BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005943
(668 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/718 (50%), Positives = 474/718 (66%), Gaps = 89/718 (12%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MDL+ I LRHCG+ ++ K+G+S+ +IK G+SQ++F NN++SMY DF L+DAHK+
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDEM+ +NIV+WTTMV+ YTS+ +PN AI LY ML+ N FMYSAVLKAC L GD
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
+ LG L++ERI +E L D VLMN+++DMYVK G +L + S++ + WN+
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG----RLIEANSSFKEILRPSSTSWNT 178
Query: 181 MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT---- 236
++SG Y K G +D+ + LF+ MP+ +VVSW
Sbjct: 179 LISG--------------------------YCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 237 --------------------GIIVGCFECSC----------------------------- 247
G+++ F C
Sbjct: 213 GFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESS 272
Query: 248 -FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
F +SAL+DMYSNC L A +F Q S+ VA+WNSM+SG+++NE+NE A+ L
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS---VAVWNSMLSGFLINEENEAALWL 329
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLY 366
L I+ S +C DSYT + ALK CIN +N R LQVH L+V SGYELDYIVGS L+DL+
Sbjct: 330 LLQIYQSDLCFDSYTLSGALKICINYVNL--RLGLQVHSLVVVSGYELDYIVGSILVDLH 387
Query: 367 ARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIIS 426
A +GN++ A +LFHRLP KD++A+SGLI GC K G NSLA+ LFR++I D +QFI+S
Sbjct: 388 ANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVS 447
Query: 427 SVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER 486
++LKVCS LASL GKQ+H C+K+G+E E +T T+L+DMY+KCGEID+G+ LF M ER
Sbjct: 448 NILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER 507
Query: 487 DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIF 546
DVVSWTGIIVG GQNGR +EA YF +MI ++PN++TFLG+LSACRH+GL+EEA +
Sbjct: 508 DVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTL 567
Query: 547 TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNN 606
+MK EYGLEP+LEHYYC+VDLLGQAG F +A +LI +MP +PDKTIW S+L AC TH N
Sbjct: 568 ETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKN 627
Query: 607 TKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKAGMSWI 664
LV++IAE+LL P+DPS Y LSN YATLGMWD LSKVR+A KKLG K++GMSWI
Sbjct: 628 AGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKESGMSWI 685
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 361/689 (52%), Gaps = 62/689 (8%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
LR + + C RS+ QG+ +H I+ D N++LSMY SL DA ++FD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
M +N+VS+T+++T Y+ N + AIRLY ML+ V P+ F + +++KAC+ S D+
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVG 185
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG----NVALW 178
LG+ +H ++ + + + N L+ MYV+ F+Q S+ + YG ++ W
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVR--------FNQMSDASRVFYGIPMKDLISW 237
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM----------YL------KCGEI---DD 219
+S+++G Q+ GFE E L+ L +M Y+ C + D
Sbjct: 238 SSIIAGFSQL-------GFEFE--ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 220 GLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAAS 279
G + + ++ I GC +L DMY+ C L AR++FDQ
Sbjct: 289 GSQIHGLCIKSELAG--NAIAGC---------SLCDMYARCGFLNSARRVFDQIER---- 333
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
+ A WN +I+G N +EA+++ S + SSG D+ + S L A + +
Sbjct: 334 --PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ-- 389
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCT 398
+Q+H I+ G+ D V ++L+ +Y ++ LF D V+W+ ++ C
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 399 KHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDI 458
+H LF+ M+ S + + + ++L+ C ++SL+ G QVH + +K G E
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 459 TLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR 518
LIDMY KCG + +F M RDVVSW+ +IVG Q+G +EA+ F+EM +
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 519 LKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDA 578
++PN +TF+GVL+AC H GLVEE ++ +M+ E+G+ P EH C+VDLL +AG ++A
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 579 EQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATL 638
E+ I EM +PD +W ++L AC+T N L AE +L P + + +V+L +++A+
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Query: 639 GMWDSLSKVRKAGKKLGEKK-AGMSWIEV 666
G W++ + +R + KK KK G SWIE+
Sbjct: 690 GNWENAALLRSSMKKHDVKKIPGQSWIEI 718
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 149/620 (24%), Positives = 258/620 (41%), Gaps = 144/620 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
++ C + GK LH ++IK S + N L++MY F ++DA ++F + K++
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SW++++ ++ A+ ML +G PN +++ + LKACS D G IH
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQY-----SNW-------AASAYGN- 174
+ +L + + +L DMY +CG L R++FDQ ++W A + Y +
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 175 -VALWNSM------------------------LSGGKQVHAFCVKRGFEKEDVTLTSLID 209
V++++ M LS G Q+H++ +K GF + SL+
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 210 MYLKCGEIDDGLALF-NFMPERDVVSWTGIIVGCF------------------ECS---- 246
MY C ++ LF +F D VSW I+ C EC
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 247 ----------------------CFTL-----------SALVDMYSNCNVLCEARKLFDQY 273
C++L + L+DMY+ C L +AR++FD
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
+ +V W+++I GY + EEA+ L + S+G+ + TF L AC
Sbjct: 535 DN------RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC---- 584
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKD 386
S L GL + + + ++ + S ++DL AR G + A + + D
Sbjct: 585 ---SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD 641
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
VV W L+ C G LA +++ ++ F ++ + +CS AS G +A
Sbjct: 642 VVVWKTLLSACKTQGNVHLAQKAAENILK----IDPFNSTAHVLLCSMHAS--SGNWENA 695
Query: 447 FCVKRGFEKED---ITLTSLIDMYLKCGEIDDGLALF----KFMPERDVVS------WTG 493
++ +K D I S I EI+D + +F F PERD + W+
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWI-------EIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQ 748
Query: 494 IIVGCGQNGRAKEAIAYFQE 513
++ C N + K+ + + E
Sbjct: 749 MLDEC--NPQHKKRLQFIHE 766
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 366/690 (53%), Gaps = 65/690 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFT-GNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ + ++ GK +H + K+G D T N L+++Y +K+FD ++ +N
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS---LSGDLDLGR 125
VSW +++++ S ++ A+ + ML+ +VEP+ F +V+ ACS + L +G+
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG--NVALWNSMLS 183
+H R K E ++ ++NTL+ MY K G L S ++G ++ WN++LS
Sbjct: 223 QVHAYGLR-KGELNSFIINTLVAMYGKLGKLAS------SKVLLGSFGGRDLVTWNTVLS 275
Query: 184 GGKQVHAFC---------VKRGFEKEDVTLTSLIDM-----YLKCGEIDDGLALFNFMPE 229
Q V G E ++ T++S++ L+ G+ AL N
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN---- 331
Query: 230 RDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNS 289
G + + F SALVDMY NC + R++FD + LWN+
Sbjct: 332 -----------GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD------RKIGLWNA 374
Query: 290 MISGYVLNEQNEEAITLLSHIH-SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+GY NE ++EA+ L + S+G+ +S T + AC+ F+ + A +HG +V
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA--IHGFVV 432
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G + D V + L+D+Y+RLG + A+ +F ++ +D+V W+ +I G + A L
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 409 LFRDMINSNQDV-----------NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
L M N + V N + ++L C+ L++L +GK++HA+ +K +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
++L+DMY KCG + +F +P+++V++W II+ G +G +EAI + M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+TF+ V +AC H+G+V+E IF MKP+YG+EP +HY C+VDLLG+AG +
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 578 AEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
A QL+ MP +K W+S+L A HNN ++ I A+ L+ P S YV+L+N+Y+
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ G+WD ++VR+ K+ G K+ G SWIE
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 61/446 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEM 64
I L C ++ GK LH +K G L ++ F G+ L+ MY + + ++FD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 65 ARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
+ I W M+ Y+ N+ A+ L+ M E + N + V+ AC SG
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVALWNSML 182
IH + + L+ D + NTL+DMY + G + ++F + + ++ WN+M+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED------RDLVTWNTMI 478
Query: 183 SG--------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+G ++V + + +TL +++ + G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ + + ++ T + VG SALVDMY+ C L +RK+FDQ
Sbjct: 539 IHAYAIKNNLA--TDVAVG---------SALVDMYAKCGCLQMSRKVFDQIPQ------K 581
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
NV WN +I Y ++ +EAI LL + G+ + TF S AC S +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC-------SHSGMV 634
Query: 343 VHGLIVTSGYELDYIVGSN------LIDLYARLGNVKSALELFHRLPK--KDVVAWSGLI 394
GL + + DY V + ++DL R G +K A +L + +P+ AWS L+
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDV 420
H + + +++I +V
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNV 720
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W L+ + L A L + DMI + + ++LK + L + GKQ+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 450 KRGFEKEDITLT-SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAI 508
K G+ + +T+ +L+++Y KCG+ +F + ER+ VSW +I + + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
F+ M+ ++P+ T + V++AC + + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 223/763 (29%), Positives = 365/763 (47%), Gaps = 108/763 (14%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD- 62
RR+ L+ C ++QGK +H +I +S D +T +L MYA S +D K+F
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 63 -EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL---- 117
++ R +I W ++++++ N N A+ Y ML +G V P+ + ++KAC
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNF 154
Query: 118 -----------SGDLDLGRLIHERITREKLEY----------------DTVLMNTLLDMY 150
S +D + + + LEY D V+ N +L+ Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 151 VKCGSLTRKL-------FDQYSNWAASAYGNVALWNS--MLSGGKQVHAFCVKRGFEKED 201
KCG+L + DQ S A + +++ S ++ G Q+H V G + E
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-------------------- 241
SL+ MY KCG DD LF M D V+W +I G
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 242 ------------------------CFECSCFTL-----------SALVDMYSNCNVLCEA 266
C + C+ + SAL+D Y C + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 267 RKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSAL 326
+ +F Q +S +V ++ +MISGY+ N +++ + + + + T S L
Sbjct: 395 QNIFSQCNSV------DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 327 KACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKD 386
LL + ++HG I+ G++ +G +ID+YA+ G + A E+F RL K+D
Sbjct: 449 PVIGILLAL--KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHA 446
+V+W+ +I C + S A +FR M S + IS+ L C+ L S GK +H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
F +K + + ++LIDMY KCG + + +FK M E+++VSW II CG +G+ K+
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 507 AIAYFQEMIQ-SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
++ F EM++ S ++P++ITFL ++S+C H G V+E F SM +YG++P EHY C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VDL G+AG +A + + MPF PD +W ++L AC H N +L + + +L+ P +
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
YV++SN +A W+S++KVR K+ +K G SWIE++
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D I AL C S GK++H +IK+ L+ D+++ + L+ MYA +L A +F
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
M KNIVSW +++ A ++ + ++ L++ M+E + P+ + ++ +C GD+
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 122 DLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAY-GNVALWN 179
D G +T + ++ ++D++ + G LT + Y + + + +W
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT----EAYETVKSMPFPPDAGVWG 716
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDM 210
++L G ++H + E +V + L+D+
Sbjct: 717 TLL-GACRLH-----KNVELAEVASSKLMDL 741
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 224/690 (32%), Positives = 364/690 (52%), Gaps = 54/690 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD L+ C + R + GK +H R+I++ + D N+L+S+Y+ A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 61 FDEMAR---KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSL 117
F+ M R +++VSW+ M+ Y +N R AI+++ LE G V PN + Y+AV++ACS
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRACSN 178
Query: 118 SGDLDLGRLIHERITRE-KLEYDTVLMNTLLDMYVKCGSL---TRKLFDQYSNWAASAYG 173
S + +GR+ + + E D + +L+DM+VK + K+FD+ S
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL------ 232
Query: 174 NVALWNSMLSGGKQ-------VHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALF 224
NV W M++ Q + F V GFE + TL+S+ + C E++
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV---FSACAELE------ 283
Query: 225 NFMPERDVVSWT--GIIVGCFECSCFTLSALVDMYSNCNV---LCEARKLFDQYSSWAAS 279
N + + SW +V ECS LVDMY+ C+ + + RK+FD+ +
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHS-- 335
Query: 280 AYGNVALWNSMISGYVLN-EQNEEAITLLSHIHSSGMC-IDSYTFTSALKACINLLNFNS 337
V W ++I+GY+ N EAI L S + + G + +TF+SA KAC NL +
Sbjct: 336 ----VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD--P 389
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
R QV G G + V +++I ++ + ++ A F L +K++V+++ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
++ A+ L ++ V+ F +S+L + + S+R+G+Q+H+ VK G
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI MY KCG ID +F FM R+V+SWT +I G ++G A + F +MI+
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
+KPNE+T++ +LSAC H GLV E W F SM ++ ++P +EHY CMVDLL +AG D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A + I MPF+ D +W + L AC H+NT+L + A ++L P +P+ Y+ LSN+YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ +++R+ K+ K+ G SWIEV
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 333/669 (49%), Gaps = 34/669 (5%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S++ G+ LH ++K G S D + N L+S+Y +L A +F M++++
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V++ T++ + A+ L+ M +EP+ ++++ ACS G L G+ +H
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV- 188
T+ + + LL++Y KC + L + + NV LWN ML +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETAL----DYFLETEVENVVLWNVMLVAYGLLD 469
Query: 189 ---HAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
++F + R + E++ T S++ ++ G+++ G + + II
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-----------SQIIK 518
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
F+ + + S L+DMY+ L A + ++ A +V W +MI+GY +
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF------AGKDVVSWTTMIAGYTQYNFD 572
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
++A+T + G+ D T+A+ AC L Q+H SG+ D +
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE--GQQIHAQACVSGFSSDLPFQN 630
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
L+ LY+R G ++ + F + D +AW+ L+ G + G N A +F M D
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
N F S +K S A++++GKQVHA K G++ E +LI MY KCG I D F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+ ++ VSW II ++G EA+ F +MI S ++PN +T +GVLSAC H GLV+
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ F SM EYGL P EHY C+VD+L +AG A++ I EMP KPD +W ++L A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-A 659
C H N ++ A LL PED + YV+LSN+YA WD+ R+ K+ G KK
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 660 GMSWIEVSS 668
G SWIEV +
Sbjct: 931 GQSWIEVKN 939
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/677 (24%), Positives = 291/677 (42%), Gaps = 95/677 (14%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ +G+ LH +I+K GL + L Y L A K+FDEM + I +W M+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
S L+ M+ +V PN +S VL+AC S D+ IH RI + L
Sbjct: 160 ELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 137 EYDTVLMNTLLDMYVKCG--SLTRKLFD-----QYSNWAASAYG---------------- 173
TV+ N L+D+Y + G L R++FD +S+W A G
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 174 --------NVALWNSMLSG---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++S+LS G+Q+H +K GF + +L+ +Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFEC--------------------SCFTLSALVDM 256
+ +F+ M +RD V++ +I G +C TL++LV
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 257 YSNCNVLCEARK-------------------LFDQYSSWA----------ASAYGNVALW 287
S L ++ L + Y+ A + NV LW
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
N M+ Y L + + + + + + YT+ S LK CI L + Q+H I
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGEQIHSQI 516
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ + ++L+ V S LID+YA+LG + +A ++ R KDVV+W+ +I G T++ + A
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMY 467
FR M++ ++ +++ + C+ L +L+ G+Q+HA GF + +L+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 468 LKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFL 527
+CG+I++ F+ D ++W ++ G Q+G +EA+ F M + + N TF
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 528 GVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF 587
+ A +++ + + + G + E ++ + + G DAE+ E+
Sbjct: 697 SAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 588 KPDKTIWASMLKACETH 604
K ++ W +++ A H
Sbjct: 756 K-NEVSWNAIINAYSKH 771
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 205/491 (41%), Gaps = 82/491 (16%)
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW--- 235
N L G+++H+ +K G + L D YL G++ +F+ MPER + +W
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 236 --------------------------------TGIIVGCFECSC-----------FTLSA 252
+G++ C S
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 253 LVDMYSNCNVLCE----------ARKLFD-----QYSSWAASAYGNVALWNSMISGYVLN 297
L D CN L + AR++FD +SSW A MISG N
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA-----------MISGLSKN 266
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYI 357
E EAI L ++ G+ Y F+S L AC + + Q+HGL++ G+ D
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL--EIGEQLHGLVLKLGFSSDTY 324
Query: 358 VGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
V + L+ LY LGN+ SA +F + ++D V ++ LI G ++ G A LF+ M
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
+ + ++S++ CS +L RG+Q+HA+ K GF + +L+++Y KC +I+ L
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAG 537
F +VV W ++V G + + F++M + PN+ T+ +L C G
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 538 LVEEAWTIFTS-MKPEYGLEPHLEHYYC--MVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
+E I + +K + L Y C ++D+ + G D A ++ K D W
Sbjct: 505 DLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSW 559
Query: 595 ASMLKACETHN 605
+M+ +N
Sbjct: 560 TTMIAGYTQYN 570
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 210/501 (41%), Gaps = 63/501 (12%)
Query: 195 RGFEKEDVTLTSLIDMYLKC-GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
RG TL L++ LK G +D+G L + + + +G C + L
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI----------LKLGLDSNGCLS-EKL 126
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
D Y L A K+FD+ + WN MI E L + S
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPE------RTIFTWNKMIKELASRNLIGEVFGLFVRMVSE 180
Query: 314 GMCIDSYTFTSALKACIN-LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ + TF+ L+AC + F+ Q+H I+ G +V + LIDLY+R G V
Sbjct: 181 NVTPNEGTFSGVLEACRGGSVAFD--VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVC 432
A +F L KD +W +I G +K+ + A LF DM + SSVL C
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 433 SCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWT 492
+ SL G+Q+H +K GF + +L+ +Y G + +F M +RD V++
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV-----EEAWTI-- 545
+I G Q G ++A+ F+ M L+P+ T ++ AC G + A+T
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 546 -FTSMKP-------------------EYGLEPHLEHYYCMVDLLGQAGCFDDAE---QLI 582
F S +Y LE +E+ +L G DD ++
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 583 AEMPFK---PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV--MLSNVYAT 637
+M + P++ + S+LK C + +L I Q++ T+ + + YV +L ++YA
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAK 537
Query: 638 LG----MWDSLSKVRKAGKKL 654
LG WD L +R AGK +
Sbjct: 538 LGKLDTAWDIL--IRFAGKDV 556
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ A+ C +++K+G+ +H + G S D+ N L+++Y+ + +++ F++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ ++W +V+ + + A+R++ M G ++ N F + + +KA S + ++ G+
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGK 712
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLS-- 183
+H IT+ + +T + N L+ MY KCGS++ D + + N WN++++
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSIS----DAEKQFLEVSTKNEVSWNAIINAY 768
Query: 184 -----GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
G + + +F + VTL ++ G +D G+A F M +S
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
C +VDM + +L A++ + + +W +++S V+
Sbjct: 829 PEHYVC----------VVDMLTRAGLLSRAKEFIQE-----MPIKPDALVWRTLLSACVV 873
Query: 297 NEQNE 301
++ E
Sbjct: 874 HKNME 878
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/747 (30%), Positives = 355/747 (47%), Gaps = 116/747 (15%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+H +II +GL D + N L+++Y+ + A K+F++M +N+VSW+TMV+A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACS-LSGDLDLGR----LIHERITREKLEYD 139
++ ++ PN ++ S+ ++ACS L G GR + + + + D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR---GRWMVFQLQSFLVKSGFDRD 182
Query: 140 TVLMNTLLDMYVKCGSL--TRKLFDQYS-----NWAASAYGNVALWNS------------ 180
+ L+D Y+K G++ R +FD W G V + S
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 181 ---------------------MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
L GGKQ+HA ++ G E + + LID Y+KCG +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 220 GLALFNFMPERDVVSWTGIIVG-------------------------CFECS-----CFT 249
LFN MP ++++SWT ++ G + CS C +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 250 LSAL-------------------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L AL +DMY+ C+ L +ARK+FD + A +V
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF------AAADV 416
Query: 285 ALWNSMISGYV-LNEQNE--EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
L+N+MI GY L Q E EA+ + + + TF S L+A +L + +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG--LSK 474
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q+HGL+ G LD GS LID+Y+ +K + +F + KD+V W+ + G +
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
N A LF ++ S + ++F ++++ LAS++ G++ H +KRG E
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
+L+DMY KCG +D F RDVV W +I +G K+A+ ++M+ ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQL 581
N ITF+GVLSAC HAGLVE+ F M +G+EP EHY CMV LLG+AG + A +L
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 582 IAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMW 641
I +MP KP +W S+L C N +L AE + + P+D + MLSN+YA+ GMW
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 642 DSLSKVRKAGKKLG-EKKAGMSWIEVS 667
KVR+ K G K+ G SWI ++
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 237/594 (39%), Gaps = 114/594 (19%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK +H I++YGL D N L+ Y + AHKLF+ M KNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+SWTT+++ Y N A+ L+ M ++G ++P+ + S++L +C+ L G +H
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ L D+ + N+L+DMY KC LT RK+FD + A +V L+N+M+ G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF------AAADVVLFNAMIEGYSR 428
Query: 185 --------------------------------------------GKQVHAFCVKRGFEKE 200
KQ+H K G +
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 201 DVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNC 260
++LID+Y C + D +F+ M +D+V W + G
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG------------------- 529
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSY 320
YV +NEEA+ L + S D +
Sbjct: 530 ---------------------------------YVQQSENEEALNLFLELQLSRERPDEF 556
Query: 321 TFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFH 380
TF + + A NL + + + H ++ G E + + + L+D+YA+ G+ + A + F
Sbjct: 557 TFANMVTAAGNLASV--QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
+DVV W+ +I HG A + M++ + N VL CS +
Sbjct: 615 SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD-VVSWTGIIVGCG 499
G + ++ G E E ++ + + G ++ L + MP + + W ++ GC
Sbjct: 675 GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 500 QNGRAKEAIAYFQEMIQSRLKPN-EITFLGVLSACRHAGLVEEAWTIFTSMKPE 552
+ G + A + I S K + T L + A + G+ EA + MK E
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK--GMWTEAKKVRERMKVE 786
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 13/278 (4%)
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+A +LL++ + VHG I+ G ELD + + LI+LY+R G + A ++F ++P++
Sbjct: 53 LRASDDLLHYQN----VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER 108
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQD-VNQFIISSVLKVCSCLASLRRGK-- 442
++V+WS ++ C HG+ + ++F + + +D N++I+SS ++ CS L RG+
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWM 166
Query: 443 --QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
Q+ +F VK GF+++ T LID YLK G ID +F +PE+ V+WT +I GC +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
GR+ ++ F ++++ + P+ VLSAC +E I + YGLE
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI-LRYGLEMDAS 285
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
++D + G A +L MP K + W ++L
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLL 322
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 30/300 (10%)
Query: 3 LRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFD 62
L V LR S+ K +H + KYGL+ DIF G+ L+ +Y++ L D+ +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
EM K++V W +M Y A+ L+ L+ P+ F ++ ++ A +
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLE-LQLSRERPDEFTFANMVTAAGNLASVQ 572
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
LG+ H ++ + LE + + N LLDMY KCGS D + + ++A +V WNS++
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE----DAHKAFDSAASRDVVCWNSVI 628
Query: 183 SG------GKQVHAFCVK---RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
S GK+ K G E +T ++ G ++DGL F M +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 234 SWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISG 293
T V +V + L +AR+L ++ + A+ +W S++SG
Sbjct: 689 PETEHYV-----------CMVSLLGRAGRLNKARELIEKMPTKPAA-----IVWRSLLSG 732
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 220/673 (32%), Positives = 360/673 (53%), Gaps = 47/673 (6%)
Query: 10 LRHC-GQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
LR C G R + G +H RIIK G+ D +LL MY +L+DA K+FD M ++
Sbjct: 107 LRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 166
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+V+W+T+V++ N A+R++ M++ G VEP+ +V++ C+ G L + R +H
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ITR+ + D L N+LL MY KCG L + ++F++ A N W +M+S
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI------AKKNAVSWTAMISSYN 279
Query: 185 -----GKQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
K + +F +K G E VTL S++ G I +G ++ F R++
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL----- 334
Query: 238 IIVGCFECSCFTLS-ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ + +LS ALV++Y+ C L + + S N+ WNS+IS Y
Sbjct: 335 ------DPNYESLSLALVELYAECGKLSDCETVLRVVSDR------NIVAWNSLISLYAH 382
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYEL 354
+A+ L + + + D++T S++ AC N L+ Q+HG ++ +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK----QIHGHVIRTDVS- 437
Query: 355 DYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
D V ++LID+Y++ G+V SA +F+++ + VV W+ ++ G +++G + A LF M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 415 NSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+S ++N+ +V++ CS + SL +GK VH + G K+ T T+LIDMY KCG+++
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLN 556
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F+ M R +VSW+ +I G +GR AI+ F +M++S KPNE+ F+ VLSAC
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIW 594
H+G VEE F MK +G+ P+ EH+ C +DLL ++G +A + I EMPF D ++W
Sbjct: 617 HSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVW 675
Query: 595 ASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKL 654
S++ C H ++ I L +D Y +LSN+YA G W+ ++R A K
Sbjct: 676 GSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSS 735
Query: 655 GEKK-AGMSWIEV 666
KK G S IE+
Sbjct: 736 NLKKVPGYSAIEI 748
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 223/521 (42%), Gaps = 83/521 (15%)
Query: 90 RLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDM 149
+L+ H+L G + + + ++++ + G D RL+ E D+ + L+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP----DSFMYGVLIKC 74
Query: 150 YVKCG------SLTRKLFDQYSNWAASAYGNV----ALWNSMLSGGKQVHAFCVKRGFEK 199
V C L +L + + + + +V A LS G +VH +K G +
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT----------------------- 236
+ V TSL+ MY + G + D +F+ MP RD+V+W+
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 237 ------------GIIVGCFECSCFTLS--------------------ALVDMYSNCNVLC 264
++ GC E C ++ +L+ MYS C L
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 265 EARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ ++F++ A N W +MIS Y E +E+A+ S + SG+ + T S
Sbjct: 255 SSERIFEKI------AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 325 ALKAC--INLLNFNSRFALQVHGLIVTSGYELDY-IVGSNLIDLYARLGNVKSALELFHR 381
L +C I L+ R VHG V + +Y + L++LYA G + +
Sbjct: 309 VLSSCGLIGLI----REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
+ +++VAW+ LI G+ A LFR M+ + F ++S + C + G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
KQ+H ++ E + SLIDMY K G +D +F + R VV+W ++ G QN
Sbjct: 425 KQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
G + EAI+ F M S L+ NE+TFL V+ AC G +E+
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 204/450 (45%), Gaps = 53/450 (11%)
Query: 238 IIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLN 297
++ G ++ L++ Y+ +R +F+ + Y + ++ +I V
Sbjct: 25 LVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF------PYPDSFMYGVLIKCNVWC 78
Query: 298 EQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL----QVHGLIVTSGYE 353
+ AI L + S I + F S L+AC SR L +VHG I+ G +
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG-----SREHLSVGGKVHGRIIKGGVD 133
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
D ++ ++L+ +Y + GN+ A ++F +P +D+VAWS L+ C ++G A +F+ M
Sbjct: 134 DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ + + + SV++ C+ L LR + VH ++ F+ ++ SL+ MY KCG++
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F+ + +++ VSWT +I + +++A+ F EMI+S ++PN +T VLS+C
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC 313
Query: 534 RHAGLVEEAWTIFT-SMKPEYGLEPHLEHY-YCMVDLLGQAGCFDDAEQLI--------- 582
GL+ E ++ +++ E L+P+ E +V+L + G D E ++
Sbjct: 314 GLIGLIREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 583 -------------------------AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
KPD AS + ACE L I +
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKV 647
+ T D L ++Y+ G DS S V
Sbjct: 432 IRTDVSDEFVQNSLIDMYSKSGSVDSASTV 461
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 226/544 (41%), Gaps = 109/544 (20%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D ++ + C + ++ +S+H +I + D N+LL+MY+ L + ++F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+++A+KN VSWT M+++Y + A+R ++ M++ G +EPN +VL +C L G +
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPNLVTLYSVLSSCGLIGLI 319
Query: 122 DLGRLIHERITREKLE--YDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
G+ +H R +L+ Y+++ + L+++Y +CG KL D + + N+ WN
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSL-ALVELYAECG----KLSDCETVLRVVSDRNIVAWN 374
Query: 180 SMLS--------------------------------------------GGKQVHAFCVKR 195
S++S GKQ+H ++
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
E V SLIDMY K G +D +FN + R VV+W ++ G
Sbjct: 435 DVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCG-------------- 479
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
F Q N + EAI+L +++ S +
Sbjct: 480 --------------FSQ------------------------NGNSVEAISLFDYMYHSYL 501
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
++ TF + ++AC ++ + VH ++ SG + D + LID+YA+ G++ +A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEK--GKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAA 558
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+F + + +V+WS +I HG A F M+ S N+ + +VL C
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGI 494
S+ GK G ID+ + G++ + K MP D W +
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 495 IVGC 498
+ GC
Sbjct: 679 VNGC 682
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 224/770 (29%), Positives = 361/770 (46%), Gaps = 128/770 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRII-KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ G+R+ I+ G+ +H + L D +++MYA S +D+ +FD + KN
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W ++++Y+ N+ + + + M+ + P+ F Y V+KAC+ D+ +G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
+ + L D + N L+ Y G +T +LFD N+ WNSM+
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER------NLVSWNSMIRVFS 264
Query: 185 ----------------------------------------------GKQVHAFCVKRGFE 198
GK VH + VK +
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG----------------- 241
KE V +L+DMY KCG I + +F ++VVSW ++ G
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 242 --------------------CF---------ECSCFTL-----------SALVDMYSNCN 261
CF E C++L +A V Y+ C
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHS--SGMCIDS 319
L A+++F S ++ WN++I G+ + N+ ++L +H+ SG+ DS
Sbjct: 445 SLSYAQRVFHGIRSKTVNS------WNALIGGHA--QSNDPRLSLDAHLQMKISGLLPDS 496
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+T S L AC L + R +VHG I+ + E D V +++ LY G + + LF
Sbjct: 497 FTVCSLLSACSKLKSL--RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ K +V+W+ +I G ++G A +FR M+ + + V CS L SLR
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 440 RGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCG 499
G++ HA+ +K E + SLIDMY K G I +F + E+ SW +I+G G
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 500 QNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHL 559
+G AKEAI F+EM ++ P+++TFLGVL+AC H+GL+ E MK +GL+P+L
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 560 EHYYCMVDLLGQAGCFDDAEQLIA-EMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLL 618
+HY C++D+LG+AG D A +++A EM + D IW S+L +C H N ++ +A +L
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 619 ATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
PE P YV+LSN+YA LG W+ + KVR+ ++ K AG SWIE++
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 197/500 (39%), Gaps = 111/500 (22%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D+ +V L C + R I GK +H +K L +++ N L+ MY+ + +A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGS-VEPNGFMYSAVLKACSLSGD 120
KN+VSW TMV +++ + + ML G V+ + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALW 178
L + +H +++ Y+ ++ N + Y KCGSL+ +++F + ++ W
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS------W 464
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N+++ G GK+VH F ++
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL- 253
E++ S++ +Y+ CGE+ ALF+ M ++ +VSW +I G + + F AL
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ-NGFPDRALG 583
Query: 254 -----------------VDMYSNCNVLCEAR----------------------KLFDQYS 274
+ ++ C++L R L D Y+
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 275 -----SWAASAYGNV-----ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTS 324
+ ++ + + A WN+MI GY ++ +EAI L + +G D TF
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 325 ALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF--H 380
L AC + L++ R+ Q+ + G + + + +ID+ R G + AL +
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 381 RLPKKDVVAWSGLIMGCTKH 400
+ DV W L+ C H
Sbjct: 761 MSEEADVGIWKSLLSSCRIH 780
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 42/171 (24%)
Query: 111 VLKACSLSGDLDLGRLIHERIT-REKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN- 166
+L+A D+++GR IH+ ++ +L D VL ++ MY CGS +R +FD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 167 ----WAA--SAYGNVALWNSMLSG--------------------------------GKQV 188
W A S+Y L++ +L G V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 189 HAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
H VK G ++ +L+ Y G + D L LF+ MPER++VSW +I
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 343/691 (49%), Gaps = 69/691 (9%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+++ L H Q+R++ G+++H +II+ G S I N L++ YA L AH +F+ +
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 66 RKNIVSWTTMVTAYTSN---KRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
K++VSW +++T Y+ N ++L+ M + PN + + + KA S
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSST 135
Query: 123 LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSML 182
+GR H + + D + +L+ MY K G + D +A N W++M+
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVE----DGLKVFAYMPERNTYTWSTMV 191
Query: 183 SGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN-FMPERDVVS-----WT 236
SG Y G +++ + +FN F+ E++ S +T
Sbjct: 192 SG--------------------------YATRGRVEEAIKVFNLFLREKEEGSDSDYVFT 225
Query: 237 GII--------VGC-FECSCFTL-----------SALVDMYSNCNVLCEARKLFDQYSSW 276
++ VG + C T+ +ALV MYS C L EA K+FD
Sbjct: 226 AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD----- 280
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+S N W++M++GY N ++ EA+ L S + S+G+ YT L AC ++
Sbjct: 281 -SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
Q+H ++ G+E + L+D+YA+ G + A + F L ++DV W+ LI G
Sbjct: 340 E--GKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++ N A +L+R M + N ++SVLK CS LA+L GKQVH +K GF E
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
++L MY KCG ++DG +F+ P +DVVSW +I G NG+ EA+ F+EM+
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFD 576
++P+++TF+ ++SAC H G VE W F M + GL+P ++HY CMVDLL +AG
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 577 DAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
+A++ I +W +L AC+ H +L E+L+A + S YV LS +Y
Sbjct: 578 EAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYT 637
Query: 637 TLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
LG + +V K + G K+ G SWIE+
Sbjct: 638 ALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 342/699 (48%), Gaps = 62/699 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D R L+ C G +H +++ G D+ + LL MYA ++ ++F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ KN VSW+ ++ N + A++ + M + + +Y++VL++C+ +L
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSEL 297
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
LG +H + D ++ LDMY KC ++ + LFD N +Y N
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY------N 351
Query: 180 SMLSG-GKQVHAF--------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+M++G ++ H F + G ++++L+ + + +GL ++
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA--- 408
Query: 231 DVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSM 290
I +A +DMY C L EA ++FD+ A + WN++
Sbjct: 409 --------IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS------WNAI 454
Query: 291 ISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTS 350
I+ + N + E + L + S + D +TF S LKAC + + +++H IV S
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG---GSLGYGMEIHSSIVKS 511
Query: 351 GYELDYIVGSNLIDLYARLG----------------NVKSALELFHRLPKKDV----VAW 390
G + VG +LID+Y++ G NV +E ++ K + V+W
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ +I G + A +LF M+ ++F ++VL C+ LAS GKQ+HA +K
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ + + ++L+DMY KCG++ D +F+ RD V+W +I G +G+ +EAI
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F+ MI +KPN +TF+ +L AC H GL+++ F MK +YGL+P L HY MVD+LG
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYV 629
++G A +LI EMPF+ D IW ++L C H NN ++ LL P+D S Y
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 630 MLSNVYATLGMWDSLSKVRK--AGKKLGEKKAGMSWIEV 666
+LSNVYA GMW+ +S +R+ G KL +K+ G SW+E+
Sbjct: 812 LLSNVYADAGMWEKVSDLRRNMRGFKL-KKEPGCSWVEL 849
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 228/484 (47%), Gaps = 32/484 (6%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV---ALWNSM 181
RL+H +TR + ++ L + V S +Q ++ + + + V
Sbjct: 6 RLLH--MTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGA 63
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ HA + GF L L+ +Y + +F+ MP RDVVSW +I G
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
YS N + +A F+ +V WNSM+SGY+ N ++
Sbjct: 124 ---------------YSKSNDMFKANSFFNMM------PVRDVVSWNSMLSGYLQNGESL 162
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
++I + + G+ D TF LK C L ++ +Q+HG++V G + D + S
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLE--DTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L+D+YA+ +L +F +P+K+ V+WS +I GC ++ L SLA F++M N V+
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
Q I +SVL+ C+ L+ LR G Q+HA +K F + I T+ +DMY KC + D LF
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
+ S+ +I G Q +A+ F ++ S L +EI+ GV AC + E
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 542 AWTIF-TSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
I+ ++K L+ + + +D+ G+ +A ++ EM + D W +++ A
Sbjct: 401 GLQIYGLAIKSSLSLDVCVAN--AAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Query: 601 CETH 604
E +
Sbjct: 458 HEQN 461
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 166/730 (22%), Positives = 286/730 (39%), Gaps = 174/730 (23%)
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+++VS+ +T S +R + + + SV F S V K C+ G L+LG+
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNF--SFVFKECAKQGALELGKQ 69
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLT-----------------RKLFDQYSN--- 166
H + T ++N LL +Y K+ + YS
Sbjct: 70 AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 167 -WAASAYGN------VALWNSMLSG----------------------------------- 184
+ A+++ N V WNSMLSG
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 185 ---------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW 235
G Q+H V+ G + + V ++L+DMY K + L +F +PE++ VSW
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 236 TGIIVGCFEC------------------------------SCFTLSAL------------ 253
+ II GC + SC LS L
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 254 -------------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
+DMY+ C+ + +A+ LFD + +Y N+MI+GY E
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY------NAMITGYSQEEHG 363
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
+A+ L + SSG+ D + + +AC + + LQ++GL + S LD V +
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE--GLQIYGLAIKSSLSLDVCVAN 421
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
ID+Y + + A +F + ++D V+W+ +I ++G LF M+ S +
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
++F S+LK C+ SL G ++H+ VK G SLIDMY KCG I++ +
Sbjct: 482 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 481 -KFMPERDV-------------------VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
+F +V VSW II G ++++A F M++ +
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 521 PNEITFLGVLSACRH---AGLVEE--AWTIFTSMKPEYGLEPHLEHYYC--MVDLLGQAG 573
P++ T+ VL C + AGL ++ A I ++ + Y C +VD+ + G
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--------YICSTLVDMYSKCG 652
Query: 574 CFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSIIAEQLLATSPEDPSKYVMLS 632
D+ +L+ E + D W +M+ H + + + +L + ++ +
Sbjct: 653 DLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISIL 711
Query: 633 NVYATLGMWD 642
A +G+ D
Sbjct: 712 RACAHMGLID 721
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 344/745 (46%), Gaps = 123/745 (16%)
Query: 28 RIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNW 87
R+ G D +++ Y L DA LF EM+ ++V+W M++ +
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AI + +M + SV+ +VL A + +LDLG ++H + L + + ++L+
Sbjct: 311 AIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 148 DMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------------- 184
MY KC + K+F+ A N WN+M+ G
Sbjct: 370 SMYSKCEKMEAAAKVFE------ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
G Q H+ +K+ K +L+DMY KCG ++D
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 222 ALFNFMPERDVVSWTGII------------------------------------------ 239
+F M +RD V+W II
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 240 -------VGCFECSC------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
V C C T S+L+DMYS C ++ +ARK+F W+ V
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS------VVS 597
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
N++I+GY N EEA+ L + + G+ TF + ++AC + Q HG
Sbjct: 598 MNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT--LGTQFHGQ 654
Query: 347 IVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPK-KDVVAWSGLIMGCTKHGLN 403
I G+ E +Y+ G +L+ +Y + A LF L K +V W+G++ G +++G
Sbjct: 655 ITKRGFSSEGEYL-GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A +++M + +Q +VL+VCS L+SLR G+ +H+ + +++T +L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 464 IDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPN 522
IDMY KCG++ +F M R +VVSW +I G +NG A++A+ F M QS + P+
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPD 833
Query: 523 EITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
EITFLGVL+AC HAG V + IF M +YG+E ++H CMVDLLG+ G +A+ I
Sbjct: 834 EITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI 893
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWD 642
KPD +W+S+L AC H + I AE+L+ P++ S YV+LSN+YA+ G W+
Sbjct: 894 EAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWE 953
Query: 643 SLSKVRKAGKKLGEKK-AGMSWIEV 666
+ +RK + G KK G SWI+V
Sbjct: 954 KANALRKVMRDRGVKKVPGYSWIDV 978
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 178/644 (27%), Positives = 296/644 (45%), Gaps = 77/644 (11%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
+++ GK++H + + G+ + GN ++ +YA ++ A K FD + K++ +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y+S +P +R + + E + PN F +S VL C+ +++ GR IH + + LE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 138 YDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAF 191
++ L+DMY KC ++ R++F+ W N W + SG G A
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFE----WIVDP--NTVCWTCLFSGYVKAGLPEEAV 246
Query: 192 CV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
V G + + ++I+ Y++ G++ D LF M DVV+W +I G +
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 247 CFTLS-----------------------ALVDMYSNCN----VLCEARK----------- 268
C T++ + + + +N + V EA K
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 269 -LFDQYSS----------WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
L YS + A N WN+MI GY N ++ + + L + SSG I
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +TFTS L C + + Q H +I+ + VG+ L+D+YA+ G ++ A +
Sbjct: 427 DDFTFTSLLSTCA--ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
+F R+ +D V W+ +I + S A+ LF+ M + ++S LK C+ +
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +GKQVH VK G +++ T +SLIDMY KCG I D +F +PE VVS +I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
QN +EA+ FQEM+ + P+EITF ++ AC H T F + G
Sbjct: 605 YSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEAC-HKPESLTLGTQFHGQITKRGFSS 662
Query: 558 HLEHYYCMVDLLG---QAGCFDDAEQLIAEMPFKPDKTIWASML 598
E Y + LLG + +A L +E+ +W M+
Sbjct: 663 EGE--YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 169/663 (25%), Positives = 291/663 (43%), Gaps = 93/663 (14%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +++ G+ +HC +IK GL ++ + G L+ MYA ++DA ++F+ + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V WT + + Y P A+ ++ M + G P+ + V+ G L RL+
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG----- 184
++ D V N ++ + K G T + ++ +S + S+LS
Sbjct: 286 EMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 185 ----GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
G VHA +K G +SL+ MY KC +++ +F + E++ V W +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 241 G--------------------CFECSCFTLSAL--------------------------- 253
G + FT ++L
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 254 --------VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
VDMY+ C L +AR++F++ NV WN++I YV +E EA
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCD-----RDNVT-WNTIIGSYVQDENESEAFD 515
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L ++ G+ D S LKAC ++ QVH L V G + D GS+LID+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQ--GKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++ G +K A ++F LP+ VV+ + LI G +++ L A +LF++M+ + ++
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITF 632
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL-TSLIDMYLKCGEIDDGLALF-KFM 483
+++++ C SL G Q H KRGF E L SL+ MY+ + + ALF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
+ +V WTG++ G QNG +EA+ +++EM + P++ TF+ VL C + E
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 544 TIFTSMKPEYGLEPHLEH------YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
I + L HL H ++D+ + G + Q+ EM + + W S+
Sbjct: 753 AI-------HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 598 LKA 600
+
Sbjct: 806 ING 808
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 236/508 (46%), Gaps = 41/508 (8%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ G H IIK L++++F GN L+ MYA +L DA ++F+ M ++
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V+W T++ +Y ++ + A L+ M G V +G ++ LKAC+ L G+ +H
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
+ L+ D ++L+DMY KCG + RK+F W+ V N++++G Q
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS------VVSMNALIAGYSQ 607
Query: 188 --------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII 239
+ + RG ++T ++++ K + G + +R S G
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS-EGEY 666
Query: 240 VGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQ 299
+G +L+ MY N + EA LF + SS + + LW M+SG+ N
Sbjct: 667 LGI---------SLLGMYMNSRGMTEACALFSELSSPKS-----IVLWTGMMSGHSQNGF 712
Query: 300 NEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG 359
EEA+ + G+ D TF + L+ C L + R +H LI ++LD +
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL--REGRAIHSLIFHLAHDLDELTS 770
Query: 360 SNLIDLYARLGNVKSALELFHRLPKK-DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ 418
+ LID+YA+ G++K + ++F + ++ +VV+W+ LI G K+G A +F M S+
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 419 DVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCG---EID 474
++ VL CS + G+++ + + G E + ++D+ + G E D
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNG 502
D + P D W+ ++ C +G
Sbjct: 891 DFIEAQNLKP--DARLWSSLLGACRIHG 916
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 231/531 (43%), Gaps = 43/531 (8%)
Query: 136 LEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------GK 186
LE D N++L MY G + L S + + N ++ +LS G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 187 QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
Q+H +K G E+ +L+DMY KC I D +F ++ + + V WT + G +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 247 C--------------------FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVAL 286
+++ Y L +AR LF + SS +V
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS------PDVVA 294
Query: 287 WNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL 346
WN MISG+ AI ++ S + T S L A + N + L VH
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD--LGLVVHAE 352
Query: 347 IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLA 406
+ G + VGS+L+ +Y++ +++A ++F L +K+ V W+ +I G +G +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
LF DM +S +++ F +S+L C+ L G Q H+ +K+ K +L+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
Y KCG ++D +F+ M +RD V+W II Q+ EA F+ M + +
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 527 LGVLSACRHA-GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
L AC H GL + S+K GL+ L ++D+ + G DA ++ + +
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKC--GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYA 636
P + + L A + NN + ++ +++L T +PS+ + V A
Sbjct: 591 P--EWSVVSMNALIAGYSQNNLEEAVVLFQEML-TRGVNPSEITFATIVEA 638
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 171/446 (38%), Gaps = 111/446 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L+ C + QGK +HC +K GL +D+ TG++L+ MY+ + DA K+F +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
++VS ++ Y+ N A+ L+ ML G V P+ ++ +++AC L LG
Sbjct: 592 EWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGT 649
Query: 126 LIHERITREKLEYDTVLMN-TLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSML 182
H +IT+ + + +LL MY+ +T LF + S+ + + LW M+
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS-----IVLWTGMM 704
Query: 183 SG--------------------------------------------GKQVHAFCVKRGFE 198
SG G+ +H+ +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPER-DVVSWTGIIVGCFECSCFTLSALVDMY 257
+++T +LIDMY KCG++ +F+ M R +VVSW +I G
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING---------------- 808
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
Y N E+A+ + + S +
Sbjct: 809 ------------------------------------YAKNGYAEDALKIFDSMRQSHIMP 832
Query: 318 DSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSAL 376
D TF L AC + + R ++ +I G E + ++DL R G ++ A
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 377 ELFH-RLPKKDVVAWSGLIMGCTKHG 401
+ + K D WS L+ C HG
Sbjct: 891 DFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D V LR C S+++G+++H I D T N L+ MYA + + ++F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 62 DEMARK-NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
DEM R+ N+VSW +++ Y N A+++++ M + + P+ + VL ACS +G
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGK 849
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
+ GR I E I + +E + ++D+ + G L D + A + + LW+
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA--DDFIE-AQNLKPDARLWS 906
Query: 180 SMLSGGKQVHA 190
S+L G ++H
Sbjct: 907 SLL-GACRIHG 916
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/655 (30%), Positives = 335/655 (51%), Gaps = 30/655 (4%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C ++ GK + R+IK G ++D+F ++ +YA + +A ++F + ++
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT M++ YT + A+ ++ M G VE N ++V+ AC + +H
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSNWAASAYGNVAL--WNSMLSGG 185
+ + D+ + L+ MY K G L+ ++F+ + NV + ++ G
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPG 435
Query: 186 KQVHAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCF 243
K + F ++ G ++ ++ SL+ + L C ++ G + + + +V + VG
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSV-LDC--LNLGKQVHGYTLKSGLV--LDLTVG-- 488
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
S+L +YS C L E+ KLF + + A W SMISG+ EA
Sbjct: 489 -------SSLFTLYSKCGSLEESYKLFQ------GIPFKDNACWASMISGFNEYGYLREA 535
Query: 304 ITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLI 363
I L S + G D T + L C + + ++HG + +G + +GS L+
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR--GKEIHGYTLRAGIDKGMDLGSALV 593
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
++Y++ G++K A +++ RLP+ D V+ S LI G ++HGL +LLFRDM+ S ++ F
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
ISS+LK + G QVHA+ K G E +SL+ MY K G IDD F +
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 484 PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAW 543
D+++WT +I Q+G+A EA+ + M + KP+++TF+GVLSAC H GLVEE++
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 544 TIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACET 603
SM +YG+EP HY CMVD LG++G +AE I M KPD +W ++L AC+
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 604 HNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK 658
H +L + A++ + P D Y+ LSN+ A +G WD + + RK K G +K
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/701 (24%), Positives = 304/701 (43%), Gaps = 144/701 (20%)
Query: 31 KYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIR 90
+Y L D+F +LLS Y++ S+ DA KLFD + + ++VS M++ Y ++ ++R
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 91 LYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMY 150
++ M G E N Y +V+ ACS L+ + + V+ + L+D++
Sbjct: 137 FFSKMHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 151 VKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----------VHAFCVKRGFEKE 200
K + D Y + S NV WN++++G + H CV GF+K
Sbjct: 196 SK----NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV--GFQKP 249
Query: 201 D-----------------------------------VTLTSLIDMYLKCGEIDDGLALFN 225
D T+++D+Y KCG + + + +F+
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 226 FMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCE 265
+P VVSWT ++ G E + T+++++ +++CE
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 266 ARKL--------FDQYSSWAA------SAYGNVAL----------------WNSMISGYV 295
A ++ F SS AA S G++ L N MI+ +
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFS 429
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA--CINLLNFNSRFALQVHGLIVTSGYE 353
+++ +AI L + + G+ D ++ S L C+NL QVHG + SG
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL-------GKQVHGYTLKSGLV 482
Query: 354 LDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
LD VGS+L LY++ G+++ + +LF +P KD W+ +I G ++G A LF +M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ ++ +++VL VCS SL RGK++H + ++ G +K ++L++MY KCG +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
++ +PE D VS + +I G Q+G ++ F++M+ S + +L A
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAA 662
Query: 534 R-----------HA-----GLVEEA--WTIFTSMKPEYGL------------EPHLEHYY 563
HA GL E + +M ++G P L +
Sbjct: 663 ALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWT 722
Query: 564 CMVDLLGQAGCFDDAEQ---LIAEMPFKPDKTIWASMLKAC 601
++ Q G ++A Q L+ E FKPDK + +L AC
Sbjct: 723 ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 137/626 (21%), Positives = 250/626 (39%), Gaps = 154/626 (24%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF---D 62
+ + CG+ + + +H + K G D L+SMY+ ++ + ++F D
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLD 122
++ R+NIV+ M+T+++ +K+P AIRL+ ML+ G + + CSL LD
Sbjct: 414 DIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEG-------LRTDEFSVCSLLSVLD 464
Query: 123 ---LGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWN 179
LG+ +H + L D + ++L +Y KCGSL + Y + + + A W
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE----ESYKLFQGIPFKDNACWA 520
Query: 180 SMLSG--------------------------------------------GKQVHAFCVKR 195
SM+SG GK++H + ++
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA 580
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVD 255
G +K ++L++MY KCG + +++ +PE D VS + +I G
Sbjct: 581 GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG-------------- 626
Query: 256 MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGM 315
YS ++ ++ L + SG
Sbjct: 627 -YSQHGLI-------------------------------------QDGFLLFRDMVMSGF 648
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
+DS+ +S LKA L+ S QVH I G + VGS+L+ +Y++ G++
Sbjct: 649 TMDSFAISSILKAAA--LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
+ F ++ D++AW+ LI +HG + A ++ M ++ VL CS
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-- 764
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
H V+ + L S++ Y PE + ++
Sbjct: 765 ---------HGGLVEESY----FHLNSMVKDY-------------GIEPENR--HYVCMV 796
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G++GR +EA ++ M +KP+ + + +L+AC+ G VE + K L
Sbjct: 797 DALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGK---VAAKKAIEL 850
Query: 556 EPH-LEHYYCMVDLLGQAGCFDDAEQ 580
EP Y + ++L + G +D+ E+
Sbjct: 851 EPSDAGAYISLSNILAEVGEWDEVEE 876
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 18/283 (6%)
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
L N + LQ H L+ D + +L+ Y+ G++ A +LF +P+ DVV+ +
Sbjct: 61 LCNLRTTKILQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G +H L + F M + N+ SV+ CS L + + V +K
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+ ++ ++LID++ K +D +F+ +V W II G +N F
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 512 QEMIQSRLKPNEITFLGVLSACR-----HAGLVEEAWTIFTSMKPEYGLEPHLEHYYC-- 564
EM KP+ T+ VL+AC G V +A I + G E + + C
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI------KCGAE---DVFVCTA 290
Query: 565 MVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
+VDL + G +A ++ + +P P W ML N+
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSGYTKSNDA 332
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 44/267 (16%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D + L C S+ +GK +H ++ G+ + + G+ L++MY+ SL A +++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
D + + VS +++++ Y+ + L+ M+ G + F S++LKA +LS +
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG-FTMDSFAISSILKAAALSDES 668
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWN 179
LG +H IT+ L + + ++LL MY K GS+ K F Q + ++ W
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING------PDLIAW- 721
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER----DVVSW 235
T+LI Y + G+ ++ L ++N M E+ D V++
Sbjct: 722 -------------------------TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 236 TGIIVGC-----FECSCFTLSALVDMY 257
G++ C E S F L+++V Y
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDY 783
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD I L+ G +H I K GL + G++LL+MY+ F S++D K
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F ++ ++++WT ++ +Y + + N A+++YN M E G +P+ + VL ACS G
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGG 767
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 315/612 (51%), Gaps = 84/612 (13%)
Query: 125 RLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML 182
R +H + + + + N L+D Y KCGSL R++FD+ N+ WNS++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ------RNIYTWNSVV 93
Query: 183 SGGKQV----HAFCVKRGF-EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV---- 233
+G ++ A + R E++ T S++ + + ++ L F M + V
Sbjct: 94 TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 153
Query: 234 SWTGIIVGC--------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
S+ ++ C F + SALVDMYS C + +A+++FD+
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
NV WNS+I+ + N EA+ + + S + D T S + AC +L
Sbjct: 214 GD------RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLS 267
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLP--------- 383
+ +VHG +V + + I+ SN +D+YA+ +K A +F +P
Sbjct: 268 AI--KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 384 ----------------------KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
+++VV+W+ LI G T++G N A LF + +
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGF-----EKEDITL-TSLIDMYLKCGEIDD 475
+ +++LK C+ LA L G Q H +K GF E++DI + SLIDMY+KCG +++
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
G +F+ M ERD VSW +I+G QNG EA+ F+EM++S KP+ IT +GVLSAC H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 536 AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWA 595
AG VEE F+SM ++G+ P +HY CMVDLLG+AG ++A+ +I EMP +PD IW
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 596 SMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
S+L AC+ H N L +AE+LL P + YV+LSN+YA LG W+ + VRK+ +K G
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 656 -EKKAGMSWIEV 666
K+ G SWI++
Sbjct: 626 VTKQPGCSWIKI 637
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/561 (25%), Positives = 252/561 (44%), Gaps = 114/561 (20%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSN 82
+ +H +IK G S +IF N L+ Y+ SL D ++FD+M ++NI +W ++VT T
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 83 KRPNWAIRLYNHMLE-------------------------YGSVEPNGFM-----YSAVL 112
+ A L+ M E + + GF+ +++VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 113 KACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAAS 170
ACS D++ G +H I + D + + L+DMY KCG++ +++FD+ +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD---- 215
Query: 171 AYGNVALWNSMLSG--------------------------------------------GK 186
NV WNS+++ G+
Sbjct: 216 --RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 187 QVHAFCVKRGFEKEDVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
+VH VK + D+ L+ + +DMY KC I + +F+ MP R+V++ T +I G
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG---- 329
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
Y+ AR +F + A NV WN++I+GY N +NEEA++
Sbjct: 330 -----------YAMAASTKAARLMFTKM------AERNVVSWNALIAGYTQNGENEEALS 372
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINL----LNFNSRFALQVHGLIVTSGYELDYIVGSN 361
L + +C Y+F + LKAC +L L + + HG SG E D VG++
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
LID+Y + G V+ +F ++ ++D V+W+ +I+G ++G + A LFR+M+ S + +
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAF-CVKRGFEKEDIT--LTSLIDMYLKCGEIDDGLA 478
+ VL C + G+ H F + R F + T ++D+ + G +++ +
Sbjct: 493 HITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 479 LFKFMP-ERDVVSWTGIIVGC 498
+ + MP + D V W ++ C
Sbjct: 551 MIEEMPMQPDSVIWGSLLAAC 571
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 186/476 (39%), Gaps = 145/476 (30%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + +G +H I K D++ G+ L+ MY+ ++NDA ++FDEM +N+
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++T + N A+ ++ MLE VEP+ ++V+ AC+ + +G+ +H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 130 RITR-EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ---------------YSNWAAS- 170
R+ + +KL D +L N +DMY KC + R +FD Y+ A++
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 171 ---------AYGNVALWNSMLSG------------------------------------- 184
A NV WN++++G
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 185 -------GKQVHAFCVKRGF-----EKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERD 231
G Q H +K GF E++D+ + SLIDMY+KCG +++G +F M ERD
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
VSW +I+G +A + YGN
Sbjct: 458 CVSWNAMIIG----------------------------------FAQNGYGN-------- 475
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
EA+ L + SG D T L AC G S
Sbjct: 476 ----------EALELFREMLESGEKPDHITMIGVLSAC-------GHAGFVEEGRHYFSS 518
Query: 352 YELDYIVG------SNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
D+ V + ++DL R G ++ A + +P + D V W L+ C H
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 333/652 (51%), Gaps = 31/652 (4%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
HC IK G DI+ N +L Y F L A+ LFDEM +++ VSW TM++ YTS +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
A L+ M GS + +G+ +S +LK + DLG +H + + E + + ++
Sbjct: 83 EDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 146 LLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLT 205
L+DMY KC ++ D + + + N WN++++G QV +K F L
Sbjct: 142 LVDMYAKC----ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRD--IKTAF-----WLL 190
Query: 206 SLIDM----YLKCGEIDDGLALFN---FMPERDVVSWTGIIVGCFECSCFTLSALVDMYS 258
L++M + G L L + F V + +G + +A++ Y+
Sbjct: 191 GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG-LQHEITICNAMISSYA 249
Query: 259 NCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCID 318
+C + +A+++FD ++ WNSMI+G+ +E E A L + + D
Sbjct: 250 DCGSVSDAKRVFD-----GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETD 304
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL--GNVKSAL 376
YT+T L AC + F +HG+++ G E + LI +Y + G ++ AL
Sbjct: 305 IYTYTGLLSACSG--EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 377 ELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLA 436
LF L KD+++W+ +I G + GL+ A F + +S V+ + S++L+ CS LA
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 437 SLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGII 495
+L+ G+Q+HA K GF + ++SLI MY KCG I+ F+ + + V+W +I
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
+G Q+G + ++ F +M +K + +TF +L+AC H GL++E + M+P Y +
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 542
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
+P +EHY VDLLG+AG + A++LI MP PD + + L C ++ + +A
Sbjct: 543 QPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVAN 602
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
LL PED YV LS++Y+ L W+ + V+K K+ G KK G SWIE+
Sbjct: 603 HLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/584 (21%), Positives = 241/584 (41%), Gaps = 146/584 (25%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ +H +IK G +++ G++L+ MYA + DA + F E++ N VSW ++ +
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ A L M +V + ++ +L +L + +H ++ + L+++
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 142 LMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N ++ Y CGS++ +++FD ++ WNSM++G
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFD-----GLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLK-- 213
GK +H +K+G E+ +LI MY++
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
G ++D L+LF + +D++SW II G F L + +A K F
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITG------FAQKGLSE---------DAVKFF--- 396
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLL 333
S++ SS + +D Y F++ L++C +L
Sbjct: 397 ----------------------------------SYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK-DVVAWSG 392
+ Q+H L SG+ + V S+LI +Y++ G ++SA + F ++ K VAW+
Sbjct: 423 TL--QLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I+G +HGL ++ LF M N N ++ +++L CS H ++ G
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS-----------HTGLIQEG 529
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
E L +L++ ++K P + + + G+ G +A +
Sbjct: 530 LE-----LLNLME------------PVYKIQPRME--HYAAAVDLLGRAGLVNKA----K 566
Query: 513 EMIQS-RLKPNEI---TFLGVLSACRHAGLVEEAWTIFTSMKPE 552
E+I+S L P+ + TFLGV AC + + ++PE
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE 610
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN- 68
LR C +++ G+ +H K G + F ++L+ MY+ + A K F +++ K+
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
V+W M+ Y + ++ L++ M +V+ + ++A+L ACS +G + G
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQ-NVKLDHVTFTAILTACSHTGLIQEG 529
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 444 VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGR 503
H + +K G + ++D Y+K G + LF MP+RD VSW +I G G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 504 AKEAIAYFQEMIQSRLKPNEITF---LGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
++A F M +S + +F L +++ + L E+ + + G E ++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI----KGGYECNVY 137
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+VD+ + +DA + E+ +P+ W +++
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALI 174
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 276/512 (53%), Gaps = 26/512 (5%)
Query: 159 KLFDQYSNWAASAYGN---VALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+L + AS Y N V L GK+VH GF V L+ MY KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 216 EIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSS 275
+ D +F+ MP RD+ SW + +V+ Y+ +L EARKLFD+ +
Sbjct: 135 SLVDARKVFDEMPNRDLCSW---------------NVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNF 335
+Y W +M++GYV +Q EEA+ L S + + FT ++
Sbjct: 180 --KDSYS----WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN-IFTVSIAVAAAAAVK 232
Query: 336 NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIM 395
R ++HG IV +G + D ++ S+L+D+Y + G + A +F ++ +KDVV+W+ +I
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 396 GCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEK 455
K + LF +++ S + N++ + VL C+ L + GKQVH + + GF+
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 456 EDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI 515
+SL+DMY KCG I+ + P+ D+VSWT +I GC QNG+ EA+ YF ++
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 516 QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCF 575
+S KP+ +TF+ VLSAC HAGLVE+ F S+ ++ L +HY C+VDLL ++G F
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+ + +I+EMP KP K +WAS+L C T+ N L A++L PE+P YV ++N+Y
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 636 ATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
A G W+ K+RK +++G K+ G SW E+
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 209/484 (43%), Gaps = 51/484 (10%)
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
+P Y +++ CS + L+ G+ +HE I V+ N LL MY KCGSL RK
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
+FD+ N ++ WN M++G +V R EK+ + T+++ Y+K
Sbjct: 142 VFDEMPN------RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 215 GEIDDGLALFNFM-------PERDVVSWTG------------------IIVGCFECSCFT 249
+ ++ L L++ M P VS I+ +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
S+L+DMY C + EAR +FD+ +V W SMI Y + + E +L S
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKI------VEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S + YTF L AC +L QVHG + G++ S+L+D+Y +
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLT--TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
GN++SA + PK D+V+W+ LI GC ++G A F ++ S + +VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 430 KVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDV 488
C+ + +G + ++ K T L+D+ + G + ++ MP +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 489 -VSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP-NEITFLGVLSACRHAGLVEEAWTIF 546
W ++ GC G A QE+ +++P N +T++ + + AG EE +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELF--KIEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 547 TSMK 550
M+
Sbjct: 546 KRMQ 549
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 175/478 (36%), Gaps = 149/478 (31%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHK------------- 59
C Q R++++GK +H I G I N LL MYA SL DA K
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 60 ------------------LFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
LFDEM K+ SWT MVT Y +P A+ LY+ M +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRK 159
PN F S + A + + G+ IH I R L+ D VL ++L+DMY KCG + R
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 160 LFDQ-----YSNWAA--SAYGNVALWN------SMLSG---------------------- 184
+FD+ +W + Y + W S L G
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
GKQVH + + GF+ +SL+DMY KCG I+ + + P+ D+VSWT +I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
C + N Q +
Sbjct: 395 CAQ----------------------------------------------------NGQPD 402
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
EA+ + SG D TF + L AC H +V G E Y +
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSAC-------------THAGLVEKGLEFFYSITEK 449
Query: 362 ------------LIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
L+DL AR G + + +P K W+ ++ GC+ +G LA
Sbjct: 450 HRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 28/248 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + + GK +H + + G F ++L+ MY ++ A + D + ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSWT+++ N +P+ A++ ++ +L+ G+ +P+ + VL AC+ +G ++ G
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGT-KPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 130 RIT-REKLEYDTVLMNTLLDMYVKCG------SLTRKLFDQYSN--WAA-----SAYGNV 175
IT + +L + + L+D+ + G S+ ++ + S WA+ S YGN+
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 176 ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPE-----R 230
L ++ + VT ++ ++Y G+ ++ + M E R
Sbjct: 505 DLAEEAAQELFKIEP--------ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 231 DVVSWTGI 238
SWT I
Sbjct: 557 PGSSWTEI 564
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 218/677 (32%), Positives = 328/677 (48%), Gaps = 45/677 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L H +SI + K+LHC +I G +S I + L YA + A KLF+EM + +
Sbjct: 22 LNHFAATQSISKTKALHCHVITGGRVSGHILS--TLSVTYALCGHITYARKLFEEMPQSS 79
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++S+ ++ Y + AI ++ M+ G P+G+ Y V KA + LG ++
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H RI R D + N LL MY+ G + R +FD N +V WN+M+SG
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR------DVISWNTMISGY 193
Query: 185 ---GKQVHAFCVKRGFEKEDVTL--TSLIDMYLKCGEIDD---GLALFNFMPERDVVSWT 236
G A + E V L +++ M CG + D G + + E+ +
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVL 296
+ +ALV+MY C + EAR +FD+ +V W MI+GY
Sbjct: 254 EV-----------KNALVNMYLKCGRMDEARFVFDRMERR------DVITWTCMINGYTE 296
Query: 297 NEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDY 356
+ E A+ L + G+ ++ T S + C + L N L HG V D
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL--HGWAVRQQVYSDI 354
Query: 357 IVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINS 416
I+ ++LI +YA+ V +F K WS +I GC ++ L S A LF+ M
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 417 NQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDG 476
+ + N ++S+L + LA LR+ +H + K GF T L+ +Y KCG ++
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 477 LALFKFMPER----DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSA 532
+F + E+ DVV W +I G G +G A+ F EM++S + PNEITF L+A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 533 CRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT 592
C H+GLVEE T+F M Y HY C+VDLLG+AG D+A LI +PF+P T
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK 652
+W ++L AC TH N +L + A +L PE+ YV+L+N+YA LG W + KVR +
Sbjct: 595 VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 653 KLG-EKKAGMSWIEVSS 668
+G KK G S IE+ S
Sbjct: 655 NVGLRKKPGHSTIEIRS 671
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 43/417 (10%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D IV L CG + ++ G+++H + + L I N L++MY +++A +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M R+++++WT M+ YT + A+ L ++++ V PN ++++ C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCR-LMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNS 180
++ G+ +H R+++ D ++ +L+ MY KC + F +S AS Y + W++
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL-CFRVFS--GASKY-HTGPWSA 390
Query: 181 MLSGGKQ----VHAFCVKRGFEKEDV-----TLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+++G Q A + + +EDV TL SL+ Y ++ + + ++ +
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK-- 448
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
TG F S + LV +YS C L A K+F+ S +V LW ++I
Sbjct: 449 ----TG-----FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK--DVVLWGALI 497
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-------LLNFNSRFALQVH 344
SGY ++ A+ + + SG+ + TFTSAL AC + L F RF L+ +
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF--RFMLEHY 555
Query: 345 GLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ S + + ++DL R G + A L +P + W L+ C H
Sbjct: 556 KTLARSNHY------TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 229/773 (29%), Positives = 364/773 (47%), Gaps = 131/773 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE------ 63
L+ C ++ GK++H ++ G D F +L++MY L+ A ++FD
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 64 -MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL- 121
++ +++ W +M+ Y +R + + ML +G V P+ F S V+ G+
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGNFR 185
Query: 122 -DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALW 178
+ G+ IH + R L+ D+ L L+DMY K G ++F + + + NV LW
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS-----NVVLW 240
Query: 179 NSMLSG--------------------------------------------GKQVHAFCVK 194
N M+ G G+Q+H VK
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDG-------------------------------LAL 223
G + TSL+ MY KCG + + L L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 224 FNFMPERDVV--SWT-GIIVGCFECSCFTL-----------------------SALVDMY 257
F FM ++ V+ S+T ++ C CS L SAL+ +Y
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISC--CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS--GM 315
S C C+ D Y + + ++ W S+ISG N + +EA+ + + +
Sbjct: 419 SKCG--CDP----DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 316 CIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSA 375
DS TS AC L RF LQVHG ++ +G L+ VGS+LIDLY++ G + A
Sbjct: 473 KPDSDIMTSVTNACAGLEAL--RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 376 LELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCL 435
L++F + +++VAW+ +I +++ L L+ LF M++ + I+SVL S
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 436 ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGII 495
ASL +GK +H + ++ G + +LIDMY+KCG +FK M + +++W +I
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 496 VGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGL 555
G G +G A++ F EM ++ P+++TFL ++SAC H+G VEE IF MK +YG+
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 556 EPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAE 615
EP++EHY MVDLLG+AG ++A I MP + D +IW +L A TH+N +L + AE
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEVS 667
+LL PE S YV L N+Y G+ + +K+ K+ G K+ G SWIEVS
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 243/524 (46%), Gaps = 39/524 (7%)
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYS 165
F + ++LKACS +L G+ IH + YD + +L++MYVKCG L + +
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV-QVFD 119
Query: 166 NWAASAYG----NVALWNSMLSGGKQVHAF-----CVKR----GFEKEDVTLTSLIDMYL 212
W+ S G +V +WNSM+ G + F C +R G + +L+ ++ +
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 213 KCGEI--DDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLF 270
K G ++G + FM + + F +AL+DMY + +A ++F
Sbjct: 180 KEGNFRREEGKQIHGFM-----------LRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF 228
Query: 271 DQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACI 330
+ + NV LWN MI G+ + E ++ L ++ + + S +FT AL AC
Sbjct: 229 VEIEDKS-----NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 331 NLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAW 390
+ NS F Q+H +V G D V ++L+ +Y++ G V A +F + K + W
Sbjct: 284 Q--SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 391 SGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVK 450
+ ++ ++ A LF M + + F +S+V+ CS L GK VHA K
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 451 RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
R + ++L+ +Y KCG D +FK M E+D+V+W +I G +NG+ KEA+
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 511 FQEMI--QSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
F +M LKP+ V +AC + + SM + GL ++ ++DL
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDL 520
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSI 612
+ G + A ++ M + W SM+ +C + NN +SI
Sbjct: 521 YSKCGLPEMALKVFTSMS-TENMVAWNSMI-SCYSRNNLPELSI 562
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 256/561 (45%), Gaps = 35/561 (6%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C Q + G+ +HC ++K GL D + +LLSMY+ + +A +F + K
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W MV AY N A+ L+ M + SV P+ F S V+ CS+ G + G+ +H
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---- 184
+ + ++ + + + LL +Y KCG D Y + + ++ W S++SG
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDP----DAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF-MPERDVVSWTGIIVGCF 243
GK A V + +D +L D+ GL F + + TG+++
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL--- 509
Query: 244 ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEA 303
+ F S+L+D+YS C + A K+F S+ N+ WNSMIS Y N E +
Sbjct: 510 --NVFVGSSLIDLYSKCGLPEMALKVFTSMST------ENMVAWNSMISCYSRNNLPELS 561
Query: 304 ITLLSHIHSSGMCIDSYTFTS---ALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
I L + + S G+ DS + TS A+ + +LL S +HG + G D + +
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-----LHGYTLRLGIPSDTHLKN 616
Query: 361 NLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV 420
LID+Y + G K A +F ++ K ++ W+ +I G HG A LF +M + +
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKR-GFEKEDITLTSLIDMYLKCGEIDDGLAL 479
+ S++ C+ + GK + F + G E +++D+ + G +++ +
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 480 FKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE-ITFLGVLSACRHAG 537
K MP E D W ++ + + I ++++ R++P T++ +++ AG
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL--RMEPERGSTYVQLINLYMEAG 794
Query: 538 LVEEAWTIFTSMKPEYGLEPH 558
L EA + MK E GL
Sbjct: 795 LKNEAAKLLGLMK-EKGLHKQ 814
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 278 ASAYGNVALWNSMISGYVLNEQNEEAITLLS-HIHSSGMCIDSYTFTSALKACINLLNFN 336
A +Y + A NS I + + +A+ L S H SS +TF S LKAC L N +
Sbjct: 18 ADSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLS 77
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF-------HRLPKKDVVA 389
+ +HG +V G+ D + ++L+++Y + G + A+++F + +DV
Sbjct: 78 --YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTV 135
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR--GKQVHAF 447
W+ +I G K FR M+ + F +S V+ V + RR GKQ+H F
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 448 CVKRGFEKEDITLTSLIDMYLKCG-EIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ + + T+LIDMY K G ID + + +VV W +IVG G +G +
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHA 536
++ + + +K +F G L AC +
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/635 (31%), Positives = 310/635 (48%), Gaps = 85/635 (13%)
Query: 42 NNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSV 101
N ++S Y A KLFDEM +++VSW M+ Y N+ A L+ M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 102 EPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRK-- 159
++ +L + +G +D R + +R+ E + V N LL YV+ +
Sbjct: 159 S-----WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACM 209
Query: 160 LFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSLIDMYLKC 214
LF NWA + WN +L G + R F ++ V+ ++I Y +
Sbjct: 210 LFKSRENWA------LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYS 274
G+ID+ LF+ P +DV +WT ++ G Y ++ EAR+LFD+
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSG---------------YIQNRMVEEARELFDKMP 308
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
N WN+M++GYV E+ E A L + C N+
Sbjct: 309 E------RNEVSWNAMLAGYVQGERMEMAKELFD-----------------VMPCRNVST 345
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
+N+ +I YA+ G + A LF ++PK+D V+W+ +I
Sbjct: 346 WNT------------------------MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFE 454
G ++ G + A LF M +N+ SS L C+ + +L GKQ+H VK G+E
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 455 KEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEM 514
+L+ MY KCG I++ LFK M +D+VSW +I G ++G + A+ +F+ M
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 515 IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGC 574
+ LKP++ T + VLSAC H GLV++ F +M +YG+ P+ +HY CMVDLLG+AG
Sbjct: 502 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 575 FDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNV 634
+DA L+ MPF+PD IW ++L A H NT+L A+++ A PE+ YV+LSN+
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 621
Query: 635 YATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
YA+ G W + K+R + G KK G SWIE+ +
Sbjct: 622 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 656
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 217/475 (45%), Gaps = 50/475 (10%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+ + N +LS YA ++DA +FD M KN VSW +++AY N + A L+
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-DTVLMNTLLDMYVKCG 154
+ V N C L G + +++ R + + D V NT++ Y + G
Sbjct: 215 ENWALVSWN----------CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSG 264
Query: 155 SL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGF-----EKEDVTLTSL 207
+ R+LFD+ S +V W +M+SG Q R E+ +V+ ++
Sbjct: 265 KIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ Y++ ++ LF+ MP R+V +W +I G Y+ C + EA+
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG---------------YAQCGKISEAK 363
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
LFD+ + W +MI+GY + + EA+ L + G ++ +F+SAL
Sbjct: 364 NLFDKMPK------RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDV 387
C +++ Q+HG +V GYE VG+ L+ +Y + G+++ A +LF + KD+
Sbjct: 418 TCADVVALE--LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 388 VAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ-VHA 446
V+W+ +I G ++HG +A F M + + +VL CS + +G+Q +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
G ++D+ + G ++D L K MP E D W G ++G +
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW-GTLLGASR 589
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 42/302 (13%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+++ T N +++ YA +++A LFD+M +++ VSW M+ Y+ + A+RL+ M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
G N +S+ L C+ L+LG+ +H R+ + E + N LL MY KCGS
Sbjct: 401 EREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 156 L--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKR-GFEKEDVT 203
+ LF + A ++ WN+M++G + H F +KR G + +D T
Sbjct: 460 IEEANDLFKEM------AGKDIVSWNTMIAGYSR-HGFGEVALRFFESMKREGLKPDDAT 512
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ +++ G +D G F M + G++ +C +VD+ +L
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQD-----YGVMPNSQHYAC-----MVDLLGRAGLL 562
Query: 264 CEARKLFDQY------SSW-----AASAYGNVALWNSMISG-YVLNEQNEEAITLLSHIH 311
+A L + W A+ +GN L + + + +N LLS+++
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 312 SS 313
+S
Sbjct: 623 AS 624
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C +++ GK LH R++K G F GN LL MY S+ +A+ LF EMA K+
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
IVSW TM+ Y+ + A+R + M G ++P+ AVL ACS +G +D GR
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPDDATMVAVLSACSHTGLVDKGR 530
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 215/706 (30%), Positives = 352/706 (49%), Gaps = 75/706 (10%)
Query: 1 MDLRRI-VEALRHCGQRRSIKQGKSLHCRIIKYG-LSQDIFTGNNLLSMYADFTSLNDAH 58
+D RR V L+ C R + + ++K G LS + N+LL MY+ + A
Sbjct: 23 VDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIAR 82
Query: 59 KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLS 118
LFDEM +N SW TM+ Y ++ ++R ++ M E +G+ ++ V+ + +
Sbjct: 83 NLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-----PERDGYSWNVVVSGFAKA 137
Query: 119 GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVA 176
G+L + R R+ E D V +N+LL Y+ G +LF + N++A A
Sbjct: 138 GELSVAR----RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-NFSADAITLTT 192
Query: 177 LWNS-----MLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERD 231
+ + L GKQ+HA + G E + +SL+++Y KCG+ L + ++M E+
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD----LRMASYMLEQ- 247
Query: 232 VVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMI 291
E +LSAL+ Y+NC + E+R LFD+ S+ V LWNSMI
Sbjct: 248 ----------IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC------VILWNSMI 291
Query: 292 SGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSG 351
SGY+ N EA+ L + + + DS T + + ACI L + Q+H G
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVINACIGLGFLET--GKQMHCHACKFG 348
Query: 352 YELDYIVGSNLIDLYARLGN-------------------------------VKSALELFH 380
D +V S L+D+Y++ G+ + A +F
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 381 RLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRR 440
R+ K +++W+ + G +++G F M + ++ +SSV+ C+ ++SL
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+QV A G + + + +SLID+Y KCG ++ G +F M + D V W +I G
Sbjct: 469 GEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NG+ EAI F++M + ++P +ITF+ VL+AC + GLVEE +F SMK ++G P E
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKE 588
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H+ CMVDLL +AG ++A L+ EMPF D ++W+S+L+ C + + AE+++
Sbjct: 589 HFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
PE+ YV LS ++AT G W+S + VRK ++ K G SW +
Sbjct: 649 EPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 218/762 (28%), Positives = 354/762 (46%), Gaps = 121/762 (15%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDI-FTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L CG+RR++ QG+ LH RI K S ++ F L+ MY SL+DA K+FDEM +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFM-YSAVLKACSLSGDLDLGRLI 127
+W TM+ AY SN P A+ LY +M G P G + A+LKAC+ D+ G +
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGV--PLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSMLSG- 184
H + + ++N L+ MY K L+ R+LFD + G+ LWNS+LS
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE-----KGDAVLWNSILSSY 259
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
GK++HA +K +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 202 VTL-TSLIDMYLKCGEIDDGLALFNFMPERDV---------------------------- 232
+ + +LI MY +CG++ + M DV
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 233 -------VSWTGIIVGC---------FECSCFTL-----------SALVDMYSNCNVLCE 265
VS T II E + + + L+DMYS CN+ C
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
+ F + ++ W ++I+GY N+ + EA+ L + M ID S
Sbjct: 440 MGRAFLRMHD------KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L+A L + ++H I+ G LD ++ + L+D+Y + N+ A +F + K
Sbjct: 494 LRASSVLKSM--LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
DVV+W+ +I +G S A LFR M+ + + + +L + L++L +G+++H
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
+ +++GF E +++DMY CG++ A+F + + ++ +T +I G +G K
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
A+ F +M + P+ I+FL +L AC HAGL++E M+ EY LEP EHY C+
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 730
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDP 625
VD+LG+A C +A + + M +P +W ++L AC +H+ ++ I A++LL P++P
Sbjct: 731 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 790
Query: 626 SKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
V++SNV+A G W+ + KVR K G EK G SWIE+
Sbjct: 791 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 213/720 (29%), Positives = 337/720 (46%), Gaps = 121/720 (16%)
Query: 52 TSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAV 111
+ L +AH LFD+ ++ S+ +++ ++ + R A RL+ ++ G +E + ++S+V
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSV 99
Query: 112 LKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAA 169
LK + D GR +H + + D + +L+D Y+K + RK+FD+
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-- 157
Query: 170 SAYGNVALWNSMLSG--------------------------------------------G 185
NV W +++SG G
Sbjct: 158 ----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 186 KQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV------------ 233
QVH VK G +K SLI++YLKCG + LF+ + VV
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 234 -----------------------SWTGIIVGC-----------FECSCFTLSALVDM--- 256
S+ +I C CS L D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 257 ------YSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
YS C + +A +LF + GNV W +MISG++ N+ EEA+ L S +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIG-----CVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
G+ + +T++ L A + +VH +V + YE VG+ L+D Y +LG
Sbjct: 389 KRKGVRPNEFTYSVILTALPVIS------PSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
V+ A ++F + KD+VAWS ++ G + G A +F ++ N+F SS+L
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 431 VCSCL-ASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
VC+ AS+ +GKQ H F +K + ++L+ MY K G I+ +FK E+D+V
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
SW +I G Q+G+A +A+ F+EM + ++K + +TF+GV +AC HAGLVEE F M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ + P EH CMVDL +AG + A ++I MP TIW ++L AC H T+L
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSWIEVSS 668
+ AE+++A PED + YV+LSN+YA G W +KVRK ++ +K+ G SWIEV +
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/588 (24%), Positives = 245/588 (41%), Gaps = 136/588 (23%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LHC+ IK+G D+ G +L+ Y ++ D K+FDEM +N+V+WTT+++ Y
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
N + + L+ M G+ +PN F ++A L + G G +H + + L+
Sbjct: 172 NSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 142 LMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--------------- 184
+ N+L+++Y+KCG++ R LFD+ + +V WNSM+SG
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDK------TEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 185 -----------------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+Q+H VK GF + T+L+ Y KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 216 EIDDGLALFNFMP-ERDVVSWTGIIVGC-------------------------------- 242
+ D L LF + +VVSWT +I G
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 243 -------------------FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
+E S +AL+D Y + EA K+F +
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD------KD 458
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ W++M++GY + E AI + + G+ + +TF+S L C N + Q
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASMGQGKQF 517
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG + S + V S L+ +YA+ GN++SA E+F R +KD+V+W+ +I G +HG
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL--- 460
A +F++M ++ V C+ HA V+ G + DI +
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACT-----------HAGLVEEGEKYFDIMVRDC 626
Query: 461 ---------TSLIDMYLKCGEIDDGLALFKFMPERDVVS-WTGIIVGC 498
+ ++D+Y + G+++ + + + MP + W I+ C
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 170/451 (37%), Gaps = 107/451 (23%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA-RKN 68
++ C + ++ + LHC ++KYG D L+ Y+ T++ DA +LF E+ N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+VSWT M++ + N A+ L++ M G V PN F YS +L A + + +H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE----VH 416
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WAASAYG-------- 173
++ + E + + LLD YVK G + K+F + W+A G
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 174 -------------------------NV-ALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSL 207
NV A N+ + GKQ H F +K + ++L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ MY K G I+ +F E+D+VSW +I G
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG-------------------------- 570
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
Y + Q +A+ + + + +D TF
Sbjct: 571 --------------------------YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 604
Query: 328 ACIN--LLNFNSR-FALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPK 384
AC + L+ + F + V + E + S ++DLY+R G ++ A+++ +P
Sbjct: 605 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 385 K-DVVAWSGLIMGCTKHGLNSLAYLLFRDMI 414
W ++ C H L L +I
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 12/277 (4%)
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
FT+ + +L NF +F + +G+ Y + S L + A LF +
Sbjct: 3 FTTTIWRPPSLENFKPKFRIYANGVAQVRIYCFGTVSSSRLYN----------AHNLFDK 52
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG 441
P +D ++ L+ G ++ G A LF ++ +++ I SSVLKV + L G
Sbjct: 53 SPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG 112
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQN 501
+Q+H C+K GF + TSL+D Y+K DG +F M ER+VV+WT +I G +N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 502 GRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEH 561
E + F M +PN TF L G+ + T + + GL+ +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV-VKNGLDKTIPV 231
Query: 562 YYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+++L + G A L + K T W SM+
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMI 267
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ QGK H IK L + + LL+MYA ++ A ++F K++VSW +M++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y + + A+ ++ M + V+ +G + V AC+ +G ++ G + + R+
Sbjct: 570 GYAQHGQAMKALDVFKEMKKR-KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 138 YDTVLMNT-LLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVK 194
T N+ ++D+Y + G L + K+ + N A S +W ++L+ + +
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-----TIWRTILAACRVHKKTELG 683
Query: 195 R-------GFEKEDVTLTSLI-DMYLKCGEIDDGLALFNFMPERDVVSWTG 237
R + ED L+ +MY + G+ + + M ER+V G
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPG 734
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 209/678 (30%), Positives = 337/678 (49%), Gaps = 62/678 (9%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
LR C Q+ K++HC I+K G D+F N LL+ Y DA LFDEM +N
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VS+ T+ Y I LY+ + G E N ++++ LK ++ +H
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGH-ELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ 187
I + + + + L++ Y CGS+ R +F+ ++ +W ++S
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE------GILCKDIVVWAGIVS---- 220
Query: 188 VHAFC-VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER---DVVSWTGIIVGCF 243
C V+ G+ ++ + L S + M FMP D I +G F
Sbjct: 221 ----CYVENGYFEDSLKLLSCMRMA-------------GFMPNNYTFDTALKASIGLGAF 263
Query: 244 EC----------SCFTLS-----ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWN 288
+ +C+ L L+ +Y+ + +A K+F++ +V W+
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK------NDVVPWS 317
Query: 289 SMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIV 348
MI+ + N EA+ L + + + + +T +S L C + S Q+HGL+V
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA--IGKCSGLGEQLHGLVV 375
Query: 349 TSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYL 408
G++LD V + LID+YA+ + +A++LF L K+ V+W+ +I+G G A+
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 409 LFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYL 468
+FR+ + + V + SS L C+ LAS+ G QVH +K K+ SLIDMY
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 469 KCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLG 528
KCG+I ++F M DV SW +I G +G ++A+ M KPN +TFLG
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 529 VLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
VLS C +AGL+++ F SM ++G+EP LEHY CMV LLG++G D A +LI +P++
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 589 PDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVR 648
P IW +ML A NN + AE++L +P+D + YV++SN+YA W +++ +R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 649 KAGKKLGEKK-AGMSWIE 665
K+ K++G KK G+SWIE
Sbjct: 676 KSMKEMGVKKEPGLSWIE 693
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 9 ALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
AL C S+ G +H IK ++ + N+L+ MYA + A +F+EM +
Sbjct: 455 ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID 514
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ SW +++ Y+++ A+R+ + M + +PNG + VL CS +G +D G+
Sbjct: 515 VASWNALISGYSTHGLGRQALRILDIMKDR-DCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 129 ERITRE 134
E + R+
Sbjct: 574 ESMIRD 579
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 339/669 (50%), Gaps = 41/669 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
R+C +++ K LH R++ Q++ L+++Y ++ A FD + +++
Sbjct: 61 FRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
+W M++ Y + IR ++ + + P+ + +VLKAC D G IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
+ +D + +L+ +Y + ++ R LFD+ ++ WN+M+SG
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM------PVRDMGSWNAMISGYCQ 228
Query: 185 -GKQVHAFCVKRGFEKED-VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G A + G D VT+ SL+ + G+ + G+ + ++ + +
Sbjct: 229 SGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL---------- 278
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
E F + L+D+Y+ L + +K+FD+ ++ WNS+I Y LNEQ
Sbjct: 279 -ESELFVSNKLIDLYAEFGRLRDCQKVFDRM------YVRDLISWNSIIKAYELNEQPLR 331
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYEL-DYIVGSN 361
AI+L + S + D T S L + ++ L + R V G + G+ L D +G+
Sbjct: 332 AISLFQEMRLSRIQPDCLTLIS-LASILSQLG-DIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DV 420
++ +YA+LG V SA +F+ LP DV++W+ +I G ++G S A ++ M +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 421 NQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALF 480
NQ SVL CS +LR+G ++H +K G + +TSL DMY KCG ++D L+LF
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 481 KFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+P + V W +I G +G ++A+ F+EM+ +KP+ ITF+ +LSAC H+GLV+
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
E F M+ +YG+ P L+HY CMVD+ G+AG + A + I M +PD +IW ++L A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKA 659
C H N L I +E L PE +V+LSN+YA+ G W+ + ++R G K
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 660 GMSWIEVSS 668
G S +EV +
Sbjct: 690 GWSSMEVDN 698
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 176/457 (38%), Gaps = 123/457 (26%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD +V L C + +G ++H IK+GL ++F N L+ +YA+F L D K+
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD M ++++SW +++ AY N++P AI L+ M ++P+ ++ S GD
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGD 363
Query: 121 LDLGRLIHERITREK--LEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVA 176
+ R + R+ LE D + N ++ MY K G + R +F NW + +V
Sbjct: 364 IRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVF----NWLPNT--DVI 416
Query: 177 LWNSMLSG---------------------------------------------GKQVHAF 191
WN+++SG G ++H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 192 CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLS 251
+K G + +TSL DMY KCG ++D L+LF +P + V W +I C F
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA----CHGF--- 529
Query: 252 ALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH 311
+ E+A+ L +
Sbjct: 530 ---------------------------------------------HGHGEKAVMLFKEML 544
Query: 312 SSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDL 365
G+ D TF + L AC S L G + DY + +L +D+
Sbjct: 545 DEGVKPDHITFVTLLSAC-------SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 366 YARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHG 401
Y R G +++AL+ + + D W L+ C HG
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 325/683 (47%), Gaps = 100/683 (14%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
+HCR+IK GL ++ NNL+++Y+ A KLFDEM + SW T+++AY+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 85 PNWAIRLYNHMLEYGSVEPNGFM--YSAV---LKACSLSGDLDLGRLIHERITREKLEYD 139
+ ++ + + SV + Y + KA + GD+ +E +E
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM----------VKEGIEPT 145
Query: 140 TVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEK 199
+ +L +VA M +G K+VH+F VK G
Sbjct: 146 QFTLTNVL-------------------------ASVAATRCMETG-KKVHSFIVKLGLRG 179
Query: 200 EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
SL++MY KCG+ +F+ M RD+ SW +A++ ++
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW---------------NAMIALHMQ 224
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH-IHSSGMCID 318
+ A F+Q A ++ WNSMISG+ + A+ + S + S + D
Sbjct: 225 VGQMDLAMAQFEQM------AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 319 SYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALEL 378
+T S L AC NL Q+H IVT+G+++ IV + LI +Y+R G V++A L
Sbjct: 279 RFTLASVLSACANLEKLC--IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 379 ---------------------------------FHRLPKKDVVAWSGLIMGCTKHGLNSL 405
F L +DVVAW+ +I+G +HG
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 406 AYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLID 465
A LFR M+ Q N + ++++L V S LASL GKQ+H VK G +LI
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 466 MYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEI 524
MY K G I F + ERD VSWT +I+ Q+G A+EA+ F+ M+ L+P+ I
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 525 TFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAE 584
T++GV SAC HAGLV + F MK + P L HY CMVDL G+AG +A++ I +
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 585 MPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSL 644
MP +PD W S+L AC H N L + AE+LL PE+ Y L+N+Y+ G W+
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEA 636
Query: 645 SKVRKAGKK-LGEKKAGMSWIEV 666
+K+RK+ K +K+ G SWIEV
Sbjct: 637 AKIRKSMKDGRVKKEQGFSWIEV 659
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 218/520 (41%), Gaps = 124/520 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA------------------DFTSLND-- 56
R ++ GK +H I+K GL ++ N+LL+MYA D +S N
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 57 -----------AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNG 105
A F++MA ++IV+W +M++ + A+ +++ ML + P+
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 106 FMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQ 163
F ++VL AC+ L +G+ IH I + +++N L+ MY +CG + R+L +Q
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 164 YSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
G K + GF T+L+D Y+K G+++ +
Sbjct: 340 -------------------RGTKDLKI----EGF-------TALLDGYIKLGDMNQAKNI 369
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
F + +RDVV+WT +IVG ++Q+ S+ +
Sbjct: 370 FVSLKDRDVVAWTAMIVG----------------------------YEQHGSYGEA---- 397
Query: 284 VALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQV 343
+ L+ SM+ G G +SYT A + + Q+
Sbjct: 398 INLFRSMVGG--------------------GQRPNSYTL--AAMLSVASSLASLSHGKQI 435
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGL 402
HG V SG V + LI +YA+ GN+ SA F + ++D V+W+ +I+ +HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 403 NSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS 462
A LF M+ + V C+ + +G+Q F + + +K TL+
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSH 553
Query: 463 ---LIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGC 498
++D++ + G + + + MP E DVV+W ++ C
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 69/282 (24%)
Query: 321 TFTSALKACINLLN-----FNSRFALQ-VHGLIVTSGYELDYIVGSNLIDLYARL----- 369
+ ++ L+ C NLL N RF Q VH ++ SG + +NL+++Y++
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 370 --------------------------GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
G++ S E F +LP++D V+W+ +I+G G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
A + DM+ + QF +++VL + + GK+VH+F VK G SL
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 464 IDMYLKC-------------------------------GEIDDGLALFKFMPERDVVSWT 492
++MY KC G++D +A F+ M ERD+V+W
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 493 GIIVGCGQNGRAKEAIAYFQEMIQ-SRLKPNEITFLGVLSAC 533
+I G Q G A+ F +M++ S L P+ T VLSAC
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 266/520 (51%), Gaps = 55/520 (10%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GKQ+H G + + S+ MY++CG + D +F+ M ++DVV
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV----------- 183
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
T SAL+ Y+ L E ++ + S A N+ WN ++SG+ + ++EA+
Sbjct: 184 ----TCSALLCAYARKGCLEEVVRILSEMESSGIEA--NIVSWNGILSGFNRSGYHKEAV 237
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ IH G C D T +S L + + N +HG ++ G D V S +ID
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN--MGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 365 LYARLGNV-------------------------------KSALELFHRLPKK----DVVA 389
+Y + G+V ALE+F ++ +VV+
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ +I GC ++G + A LFR+M + N I S+L C +A+L G+ H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ ++LIDMY KCG I+ +F MP +++V W ++ G +G+AKE ++
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F+ ++++RLKP+ I+F +LSAC GL +E W F M EYG++P LEHY CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A LI EMPF+PD +W ++L +C NN L I AE+L PE+P YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 630 MLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
+LSN+YA GMW + +R + LG KK G SWI+V +
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 222/550 (40%), Gaps = 97/550 (17%)
Query: 26 HCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRP 85
H RI+K G D + L++ Y+++ NDA + + I S+++++ A T K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 86 NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNT 145
+I +++ M +G + P+ + + K C+ +G+ IH L+ D + +
Sbjct: 98 TQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 146 LLDMYVKCGSL--TRKLFDQYSN-----------------------------WAASAYGN 174
+ MY++CG + RK+FD+ S+ ++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 175 VALWNSMLSG--------------------------------------------GKQVHA 190
+ WN +LSG G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 191 FCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTL 250
+ +K+G K+ ++++IDMY K G + ++LFN + I G +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG------LSR 330
Query: 251 SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI 310
+ LVD +A ++F+ + NV W S+I+G N ++ EA+ L +
Sbjct: 331 NGLVD---------KALEMFELFKEQTMEL--NVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 311 HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLG 370
+G+ + T S L AC N+ HG V + VGS LID+YA+ G
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGH--GRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 371 NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ + +F+ +P K++V W+ L+ G + HG +F ++ + + +S+L
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 431 VCSCLASLRRG-KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDV 488
C + G K + G + + ++++ + G++ + L K MP E D
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 489 VSWTGIIVGC 498
W ++ C
Sbjct: 558 CVWGALLNSC 567
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%)
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHG 401
Q H I+ SG + D + + LI Y+ A + +P + ++S LI TK
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 402 LNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLT 461
L + + +F M + + ++ ++ KVC+ L++ + GKQ+H G + +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 462 SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKP 521
S+ MY++CG + D +F M ++DVV+ + ++ + G +E + EM S ++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 522 NEITFLGVLSACRHAGLVEEAWTIFTSM 549
N +++ G+LS +G +EA +F +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 128/339 (37%), Gaps = 111/339 (32%)
Query: 13 CGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSW 72
C + + K GK +HC GL D F ++ MY + DA K+FD M+ K++V+
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 73 TTMVTAYTSNKRPNWAIRLYNHMLEYGSVE------------------------------ 102
+ ++ AY +R+ + M E +E
Sbjct: 186 SALLCAYARKGCLEEVVRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 103 -----PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL- 156
P+ S+VL + S L++GRLIH + ++ L D +++ ++DMY K G +
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 157 -TRKLFDQYSNWAA---SAYG--------------------------NVALWNSMLSG-- 184
LF+Q+ A +AY NV W S+++G
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 185 --GKQVHAFCVKR-----GFEKEDVTLTS------------------------------- 206
GK + A + R G + VT+ S
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 207 ----LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
LIDMY KCG I+ +FN MP +++V W ++ G
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 53/275 (19%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMY------------- 48
D + L G + G+ +H +IK GL +D + ++ MY
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 49 ------------ADFTSLN---------DAHKLFDEMARK-NIVSWTTMVTAYTSNKRPN 86
A T L+ + +LF E + N+VSWT+++ N +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 87 WAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTL 146
A+ L+ M + V+PN ++L AC L GR H R L + + + L
Sbjct: 371 EALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 147 LDMYVKCG--SLTRKLFDQYSNWAASAYGNVALWNSMLSG------GKQVHAF---CVKR 195
+DMY KCG +L++ +F+ N+ WNS+++G K+V + ++
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPT------KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 196 GFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPER 230
+ + ++ TSL+ + G D+G F M E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG ++ G+S H ++ L ++ G+ L+ MYA +N + +F+ M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG- 124
KN+V W +++ ++ + + + ++ ++ ++P+ ++++L AC G D G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 125 ----RLIHERITREKLEYDTVLMNTL 146
+ E + +LE+ + ++N L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLL 535
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 212/761 (27%), Positives = 354/761 (46%), Gaps = 123/761 (16%)
Query: 11 RHCGQRRSIKQGKSLHCRIIKYGL-SQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR-KN 68
R ++ + + +H +I GL S D F+G L+ Y+ F + +F ++ KN
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+ W +++ A++ N A+ Y + E V P+ + + +V+KAC+ D ++G L++
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLSG-- 184
E+I E D + N L+DMY + G LTR ++FD+ ++ WNS++SG
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM------PVRDLVSWNSLISGYS 183
Query: 185 ------------------------------------------GKQVHAFCVKRGFEKEDV 202
G+ +H F +K G V
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 203 TLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC-------------------F 243
L+ MYLK D +F+ M RD VS+ +I G F
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF 303
Query: 244 ECSCFTLSA-----------------------------------LVDMYSNCNVLCEARK 268
+ T+S+ L+D+Y+ C + AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 269 LFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
+F+ + WNS+ISGY+ + EA+ L + D T+ +
Sbjct: 364 VFNSMEC------KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 329 CINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVV 388
L + +F +H + SG +D V + LID+YA+ G V +L++F + D V
Sbjct: 418 STRLADL--KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 389 AWSGLIMGCTKHGLNSLAYLLFRDMINSN--QDVNQFIISSVLKVCSCLASLRRGKQVHA 446
W+ +I C + G + + M S D+ F+++ L +C+ LA+ R GK++H
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT--LPMCASLAAKRLGKEIHC 533
Query: 447 FCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKE 506
++ G+E E +LI+MY KCG +++ +F+ M RDVV+WTG+I G G ++
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 507 AIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMV 566
A+ F +M +S + P+ + F+ ++ AC H+GLV+E F MK Y ++P +EHY C+V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 567 DLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPS 626
DLL ++ AE+ I MP KPD +IWAS+L+AC T + + ++ +++ +P+DP
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 627 KYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKAGMSWIEV 666
++ SN YA L WD +S +RK+ K K K G SWIEV
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 199/509 (39%), Gaps = 121/509 (23%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
DL + LR CG R + K ++ ++K G + N L+ +YA + A +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ M K+ VSW ++++ Y + A++L+ M+ + + Y ++ + DL
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADL 424
Query: 122 DLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSM 181
G+ +H + + D + N L+DMY KCG + D +++ G+ WN++
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG----DSLKIFSSMGTGDTVTWNTV 480
Query: 182 LSG--------------------------------------------GKQVHAFCVKRGF 197
+S GK++H ++ G+
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
E E +LI+MY KCG +++ +F M RDVV+WTG+I
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI------------------ 582
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
+A YG + E+A+ + + SG+
Sbjct: 583 ------------------YAYGMYG----------------EGEKALETFADMEKSGIVP 608
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLI----VTSGYELDYIVG--SNLIDLYARLGN 371
DS F + + AC S L GL + + Y++D ++ + ++DL +R
Sbjct: 609 DSVVFIAIIYAC-------SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 372 VKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLK 430
+ A E +P K D W+ ++ C G A + R +I N D + I +
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILA--- 718
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
+ A+LR+ +V +++ + + IT
Sbjct: 719 -SNAYAALRKWDKVS--LIRKSLKDKHIT 744
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 420 VNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLAL 479
V+ IS L S L LRR +HA + G + D LID Y E L++
Sbjct: 5 VSSPFISRALSSSSNLNELRR---IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSV 61
Query: 480 FKFM-PERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGL 538
F+ + P ++V W II +NG EA+ ++ ++ +S++ P++ TF V+ AC AGL
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGL 119
Query: 539 VE-EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+ E + + G E L +VD+ + G A Q+ EMP + D W S+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSL 178
Query: 598 LKACETH 604
+ +H
Sbjct: 179 ISGYSSH 185
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 322/644 (50%), Gaps = 33/644 (5%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
++ + N ++S + ++ A LFD M + +V+WT ++ Y N + A +L+ M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 96 LEYGSVE-PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCG 154
S P+ ++ +L C+ + + +H KL +DT T+ ++ +K
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAV--KLGFDTNPFLTVSNVLLKSY 194
Query: 155 SLTRKLFDQYSNWAASAYGNVALWNSMLSG-------GKQVHAFCVKR--GFEKEDVTLT 205
R+L + + +N++++G + +H F R G + D T +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 206 SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCE 265
++ + GL F + +S + F + ++D YS + + E
Sbjct: 255 GVLKAVV-------GLHDFALGQQLHALS----VTTGFSRDASVGNQILDFYSKHDRVLE 303
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R LFD+ +Y N +IS Y +Q E ++ + G ++ F +
Sbjct: 304 TRMLFDEMPELDFVSY------NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 326 LKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKK 385
L NL + L L+ T+ L VG++L+D+YA+ + A +F LP++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILH--VGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 386 DVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVH 445
V+W+ LI G + GL+ LF M SN +Q ++VLK + ASL GKQ+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 446 AFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAK 505
AF ++ G + + + L+DMY KCG I D + +F+ MP+R+ VSW +I NG +
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 506 EAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCM 565
AI F +MI+S L+P+ ++ LGVL+AC H G VE+ F +M P YG+ P +HY CM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 566 VDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSP-ED 624
+DLLG+ G F +AE+L+ EMPF+PD+ +W+S+L AC H N L AE+L + D
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 625 PSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
+ YV +SN+YA G W+ + V+KA ++ G KK SW+EV+
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 211/508 (41%), Gaps = 106/508 (20%)
Query: 186 KQVHAFCVKRGFE-------------------------------KEDVTLTSLIDMYLKC 214
++V A +K GF+ K V+ ++I ++K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 215 GEIDDGLALFNFMPERDVVSWTGIIVG------------------CFECSC-----FTLS 251
G++ LF+ MP+R VV+WT I++G C SC T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWT-ILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 252 ALV---------------------------DMYSNCNVL----CEARKLFDQYSSWAASA 280
L+ + NVL CE R+L +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
+ +N++I+GY + E+I L + SG +TF+ LKA + L +F
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA--LG 269
Query: 341 LQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKH 400
Q+H L VT+G+ D VG+ ++D Y++ V LF +P+ D V+++ +I ++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 401 GLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITL 460
+ FR+M D F +++L + + L+SL+ G+Q+H + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 461 TSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLK 520
SL+DMY KC ++ +FK +P+R VSWT +I G Q G + F +M S L+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 521 PNEITFLGVLSACRH-----AGLVEEAWTIFTSMKPEYGLEPHLEHYYC---MVDLLGQA 572
++ TF VL A G A+ I + +LE+ + +VD+ +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSG---------NLENVFSGSGLVDMYAKC 500
Query: 573 GCFDDAEQLIAEMPFKPDKTIWASMLKA 600
G DA Q+ EMP + + W +++ A
Sbjct: 501 GSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/611 (22%), Positives = 220/611 (36%), Gaps = 147/611 (24%)
Query: 23 KSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTA---- 78
+ + RIIK G D N ++ ++ A K++DEM KN VS TM++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 79 ---------------------------YTSNKRPNWAIRLYNHMLEYGSVE-PNGFMYSA 110
Y N + A +L+ M S P+ ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 111 VLKACS-----------------LSGD--------------------LDLGRLIHERITR 133
+L C+ L D LDL ++ E I
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP- 211
Query: 134 EKLEYDTVLMNTLLDMYVKCGSLT---------RKLFDQYSNWAASAYGNVALWNSMLSG 184
E D+V NTL+ Y K G T R+ Q S++ S + +
Sbjct: 212 ---EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII----- 239
G+Q+HA V GF ++ ++D Y K + + LF+ MPE D VS+ +I
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 240 VGCFECS---------------------------------------CFTLSALVD----- 255
+E S C L A D
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 256 ------MYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
MY+ C + EA +F + W ++ISGYV + + L +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVS------WTALISGYVQKGLHGAGLKLFTK 442
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ S + D TF + LKA + + Q+H I+ SG + GS L+D+YA+
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASL--LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G++K A+++F +P ++ V+W+ LI +G A F MI S + I VL
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 430 KVCSCLASLRRGKQ-VHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERD 487
CS + +G + A G + ++D+ + G + L MP E D
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 488 VVSWTGIIVGC 498
+ W+ ++ C
Sbjct: 621 EIMWSSVLNAC 631
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 157/426 (36%), Gaps = 95/426 (22%)
Query: 22 GKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTS 81
G+ LH + G S+D GN +L Y+ + + LFDEM + VS+ ++++Y+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 82 NKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTV 141
+ ++ + M G + F ++ +L + L +GR +H + +
Sbjct: 329 ADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 142 LMNTLLDMYVKC-----GSLTRKLFDQYS--NWAASAYGNVA---------LWNSMLSG- 184
+ N+L+DMY KC L K Q + +W A G V L+ M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 185 -----------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGL 221
GKQ+HAF ++ G + + + L+DMY KCG I D +
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 222 ALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAY 281
+F MP+R+ VSW +I
Sbjct: 508 QVFEEMPDRNAVSWNALI------------------------------------------ 525
Query: 282 GNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFAL 341
S + N E AI + + SG+ DS + L AC + F +
Sbjct: 526 ----------SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH-CGFVEQGTE 574
Query: 342 QVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKH 400
+ G + ++DL R G A +L +P + D + WS ++ C H
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 401 GLNSLA 406
SLA
Sbjct: 635 KNQSLA 640
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S++ G+ LHC+ + + GN+L+ MYA +A +F + ++ VSWT +++
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
Y ++L+ M ++ + ++ VLKA + L LG+ +H I R
Sbjct: 426 GYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 138 YDTVLMNTLLDMYVKCGSLTR--KLFDQYSNWAASAYGNVALWNSMLS-------GGKQV 188
+ + L+DMY KCGS+ ++F++ + N WN+++S G +
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR------NAVSWNALISAHADNGDGEAAI 538
Query: 189 HAFC--VKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECS 246
AF ++ G + + V++ ++ CG ++ G F M GI +
Sbjct: 539 GAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS-----PIYGITPKKKHYA 593
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQ 272
C ++D+ EA KL D+
Sbjct: 594 C-----MLDLLGRNGRFAEAEKLMDE 614
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 193/662 (29%), Positives = 329/662 (49%), Gaps = 41/662 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
SI H +II +G DI L +D ++ A +F + R ++ + ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
++ N+ P+ ++ ++ H+ + ++PN Y+ + A S D GR+IH + + +
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ----VHAF 191
+ +L + ++ MY K + RK+FD+ + LWN+M+SG ++ V +
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPE------KDTILWNTMISGYRKNEMYVESI 205
Query: 192 CVKRGFEKEDVT---LTSLIDMYLKCGEIDD---GLALFNFMPERDVVSWTGIIVGCFEC 245
V R E T T+L+D+ E+ + G+ + + + GC+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK----------TGCYSH 255
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ L+ + +YS C + LF ++ ++ +N+MI GY N + E +++
Sbjct: 256 D-YVLTGFISLYSKCGKIKMGSALFREFRK------PDIVAYNAMIHGYTSNGETELSLS 308
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L + SG + S T S + +L+ +HG + S + V + L +
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVSGHLM-----LIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y++L ++SA +LF P+K + +W+ +I G T++GL A LFR+M S N I
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+ +L C+ L +L GK VH FE T+LI MY KCG I + LF M +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
++ V+W +I G G +G+ +EA+ F EM+ S + P +TFL VL AC HAGLV+E I
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
F SM YG EP ++HY CMVD+LG+AG A Q I M +P ++W ++L AC H
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWI 664
+T L ++E+L P++ +V+LSN+++ + + VR+ KK KA G + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 665 EV 666
E+
Sbjct: 664 EI 665
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 197/505 (39%), Gaps = 118/505 (23%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
R + G+ +H + + G ++ G+N++ MY F + DA K+FD M K+ + W TM+
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 77 TAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKL 136
+ Y N+ +I+++ ++ + +L A + +L LG IH T+
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 137 EYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYG--------------NVALWNS 180
++ + +Y KCG + LF ++ AY +++L+
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 181 -MLSGGK--------------------QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDD 219
MLSG + +H +C+K F T+L +Y K EI+
Sbjct: 313 LMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 220 GLALFNFMPERDVVSWTGIIVG------------------------------CFECSCFT 249
LF+ PE+ + SW +I G C +C
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 250 L-------------------------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNV 284
L +AL+ MY+ C + EAR+LFD + N
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK------KNE 486
Query: 285 ALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKAC--INLLN-----FNS 337
WN+MISGY L+ Q +EA+ + + +SG+ TF L AC L+ FNS
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 338 RFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL---PKKDVVAWSGLI 394
+I G+E + ++D+ R G+++ AL+ + P V W L+
Sbjct: 547 --------MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV--WETLL 596
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQD 419
C H +LA + + + D
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPD 621
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C Q ++ GK +H + I+ L+ MYA S+ +A +LFD M +KN
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG-RLIH 128
V+W TM++ Y + + A+ ++ ML G + P + VL ACS +G + G + +
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSG-ITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 129 ERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQV 188
I R E ++D+ + G L R L Q+ A S ++W ++L G ++
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRAL--QFIE-AMSIEPGSSVWETLL-GACRI 601
Query: 189 H 189
H
Sbjct: 602 H 602
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 308/593 (51%), Gaps = 40/593 (6%)
Query: 89 IRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLD 148
++ + M+E VE + + +L L LG+ +H + L+ + N+L++
Sbjct: 300 LKCFADMVE-SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 149 MYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG----GKQVHAFCV-----KRGF 197
MY K R +FD S ++ WNS+++G G +V A C+ + G
Sbjct: 359 MYCKLRKFGFARTVFDNMSE------RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 198 EKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMY 257
+ + T+TS++ + +GL+L V I + S F +AL+D Y
Sbjct: 413 KPDQYTMTSVLK---AASSLPEGLSL------SKQVHVHAIKINNVSDS-FVSTALIDAY 462
Query: 258 SNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI 317
S + EA LF++++ ++ WN+M++GY + + + L + +H G
Sbjct: 463 SRNRCMKEAEILFERHNF-------DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 318 DSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALE 377
D +T + K C L N QVH + SGY+LD V S ++D+Y + G++ +A
Sbjct: 516 DDFTLATVFKTCGFLFAINQ--GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 378 LFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS 437
F +P D VAW+ +I GC ++G A+ +F M ++F I+++ K SCL +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 438 LRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
L +G+Q+HA +K + TSL+DMY KCG IDD LFK + ++ +W ++VG
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
Q+G KE + F++M +KP+++TF+GVLSAC H+GLV EA+ SM +YG++P
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKP 753
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+EHY C+ D LG+AG AE LI M + +++ ++L AC +T+ +A +L
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKL 813
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDS--LSKVRKAGKKLGEKKAGMSWIEVSS 668
L P D S YV+LSN+YA WD L++ G K+ +K G SWIEV +
Sbjct: 814 LELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV-KKDPGFSWIEVKN 865
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 236/572 (41%), Gaps = 97/572 (16%)
Query: 105 GFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFD 162
GF+ +A+ S DL LG+ H RI + + L+N L+ MY KCGSLT R++FD
Sbjct: 44 GFLRNAIT-----SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD 98
Query: 163 QYSNWAASAYGNVALWNSMLSGGKQ----------------------------------- 187
+ + ++ WNS+L+ Q
Sbjct: 99 KMPD------RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 188 --------------VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVV 233
H + K G + ++ +L+++YLK G++ +G LF MP RDVV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 234 SWTGIIVGCFE----------CSCFTLSALVDMYSNCNVLCEARKLFD-----QYSSWA- 277
W ++ E S F S L +L AR D Q S+A
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL--ARISGDDSDAGQVKSFAN 270
Query: 278 ---ASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLN 334
AS+ + N +S Y+ + Q + + + S + D TF L + + +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 335 FNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLI 394
QVH + + G +L V ++LI++Y +L A +F + ++D+++W+ +I
Sbjct: 331 L--ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLAS-LRRGKQVHAFCVKRGF 453
G ++GL A LF ++ +Q+ ++SVLK S L L KQVH +K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPER---DVVSWTGIIVGCGQNGRAKEAIAY 510
+ T+LID Y + + + LF ER D+V+W ++ G Q+ + +
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT-SMKPEYGLEPHLEHYYCMVDLL 569
F M + + ++ T V C + + + ++K Y L+ + ++D+
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMY 562
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKAC 601
+ G A+ +P PD W +M+ C
Sbjct: 563 VKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 202/518 (38%), Gaps = 139/518 (26%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+ G+ +HC +K GL + N+L++MY A +FD M+ ++++SW +++
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKAC-SLSGDLDLGRLIHERITREKL 136
N A+ L+ +L G ++P+ + ++VLKA SL L L + +H +
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 137 EYDTVLMNTLLDMYV--KCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG---------- 184
D+ + L+D Y +C LF++++ ++ WN+M++G
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFERHN-------FDLVAWNAMMAGYTQSHDGHKT 501
Query: 185 ----------------------------------GKQVHAFCVKRGFEKEDVTLTSLIDM 210
GKQVHA+ +K G++ + + ++DM
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 211 YLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE-------------------------- 244
Y+KCG++ F+ +P D V+WT +I GC E
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 245 ------CSCFTL-----------------------SALVDMYSNCNVLCEARKLFDQYSS 275
SC T ++LVDMY+ C + +A LF +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 276 WAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN--LL 333
N+ WN+M+ G + + +E + L + S G+ D TF L AC + L+
Sbjct: 682 M------NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ + +HG G + + S L D R G VK A L + + +
Sbjct: 736 SEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
Query: 393 LIMGCTKHG-----------------LNSLAYLLFRDM 413
L+ C G L+S AY+L +M
Sbjct: 793 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ + CG +I QGK +H IK G D++ + +L MY ++ A FD +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+ V+WTTM++ N A +++ M G V P+ F + + KA S L+ GR
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGR 638
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGG 185
IH + D + +L+DMY KCGS+ D Y + N+ WN+ML G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSID----DAYCLFKRIEMMNITAWNAMLVGL 694
Query: 186 KQ 187
Q
Sbjct: 695 AQ 696
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 326/665 (49%), Gaps = 42/665 (6%)
Query: 18 SIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVT 77
S+K+ + + + K GL Q+ F L+S++ + S+++A ++F+ + K V + TM+
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 78 AYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLE 137
+ + A++ + M Y VEP + ++ +LK C +L +G+ IH + +
Sbjct: 109 GFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 138 YDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQ-------- 187
D M L +MY KC + RK+FD+ ++ WN++++G Q
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPER------DLVSWNTIVAGYSQNGMARMAL 221
Query: 188 --VHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFEC 245
V + C + + +T+ S++ I G + + S I
Sbjct: 222 EMVKSMC-EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS------ 274
Query: 246 SCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAIT 305
+ALVDMY+ C L AR+LFD NV WNSMI YV NE +EA+
Sbjct: 275 -----TALVDMYAKCGSLETARQLFD------GMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 306 LLSHIHSSGMCIDSYTFTSALKACINLLNFN-SRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G+ + AL AC +L + RF +H L V G + + V ++LI
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF---IHKLSVELGLDRNVSVVNSLIS 380
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
+Y + V +A +F +L + +V+W+ +I+G ++G A F M + + F
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP 484
SV+ + L+ K +H ++ +K T+L+DMY KCG I +F M
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 485 ERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWT 544
ER V +W +I G G +G K A+ F+EM + +KPN +TFL V+SAC H+GLVE
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 545 IFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH 604
F MK Y +E ++HY MVDLLG+AG ++A I +MP KP ++ +ML AC+ H
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
N AE+L +P+D +V+L+N+Y MW+ + +VR + + G K G S
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 664 IEVSS 668
+E+ +
Sbjct: 681 VEIKN 685
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 217/542 (40%), Gaps = 116/542 (21%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ CG ++ GK +H ++K G S D+F L +MYA +N+A K+FD M +++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW T+V Y+ N A+ + M E +++P+ +VL A S + +G+ IH
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
R + + L+DMY KCGSL R+LFD NV WNSM+
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD------GMLERNVVSWNSMIDAYVQ 314
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
G+ +H V+ G ++
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+ SLI MY KC E+D ++F + R +VSW +I+G
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG---------------------- 412
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ N + +A+ S + S + D++T+
Sbjct: 413 ------------------------------FAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 324 SALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP 383
S + A L + A +HG+++ S + + V + L+D+YA+ G + A +F +
Sbjct: 443 SVITAIAEL--SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 384 KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQ 443
++ V W+ +I G HG A LF +M N SV+ CS + G +
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 444 VHAFCVKRGFEKEDITLT-----SLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
C E I L+ +++D+ + G +++ MP + V+ G ++G
Sbjct: 561 ----CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 499 GQ 500
Q
Sbjct: 617 CQ 618
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 59/285 (20%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
IV L R I GK +H ++ G + L+ MYA SL A +LFD M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N+VSW +M+ AY N+ P A+ ++ ML+ G V+P L AC+ GDL+ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSVMGALHACADLGDLERGR 357
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYG-----NVALWNS 180
IH+ L+ + ++N+L+ MY KC + + AAS +G + WN+
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEV---------DTAASMFGKLQSRTLVSWNA 408
Query: 181 MLSG--------------------------------------------GKQVHAFCVKRG 196
M+ G K +H ++
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 197 FEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
+K T+L+DMY KCG I +F+ M ER V +W +I G
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 407 YLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDM 466
+L R+ I +N V + + +L+ CS L LR Q+ K G +E T L+ +
Sbjct: 24 FLSERNYIPAN--VYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSL 78
Query: 467 YLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+ + G +D+ +F+ + + V + ++ G + +A+ +F M ++P F
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 527 LGVLSAC 533
+L C
Sbjct: 139 TYLLKVC 145
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 303 bits (775), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 200/697 (28%), Positives = 355/697 (50%), Gaps = 77/697 (11%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGL---SQDIFTGNNLLSMYADFTSLNDAHKLFD 62
+VE R C +K+ + +H ++ G ++ + NNL+SMY SL A K+FD
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFD 156
Query: 63 EMARKNIVSWTTMVTAYTSNKR-PNWAIRLYNHM-LEYGSVEPNGFMYSAVLKACSLSGD 120
+M +N+VS+ + +AY+ N ++A L HM EY V+PN ++++++ C++ D
Sbjct: 157 KMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY--VKPNSSTFTSLVQVCAVLED 214
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALW 178
+ +G ++ +I + + V+ ++L MY CG L R++FD +N A A W
Sbjct: 215 VLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA------W 268
Query: 179 NSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN--FMPERDVVSWT 236
N+M+ G LK +I+DGL F M D +T
Sbjct: 269 NTMIVGS--------------------------LKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 237 GIIV--GCFECSCFTL--------------------SALVDMYSNCNVLCEARKLFDQYS 274
IV GC + ++L +AL+DMY +C + EA +F +
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 275 SWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINLL 333
+ N+ WNS+ISG N E+A+ + + S D YTF++A+ A
Sbjct: 363 N------PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGL 393
F +HG + GYE VG+ L+ +Y + +SA ++F + ++DVV W+ +
Sbjct: 417 RF--VHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 394 IMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGF 453
I+G ++ G + LA F +M + F +SSV+ CS +A LR+G+ H ++ GF
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQE 513
+ +L+DMY K G+ + +F D+ W ++ Q+G ++A+++F++
Sbjct: 535 DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594
Query: 514 MIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAG 573
++++ P+ +T+L +L+AC H G + ++ MK E G++ +HY CMV+L+ +AG
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAG 653
Query: 574 CFDDAEQLIAEMPFKPDKT-IWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLS 632
D+A +LI + P ++ +W ++L AC N ++ AEQ+L PED + +++LS
Sbjct: 654 LVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713
Query: 633 NVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVSS 668
N+YA G W+ ++++R+ + L K G+SWIEV++
Sbjct: 714 NLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNN 750
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 270/487 (55%), Gaps = 26/487 (5%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
G+Q+H +K G + + TSLI MY++ G ++D +F+ P RDVVS+T +I G
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG--- 209
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
Y++ + A+KLFD+ +V WN+MISGY +EA+
Sbjct: 210 ------------YASRGYIENAQKLFDEI------PVKDVVSWNAMISGYAETGNYKEAL 251
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
L + + + D T + + AC + + QVH I G+ + + + LID
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQ--SGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 365 LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI 424
LY++ G +++A LF RLP KDV++W+ LI G T L A LLF++M+ S + N
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 425 ISSVLKVCSCLASLRRGKQVHAFCVKR--GFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ S+L C+ L ++ G+ +H + KR G TSLIDMY KCG+I+ +F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
+ + + SW +I G +GRA + F M + ++P++ITF+G+LSAC H+G+++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 543 WTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACE 602
IF +M +Y + P LEHY CM+DLLG +G F +AE++I M +PD IW S+LKAC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 603 THNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGM 661
H N +L AE L+ PE+P YV+LSN+YA+ G W+ ++K R G KK G
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 662 SWIEVSS 668
S IE+ S
Sbjct: 610 SSIEIDS 616
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 33/289 (11%)
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQ 342
N+ +WN+M G+ L+ A+ L + S G+ +SYTF LK+C F Q
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE--GQQ 155
Query: 343 VHGLIVTSGYELDYIVGSNLIDL-------------------------------YARLGN 371
+HG ++ G +LD V ++LI + YA G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 372 VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKV 431
+++A +LF +P KDVV+W+ +I G + G A LF+DM+ +N ++ + +V+
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ S+ G+QVH + GF + +LID+Y KCGE++ LF+ +P +DV+SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE 540
+I G KEA+ FQEM++S PN++T L +L AC H G ++
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 188/441 (42%), Gaps = 78/441 (17%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAH----------- 58
L+ C + ++ K+G+ +H ++K G D++ +L+SMY L DAH
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 59 --------------------KLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
KLFDE+ K++VSW M++ Y A+ L+ M++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK- 259
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
+V P+ V+ AC+ SG ++LGR +H I + ++N L+D+Y KCG L
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 159 K--LFDQYSNWAASAYGNVALWNSMLSGGKQVHAF---------CVKRGFEKEDVTLTSL 207
LF++ Y +V WN+++ G ++ + ++ G DVT+ S+
Sbjct: 320 ACGLFERL------PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+ G ID G + ++ +R + G S S L+DMY+ C + A
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKR--------LKGVTNASSLRTS-LIDMYAKCGDIEAAH 424
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
++F+ + + +++ WN+MI G+ ++ + + + L S + G+ D TF L
Sbjct: 425 QVFN------SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL------IDLYARLGNVK-SALELFH 380
AC S + G + DY + L IDL G K + +
Sbjct: 479 AC-------SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 381 RLPKKDVVAWSGLIMGCTKHG 401
+ D V W L+ C HG
Sbjct: 532 MEMEPDGVIWCSLLKACKMHG 552
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/582 (20%), Positives = 223/582 (38%), Gaps = 141/582 (24%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLS---MYADFTSLNDAHKLFDEMARKNIVSWT 73
++++ + +H ++IK GL + + L+ + F L A +F + N++ W
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 74 TMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITR 133
TM + + P A++LY M+ G + PN + + VLK+C+ S G+ IH + +
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 134 EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSN------------WAASAY------- 172
+ D + +L+ MYV+ G L K+FD+ + +A+ Y
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 173 ------GNVALWNSMLSG------------------------------------------ 184
+V WN+M+SG
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 185 --GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGC 242
G+QVH + GF + +LID+Y KCGE++ LF +P +DV+SW +I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG- 341
Query: 243 FECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
Y++ N+ +E
Sbjct: 342 --------------YTHMNLY-------------------------------------KE 350
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
A+ L + SG + T S L AC +L + + V+ G + ++L
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
ID+YA+ G++++A ++F+ + K + +W+ +I G HG ++ LF M +
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+L CS L G+ + +D +T ++ Y ++ LFK
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMT------QDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 483 MPER--------DVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
E D V W ++ C +G + ++ + +I+
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 343 VHGLIVTSGYELDYIVGSNLID---LYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
+H ++ G S LI+ L + A+ +F + + +++ W+ + G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG--- 108
Query: 400 HGLNS---LAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
H L+S A L+ MI+ N + VLK C+ + + G+Q+H +K G + +
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVV--------------------------- 489
TSLI MY++ G ++D +F P RDVV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 490 ----SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
SW +I G + G KEA+ F++M+++ ++P+E T + V+SAC +G +E +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHN 605
+ ++G +L+ ++DL + G + A L +P+K D W +++ TH
Sbjct: 289 HLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG-YTHM 345
Query: 606 NTKLVSIIAEQLLATSPEDPSKYVMLS 632
N +++ Q + S E P+ MLS
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLS 372
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 2 DLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLF 61
D +V + C Q SI+ G+ +H I +G ++ N L+ +Y+ L A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 62 DEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDL 121
+ + K+++SW T++ YT A+ L+ ML G PN ++L AC+ G +
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAI 383
Query: 122 DLGRLIHERITR--EKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
D+GR IH I + + + + L +L+DMY KCG + ++F+ + + S+
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS------ 437
Query: 178 WNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMP 228
WN+M+ G G+ +F + K G + +D+T L+ G +D G +F M
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 229 E 229
+
Sbjct: 498 Q 498
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 246/421 (58%), Gaps = 14/421 (3%)
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F ++ L++MY N+L +A +LFDQ NV W +MIS Y + +++A+ LL
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQ------RNVISWTTMISAYSKCKIHQKALELL 150
Query: 308 SHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYA 367
+ + + YT++S L++C + + +H I+ G E D V S LID++A
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVR-----MLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 368 RLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISS 427
+LG + AL +F + D + W+ +I G ++ + +A LF+ M + Q ++S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERD 487
VL+ C+ LA L G Q H VK ++++ I +L+DMY KCG ++D L +F M ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 488 VVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFT 547
V++W+ +I G QNG ++EA+ F+ M S KPN IT +GVL AC HAGL+E+ W F
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 548 SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNT 607
SMK YG++P EHY CM+DLLG+AG DDA +L+ EM +PD W ++L AC N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 608 KLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
L A++++A PED Y +LSN+YA WDS+ ++R + G +K+ G SWIEV
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 667 S 667
+
Sbjct: 504 N 504
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 142/277 (51%), Gaps = 52/277 (18%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKY-GLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
E ++ C R++ +G +L CR + + G +F N L++MY F LNDAH+LFD+M +
Sbjct: 66 ELIKCCISNRAVHEG-NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL 126
+N++SWTTM++AY+ K A+ L ML +V PN + YS+VL++C+ D+ R+
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDV---RM 180
Query: 127 IHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGK 186
+H I +E LE D + + L+D++ K G D S + G+ +WNS++ G
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPE----DALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 187 Q-----VHAFCVKR----GFEKEDVTLTS------------------------------- 206
Q V KR GF E TLTS
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 207 --LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L+DMY KCG ++D L +FN M ERDV++W+ +I G
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
S ++K C ++ G + G + LI+MY+K ++D LF MP+
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR--------HAG 537
R+V+SWT +I + ++A+ M++ ++PN T+ VL +C H G
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCG 184
Query: 538 LVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASM 597
+++E GLE + ++D+ + G +DA + EM D +W S+
Sbjct: 185 IIKE------------GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSI 231
Query: 598 LK----------ACETHNNTKLVSIIAEQLLATS 621
+ A E K IAEQ TS
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 306/570 (53%), Gaps = 35/570 (6%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYS-- 165
++L+ C+ G D G +H + + + + N L+DMY KC + K+FD
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 166 ---NWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLA 222
+W+A G+V N L G + + ++G + T ++ + ++ GL
Sbjct: 71 NVVSWSALMSGHV--LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 223 LFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
+ F + +G FE ++LVDMYS C + EA K+F + + +
Sbjct: 129 IHGFC----------LKIG-FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS-- 175
Query: 283 NVALWNSMISGYVLNEQNEEAITLLSHIHSSGMC--IDSYTFTSALKACINLLNFNSRFA 340
WN+MI+G+V +A+ + + + D +T TS LKAC + +
Sbjct: 176 ----WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA--G 229
Query: 341 LQVHGLIVTSGYELD---YIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
Q+HG +V SG+ I GS L+DLY + G + SA + F ++ +K +++WS LI+G
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+ G A LF+ + N ++ F +SS++ V + A LR+GKQ+ A VK E
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
L S++DMYLKCG +D+ F M +DV+SWT +I G G++G K+++ F EM++
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 518 RLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDD 577
++P+E+ +L VLSAC H+G+++E +F+ + +G++P +EHY C+VDLLG+AG +
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 578 AEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYAT 637
A+ LI MP KP+ IW ++L C H + +L + + LL ++P+ YVM+SN+Y
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Query: 638 LGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
G W+ R+ G G +K+AGMSW+E+
Sbjct: 529 AGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 235/545 (43%), Gaps = 101/545 (18%)
Query: 4 RRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDE 63
+ +V LR C ++ QG +HC ++K G ++ T N L+ MY A+K+FD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M +N+VSW+ +++ + N ++ L++ M G + PN F +S LKAC L L+
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEK 125
Query: 124 GRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT------RKLFDQ--------YSNWAA 169
G IH + E + N+L+DMY KCG + R++ D+ + +
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 170 SAYGNVAL----------------------------WNSMLSGGKQVHAFCVKRGFE-KE 200
+ YG+ AL M+ GKQ+H F V+ GF
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 201 DVTLT-SLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSN 259
T+T SL+D+Y+KCG + F+ + E+ ++SW+ +I+G Y+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG---------------YAQ 290
Query: 260 CNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDS 319
EA LF + L E N + IDS
Sbjct: 291 EGEFVEAMGLFKR-----------------------LQELNSQ--------------IDS 313
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
+ +S + + +Q + + SG E + ++++D+Y + G V A + F
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCF 371
Query: 380 HRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLR 439
+ KDV++W+ +I G KHGL + +F +M+ N + ++ +VL CS ++
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 440 RGKQVHAFCVK-RGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVG 497
G+++ + ++ G + ++D+ + G + + L MP + +V W ++
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 498 CGQNG 502
C +G
Sbjct: 492 CRVHG 496
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 203/704 (28%), Positives = 330/704 (46%), Gaps = 88/704 (12%)
Query: 36 QDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHM 95
+D+++ N L+ L +A ++FD M +++VSW M++ A+ +Y M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 96 LEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS 155
+ G + P+ F ++VL ACS D G H + L+ + + N LL MY KCG
Sbjct: 130 VCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 156 LTR---KLFDQYSNWAASAY----GNVALWNSMLSG------------------------ 184
+ ++F+ S +Y G +A N +L
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 185 -------------------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFN 225
GKQ+H ++ GF + SL+++Y K +++ +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 226 FMPERDVVSWTGIIVG--------------------CFECSCFTLSALVDMYSNCNVLCE 265
MPE +VVSW +IVG F+ + T +++ +
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 266 ARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSA 325
R++F + SA WN+M+SGY E EEAI+ + + D T +
Sbjct: 369 GRRIFSSIPQPSVSA------WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 326 LKACINLLNFNSRF---ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR- 381
L +C L RF Q+HG+++ + + + S LI +Y+ ++ + +F
Sbjct: 423 LSSCARL-----RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 477
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV-NQFIISSVLKVCSCLASLRR 440
+ + D+ W+ +I G + L++ A +LFR M + N+ ++VL CS L SL
Sbjct: 478 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 537
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
G+Q H VK G+ + T+L DMY KCGEID F + ++ V W +I G G
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
NGR EA+ +++MI S KP+ ITF+ VL+AC H+GLVE I +SM+ +G+EP L+
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 657
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
HY C+VD LG+AG +DAE+L P+K +W +L +C H + L +AE+L+
Sbjct: 658 HYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL 717
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRK-AGKKLGEKKAGMSW 663
P+ + YV+LSN Y++L WD + ++ K K G SW
Sbjct: 718 DPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 205/430 (47%), Gaps = 41/430 (9%)
Query: 185 GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE 244
GK +H F V+ G + + L+D+Y++CG+ D +F+ M RDV SW + F
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT--FR 82
Query: 245 CSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAI 304
C L EA ++FD +V WN+MIS V E+A+
Sbjct: 83 CKVGDLG-------------EACEVFDGMPER------DVVSWNNMISVLVRKGFEEKAL 123
Query: 305 TLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLID 364
+ + G +T S L AC +L+ F ++ HG+ V +G + + VG+ L+
Sbjct: 124 VVYKRMVCDGFLPSRFTLASVLSACSKVLD--GVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 365 LYARLGN-VKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
+YA+ G V + +F L + + V+++ +I G + A +FR M V+
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 424 IISSVLKV------CSCLASL---RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEID 474
+S++L + C L+ + GKQ+H ++ GF + SL+++Y K +++
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 475 DGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACR 534
+F MPE +VVSW +IVG GQ R+ +++ + M S +PNE+T + VL AC
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF 361
Query: 535 HAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPF---KPDK 591
+G VE IF+S+ +P + + M+ +++A +M F KPDK
Sbjct: 362 RSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDK 416
Query: 592 TIWASMLKAC 601
T + +L +C
Sbjct: 417 TTLSVILSSC 426
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L C + S+ G+ H ++K G D F L MY ++ A + FD + RKN
Sbjct: 526 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 585
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
V W M+ Y N R + A+ LY M+ G +P+G + +VL ACS SG ++ G I
Sbjct: 586 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 130 RITR 133
+ R
Sbjct: 645 SMQR 648
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 204/748 (27%), Positives = 352/748 (47%), Gaps = 105/748 (14%)
Query: 15 QRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTT 74
+ S + G +HC +IK+GL +++ NNLLS+Y + +A KLFDEM+ + + +WT
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
M++A+T ++ A+ L+ M+ G+ PN F +S+V+++C+ D+ G +H + +
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGT-HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 135 KLEYDTVLMNTLLDMYVKCGSLTR--KLFDQYSN-----WA---ASAYGN------VALW 178
E ++V+ ++L D+Y KCG +LF N W +S G + +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 179 NSMLSGG-----------------------KQVHAFCVKRGFEKEDVTLTSLIDMYLKCG 215
+ M+ G K +H+ + RG V TSL+D Y +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 216 EIDDGLALFNFMPERDVVSWTGII------------VGCF--------ECSCFTLSA--- 252
+++D + + N E+DV WT ++ VG F + + FT SA
Sbjct: 274 KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 253 --------------------------------LVDMYSNCNVL-CEARKLFDQYSSWAAS 279
LVDMY C+ EA ++F A
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF------GAM 387
Query: 280 AYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRF 339
NV W ++I G V + ++ LL + + + T + L+AC L + R
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV--RR 445
Query: 340 ALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTK 399
L++H ++ + + +VG++L+D YA V A + + ++D + ++ L+ +
Sbjct: 446 VLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNE 505
Query: 400 HGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDIT 459
G + +A + M ++Q + + + L +L GK +H + VK GF
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASV 565
Query: 460 LTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRL 519
L SL+DMY KCG ++D +F+ + DVVSW G++ G NG A++ F+EM
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 520 KPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAE 579
+P+ +TFL +LSAC + L + F MK Y +EP +EHY +V +LG+AG ++A
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 580 QLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLG 639
++ M KP+ I+ ++L+AC N L +A + LA +P DP+ Y++L+++Y G
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESG 745
Query: 640 MWDSLSKVRK-AGKKLGEKKAGMSWIEV 666
+ K R +K KK G S +EV
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTVEV 773
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 7/276 (2%)
Query: 327 KACINLLNF----NSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
K+CI +L+F +SR L +H ++ G + + +NL+ LY + + +A +LF +
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 383 PKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGK 442
+ V AW+ +I TK + A LF +M+ S N+F SSV++ C+ L + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 443 QVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNG 502
+VH +K GFE + +SL D+Y KCG+ + LF + D +SWT +I
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 503 RAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHY 562
+ +EA+ ++ EM+++ + PNE TF+ +L A GL E TI +++ G+ ++
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLK 262
Query: 563 YCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
+VD Q +DA +++ + D +W S++
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVV 297
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/656 (29%), Positives = 314/656 (47%), Gaps = 109/656 (16%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR--KLFDQY--- 164
+VL+ C+ S L G+ + I D+ L + L MY CG L ++FD+
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 165 ---------SNWAASA--YGNVALWNSMLS------------------------GGKQVH 189
+ A S G++ L+ M+S GG+Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 190 AFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGII---------- 239
F +K GF + + SL+ YLK +D +F+ M ERDV+SW II
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 240 -------------------------VGCFEC---------------SCFT-----LSALV 254
GC + +CF+ + L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
DMYS C L A+ +F + S + +Y SMI+GY EA+ L + G
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSY------TSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 315 MCIDSYTFTSALKACIN--LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNV 372
+ D YT T+ L C LL+ R VH I + D V + L+D+YA+ G++
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKR----VHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 373 KSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQ-DVNQFIISSVLKV 431
+ A +F + KD+++W+ +I G +K+ + A LF ++ + ++ ++ VL
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 432 CSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSW 491
C+ L++ +G+++H + ++ G+ + SL+DMY KCG + LF + +D+VSW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 492 TGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKP 551
T +I G G +G KEAIA F +M Q+ ++ +EI+F+ +L AC H+GLV+E W F M+
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 552 EYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVS 611
E +EP +EHY C+VD+L + G A + I MP PD TIW ++L C H++ KL
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 612 IIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKA-GKKLGEKKAGMSWIEV 666
+AE++ PE+ YV+++N+YA W+ + ++RK G++ K G SWIE+
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%)
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
++ D++ + SVL++C+ SL+ GK+V F GF + + L MY CG++
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDL 145
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITF 526
+ +F + + W ++ ++G +I F++M+ S ++ + TF
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 295/578 (51%), Gaps = 50/578 (8%)
Query: 110 AVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNW 167
A+L S + L+ + +H ++ E + VL ++L + Y++ L F++ W
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 168 AASAYGNVALWNSMLSGGKQVHAFC----------VKRGFEKED-VTLTSLIDMYLKCGE 216
+ + WN++LSG + C ++R + D L I + G
Sbjct: 69 KRNRHS----WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 217 IDDG-----LALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
+++G LA+ N + + D V+ +LV+MY+ + A+K+FD
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVA----------------PSLVEMYAQLGTMESAQKVFD 168
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
+ N LW ++ GY+ ++ E L + +G+ +D+ T +KAC N
Sbjct: 169 EI------PVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 332 LLNFNSRFALQVHGLIVTSGY--ELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVA 389
+ F + VHG+ + + + DY+ S +ID+Y + + +A +LF ++VV
Sbjct: 223 V--FAGKVGKCVHGVSIRRSFIDQSDYLQAS-IIDMYVKCRLLDNARKLFETSVDRNVVM 279
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G K A+ LFR M+ + NQ ++++L CS L SLR GK VH + +
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIA 509
+ G E + + TS IDMY +CG I +F MPER+V+SW+ +I G NG +EA+
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 510 YFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLL 569
F +M + PN +TF+ +LSAC H+G V+E W F SM +YG+ P EHY CMVDLL
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Query: 570 GQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYV 629
G+AG +A+ I MP KP + W ++L AC H L IAE+LL+ PE S YV
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYV 519
Query: 630 MLSNVYATLGMWDSLSKV-RKAGKKLGEKKAGMSWIEV 666
+LSN+YA GMW+ ++ V RK G K K G S EV
Sbjct: 520 LLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 176/454 (38%), Gaps = 108/454 (23%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V A++ C ++ G +H +K GL +D + +L+ MYA ++ A K+
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FDE+ +N V W ++ Y + RL+ M + G + + ++KAC
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG-LALDALTLICLVKACGNVFA 225
Query: 121 LDLGRLIHE-RITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
+G+ +H I R ++ L +++DMYVKC L RKLF+ S NV +
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE------TSVDRNVVM 279
Query: 178 WNSMLSG--------------------------------------------GKQVHAFCV 193
W +++SG GK VH + +
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 194 KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSAL 253
+ G E + V TS IDMY +CG I +F+ MPER+V+SW+ +I
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI-------------- 385
Query: 254 VDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSS 313
+A+G +N EEA+ + S
Sbjct: 386 -------------------------NAFG-------------INGLFEEALDCFHKMKSQ 407
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
+ +S TF S L AC + N + Q + G + + ++DL R G +
Sbjct: 408 NVVPNSVTFVSLLSACSHSGNVKEGWK-QFESMTRDYGVVPEEEHYACMVDLLGRAGEIG 466
Query: 374 SALELFHRLPKKDVV-AWSGLIMGCTKHGLNSLA 406
A +P K + AW L+ C H LA
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIHKEVDLA 500
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 227/770 (29%), Positives = 349/770 (45%), Gaps = 120/770 (15%)
Query: 6 IVEALRHCGQRRSIKQ--GKSLHCRIIKYGLSQDIFTGNNLLSMYAD-FTSLNDAHKLFD 62
V LR C + S+ G+ +H + K + D N L+SMY S+ A F
Sbjct: 105 FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 63 EMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMY-SAVLKACSLS-GD 120
++ KN VSW ++++ Y+ A R+++ M +Y P + + S V ACSL+ D
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPD 223
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKLFDQY-------------- 164
+ L I I + L D + + L+ + K GSL+ RK+F+Q
Sbjct: 224 VRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG 283
Query: 165 ---SNWAASAYGNVALWNSM-------------------------LSGGKQVHAFCVKRG 196
W A NSM L G++VH + G
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 197 FEKEDVTL-TSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC-------- 247
V + L++MY KCG I D +F FM ++D VSW +I G + C
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 248 ------------FTL-----------------------------------SALVDMYSNC 260
FTL +AL+ +Y+
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 261 NVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN-EEAITLLSHIHSSGMCIDS 319
L E RK+F + + V+ WNS+I +E++ EA+ + +G ++
Sbjct: 464 GYLNECRKIFS-----SMPEHDQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 320 YTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELF 379
TF+S L A Q+HGL + + + + LI Y + G + ++F
Sbjct: 518 ITFSSVLSA--VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF 575
Query: 380 HRLP-KKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASL 438
R+ ++D V W+ +I G + L + A L M+ + Q ++ F+ ++VL + +A+L
Sbjct: 576 SRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 635
Query: 439 RRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGC 498
RG +VHA V+ E + + ++L+DMY KCG +D L F MP R+ SW +I G
Sbjct: 636 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 499 GQNGRAKEAIAYFQEM-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
++G+ +EA+ F+ M + + P+ +TF+GVLSAC HAGL+EE + F SM YGL P
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 755
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTK--LVSIIAE 615
+EH+ CM D+LG+AG D E I +MP KP+ IW ++L AC N K L AE
Sbjct: 756 RIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAE 815
Query: 616 QLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWI 664
L PE+ YV+L N+YA G W+ L K RK K KK AG SW+
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 273/597 (45%), Gaps = 51/597 (8%)
Query: 25 LHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYTSNKR 84
H R+ K L +D++ NNL++ Y + A K+FDEM +N VSW +V+ Y+ N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 85 PNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL--GRLIHERITREKLEYDTVL 142
A+ M++ G + N + + +VL+AC G + + GR IH + + D V+
Sbjct: 83 HKEALVFLRDMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 143 MNTLLDMYVKC-GSLTRKLFDQYSNWAASAYGNVAL-----WNSMLS----GGKQVHAFC 192
N L+ MY KC GS+ +A A+G++ + WNS++S G Q AF
Sbjct: 142 SNVLISMYWKCIGSV---------GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 193 V-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSC 247
+ G + T SL+ E D L L M + +G++
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL-LEQIMC---TIQKSGLLT-----DL 243
Query: 248 FTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLL 307
F S LV ++ L ARK+F+Q + N N ++ G V + EEA L
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETR------NAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 308 SHIHSS-GMCIDSYT-FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVG--SNLI 363
++S + +SY S+ + +VHG ++T+G +D++VG + L+
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLV 356
Query: 364 DLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQF 423
++YA+ G++ A +F+ + KD V+W+ +I G ++G A ++ M + F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFM 483
+ S L C+ L + G+Q+H +K G + +L+ +Y + G +++ +F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 484 PERDVVSWTGIIVGCGQNGRA-KEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEA 542
PE D VSW II ++ R+ EA+ F ++ K N ITF VLSA E
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 543 WTIFT-SMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASML 598
I ++K E E+ ++ G+ G D E++ + M + D W SM+
Sbjct: 537 KQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 431 VCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVS 490
V SC+ + H+ K +K+ +LI+ YL+ G+ +F MP R+ VS
Sbjct: 10 VQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVS 69
Query: 491 WTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLV 539
W I+ G +NG KEA+ + ++M++ + N+ F+ VL AC+ G V
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 201/709 (28%), Positives = 332/709 (46%), Gaps = 85/709 (11%)
Query: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKN--IVSWTT 74
++I Q K +H +++ +G+ T ++L+S Y L+ A L + + W +
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLT-SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 75 MVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITRE 134
++ +Y N N + L+ ++ S P+ + + V KAC + G H
Sbjct: 98 LIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 135 KLEYDTVLMNTLLDMYVKCGSLT--RKLFDQYSNWAASAYGNVALWNSML---------- 182
+ + N L+ MY +C SL+ RK+FD+ S W +V WNS++
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW------DVVSWNSIIESYAKLGKPK 210
Query: 183 -----------------------------------SGGKQVHAFCVKRGFEKEDVTLTSL 207
S GKQ+H F V + L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEAR 267
+DMY KCG +D+ +F+ M +DVVSW ++ G YS +A
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG---------------YSQIGRFEDAV 315
Query: 268 KLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALK 327
+LF++ +V W++ ISGY EA+ + + SSG+ + T S L
Sbjct: 316 RLFEKMQEEKIKM--DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 328 ACINLLNFNSRFALQVHGL-----IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL 382
C ++ + + + + +G+ + +V + LID+YA+ V +A +F L
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 383 -PK-KDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDV--NQFIISSVLKVCSCLASL 438
PK +DVV W+ +I G ++HG + A L +M + N F IS L C+ LA+L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 439 RRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVG 497
R GKQ+HA+ ++ + +++ LIDMY KCG I D +F M ++ V+WT ++ G
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 498 CGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEP 557
G +G +EA+ F EM + K + +T L VL AC H+G++++ F MK +G+ P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 558 HLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
EHY C+VDLLG+AG + A +LI EMP +P +W + L C H +L AE++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 618 LATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
+ Y +LSN+YA G W ++++R + G +K+ G SW+E
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 241/545 (44%), Gaps = 63/545 (11%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
+ CG+ S++ G+S H + G ++F GN L++MY+ SL+DA K+FDEM+ ++
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHE 129
VSW +++ +Y +P A+ +++ M P+ VL C+ G LG+ +H
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 130 RITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSGGKQVH 189
++ + + N L+DMY KCG + + +SN + +V WN+M++G Q+
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCG-MMDEANTVFSNMSVK---DVVSWNAMVAGYSQIG 309
Query: 190 AF-CVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV----VSWT 236
F R FEK + VT ++ I Y + G + L + M + V+
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 237 GIIVGCF---------ECSCF------------------TLSALVDMYSNCNVLCEARKL 269
++ GC E C+ ++ L+DMY+ C + AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 270 FDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCI--DSYTFTSALK 327
FD S +V W MI GY + +A+ LLS + +++T + AL
Sbjct: 430 FDSLSPKER----DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 328 ACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN-LIDLYARLGNVKSALELFHRLPKKD 386
AC +L R Q+H + + + SN LID+YA+ G++ A +F + K+
Sbjct: 486 ACASLAAL--RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 387 VVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG----- 441
V W+ L+ G HG A +F +M ++ + VL CS + +G
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 442 KQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQ 500
+ F V G E L+D+ + G ++ L L + MP E V W + C
Sbjct: 604 RMKTVFGVSPGPEH----YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 501 NGRAK 505
+G+ +
Sbjct: 660 HGKVE 664
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 177/491 (36%), Gaps = 156/491 (31%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L C + GK LHC + + Q++F GN L+ MYA +++A+ +F M+
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE---------------------------- 97
K++VSW MV Y+ R A+RL+ M E
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 98 ------YGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEY-------DTVLMN 144
++PN +VL C+ G L G+ IH + ++ + +++N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 145 TLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG------------------ 184
L+DMY KC + R +FD S +V W M+ G
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLS----PKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 185 ----------------------------GKQVHAFCVKRGFEKEDVTL---TSLIDMYLK 213
GKQ+HA+ ++ ++ V L LIDMY K
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAK 525
Query: 214 CGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
CG I D +F+ M ++ V+WT ++ G
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTG-------------------------------- 553
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN-- 331
YG + GY EEA+ + + G +D T L AC +
Sbjct: 554 -------YG--------MHGY-----GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAW 390
+++ + ++ + S Y + L+DL R G + +AL L +P + V W
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHY---ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 391 SGLIMGCTKHG 401
+ C HG
Sbjct: 651 VAFLSCCRIHG 661
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKY-------GLSQDIFTGNNLLSMYADFTSLNDAH 58
++ L C ++ GK +HC IKY G + N L+ MYA ++ A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 59 KLFDEMARK--NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYG-SVEPNGFMYSAVLKAC 115
+FD ++ K ++V+WT M+ Y+ + N A+ L + M E PN F S L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLM-NTLLDMYVKCGSLT--RKLFDQYSNWAASAY 172
+ L +G+ IH R + + + N L+DMY KCGS++ R +FD N A
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD---NMMAK-- 542
Query: 173 GNVALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
N W S+++G G A + + GF+ + VTL ++ G ID G+
Sbjct: 543 -NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 224 FNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGN 283
FN M + G+ G +C LVD+ L A +L ++
Sbjct: 602 FNRMK-----TVFGVSPGPEHYAC-----LVDLLGRAGRLNAALRLIEEMPMEPPPVVWV 651
Query: 284 VALWNSMISGYV-LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKA 328
L I G V L E E IT L+ H SYT S L A
Sbjct: 652 AFLSCCRIHGKVELGEYAAEKITELASNHDG-----SYTLLSNLYA 692
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 292 bits (748), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 351/678 (51%), Gaps = 41/678 (6%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLND------AHKLFDE 63
L+ C + +++K GK++HC +I+ + N+L++MY + D K+FD
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 64 MARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDL 123
M RKN+V+W T+++ Y R A R + M+ V+P+ + V A S+S +
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISRSIKK 232
Query: 124 GRLIHERITREKLEY--DTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWN 179
+ + + + EY D ++++ + MY + G + +R++FD + N+ +WN
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD------SCVERNIEVWN 286
Query: 180 SMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDV---VSWT 236
+M+ G V C+ E ++ L ++ + E+ LA + V +
Sbjct: 287 TMI--GVYVQNDCL---VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 237 GIIVGCF-ECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYV 295
G + F E +++L+ MYS C K F + S +V WN+MIS +V
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCG---SVHKSFGVFLSMRER---DVVSWNTMISAFV 395
Query: 296 LNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELD 355
N ++E + L+ + G ID T T+ L A NL N Q H ++ G + +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN--KEIGKQTHAFLIRQGIQFE 453
Query: 356 YIVGSNLIDLYARLGNVKSALELFHR--LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM 413
+ S LID+Y++ G ++ + +LF ++D W+ +I G T++G +L+FR M
Sbjct: 454 GM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Query: 414 INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEI 473
+ N N ++S+L CS + S+ GKQ+H F +++ ++ ++L+DMY K G I
Sbjct: 513 LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAI 572
Query: 474 DDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSAC 533
+F ER+ V++T +I+G GQ+G + AI+ F M +S +KP+ ITF+ VLSAC
Sbjct: 573 KYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSAC 632
Query: 534 RHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPD-KT 592
++GL++E IF M+ Y ++P EHY C+ D+LG+ G ++A + + + + +
Sbjct: 633 SYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE 692
Query: 593 IWASMLKACETHNNTKLVSIIAEQLLA-TSPEDPSKY-VMLSNVYATLGMWDSLSKVRKA 650
+W S+L +C+ H +L ++E+L ++ S Y V+LSN+YA W S+ KVR+
Sbjct: 693 LWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752
Query: 651 GKKLG-EKKAGMSWIEVS 667
++ G +K+ G S IE++
Sbjct: 753 MREKGLKKEVGRSGIEIA 770
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 258/554 (46%), Gaps = 56/554 (10%)
Query: 57 AHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEP-NGFMYSAVLKAC 115
A +LFD + + V W T++ + N P+ A+ Y+ M + + + YS+ LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 116 SLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--------LTRKLFDQYSNW 167
+ + +L G+ +H + R V+ N+L++MYV C + + RK+FD
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR- 176
Query: 168 AASAYGNVALWNSMLS----GGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLAL 223
NV WN+++S G+ A C + G ++ M +K + +
Sbjct: 177 -----KNVVAWNTLISWYVKTGRNAEA-CRQFGI---------MMRMEVKPSPV----SF 217
Query: 224 FNFMPERDV---VSWTGIIVGC-------FECSCFTLSALVDMYSNCNVLCEARKLFDQY 273
N P + + + G + F +S+ + MY+ + +R++FD
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD-- 275
Query: 274 SSWAASAYGNVALWNSMISGYVLNEQNEEAITL-LSHIHSSGMCIDSYTFTSALKACINL 332
+ N+ +WN+MI YV N+ E+I L L I S + D T+ A A L
Sbjct: 276 ----SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSG 392
Q HG + + EL ++ ++L+ +Y+R G+V + +F + ++DVV+W+
Sbjct: 332 QQV--ELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 393 LIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRG 452
+I ++GL+ +L +M ++ ++++L S L + GKQ HAF +++G
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 453 FEKEDITLTSLIDMYLKCGEIDDGLALFK--FMPERDVVSWTGIIVGCGQNGRAKEAIAY 510
+ E + + LIDMY K G I LF+ ERD +W +I G QNG ++
Sbjct: 450 IQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 511 FQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
F++M++ ++PN +T +L AC G V+ + +Y L+ ++ +VD+
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYS 567
Query: 571 QAGCFDDAEQLIAE 584
+AG AE + ++
Sbjct: 568 KAGAIKYAEDMFSQ 581
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN--QFIISS 427
GN + A +LF +PK V W+ +I+G + L A L + M + N + SS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 428 VLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLK------CGEIDDGLALFK 481
LK C+ +L+ GK VH ++ + SL++MY+ C E D +F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEE 541
M ++VV+W +I + GR EA F M++ +KP+ ++F+ V A + +++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 542 AWTIFTSM 549
A + M
Sbjct: 233 ANVFYGLM 240
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+ L C Q S+ GK LH I+ L Q++F + L+ MY+ ++ A +F +
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+N V++TTM+ Y + AI L+ M E G ++P+ + AVL ACS SG +D G
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESG-IKPDAITFVAVLSACSYSGLIDEGL 642
Query: 126 LIHERI 131
I E +
Sbjct: 643 KIFEEM 648
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 338/682 (49%), Gaps = 54/682 (7%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
MD + AL+ C R +K+G +H G + + N ++ MY ++A +
Sbjct: 76 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRP-NWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSG 119
F+ + ++VSW T+++ + N+ N+ +R+ + V + F YS L C S
Sbjct: 134 FENLVDPDVVSWNTILSGFDDNQIALNFVVRM-----KSAGVVFDAFTYSTALSFCVGSE 188
Query: 120 DLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVAL 177
LG + + + LE D V+ N+ + MY + GS R++FD+ S + ++
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS------FKDMIS 242
Query: 178 WNSMLSGGKQVHAF----------CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
WNS+LSG Q F ++ G E + V+ TS+I C E D LA
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC--CHETDLKLA----- 295
Query: 228 PERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALW 287
R + I +E + L+ YS C VL + +F Q S NV W
Sbjct: 296 --RQIHGLC--IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER------NVVSW 345
Query: 288 NSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLI 347
+MIS ++A+++ ++ G+ + TF + A N + L++HGL
Sbjct: 346 TTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV--KCNEQIKEGLKIHGLC 398
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAY 407
+ +G+ + VG++ I LYA+ ++ A + F + +++++W+ +I G ++G + A
Sbjct: 399 IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 458
Query: 408 LLFRDMINSNQDVNQFIISSVLKVCSCLA--SLRRGKQVHAFCVKRGFEKEDITLTSLID 465
+F N++ SVL + S+++G++ HA +K G + ++L+D
Sbjct: 459 KMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 466 MYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEIT 525
MY K G ID+ +F M +++ WT II +G + + F +MI+ + P+ +T
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 526 FLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEM 585
FL VL+AC G+V++ + IF M Y LEP EHY CMVD+LG+AG +AE+L++E+
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 586 PFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLS 645
P P +++ SML +C H N K+ + +AE + PE YV + N+YA WD +
Sbjct: 638 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 697
Query: 646 KVRKAGKKLG-EKKAGMSWIEV 666
++RKA +K K+AG SWI+V
Sbjct: 698 EIRKAMRKKNVSKEAGFSWIDV 719
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 266/519 (51%), Gaps = 57/519 (10%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTS-LIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIV 240
L GK +H GF++ + L++ LI MY+KCG+ D +F+ M R++ SW ++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 241 GCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQN 300
G Y +L AR +FD +V WN+M+ GY +
Sbjct: 122 G---------------YVKSGMLVRARVVFDSMPE------RDVVSWNTMVIGYAQDGNL 160
Query: 301 EEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGS 360
EA+ SG+ + ++F L AC+ + Q HG ++ +G+ + ++
Sbjct: 161 HEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL--QLNRQAHGQVLVAGFLSNVVLSC 218
Query: 361 NLIDLYAR-------------------------------LGNVKSALELFHRLPKKDVVA 389
++ID YA+ LG++++A +LF +P+K+ V+
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 390 WSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCV 449
W+ LI G + G + A LFR MI QF SS L + +ASLR GK++H + +
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 450 KRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPER-DVVSWTGIIVGCGQNGRAKEAI 508
+ I ++SLIDMY K G ++ +F+ ++ D V W +I Q+G +A+
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 509 AYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDL 568
+MI+ R++PN T + +L+AC H+GLVEE F SM ++G+ P EHY C++DL
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 569 LGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKY 628
LG+AGCF + + I EMPF+PDK IW ++L C H N +L A++L+ PE + Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 629 VMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIEV 666
++LS++YA G W+ + K+R KK K+ +SWIE+
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEI 557
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 216/544 (39%), Gaps = 124/544 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQ-DIFTGNNLLSMYADFTSLNDAHKLFDEMARKN 68
L+ CG +S+KQGK +H + G + + N+L+ MY DA K+FD+M +N
Sbjct: 53 LQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRN 112
Query: 69 IVSWTTMVTAYTS-----------NKRPNWAIRLYNHML-------------------EY 98
+ SW MV+ Y + P + +N M+
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSL-- 156
++ N F ++ +L AC S L L R H ++ + VL +++D Y KCG +
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 157 TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGE 216
++ FD+ + ++ +W +++SG Y K G+
Sbjct: 233 AKRCFDEMT------VKDIHIWTTLISG--------------------------YAKLGD 260
Query: 217 IDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSW 276
++ LF MPE++ VSWT +I G
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAG----------------------------------- 285
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
YV A+ L + + G+ + +TF+S L A ++ +
Sbjct: 286 -----------------YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL- 327
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRL--PKKDVVAWSGLI 394
R ++HG ++ + + IV S+LID+Y++ G+++++ +F R+ K D V W+ +I
Sbjct: 328 -RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMI 385
Query: 395 MGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRG-KQVHAFCVKRGF 453
+HGL A + DMI N+ + +L CS + G + + V+ G
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 454 EKEDITLTSLIDMYLKCGEIDDGLALFKFMP-ERDVVSWTGIIVGCGQNGRAKEAIAYFQ 512
+ LID+ + G + + + MP E D W I+ C +G +
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 513 EMIQ 516
E+I+
Sbjct: 506 ELIK 509
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I++A CGQ S K R +DI L+S YA + A KLF EM
Sbjct: 220 IIDAYAKCGQMESAK-------RCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
KN VSWT ++ Y N A+ L+ M+ G V+P F +S+ L A + L G+
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQFTFSSCLCASASIASLRHGK 331
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLF----DQYSNWAASAYGNVALWN 179
IH + R + + +++++L+DMY K GSL + ++F D++ + WN
Sbjct: 332 EIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH---------DCVFWN 382
Query: 180 SMLS-------GGKQVHAF--CVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
+M+S G K + +K + TL +++ G +++GL F M
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 47/253 (18%)
Query: 424 IISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTS-LIDMYLKCGEIDDGL----- 477
+++S+L+ C SL++GK +H GF++ + L++ LI MY+KCG+ D
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 478 --------------------------ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
+F MPERDVVSW +++G Q+G EA+ ++
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 512 QEMIQSRLKPNEITFLGVLSAC---RHAGLVEEAW-TIFTSMKPEYGLEPHLEHYYCMVD 567
+E +S +K NE +F G+L+AC R L +A + + G ++ ++D
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA-----GFLSNVVLSCSIID 222
Query: 568 LLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPE-DPS 626
+ G + A++ EM K D IW +++ + + AE+L PE +P
Sbjct: 223 AYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPV 277
Query: 627 KYVMLSNVYATLG 639
+ L Y G
Sbjct: 278 SWTALIAGYVRQG 290
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 310/664 (46%), Gaps = 120/664 (18%)
Query: 110 AVLKACSLS-GDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGS--LTRKLFDQYSN 166
++L+ C+ S L +L+H+RI L D VL +L+++Y C R +F+ +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD- 66
Query: 167 WAASAYGNVALWNSMLSG------------------------------------------ 184
+V +WNS++SG
Sbjct: 67 ----IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 185 ---GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSW------ 235
G+ +H VK G+ + V +SL+ MY K ++ L +F+ MPERDV SW
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 236 -----------------------------TGIIVGC--------------------FECS 246
T I C FE
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 247 CFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITL 306
+ SALVDMY C+ L AR++F + + A WNSMI GYV ++ + +
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA------WNSMIKGYVAKGDSKSCVEI 296
Query: 307 LSHIHSSGMCIDSYTFTSALKACINLLNF-NSRFALQVHGLIVTSGYELDYIVGSNLIDL 365
L+ + G T TS L AC N + +F +HG ++ S D V +LIDL
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF---IHGYVIRSVVNADIYVNCSLIDL 353
Query: 366 YARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFII 425
Y + G A +F + K +W+ +I G A ++ M++ +
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 426 SSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPE 485
+SVL CS LA+L +GKQ+H + E +++ L++L+DMY KCG + +F +P+
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTI 545
+DVVSWT +I G +G+ +EA+ F EM + LKP+ +T L VLSAC HAGL++E
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 546 FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKT-IWASMLKACETH 604
F+ M+ +YG+EP +EHY CM+D+LG+AG +A ++I + P D + +++ AC H
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 605 NNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSW 663
L IA L+ P+D S Y++L N+YA+ WD+ +VR K++G KK G SW
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 664 IEVS 667
IE+S
Sbjct: 654 IEMS 657
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 311/594 (52%), Gaps = 47/594 (7%)
Query: 88 AIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLL 147
AIR+ N + +Y+++L+ C+ G H + + LE D + N+LL
Sbjct: 45 AIRILNST-HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 148 DMYVKCGS---LTRKLFD-QYSNWAASAYGNVALWNSMLSG---GKQ------VHAFCVK 194
+Y K G TR++FD ++ A S W SM+SG GK+ V V
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAIS-------WTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 195 RGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALV 254
G + + TL+S + + GE+ G +I FE + F S L
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGV-----------VITHGFEWNHFISSTLA 205
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIH-SS 313
+Y +AR++FD+ +V W +++S + N+ EEA+ L +H
Sbjct: 206 YLYGVNREPVDARRVFDEMPE------PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 314 GMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVK 373
G+ D TF + L AC NL ++HG ++T+G + +V S+L+D+Y + G+V+
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQ--GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 374 SALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCS 433
A ++F+ + KK+ V+WS L+ G ++G + A +FR+M ++ + + +VLK C+
Sbjct: 318 EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACA 373
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
LA++R GK++H V+RG I ++LID+Y K G ID ++ M R++++W
Sbjct: 374 GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNA 433
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
++ QNGR +EA+++F +M++ +KP+ I+F+ +L+AC H G+V+E F M Y
Sbjct: 434 MLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSY 493
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETH-NNTKLVSI 612
G++P EHY CM+DLLG+AG F++AE L+ + D ++W +L C + + +++
Sbjct: 494 GIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAER 553
Query: 613 IAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG-EKKAGMSWIE 665
IA++++ P+ YV+LSN+Y +G +RK + G K G SWI+
Sbjct: 554 IAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 299 QNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIV 358
Q EAI +L+ HSS + + S L+ C + +F +Q H +V SG E D V
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSF--IHGIQFHAHVVKSGLETDRNV 98
Query: 359 GSNLIDLYARLG-NVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSN 417
G++L+ LY +LG ++ +F KD ++W+ ++ G + A +F +M++
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 418 QDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGL 477
D N+F +SS +K CS L +R G+ H + GFE ++L +Y E D
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 478 ALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSR-LKPNEITFLGVLSACRHA 536
+F MPE DV+ WT ++ +N +EA+ F M + + L P+ TF VL+AC +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 537 GLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWAS 596
+++ I + G+ ++ ++D+ G+ G +A Q+ M K + W++
Sbjct: 279 RRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSA 336
Query: 597 MLKA-CETHNNTKLVSIIAE 615
+L C+ + K + I E
Sbjct: 337 LLGGYCQNGEHEKAIEIFRE 356
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 200/486 (41%), Gaps = 108/486 (22%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADF-TSLNDAHKLFDEMARKN 68
L+ C + S G H ++K GL D GN+LLS+Y + + ++FD K+
Sbjct: 68 LQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKD 127
Query: 69 IVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIH 128
+SWT+M++ Y + K A+ ++ M+ +G ++ N F S+ +KACS G++ LGR H
Sbjct: 128 AISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 129 ERITREKLEYDTVLMNTLLDMYV--KCGSLTRKLFDQYSN-----WAA--SAYGN----- 174
+ E++ + +TL +Y + R++FD+ W A SA+
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 175 --VALWNSMLSG-------------------------GKQVHAFCVKRGFEKEDVTLTSL 207
+ L+ +M G GK++H + G V +SL
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 306
Query: 208 IDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG-----------------------CF- 243
+DMY KCG + + +FN M +++ VSW+ ++ G CF
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFG 366
Query: 244 ----ECS-------------------CF----TLSALVDMYSNCNVLCEARKLFDQYSSW 276
C+ CF SAL+D+Y + A +++ + S
Sbjct: 367 TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-- 424
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN---LL 333
N+ WN+M+S N + EEA++ + + G+ D +F + L AC + +
Sbjct: 425 ----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 334 NFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSG 392
+ F L + G E Y S +IDL R G + A L R + D W
Sbjct: 481 EGRNYFVLMAKSYGIKPGTE-HY---SCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 393 LIMGCT 398
L+ C
Sbjct: 537 LLGPCA 542
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 254/486 (52%), Gaps = 25/486 (5%)
Query: 182 LSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVG 241
L GKQ+H V GF + L+ MY K G+ +A++ M +++ +S +I G
Sbjct: 60 LPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING 119
Query: 242 CFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNE 301
Y L ARK+FD+ + WN+MI+G + E NE
Sbjct: 120 ---------------YVRAGDLVNARKVFDEMPDR------KLTTWNAMIAGLIQFEFNE 158
Query: 302 EAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSN 361
E ++L +H G D YT S L + + Q+HG + G ELD +V S+
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVS--IGQQIHGYTIKYGLELDLVVNSS 216
Query: 362 LIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVN 421
L +Y R G ++ + +P +++VAW+ LIMG ++G L++ M S N
Sbjct: 217 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 276
Query: 422 QFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFK 481
+ +VL CS LA +G+Q+HA +K G ++SLI MY KCG + D F
Sbjct: 277 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 336
Query: 482 FMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMI-QSRLKPNEITFLGVLSACRHAGLVE 540
+ D V W+ +I G +G+ EAI F M Q+ ++ NE+ FL +L AC H+GL +
Sbjct: 337 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 396
Query: 541 EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKA 600
+ +F M +YG +P L+HY C+VDLLG+AGC D AE +I MP K D IW ++L A
Sbjct: 397 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Query: 601 CETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGK-KLGEKKA 659
C H N ++ + +++L P D + YV+L+NV+A+ W +S+VRK+ + K +K+A
Sbjct: 457 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 516
Query: 660 GMSWIE 665
G+SW E
Sbjct: 517 GISWFE 522
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 203/549 (36%), Gaps = 157/549 (28%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYA---DFTS------------- 53
++ C R+S+ GK LHC ++ G S D F N+L+SMY+ DF S
Sbjct: 51 IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110
Query: 54 ---------------LNDAHKLFDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEY 98
L +A K+FDEM + + +W M+ + + L+ M
Sbjct: 111 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 170
Query: 99 GSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTR 158
G P+ + +V + + +G+ IH + LE D V+ ++L MY++ G
Sbjct: 171 G-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG---- 225
Query: 159 KLFDQYSNWAASAYGNVALWNSMLSG---------------------------------- 184
KL D + N+ WN+++ G
Sbjct: 226 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 285
Query: 185 ----------GKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVS 234
G+Q+HA +K G ++SLI MY KCG + D F+ + D V
Sbjct: 286 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 345
Query: 235 WTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGY 294
W+ +I SAYG
Sbjct: 346 WSSMI---------------------------------------SAYG------------ 354
Query: 295 VLNEQNEEAITLLSHI-HSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGL------I 347
+ Q +EAI L + + + M I+ F + L AC S L+ GL +
Sbjct: 355 -FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC-------SHSGLKDKGLELFDMMV 406
Query: 348 VTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWSGLIMGCTKHGLNSLA 406
G++ + ++DL R G + A + +P K D+V W L+ C H +A
Sbjct: 407 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 466
Query: 407 YLLFRDM--INSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLI 464
+F+++ I+ N ++++V AS +R + V V++ +++ + I
Sbjct: 467 QRVFKEILQIDPNDSACYVLLANV------HASAKRWRDVSE--VRKSMRDKNVKKEAGI 518
Query: 465 DMYLKCGEI 473
+ GE+
Sbjct: 519 SWFEHKGEV 527
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 7 VEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMAR 66
V L C QG+ +H IK G S + ++L+SMY+ L DA K F E
Sbjct: 281 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 340
Query: 67 KNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLG 124
++ V W++M++AY + + + AI L+N M E ++E N + +L ACS SG D G
Sbjct: 341 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 87/230 (37%), Gaps = 51/230 (22%)
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
C+K L A+ FR I +N + + ++ C+ SL GKQ+H V GF +
Sbjct: 24 CSKGNLRE-AFQRFRLNIFTNTS----LFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 457 DITLTSLIDMYLKCGEIDDGLA-------------------------------LFKFMPE 485
L+ MY K G+ +A +F MP+
Sbjct: 79 KFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD 138
Query: 486 RDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVE----- 540
R + +W +I G Q +E ++ F+EM P+E T V S AGL
Sbjct: 139 RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS--AGLRSVSIGQ 196
Query: 541 --EAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFK 588
+TI +YGLE L + + + G D E +I MP +
Sbjct: 197 QIHGYTI------KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR 240
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 285 bits (730), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 196/708 (27%), Positives = 332/708 (46%), Gaps = 116/708 (16%)
Query: 10 LRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNI 69
L+ C + + G S+H +++ G S D + ++L+++YA F L A K+F+EM +++
Sbjct: 53 LKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDV 112
Query: 70 VSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRL--I 127
V WT M+ Y+ A L N M + ++P V LSG L++ +L +
Sbjct: 113 VHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPG-----PVTLLEMLSGVLEITQLQCL 166
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSG- 184
H+ + D +MN++L++Y KC + + LFDQ ++ WN+M+SG
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR------DMVSWNTMISGY 220
Query: 185 -------------------------------------------GKQVHAFCVKRGFEKED 201
G+ +H VK GF+ +
Sbjct: 221 ASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM 280
Query: 202 VTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCN 261
T+LI MYLKCG+ + + +P N +
Sbjct: 281 HLKTALITMYLKCGKEEASYRVLETIP------------------------------NKD 310
Query: 262 VLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYT 321
V+C W MISG + + E+A+ + S + SG + S
Sbjct: 311 VVC----------------------WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 322 FTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S + +C L +F+ VHG ++ GY LD ++LI +YA+ G++ +L +F R
Sbjct: 349 IASVVASCAQLGSFD--LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 382 LPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDM-INSNQDVNQFIISSVLKVCSCLASLRR 440
+ ++D+V+W+ +I G ++ A LLF +M + Q V+ F + S+L+ CS +L
Sbjct: 407 MNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV 466
Query: 441 GKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQ 500
GK +H ++ + T+L+DMY KCG ++ F + +DVVSW +I G G
Sbjct: 467 GKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGF 526
Query: 501 NGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLE 560
+G+ A+ + E + S ++PN + FL VLS+C H G+V++ IF+SM ++G+EP+ E
Sbjct: 527 HGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE 586
Query: 561 HYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLAT 620
H C+VDLL +A +DA + E +P + +L AC + T++ II E ++
Sbjct: 587 HLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIEL 646
Query: 621 SPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKK-AGMSWIEVS 667
P D YV L + +A + WD +S+ + LG KK G S IE++
Sbjct: 647 KPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 254/542 (46%), Gaps = 43/542 (7%)
Query: 103 PNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLT--RKL 160
P+ F + ++LKAC+ L G IH+++ D + ++L+++Y K G L RK+
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 161 FDQYSNWAASAYGNVALWNSML---SGGKQVHAFCVK------RGFEKEDVTLTSLIDMY 211
F++ +V W +M+ S V C +G + VTL ++
Sbjct: 104 FEEMRER------DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGV 157
Query: 212 LKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFD 271
L EI L +F +I G F+C +++++++Y C+ + +A+ LFD
Sbjct: 158 L---EITQLQCLHDF----------AVIYG-FDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 272 QYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACIN 331
Q ++ WN+MISGY E + LL + G+ D TF ++L
Sbjct: 204 QMEQR------DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 332 LLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWS 391
+ + +H IV +G+++D + + LI +Y + G +++ + +P KDVV W+
Sbjct: 258 MCDL--EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 392 GLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKR 451
+I G + G A ++F +M+ S D++ I+SV+ C+ L S G VH + ++
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 452 GFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYF 511
G+ + L SLI MY KCG +D L +F+ M ERD+VSW II G QN +A+ F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 512 QEM-IQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLG 570
+EM ++ + + T + +L AC AG + I + + + P +VD+
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYS 494
Query: 571 QAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVM 630
+ G + A++ + +K D W ++ H + I + L + E P+ +
Sbjct: 495 KCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME-PNHVIF 552
Query: 631 LS 632
L+
Sbjct: 553 LA 554
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 180/369 (48%), Gaps = 12/369 (3%)
Query: 277 AASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFN 336
+S + +NS I+ + +++ ++ S + ++ + D++TF S LKAC +L +
Sbjct: 4 TSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLS 63
Query: 337 SRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMG 396
F L +H ++ +G+ D+ + S+L++LYA+ G + A ++F + ++DVV W+ +I
Sbjct: 64 --FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 397 CTKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKE 456
++ G+ A L +M Q + + ++L++ S + + + + +H F V GF+ +
Sbjct: 122 YSRAGIVGEACSLVNEM--RFQGIKPGPV-TLLEMLSGVLEITQLQCLHDFAVIYGFDCD 178
Query: 457 DITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQ 516
+ S++++Y KC + D LF M +RD+VSW +I G G E + M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 517 SRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM-KPEYGLEPHLEHYYCMVDLLGQAGCF 575
L+P++ TF LS +E + + K + ++ HL+ ++ + + G
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKE 296
Query: 576 DDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQLLATSPEDPSKYVMLSNVY 635
+ + +++ +P K D W M+ + I+ ++L S D S + S V
Sbjct: 297 EASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIVFSEML-QSGSDLSSEAIASVVA 354
Query: 636 --ATLGMWD 642
A LG +D
Sbjct: 355 SCAQLGSFD 363
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I + C Q S G S+H ++++G + D N+L++MYA L+ + +F+ M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
+++VSW +++ Y N A+ L+ M + + F ++L+ACS +G L +G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLS 183
LIH + R + +++ L+DMY KCG L ++ FD S + +V W +++
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS------WKDVVSWGILIA 522
Query: 184 G----GK-----QVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFM 227
G GK ++++ + G E V +++ G + GL +F+ M
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L+ C ++ GK +HC +I+ + L+ MY+ L A +
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
FD ++ K++VSW ++ Y + + + A+ +Y+ L G +EPN ++ AVL +CS +G
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG-MEPNHVIFLAVLSSCSHNGM 564
Query: 121 LDLGRLIHERITRE 134
+ G I + R+
Sbjct: 565 VQQGLKIFSSMVRD 578
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 188/642 (29%), Positives = 314/642 (48%), Gaps = 34/642 (5%)
Query: 21 QGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMVTAYT 80
Q + + + K GL + ++ +LL++Y + A LFDEM ++ V W ++ Y+
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 81 SNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLIHERITREKLEYDT 140
N A +L+ ML+ G P+ +L C G + GR +H + LE D+
Sbjct: 128 RNGYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 141 VLMNTLLDMYVKCGSL--TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFE 198
+ N L+ Y KC L LF + + + + WN+M+ Q G +
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVS------WNTMIGAYSQ-------SGLQ 233
Query: 199 KEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCF----TLSALV 254
+E +T+ +M+ K EI + + N + VS + +C +++LV
Sbjct: 234 EEAITV--FKNMFEKNVEISP-VTIINLLSAH--VSHEPLHCLVVKCGMVNDISVVTSLV 288
Query: 255 DMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSG 314
YS C L A +L+ A++ ++ S++S Y + A+ S
Sbjct: 289 CAYSRCGCLVSAERLY------ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 342
Query: 315 MCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKS 374
M ID+ L C + + + +HG + SG +V + LI +Y++ +V++
Sbjct: 343 MKIDAVALVGILHGCKKSSHID--IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 375 ALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFI-ISSVLKVCS 433
L LF +L + +++W+ +I GC + G S A+ +F M+ + + I I+S+L CS
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 434 CLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTG 493
L L GK++H + ++ FE E+ T+LIDMY KCG ++FK + +W
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Query: 494 IIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSMKPEY 553
+I G +G A++ + EM + LKP+EITFLGVLSAC H G V+E F +M E+
Sbjct: 521 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 580
Query: 554 GLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKLVSII 613
G+ P L+HY MV LLG+A F +A LI +M KPD +W ++L AC H ++ +
Sbjct: 581 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYV 640
Query: 614 AEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLG 655
A ++ ++ YV++SN+YAT MWD + +VR K G
Sbjct: 641 ARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 169/414 (40%), Gaps = 70/414 (16%)
Query: 178 WNSMLSGGKQVHAFCVKRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTG 237
+NS +QV K G ++ TSL+++YLK G + LF+ MPERD V W
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 238 IIVG----CFECSCFTL------------------------------------------- 250
+I G +EC + L
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 251 --------SALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEE 302
+AL+ YS C L A LF + + + WN+MI Y + EE
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVS------WNTMIGAYSQSGLQEE 235
Query: 303 AITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNL 362
AIT+ ++ + I T INLL+ + +H L+V G D V ++L
Sbjct: 236 AITVFKNMFEKNVEISPVTI-------INLLSAHVSHE-PLHCLVVKCGMVNDISVVTSL 287
Query: 363 IDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQ 422
+ Y+R G + SA L+ + +V + ++ + G +A + F ++
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 423 FIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKF 482
+ +L C + + G +H + +K G + + + LI MY K +++ L LF+
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 483 MPERDVVSWTGIIVGCGQNGRAKEAIAYF-QEMIQSRLKPNEITFLGVLSACRH 535
+ E ++SW +I GC Q+GRA A F Q M+ L P+ IT +L+ C
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 6/255 (2%)
Query: 281 YGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINLLNFNSRFA 340
Y +++ ++S++ + E + IT+ + S + + +T + L+A +FNS F
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT--SFNS-FK 66
Query: 341 LQVHGL---IVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGC 397
LQV + + SG + V ++L++LY + G V SA LF +P++D V W+ LI G
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 398 TKHGLNSLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKED 457
+++G A+ LF M+ + + ++L C + +G+ VH K G E +
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 458 ITLTSLIDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQS 517
+LI Y KC E+ LF+ M ++ VSW +I Q+G +EAI F+ M +
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 518 RLKPNEITFLGVLSA 532
++ + +T + +LSA
Sbjct: 247 NVEISPVTIINLLSA 261
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 184/489 (37%), Gaps = 105/489 (21%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
+V L CGQ + QG+S+H K GL D N L+S Y+ L A LF EM
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLE----------------YGSVEPNGFMYS 109
K+ VSW TM+ AY+ + AI ++ +M E + S EP ++
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP---LHC 270
Query: 110 AVLKACSLSGDLDL-----------GRLIH-ERITREKLEYDTVLMNTLLDMYVKCGSL- 156
V+K C + D+ + G L+ ER+ + V + +++ Y + G +
Sbjct: 271 LVVK-CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 157 --------TRKLFDQYSNWAASAYGNVALWNSMLSGGKQVHAFCVKRGFEKEDVTLTSLI 208
TR+L + A + +S + G +H + +K G + + + LI
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 209 DMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFE------------------------ 244
MY K +++ L LF + E ++SW +I GC +
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 245 ---------CS---CFTL--------------------SALVDMYSNCNVLCEARKLFDQ 272
CS C L +AL+DMY+ C +A +F
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 273 YSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFTSALKACINL 332
+ A WNSMISGY L+ A++ + G+ D TF L AC N
Sbjct: 510 IKAPCT------ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC-NH 562
Query: 333 LNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLP-KKDVVAWS 391
F + +I G + ++ L R AL L ++ K D W
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 392 GLIMGCTKH 400
L+ C H
Sbjct: 623 ALLSACIIH 631
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
+D +V L C + I G SLH IK GL N L++MY+ F + L
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 61 FDEMARKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGD 120
F+++ ++SW ++++ + R + A +++ M+ G + P+ +++L CS
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 121 LDLGRLIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNV----- 175
L+LG+ +H R E + + L+DMY KCG+ + A S + ++
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ---------AESVFKSIKAPCT 515
Query: 176 ALWNSMLSG----GKQVHAFCV-----KRGFEKEDVTLTSLIDMYLKCGEIDDGLALFNF 226
A WNSM+SG G Q A ++G + +++T ++ G +D+G F
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRA 575
Query: 227 MPERDVVSWT----GIIVGCFECSCFTLSALVDMYSNCNVLCEARKLFDQYSSWAASAYG 282
M + +S T ++VG +C AL Y W
Sbjct: 576 MIKEFGISPTLQHYALMVGLLGRACLFTEAL-------------------YLIWKMDIKP 616
Query: 283 NVALWNSMISGYVLNEQNE 301
+ A+W +++S +++ + E
Sbjct: 617 DSAVWGALLSACIIHRELE 635
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 234/418 (55%), Gaps = 9/418 (2%)
Query: 250 LSALVDMYSNCNVLCEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSH 309
L+ L++ YS C + AR++FD ++ WN+MI Y N EA+ +
Sbjct: 99 LNVLINAYSKCGFVELARQVFD------GMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 310 IHSSGMCIDSYTFTSALKACINLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARL 369
+ + G +T +S L AC +N ++ ++H L V + +L+ VG+ L+DLYA+
Sbjct: 153 MRNEGFKFSEFTISSVLSAC--GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 370 GNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLNSLAYLLFRDMINSNQDVNQFIISSVL 429
G +K A+++F + K V WS ++ G ++ A LL+R + + NQF +SSV+
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 430 KVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDDGLALFKFMPERDVV 489
CS LA+L GKQ+HA K GF +S +DMY KCG + + +F + E+++
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 490 SWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRHAGLVEEAWTIFTSM 549
W II G ++ R KE + F++M Q + PNE+TF +LS C H GLVEE F M
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 550 KPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTIWASMLKACETHNNTKL 609
+ YGL P++ HY CMVD+LG+AG +A +LI +PF P +IW S+L +C + N +L
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 610 VSIIAEQLLATSPEDPSKYVMLSNVYATLGMWDSLSKVRKAGKKLGEKKA-GMSWIEV 666
+ AE+L PE+ +V+LSN+YA W+ ++K RK + KK G SWI++
Sbjct: 451 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 344 HGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHRLPKKDVVAWSGLIMGCTKHGLN 403
HG I+ E D + + LI+ Y++ G V+ A ++F + ++ +V+W+ +I T++ +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 404 SLAYLLFRDMINSNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSL 463
S A +F +M N ++F ISSVL C K++H VK + T+L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 464 IDMYLKCGEIDDGLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNE 523
+D+Y KCG I D + +F+ M ++ V+W+ ++ G QN +EA+ ++ + L+ N+
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 524 ITFLGVLSACRH-AGLVEEAWTIFTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLI 582
T V+ AC + A L+E K +G + VD+ + G ++ +
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS--SAVDMYAKCGSLRESYIIF 321
Query: 583 AEMPFKPDKTIWASMLKACETHNNTKLVSIIAEQL 617
+E+ K + +W +++ H K V I+ E++
Sbjct: 322 SEVQEK-NLELWNTIISGFAKHARPKEVMILFEKM 355
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 6 IVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMA 65
I L CG + K LHC +K + +++ G LL +YA + DA ++F+ M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 66 RKNIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGR 125
K+ V+W++MV Y NK A+ LY + S+E N F S+V+ ACS L G+
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 126 LIHERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG- 184
+H I + + + ++ +DMY KCGSL + Y ++ N+ LWN+++SG
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLR----ESYIIFSEVQEKNLELWNTIISGF 339
Query: 185 GKQVHAFCVKRGFEK--------EDVTLTSLIDMYLKCGEIDDGLALFNFMPERDVVSWT 236
K V FEK +VT +SL+ + G +++G F M +
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR-----TTY 394
Query: 237 GIIVGCFECSCFTLSALVDMYSNCNVLCEARKL-----FDQYSS-WAA-----SAYGNVA 285
G+ SC +VD+ +L EA +L FD +S W + Y N+
Sbjct: 395 GLSPNVVHYSC-----MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 286 LWNSMISG-YVLNEQNEEAITLLSHIHSS 313
L + L +N LLS+I+++
Sbjct: 450 LAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 167/437 (38%), Gaps = 107/437 (24%)
Query: 8 EALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARK 67
E L+ C + ++ + K+ H +II+ L D+ N L++ Y+ + A ++FD M +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 68 NIVSWTTMVTAYTSNKRPNWAIRLYNHMLEYGSVEPNGFMYSAVLKACSLSGDLDLGRLI 127
++VSW TM+ YT N+ + A+ ++ M G + + F S+VL AC ++ D + +
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACGVNCDALECKKL 184
Query: 128 HERITREKLEYDTVLMNTLLDMYVKCGSLTRKLFDQYSNWAASAYGNVALWNSMLSG--- 184
H + ++ + + LLD+Y KCG + D + + + W+SM++G
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIK----DAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 185 -----------------------------------------GKQVHAFCVKRGFEKEDVT 203
GKQ+HA K GF
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 204 LTSLIDMYLKCGEIDDGLALFNFMPERDVVSWTGIIVGCFECSCFTLSALVDMYSNCNVL 263
+S +DMY KCG + + +F+ + E+++ W II G
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG---------------------- 338
Query: 264 CEARKLFDQYSSWAASAYGNVALWNSMISGYVLNEQNEEAITLLSHIHSSGMCIDSYTFT 323
+ + + +E + L + GM + TF+
Sbjct: 339 ------------------------------FAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 324 SALKAC--INLLNFNSRFALQVHGLIVTSGYELDYIVGSNLIDLYARLGNVKSALELFHR 381
S L C L+ RF + T G + + S ++D+ R G + A EL
Sbjct: 369 SLLSVCGHTGLVEEGRRF---FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 382 LPKKDVVA-WSGLIMGC 397
+P + W L+ C
Sbjct: 426 IPFDPTASIWGSLLASC 442
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 416 SNQDVNQFIISSVLKVCSCLASLRRGKQVHAFCVKRGFEKEDITLTSLIDMYLKCGEIDD 475
SN+ N+ ++ +L++C+ ++ K H ++ E + L LI+ Y KCG ++
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114
Query: 476 GLALFKFMPERDVVSWTGIIVGCGQNGRAKEAIAYFQEMIQSRLKPNEITFLGVLSACRH 535
+F M ER +VSW +I +N EA+ F EM K +E T VLSAC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC-- 172
Query: 536 AGLVEEAWTI--FTSMKPEYGLEPHLEHYYCMVDLLGQAGCFDDAEQLIAEMPFKPDKTI 593
G+ +A + + ++ +L ++DL + G DA Q+ M K T
Sbjct: 173 -GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT- 230
Query: 594 WASML 598
W+SM+
Sbjct: 231 WSSMV 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,394,369
Number of Sequences: 539616
Number of extensions: 10284241
Number of successful extensions: 31589
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 21793
Number of HSP's gapped (non-prelim): 2391
length of query: 668
length of database: 191,569,459
effective HSP length: 124
effective length of query: 544
effective length of database: 124,657,075
effective search space: 67813448800
effective search space used: 67813448800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)