sbjct: 607 FELVQGM---QIQPNAGVWGALLGACRVHKNHEIAWLAAEKL---FELEPCKASNYVLLS 660
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++ +AG +DDA+++ M S+L++C H + K++
Sbjct: 661 NICVEAGKWDDADKVRVLMK--------ESILRSCNIHISNKML 696
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 15/222 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ G+ H +++ G D GN L+S YA + +A ++FDEM ++IVSW ++
Sbjct: 465 TLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALID 524
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIHERITREKL 136
Y SN + I ++ M E SV P+ VL ACS +G +D G + I L
Sbjct: 525 GYASNGNGSEVIAVFREM-EANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSL 583
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHA------ 190
+ ++D+ + G L R+ F+ N +W ++L G +VH
Sbjct: 584 KPVAEHYTCMVDLLGRAGRL-REAFELVQ--GMQIQPNAGVWGALL-GACRVHKNHEIAW 639
Query: 191 FCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMPE 229
++ FE E ++ + ++ ++ G+ DD + M E
Sbjct: 640 LAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKE 681
>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 735
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 201/726 (27%), Positives = 329/726 (45%), Gaps = 115/726 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
LH +++K G+S D FT N+LL Y+ L +A +FDEM +N+VSWT MV+
Sbjct: 6 LHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGGA 65
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD-LDLGRLIHERITREKLEYDTVLM 143
+ L+ M+ G + PN F ++ L+A + D L LG +H + + D
Sbjct: 66 SQLGLGLFVSMVRSGFL-PNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAG 124
Query: 144 NTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG------------------- 184
++LL MY G ++ D +A ++A WN+ML G
Sbjct: 125 SSLLLMYANHG----RVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRR 180
Query: 185 ---------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
G+Q+H + FE + + L+DMY + G D +A+
Sbjct: 181 CDMFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAV 240
Query: 224 FNFMPERDVVSWTGII------------VGCF----ECSC----FTLS------------ 251
F + +D +SW +I +GCF C TLS
Sbjct: 241 FRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENA 300
Query: 252 -----------------------ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
A+++M S C +L A F + N+ WN
Sbjct: 301 SLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLR------FRNIVTWN 354
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY L +E+A+ L + G D +T+++ L A R QVH I+
Sbjct: 355 EMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEA--HEPRNHEQVHASIL 412
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G V ++LI A G+V+SAL++ K D+V+W +I KHGLN+
Sbjct: 413 KQGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMS 472
Query: 409 LFRDMI--NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF D+ +S ++FI+++VL C+ A LR+ ++VH+ ++ G ++L+D
Sbjct: 473 LF-DLFRGDSMNRADEFILATVLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDA 531
Query: 467 YLKCGEIDDGLALFKFMPER--DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
Y KCG I + F + D + + ++ +G EA++ +++M +++L P
Sbjct: 532 YAKCGGIASAKSAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPA 591
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
TF+ ++SAC + GLVE+ +F+ M E+G+ P +Y +VDLL + G +A+ +I
Sbjct: 592 TFVALVSACSNFGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIE 651
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDS 643
MP P ++W S++ C H N +L + AEQ+L+ +P YV LSNV+A G W
Sbjct: 652 VMPLHPWPSVWRSLMNGCRIHGNMELGVLAAEQILSMTPSSDGAYVSLSNVFADDGEWHL 711
Query: 644 LSKVRK 649
+ RK
Sbjct: 712 AEEARK 717
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 169/418 (40%), Gaps = 47/418 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C + + G + +G S+++ N +++M + LN A F + +NI
Sbjct: 291 LRLCAAKENASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNI 350
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W M+ Y A+RL+ M+ +G P+ F YSAVL A + + +H
Sbjct: 351 VTWNEMIAGYGLYSYSEDAMRLFRSMVCFGE-RPDEFTYSAVLSAFQEAHEPRNHEQVHA 409
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I ++ + + +L+ GS+ K+ + ++S G
Sbjct: 410 SILKQGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGKM------------DLVSWGVV 457
Query: 188 VHAFCVKRGFEKEDVTLTSLI--------DMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ AF +K G E ++L L D ++ ++ A N R ++
Sbjct: 458 ISAF-LKHGLNNEVMSLFDLFRGDSMNRADEFILATVLN---ACANAALLRQCRRVHSLV 513
Query: 240 VGCFECSCFTL-SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
+ + F + SALVD Y+ C + A+ F SS + G+ L+N+M++ Y +
Sbjct: 514 IRTGHSNHFCVASALVDAYAKCGGIASAKSAFADVSSGS----GDAILYNTMLTAYANHG 569
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS-------G 351
EA++L + + + TF + + AC N F L G I+ S G
Sbjct: 570 LINEALSLYEDMARAQLVPTPATFVALVSACSN-------FGLVEQGKILFSLMLSEEHG 622
Query: 352 YELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD-VVAWSGLIMGCTKHGLNSLAYL 408
+ L+DL AR G + A ++ +P W L+ GC HG L L
Sbjct: 623 IHPTRANYATLVDLLARKGFLHEAKDIIEVMPLHPWPSVWRSLMNGCRIHGNMELGVL 680
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 236/428 (55%), Gaps = 10/428 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I + + F + LV MY C L +AR + D+ + V W +MISGY
Sbjct: 68 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS------VVSWTTMISGYSQT 121
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E++ EA+ L + +G + YT + L +C + QVH L+V + +E
Sbjct: 122 ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQ--GKQVHSLLVKTNFESHMF 179
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS+L+D+YA+ N++ A +F LP++DVV+ + +I G + GL+ A LFR + +
Sbjct: 180 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 239
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N ++++ S LASL GKQVHA +++ SLIDMY KCG++
Sbjct: 240 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 299
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M ER VVSW +++G G++G E I+ F+++ +KP+ +T L VLS C H G
Sbjct: 300 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGG 358
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV+E IF ++ E H HY C++DLLG++G + A LI MPF+ +IW S+
Sbjct: 359 LVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSL 418
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG-KKLGE 656
L AC H N + ++A++LL PE+ YV+LSN+YA GMW + KVRK +K
Sbjct: 419 LGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 478
Query: 657 KKAGMSWI 664
K+ G SWI
Sbjct: 479 KEPGQSWI 486
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 125/230 (54%), Gaps = 15/230 (6%)
Query: 312 SSGMCIDS-----YTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYELDYIVGSNL 362
+SGM + + + +A+ ACI R AL QVH ++T+ Y +G+ L
Sbjct: 30 ASGMALPGASARFHEYEAAITACIE------RRALWEGRQVHARMITARYRPAVFLGTRL 83
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+ +Y R G + A + R+P++ VV+W+ +I G ++ + A LF M+ + N+
Sbjct: 84 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ +++VL CS S+ +GKQVH+ VK FE +SL+DMY K I + +F
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+PERDVVS T II G Q G +EA+ F+++ ++ N +TF +++A
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 253
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 177/446 (39%), Gaps = 120/446 (26%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C +RR++ +G+ +H R+I +F G L++MY +L+DA + D M ++
Sbjct: 48 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTTM++ Y+ +R A+ L+ ML G + PN + + VL +CS + G+ +H
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASAYGN 174
+ + E + ++LLDMY K ++ R++FD S +A
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226
Query: 175 VAL--------------------WNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLI 208
AL + LSG GKQVHA +++ SLI
Sbjct: 227 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 286
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KCG++ +F+ M ER VVSW +++G
Sbjct: 287 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG--------------------------- 319
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
YG L E I+L +H + DS T + L
Sbjct: 320 ------------YGRHGL-------------GHEVISLFKDLHKE-VKPDSVTLLAVLSG 353
Query: 329 CINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN-----------LIDLYARLGNVKSAL 376
C HG +V G ++ D +V +IDL R G ++ AL
Sbjct: 354 C-------------SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 400
Query: 377 ELFHRLPKKDVVA-WSGLIMGCTKHG 401
L +P + + W L+ C H
Sbjct: 401 NLIENMPFESTPSIWGSLLGACRVHA 426
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C +SI QGK +H ++K +F G++LL MYA ++ +A ++FD +
Sbjct: 146 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VS T +++ Y A+ L+ + G ++ N ++ ++ A S LD G+
Sbjct: 206 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 264
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ-----YSNWAA--SAYGNVA 176
+H I R++L + L N+L+DMY KCG L +R++FD +W A YG
Sbjct: 265 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN-FMPERDVVSW 235
L + ++S K +H + + + VTL +++ G +D+GL +F+ + E+ +
Sbjct: 325 LGHEVISLFKDLH-----KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLH 379
Query: 236 TG 237
TG
Sbjct: 380 TG 381
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+ + C +L G+QVHA + + T L+ MY++CG +DD + MPER
Sbjct: 47 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
VVSWT +I G Q R EA+ F +M+++ PNE T VL++C + + +
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
S+ + E H+ ++D+ ++ +A ++ +P
Sbjct: 167 -SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 229/405 (56%), Gaps = 11/405 (2%)
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
RKLFD+ +V WN++I+G N EEA+ ++ + + DS+T +S L
Sbjct: 153 RKLFDRMP------VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSIL 206
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
N ++HG + G++ D +GS+LID+YA+ V+ ++ FH L +D
Sbjct: 207 PIFTEHANVTK--GKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRD 264
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
++W+ +I GC ++G FR M+ Q SSV+ C+ L +L GKQ+HA
Sbjct: 265 AISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHA 324
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF--MPERDVVSWTGIIVGCGQNGRA 504
+ ++ GF+ +SL+DMY KCG I +F M +RD+VSWT II+GC +G A
Sbjct: 325 YIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA 384
Query: 505 KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYC 564
+A++ F+EM+ +KP + F+ VL+AC HAGLV+E W F SM+ ++G+ P LEHY
Sbjct: 385 LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAA 444
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
+ DLLG+AG ++A I+ M +P ++W+++L AC H N +L + ++L P +
Sbjct: 445 VADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGN 504
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+V++SN+Y+ W +K+R +K G KK SWIEV +
Sbjct: 505 MGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGN 549
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 150/294 (51%), Gaps = 25/294 (8%)
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
C ++L Q + ++A W +I Y + ++ + + S G+ D + F
Sbjct: 22 CHVKQLHAQIVKTTKATPHSLA-WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFP 80
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG------------- 370
S L+A +FN A +H ++ G+ D + L+++Y++
Sbjct: 81 SLLRASTLFKHFN--LAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQAR 138
Query: 371 ---------NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+ S +LF R+P +DVV+W+ +I G ++G+ A + ++M N +
Sbjct: 139 HNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPD 198
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
F +SS+L + + A++ +GK++H + ++ GF+K+ +SLIDMY KC +++ + F
Sbjct: 199 SFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFH 258
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+ RD +SW II GC QNGR + + +F+ M++ ++KP +++F V+ AC H
Sbjct: 259 LLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAH 312
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 207/532 (38%), Gaps = 147/532 (27%)
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
A + ++W ++ Y S+ ++ +N + +G + P+ ++ ++L+A +L +L
Sbjct: 37 ATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFG-ISPDRHLFPSLLRASTLFKHFNLA 95
Query: 125 RLIHERITREKLEYDTVLMNTLLDMY-------------------------VKCGSLTRK 159
+ +H + R +D N L++MY VK S+ RK
Sbjct: 96 QSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSV-RK 154
Query: 160 LFDQYSNWAASAYGNVALWNSMLSG----------------------------------- 184
LFD+ +V WN++++G
Sbjct: 155 LFDRMP------VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
GK++H + ++ GF+K+ +SLIDMY KC +++ + F+ + RD +SW
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISW 268
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
II GC + FDQ + + M+ V
Sbjct: 269 NSIIAGCVQ----------------------NGRFDQ----------GLGFFRRMLKEKV 296
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
Q +F+S + AC +L N Q+H I+ G++ +
Sbjct: 297 KPMQ--------------------VSFSSVIPACAHLTALN--LGKQLHAYIIRLGFDDN 334
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLP--KKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ S+L+D+YA+ GN+K A +F+++ +D+V+W+ +IMGC HG A LF +M
Sbjct: 335 KFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM 394
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRG-----KQVHAFCVKRGFEKEDITLTSLIDMYL 468
+ +VL CS + G F V G E ++ D+
Sbjct: 395 LVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEH----YAAVADLLG 450
Query: 469 KCGEIDDGLALFKFMPERDVVS-WTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
+ G +++ M E S W+ ++ C RA + I ++++ L
Sbjct: 451 RAGRLEEAYDFISNMGEEPTGSVWSTLLAAC----RAHKNIELAEKVVNKIL 498
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 77/291 (26%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADF----------------------TSLNDAHK 59
+SLH +I+ G D++T N L++MY+ F ++ K
Sbjct: 95 AQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRK 154
Query: 60 LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
LFD M +++VSW T++ N A+ + M + ++ P+ F S++L +
Sbjct: 155 LFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGK-ENLRPDSFTLSSILPIFTEHA 213
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVAL 177
++ G+ IH R + D + ++L+DMY KC + + F SN A +
Sbjct: 214 NVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAIS------ 267
Query: 178 WNSMLSG--------------------------------------------GKQVHAFCV 193
WNS+++G GKQ+HA+ +
Sbjct: 268 WNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYII 327
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF--MPERDVVSWTGIIVGC 242
+ GF+ +SL+DMY KCG I +FN M +RD+VSWT II+GC
Sbjct: 328 RLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGC 378
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 52/330 (15%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ ++ +GK +H I++G +D+F G++L+ MYA T + + F ++ ++ +SW +
Sbjct: 211 EHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNS 270
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ N R + + + ML+ V+P +S+V+ AC+ L+LG+ +H I R
Sbjct: 271 IIAGCVQNGRFDQGLGFFRRMLK-EKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL 329
Query: 135 KLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYS-------NWAA---------SAYGNVA 176
+ + + ++LLDMY KCG+ + R +F++ +W A A V+
Sbjct: 330 GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
L+ ML G VK + V +++ G +D+G FN M +RD
Sbjct: 390 LFEEMLVDG-------VKPCY----VAFMAVLTACSHAGLVDEGWKYFNSM-QRDF---- 433
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY------SSW-----AASAYGNVA 285
G+ G +A+ D+ L EA S W A A+ N+
Sbjct: 434 GVAPGLEH-----YAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIE 488
Query: 286 LWNSMISGYVL-NEQNEEAITLLSHIHSSG 314
L +++ +L + N A ++S+I+S+
Sbjct: 489 LAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD--EMARKNIV 70
C ++ GK LH II+ G + F ++LL MYA ++ A +F+ EM +++V
Sbjct: 310 CAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMV 369
Query: 71 SWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHER 130
SWT ++ + A+ L+ ML G V+P + AVL ACS +G +D G
Sbjct: 370 SWTAIIMGCAMHGHALDAVSLFEEMLVDG-VKPCYVAFMAVLTACSHAGLVDEGWKYFNS 428
Query: 131 ITRE-----KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
+ R+ LE+ + D+ + G L + +D SN G+V W+++L+
Sbjct: 429 MQRDFGVAPGLEH----YAAVADLLGRAGRL-EEAYDFISNMGEEPTGSV--WSTLLAA 480
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 309/655 (47%), Gaps = 86/655 (13%)
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
++ K+ W +++ A + + P A+ + M + +V N F + A+LKAC+ L
Sbjct: 13 ISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAH-AVPSNNFTFPALLKACAALRRLLP 70
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS 183
+H +TR L D L+D Y KCG AY +++ M
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGH---------------AYYAAQVFDEMPE 115
Query: 184 GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP-----------ERDV 232
G V V+ T+LI Y G +D+ F M DV
Sbjct: 116 GSVDV-------------VSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDV 162
Query: 233 VSWTGII----VGC-------------------FECSCFTLSALVDMYSNCNVLCEARKL 269
VS ++ VGC F S +++V MYS C + A ++
Sbjct: 163 VSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRV 222
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI---DSYTFTSAL 326
F+ +V WNS+ISG+ LN + E A+ + S G + T + L
Sbjct: 223 FNGIPI----EQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALL 278
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYEL----DYIVGSNLIDLYARLGNVKSALELFHRL 382
K+C L + + VH I + L D +V + L+D++AR GN+ A E+F +
Sbjct: 279 KSCAELGCVET--SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV------NQFIISSVLKVCSCLA 436
K+VV WS +I G + A LFR M+ V N + SV+ CS L
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE--RDVVSWTGI 494
+ R +H + V G +++ ++LIDM KCG+I+ G +F M E R VVSW+ +
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYG 554
I G +G K A+ F EM +PNEIT++ VLSAC HAGLVE+ + F SM+ +YG
Sbjct: 457 IGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYG 516
Query: 555 LEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIA 614
+ P +HY C+VDLLG+AG D+A +I MP K D +W S+L AC H N KL I+
Sbjct: 517 MSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVE 576
Query: 615 EQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+++L+ +V+L+N+Y G WD + ++R ++ G +K G S+IE+ +
Sbjct: 577 KKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGN 631
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 228/531 (42%), Gaps = 54/531 (10%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK-- 67
L+ C R + +H + + GL+ D F+ L+ Y A ++FDEM
Sbjct: 59 LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV 118
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNH---MLEYGSVEPNG---FMYSAVLKACSL---S 118
++VSWT +++AY+SN + A + M + E G A++ AC++ S
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVA 176
L G +H + + T L N+++ MY C + ++F N +V
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVF----NGIPIEQRDVV 234
Query: 177 LWNSMLSG----GKQVHAF-----CVKRG---FEKEDVTLTSLIDMYLKCGEIDDGLALF 224
WNS++SG G+ A V G E VT+ +L+ + G ++ +
Sbjct: 235 SWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH 294
Query: 225 NFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
++ R + ++V L+AL+DM++ C L AR++FD NV
Sbjct: 295 EYISSRH----SSLLVA---KDVVVLTALLDMHARCGNLALAREIFDGVEG------KNV 341
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI------DSYTFTSALKACINLLNFNSR 338
W++MI+GY EEA+ L + G + ++ T S + AC L SR
Sbjct: 342 VCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL--GASR 399
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK--KDVVAWSGLIMG 396
A +H V +G + D + S LID+ A+ G+++ ++F + + + VV+WS +I
Sbjct: 400 SASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGA 459
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEK 455
HG A LF +M + N+ SVL CS + +GK K G
Sbjct: 460 EGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSP 519
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAK 505
L+D+ + G +D+ + MP + D+ W ++ C +G K
Sbjct: 520 TGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCK 570
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 238/420 (56%), Gaps = 11/420 (2%)
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+L+ MYS C L AR++FD+ S ++ WNSMISGY +A+ L +
Sbjct: 166 SLITMYSRCGELGCARRVFDEISE------KDLVSWNSMISGYSRMGYAGDAVGLFGEMR 219
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN 371
+G D T S L AC +L + + G +V + +L+ VGS LI +Y + G+
Sbjct: 220 DAGFEPDEMTLVSILGACGDLGDLG--LGSWIEGFVVENEMDLNSFVGSALIGMYGKCGD 277
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+ SA +F R+ KKDVV W+ +I G ++G++ A +LF M S + ++ + VL
Sbjct: 278 LSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSA 337
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ + +L GK + + +RG + + T+LIDMY KCG +DD L +F+ MP+++ VSW
Sbjct: 338 CASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSW 397
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQ--SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
+I +GR +E+++ F+ M + ++PN+I+F+GVLSAC HAGLV+E +F M
Sbjct: 398 NAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLM 457
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+GL P +EH+ CMVDLL +AG +A I +MP KPD+ + ++L AC+ N +
Sbjct: 458 SSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDV 517
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
+ LL P + Y++ S ++A + WD +++R ++ G K G SWIE+ +
Sbjct: 518 SERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIEN 577
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 241/526 (45%), Gaps = 72/526 (13%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
+++ L+ C +S++Q +H ++I + + F LL + D N+A LF ++
Sbjct: 33 KLLSLLKQCTSTKSLQQ---IHTQMIINAIHKPNF----LLHRFIDLKDFNNASLLFSQI 85
Query: 65 ARKNIVSWTTMVTAYTSN-KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
N ++ M+ T+ ++ N I Y M ++G + PN F Y V AC+ L+
Sbjct: 86 PYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFG-IRPNNFTYPFVFIACANLLVLNH 144
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSM 181
G+ H + + L D + ++L+ MY +CG L R++FD+ S ++ WNSM
Sbjct: 145 GQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISE------KDLVSWNSM 198
Query: 182 LSG-------GKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDD-GLALFNFMPERD 231
+SG G V F R GFE +++TL S++ CG++ D GL
Sbjct: 199 ISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILG---ACGDLGDLGLG--------- 246
Query: 232 VVSWT-GIIV-GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
SW G +V + + F SAL+ MY C L AR++FD+ +V WN+
Sbjct: 247 --SWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRM------VKKDVVTWNA 298
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVT 349
MI+GY N ++EAI L S + SG+ D T L AC ++ + F +
Sbjct: 299 MITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD--FGKWLDTYASE 356
Query: 350 SGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLL 409
G + D V + LID+YA+ G++ AL +F +P+K+ V+W+ +I HG + L
Sbjct: 357 RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSL 416
Query: 410 FRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS------- 462
F+ M V IS + + +C VHA V G + D+ +S
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSAC---------VHAGLVDEGRQLFDLMSSSFGLVPKI 467
Query: 463 -----LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
++D+ + G + + + MPE+ G ++G Q R
Sbjct: 468 EHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRR 513
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 21/403 (5%)
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
T +I+ F L +D+ N A LF Q Y N +N MI G
Sbjct: 52 TQMIINAIHKPNFLLHRFIDLKDFNN----ASLLFSQI------PYPNEYAFNIMIRGLT 101
Query: 296 LNEQN-EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
Q I + G+ +++T+ AC NLL N H ++ SG
Sbjct: 102 TTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNH--GQCAHSGVLKSGLCA 159
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V +LI +Y+R G + A +F + +KD+V+W+ +I G ++ G A LF +M
Sbjct: 160 DGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMR 219
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
++ + ++ + S+L C L L G + F V+ + ++LI MY KCG++
Sbjct: 220 DAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLS 279
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F M ++DVV+W +I G QNG + EAI F M +S + P++IT +GVLSAC
Sbjct: 280 SARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACA 339
Query: 535 HAGLVE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
G ++ W + E GL+ + ++D+ + G DDA ++ +MP K ++
Sbjct: 340 SIGALDFGKW--LDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQK-NEVS 396
Query: 594 WASMLKACETHNNTK----LVSIIAEQLLATSPEDPSKYVMLS 632
W +M+ A H + L ++++ A P D S +LS
Sbjct: 397 WNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLS 439
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 16/237 (6%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L CG + G + +++ + + F G+ L+ MY L+ A ++F
Sbjct: 226 DEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF 285
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D M +K++V+W M+T Y N + AI L++ M E G V P+ VL AC+ G L
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESG-VNPDKITLVGVLSACASIGAL 344
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
D G+ + + L+ D + L+DMY KCGSL D + N WN+M
Sbjct: 345 DFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLD----DALRVFEDMPQKNEVSWNAM 400
Query: 182 LSG----GKQVHAFCVKRGFEKE-------DVTLTSLIDMYLKCGEIDDGLALFNFM 227
+S G+ + + + KE D++ ++ + G +D+G LF+ M
Sbjct: 401 ISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLM 457
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 257/522 (49%), Gaps = 55/522 (10%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM--PERDVVSWTGIIVGC 242
+ +HA G ++ +SL+ YL+ G + ALF+ M P+R VV W+ ++
Sbjct: 36 ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVA-- 93
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+A D +L E R+ NV WN ++SG + + +
Sbjct: 94 ------AHAARGDAEGAWRLLEEMRR--------DGGVEPNVITWNGLVSGLNRSGRARD 139
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L+ +H G+ T S + + + S Q+HG V +G D V + L
Sbjct: 140 AVVALATMHGEGLLRPDATGVSCALSAVGDVGLVS-VGQQLHGYAVKAGCRADACVVTAL 198
Query: 363 IDLYARLGNVKSALELFH---------------------------RLPKK--------DV 387
ID+Y + G + +F RL K+ +V
Sbjct: 199 IDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNV 258
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
V+W+ ++ C ++G + A FR+M + N I VL + +A+L G+ H F
Sbjct: 259 VSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCF 318
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+++GF + ++L+DMY KCG + D +F M R+VVSW +I G G A A
Sbjct: 319 ALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNA 378
Query: 508 IAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVD 567
+ F M++ + KP+ +TF +L+AC AGL EE F M EYG+ P +EHY CMV
Sbjct: 379 VWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVT 438
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSK 627
LLG+AG D+A LI++MPF+PD IW S+L +C H N L + AE+L PE+
Sbjct: 439 LLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGN 498
Query: 628 YVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
YV+LSN+YA+ MWD +++VR+ K +G +K+ G SWIE+ +
Sbjct: 499 YVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKN 540
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 208/492 (42%), Gaps = 54/492 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR--KNIVSWTTM 75
++ ++LH GL++D F ++LL Y + +A LFD M R + +V W+ +
Sbjct: 32 TLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSAL 91
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
V A+ + A RL M G VEPN ++ ++ + SG R +
Sbjct: 92 VAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSG-----RARDAVVALAT 146
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKR 195
+ + +L V C A SA G+V L +S G+Q+H + VK
Sbjct: 147 MHGEGLLRPDATG--VSC--------------ALSAVGDVGL----VSVGQQLHGYAVKA 186
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G + +T+LIDMY KCG+ + + +F+ DV S +I G
Sbjct: 187 GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG-------------- 232
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+ N V CEA +LF ++ NV W S+++ V N ++ EA+ + + G
Sbjct: 233 LSRNAQV-CEALRLFKEFVDRGVEL--NVVSWTSIVACCVQNGKDLEAVEFFREMQAQGT 289
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+S T L A N+ H + G+ D V S L+D+YA+ G VK A
Sbjct: 290 EPNSVTIPCVLPAFANVAAL--MHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDA 347
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F + ++VV+W+ +I G +G A +F M+ Q + + +L C+
Sbjct: 348 RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQA 407
Query: 436 ASLRRG----KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVS 490
G K++H + G ++ + + G++D+ L MP E D
Sbjct: 408 GLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYI 464
Query: 491 WTGIIVGCGQNG 502
W ++ C +G
Sbjct: 465 WGSLLGSCRVHG 476
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 45/280 (16%)
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D + +A K+C L A +H + SG D V S+L+ Y RLG +A
Sbjct: 19 DPHLLPTAFKSCPTL-----PLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARA 73
Query: 378 LFHRLPK--KDVVAWSGLIMGCTKHGLNSLAYLLFRDM-------------------INS 416
LF +P+ + VV WS L+ G A+ L +M +N
Sbjct: 74 LFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNR 133
Query: 417 NQDVNQFI------------------ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ + +S L + + G+Q+H + VK G +
Sbjct: 134 SGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADAC 193
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+T+LIDMY KCG+ + + +F DV S +I G +N + EA+ F+E +
Sbjct: 194 VVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRG 253
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPH 558
++ N +++ +++ C G EA F M+ + G EP+
Sbjct: 254 VELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQ-GTEPN 292
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL G + G+ LH +K G D L+ MY + ++FDE + +
Sbjct: 163 ALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMD 222
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG-DLDLGRLI 127
+ S ++ + N + A+RL+ ++ G VE N +++++ C +G DL+
Sbjct: 223 VASCNALIAGLSRNAQVCEALRLFKEFVDRG-VELNVVSWTSIVACCVQNGKDLEAVEFF 281
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
E + + E ++V + +L A+ NVA L G+
Sbjct: 282 RE-MQAQGTEPNSVTIPCVL----------------------PAFANVA----ALMHGRS 314
Query: 188 VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
H F +++GF + ++L+DMY KCG + D +F+ M R+VVSW +I G
Sbjct: 315 AHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGG 368
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
+ ++ + K C L R +HA G ++ +SL+ YL+ G + ALF
Sbjct: 19 DPHLLPTAFKSCPTLPLAR---ALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALF 75
Query: 481 KFMP--ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSACRHAG 537
MP +R VV W+ ++ G A+ A +EM + ++PN IT+ G++S +G
Sbjct: 76 DGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSG 135
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+A +M E L P C + +G G +QL
Sbjct: 136 RARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 245/460 (53%), Gaps = 25/460 (5%)
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ MY K G++ +AL+ M +++ +S +I G Y L AR
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILING---------------YVRAGDLVSAR 45
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
K+FD+ + WN+MI+G + E NEE ++L +H G D YT S
Sbjct: 46 KVFDEMPDR------KLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFS 99
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
L + + Q+HG + G ELD +V S+L +Y R G ++ + +P +++
Sbjct: 100 GSAGLRSVS--IGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAF 447
VAW+ LIMG ++G L++ M S N+ +VL CS LA +G+Q+HA
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 448 CVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEA 507
+K G ++SLI MY KCG + D F + D V W+ +I G +G+ EA
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 508 IAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
I F M Q+ ++ NE+ FL +L AC H+GL ++ +F M +YG +P L+HY C+V
Sbjct: 278 IKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AGC D AE +I MP KPD IW ++L AC H N ++ + +++L P D +
Sbjct: 338 DLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSA 397
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIE 665
YV+L+NV+A+ W +S+VRK+ + K +K+AG+SW E
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
RS+ G+ +H IKYGL D+ ++L MY L D + M +N+V+W T++
Sbjct: 105 RSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
N P + LY M++ PN + VL +CS G+ IH +
Sbjct: 165 MGNAQNGCPETVLYLYK-MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223
Query: 137 EYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-------GGKQVH 189
++++L+ MY KCG L D ++ + +W+SM+S G + +
Sbjct: 224 SSVVAVVSSLISMYSKCGCLG----DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIK 279
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKC---GEIDDGLALFNFMPER 230
F + +V + +++ C G D GL LF+ M E+
Sbjct: 280 LFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 180/460 (39%), Gaps = 130/460 (28%)
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVA 176
GDL ++ER+ ++ +L+N YV+ G L RK+FD+ + +
Sbjct: 8 GDLPSAVALYERMRKKNFMSSNILING----YVRAGDLVSARKVFDEMPDR------KLT 57
Query: 177 LWNSMLSG--------------------------------------------GKQVHAFC 192
WN+M++G G+Q+H +
Sbjct: 58 TWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYA 117
Query: 193 VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC----- 247
+K G E + V +SL MY++ G++ DG + MP R++V+W +I+G + C
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 248 -----FTLSA-------LVDMYSNCNVL----------CEARK------------LFDQY 273
+S V + S+C+ L EA K L Y
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Query: 274 SSW-----AASAYG-----NVALWNSMISGYVLNEQNEEAITLL-SHIHSSGMCIDSYTF 322
S AA A+ + +W+SMIS Y + Q +EAI L S + M ++ F
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAF 297
Query: 323 TSALKACINLLNFNSRFALQVHGL------IVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
+ L AC S L+ GL + G++ + ++DL R G + A
Sbjct: 298 LNLLYAC-------SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 377 ELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDM--INSNQDVNQFIISSVLKVCS 433
+ +P K D V W L+ C H +A +F+++ I+ N ++++V
Sbjct: 351 AIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANV----- 405
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
AS +R + V V++ +++ + I + GE+
Sbjct: 406 -HASAKRWRDVSE--VRKSMRDKNVKKEAGISWFEHKGEV 442
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C QG+ +H IK G S + ++L+SMY+ L DA K F E
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++ V W++M++AY + + + AI+L+N M E +E N + +L ACS SG D G
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKG 313
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 205/719 (28%), Positives = 325/719 (45%), Gaps = 102/719 (14%)
Query: 1 MDLR----RIVEALRHCGQR--RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSL 54
+D+R R E L+ C + S +++H +I G N LL MY ++L
Sbjct: 5 LDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNL 64
Query: 55 NDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKA 114
A +LF+E+ + ++ TT++TAY + ++N Y + Y+A++
Sbjct: 65 VYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMR---DSVFYNAMITG 121
Query: 115 CSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGN 174
+ +GD + + R+ D ++L V LF
Sbjct: 122 YAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV--------LF------------- 160
Query: 175 VALWNSMLSGGKQVHAFCVKRGFE-KEDVTLTSLIDMYLK--------CGEIDDGLALFN 225
+ N G Q+H VK G L +L+ +Y+K C + LF+
Sbjct: 161 --VGNEQQCG--QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFD 216
Query: 226 FMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVA 285
MP+RD ++WT +I G Y + L AR++F+ +A
Sbjct: 217 EMPKRDELTWTTMITG---------------YVRNDDLNGAREVFEAMVENLGAA----- 256
Query: 286 LWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG 345
WN+MISGYV +EA+TL + G+ D T+T+ + AC N+ +F + QVH
Sbjct: 257 -WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSF--QMGKQVHA 313
Query: 346 LIVTSGYELDYI----VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG--------- 392
I+ + ++ V + LI LY + V A ++F+ +P ++++ W+
Sbjct: 314 YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAG 373
Query: 393 ----------------------LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+I G ++G LF+ M + F + L
Sbjct: 374 RMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALT 433
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS L +L G+Q+HA V G+E ++I MY KCG ++ ++F MP D+VS
Sbjct: 434 ACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVS 493
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I GQ+G +AI F +M++ + P+ ITFL VL+AC HAGLVE+ F SM
Sbjct: 494 WNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSML 553
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
YG+ P +HY MVDL +AG F A +I MP KP +W ++L C H N L
Sbjct: 554 ESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG 613
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVSS 668
AEQL P++ YV+LSN+YA +G W+ ++KVRK + K+ SWIEV +
Sbjct: 614 IEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVEN 672
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 236/428 (55%), Gaps = 10/428 (2%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
+I + + F + LV MY C L +AR + D+ + V W +MISGY
Sbjct: 36 MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS------VVSWTTMISGYSQT 89
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E++ EA+ L + +G + YT + L +C + QVH L+V + +E
Sbjct: 90 ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQ--GKQVHSLLVKTNFESHMF 147
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS+L+D+YA+ N++ A +F LP++DVV+ + +I G + GL+ A LFR + +
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG 207
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
N ++++ S LASL GKQVHA +++ SLIDMY KCG++
Sbjct: 208 MQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSR 267
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
+F M ER VVSW +++G G++G E I+ F+++ +KP+ +T L VLS C H G
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGG 326
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
LV+E IF ++ E H HY C++DLLG++G + A LI MPF+ +IW S+
Sbjct: 327 LVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSL 386
Query: 598 LKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG-KKLGE 656
L AC H N + ++A++LL PE+ YV+LSN+YA GMW + KVRK +K
Sbjct: 387 LGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 446
Query: 657 KKAGMSWI 664
K+ G SWI
Sbjct: 447 KEPGQSWI 454
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 120/217 (55%), Gaps = 10/217 (4%)
Query: 320 YTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+ + +A+ ACI R AL QVH ++T+ Y +G+ L+ +Y R G + A
Sbjct: 11 HEYEAAITACIE------RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ R+P++ VV+W+ +I G ++ + A LF M+ + N++ +++VL CS
Sbjct: 65 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S+ +GKQVH+ VK FE +SL+DMY K I + +F +PERDVVS T II
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
G Q G +EA+ F+++ ++ N +TF +++A
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 221
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 177/446 (39%), Gaps = 120/446 (26%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A+ C +RR++ +G+ +H R+I +F G L++MY +L+DA + D M ++
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWTTM++ Y+ +R A+ L+ ML G + PN + + VL +CS + G+ +H
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY------------SNWAASAYGN 174
+ + E + ++LLDMY K ++ R++FD S +A
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 175 VAL--------------------WNSMLSG------GKQVHAFCVKRGFEKEDVTLTSLI 208
AL + LSG GKQVHA +++ SLI
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 254
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARK 268
DMY KCG++ +F+ M ER VVSW +++G
Sbjct: 255 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG--------------------------- 287
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
YG L E I+L +H + DS T + L
Sbjct: 288 ------------YGRHGL-------------GHEVISLFKDLHKE-VKPDSVTLLAVLSG 321
Query: 329 CINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN-----------LIDLYARLGNVKSAL 376
C HG +V G ++ D +V +IDL R G ++ AL
Sbjct: 322 C-------------SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368
Query: 377 ELFHRLPKKDVVA-WSGLIMGCTKHG 401
L +P + + W L+ C H
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHA 394
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C +SI QGK +H ++K +F G++LL MYA ++ +A ++FD +
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VS T +++ Y A+ L+ + G ++ N ++ ++ A S LD G+
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 232
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ-----YSNWAA--SAYGNVA 176
+H I R++L + L N+L+DMY KCG L +R++FD +W A YG
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 177 LWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN-FMPERDVVSW 235
L + ++S K +H + + + VTL +++ G +D+GL +F+ + E+ +
Sbjct: 293 LGHEVISLFKDLH-----KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLH 347
Query: 236 TG 237
TG
Sbjct: 348 TG 349
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
+ + C +L G+QVHA + + T L+ MY++CG +DD + MPER
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
VVSWT +I G Q R EA+ F +M+++ PNE T VL++C + + +
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
S+ + E H+ ++D+ ++ +A ++ +P
Sbjct: 135 -SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 254/482 (52%), Gaps = 24/482 (4%)
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+Q+HAF G + T L+ Y G+ LF +P+R+V+SW +I G
Sbjct: 62 RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGG---- 117
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y L ARKLFD+ + NVA WN+M++G + NEE++
Sbjct: 118 -----------YVKNGDLETARKLFDEMPAR------NVATWNAMVAGLTNSGLNEESLG 160
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
+ GM D Y S + C L + S QVH +V SG + D VGS+L +
Sbjct: 161 FFFAMRREGMQPDEYGLGSLFRCCAGLRDVVS--GRQVHAYVVRSGLDRDMCVGSSLAHM 218
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y R G ++ LP ++V+ + I G T++G A F M + + N
Sbjct: 219 YMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTF 278
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S + CS LA+L +G+Q+HA +K G +K +TSL+ MY +CG + D +
Sbjct: 279 VSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG 338
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
D+V + +I G +G ++A+ F++M+ + +PNE+TFL +L AC H+GL +E
Sbjct: 339 TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNC 398
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M YGL+P ++HY C+VDLLG++GC ++AE LI MP +PD IW ++L AC+T
Sbjct: 399 FELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQK 458
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
+ IAE+++ P D + YV+LSN+ AT W+ +SKVR+ ++ K+ G+SW+
Sbjct: 459 KFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWV 518
Query: 665 EV 666
E+
Sbjct: 519 EL 520
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 46/415 (11%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ + N L+ Y L A KLFDEM +N+ +W MV T++ ++ + M
Sbjct: 106 RNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 165
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G ++P+ + ++ + C+ D+ GR +H + R L+ D + ++L MY++CG
Sbjct: 166 RREG-MQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGF 224
Query: 156 LTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------VHAFCVKR--GFEKEDVTLTS 206
L D + A N+ N+ +SG Q + FC+ R G E VT S
Sbjct: 225 LR----DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVS 280
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
+ + G + + V + +++LV MYS C L ++
Sbjct: 281 AVTSCSDLAALAQGQQIHALAIKTGVDKVVPV-----------MTSLVHMYSRCGCLGDS 329
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++ +YS ++ L ++MIS Y + ++A+ L + ++G + TF + L
Sbjct: 330 ERVCLEYSGT------DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLL 383
Query: 327 KACINLLNFNSRFALQVHGL----IVTSGYELDYIVG--SNLIDLYARLGNVKSALELFH 380
AC S L+ G+ ++T Y L V + ++DL R G + A +L
Sbjct: 384 YAC-------SHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLIL 436
Query: 381 RLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN-SNQDVNQFIISSVLKVCS 433
+P + D V W L+ C +A + +I D +++ S ++ S
Sbjct: 437 SMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATS 491
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R C R + G+ +H +++ GL +D+ G++L MY L D + NI
Sbjct: 181 FRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNI 240
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS T ++ T N A+ + M G VE N + + + +CS L G+ IH
Sbjct: 241 VSCNTTISGRTQNGDAEGALEFFCLMRGAG-VEANAVTFVSAVTSCSDLAALAQGQQIHA 299
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS---- 183
+ ++ +M +L+ MY +CG L + ++ +YS ++ L ++M+S
Sbjct: 300 LAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGT------DLVLCSAMISAYGF 353
Query: 184 ---GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G K V F + G E +VT +L+ G D+G+ F M
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELM 402
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
V A+ C ++ QG+ +H IK G+ + + +L+ MY+ L D+ ++ E +
Sbjct: 278 FVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS 337
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++V + M++AY + A+ L+ M+ G+ EPN + +L ACS SG D G
Sbjct: 338 GTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGA-EPNEVTFLTLLYACSHSGLKDEGM 396
Query: 126 LIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG 184
E +T+ L+ ++D+ + G L + D + G +W ++LS
Sbjct: 397 NCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLN-EAEDLILSMPVQPDG--VIWKTLLSA 453
Query: 185 GKQVHAF 191
K F
Sbjct: 454 CKTQKKF 460
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 234/427 (54%), Gaps = 10/427 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F S F ++L+ +Y C + +AR++FD + ++ W S+I+GY N+ +E
Sbjct: 95 FAGSVFLDNSLIHLYCKCGAVADARRVFDGMPA------RDMCSWTSLIAGYAQNDMPDE 148
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ LL + + +TF S LKA + +S Q+H L V + D VGS L
Sbjct: 149 ALGLLPGMLRGRFKPNGFTFASLLKAA--GASASSGIGEQIHALTVKYDWHDDVYVGSAL 206
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YAR G + A+ +F +L K+ V+W+ LI G + G L+F +M + +
Sbjct: 207 LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F SSV + + +L +GK VHA +K G +++DMY K G + D +F
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR 326
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ ++DVV+W ++ Q G +EA+ +F+EM + + N+ITFL +L+AC H GLV+E
Sbjct: 327 VDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEG 386
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK EY LEP ++HY +VDLLG+AG +DA I +MP KP +W ++L +C
Sbjct: 387 KQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCR 445
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N K+ A+ + P+D V+L N+YA+ G WD+ ++VRK K G KK
Sbjct: 446 MHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPAC 505
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 506 SWVEIEN 512
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 64/413 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + RS+ +++H + + +F N+L+ +Y ++ DA ++FD M +++ SW
Sbjct: 74 CARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSW 133
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ Y N P+ A+ L ML G +PNGF ++++LKA S +G IH
Sbjct: 134 TSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQ--- 187
+ D + + LLDMY +CG + + FDQ + N WN++++G +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES------KNGVSWNALIAGFARKGD 246
Query: 188 ------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ A + GFE T +S+ G ++ G + M I
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM-----------IKS 295
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
S F + ++DMY+ + +ARK+FD+ +V WNSM++ +
Sbjct: 296 GERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK------KDVVTWNSMLTAFAQYGLGR 349
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--------- 352
EA+T + G+ ++ TF S L AC HG +V G
Sbjct: 350 EAVTHFEEMRKCGVHLNQITFLSILTAC-------------SHGGLVKEGKQYFDMMKEY 396
Query: 353 ----ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKH 400
E+D+ V ++DL R G + AL ++P K A W L+ C H
Sbjct: 397 NLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 6/280 (2%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ S + AC + + A+ H + S + + ++LI LY + G V A +F
Sbjct: 67 YHSLITACARYRSLDDARAIHAH--LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P +D+ +W+ LI G ++ + A L M+ N F +S+LK AS G
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+HA VK + + ++L+DMY +CG +D +A+F + ++ VSW +I G +
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLE 560
G + + F EM ++ + T+ V SA G +E+ W +K L +
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ ++D+ ++G DA ++ + K D W SML A
Sbjct: 305 N--TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA 341
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ G S G+ +H +KY D++ G+ LL MYA ++ A +FD++ KN
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ + + ++ M G E F YS+V A + G L+ G+ +H
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS---- 183
+ + + NT+LDMY K GS+ RK+FD+ +V WNSML+
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK------KDVVTWNSMLTAFAQ 344
Query: 184 ---GGKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G + V F R G +T S++ G + +G F+ M E
Sbjct: 345 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 264/546 (48%), Gaps = 67/546 (12%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+ G+ VHA RG E + T+L +MY KC D +F+ MP RD V+W ++ G
Sbjct: 32 LATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAG 91
Query: 242 ----------------------------------------------CFECSCFTL----- 250
C E F L
Sbjct: 92 YARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLD 151
Query: 251 ------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
+A++D Y C + AR +FD N WN+MI GY N EA+
Sbjct: 152 ELVNVSTAVLDAYCKCGAVEAARAVFD------CMPVRNSVSWNAMIDGYADNGNATEAM 205
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + G+ + + +AL+AC L + +VH L+V G + V + LI
Sbjct: 206 ALFWRMVQEGVDVTDASVLAALQACGELGYLDE--VRRVHELLVRVGLSSNVSVTNALIT 263
Query: 365 LYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
YA+ A ++F+ L KK ++W+ +I+G T++ A LF M N + F
Sbjct: 264 TYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSF 323
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ SV+ + ++ + + +H + ++ +++ LT+LIDMY KCG + LF
Sbjct: 324 TLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSA 383
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+R V++W +I G G +G + A+ F+EM + PNE TFL VL+AC HAGLV+E
Sbjct: 384 RDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQ 443
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
F SMK +YGLEP +EHY MVDLLG+AG D+A I MP +P +++ +ML AC+
Sbjct: 444 KYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKL 503
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMS 662
H N +L A+ + PE+ +V+L+N+YA MW +++VR A +K G +K G S
Sbjct: 504 HKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWS 563
Query: 663 WIEVSS 668
I++ +
Sbjct: 564 IIQLKN 569
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 220/506 (43%), Gaps = 33/506 (6%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR L+ C R + G+++H ++ GL+ + L +MY DA ++FD
Sbjct: 16 LRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFD 75
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHML-EYGSVEPNGFMYSAVLKACSLSGDL 121
M ++ V+W +V Y N P+ A+ M E G P+ +VL AC+ + L
Sbjct: 76 RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
R +H R L+ + +LD Y KCG++ R +FD N WN
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFD------CMPVRNSVSWN 189
Query: 180 SMLSG----GKQVHAFCV--KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+M+ G G A + + E DVT S++ CGE+ ++ E V
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGEL-------GYLDEVRRV 242
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ VG + +AL+ Y+ C A ++F++ + WN+MI G
Sbjct: 243 HELLVRVG-LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRIS-----WNAMILG 296
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN-FNSRFALQVHGLIVTSGY 352
+ NE E+A L + + + DS+T S + A ++ + +R+ +HG +
Sbjct: 297 FTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARW---IHGYSIRHQL 353
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
+ D V + LID+Y++ G V A LF + V+ W+ +I G HG A LF +
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCG 471
M + N+ SVL CS + G++ A K G E +++D+ + G
Sbjct: 414 MKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAG 473
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVG 497
++D+ + K MP +S G ++G
Sbjct: 474 KLDEAWSFIKNMPIEPGISVYGAMLG 499
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/627 (30%), Positives = 289/627 (46%), Gaps = 75/627 (11%)
Query: 103 PN---GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--T 157
PN F + +L+ CS S L G+ +H+ I L++ ++ L+ MY CG L
Sbjct: 18 PNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSA 77
Query: 158 RKLFDQYSN-----WAA---------------SAYGNVALWNSM---------------- 181
+ LFD+ S W A Y + L +
Sbjct: 78 QALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQL 137
Query: 182 --LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
L G QVH V G E + SLIDMY K G++ G +F+ M ERDV+SW +I
Sbjct: 138 LWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMI 197
Query: 240 VG--C------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
G C FE T + ++D Y + EA ++F+Q
Sbjct: 198 SGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKE---- 253
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI-DSYTFTSALKACINLLNFNSR 338
N+ +++SGY +E+++ + + S + D + +S L +C +L
Sbjct: 254 --PNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCG 311
Query: 339 FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCT 398
+ +G+ G+ L+ +Y + ++ AL +F + + DVV W+ +I+G
Sbjct: 312 QEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFV 371
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+ LA F M S NQ IS+VL C L+ GKQVHA+ K F
Sbjct: 372 DLEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIP 427
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
+LI MY KCG I ++F M RD+VSW +I G G +G + A+ ++M S
Sbjct: 428 VWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSD 487
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
+ PN +TF LSAC H+GLV+E +F +M ++G P +EH+ C+VDLL +A +DA
Sbjct: 488 VCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDA 547
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
I +MP KP K IW+++L AC N + + AEQL PE YV LSN+YA
Sbjct: 548 VGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARA 607
Query: 639 GMWDSLSKVRKAGKKLG-EKKAGMSWI 664
G WD VRK + G K +G SWI
Sbjct: 608 GRWDDAVAVRKLMEDRGLVKPSGYSWI 634
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 159/640 (24%), Positives = 271/640 (42%), Gaps = 127/640 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +++ QGK LH II GL F L+ MYAD L A LFD++++ N+
Sbjct: 30 LQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNV 89
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+WT ++ Y+ N + +R Y+ M G V P+ +++ V +AC L++G +H+
Sbjct: 90 FAWTAILGFYSRNGLSDECVRTYSEMKLKG-VLPDKYVFPKVFRACGQLLWLEVGIQVHK 148
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ E+D + N+L+DMY K G + R++FD+ +V WNSM+SG
Sbjct: 149 DVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVE------RDVLSWNSMISGYVC 202
Query: 185 ------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
++ A RGFE + VT +++D Y + G D+ +F + E +++S T +
Sbjct: 203 NGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTL 262
Query: 239 I------------VGCFE-------------------CSCFTLSALV------------- 254
+ +G F SC L ALV
Sbjct: 263 VSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSV 322
Query: 255 --------------DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
MY C + +A +F+ + +V WN+MI G+V E
Sbjct: 323 DSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRF------DVVTWNAMILGFVDLEMG 376
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
A+ S + SG+ + T ++ L AC + + QVH I + + V +
Sbjct: 377 HLALECFSKMQRSGIMNNQITISTVLPAC------DLKSGKQVHAYITKNSFSSVIPVWN 430
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LI +Y++ G + +A +F + +D+V+W+ +I G HGL A L RDM +S+
Sbjct: 431 ALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCP 490
Query: 421 NQFIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
N +S L CS + G ++ H GF + ++D+ + ++D +
Sbjct: 491 NSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGF 550
Query: 480 FKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
+ MP LKP++ + +L+ACR V
Sbjct: 551 IEKMP----------------------------------LKPSKHIWSALLAACRAQQNV 576
Query: 540 EEAWTIFTSMKPEYGLEP-HLEHYYCMVDLLGQAGCFDDA 578
A + + LEP H +Y + ++ +AG +DDA
Sbjct: 577 SVAKLAAEQL---FQLEPEHAGNYVTLSNIYARAGRWDDA 613
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 125/553 (22%), Positives = 220/553 (39%), Gaps = 118/553 (21%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
+ R CGQ ++ G +H ++ G D+ N+L+ MY+ + ++FDEM +
Sbjct: 129 KVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVER 188
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
+++SW +M++ Y N +++ L M G EP+ ++ V+ A G D I
Sbjct: 189 DVLSWNSMISGYVCNGFLEFSVELLASMRIRG-FEPDMVTWNTVMDAYCRMGLCDEAWEI 247
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSG- 184
E+I E + + + TL+ Y + G+ + L F + + A+ ++ +S+L
Sbjct: 248 FEQIK----EPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRV-AFPDLDSLSSVLVSC 302
Query: 185 --------GKQVHAFCVK----RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV 232
G+++H + ++ F K +L+ MY+KC I D L +F M DV
Sbjct: 303 RHLGALVCGQEIHGYGIRSVDSSSFYKS--AGAALLTMYVKCKRIQDALNVFELMDRFDV 360
Query: 233 VSWTGIIVGCFE-------CSCFT------------------------------------ 249
V+W +I+G + CF+
Sbjct: 361 VTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACDLKSGKQVHAYITKN 420
Query: 250 --------LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+AL+ MYS C + A +F S ++ WN+MI G+ ++ +
Sbjct: 421 SFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMIS------RDLVSWNTMIGGFGMHGLGQ 474
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
A+ LL + S +C +S TFTSAL AC + + L H + G+ S
Sbjct: 475 FALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMEL-FHTMTRDFGFTPGMEHFSC 533
Query: 362 LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
++DL AR ++ A+ ++P K WS L+ C S+A L +
Sbjct: 534 VVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQ----- 588
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
L G V +L ++Y + G DD +A+
Sbjct: 589 --------------LEPEHAGNYV-----------------TLSNIYARAGRWDDAVAVR 617
Query: 481 KFMPERDVVSWTG 493
K M +R +V +G
Sbjct: 618 KLMEDRGLVKPSG 630
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 8/244 (3%)
Query: 405 LAYLLFRDMINSNQDVNQFIISS-----VLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+ LF+ I+S N ++SS +L++CS +L +GKQ+H + G +
Sbjct: 1 MKVFLFKRAISSLPTSNPNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFM 60
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
LT L+ MY CG++ ALF + + +V +WT I+ +NG + E + + EM +
Sbjct: 61 LTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGV 120
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
P++ F V AC +E + + G E L+ ++D+ ++G
Sbjct: 121 LPDKYVFPKVFRACGQLLWLEVGIQVHKDVVI-CGCEFDLQVCNSLIDMYSKSGDVGSGR 179
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKL-VSIIAEQLLATSPEDPSKYVMLSNVYATL 638
++ EM + D W SM+ + + V ++A + D + + + Y +
Sbjct: 180 RVFDEM-VERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRM 238
Query: 639 GMWD 642
G+ D
Sbjct: 239 GLCD 242
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 234/414 (56%), Gaps = 10/414 (2%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+++YS + + ++FD+ +++ W+S+IS + NE A+ + +
Sbjct: 66 LINLYSKTQLPLFSLQVFDETPKKSSTT------WSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D + + SA KAC L S VH L V +GY D VGS+L+D+YA+ G +
Sbjct: 120 DGVRPDDHIYPSATKACGFLRR--SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEI 177
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A LF +P+++VV+WSG+I G + A LF+ + + DVN F SSV++VC
Sbjct: 178 GDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVC 237
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S L GK +H C+K F+ ++LI +Y KCG I+ +F +P R++ W
Sbjct: 238 SSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWN 297
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+++ C Q+ + F+EM +KPN I+FL VL AC HAGLVE+ F+ M+ +
Sbjct: 298 SMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMR-D 356
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
YG+EP EHY +VDLLG+AG +A +I +MP +P +++W ++L C H +T++ +
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+A+++L +V+LSN YA G ++ +++RK + G KK G+SW+E
Sbjct: 417 VADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 327 KACINLLNFNS----RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ C LL+F R LQ+H I+ G + +V NLI+LY++ +L++F
Sbjct: 27 QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDET 86
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
PKK WS +I ++ LA FR M+N + I S K C L GK
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
VH VK G+ + +SL+DMY KCGEI D LF MPER+VVSW+G+I G Q
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEH 561
EA+ F++ + + N+ TF V+ C + +E I +K + +
Sbjct: 207 DGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
++ L + G + A Q+ E+P + + +W SML AC H +T+ V + E+ +
Sbjct: 267 --ALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQRVFGLFEE-MGNV 322
Query: 622 PEDPSKYVMLSNVYA 636
P+ LS +YA
Sbjct: 323 GMKPNFISFLSVLYA 337
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 186/447 (41%), Gaps = 98/447 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+ R+I L + RS++QG LH I+K+GL +NL+++Y+ + ++F
Sbjct: 24 NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DE +K+ +W+++++A+ N+ P A++ + ML G V P+ +Y + KAC
Sbjct: 84 DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG-VRPDDHIYPSATKACGFLRRS 142
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGN 174
D+G+ +H + D + ++L+DMY KCG + R LFD+ +W+ YG
Sbjct: 143 DVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY 202
Query: 175 VAL---------------------------------WNSMLSGGKQVHAFCVKRGFEKED 201
L ++ L GK +H C+K F+
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
++LI +Y KCG I+ +F+ +P R++ W +++ C + +
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHA--------------- 307
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+++F + GNV + + IS
Sbjct: 308 ---HTQRVFGLFEEM-----GNVGMKPNFIS----------------------------- 330
Query: 322 FTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
F S L AC + L R + L+ G E + ++L+DL R G ++ A+ +
Sbjct: 331 FLSVLYACSHAGLVEKGR---EYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387
Query: 381 RLPKKDVVA-WSGLIMGCTKHGLNSLA 406
++P + + W L+ GC H +A
Sbjct: 388 QMPMRPTESVWGALLTGCRIHKDTEMA 414
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 59/307 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + CG R GKS+HC +K G D+F G++L+ MYA + DA LFDEM +N
Sbjct: 132 ATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERN 191
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW+ M+ Y A+ L+ L V+ N F +S+V++ CS S L+LG+LIH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQAL-IEDVDVNDFTFSSVIRVCSSSTFLELGKLIH 250
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + + + + L+ +Y KCG + ++FD+ N+ LWNSML
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR------NLGLWNSMLIACA 304
Query: 187 Q---------------------------------VHAFCVKR-----------GFEKEDV 202
Q HA V++ G E E
Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETE 364
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-WTGIIVGC-----FECSCFTLSALVDM 256
SL+D+ + G++ + +++ MP R S W ++ GC E + F +++M
Sbjct: 365 HYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEM 424
Query: 257 YSNCNVL 263
S+ + L
Sbjct: 425 DSSSSGL 431
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/573 (29%), Positives = 285/573 (49%), Gaps = 87/573 (15%)
Query: 146 LLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVK 194
L+ Y CG L R++FD NV LWN M+S ++ F V+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEK------KNVYLWNFMVSEYAKIGDFKESICLFKIMVE 55
Query: 195 RGFE----------------KEDVTLTSLIDMYLKCGEIDDGLALFNFMP----ERDVVS 234
+G E ++ ++ S+I Y+ G + GL ++ M + D+ +
Sbjct: 56 KGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 115
Query: 235 WTGIIVGCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYS 274
++VGC + +L + L+DMYS C L A ++F++
Sbjct: 116 IISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 175
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
NV W SMI+GY + ++ AI LL + G+ +D TS L AC +
Sbjct: 176 E------RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGS 229
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
++ VH I + + V + L+D+YA+ G+++ A +F + KD+++W+ ++
Sbjct: 230 LDN--GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV 287
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G K ++A +L C+ L++L RGK++H + ++ G+
Sbjct: 288 -GELKPDSRTMA--------------------CILPACASLSALERGKEIHGYILRNGYS 326
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ +L+D+Y+KCG + LF +P +D+VSWT +I G G +G EAIA F EM
Sbjct: 327 SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 386
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ ++P+E++F+ +L AC H+GL+E+ W F MK ++ +EP LEHY CMVDLL + G
Sbjct: 387 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGN 446
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
A + I +P PD TIW ++L C +++ +L +AE++ PE+ YV+L+N+
Sbjct: 447 LSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANI 506
Query: 635 YATLGMWDSLSKVR-KAGKKLGEKKAGMSWIEV 666
YA W+ + ++R K GKK K G SWIE+
Sbjct: 507 YAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 539
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 183/433 (42%), Gaps = 106/433 (24%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+DL I+ L C + ++ GK++H IK + I N LL MY+ L+ A ++
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 170
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F++M +N+VSWT+M+ YT + + AI L M + G V+ + +++L AC+ SG
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG-VKLDVVAITSILHACARSGS 229
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
LD G+ +H+ I + + + N L+DMY KCGS+ S ++ ++ WN+
Sbjct: 230 LDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME----GANSVFSTMVVKDIISWNT 285
Query: 181 M-----------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEI 217
M L GK++H + ++ G+ + +L+D+Y+KCG +
Sbjct: 286 MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 345
Query: 218 DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWA 277
LF+ +P +D+VSWT +I G +
Sbjct: 346 GLARLLFDMIPSKDLVSWTVMIAG----------------------------------YG 371
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
YGN EAI + + +G+ D +F S L AC
Sbjct: 372 MHGYGN------------------EAIATFNEMRDAGIEPDEVSFISILYAC-------- 405
Query: 338 RFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP-K 384
H ++ G+ YI+ ++ ++DL +R GN+ A + LP
Sbjct: 406 -----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 460
Query: 385 KDVVAWSGLIMGC 397
D W L+ GC
Sbjct: 461 PDATIWGALLCGC 473
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R + L C ++++GK +H I++ G S D N L+ +Y L A LF
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 352
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + K++VSWT M+ Y + N AI +N M + G +EP+ + ++L ACS SG L
Sbjct: 353 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLL 411
Query: 122 DLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKL-FDQYSNWAASAYGNVALWN 179
+ G R + +E ++D+ + G+L++ F + A A +W
Sbjct: 412 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA----TIWG 467
Query: 180 SMLSGGKQVH 189
++L G + H
Sbjct: 468 ALLCGCRIYH 477
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/648 (27%), Positives = 313/648 (48%), Gaps = 34/648 (5%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
I G+S+H IIK GL++ + + L+SMY+ L+ + LF KN + W +M++
Sbjct: 358 INHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISG 417
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
Y N N A+ + M + V P+ V+ C + DL + + IH R + E
Sbjct: 418 YLVNNEWNMALDAFCKM-QIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFES 476
Query: 139 DTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV-------HAF 191
+MN LL MY CG ++ Y+ + + WN+M+SG ++ F
Sbjct: 477 YQSVMNALLAMYADCGDISTS----YTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLF 532
Query: 192 CVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
C + F +E L +LI + +D + + V I GC T
Sbjct: 533 C--QMFHEEVWFDLVTLIGLISSLSVSEDAIV-------GESVHSLAIKSGCISDVSLT- 582
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+AL+ MY+NC ++ ++LF+ + S N +N+++SGY N +E+ + L + +
Sbjct: 583 NALITMYANCGIVEAGQQLFNSFCSR------NTITYNALMSGYRKNNVSEKILPLFTQM 636
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+ + T + L C + L +H V + L+ + ++ + +Y+R
Sbjct: 637 VKNDEKPNLVTLLNLLPVCQSQLQGKC-----IHSYAVRNFTRLETPLFTSAMGMYSRFN 691
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
N++ +F + ++++ W+ + C + + F+ M+ N ++ + +++
Sbjct: 692 NIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALIS 751
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
CS L + + A +++GF + L +LID + +CG I LF E+D V+
Sbjct: 752 ACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVT 811
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMK 550
W +I +G + A+ F MI S + P++ITF+ +LSAC H GLVE+ T+F S++
Sbjct: 812 WGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQ 871
Query: 551 PEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLV 610
++G+ P +EHY CMVDLLG+ G D+A ++ MPF P + S+L AC H N K+
Sbjct: 872 ADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIG 931
Query: 611 SIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
+ + L+ + YVMLSN+YA+ G W ++R + G +K
Sbjct: 932 ESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRK 979
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/687 (21%), Positives = 282/687 (41%), Gaps = 98/687 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+R C ++ G+ +HCR+++ G ++ LL MYA ++ + ++FD M +++
Sbjct: 146 IRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDL 205
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW MV+ Y+ N A+ M + G + PN ++ C +GD G +H
Sbjct: 206 ISWNAMVSGYSVNGCFREAVETLQEMQQCG-MSPNASTLVGIVGMCGSAGDRVAGDSLHA 264
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFD------------------QYSNW-- 167
+ D L + L+ MY L +R +FD Q+SNW
Sbjct: 265 FALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKE 324
Query: 168 ---------AASAYGNVALWNSMLSG----------GKQVHAFCVKRGFEKEDVTLTSLI 208
A N+ S+L G+ VH +K G ++ +++L+
Sbjct: 325 AFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALV 384
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-----------CSCFTLSALVDMY 257
MY K G++D LF E++ + W +I G C D
Sbjct: 385 SMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDAT 444
Query: 258 SNCNVLCEARKLFDQYSSWAASAY-----------------------GNVAL-------- 286
+ NV+ R D + + + AY G+++
Sbjct: 445 TVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKM 504
Query: 287 -------WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
WN+MISG+ +E ++TL + + D T + + ++ ++
Sbjct: 505 EVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLS--VSEDAIV 562
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
VH L + SG D + + LI +YA G V++ +LF+ ++ + ++ L+ G K
Sbjct: 563 GESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRK 622
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+ ++ LF M+ +++ N + ++L VC S +GK +H++ V+ E
Sbjct: 623 NNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQ---SQLQGKCIHSYAVRNFTRLETPL 679
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
TS + MY + I+ +F + R+++ W + C Q +A + YF+ M+ +
Sbjct: 680 FTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNV 739
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+E+T L ++SAC G + A I + + G ++ ++D + G A
Sbjct: 740 RPDEVTMLALISACSQLGNADFAACIMAVIL-QKGFSMNILVLNALIDTHSRCGSISFAR 798
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNN 606
+L + + D W +M+ A H N
Sbjct: 799 ELF-DSSVEKDSVTWGAMINAYSMHGN 824
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 240/531 (45%), Gaps = 46/531 (8%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEM--ARKNIVSWTTM 75
S+K + +H R+ G QD F L+ Y F A LF E R + S +
Sbjct: 53 SLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLV 112
Query: 76 VTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREK 135
V ++ + + LY + +GS + F + V++AC+ + L LGR +H R+ R
Sbjct: 113 VRCFSDHGFHRELLDLYRGLCGFGS---DNFTFPPVIRACTAASCLQLGRQVHCRVLRTG 169
Query: 136 LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCV 193
+ + LLDMY K G + +R++FD ++ WN+M+SG + V
Sbjct: 170 HGSNVGVQTALLDMYAKAGQIDVSRRVFD------CMVLRDLISWNAMVSG------YSV 217
Query: 194 KRGFEKEDVTL------------TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
F + TL ++L+ + CG D +A D + + G
Sbjct: 218 NGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVA-------GDSLHAFALKGG 270
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
+ T SAL+ MY+ + L +R +FD ++ +NSMIS Y+ + +
Sbjct: 271 TIDDESLT-SALISMYAAFDDLSSSRLVFD------LQPVKDLVSFNSMISAYMQHSNWK 323
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA + +H +G+ + T S L +C +LL F VHG+I+ G V S
Sbjct: 324 EAFEVFRLMHCAGVGPNLITLVSVLPSCSDLL-FGINHGESVHGMIIKLGLAEQVSVVSA 382
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+ +Y++LG + S+ LF +K+ + W+ +I G + ++A F M + +
Sbjct: 383 LVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPD 442
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ +V+ C L K +HA+ V+ FE + +L+ MY CG+I LF+
Sbjct: 443 ATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQ 502
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
M R ++SW +I G + G ++ ++ F +M + + +T +G++S+
Sbjct: 503 KMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISS 553
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 5/312 (1%)
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G D++TF ++AC + QVH ++ +G+ + V + L+D+YA+ G +
Sbjct: 134 GFGSDNFTFPPVIRACTAASCL--QLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQID 191
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
+ +F + +D+++W+ ++ G + +G A ++M N + ++ +C
Sbjct: 192 VSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCG 251
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
G +HAF +K G ++ ++LI MY ++ +F P +D+VS+
Sbjct: 252 SAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNS 311
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I Q+ KEA F+ M + + PN IT + VL +C M +
Sbjct: 312 MISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKL 371
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN--NTKLVS 611
GL + +V + + G D + L K + +W SM+ +N N L +
Sbjct: 372 GLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEK-NNILWNSMISGYLVNNEWNMALDA 430
Query: 612 IIAEQLLATSPE 623
Q+ +P+
Sbjct: 431 FCKMQIAGVAPD 442
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 241/419 (57%), Gaps = 9/419 (2%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
T + L+++Y+ C AR +FD ++ WN+MI+GY + ++ +A+ L
Sbjct: 93 LTCNILINLYTKCGRNDCARLVFDIMH------VRSIVSWNTMIAGYTHSGEDVQALKLF 146
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
S +H G + +T +S + AC N Q+H + + + + VG+ ++D+YA
Sbjct: 147 SRMHREGTHMSEFTLSSTICACAAKYAINE--CKQLHTIALKLALDSNSFVGTAILDVYA 204
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ +K A +F ++P++ +V WS L G ++GL+ A LFR ++ +F +S+
Sbjct: 205 KCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSA 264
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
+L C+ LA G Q+HA +K GF SL+D+Y +CG+I+ ALF +M ++
Sbjct: 265 ILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKN 324
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
VV W +I ++ + EA+ F++M Q + PNE+T+L VLS C HAGLVE+ F+
Sbjct: 325 VVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFS 384
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+ + +EP++ HY CMVD+LG++G D+A +L+ +MPF+P ++W S+L +C +NN
Sbjct: 385 LLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNI 444
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIE 665
+L I AEQL P++ +V+LSNVYA G W+++ RK K G KK G SWIE
Sbjct: 445 RLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIE 503
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HGL + G D + + LI+LY + G A +F + + +V+W+ +I G T G +
Sbjct: 80 HGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGED 139
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A LF M +++F +SS + C+ ++ KQ+H +K + T++
Sbjct: 140 VQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAI 199
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+D+Y KC I D +F+ MPER +V+W+ + G QNG +EA+ F+ + ++ E
Sbjct: 200 LDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTE 259
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
T +LSAC L E + + + G + +VD+ + G + A L A
Sbjct: 260 FTLSAILSACASLALKIEGIQLHAVI-LKCGFHGNFFVAASLVDVYARCGQIEKAYALFA 318
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAE--QLLATSPEDPSKYVMLS 632
M K + IW +M+ + H ++ I+ E Q L P + + +LS
Sbjct: 319 YMEHK-NVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLS 368
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 53/285 (18%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D+ I + L+ C +R+S+ GKS H I +GL D T N L+++Y + A +
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++IVSW TM+ YT + A++L++ M G+ + F S+ + AC+
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGT-HMSEFTLSSTICACAAKYA 173
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK--LFDQYSNWAASAYGNVALW 178
++ + +H + L+ ++ + +LD+Y KC + +F++ + W
Sbjct: 174 INECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPE------RTLVTW 227
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
+S+ +G G Q+HA +K
Sbjct: 228 SSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILK 287
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
GF SL+D+Y +CG+I+ ALF +M ++VV W +I
Sbjct: 288 CGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMI 332
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + +I + K LH +K L + F G +L +YA + DA +F++M + +V+W
Sbjct: 168 CAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTW 227
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERI 131
+++ Y N A+ L+ G VE F SA+L AC SL+ ++ G +H I
Sbjct: 228 SSLFAGYVQNGLHEEALHLFRCAQREG-VELTEFTLSAILSACASLALKIE-GIQLHAVI 285
Query: 132 TREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG-GKQVHA 190
+ + + +L+D+Y +CG + + Y+ +A + NV +WN+M++ + H+
Sbjct: 286 LKCGFHGNFFVAASLVDVYARCGQIEK----AYALFAYMEHKNVVIWNAMIASFSRHAHS 341
Query: 191 FCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFN-FMPERDV 232
+ FEK +VT S++ + G ++ G F+ M +R V
Sbjct: 342 WEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTV 392
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 155/425 (36%), Gaps = 119/425 (28%)
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSN 166
S L+ C+ L +G+ H L DT+ N L+++Y KCG R +FD
Sbjct: 61 SQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMH- 119
Query: 167 WAASAYGNVALWNSMLSG------------------------------------------ 184
++ WN+M++G
Sbjct: 120 -----VRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG- 241
KQ+H +K + T+++D+Y KC I D +F MPER +V+W+ + G
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234
Query: 242 -----------CFECSC--------FTLSA------------------------------ 252
F C+ FTLSA
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNF 294
Query: 253 -----LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
LVD+Y+ C + +A LF A + NV +WN+MI+ + + + EA+ L
Sbjct: 295 FVAASLVDVYARCGQIEKAYALF------AYMEHKNVVIWNAMIASFSRHAHSWEAMILF 348
Query: 308 SHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
+ G+ + T+ S L C + L R + L+ E + + S ++D+
Sbjct: 349 EKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSL--LMSDRTVEPNVLHYSCMVDVL 406
Query: 367 ARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQF 423
R G A EL +++P + + W L+ C + LA + + D N
Sbjct: 407 GRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHV 466
Query: 424 IISSV 428
++S+V
Sbjct: 467 LLSNV 471
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
IS L++C+ SL GK H + G + +T LI++Y KCG D +F M
Sbjct: 60 ISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMH 119
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
R +VSW +I G +G +A+ F M + +E T + AC + E
Sbjct: 120 VRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQ 179
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ T + + L+ + ++D+ + DA + +MP + T W+S+
Sbjct: 180 LHT-IALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVT-WSSLF 231
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 285/572 (49%), Gaps = 40/572 (6%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW 167
A+L S + L + +H ++ + + VL ++L + Y++ L FD+ W
Sbjct: 9 ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68
Query: 168 AASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+ + WN++LSG + + DV L +Y + DG+ FN +
Sbjct: 69 KRNRHS----WNTILSG------YSKSKSCYYSDVLL-----LYNRMRRHCDGVDSFNLV 113
Query: 228 PERDVVSWTGII-----------VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
G++ + + +LV+MY+ + A+K+FD+
Sbjct: 114 FAIKACVGLGLLENGMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEM--- 170
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
N LW ++ GY+ ++ E L + +G+ +D+ T +KAC N+
Sbjct: 171 ---PVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNV--SA 225
Query: 337 SRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+ VHGL + + + Y+ S +ID+Y + + +A +LF +++VV W+ LI
Sbjct: 226 GKEGKCVHGLSIRRSFIDQSGYLEAS-IIDMYVKCRLLDNARKLFETSVERNVVMWTTLI 284
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G K A LFR M+ + N ++++L CS L SLR GK VH + ++ G E
Sbjct: 285 SGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+ + TS ID Y +CG I +F MP+R+V+SW+ +I G NG +EA+ F M
Sbjct: 345 MDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNM 404
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
L PN +TF+ +LSAC H+G V+E W F SM +YGL P EHY CMVDLLG+AG
Sbjct: 405 KSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGE 464
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+A+ I MP KP + W ++L AC H L IAE+LL+ P++ S YV+LSN+
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNI 524
Query: 635 YATLGMWDSLSKVR-KAGKKLGEKKAGMSWIE 665
YA GMW+ ++ VR K G K K G+S E
Sbjct: 525 YADAGMWEMVNCVRHKMGIKGYRKPMGLSATE 556
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 182/467 (38%), Gaps = 108/467 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V A++ C ++ G +H +K GL +D + +L+ MYA F ++ A K+
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKV 166
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM +N V W ++ Y + + RL+ M + G + + ++KAC
Sbjct: 167 FDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTG-LALDALTLICLVKACGNVSA 225
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
G+ +H I R ++ L +++DMYVKC L RKLF+ S NV +
Sbjct: 226 GKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLDNARKLFE------TSVERNVVM 279
Query: 178 WNSMLSG--------------------------------------------GKQVHAFCV 193
W +++SG GK VH + +
Sbjct: 280 WTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
+ G E + V TS ID Y +CG I +F+ MP+R+V+SW+ +I
Sbjct: 340 RNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMI-------------- 385
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+A+G +N EEA+ ++ S
Sbjct: 386 -------------------------NAFG-------------INGLFEEALDCFDNMKSQ 407
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ +S TF S L AC + N + Q + G + + ++DL R G +
Sbjct: 408 NLVPNSVTFVSLLSACSHSGNVKEGWK-QFESMTRDYGLVPEEEHYACMVDLLGRAGEIG 466
Query: 374 SALELFHRLPKKDVV-AWSGLIMGCTKHGLNSLAYLLFRDMINSNQD 419
A +P K + AW L+ C H LA + +++ D
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPD 513
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 204/679 (30%), Positives = 313/679 (46%), Gaps = 129/679 (18%)
Query: 53 SLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVL 112
++ +A +F +M KN SWT M+TA+ N + A RL++ M + +V N + + +
Sbjct: 56 NVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIR 115
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAAS 170
C++ +L ++ ER + Y ++M +VK G + KL+ +
Sbjct: 116 NGCNVGKAYELFSVLAER---NLVSYAAMIMG-----FVKAGKFHMAEKLYRETP----- 162
Query: 171 AYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPE 229
+E D + +LI+ YLK GE+++ L +F M E
Sbjct: 163 --------------------------YEFRDPACSNALINGYLKMGEVNEALRIFENMGE 196
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
RDVVSW SA+VD + AR LFD+ NV W++
Sbjct: 197 RDVVSW---------------SAMVDGLCRDGRVAAARDLFDRMPD------RNVVSWSA 235
Query: 290 MISGYVLNEQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI GY+ +E L + G+ ++S T T KAC N + +Q+HGL+
Sbjct: 236 MIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSE--GMQIHGLVS 293
Query: 349 TSGYELDYIVGSNLIDLYARLG-------------------------------NVKSALE 377
G+E D ++ +++I +Y+ LG V++A
Sbjct: 294 RLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYR 353
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR---------------DMINSNQ---- 418
+F R+P KDV++W+ +I G +K G A LF +N+N+
Sbjct: 354 VFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEEA 413
Query: 419 ------------DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
N ISSVL + L +L G Q+H +K E SLI
Sbjct: 414 LHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLISF 473
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y K G + D +F + E +V+S+ II G QNG EA+ +++M +PN +TF
Sbjct: 474 YSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNHVTF 533
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
L VLSAC HAGLV+E W IF +MK YG+EP +HY CMVD+LG+AG D+A LI MP
Sbjct: 534 LAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDLIRSMP 593
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
FKP +W ++L A +TH L + A+++ P++ + YV+LSN+Y+ G
Sbjct: 594 FKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMYSAAGKKIDGDL 653
Query: 647 VRKAGKKLGEKKA-GMSWI 664
V+ A G KK+ G SWI
Sbjct: 654 VKMAKNLKGIKKSPGCSWI 672
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 223/530 (42%), Gaps = 90/530 (16%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D N L++ Y +N+A ++F+ M +++VSW+ MV + R A L++ M
Sbjct: 166 RDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRM 225
Query: 96 LEY-------------------------------GSVEPNGFMYSAVLKACSLSGDLDLG 124
+ G VE N + + KAC G + G
Sbjct: 226 PDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEG 285
Query: 125 RLIHERITREKLEYDTVLMNTLLDMY--VKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
IH ++R E+D VL N+++ MY + C + K+F S+ ++ WNS++
Sbjct: 286 MQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSD------KDIVTWNSLI 339
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
SG Y+ E++ +F MP +DV+SWT +I G
Sbjct: 340 SG--------------------------YIHNNEVEAAYRVFGRMPVKDVISWTAMIAG- 372
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F+ S V+ A +LF+ + + +W ++ISG+V N + EE
Sbjct: 373 -----FSKSGRVE---------NAIELFNMLPA------KDDFVWTAIISGFVNNNEYEE 412
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ + + G + T +S L A L+ N LQ+H I+ E + + ++L
Sbjct: 413 ALHWYARMIWEGCKPNPLTISSVLAASAALVALNE--GLQIHTCILKMNLEYNLSIQNSL 470
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
I Y++ GNV A +F + + +V++++ +I G ++G A +++ M + + N
Sbjct: 471 ISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNH 530
Query: 423 FIISSVLKVCSCLASLRRGKQV-HAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+VL C+ + G + + G E E ++D+ + G +D+ + L +
Sbjct: 531 VTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDLIR 590
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
MP + G I+G + + +A + L+P T VLS
Sbjct: 591 SMPFKPHSGVWGAILGASKT-HLRLDLAKLAAQRITDLEPKNATPYVVLS 639
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
R GNVK A +FH++P K+ +W+ ++ ++G A LF +M N +IS
Sbjct: 52 GRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMIS 111
Query: 427 SVLK----------VCSCLAS-------------LRRGKQVHAFCVKR--GFEKEDITLT 461
+ ++ + S LA ++ GK A + R +E D +
Sbjct: 112 AYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACS 171
Query: 462 -SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+LI+ YLK GE+++ L +F+ M ERDVVSW+ ++ G ++GR A F M
Sbjct: 172 NALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDR--- 228
Query: 521 PNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQ 580
N +++ ++ G +E + +F MK E +E + M G G + Q
Sbjct: 229 -NVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQ 287
Query: 581 ---LIAEMPFKPDKTIWASML 598
L++ + F+ D + S++
Sbjct: 288 IHGLVSRLGFEFDNVLSNSVI 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
+G +H I+K L ++ N+L+S Y+ ++ DA+++F ++ N++S+ ++++ +
Sbjct: 447 EGLQIHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFA 506
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
N + A+ +Y M G EPN + AVL AC+ +G +D G
Sbjct: 507 QNGFGDEALGIYKKMQSEGH-EPNHVTFLAVLSACTHAGLVDEG 549
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/436 (18%), Positives = 158/436 (36%), Gaps = 117/436 (26%)
Query: 1 MDLRR--IVEA--------LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD 50
MD++R +VE + CG + +G +H + + G D N++++MY+
Sbjct: 254 MDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSM 313
Query: 51 FTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSA 110
+ A K+F ++ K+IV+W ++++ Y N A R++ M + ++A
Sbjct: 314 LGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDVIS-----WTA 368
Query: 111 VLKACSLSGDLDLG-RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAA 169
++ S SG ++ L + ++ + ++ G + +++ +W A
Sbjct: 369 MIAGFSKSGRVENAIELFNMLPAKDDFVWTAII----------SGFVNNNEYEEALHWYA 418
Query: 170 SAYGNVALWNSM--------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
N + L+ G Q+H +K E SLI Y K G
Sbjct: 419 RMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLISFYSKSG 478
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ D +F + E +V+S+ II G
Sbjct: 479 NVVDAYRIFLDVIEPNVISYNSIISG---------------------------------- 504
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+A + +G +EA+ + + S G + TF + L AC
Sbjct: 505 FAQNGFG------------------DEALGIYKKMQSEGHEPNHVTFLAVLSAC------ 540
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSN------------LIDLYARLGNVKSALELFHRLP 383
H +V G+ + + S+ ++D+ R G + A++L +P
Sbjct: 541 -------THAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDLIRSMP 593
Query: 384 KKDVVAWSGLIMGCTK 399
K G I+G +K
Sbjct: 594 FKPHSGVWGAILGASK 609
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 282/591 (47%), Gaps = 72/591 (12%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
+ +LK C DL G+ +H + + T N + +Y KCG L RK F S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 166 NWAASAYGNVALWNSMLSG-GKQVHAFCVKRGF----EKEDVTLTSLIDMYLKCGEIDDG 220
+ NV +N++++ K+ + F E + V+ +LI Y CGE
Sbjct: 71 D------PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 221 LALFNFMPER----DVVSWTGIIVGC------------------FECSCFTLSALVDMYS 258
L LF+ M E D + + +I C F+ +AL+ Y
Sbjct: 125 LGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L +A+++F + + WNSMI Y +++ +A+ L + G+ +D
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALE 377
+T S L A L + + LQ HG ++ +G+ + VGS LIDLY++ G + +
Sbjct: 240 MFTLASVLTAFTCLEDLSG--GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHG-LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + + D+V W+ ++ G +++ A FR M N V+ CS L+
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLS 357
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIV 496
S +GKQ+H+ +KR LF M E + VS +I
Sbjct: 358 SPSQGKQIHSLALKR---------------------------LFDRMAEHNTVSLNSMIA 390
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLE 556
G Q+G E++ FQ M++ ++ P ITF+ VLSAC H G VEE W F MK ++ +E
Sbjct: 391 GYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIE 450
Query: 557 PHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQ 616
P EHY CM+DLLG+AG +AE LIA MPF P WAS+L AC TH N +L A Q
Sbjct: 451 PEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQ 510
Query: 617 LLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
+L P + + YV+LSN+YA+ G W+ ++ VRK + G +KK G SWIEV
Sbjct: 511 VLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 561
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 136/595 (22%), Positives = 240/595 (40%), Gaps = 103/595 (17%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYAD----------FT 52
L+R L+ C R + GKSLH IK + + N+ + +Y+ F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 53 SLND---------------------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRL 91
++D AH+LFD++ ++VS+ T+++AY A+ L
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
++ M E G ++ +GF SAV+ AC D+ L +H + + N LL Y
Sbjct: 128 FSGMREMG-LDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAF--CVKRGFEKE 200
K G L +++F + + WNSM+ G K + F V+RG +
Sbjct: 185 KNGDLDDAKRVF-----YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TL S++ + ++ GL +I F + S L+D+YS C
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHG-----------QLIKTGFHQNSHVGSGLIDLYSKC 288
Query: 261 -NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCID 318
+ + RK+F++ + ++ LWN+M+SGY NE+ E+A+ + G +
Sbjct: 289 GGGMSDCRKVFEEITE------PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPN 342
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+F + AC NL + + Q+H L + L
Sbjct: 343 DCSFVCVISACSNLSSPSQ--GKQIHSLALK---------------------------RL 373
Query: 379 FHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
F R+ + + V+ + +I G +HG+ + LF+ M+ SVL C+ +
Sbjct: 374 FDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRV 433
Query: 439 RRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIV 496
G + K E E + +ID+ + G++ + L MP + W ++
Sbjct: 434 EEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLG 493
Query: 497 GCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC-RHAGLVEEAWTIFTSMK 550
C +G + A+ +++Q L+P+ VLS AG EE T+ M+
Sbjct: 494 ACRTHGNIELAVKAANQVLQ--LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMR 546
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 299/616 (48%), Gaps = 46/616 (7%)
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
R W T++ Y S + +YN M+ G V P+ + VLKAC+ + ++ GR
Sbjct: 4 RTTAFLWNTLIRGY-SIAGVGGGLEVYNQMVRIG-VRPDDHTFPFVLKACADAFEVRKGR 61
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
+H + + E D + NTLL Y CG L ++FD+ ++ WN+M+
Sbjct: 62 EVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPE------KDLVSWNTMIG 115
Query: 184 ----------GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
+ + G + +T++S + + L F V
Sbjct: 116 VFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPV----------LVELEFFKAGREV 165
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
+ I +G E F ++L+DMY+ EA +F + + NV WN+MI+
Sbjct: 166 HGSSIRMG-LESDIFIANSLIDMYAKSGHSTEASNVFYKLDA------KNVVSWNAMIAN 218
Query: 294 YVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYE 353
+ N A+ L+ + G +S TFT+ L AC + R ++H + G
Sbjct: 219 FAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLV--RPGKEIHARSIHMGCA 276
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D V + L D+YA+ G++K A +F +D V+++ LI+G ++ S + LF +M
Sbjct: 277 FDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEM 335
Query: 414 --INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCG 471
+ QD F+ L C+ L ++++GK++H F +++ F SL+D Y KCG
Sbjct: 336 QLMGLKQDNVSFM--GALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCG 393
Query: 472 EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
I +F M +DV SW +I+G G G AI F+ M + ++ + ++F+ VLS
Sbjct: 394 RIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLS 453
Query: 532 ACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDK 591
AC H GL+E+ F +K G+EP HY CMVDLLG+AG ++A +LI +P PD
Sbjct: 454 ACSHGGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDA 512
Query: 592 TIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAG 651
IW ++L AC + N +L + AE L PE Y +LSN+YA G WD +++R+
Sbjct: 513 NIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELM 572
Query: 652 KKLGEKKA-GMSWIEV 666
K G KK+ G SW+++
Sbjct: 573 KSRGVKKSPGCSWVQI 588
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 240/536 (44%), Gaps = 44/536 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C +++G+ +H ++K G D+F GN LLS Y + L DA ++FDEM K++
Sbjct: 48 LKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDL 107
Query: 70 VSWTTMVTAYTSNKRPNW----AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
VSW TM+ ++ N W A+ ++ M++ G ++PN S+ L GR
Sbjct: 108 VSWNTMIGVFSVN---GWHYRDALDMFRLMIDEG-LKPNSITISSFLPVLVELEFFKAGR 163
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
+H R LE D + N+L+DMY K G T Y A NV WN+M++
Sbjct: 164 EVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAK----NVVSWNAMIAN- 218
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP---------ERDVVSWT 236
F R FE V L + Y GE+ + + N +P +
Sbjct: 219 -----FAQNR-FELVAVGLVRQMQDY---GELPNSVTFTNVLPACARMGLVRPGKEIHAR 269
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
I +GC F +AL DMY+ L AR +FD ++ + +N +I G+
Sbjct: 270 SIHMGC-AFDLFVSNALTDMYAKSGHLKLARNVFD-------TSLRDEVSYNILIVGHSQ 321
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
E+++L S + G+ D+ +F AL AC NL ++HG ++ + +
Sbjct: 322 TSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQ--GKEIHGFLLRKLFHIHL 379
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
V ++L+D Y + G + A +F R+ KDV +W+ +I+G G A LF +M
Sbjct: 380 FVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKD 439
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + + +VL CS L +G++ RG E + ++D+ + G +++
Sbjct: 440 DVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEA 499
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLS 531
L K +P D W ++ C G + A + + + LKP + +LS
Sbjct: 500 AELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFE--LKPEHSGYYTLLS 553
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 12/237 (5%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +IKQGK +H +++ +F N+LL Y + A +FD M K+
Sbjct: 350 ALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKD 409
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SW TM+ Y + AI L+ +M + VE + + AVL ACS G L+ GR
Sbjct: 410 VASWNTMILGYGMLGELDTAIDLFENMRK-DDVEYDSVSFIAVLSACSHGGLLEKGRKYF 468
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS----- 183
+ + +E + ++D+ + G L + + N+ W ++L
Sbjct: 469 DELKARGIEPTQMHYACMVDLLGRAG-LMEEAAELIKGLPIVPDANI--WGALLGACRIY 525
Query: 184 GGKQVHAFCVKRGFE---KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
G ++ A+ + FE + T L +MY + G D+ + M R V G
Sbjct: 526 GNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPG 582
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/613 (28%), Positives = 309/613 (50%), Gaps = 26/613 (4%)
Query: 50 DFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM-LEYGSVEPNGFMY 108
D L A ++FD+M R++I SWT ++ Y + +P A+ L++ M ++ V + ++
Sbjct: 40 DSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVL 99
Query: 109 SAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWA 168
S LKAC S ++ G +H + L + + LLDMY++ G + + +A
Sbjct: 100 SVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSC----RVFA 155
Query: 169 ASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMY--LKCGEIDDGLALFNF 226
+ N W + ++G VHA G E + S + + L +AL
Sbjct: 156 EMPFRNSVTWTAFITG--LVHA-----GLHYEGLRYFSQMSRFKQLSSDTFAFAIALKAC 208
Query: 227 MPERDVVS----WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
R V T +IV F + ++L MY+ C + + +LF+ S
Sbjct: 209 ADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSE------R 262
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
+V LW S+I+ Y+ Q E+A+ + +S + + TF S AC +L + Q
Sbjct: 263 DVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLV--WGEQ 320
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGL 402
+HG + + G V ++++ +Y+ + SA LF + +D+++WS +I G ++
Sbjct: 321 LHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAF 380
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
+ F M + F ++S+L V +A L +G+QVHA + G E+ ++
Sbjct: 381 GEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSA 440
Query: 463 LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
LI+MY KCG I + +F+ D+VS T +I G ++G+ +EAI F++ ++ +P+
Sbjct: 441 LINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPD 500
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
++TF+ VL+AC H+G ++ + F M+ Y + P EHY CMVDLL +AG +DAE++I
Sbjct: 501 DVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMI 560
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
EMP+K D +W ++L+AC+ + + A+++L P + V L+N++++ G W
Sbjct: 561 NEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWK 620
Query: 643 SLSKVRKAGKKLG 655
+ VRK K G
Sbjct: 621 EAANVRKDMKSKG 633
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 190/509 (37%), Gaps = 143/509 (28%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ CGQ +I G+SLH K L +F G+ LL MY ++ + ++F EM +N
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
V+WT +T +R ++ M + + + F ++ LKAC+ + GR IH
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + + N+L MY +CG + +LF+ S +V LW S+++
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSE------RDVVLWTSLITAYI 275
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+Q+H G
Sbjct: 276 RIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLS 335
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----CFECSCFTL-------- 250
S++ MY C ++D LF M RD++SW+ II G F CF
Sbjct: 336 VSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAG 395
Query: 251 -------------------------------------------SALVDMYSNCNVLCEAR 267
SAL++MYS C + EA
Sbjct: 396 PQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEAS 455
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
K+F++ ++ +MI+GY + + EEAI L D TF S L
Sbjct: 456 KVFEEKDR------TDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLT 509
Query: 328 AC------------INLL--NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
AC NL+ N+N R A + +G +V DL R G +
Sbjct: 510 ACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMV---------------DLLCRAGRLN 554
Query: 374 SALELFHRLP-KKDVVAWSGLIMGCTKHG 401
A ++ + +P KKD V W+ L+ C + G
Sbjct: 555 DAEKMINEMPWKKDDVVWTTLLRACKEKG 583
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 438 LRRGKQVHAFC---VKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGI 494
+R G ++ FC +++ + S + + G++ +F MP RD+ SWT I
Sbjct: 6 VRNGGRIRRFCTASIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAI 65
Query: 495 IVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL--GVLSACRHAGLVEEAWTIFTSMKPE 552
+ G + +EA+ F M L + T++ L AC + + ++ +
Sbjct: 66 MKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKT 125
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+ L ++D+ + G D + ++ AEMPF+ T W + +
Sbjct: 126 FLLSSVFVG-SALLDMYMRIGKIDKSCRVFAEMPFRNSVT-WTAFI 169
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 234/427 (54%), Gaps = 10/427 (2%)
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
F S F ++L+ +Y C + +AR++FD + ++ W S+I+GY N+ +E
Sbjct: 95 FAGSVFLDNSLIHLYCKCGAVADARRVFDGMPA------RDMCSWTSLIAGYAQNDMPDE 148
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ LL + + +TF S LKA + +S Q+H L V + D VGS L
Sbjct: 149 ALGLLPGMLRGRFKPNGFTFASLLKAA--GASASSGIGEQIHALTVKYDWHDDVYVGSAL 206
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+D+YAR G + A+ +F +L K+ V+W+ LI G + G L+F +M + +
Sbjct: 207 LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
F SSV + + +L +GK VHA +K G +++DMY K G + D +F
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR 326
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ ++DVV+W ++ Q G +EA+ +F+EM + + N+ITFL +L+AC H GLV+E
Sbjct: 327 VDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEG 386
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
F MK EY LEP ++HY +VDLLG+AG +DA I +MP KP +W ++L +C
Sbjct: 387 KQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCR 445
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N K+ A+ + P+D V+L N+YA+ G WD+ ++VRK K G KK
Sbjct: 446 MHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPAC 505
Query: 662 SWIEVSS 668
SW+E+ +
Sbjct: 506 SWVEIEN 512
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 64/413 (15%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + RS+ +++H + + +F N+L+ +Y ++ DA ++FD M +++ SW
Sbjct: 74 CARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSW 133
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
T+++ Y N P+ A+ L ML G +PNGF ++++LKA S +G IH
Sbjct: 134 TSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 133 REKLEYDTVLMNTLLDMYVKCGSLTRKL--FDQYSNWAASAYGNVALWNSMLSGGKQ--- 187
+ D + + LLDMY +CG + + FDQ + N WN++++G +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES------KNGVSWNALIAGFARKGD 246
Query: 188 ------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+ A + GFE T +S+ G ++ G + M I
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM-----------IKS 295
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
S F + ++DMY+ + +ARK+FD+ +V WNSM++ +
Sbjct: 296 GERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK------KDVVTWNSMLTAFAQYGLGR 349
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--------- 352
EA+T + G+ ++ TF S L AC HG +V G
Sbjct: 350 EAVTHFEEMRKCGVHLNQITFLSILTAC-------------SHGGLVKEGKQYFDMMKEY 396
Query: 353 ----ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA-WSGLIMGCTKH 400
E+D+ V ++DL R G + AL ++P K A W L+ C H
Sbjct: 397 NLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 6/280 (2%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
+ S + AC + + A+ H + S + + ++LI LY + G V A +F
Sbjct: 67 YHSLITACARYRSLDDARAIHAH--LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+P +D+ +W+ LI G ++ + A L M+ N F +S+LK AS G
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+HA VK + + ++L+DMY +CG +D +A+F + ++ VSW +I G +
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLE 560
G + + F EM ++ + T+ V SA G +E+ W +K L +
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ ++D+ ++G DA ++ + K D W SML A
Sbjct: 305 N--TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA 341
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ G S G+ +H +KY D++ G+ LL MYA ++ A +FD++ KN
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW ++ + + ++ M G E F YS+V A + G L+ G+ +H
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS---- 183
+ + + NT+LDMY K GS+ RK+FD+ +V WNSML+
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK------KDVVTWNSMLTAFAQ 344
Query: 184 ---GGKQVHAFCVKR--GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE 229
G + V F R G +T S++ G + +G F+ M E
Sbjct: 345 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 249/475 (52%), Gaps = 35/475 (7%)
Query: 218 DDGLALFNFMPER----DVVSWTGIIVGC--------------------FECSCFTLSAL 253
D+ L LF M E+ D +++ ++ C F+ + F + L
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTL 162
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+ MY+NC + AR +FD + + WNSM+SGY N +E + L I
Sbjct: 163 IQMYANCGQIGVARHVFDGMPERS------IVAWNSMLSGYTKNGLWDEVVKLFRKILEL 216
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ D T S L AC L N + IV+ G + + ++LID+YA+ G V
Sbjct: 217 RIEFDDVTMISVLMACGRLANLE--IGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVD 274
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
+A +LF + K+DVVAWS +I G + A LF +M N N+ + SVL C+
Sbjct: 275 TARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCA 334
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
L + GK VH F +K+ K +TL T LID Y KCG ID + +FK M ++V +WT
Sbjct: 335 MLGAYETGKWVH-FYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWT 393
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G NG K A+ +F M+++ +KPN++TF+GVLSAC HA LV++ +F SM+ +
Sbjct: 394 ALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRD 453
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+ +EP +EHY CMVD+LG+AG ++A Q I MPF P+ +W ++L +C H N ++
Sbjct: 454 FDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEK 513
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
E + P Y++LSN YA +G + +VR K+ KK G S IE+
Sbjct: 514 SLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIEL 568
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 174/345 (50%), Gaps = 12/345 (3%)
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
A +F+ +SAY N MI G + A+ L +H + D +TF+S
Sbjct: 74 ALSIFNHIDKPESSAY------NVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSV 127
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
LKAC + R QVH LI+ SG++ + V + LI +YA G + A +F +P++
Sbjct: 128 LKACSRMKAL--REGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER 185
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
+VAW+ ++ G TK+GL LFR ++ + + + SVL C LA+L G+ +
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIG 245
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ V +G + + TSLIDMY KCG++D LF M +RDVV+W+ +I G Q R K
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCK 305
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA-WTIFTSMKPEYGLEPHLEHYYC 564
EA+ F EM + + PNE+T + VL +C G E W F K + L L
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ-- 363
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
++D + G D + ++ EM FK T W ++++ + K+
Sbjct: 364 LIDFYAKCGYIDRSVEVFKEMSFKNVFT-WTALIQGLANNGEGKM 407
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 43/273 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + +++++G+ +H I+K G + F N L+ MYA+ + A +FD M ++I
Sbjct: 128 LKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSI 187
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W +M++ YT N + ++L+ +LE +E + +VL AC +L++G LI E
Sbjct: 188 VAWNSMLSGYTKNGLWDEVVKLFRKILEL-RIEFDDVTMISVLMACGRLANLEIGELIGE 246
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN-----WAA--SAYGN------ 174
I + L + L +L+DMY KCG + RKLFD+ W+A S Y
Sbjct: 247 YIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKE 306
Query: 175 -VALWNSMLSG------------------------GKQVHAFCVKRGFEKEDVTL-TSLI 208
+ L++ M G GK VH F +K+ K VTL T LI
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVH-FYIKKKKMKLTVTLGTQLI 365
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
D Y KCG ID + +F M ++V +WT +I G
Sbjct: 366 DFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQG 398
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 189/501 (37%), Gaps = 133/501 (26%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF--TSLNDAHKLFDEMARK 67
L+ C + ++Q +H ++K D +L A +++ A +F+ + +
Sbjct: 28 LQQCKTPKDLQQ---VHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKP 84
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++ M+ + P+ A+ L+ M E SV+ + F +S+VLKACS L G +
Sbjct: 85 ESSAYNVMIRGLAFKRSPDNALLLFKKMHE-KSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H I + + + + NTL+ MY CG + R +FD + + WNSMLSG
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERS------IVAWNSMLSGY 197
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
G+ + + V +G + +
Sbjct: 198 TKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNN 257
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG------CFEC---------- 245
TSLIDMY KCG++D LF+ M +RDVV+W+ +I G C E
Sbjct: 258 TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKG 317
Query: 246 --------------SCFTLSA-------------------------LVDMYSNCNVLCEA 266
SC L A L+D Y+ C + +
Sbjct: 318 NVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRS 377
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
++F + S + NV W ++I G N + + A+ S + + + + TF L
Sbjct: 378 VEVFKEMS------FKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVL 431
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFH 380
AC S L G + + D+ + ++D+ R G ++ A +
Sbjct: 432 SAC-------SHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFID 484
Query: 381 RLP-KKDVVAWSGLIMGCTKH 400
+P + V W L+ C H
Sbjct: 485 NMPFPPNAVVWRTLLASCRAH 505
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 50/377 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ L CG+ +++ G+ + I+ GL ++ +L+ MYA ++ A KLFDEM
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD 284
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++V+W+ M++ Y R A+ L+ H ++ G+V PN +VL +C++ G + G+
Sbjct: 285 KRDVVAWSAMISGYAQADRCKEALNLF-HEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK 343
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
+H I ++K++ L L+D Y KCG + R ++F + S + NV W +++
Sbjct: 344 WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS------FKNVFTWTALIQ 397
Query: 184 G------GKQVHAF---CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G GK F ++ + DVT ++ +D G LFN M +
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS-- 292
GC +VD+ L EA + D N +W ++++
Sbjct: 458 PRIEHYGC----------MVDILGRAGFLEEAYQFIDNMPFPP-----NAVVWRTLLASC 502
Query: 293 ----GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
+ E++ E IT L HS + S T+ L A++V LI
Sbjct: 503 RAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA---------LVGRVEDAIRVRSLIK 553
Query: 349 TSGYELDYIVGSNLIDL 365
E+ I G +LI+L
Sbjct: 554 EK--EIKKIPGCSLIEL 568
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 245/460 (53%), Gaps = 42/460 (9%)
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G +CS + L+ L+ M + +V + L + Y N LW +MI GY L
Sbjct: 69 GLSQCS-YVLTKLIRMLTKVDVPMGSYPLL----VFGQVNYPNPFLWTAMIRGYALQGLL 123
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHG-LIVTSGYELDYIVG 359
E+ + + G+ S+TF++ KAC LN + QVH I+ G+ D VG
Sbjct: 124 SESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMD--LGKQVHAQTILIGGFASDLYVG 181
Query: 360 SNLIDLY-------------------------------ARLGNVKSALELFHRLPKKDVV 388
+++IDLY A+ G+++SA LF LP KD+V
Sbjct: 182 NSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMV 241
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFC 448
AW+ ++ G ++G A F+ M + + ++ ++ V+ C+ L +++ +
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIA 301
Query: 449 VKRGFEKED--ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
+ GF + ++LIDMY KCG D+ +F+ M ER+V S++ +I+G +GRA
Sbjct: 302 ERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHS 361
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M+++ ++PN++TF+G+LSAC HAGLVE+ +F M+ +G+ P +HY CMV
Sbjct: 362 ALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMV 421
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLLG+AGC ++A L+ MP +P+ +W ++L AC H N + I A +L P
Sbjct: 422 DLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIG 481
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
Y++LSN+YA+ G W+ +SK+RK ++ G KK G SW E
Sbjct: 482 NYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 217/529 (41%), Gaps = 101/529 (19%)
Query: 5 RIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL--FD 62
R++ L C IKQ +H II+ GLSQ + L+ M ++ L F
Sbjct: 44 RLMSILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFG 100
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++ N WT M+ Y + + Y M G V P F +SA+ KAC + ++D
Sbjct: 101 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG-VGPVSFTFSALFKACGAALNMD 159
Query: 123 LGRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + I D + N+++D+YVKCG L RK+FD+ S
Sbjct: 160 LGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-------------- 205
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
E++ V+ T LI Y K G+++ LF+ +P +D+V+WT ++
Sbjct: 206 ------------------ERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMV 247
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
G Y N +
Sbjct: 248 TG----------------------------------------------------YAQNGR 255
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY--ELDYI 357
+EA+ + GM D T + AC L + A + + SG+ + +
Sbjct: 256 PKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV--KHANWIRDIAERSGFGPSGNVV 313
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
VGS LID+Y++ G+ A ++F + +++V ++S +I+G HG A LF DM+ +
Sbjct: 314 VGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE 373
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDG 476
N+ +L CS + +G+Q+ A K G ++D+ + G +++
Sbjct: 374 IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEA 433
Query: 477 LALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
L L K MP E + W ++ C +G A E+ +L+PN I
Sbjct: 434 LDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF--KLEPNGI 480
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG---LALFKFM 483
S+L C+ + + KQVHA ++ G + LT LI M K ++ G L +F +
Sbjct: 47 SILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQV 102
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHA-----GL 538
+ WT +I G G E+ ++ M + + P TF + AC A G
Sbjct: 103 NYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGK 162
Query: 539 VEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
A TI G L M+DL + G A ++ EM + D W ++
Sbjct: 163 QVHAQTILIG-----GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER-DVVSWTELI 216
Query: 599 KACETHNNTKLVSIIAEQL 617
A + + + S + + L
Sbjct: 217 VAYAKYGDMESASGLFDDL 235
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 233/414 (56%), Gaps = 10/414 (2%)
Query: 253 LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS 312
L+++YS + + ++FD+ +++ W+S+IS + NE A+ + +
Sbjct: 66 LINLYSKTQLPLFSLQVFDETPKKSSTT------WSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 313 SGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
G+ D + + SA KAC L S VH L V +GY D VGS+L+D+YA+ G +
Sbjct: 120 DGVRPDDHIYPSATKACGFLRR--SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEI 177
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A LF +P+++VV+WSG+I G + A LF+ + + DVN F SSV++VC
Sbjct: 178 GDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVC 237
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
S L GK +H C+K F+ ++LI +Y KCG I+ +F +P R++ W
Sbjct: 238 SSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWN 297
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+++ C Q+ + F+EM +KPN I FL VL AC HAGLVE+ F+ M+ +
Sbjct: 298 SMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMR-D 356
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
YG+EP EHY +VDLLG+AG +A +I +MP +P +++W ++L C H +T++ +
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIE 665
+A+++L +V+LSN YA G ++ +++RK + G KK G+SW+E
Sbjct: 417 VADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 327 KACINLLNFNS----RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
+ C LL+F R LQ+H I+ G + +V NLI+LY++ +L++F
Sbjct: 27 QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDET 86
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
PKK WS +I ++ LA FR M+N + I S K C L GK
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
VH VK G+ + +SL+DMY KCGEI D LF MPER+VVSW+G+I G Q
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF-TSMKPEYGLEPHLEH 561
EA+ F++ + + N+ TF V+ C + +E I +K + +
Sbjct: 207 DGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATS 621
++ L + G + A Q+ E+P + + +W SML AC H +T+ V + E+ +
Sbjct: 267 --ALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQRVFGLFEE-MGNV 322
Query: 622 PEDPSKYVMLSNVYA 636
P+ LS +YA
Sbjct: 323 GMKPNFIXFLSVLYA 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 181/447 (40%), Gaps = 98/447 (21%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
+ R+I L + RS++QG LH I+K+GL +NL+++Y+ + ++F
Sbjct: 24 NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
DE +K+ +W+++++A+ N+ P A++ + ML G V P+ +Y + KAC
Sbjct: 84 DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG-VRPDDHIYPSATKACGFLRRS 142
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGN 174
D+G+ +H + D + ++L+DMY KCG + R LFD+ +W+ YG
Sbjct: 143 DVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY 202
Query: 175 VAL---------------------------------WNSMLSGGKQVHAFCVKRGFEKED 201
L ++ L GK +H C+K F+
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
++LI +Y KCG I+ +F+ +P R++ W +++ C +
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ----------------- 305
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
+ + L + + GM +
Sbjct: 306 -----------------------------------HAHTQRVFGLFEEMGNVGMKPNFIX 330
Query: 322 FTSALKACINL-LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
F S L AC + L R + L+ G E + ++L+DL R G ++ A+ +
Sbjct: 331 FLSVLYACSHAGLVEKGR---EYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387
Query: 381 RLPKKDVVA-WSGLIMGCTKHGLNSLA 406
++P + + W L+ GC H +A
Sbjct: 388 QMPMRPTESVWGALLTGCRIHKDTEMA 414
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 59/307 (19%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
A + CG R GKS+HC +K G D+F G++L+ MYA + DA LFDEM +N
Sbjct: 132 ATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERN 191
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSW+ M+ Y A+ L+ L V+ N F +S+V++ CS S L+LG+LIH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQAL-IEDVDVNDFTFSSVIRVCSSSTFLELGKLIH 250
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+ + + + + L+ +Y KCG + ++FD+ N+ LWNSML
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR------NLGLWNSMLIACA 304
Query: 187 Q---------------------------------VHAFCVKR-----------GFEKEDV 202
Q HA V++ G E E
Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETE 364
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVS-WTGIIVGC-----FECSCFTLSALVDM 256
SL+D+ + G++ + +++ MP R S W ++ GC E + F +++M
Sbjct: 365 HYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEM 424
Query: 257 YSNCNVL 263
S+ + L
Sbjct: 425 DSSSSGL 431
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 233/424 (54%), Gaps = 12/424 (2%)
Query: 249 TLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLS 308
T +L+ Y+ C ++ ARK+FD+ + + WNSMI+GY EA+ +
Sbjct: 159 TAHSLITAYARCGLVASARKVFDEIP------HRDSVSWNSMIAGYAKAGCAREAVEVFR 212
Query: 309 HI-HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ G D + S L AC L + V G +V G L+ +GS LI +YA
Sbjct: 213 EMGRRDGFEPDEMSLVSLLGACGELGDL--ELGRWVEGFVVERGMTLNSYIGSALISMYA 270
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+ G ++SA +F + +DV+ W+ +I G ++G+ A LLF M N+ +++
Sbjct: 271 KCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTA 330
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL C+ + +L GKQ+ + +RGF+ + T+LIDMY K G +D+ +FK MP+++
Sbjct: 331 VLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKN 390
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQS--RLKPNEITFLGVLSACRHAGLVEEAWTI 545
SW +I +G+AKEA++ FQ M +PN+ITF+G+LSAC HAGLV+E + +
Sbjct: 391 EASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRL 450
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F M +GL P +EHY CMVDLL +AG +A LI +MP KPDK ++L AC +
Sbjct: 451 FDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKK 510
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWI 664
N + + +L P + Y++ S +YA L MW+ +++R ++ G K G SWI
Sbjct: 511 NVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWI 570
Query: 665 EVSS 668
EV +
Sbjct: 571 EVEN 574
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 14/336 (4%)
Query: 279 SAYGNVALWNSMISGYVLNEQNEE-AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNS 337
+ + N +N MI N A++L + S + D++TF +C NL + +
Sbjct: 81 APHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSH 140
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
A H L+ D +LI YAR G V SA ++F +P +D V+W+ +I G
Sbjct: 141 --ACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGY 198
Query: 398 TKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
K G A +FR+M + + ++ + S+L C L L G+ V F V+RG
Sbjct: 199 AKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLN 258
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++LI MY KCGE++ +F M RDV++W +I G QNG A EAI F M +
Sbjct: 259 SYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKE 318
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH----YYCMVDLLGQA 572
+ N+IT VLSAC G ++ I EY + +H ++D+ ++
Sbjct: 319 DCVTANKITLTAVLSACATIGALDLGKQI-----DEYASQRGFQHDIFVATALIDMYAKS 373
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK 608
G D+A+++ +MP K + + W +M+ A H K
Sbjct: 374 GSLDNAQRVFKDMPQKNEAS-WNAMISALAAHGKAK 408
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 173/446 (38%), Gaps = 132/446 (29%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C S+ + H + K L D T ++L++ YA + A K+FDE+ ++ VSW
Sbjct: 132 CANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSW 191
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
+M+ Y A+ ++ M EP+ ++L AC GDL+LGR + +
Sbjct: 192 NSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVV 251
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ ++ + + L+ MY KCG L R++FD A +V WN+++SG
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFD------GMAARDVITWNAVISGYAQNGM 305
Query: 185 --------------------------------------GKQVHAFCVKRGFEKEDVTLTS 206
GKQ+ + +RGF+ + T+
Sbjct: 306 ADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATA 365
Query: 207 LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEA 266
LIDMY K G +D+ +F MP+++ SW +I SAL
Sbjct: 366 LIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMI-----------SAL------------- 401
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI--HSSGMCIDSYTFTS 324
+A+G + +EA++L H+ G + TF
Sbjct: 402 ------------AAHG----------------KAKEALSLFQHMSDEGGGARPNDITFVG 433
Query: 325 ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG------------SNLIDLYARLGNV 372
L AC VH +V GY L ++ S ++DL AR G++
Sbjct: 434 LLSAC-------------VHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHL 480
Query: 373 KSALELFHRLPKK-DVVAWSGLIMGC 397
A +L ++P+K D V L+ C
Sbjct: 481 YEAWDLIRKMPEKPDKVTLGALLGAC 506
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 20/239 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V L CG+ ++ G+ + +++ G++ + + G+ L+SMYA L A ++F
Sbjct: 223 DEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIF 282
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D MA +++++W +++ Y N + AI L++ M E V N +AVL AC+ G L
Sbjct: 283 DGMAARDVITWNAVISGYAQNGMADEAILLFHGMKE-DCVTANKITLTAVLSACATIGAL 341
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
DLG+ I E ++ ++D + L+DMY K GSL +++F N A WN
Sbjct: 342 DLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQ------KNEASWN 395
Query: 180 SMLSG----GKQVHAFCVKR-------GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+M+S GK A + + G D+T L+ + G +D+G LF+ M
Sbjct: 396 AMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMM 454
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 2/169 (1%)
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLN-SLAYLLFRDMINSNQDVNQFIISSVLKVC 432
S+L H P + A++ +I T N LA LF M++ + + F C
Sbjct: 73 SSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSC 132
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ LASL H+ K + T SLI Y +CG + +F +P RD VSW
Sbjct: 133 ANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWN 192
Query: 493 GIIVGCGQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVE 540
+I G + G A+EA+ F+EM + +P+E++ + +L AC G +E
Sbjct: 193 SMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLE 241
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 275/552 (49%), Gaps = 37/552 (6%)
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG 184
IH + R L+ DT L+N +L G+ + ++ DQ + N+ L+N+M+ G
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQ------TKEPNIFLFNTMIRG 82
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
+++ K G + T ++ + + + G+ + + +
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV-------- 134
Query: 236 TGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
+ GC E F +L+++Y+ C + A K+FD N A W + ISGYV
Sbjct: 135 --VKAGC-EADAFVKISLINLYTKCGFIDNAFKVFDDIPD------KNFASWTATISGYV 185
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
+ EAI + + G+ DS++ L AC + S + I +G +
Sbjct: 186 GVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRS--GEWIDEYITENGMVRN 243
Query: 356 YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMIN 415
V + L+D Y + GN++ A +F + +K++V+WS +I G +GL A LF M+N
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
+ + + VL C+ L +L G F + T+LIDMY KCG +D
Sbjct: 304 EGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDR 363
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F+ M ++D V W I G +G K+A+ F +M +S +KP+ TF+G+L AC H
Sbjct: 364 AWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTH 423
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AGLVEE F SM+ + L P +EHY CMVDLLG+AGC D+A QLI MP + + +W
Sbjct: 424 AGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWG 483
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
++L C H +T+LV ++ ++L+A P YV+LSN+YA W+ +K+R + G
Sbjct: 484 ALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERG 543
Query: 656 EKK-AGMSWIEV 666
KK G SWIEV
Sbjct: 544 VKKIPGYSWIEV 555
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 201/493 (40%), Gaps = 106/493 (21%)
Query: 19 IKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA 78
+K K +H +++ GL +D + N +L +F + N + ++ D+ NI + TM+
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 79 YTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY 138
N +I +Y+ M + G + P+ F + VLKAC+ D +LG +H + + E
Sbjct: 83 LVLNDCFQESIEIYHSMRKEG-LSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141
Query: 139 DTVLMNTLLDMYVKCGSLTR--KLFD-----QYSNWAASAYGNVALWNSM---------- 181
D + +L+++Y KCG + K+FD +++W A+ G V +
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201
Query: 182 -----------------------LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEID 218
L G+ + + + G + T+L+D Y KCG ++
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261
Query: 219 DGLALFNFMPERDVVSWTGIIVG-------------------------CFE-----CSCF 248
++F+ M E+++VSW+ +I G C+ CSC
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321
Query: 249 TL-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
L +AL+DMY+ C + A ++F +
Sbjct: 322 RLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRK------KD 375
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL-LNFNSRFALQ 342
+WN+ ISG ++ ++A+ L + SG+ D TF L AC + L R
Sbjct: 376 RVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFN 435
Query: 343 VHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
+ T E+++ ++DL R G + A +L +P + + + W L+ GC H
Sbjct: 436 SMECVFTLTPEIEHY--GCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHR 493
Query: 402 LNSLAYLLFRDMI 414
L ++ + +I
Sbjct: 494 DTQLVEVVLKKLI 506
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 174/421 (41%), Gaps = 72/421 (17%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+VE L C + ++ G+ + I + G+ +++F L+ Y ++ A +FD M
Sbjct: 212 LVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGML 271
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KNIVSW++M+ Y SN P A+ L+ ML G ++P+ + VL +C+ G L+LG
Sbjct: 272 EKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-LKPDCYAMVGVLCSCARLGALELGD 330
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
I + ++VL L+DMY KCG + R + + + +WN+ +SG
Sbjct: 331 WASNLINGNEFLDNSVLGTALIDMYAKCGRMDR----AWEVFRGMRKKDRVVWNAAISGL 386
Query: 185 ---GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G A + K G + + T L+ G +++G FN M
Sbjct: 387 AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSM--------- 437
Query: 237 GIIVGCFECSCFTLSA-------LVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
EC FTL+ +VD+ L EA +L A N +W +
Sbjct: 438 -------EC-VFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEA-----NAIVWGA 484
Query: 290 MISGYVLNEQNEEAITLLSHI------HSSGMCIDSYTFTSALK----ACINLLNFNSRF 339
++ G L+ + +L + HS + S + ++ K A I R
Sbjct: 485 LLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKI-------RS 537
Query: 340 ALQVHGLIVTSGY---ELDYIVGSNLI---------DLYARLGNVKSALELFHRLPKKDV 387
+ G+ GY E+D +V L+ +YA+LG + L+ +P D
Sbjct: 538 IMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDH 597
Query: 388 V 388
V
Sbjct: 598 V 598
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
SCL L K +HA ++ G +++ L ++ G + + E ++ +
Sbjct: 21 SCLKHL---KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFN 77
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+I G N +E+I + M + L P+ TF VL AC L E S+ +
Sbjct: 78 TMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV-LDSELGVKMHSLVVK 136
Query: 553 YGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
G E +++L + G D+A ++ ++P K
Sbjct: 137 AGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK 172
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 185/694 (26%), Positives = 325/694 (46%), Gaps = 86/694 (12%)
Query: 40 TGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP-NWAIRLYNHMLEY 98
NL+S Y F A +F +N + W + V + S+ + + ++ +
Sbjct: 609 AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G V + +YS LK C+ D+ LG IH + + + D L L++ Y +C L +
Sbjct: 669 GVVF-DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727
Query: 159 --KLFDQYSN-----WAASAYGN---------VALWNSM--------------------- 181
++F + N W + N V L+ M
Sbjct: 728 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787
Query: 182 ---LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGI 238
L+ KQ+H + + G + + LI MY K G+++ +F+ M R+ SW
Sbjct: 788 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW--- 844
Query: 239 IVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNE 298
++++ Y+ L +A LF Y ++ ++ WN ++SG+ L+
Sbjct: 845 ------------NSMISSYAALGFLNDAWSLF--YELESSDMKPDIVTWNCLLSGHFLHG 890
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
EE + +L + G +S + TS L+A L N + HG ++ +G++ D V
Sbjct: 891 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN--MGKETHGYVLRNGFDCDVYV 948
Query: 359 GSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFR------- 411
G++LID+Y + ++ SA +F + +++ AW+ L+ G + G+ A L
Sbjct: 949 GTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 1008
Query: 412 --DMINSNQDV---------------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
D++ N + N I+ +L+ C+ L+ L++GK++H ++ GF
Sbjct: 1009 KPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFI 1068
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
++ T+LIDMY K + + +F+ + + + SW +I+G G KEAI+ F EM
Sbjct: 1069 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEM 1128
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ + P+ ITF +LSAC+++GL+ E W F SM +Y + P LEHY CMVDLLG+AG
Sbjct: 1129 QKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGY 1188
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
D+A LI MP KPD TIW ++L +C H N A+ L P + + Y+++ N+
Sbjct: 1189 LDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNL 1248
Query: 635 YATLGMWDSLSKVRKAGKKLGEKKAGM-SWIEVS 667
Y+ W+ + +R+ G + + SWI+++
Sbjct: 1249 YSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN 1282
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 193/467 (41%), Gaps = 98/467 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L+ CG+ ++ K +H + ++GL D+ N L+SMY+ L A ++FD M
Sbjct: 778 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 837
Query: 66 RKNIVSWTTMVTAY-----------------TSNKRPN---WAIRLYNHML--------- 96
+N SW +M+++Y +S+ +P+ W L H L
Sbjct: 838 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 897
Query: 97 -----EYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ +PN ++VL+A S G L++G+ H + R + D + +L+DMYV
Sbjct: 898 ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 957
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKE 200
K SL + +FD N N+ WNS++SG F K G + +
Sbjct: 958 KNHSLXSAQAVFDNMKN------RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 1011
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS-------------- 246
VT +I Y G A FMP + S T ++ C S
Sbjct: 1012 LVTWNGMISGYAMW-----GCARKAFMP--NSASITCLLRACASLSLLQKGKEIHCLSIR 1064
Query: 247 ------CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F +AL+DMYS + L A K+F + + +A WN MI G+ +
Sbjct: 1065 NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN------KTLASWNCMIMGFAIFGLG 1118
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+EAI++ + + G+ D+ TFT+ L AC N L G DY +
Sbjct: 1119 KEAISVFNEMQKVGVGPDAITFTALLSACKN-------SGLIGEGWKYFDSMITDYRIVP 1171
Query: 361 NL------IDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
L +DL R G + A +L H +P K D W L+ C H
Sbjct: 1172 RLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/557 (21%), Positives = 228/557 (40%), Gaps = 88/557 (15%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL+ C + I G +H +IK G D++ L++ Y L A+++F EM
Sbjct: 680 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE 739
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W + +++ + L+ M ++ ++ VL+AC G L+ + IH
Sbjct: 740 ALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGALNAAKQIH 798
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYG------------- 173
+ R L+ D L N L+ MY K G L R++FD N S++
Sbjct: 799 GYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 858
Query: 174 ----------------NVALWNSMLSGGKQVHAF------CVKR----GFEKEDVTLTSL 207
++ WN +LS G +H + ++R GF+ ++TS+
Sbjct: 859 DAWSLFYELESSDMKPDIVTWNCLLS-GHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSV 917
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ + G ++ G + ++ F+C + ++L+DMY + L A+
Sbjct: 918 LQAISELGFLNMGKETHGY-----------VLRNGFDCDVYVGTSLIDMYVKNHSLXSAQ 966
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID--------- 318
+FD + N+ WNS++SGY E+A+ LL+ + G+ D
Sbjct: 967 AVFDNMKN------RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020
Query: 319 ---------------SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
S + T L+AC +L ++H L + +G+ D V + LI
Sbjct: 1021 GYAMWGCARKAFMPNSASITCLLRACASLSLLQK--GKEIHCLSIRNGFIEDVFVATALI 1078
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
D+Y++ ++K+A ++F R+ K + +W+ +IMG GL A +F +M +
Sbjct: 1079 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 1138
Query: 424 IISSVLKVCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+++L C + G K + ++D+ + G +D+ L
Sbjct: 1139 TFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHT 1198
Query: 483 MP-ERDVVSWTGIIVGC 498
MP + D W ++ C
Sbjct: 1199 MPLKPDATIWGALLGSC 1215
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
Query: 323 TSALKACINLLNFNSRFALQVHGLIVTSGYELDY-IVGSNLIDLYARLGNVKSALELFHR 381
T A+ A +++ FN+ + +++ + + NLI Y G+ SA +F+
Sbjct: 573 TGAISAGVDVFRFNTTCGMLGALVMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYV 632
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLL--FRDMINSNQDVNQFIISSVLKVCSCLASLR 439
++ + W+ + K SL +L F+++ + + S LK C+ + +
Sbjct: 633 GLPRNYLKWNSFVEEF-KSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIW 691
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G ++H +KRGF+ + +L++ Y +C ++ +F MP + + W I+
Sbjct: 692 LGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNL 751
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
Q+ + ++ + F++M S LK T + VL AC G + A I + +GL+ +
Sbjct: 752 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF-RFGLDSDV 810
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
++ + + G + A ++ M + + + W SM+ +
Sbjct: 811 SLCNPLISMYSKNGKLELARRVFDSMENR-NTSSWNSMISS 850
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 292/593 (49%), Gaps = 46/593 (7%)
Query: 108 YSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYS 165
+ LK C DL G+ +H + + T L N L +Y KC L+ R++FD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 166 NWAASAYGNVALWNSMLSG-GKQVHAFCVKRGFEK----EDVTLTSLIDMYLKCGEIDDG 220
+ NV +N+++S K+ + + F++ + V+ +LI Y + G+
Sbjct: 71 DC------NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPA 124
Query: 221 LALFNFMPER----DVVSWTGIIVGC------------------FECSCFTLSALVDMYS 258
LF M E D + +GII C + +AL+ YS
Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYS 184
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
L EAR++F W + V+ WNSM+ Y+ + + +A+ L + G+ +D
Sbjct: 185 KNGFLKEARRIF----HWLSEDRDEVS-WNSMVVAYMQHREGSKALELYLEMTVRGLIVD 239
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGN-VKSALE 377
+T S L A N+ + LQ H ++ SGY + VGS LIDLY++ G + +
Sbjct: 240 IFTLASVLTAFTNVQDLLG--GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 378 LFHRLPKKDVVAWSGLIMGCTKH-GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
+F + D+V W+ +I G + + L+ A FR + + + V+ CS ++
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMS 357
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
S +G+QVH +K I++ +LI MY KCG + D LF MPE + VS+ +I
Sbjct: 358 SPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMI 417
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G Q+G +++ FQ M++ P ITF+ VL+AC H G VE+ F MK ++G+
Sbjct: 418 AGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGI 477
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP H+ CM+DLLG+AG +AE+LI +PF P W+++L AC H N +L A
Sbjct: 478 EPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAAN 537
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+LL P + + YVML+N+Y+ G + VRK + G +KK G SWIEV+
Sbjct: 538 RLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVN 590
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/596 (24%), Positives = 263/596 (44%), Gaps = 77/596 (12%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHC-------------------------------RIIK 31
L + L+ C R ++ GKSLH R+
Sbjct: 8 LHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 32 YGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRL 91
+ ++F+ N L+S YA + + AH+LFDEM + + VS+ T++ AY A +L
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 92 YNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYV 151
+ M E ++ +GF S ++ AC + ++ L R +H L+ + N L+ Y
Sbjct: 128 FLEMRE-AFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYS 184
Query: 152 KCGSL--TRKLFDQYSNWAASAYGNVALWNSML-------SGGKQVHAFC--VKRGFEKE 200
K G L R++F +W + V+ WNSM+ G K + + RG +
Sbjct: 185 KNGFLKEARRIF----HWLSEDRDEVS-WNSMVVAYMQHREGSKALELYLEMTVRGLIVD 239
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
TL S++ + ++ GL +I + + S L+D+YS C
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFH-----------AKLIKSGYHQNSHVGSGLIDLYSKC 288
Query: 261 -NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ-NEEAITLLSHIHSSGMCID 318
+ + RK+FD+ S+ ++ LWN+MISGY L E ++EA+ + G D
Sbjct: 289 GGCMLDCRKVFDEISN------PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPD 342
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI-VGSNLIDLYARLGNVKSALE 377
+ + AC N+ + + QVHGL + + I V + LI +Y++ GN++ A
Sbjct: 343 DCSLVCVISACSNMSSPSQ--GRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
LF +P+ + V+++ +I G +HG+ + LF+ M+ + SVL C+
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGR 460
Query: 438 LRRGK-QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGII 495
+ GK + K G E E + +ID+ + G++ + L + +P + W+ ++
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL 520
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIFTSMK 550
C +G + AI ++Q L P N ++ + + G +++A ++ M+
Sbjct: 521 GACRIHGNVELAIKAANRLLQ--LDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 220/383 (57%), Gaps = 3/383 (0%)
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WNS+I G V E+A++ + S M ID YT S L + ++ + A+ VH L
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQN--AISVHCL 66
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
I+ +G+E +V + LID+YA+ G + A+ +F ++ KDVV+W+ L+ G + +G A
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF M S +Q ++SVL C+ L + G+Q+HA VK G E SL+ M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG I D F MP RDV+SWT +IVG QNGR K ++ ++ +MI + KP+ ITF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 527 LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMP 586
+G+L AC H GL+ F +M YG++P EHY CM+DLLG++G +A+ L+ +M
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
Query: 587 FKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSK 646
PD +W ++L AC H +L + A+ L P + YVMLSN+Y+ G W+ ++
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366
Query: 647 VRKAGKKLGE-KKAGMSWIEVSS 668
+R+ + G K+ G SWIE +S
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNS 389
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
D V+W+ LI+GC + G A F+ M + + ++++ + SVL + + ++ VH
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+K GFE + +LIDMY K G++D + +F M ++DVVSWT ++ G NG +
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
EAI F +M S + P++I VLSAC +++ I ++ + GLE L +
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATL-VKSGLESSLSVDNSL 183
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
V + + G DA + MP + D W +++ + K +Q++AT
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPTR-DVISWTALIVGYAQNGRGKHSLQFYDQMIAT 237
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 30/332 (9%)
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI---DMYLKCGEIDDGLALFNFMP-ERDVV 233
WNS++ G CV+ GFE++ ++ + DM + + L F M ++ +
Sbjct: 9 WNSLILG-------CVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAI 61
Query: 234 SWTGIIVGC-FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMIS 292
S +I+ FE +AL+DMY+ L A +F + +V W S+++
Sbjct: 62 SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVD------KDVVSWTSLVT 115
Query: 293 GYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGY 352
GY N EEAI L + SG+ D S L AC L + F Q+H +V SG
Sbjct: 116 GYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMD--FGQQIHATLVKSGL 173
Query: 353 ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRD 412
E V ++L+ +YA+ G++ A F +P +DV++W+ LI+G ++G + +
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQ 233
Query: 413 MINSNQDVNQFIISSVLKVCSCLASLRRGKQV-----HAFCVKRGFEKEDITLTSLIDMY 467
MI + + +L CS L G+ + +K G E +ID+
Sbjct: 234 MIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEH----YACMIDLL 289
Query: 468 LKCGEIDDGLALF-KFMPERDVVSWTGIIVGC 498
+ G++ + L + + D V W ++ C
Sbjct: 290 GRSGKLAEAKGLLNQMVVAPDAVVWKALLAAC 321
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
+ ++ S+HC IIK G N L+ MYA L+ A +F +M K++VSWT++V
Sbjct: 55 KVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLV 114
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
T Y+ N AI+L+ M G V P+ ++VL AC+ +D G+ IH + + L
Sbjct: 115 TGYSHNGSYEEAIKLFCKMRISG-VYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGL 173
Query: 137 EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHA 190
E + N+L+ MY KCGS+ + FD +V W +++ G G+ H+
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT------RDVISWTALIVGYAQNGRGKHS 227
Query: 191 F-----CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+ G + + +T L+ G + G A F M + GI G
Sbjct: 228 LQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKV-----YGIKPGPEHY 282
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQ 272
+C ++D+ L EA+ L +Q
Sbjct: 283 AC-----MIDLLGRSGKLAEAKGLLNQ 304
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 17/243 (6%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C + + G+ +H ++K GL + N+L++MYA S+ DA++ FD M
Sbjct: 145 VASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMP 204
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++++SWT ++ Y N R +++ Y+ M+ G+ +P+ + +L ACS +G L GR
Sbjct: 205 TRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT-KPDYITFIGLLFACSHNGLLGSGR 263
Query: 126 LIHERITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSML 182
E + + ++ ++D+ + G L + L +Q + +W ++L
Sbjct: 264 AYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ-----MVVAPDAVVWKALL 318
Query: 183 SGGK-----QVHAFCVKRGFEKE---DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
+ + ++ K FE E + L +MY G+ +D + M R +
Sbjct: 319 AACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICK 378
Query: 235 WTG 237
G
Sbjct: 379 EPG 381
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 188/665 (28%), Positives = 312/665 (46%), Gaps = 55/665 (8%)
Query: 21 QGKSLHCRIIKYGLS-QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAY 79
+G LH ++ GL D+F GN L++ YA DA ++FDEM +++VSW ++V+A
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 80 TSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYD 139
+N A R M+ G V N ++L AC D G +H + + L
Sbjct: 196 LTNGMLEDAKRAVVGMMRSG-VPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSV 254
Query: 140 TVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
L N L+DMY K G L + ++N M EK
Sbjct: 255 VNLGNALVDMYGKFGDLESSMH---------------VFNGMQ---------------EK 284
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWTGIIVGCFECSCFTLSALVD 255
+V+ S I + G +D L +F M E DV V+ + ++ + F L +
Sbjct: 285 NEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELH 344
Query: 256 MYSNCNVLCE----ARKLFDQYSSWAASAYG----------NVALWNSMISGYVLNEQNE 301
YS + A L D Y+ + S NV WN+MI+ N
Sbjct: 345 GYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEA 404
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA L+ + +G C +S+T + L AC + + + Q+H + D V +
Sbjct: 405 EAFRLVIEMQKNGECPNSFTLVNLLPACSRVASV--KMGKQIHAWSIRRSLMSDLFVSNA 462
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+YA+ G + A +F R +KD V+++ LI+G ++ + LF+ M + + +
Sbjct: 463 LIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHD 521
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
L CS L++ ++GK++H VKR + SL+D+Y K G +D +F
Sbjct: 522 AVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFN 581
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ ++DV SW +I+G G +G+ A F M ++ + ++++ VLS C H GLV+
Sbjct: 582 RITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDR 641
Query: 542 AWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
F+ M + ++P HY CMVDLLG+AG ++ ++I MPF+ + +W ++L +C
Sbjct: 642 GKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSC 700
Query: 602 ETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAG 660
H + +L + AE L PE+ Y +L N+Y+ GMW+ + V+K K + +K
Sbjct: 701 RIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPA 760
Query: 661 MSWIE 665
SW++
Sbjct: 761 YSWVQ 765
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 252/545 (46%), Gaps = 47/545 (8%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+++ +V L CG R G +H ++K+GL+ + GN L+ MY F L + +
Sbjct: 218 VNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHV 277
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+ M KN VSW + + + + ++ M E+ V P S++L A G
Sbjct: 278 FNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEH-DVTPGSVTLSSLLPALVDLGY 336
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVK--CGSLTRKLFDQYSNWAASAYGNVALW 178
LG+ +H R +E D + NTL+DMY K C +F+ NV W
Sbjct: 337 FHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIE------VRNVVSW 390
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE--------- 229
N+M++ Q G E E L +I+M K GE + L N +P
Sbjct: 391 NAMIANLTQ-------NGAEAEAFRL--VIEMQ-KNGECPNSFTLVNLLPACSRVASVKM 440
Query: 230 -RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ + +W+ I F +AL+D+Y+ C L AR +FD+ S +N
Sbjct: 441 GKQIHAWS--IRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVS-------YN 491
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
++I GY ++ E++ L + +G+ D+ +F L AC NL F ++HG++V
Sbjct: 492 TLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQ--GKEIHGVLV 549
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+ + ++L+D+Y + G + +A ++F+R+ +KDV +W+ +I+G HG +A+
Sbjct: 550 KRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFE 609
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
LF M + + + +VL VCS + RGK+ + + + + + + ++D+
Sbjct: 610 LFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLG 669
Query: 469 KCGEIDDGLALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
+ G++ + + + MP R DV W ++ C +G + A + + + LKP
Sbjct: 670 RAGQLSESAEIIRNMPFRANSDV--WGALLGSCRIHGDIELARLAAEHLFE--LKPENSG 725
Query: 526 FLGVL 530
+ +L
Sbjct: 726 YYTLL 730
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/713 (26%), Positives = 320/713 (44%), Gaps = 125/713 (17%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + GK +H I DI +L++MYA S DA +FD MARK+IV+W
Sbjct: 134 CSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTW 193
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERIT 132
M A N + + +R ++ V+PN Y+++ + S L R + +R+
Sbjct: 194 NAMAGASVHNGQSHKLLR----EMDLQGVKPNATTYASITRG---SSTLTGCRAMEQRLL 246
Query: 133 REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------ 184
+ N L+++Y KCG L RK+F++ +V W++M+S
Sbjct: 247 ASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLER------KDVISWSTMISAYNQSGR 300
Query: 185 ---------------------------------------GKQVHAFCVKRGFEKEDVTLT 205
G QVH V G E + +
Sbjct: 301 HSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGS 360
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSW------------------------------ 235
+L+ MY+KCG ++D F+ + +RDV+ W
Sbjct: 361 ALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDVEPNAV 420
Query: 236 --TGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
T +++ C E +AL+ +Y C L A ++F+
Sbjct: 421 TYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFE-- 478
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
A +V WN M+ GY+ ++ + EA+ L + +H +G+ ++ TF +ALKAC +
Sbjct: 479 ----AMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIK 534
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF--HRLPKKDVVAWS 391
+ + +V +I T G+E D + + L+++YA G++++A +F R ++DVV W+
Sbjct: 535 DIET--GSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWT 592
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I + G A L++ M++ N +SVL CS L ++ G+++H+ +
Sbjct: 593 AMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGK 652
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
E + SL+ MY +CG + D + F + RDV SWTG++ +G + A+
Sbjct: 653 AEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELV 712
Query: 512 QEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQ 571
+EM + P+ +TF VL AC H G +E W F SM +Y +EP +HY CMVDLL +
Sbjct: 713 REMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLAR 772
Query: 572 AGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPED 624
AG +A ++I + + + W +L A TH+N + + A Q +A PED
Sbjct: 773 AGRLAEAREVIQFVGLERESMGWMMLLGASRTHSNLAM-GVEAAQCVA--PED 822
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/693 (25%), Positives = 308/693 (44%), Gaps = 108/693 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
L+ R G +++ N L+ ++ F + + ++FD M +KN+ SW+ M+ AY N
Sbjct: 45 LYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGH 104
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMN 144
N A L+ M G + PN VL ACS +L G+ +H I+ + ++D L
Sbjct: 105 RNEAFLLFERMESEG-IRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQT 163
Query: 145 TLLDMYVKCGSL--TRKLFDQYS-----NWAASA-------------------------- 171
+L++MY KCGS + +FD + W A A
Sbjct: 164 SLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLLREMDLQGVKPNAT 223
Query: 172 -YGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
Y ++ +S L+G + + + G+ +L+++Y KCG+++ +FN + +
Sbjct: 224 TYASITRGSSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERK 283
Query: 231 DVVSWT------------------------------------GIIVGCFECS-------- 246
DV+SW+ G+I C C
Sbjct: 284 DVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQV 343
Query: 247 ------------CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
SALV MY C L +A+K FD+ +V WN M+S Y
Sbjct: 344 HGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKR------DVLCWNFMLSAY 397
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
++ I + ++ T+T+ L AC + + +VH IV+SG E
Sbjct: 398 SERGSPQQVIEAYEAMDVEP---NAVTYTNVLIACSAMEDLAQ--GQKVHSRIVSSGLET 452
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D + + L+ LY + ++KSA ++F + KKDV+ W+ +++G H ++ A L+ M
Sbjct: 453 DMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMH 512
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + N ++ LK CS + + G +V A +GFE + +T T+L++MY CG+++
Sbjct: 513 EAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLE 572
Query: 475 DGLALF--KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+F + RDVV WT +I Q GR +EA+A ++ M+ +KPN +T+ VLSA
Sbjct: 573 AAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSA 632
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C G + E I + ++ + E + ++ + + G DA A++ + D
Sbjct: 633 CSSLGNILEGRKIHSKLEGK-AEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNR-DVF 690
Query: 593 IWASMLKACETHNNT-KLVSIIAE-QLLATSPE 623
W M+ A H ++ + + ++ E +L SP+
Sbjct: 691 SWTGMVAAFAHHGHSARALELVREMELCGVSPD 723
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 222/536 (41%), Gaps = 117/536 (21%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
++ A CG + +G +H R++ GL D+ G+ L+ MY SL DA K FD +
Sbjct: 327 VIGACTGCGD---VIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVE 383
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++++ W M++AY+ P I Y M VEPN Y+ VL ACS DL G+
Sbjct: 384 KRDVLCWNFMLSAYSERGSPQQVIEAYEAM----DVEPNAVTYTNVLIACSAMEDLAQGQ 439
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS 183
+H RI LE D + LL +Y+KC SL ++F+ A +V WN M+
Sbjct: 440 KVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFE------AMGKKDVIPWNFMMV 493
Query: 184 G--------------------------------------------GKQVHAFCVKRGFEK 199
G G +V A +GFE
Sbjct: 494 GYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFET 553
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFM--PERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ VT T+L++MY CG+++ +F RDVV WT +I
Sbjct: 554 DVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMI------------------ 595
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+S+A + G EEA+ L + S +
Sbjct: 596 ----------------ASYAQAGRG------------------EEALALYKTMLSEEIKP 621
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
+S T+TS L AC +L N ++H + ELD V ++L+ +YAR G+++ A
Sbjct: 622 NSVTYTSVLSACSSLGNILE--GRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWS 679
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
F ++ +DV +W+G++ HG ++ A L R+M + SVL CS S
Sbjct: 680 CFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGS 739
Query: 438 LRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSW 491
L RG + V E ++D+ + G + + + +F+ ER+ + W
Sbjct: 740 LERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMGW 795
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 24/311 (7%)
Query: 350 SGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
+GY LD + N LI L+ + GN + + E+F + +K+V +WS +I ++G + A+L
Sbjct: 52 TGY-LDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFL 110
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMY 467
LF M + N VL CS L GK+VHA+ F K DI+L TSL++MY
Sbjct: 111 LFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEF-KWDISLQTSLVNMY 169
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
KCG D A+F M +D+V+W + NG++ + +EM +KPN T+
Sbjct: 170 AKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHK---LLREMDLQGVKPNATTYA 226
Query: 528 GV------LSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
+ L+ CR +E+ + S G H+ +V++ + G + A ++
Sbjct: 227 SITRGSSTLTGCR---AMEQ--RLLAS-----GYMSHVPVQNALVNVYAKCGDLEGARKV 276
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
+ K D W++M+ A I + + + +P+ + + A G
Sbjct: 277 FNRLERK-DVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCG 335
Query: 642 DSLSKVRKAGK 652
D + ++ G+
Sbjct: 336 DVIRGIQVHGR 346
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 258/495 (52%), Gaps = 37/495 (7%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD-------GLALFNFMPERDVVS 234
L+ G+ +H + ++ G + + T +L++MY K +++ +F+ M ER
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR-- 179
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
S T+S L + RK+F+ ++ WN++I+G
Sbjct: 180 -----------SVRTVSVLSED--------SVRKIFEMMPE------KDLVSWNTIIAGN 214
Query: 295 VLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL 354
N EE + ++ + + + DS+T +S L N + ++HG + G +
Sbjct: 215 ARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE--NVDISRGKEIHGCSIRQGLDA 272
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V S+LID+YA+ V + +F L ++D ++W+ +I GC ++GL FR M+
Sbjct: 273 DIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML 332
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+ + SS++ C+ L +L GKQ+H + + GF++ +SL+DMY KCG I
Sbjct: 333 MAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIR 392
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F M RD+VSWT +I+GC +G+A +AI F++M +KPN + F+ VL+AC
Sbjct: 393 TAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H GLV+EAW F SM ++G+ P +EHY + DLLG+AG ++A I M P +IW
Sbjct: 453 HGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIW 512
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
A++L AC H N + +A ++L P + Y++L+N+Y+ W +K R + +++
Sbjct: 513 ATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRI 572
Query: 655 G-EKKAGMSWIEVSS 668
G K SWIEV +
Sbjct: 573 GIRKTPACSWIEVKN 587
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 186/394 (47%), Gaps = 42/394 (10%)
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
+YS+ N+L ++ +LF+ A A W S+I Y + +++ + +SG+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALA------WKSVIRCYTSHGLPHQSLGSFIGMLASGL 102
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL------ 369
D F S LK+C L++ N +HG I+ G + D G+ L+++Y++L
Sbjct: 103 YPDHNVFPSVLKSCALLMDLN--LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEES 160
Query: 370 -------GNV-------------------KSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
G V S ++F +P+KD+V+W+ +I G ++GL
Sbjct: 161 GRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLY 220
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
+ R+M +N + F +SSVL + + + RGK++H +++G + + +SL
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
IDMY KC + D +F + ERD +SW II GC QNG E + +F++M+ +++KP
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 524 ITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIA 583
+F ++ AC H + + + G + ++ +VD+ + G A+Q+
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYIT-RNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 584 EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
M + D W +M+ C H + EQ+
Sbjct: 400 RMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQM 432
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 223/463 (48%), Gaps = 62/463 (13%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR+ +S Q + LH +++K+ + + + LLS+Y+ L+D+ +LF+ +
Sbjct: 13 LRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
++W +++ YTS+ P+ ++ + ML G + P+ ++ +VLK+C+L DL+LG +H
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASG-LYPDHNVFPSVLKSCALLMDLNLGESLHG 130
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTR---------KLFDQYSNWAASAY-------- 172
I R L++D N L++MY K L ++FD+ + S
Sbjct: 131 YIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSED 190
Query: 173 -----------GNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM---YLKCGEID 218
++ WN++++G + G +E TL + +M LK
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGN-------ARNGLYEE--TLRMIREMGGANLK----P 237
Query: 219 DGLALFNFMP---ERDVVSWTGIIVGC-----FECSCFTLSALVDMYSNCNVLCEARKLF 270
D L + +P E +S I GC + + S+L+DMY+ C + ++ ++F
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ + WNS+I+G V N +E + + + + SY+F+S + AC
Sbjct: 298 TLLTERDGIS------WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACA 351
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+L + Q+HG I +G++ + + S+L+D+YA+ GN+++A ++F R+ +D+V+W
Sbjct: 352 HLTTLH--LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSW 409
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
+ +IMGC HG A LF M N +VL CS
Sbjct: 410 TAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C ++ GK LH I + G ++IF ++L+ MYA ++ A ++FD M +++VSW
Sbjct: 350 CAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSW 409
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
T M+ + + AI L+ M E ++PN + AVL ACS G +D
Sbjct: 410 TAMIMGCALHGQAPDAIELFEQM-ETEGIKPNHVAFMAVLTACSHGGLVD 458
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,425,942,162
Number of Sequences: 23463169
Number of extensions: 431649677
Number of successful extensions: 1126506
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7391
Number of HSP's successfully gapped in prelim test: 3542
Number of HSP's that attempted gapping in prelim test: 898324
Number of HSP's gapped (non-prelim): 68395
length of query: 668
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 519
effective length of database: 8,863,183,186
effective search space: 4599992073534
effective search space used: 4599992073534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)