BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005944
(668 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 164/265 (61%), Gaps = 18/265 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G +G VY G +L + +A+K++ E+ + + H N
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI--------PERDSRYSQPLHEEIALHKHLKHKN 80
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFP--ESVIRMYTKQLLLGLEYLHK 187
IV+YLG+ E+ + I +E VPGGS+S+LL K+G E I YTKQ+L GL+YLH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 188 NGIMHRDIKGANILVDN-KGCIKLADFGASKKVVELATIN-GAKSMKGTPYWMAPEVILQ 245
N I+HRDIKG N+L++ G +K++DFG SK+ LA IN ++ GT +MAPE+I +
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR---LAGINPCTETFTGTLQYMAPEIIDK 197
Query: 246 --TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
G+ +ADIWS+GCT+IEMATGKPP+ + + AA+F +G K HP IPE +S EAK
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 257
Query: 304 FLLKCLQKEPYLRSTASELLQHPFV 328
F+LKC + +P R+ A++LL F+
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 164/265 (61%), Gaps = 18/265 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G +G VY G +L + +A+K++ E+ + + H N
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI--------PERDSRYSQPLHEEIALHKHLKHKN 66
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFP--ESVIRMYTKQLLLGLEYLHK 187
IV+YLG+ E+ + I +E VPGGS+S+LL K+G E I YTKQ+L GL+YLH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 188 NGIMHRDIKGANILVDN-KGCIKLADFGASKKVVELATIN-GAKSMKGTPYWMAPEVILQ 245
N I+HRDIKG N+L++ G +K++DFG SK+ LA IN ++ GT +MAPE+I +
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR---LAGINPCTETFTGTLQYMAPEIIDK 183
Query: 246 --TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
G+ +ADIWS+GCT+IEMATGKPP+ + + AA+F +G K HP IPE +S EAK
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 243
Query: 304 FLLKCLQKEPYLRSTASELLQHPFV 328
F+LKC + +P R+ A++LL F+
Sbjct: 244 FILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 23/276 (8%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GEL G GAFG+VY N ++ L A K + ++ S+E+ + ++ H
Sbjct: 43 GEL-GDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYM----VEIDILASCDH 93
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
PNIV+ L +++L IL+EF GG++ +++ + ES I++ KQ L L YLH
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
N I+HRD+K NIL G IKLADFG S K TI S GTPYWMAPEV++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI---PEHLSM 299
+ + AD+WS+G T+IEMA +PP + + L I KS PP P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPTLAQPSRWSS 268
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
KDFL KCL+K R T S+LLQHPFVT P
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 23/270 (8%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GEL G GAFG+VY N ++G L A K + + S+E+ + +I H
Sbjct: 25 GEL-GDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYI----VEIEILATCDH 75
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
P IV+ LG D L I++EF PGG++ +++ + E I++ +Q+L L +LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K N+L+ +G I+LADFG S K L T+ S GTPYWMAPEV++
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPP---IPEHLSM 299
T + + ADIWS+G T+IEMA +PP + + L I KS PP P S+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPP-HHELNPMRVLLKIA--KSDPPTLLTPSKWSV 250
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
E +DFL L K P R +A++LL+HPFV+
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 23/270 (8%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GEL G GAFG+VY N ++G L A K + + S+E+ + +I H
Sbjct: 17 GEL-GDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYI----VEIEILATCDH 67
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG-SFPESVIRMYTKQLLLGLEYLHK 187
P IV+ LG D L I++EF PGG++ +++ + E I++ +Q+L L +LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K N+L+ +G I+LADFG S K L T+ S GTPYWMAPEV++
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPP---IPEHLSM 299
T + + ADIWS+G T+IEMA +PP + + L I KS PP P S+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPP-HHELNPMRVLLKIA--KSDPPTLLTPSKWSV 242
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
E +DFL L K P R +A++LL+HPFV+
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 148/276 (53%), Gaps = 23/276 (8%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GEL G GAFG+VY N ++ L A K + ++ S+E+ + ++ H
Sbjct: 43 GEL-GDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYM----VEIDILASCDH 93
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
PNIV+ L +++L IL+EF GG++ +++ + ES I++ KQ L L YLH
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
N I+HRD+K NIL G IKLADFG S K I S GTPYWMAPEV++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI---PEHLSM 299
+ + AD+WS+G T+IEMA +PP + + L I KS PP P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPTLAQPSRWSS 268
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
KDFL KCL+K R T S+LLQHPFVT P
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 147/276 (53%), Gaps = 23/276 (8%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GEL G GAFG+VY N ++ L A K + ++ S+E+ + ++ H
Sbjct: 43 GEL-GDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYM----VEIDILASCDH 93
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
PNIV+ L +++L IL+EF GG++ +++ + ES I++ KQ L L YLH
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
N I+HRD+K NIL G IKLADFG S K I GTPYWMAPEV++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI---PEHLSM 299
+ + AD+WS+G T+IEMA +PP + + L I KS PP P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPTLAQPSRWSS 268
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
KDFL KCL+K R T S+LLQHPFVT P
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 147/276 (53%), Gaps = 22/276 (7%)
Query: 70 ELVG-CGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
E++G G FG+VY N ++ L A K + ++ S+E+ + ++ H
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYM----VEIDILASCDH 66
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
PNIV+ L +++L IL+EF GG++ +++ + ES I++ KQ L L YLH
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
N I+HRD+K NIL G IKLADFG S K I S GTPYWMAPEV++
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-TXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 245 --QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI---PEHLSM 299
+ + AD+WS+G T+IEMA +PP + + L I KS PP P S
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIA--KSEPPTLAQPSRWSS 242
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
KDFL KCL+K R T S+LLQHPFVT P
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 146/263 (55%), Gaps = 14/263 (5%)
Query: 68 KGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
K + +G G+FG VY G++ + E++A+K + + E Q I
Sbjct: 23 KLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI-------TVLSQCD 75
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
P I RY G+ + L I++E++ GGS LL K G E+ I +++L GL+YLH
Sbjct: 76 SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHS 134
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRDIK AN+L+ +G +KLADFG + ++ + T GTP+WMAPEVI Q+
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE-HLSMEAKDFLL 306
+ F ADIWS+G T IE+A G+PP + + LF I K+ PP E S K+F+
Sbjct: 193 YDFKADIWSLGITAIELAKGEPP-NSDLHPMRVLFLI--PKNSPPTLEGQHSKPFKEFVE 249
Query: 307 KCLQKEPYLRSTASELLQHPFVT 329
CL K+P R TA ELL+H F+T
Sbjct: 250 ACLNKDPRFRPTAKELLKHKFIT 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 151/263 (57%), Gaps = 19/263 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G++G VY ++ ++G+++A+KQV + ++ ++ P
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----------LQEIIKEISIMQQCDSP 84
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V+Y G+ ++ L I++E+ GS+S ++ + + E I + L GLEYLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
+HRDIK NIL++ +G KLADFG + ++ + + + GTP+WMAPEVI + G+
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 249 SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI---PEHLSMEAKDFL 305
+ ADIWS+G T IEMA GKPP++ + A+F I T PP PE S DF+
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYA-DIHPMRAIFMIPTNP--PPTFRKPELWSDNFTDFV 259
Query: 306 LKCLQKEPYLRSTASELLQHPFV 328
+CL K P R+TA++LLQHPFV
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFV 282
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 155/283 (54%), Gaps = 15/283 (5%)
Query: 48 PAVPALPPIEKTDAPPIR-WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASK 106
P LP ++ A P + K E +G G+FG V+ G++ + +++A+K + +
Sbjct: 5 PVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI 64
Query: 107 EKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSF 166
E Q I P + +Y G+ +D L I++E++ GGS LL + G
Sbjct: 65 EDIQQEITVLSQCDS-------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPL 116
Query: 167 PESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN 226
E+ I +++L GL+YLH +HRDIK AN+L+ G +KLADFG + ++ + T
Sbjct: 117 DETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQI 174
Query: 227 GAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGT 286
GTP+WMAPEVI Q+ + ADIWS+G T IE+A G+PP S + + LF I
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS-ELHPMKVLFLI-- 231
Query: 287 TKSHPPIPE-HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
K++PP E + S K+F+ CL KEP R TA ELL+H F+
Sbjct: 232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 149/268 (55%), Gaps = 14/268 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P + K E +G G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 84
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
P + +Y G+ +D L I++E++ GGS LL G E+ I +++L G
Sbjct: 85 -------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKG 136
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
L+YLH +HRDIK AN+L+ G +KLADFG + ++ + T + GTP+WMAPE
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPE 194
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE-HLSME 300
VI Q+ + ADIWS+G T IE+A G+PP S + + LF I K++PP E + S
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHS-ELHPMKVLFLI--PKNNPPTLEGNYSKP 251
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
K+F+ CL KEP R TA ELL+H F+
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 149/268 (55%), Gaps = 14/268 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P + K E +G G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-------T 57
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
P + +Y G+ +D L I++E++ GGS LL G E+ I +++L G
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKG 116
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
L+YLH +HRDIK AN+L+ G +KLADFG + ++ + T + GTP+WMAPE
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPE 174
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE-HLSME 300
VI Q+ + ADIWS+G T IE+A G+PP S + + LF I K++PP E + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHS-ELHPMKVLFLI--PKNNPPTLEGNYSKP 231
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
K+F+ CL KEP R TA ELL+H F+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 148/268 (55%), Gaps = 14/268 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P + K E +G G+FG V+ G++ + +++A+K + + E Q I
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-------T 57
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
P + +Y G+ +D L I++E++ GGS LL G E+ I +++L G
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKG 116
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
L+YLH +HRDIK AN+L+ G +KLADFG + ++ + T GTP+WMAPE
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPE 174
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE-HLSME 300
VI Q+ + ADIWS+G T IE+A G+PP S + + LF I K++PP E + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHS-ELHPMKVLFLI--PKNNPPTLEGNYSKP 231
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
K+F+ CL KEP R TA ELL+H F+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 153/284 (53%), Gaps = 15/284 (5%)
Query: 48 PAVPALPPIEKTDAPPIR-WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASK 106
P +P ++ A P + K E +G G+FG V+ G++ + +++A+K + +
Sbjct: 6 PVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI 65
Query: 107 EKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSF 166
E Q I + +Y G+ + L I++E++ GGS LL + G F
Sbjct: 66 EDIQQEITVLSQCDSSY-------VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPF 117
Query: 167 PESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN 226
E I K++L GL+YLH +HRDIK AN+L+ +G +KLADFG + ++ + T
Sbjct: 118 DEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQI 175
Query: 227 GAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGT 286
+ GTP+WMAPEVI Q+ + ADIWS+G T IE+A G+PP + + LF I
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP-NSDMHPMRVLFLI-- 232
Query: 287 TKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
K++PP + + K+F+ CL K+P R TA ELL+H F+
Sbjct: 233 PKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIV 276
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 146/269 (54%), Gaps = 15/269 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P ++ + E +G GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
+PNIV YL + D L +++E++ GGS++ ++ + E I ++ L
Sbjct: 74 NK----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LE+LH N ++HRDIK NIL+ G +KL DFG ++ + +M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPE 186
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI--PEHLSM 299
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+DFL +CL + R +A ELLQH F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 146/269 (54%), Gaps = 15/269 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P ++ + E +G GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
+PNIV YL + D L +++E++ GGS++ ++ + E I ++ L
Sbjct: 74 NK----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LE+LH N ++HRDIK NIL+ G +KL DFG ++ + M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPE 186
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI--PEHLSM 299
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+DFL +CL+ + R +A ELLQH F+
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 145/269 (53%), Gaps = 15/269 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P ++ + E +G GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 73
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
+PNIV YL + D L +++E++ GGS++ ++ + E I ++ L
Sbjct: 74 NK----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LE+LH N ++HRDIK NIL+ G +KL DFG ++ + M GTPYWMAPE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSEMVGTPYWMAPE 186
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI--PEHLSM 299
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 244
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+DFL +CL + R +A ELLQH F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 146/269 (54%), Gaps = 15/269 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P ++ + E +G GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 74
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
+PNIV YL + D L +++E++ GGS++ ++ + E I ++ L
Sbjct: 75 NK----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LE+LH N ++HRDIK NIL+ G +KL DFG ++ + M GTPYWMAPE
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPE 187
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI--PEHLSM 299
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 245
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+DFL +CL+ + R +A EL+QH F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 147/269 (54%), Gaps = 15/269 (5%)
Query: 62 PPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
P ++ + E +G GA G VY M++ +G+ +A++Q+ N + K + I
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRE 74
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
+PNIV YL + D L +++E++ GGS++ ++ + E I ++ L
Sbjct: 75 NK----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LE+LH N ++HR+IK NIL+ G +KL DFG ++ + +M GTPYWMAPE
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPE 187
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI--PEHLSM 299
V+ + + DIWS+G IEM G+PP+ + + AL+ I T + P + PE LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGT-PELQNPEKLSA 245
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+DFL +CL+ + R +A EL+QH F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 24/272 (8%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
ELVG G +G+VY G ++ +G+L A+K + + + + K + ++ H
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM--------LKKYSHHR 81
Query: 130 NIVRYLGTARE------DDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLG 181
NI Y G + DD L +++EF GS++ L+ K + E I +++L G
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
L +LH++ ++HRDIKG N+L+ +KL DFG S ++ T+ + GTPYWMAPE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPE 199
Query: 242 VIL-----QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
VI + F +D+WS+G T IEMA G PP + ALF I + +
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC-DMHPMRALFLIPRNPAPRLKSKK 258
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S + + F+ CL K R +L++HPF+
Sbjct: 259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 142/281 (50%), Gaps = 34/281 (12%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G GA V E +A+K++ + EK Q + HP
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINL-------EKCQTSMDELLKEIQAMSQCHHP 73
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLG--------KFGSFPESVIRMYTKQLLLG 181
NIV Y + D L ++++ + GGS+ ++ K G ES I +++L G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK---GTPYWM 238
LEYLHKNG +HRD+K NIL+ G +++ADFG S + I K K GTP WM
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 239 APEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL 297
APEV+ Q G+ F ADIWS G T IE+ATG P+ ++ + L + T ++ PP E
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVL--MLTLQNDPPSLE-T 249
Query: 298 SMEAKDFLLK-----------CLQKEPYLRSTASELLQHPF 327
++ K+ L K CLQK+P R TA+ELL+H F
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 142/281 (50%), Gaps = 34/281 (12%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G GA V E +A+K++ + EK Q + HP
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRI-------NLEKCQTSMDELLKEIQAMSQCHHP 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLG--------KFGSFPESVIRMYTKQLLLG 181
NIV Y + D L ++++ + GGS+ ++ K G ES I +++L G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK---GTPYWM 238
LEYLHKNG +HRD+K NIL+ G +++ADFG S + I K K GTP WM
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 239 APEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL 297
APEV+ Q G+ F ADIWS G T IE+ATG P+ ++ + L + T ++ PP E
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVL--MLTLQNDPPSLE-T 244
Query: 298 SMEAKDFLLK-----------CLQKEPYLRSTASELLQHPF 327
++ K+ L K CLQK+P R TA+ELL+H F
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 48 PAVPALPPIEKTDAPPI------RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA 101
P VP P +K P + +R + +G G F VY L G +A+K+V I
Sbjct: 11 PPVPQFQP-QKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD 69
Query: 102 NSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG 161
+K + HPN+++Y + ED+ LNI+LE G +S ++
Sbjct: 70 LMDAKARADC-----IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
Query: 162 KFGS----FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
F PE + Y QL LE++H +MHRDIK AN+ + G +KL D G +
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
Query: 218 KVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQE 277
T A S+ GTPY+M+PE I + G++F +DIWS+GC + EMA + P+
Sbjct: 185 FFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242
Query: 278 VAALFHIGTTKSHPPIP-EHLSMEAKDFLLKCLQKEP 313
+ +L +PP+P +H S E + + C+ +P
Sbjct: 243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV----LIAANSASKEKTQAHIRXXXXXX 120
R+ +G +G G F + Y ++D+ E+ A K V L+ + K T+ I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
+P++V + G +DD + ++LE S+ L + + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWM 238
G++YLH N ++HRD+K N+ +++ +K+ DFG + K+ +G K++ GTP ++
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKTLCGTPNYI 209
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS 298
APEV+ + GHSF DIWS+GC + + GKPP+ + +I K+ +P H++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHIN 266
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
A + + L +P LR + +ELL F T Y
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 22/274 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV----LIAANSASKEKTQAHIRXXXXXX 120
R+ +G +G G F + Y ++D+ E+ A K V L+ + K T+ I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
+P++V + G +DD + ++LE S+ L + + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWM 238
G++YLH N ++HRD+K N+ +++ +K+ DFG + K+ +G K + GTP ++
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKDLCGTPNYI 209
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS 298
APEV+ + GHSF DIWS+GC + + GKPP+ + +I K+ +P H++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHIN 266
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
A + + L +P LR + +ELL F T Y
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 22/274 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV----LIAANSASKEKTQAHIRXXXXXX 120
R+ +G +G G F + Y ++D+ E+ A K V L+ + K T+ I
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 83
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
+P++V + G +DD + ++LE S+ L + + E R + +Q +
Sbjct: 84 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 137
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWM 238
G++YLH N ++HRD+K N+ +++ +K+ DFG + K+ +G K + GTP ++
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKDLCGTPNYI 193
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS 298
APEV+ + GHSF DIWS+GC + + GKPP+ + +I K+ +P H++
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHIN 250
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
A + + L +P LR + +ELL F T Y
Sbjct: 251 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 284
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 133/260 (51%), Gaps = 15/260 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG VY ++ + E++A+K++ + S EK Q I+ HPN
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKL----RHPNT 116
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++Y G + + +++E+ G + L E I T L GL YLH + ++
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL---QTGH 248
HRD+K NIL+ G +KL DFG++ + + A GTPYWMAPEVIL + +
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 249 SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS+G T IE+A KPP ++AL+HI +S H S ++F+ C
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 289
Query: 309 LQKEPYLRSTASELLQHPFV 328
LQK P R T+ LL+H FV
Sbjct: 290 LQKIPQDRPTSEVLLKHRFV 309
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 22/274 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV----LIAANSASKEKTQAHIRXXXXXX 120
R+ +G +G G F + Y ++D+ E+ A K V L+ + K T+ I
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
+P++V + G +DD + ++LE S+ L + + E R + +Q +
Sbjct: 100 ------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWM 238
G++YLH N ++HRD+K N+ +++ +K+ DFG + K+ +G K + GTP ++
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKXLCGTPNYI 209
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS 298
APEV+ + GHSF DIWS+GC + + GKPP+ + +I K+ +P H++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET---YIRIKKNEYSVPRHIN 266
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
A + + L +P LR + +ELL F T Y
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 133/260 (51%), Gaps = 15/260 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG VY ++ + E++A+K++ + S EK Q I+ HPN
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKL----RHPNT 77
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++Y G + + +++E+ G + L E I T L GL YLH + ++
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL---QTGH 248
HRD+K NIL+ G +KL DFG++ + + A GTPYWMAPEVIL + +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 249 SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS+G T IE+A KPP ++AL+HI +S H S ++F+ C
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 250
Query: 309 LQKEPYLRSTASELLQHPFV 328
LQK P R T+ LL+H FV
Sbjct: 251 LQKIPQDRPTSEVLLKHRFV 270
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Query: 61 APPIRWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXX 117
A P + +++G G+FG+V++ + DSG L A+K VL A +++ + +
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDI 83
Query: 118 XXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
HP +V+ + + L ++L+F+ GG + + L K F E ++ Y +
Sbjct: 84 LADV-----NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
L LGL++LH GI++RD+K NIL+D +G IKL DFG SK+ ++ A S GT +
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE--KKAYSFCGTVEY 196
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEH 296
MAPEV+ + GHS SAD WS G + EM TG P+ + +E L K+ +P+
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL----ILKAKLGMPQF 252
Query: 297 LSMEAKDFLLKCLQKEPYLR-----STASELLQHPFVT 329
LS EA+ L ++ P R A E+ +H F +
Sbjct: 253 LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYS 290
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 144/269 (53%), Gaps = 15/269 (5%)
Query: 70 ELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
+++G GA+G+V++ + D+G+L A+K VL A K KT H R
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMK-VLKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
P +V + + L+++L+++ GG + + L + F E +++Y +++L LE+LH
Sbjct: 119 --PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL-- 244
K GI++RDIK NIL+D+ G + L DFG SK+ V T A GT +MAP+++
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGG 235
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVA-ALFHIGTTKSHPPIPEHLSMEAKD 303
+GH + D WS+G + E+ TG P++ ++ + A KS PP P+ +S AKD
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKD 295
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
+ + L K+P R A E+ +H F
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G IK+ADFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 18/266 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 80
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K++ GTP ++APEV+ +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLL 306
GHSF D+WS+GC + + GKPP+ + ++ K+ IP+H++ A +
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQ 253
Query: 307 KCLQKEPYLRSTASELLQHPFVTGKY 332
K LQ +P R T +ELL F T Y
Sbjct: 254 KMLQTDPTARPTINELLNDEFFTSGY 279
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 22/268 (8%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 76
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K++ GTP ++APEV+ +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAAL--FHIGTTKSHPPIPEHLSMEAKDF 304
GHSF D+WS+GC + + GKPP+ E + L ++ K+ IP+H++ A
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIKKNEYSIPKHINPVAASL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKY 332
+ K LQ +P R T +ELL F T Y
Sbjct: 248 IQKMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 18/266 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 76
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K++ GTP ++APEV+ +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLL 306
GHSF D+WS+GC + + GKPP+ + ++ K+ IP+H++ A +
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQ 249
Query: 307 KCLQKEPYLRSTASELLQHPFVTGKY 332
K LQ +P R T +ELL F T Y
Sbjct: 250 KMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E++PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G IK+ADFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E++PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G IK+ADFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 18/266 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 98
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K + GTP ++APEV+ +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLL 306
GHSF D+WS+GC + + GKPP+ + ++ K+ IP+H++ A +
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQ 271
Query: 307 KCLQKEPYLRSTASELLQHPFVTGKY 332
K LQ +P R T +ELL F T Y
Sbjct: 272 KMLQTDPTARPTINELLNDEFFTSGY 297
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 18/266 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 100
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K + GTP ++APEV+ +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLL 306
GHSF D+WS+GC + + GKPP+ + ++ K+ IP+H++ A +
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQ 273
Query: 307 KCLQKEPYLRSTASELLQHPFVTGKY 332
K LQ +P R T +ELL F T Y
Sbjct: 274 KMLQTDPTARPTINELLNDEFFTSGY 299
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 22/268 (8%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV--LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G G F + + + D+ E+ A K V + +EK I H
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-------SIHRSLAH 74
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++V + G ++D + ++LE S+ L + + E R Y +Q++LG +YLH+N
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQT 246
++HRD+K N+ ++ +K+ DFG + KV +G K + GTP ++APEV+ +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAAL--FHIGTTKSHPPIPEHLSMEAKDF 304
GHSF D+WS+GC + + GKPP+ E + L ++ K+ IP+H++ A
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIKKNEYSIPKHINPVAASL 245
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKY 332
+ K LQ +P R T +ELL F T Y
Sbjct: 246 IQKMLQTDPTARPTINELLNDEFFTSGY 273
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V ++ GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH-K 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 198
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPP--IPEHL-SMEAKDF 304
+S +DIWS+G +++EMA G+ P +A + + PP +P + S+E +DF
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 305 LLKCLQKEPYLRSTASELLQHPFV 328
+ KCL K P R+ +L+ H F+
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFI 282
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 89
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 90 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 149
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V ++ GTP ++APE+IL G++ +
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 205 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 260
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRIQQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L ++LE+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G IK+ADFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKEIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 9/204 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N+V + + L +L+EF+ GG+++ ++ + E I + +L L YLH
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHA 159
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
G++HRDIK +IL+ G +KL+DFG ++ + + K + GTPYWMAPEVI ++
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK--DVPKRKXLVGTPYWMAPEVISRSL 217
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH---LSMEAKDF 304
++ DIWS+G VIEM G+PP+ F + S PP ++ +S +DF
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPY---FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDF 274
Query: 305 LLKCLQKEPYLRSTASELLQHPFV 328
L + L ++P R+TA ELL HPF+
Sbjct: 275 LERMLVRDPQERATAQELLDHPFL 298
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 210
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 384
Query: 309 LQKEPYLRSTASELLQHPFV 328
L ++P R+TA+ELL+HPF+
Sbjct: 385 LVRDPAQRATAAELLKHPFL 404
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 96
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 212 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 96
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 212 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 15/240 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 124
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAK-SMKGTPYWMAPEVILQTGHSF 250
+RD+K N+L+D +G I++ DFG +K+V GA ++ GTP ++APE+IL G++
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV------KGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 251 SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
+ D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 124
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+VPGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 240 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 14/210 (6%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 248 HSFSADIWSVGCTVIEMATGK-----PPWSQQFQEVAALFHIGTTKSHPPIPEH----LS 298
+S +DIWS+G +++EMA G+ P + + A+F + + P P+ S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+E +DF+ KCL K P R+ +L+ H F+
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKEIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 144/274 (52%), Gaps = 18/274 (6%)
Query: 71 LVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
++G G +G+V+ + ++G++ A+K VL A K AH +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEEVK--- 79
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP IV + + L ++LE++ GG + L + G F E Y ++ + L +LH+
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
GI++RD+K NI+++++G +KL DFG K+ + T+ + GT +MAPE+++++G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HTFCGTIEYMAPEILMRSG 197
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLK 307
H+ + D WS+G + +M TG PP++ + ++ K +P +L+ EA+D L K
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLPPYLTQEARDLLKK 254
Query: 308 CLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRN 341
L+ R+ AS L P G+ Q HP FR+
Sbjct: 255 LLK-----RNAASRLGAGPGDAGEVQ-AHPFFRH 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 133
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 251 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 307
Query: 309 LQKEPYLRSTASELLQHPFVT 329
L ++P R+TA+ELL+HPF+
Sbjct: 308 LVRDPAQRATAAELLKHPFLA 328
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLAGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 90
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 208 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 264
Query: 309 LQKEPYLRSTASELLQHPFVT 329
L ++P R+TA+ELL+HPF+
Sbjct: 265 LVRDPAQRATAAELLKHPFLA 285
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Query: 61 APPIRWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXX 117
A P ++ +++G G+FG+V++ + D+ +L A+K VL A +++ + +
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDI 79
Query: 118 XXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
HP IV+ + + L ++L+F+ GG + + L K F E ++ Y +
Sbjct: 80 LVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
L L L++LH GI++RD+K NIL+D +G IKL DFG SK+ ++ A S GT +
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEY 192
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEH 296
MAPEV+ + GH+ SAD WS G + EM TG P+ + +E + K+ +P+
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKAKLGMPQF 248
Query: 297 LSMEAKDFLLKCLQKEPYLRSTA-----SELLQHPFVT 329
LS EA+ L ++ P R A E+ +H F +
Sbjct: 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ A GT +M+PE + T
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQGTH 182
Query: 248 HSFSADIWSVGCTVIEMATG---KPPWSQQFQEVAALFHIGTTKSHPPIPEHL-SMEAKD 303
+S +DIWS+G +++EMA G +PP + + L + P +P + S+E +D
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMA-----IFELLDYIVNEPPPKLPSAVFSLEFQD 237
Query: 304 FLLKCLQKEPYLRSTASELLQHPFV 328
F+ KCL K P R+ +L+ H F+
Sbjct: 238 FVNKCLIKNPAERADLKQLMVHAFI 262
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 88
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 206 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 262
Query: 309 LQKEPYLRSTASELLQHPFVT 329
L ++P R+TA+ELL+HPF+
Sbjct: 263 LVRDPAQRATAAELLKHPFLA 283
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + ++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
+ + +++ +L +++E+ PGG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G IK+ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + ++++G A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 18/274 (6%)
Query: 71 LVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
++G G +G+V+ + ++G++ A+K VL A K AH +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEEVK--- 79
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP IV + + L ++LE++ GG + L + G F E Y ++ + L +LH+
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
GI++RD+K NI+++++G +KL DFG K+ + T+ GT +MAPE+++++G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HXFCGTIEYMAPEILMRSG 197
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLK 307
H+ + D WS+G + +M TG PP++ + ++ K +P +L+ EA+D L K
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLPPYLTQEARDLLKK 254
Query: 308 CLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRN 341
L+ R+ AS L P G+ Q HP FR+
Sbjct: 255 LLK-----RNAASRLGAGPGDAGEVQ-AHPFFRH 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Query: 61 APPIRWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXX 117
A P ++ +++G G+FG+V++ + D+ +L A+K VL A +++ + +
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDI 79
Query: 118 XXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
HP IV+ + + L ++L+F+ GG + + L K F E ++ Y +
Sbjct: 80 LVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
L L L++LH GI++RD+K NIL+D +G IKL DFG SK+ ++ A S GT +
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEY 192
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEH 296
MAPEV+ + GH+ SAD WS G + EM TG P+ + +E + K+ +P+
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKAKLGMPQF 248
Query: 297 LSMEAKDFLLKCLQKEPYLRSTA-----SELLQHPFVT 329
LS EA+ L ++ P R A E+ +H F +
Sbjct: 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Query: 61 APPIRWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXX 117
A P ++ +++G G+FG+V++ + D+ +L A+K VL A +++ + +
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDI 80
Query: 118 XXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
HP IV+ + + L ++L+F+ GG + + L K F E ++ Y +
Sbjct: 81 LVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
L L L++LH GI++RD+K NIL+D +G IKL DFG SK+ ++ A S GT +
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEY 193
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEH 296
MAPEV+ + GH+ SAD WS G + EM TG P+ + +E + K+ +P+
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKAKLGMPQF 249
Query: 297 LSMEAKDFLLKCLQKEPYLRSTA-----SELLQHPFVT 329
LS EA+ L ++ P R A E+ +H F +
Sbjct: 250 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 287
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 104
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 220 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 79
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 197 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 253
Query: 309 LQKEPYLRSTASELLQHPFVT 329
L ++P R+TA+ELL+HPF+
Sbjct: 254 LVRDPAQRATAAELLKHPFLA 274
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+ G V + SG+L+AVK++ + + Q H N+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDL--------RKQQRRELLFNEVVIMRDYQHENV 83
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V + D L +++EF+ GG+++ ++ E I +L L LH G++
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK +IL+ + G +KL+DFG +V + + K + GTPYWMAPE+I + +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDFLLKC 308
DIWS+G VIEM G+PP+ F E + PP ++L S K FL +
Sbjct: 201 VDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 257
Query: 309 LQKEPYLRSTASELLQHPFVT 329
L ++P R+TA+ELL+HPF+
Sbjct: 258 LVRDPAQRATAAELLKHPFLA 278
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 98
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 99 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 214 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 269
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 90
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 91 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 150
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 206 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 124
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 240 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 18/262 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVL--IAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+++G G+FG+V++ + + A+K + + E T R
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW------E 77
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP + T + ++L ++E++ GG + + F S Y +++LGL++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK--GTPYWMAPEVILQ 245
GI++RD+K NIL+D G IK+ADFG K+ + AK+ + GTP ++APE++L
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKE----NMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
++ S D WS G + EM G+ P+ Q +E LFH +P P L EAKD L
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH-SIRMDNPFYPRWLEKEAKDLL 250
Query: 306 LKCLQKEPYLR-STASELLQHP 326
+K +EP R ++ QHP
Sbjct: 251 VKLFVREPEKRLGVRGDIRQHP 272
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N+V + D L +++EF+ GG+++ ++ E I +L L YLH
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHN 159
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
G++HRDIK +IL+ + G IKL+DFG +V + + K + GTPYWMAPEVI +
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKXLVGTPYWMAPEVISRLP 217
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL---SMEAKDF 304
+ DIWS+G VIEM G+PP+ F E S PP + L S + F
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPY---FNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGF 274
Query: 305 LLKCLQKEPYLRSTASELLQHPFV 328
L L +EP R+TA ELL HPF+
Sbjct: 275 LDLMLVREPSQRATAQELLGHPFL 298
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVL--IAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+++G G+FG+V++ + + A+K + + E T R
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW------E 76
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP + T + ++L ++E++ GG + + F S Y +++LGL++LH
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKS--MKGTPYWMAPEVILQ 245
GI++RD+K NIL+D G IK+ADFG K+ + AK+ GTP ++APE++L
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKE----NMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
++ S D WS G + EM G+ P+ Q +E LFH +P P L EAKD L
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH-SIRMDNPFYPRWLEKEAKDLL 249
Query: 306 LKCLQKEPYLR-STASELLQHP 326
+K +EP R ++ QHP
Sbjct: 250 VKLFVREPEKRLGVRGDIRQHP 271
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + +MA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYQMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+++D +G I++ DFG +K+V + GTP ++APE+I+ G++ +
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP ++AP +IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPAIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV + + +SG A+K ++ K K H P +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEH---TLNEKRILQAVNFPFL 103
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V+ + +++ +L +++E+V GG + S L + G F E R Y Q++L EYLH ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K N+L+D +G I++ DFG +K+V + GTP +APE+IL G++ +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEALAPEIILSKGYNKA 218
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQ 310
D W++G + EMA G PP+ F + + P H S + KD L LQ
Sbjct: 219 VDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 12/266 (4%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G GAF V +N ++G+ AVK V +A ++S + ++ HP
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+IV L T D L ++ EF+ G + + K + E+V Y +Q+L L Y
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 186 HKNGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
H N I+HRD+K N+L+ +N +KL DFG + ++ E + G + GTP++MAPEV
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV--GTPHFMAPEV 204
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D+W G + + +G P+ + + G K +P H+S AK
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
D + + L +P R T E L HP++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 92
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 93 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 201
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 257
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 83
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 84 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 192
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 248
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 249 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 67
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 68 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCH----APSSRRTTLSGTLDYLPP 176
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 232
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 140/269 (52%), Gaps = 12/269 (4%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ + + +G G+FG+ + + + G +K++ I+ S SKE+ ++
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESR-----REVAVLA 78
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGL 182
HPNIV+Y + E+ SL I++++ GG + + K F E I + Q+ L L
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+++H I+HRDIK NI + G ++L DFG ++ V +T+ A++ GTPY+++PE+
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSPEI 196
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +DIW++GC + E+ T K + + L I + S PP+ H S + +
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII--SGSFPPVSLHYSYDLR 254
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ + ++ P R + + +L+ F+ +
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 92
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 93 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDDLCGTLDYLPP 201
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 257
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 71
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G + L K F E Y +L
Sbjct: 72 -------HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLXGTLDYLPP 180
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 71
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 72 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 180
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 71
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G + L K F E Y +L
Sbjct: 72 -------HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 180
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 67
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 68 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDTLCGTLDYLPP 176
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 232
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 71
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 72 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 180
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 237 GARDLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FGRV++ + +G A+K ++ + K H THP I
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMK--VLKKEIVVRLKQVEH---TNDERLMLSIVTHPFI 68
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
+R GT ++ + ++++++ GG + SLL K FP V + Y ++ L LEYLH I+
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDII 128
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
+RD+K NIL+D G IK+ DFG +K V ++ + GTP ++APEV+ ++ S
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-----XLCGTPDYIAPEVVSTKPYNKS 183
Query: 252 ADIWSVGCTVIEMATGKPPW 271
D WS G + EM G P+
Sbjct: 184 IDWWSFGILIYEMLAGYTPF 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 68
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 69 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPP 177
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 233
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 65
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 66 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 118
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 174
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 230
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 231 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 67
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 68 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPP 176
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 232
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTELCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ +S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRAALCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +Q+ + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 71
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 72 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPP 180
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTDLCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 70
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 71 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 123
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 179
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 235
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 236 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRDDLCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 129/271 (47%), Gaps = 30/271 (11%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
A+D + + L+ P R E+L+HP++T
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 135/269 (50%), Gaps = 19/269 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV----LIAANSASKEKTQAHIRXXXXXXX 121
++ G L+G G+F VY ++ +G +A+K + + A + + + I
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK--- 69
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLL 180
HP+I+ + + + ++LE G ++ L + F E+ R + Q++
Sbjct: 70 ------HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT 123
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
G+ YLH +GI+HRD+ +N+L+ IK+ADFG + ++ ++ GTP +++P
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--MPHEKHYTLCGTPNYISP 181
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
E+ ++ H +D+WS+GC + G+PP+ V + + +P LS+E
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT--DTVKNTLN-KVVLADYEMPSFLSIE 238
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVT 329
AKD + + L++ P R + S +L HPF++
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 66
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 67 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTXLCGTLDYLPP 175
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 231
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 68
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 69 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+A+FG S A + ++ GT ++ P
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSSRRTTLCGTLDYLPP 177
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 233
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 30/271 (11%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + + GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRXXLCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
A+D + + L+ P R E+L+HP++T
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + A + +E + Q+H+R
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 69
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 70 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+A+FG S A + ++ GT ++ P
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSSRRTTLCGTLDYLPP 178
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 234
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ P R E+L+HP++T P
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 241
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 361
Query: 327 FV 328
F+
Sbjct: 362 FI 363
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 30/271 (11%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA-------NSASKE-KTQAHIRXXXXXX 120
G +G G FG VY+ +LA+K + A + +E + Q+H+R
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------ 63
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 64 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 116
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 172
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E GKPP+ + +QE + ++ P+ ++
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFPDFVTE 228
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
A+D + + L+ P R E+L+HP++T
Sbjct: 229 GARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 327 FV 328
F+
Sbjct: 300 FI 301
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 327 FV 328
F+
Sbjct: 300 FI 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A S GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 260
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 206
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326
Query: 327 FV 328
F+
Sbjct: 327 FI 328
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 327 FV 328
F+
Sbjct: 300 FI 301
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 46/242 (19%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L K G PE ++ + ++ GL YL K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +M+PE + T
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 179
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV------------------------- 278
+S +DIWS+G +++EMA G+ PP +++ + +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 279 --------AALFHIGTTKSHPPIPEH----LSMEAKDFLLKCLQKEPYLRSTASELLQHP 326
A+F + + P P+ S+E +DF+ KCL K P R+ +L+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 327 FV 328
F+
Sbjct: 300 FI 301
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 64
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K+ GTP ++APEV+
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKTFCGTPEYLAPEVL 180
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 237
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K+ GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKTFCGTPEYLAPEVL 177
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 234
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K+ GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKTFCGTPEYLAPEVL 177
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 234
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 89
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A S GT +++PE++ +
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 261
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 312
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKXFCGTPEYLAPEVL 177
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 234
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKXFCGTPEYLAPEVL 177
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 234
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 66
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K GTP ++APEV+
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKXFCGTPEYLAPEVL 182
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 239
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 27/269 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V+IA + + T++ +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV---------LQN 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + D L ++E+ GG + L + F E R Y +++ LEYL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVI 243
H +++RDIK N+++D G IK+ DFG K+ + +GA K GTP ++APEV+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS----DGATMKXFCGTPEYLAPEVL 177
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D W +G + EM G+ P+ Q E LF + P LS EAK
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL-ILMEEIRFPRTLSPEAKS 234
Query: 304 FLLKCLQKEPYLR-----STASELLQHPF 327
L L+K+P R S A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 23/299 (7%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDV 63
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGL 182
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ L
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 123
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
EYLH GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE+
Sbjct: 124 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHL 297
+ + S+D+W++GC + ++ G PP+ FQ++ L + PE
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKF 235
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
+A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 236 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 289
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 23/299 (7%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDV 60
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGL 182
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ L
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 120
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
EYLH GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE+
Sbjct: 121 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHL 297
+ + S+D+W++GC + ++ G PP+ FQ++ L + PE
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKF 232
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
+A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 233 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 286
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVL--------IAANSASKEKTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + + + + Q+H+R
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR------ 70
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 71 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSRRDTLCGTLDYLPP 179
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E G PP+ + +QE + ++ P+ ++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET----YRRISRVEFTFPDFVTE 235
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ R T +E+L+HP++ P
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 138/271 (50%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++GR G++L K++ + T+A + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKHPNI 67
Query: 132 VRYLG--TAREDDSLNILLEFVPGGSISSLLGKFGSFP------ESVIRMYTKQLLLGLE 183
VRY R + +L I++E+ GG ++S++ K G+ E V+R+ T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMT-QLTLALK 125
Query: 184 YLHK-----NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWM 238
H+ + ++HRD+K AN+ +D K +KL DFG ++ + + AK+ GTPY+M
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYM 183
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHL 297
+PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRY 240
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S E + + + L + Y R + E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 23/298 (7%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDV 61
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGL 182
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ L
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 121
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
EYLH GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE+
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHL 297
+ + S+D+W++GC + ++ G PP+ FQ++ L + PE
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKF 233
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGM 355
+A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 234 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKL 286
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 30/276 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVL--------IAANSASKEKTQAHIRXXXXXX 120
G +G G FG VY+ S +LA+K + + + + Q+H+R
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR------ 70
Query: 121 XXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
HPNI+R G + + ++LE+ P G++ L K F E Y +L
Sbjct: 71 -------HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
L Y H ++HRDIK N+L+ + G +K+ADFG S A + ++ GT ++ P
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSRRTTLCGTLDYLPP 179
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E+I H D+WS+G E G PP+ + +QE + ++ P+ ++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET----YRRISRVEFTFPDFVTE 235
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
A+D + + L+ R T +E+L+HP++ P
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 85
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A S GT +++PE++ +
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 257
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 308
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 138/271 (50%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++GR G++L K++ + T+A + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKHPNI 67
Query: 132 VRYLG--TAREDDSLNILLEFVPGGSISSLLGKFGSFP------ESVIRMYTKQLLLGLE 183
VRY R + +L I++E+ GG ++S++ K G+ E V+R+ T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMT-QLTLALK 125
Query: 184 YLHK-----NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWM 238
H+ + ++HRD+K AN+ +D K +KL DFG ++ + + AK+ GTPY+M
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKAFVGTPYYM 183
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHL 297
+PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRY 240
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S E + + + L + Y R + E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A + GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 309
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P ++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDV 62
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGL 182
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ L
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 122
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
EYLH GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE+
Sbjct: 123 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHL 297
+ + S+D+W++GC + ++ G PP+ FQ++ L + PE
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKF 234
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
+A+D + K L + R E+ + + HP F + E+ +Q P
Sbjct: 235 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPP 285
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S+D+W++GC + ++ G PP+ + L K PE +A+D +
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAKIIKLEYDFPEKFFPKARDLV 265
Query: 306 LKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
K L + R E+ + + HP F + E+ +Q P +
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S+D+W++GC + ++ G PP+ + L K PE +A+D +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAKIIKLEYDFPEKFFPKARDLV 265
Query: 306 LKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
K L + R E+ + + HP F + E+ +Q P +
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 89
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 261
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 312
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 260
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 309
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 309
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+
Sbjct: 213 HPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 188 NGIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
NGI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLV 328
Query: 245 QT---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSM 299
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
+A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALP 440
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 12/266 (4%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G F V +N ++G+ AVK V +A ++S + ++ HP
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 88
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+IV L T D L ++ EF+ G + + K + E+V Y +Q+L L Y
Sbjct: 89 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 186 HKNGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
H N I+HRD+K +L+ +N +KL FG + ++ E + G + GTP++MAPEV
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEV 206
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D+W G + + +G P+ + + G K +P H+S AK
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 266
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
D + + L +P R T E L HP++
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 260
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 260
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 311
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G GA G V + + + +A+K + A SA + ++ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NH 74
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+N
Sbjct: 75 PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 189 GIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
GI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVS 190
Query: 246 T---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSME 300
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S +
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTAKP 301
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 32/282 (11%)
Query: 53 LPPIEKTDAPPIRWRKGEL-VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQA 111
L P++ + W +L +G G+FG V+ + +G AVK+V + A + A
Sbjct: 81 LKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACA 140
Query: 112 HIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI 171
+ T P IV G RE +NI +E + GGS+ L+ + G PE
Sbjct: 141 GL-------------TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA 187
Query: 172 RMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC-IKLADFGASKKVVELATINGAKS 230
Y Q L GLEYLH I+H D+K N+L+ + G L DFG V L KS
Sbjct: 188 LYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG---HAVCLQPDGLGKS 244
Query: 231 M------KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI 284
+ GT MAPEV+L D+WS C ++ M G PW+Q F+ L
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL--- 301
Query: 285 GTTKSHPP----IPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
S PP IP + + + L+KEP R +A+EL
Sbjct: 302 -KIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G GA G V + + + +A+K + A SA + ++ H
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NH 73
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+N
Sbjct: 74 PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 132
Query: 189 GIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
GI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVS 189
Query: 246 T---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSME 300
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S +
Sbjct: 190 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 249
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALP 300
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G GA G V + + + +A+K + A SA + ++ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NH 74
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+N
Sbjct: 75 PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 189 GIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
GI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVS 190
Query: 246 T---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSME 300
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S +
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALP 301
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G GA G V + + + +A+K + A SA + ++ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NH 74
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+N
Sbjct: 75 PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 189 GIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
GI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVS 190
Query: 246 T---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSME 300
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S +
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALP 301
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+G GA G V + + + +A+K + A SA + ++ H
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NH 80
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+N
Sbjct: 81 PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 139
Query: 189 GIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
GI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVS 196
Query: 246 T---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSME 300
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S +
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 256
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATP 353
A D + K L +P R T E L+HP++ +D F++ + E A P
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALP 307
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 12/266 (4%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G F V +N ++G+ AVK V +A ++S + ++ HP
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+IV L T D L ++ EF+ G + + K + E+V Y +Q+L L Y
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 186 HKNGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
H N I+HRD+K +L+ +N +KL FG + ++ E + G + GTP++MAPEV
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEV 204
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D+W G + + +G P+ + + G K +P H+S AK
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
D + + L +P R T E L HP++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++GR G++L K++ + T+A + HPNI
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKHPNI 67
Query: 132 VRYLG--TAREDDSLNILLEFVPGGSISSLLGKFGSFP------ESVIRMYTKQLLLGLE 183
VRY R + +L I++E+ GG ++S++ K G+ E V+R+ T QL L L+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMT-QLTLALK 125
Query: 184 YLHK-----NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWM 238
H+ + ++HRD+K AN+ +D K +KL DFG ++ + AK GTPY+M
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF--AKEFVGTPYYM 183
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHL 297
+PE + + ++ +DIWS+GC + E+ PP++ Q E+A G + IP
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRY 240
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S E + + + L + Y R + E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 23/295 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 70
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 242
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGM 355
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 243 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKL 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLI--AANSASKEKTQAHIRXXXXXXXXXXXXT 127
E++G GAF V++ +G+L A+K + A +S E A ++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK---------- 64
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H NIV ++++ V GG + + + G + E + +Q+L ++YLH+
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 188 NGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVI 243
NGI+HRD+K N+L + I + DFG SK NG S GTP ++APEV+
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-----MEQNGIMSTACGTPGYVAPEVL 179
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLS 298
Q +S + D WS+G + G PP+ S+ F+++ G + P + +S
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE----GYYEFESPFWDDIS 235
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK---YQDPHP 337
AKDF+ L+K+P R T + L HP++ G ++D +P
Sbjct: 236 ESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYP 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 85
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 257
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 308
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 17/272 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G+FG V + + + AVK +I SA + T +R HPN
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK--VINKASAKNKDTSTILREVELLKKL----DHPN 82
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I++ + S I+ E GG + + K F E KQ+ G+ Y+HK+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 191 MHRDIKGANILVDN--KGC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV L+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEV-LRGT 198
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKDFL 305
+ D+WS G + + +G PP+ + E L + T K +P+ +S +AKD +
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 306 LKCLQKEPYLRSTASELLQHPFVTGKYQDPHP 337
K L P LR TA++ L+HP++ KY P
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQ-KYSSETP 288
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 138/311 (44%), Gaps = 47/311 (15%)
Query: 53 LPPIEKTDAPPIRWRKGEL-VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQA 111
L P++ + W +L +G G+FG V+ + +G AVK+V + A + A
Sbjct: 62 LKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACA 121
Query: 112 HIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI 171
+ T P IV G RE +NI +E + GGS+ L+ + G PE
Sbjct: 122 GL-------------TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA 168
Query: 172 RMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC-IKLADFGASKKVVELATINGAKS 230
Y Q L GLEYLH I+H D+K N+L+ + G L DFG + V L K
Sbjct: 169 LYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA---VCLQPDGLGKD 225
Query: 231 M------KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI 284
+ GT MAPEV+L D+WS C ++ M G PW+Q F+ L
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL--- 282
Query: 285 GTTKSHPP----IPEHLSMEAKDFLLKCLQKEPYLRSTASEL-------------LQHPF 327
S PP IP + + + L+KEP R +A+EL L+ P+
Sbjct: 283 -KIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPW 341
Query: 328 VTGKYQDP-HP 337
G+Y++P HP
Sbjct: 342 -RGEYKEPRHP 351
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP I++ +D I+LE + GG + + E+ ++Y Q+LL ++YLH+
Sbjct: 199 HPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 188 NGIMHRDIKGANILVDNK--GC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
NGI+HRD+K N+L+ ++ C IK+ DFG SK + E + + +++ GTP ++APEV++
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLV 314
Query: 245 QT---GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSM 299
G++ + D WS+G + +G PP+S+ +V+ I + K + P + +S
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTG-----KYQD 334
+A D + K L +P R T E L+HP++ K+QD
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 414
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F + L + A+K ++ KE ++
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 309
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 12/262 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY+ + ++A+K ++ + KE + +R H
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEIQSHL---RH 74
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
PNI+R + + ++LEF P G + L K G F E + ++L L Y H+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTH 190
Query: 249 SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+W G E G PP+ + PP LS +KD + K
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKL 247
Query: 309 LQKEPYLRSTASELLQHPFVTG 330
L+ P R +++HP+V
Sbjct: 248 LRYHPPQRLPLKGVMEHPWVKA 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 93
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGTTKSHPPIPEHLSME 300
S+D+W++GC + ++ G PP+ FQ++ L + PE +
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--------DFPEKFFPK 265
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMN 356
A+D + K L + R E+ + + HP F + E+ +Q P +
Sbjct: 266 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-----HPFFESVTWENLHQQTPPKLT 316
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G V ++ SG+++AVK++ NS Q R P
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS------QEQKRLLMDLDISMRTVDCPFT 112
Query: 132 VRYLGTAREDDSLNILLEFVPGG---SISSLLGKFGSFPESVIRMYTKQLLLGLEYLH-K 187
V + G + + I +E + ++ K + PE ++ ++ LE+LH K
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVI--- 243
++HRD+K +N+L++ G +K+ DFG S +V+ + AK++ G +MAPE I
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPE 228
Query: 244 -LQTGHSFSADIWSVGCTVIEMATGKPP---WSQQFQEVAALFHIGTTKSHPPIP-EHLS 298
Q G+S +DIWS+G T+IE+A + P W FQ++ + + P +P + S
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFS 284
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
E DF +CL+K R T EL+QHPF T
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 12/262 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY+ + ++A+K ++ + KE + +R H
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEIQSHL---RH 73
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
PNI+R + + ++LEF P G + L K G F E + ++L L Y H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTH 189
Query: 249 SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+W G E G PP+ + PP LS +KD + K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKL 246
Query: 309 LQKEPYLRSTASELLQHPFVTG 330
L+ P R +++HP+V
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKA 268
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++ G+++G G+F V + L + A+K ++ KE ++
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYV---TRERDVMSR 91
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP V+ T ++D+ L L + G + + K GSF E+ R YT +++ LEYL
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H GI+HRD+K NIL++ I++ DFG +K + + A GT +++PE++ +
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPW 271
S+D+W++GC + ++ G PP+
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++++ E +G G + VY G+N +G +A+K+V + + + I
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREI-------SLMK 58
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK-FGSFPE----SVIRMYTKQLL 179
H NIVR ++ L ++ EF+ + + G+ P ++++ + QLL
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
GL + H+N I+HRD+K N+L++ +G +KL DFG ++ +N S T ++ A
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG--IPVNTFSSEVVTLWYRA 176
Query: 240 PEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTKS------- 289
P+V++ + +S S DIWS GC + EM TGKP P + +++ +F I T +
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 290 ----------------------HPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
P E L DFL LQ P +R +A + L HP+
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 328 VTGKYQ 333
Y
Sbjct: 297 FAEYYH 302
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG VY+ + ++A+K ++ + KE + +R HPNI
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEIQSHL---RHPNI 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
+R + + ++LEF P G + L K G F E + ++L L Y H+ ++
Sbjct: 77 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVI 136
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRDIK N+L+ KG +K+ADFG S L + M GT ++ PE+I H
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGKTHDEK 192
Query: 252 ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQK 311
D+W G E G PP+ + PP LS +KD + K L+
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSDGSKDLISKLLRY 249
Query: 312 EPYLRSTASELLQHPFVTG 330
P R +++HP+V
Sbjct: 250 HPPQRLPLKGVMEHPWVKA 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G V ++ SG+++AVK++ NS Q R P
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS------QEQKRLLMDLDISMRTVDCPFT 68
Query: 132 VRYLGTAREDDSLNILLEFVPGG---SISSLLGKFGSFPESVIRMYTKQLLLGLEYLH-K 187
V + G + + I +E + ++ K + PE ++ ++ LE+LH K
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVI--- 243
++HRD+K +N+L++ G +K+ DFG S +V+ + AK + G +MAPE I
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----DVAKDIDAGCKPYMAPERINPE 184
Query: 244 -LQTGHSFSADIWSVGCTVIEMATGKPP---WSQQFQEVAALFHIGTTKSHPPIP-EHLS 298
Q G+S +DIWS+G T+IE+A + P W FQ++ + + P +P + S
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEPSPQLPADKFS 240
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
E DF +CL+K R T EL+QHPF T
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 28/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V++A + + T+ +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV---------LQN 204
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + + D L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 186 H-KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEV 242
H + +++RD+K N+++D G IK+ DFG K+ ++ +GA K+ GTP ++APEV
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK----DGATMKTFCGTPEYLAPEV 320
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D W +G + EM G+ P+ Q E LF + P L EAK
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAK 377
Query: 303 DFLLKCLQKEPYLR-----STASELLQHPFVTG 330
L L+K+P R A E++QH F G
Sbjct: 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G+FG V + + + AVK +I SA + T +R HPN
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK--VINKASAKNKDTSTILREVELLKKL----DHPN 82
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I++ + S I+ E GG + + K F E KQ+ G+ Y+HK+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 191 MHRDIKGANILVDN--KGC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV L+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEV-LRGT 198
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKDFL 305
+ D+WS G + + +G PP+ + E L + T K +P+ +S +AKD +
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 306 LKCLQKEPYLRSTASELLQHPFV 328
K L P LR TA++ L+HP++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G+FG V + + + AVK +I SA + T +R HPN
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK--VINKASAKNKDTSTILREVELLKKL----DHPN 82
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I++ + S I+ E GG + + K F E KQ+ G+ Y+HK+ I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 191 MHRDIKGANILVDN--KGC-IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD+K NIL+++ K C IK+ DFG S + + K GT Y++APEV L+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEV-LRGT 198
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKDFL 305
+ D+WS G + + +G PP+ + E L + T K +P+ +S +AKD +
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 306 LKCLQKEPYLRSTASELLQHPFV 328
K L P LR TA++ L+HP++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 28/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V++A + + T+ +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV---------LQN 207
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + + D L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 186 H-KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEV 242
H + +++RD+K N+++D G IK+ DFG K+ ++ +GA K+ GTP ++APEV
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK----DGATMKTFCGTPEYLAPEV 323
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D W +G + EM G+ P+ Q E LF + P L EAK
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAK 380
Query: 303 DFLLKCLQKEPYLR-----STASELLQHPFVTG 330
L L+K+P R A E++QH F G
Sbjct: 381 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 413
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 65 RWRKGE----------LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIR 114
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 115 XXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY 174
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANIL---VDNKGCIKLADFGASKKVVELATINGAKSM 231
Q+L ++YLH GI+HRD+K N+L +D I ++DFG SK + ++ A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGT 286
GTP ++APEV+ Q +S + D WS+G + G PP+ + F+++
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK----AE 234
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
+ P + +S AKDF+ ++K+P R T + LQHP++ G
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 65 RWRKGE----------LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIR 114
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 115 XXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY 174
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANIL---VDNKGCIKLADFGASKKVVELATINGAKSM 231
Q+L ++YLH GI+HRD+K N+L +D I ++DFG SK + ++ A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFH---IGTTK 288
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 289 SHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
P + +S AKDF+ ++K+P R T + LQHP++ G
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 65 RWRKGE----------LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIR 114
RW++ E ++G GAF V + + + +L+A+K + +KE +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-------AKEALEGKEG 61
Query: 115 XXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY 174
HPNIV L ++++ V GG + + + G + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANIL---VDNKGCIKLADFGASKKVVELATINGAKSM 231
Q+L ++YLH GI+HRD+K N+L +D I ++DFG SK + ++ A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ-----FQEVAALFHIGT 286
GTP ++APEV+ Q +S + D WS+G + G PP+ + F+++
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK----AE 234
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
+ P + +S AKDF+ ++K+P R T + LQHP++ G
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 16/266 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G GAFG V + + S ++ A+K L++ K A P
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMK--LLSKFEMIKRSDSAFF---WEERDIMAFANSP 135
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+V+ ++D L +++E++PGG + +L+ + PE + YT +++L L+ +H G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG-- 247
++HRD+K N+L+D G +KLADFG K+ E ++ ++ GTP +++PEV+ G
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGD 253
Query: 248 --HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKD 303
+ D WSVG + EM G P+ V I K+ PE +S AK+
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYAD-SLVGTYSKIMDHKNSLCFPEDAEISKHAKN 312
Query: 304 FLLKCL-QKEPYL-RSTASELLQHPF 327
+ L +E L R+ E+ QHPF
Sbjct: 313 LICAFLTDREVRLGRNGVEEIKQHPF 338
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V++A + + T+ +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV---------LQN 66
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + + D L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 186 H-KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEV 242
H + +++RD+K N+++D G IK+ DFG K+ ++ +GA K GTP ++APEV
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK----DGATMKXFCGTPEYLAPEV 182
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D W +G + EM G+ P+ Q E LF + P L EAK
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAK 239
Query: 303 DFLLKCLQKEPYLR-----STASELLQHPFVTG 330
L L+K+P R A E++QH F G
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V++A + + T+ +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV---------LQN 64
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + + D L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 186 H-KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEV 242
H + +++RD+K N+++D G IK+ DFG K+ ++ +GA K GTP ++APEV
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK----DGATMKXFCGTPEYLAPEV 180
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D W +G + EM G+ P+ Q E LF + P L EAK
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAK 237
Query: 303 DFLLKCLQKEPYLR-----STASELLQHPFVTG 330
L L+K+P R A E++QH F G
Sbjct: 238 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 28/272 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V + +G+L AVK + + +S E A +R
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI---------- 77
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
H NIV + L ++++ V GG + + + G + E +Q+L + YLH
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 187 KNGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
+ GI+HRD+K N+L D + I ++DFG SK + ++ A GTP ++APEV+
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAPEVL 194
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLS 298
Q +S + D WS+G + G PP+ S+ F+++ + P + +S
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK----AEYEFDSPYWDDIS 250
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
AKDF+ ++K+P R T + +HP++ G
Sbjct: 251 DSAKDFIRNLMEKDPNKRYTCEQAARHPWIAG 282
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+L+G G FG+V + +G A+K +V++A + + T+ +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV---------LQN 65
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HP + + + D L ++E+ GG + L + F E R Y +++ L+YL
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 186 H-KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEV 242
H + +++RD+K N+++D G IK+ DFG K+ ++ +GA K GTP ++APEV
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK----DGATMKXFCGTPEYLAPEV 181
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + + D W +G + EM G+ P+ Q E LF + P L EAK
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL-ILMEEIRFPRTLGPEAK 238
Query: 303 DFLLKCLQKEPYLR-----STASELLQHPFVTG 330
L L+K+P R A E++QH F G
Sbjct: 239 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 65 RWRKGE----------LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIR 114
RW++ E ++G GAF V + + + +L+A+K + A + + I
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI- 67
Query: 115 XXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY 174
HPNIV L ++++ V GG + + + G + E
Sbjct: 68 ------AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANIL---VDNKGCIKLADFGASKKVVELATINGAKSM 231
Q+L ++YLH GI+HRD+K N+L +D I ++DFG SK + ++ A
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--- 178
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFH---IGTTK 288
GTP ++APEV+ Q +S + D WS+G + G PP+ + A LF +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQILKAEYE 236
Query: 289 SHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
P + +S AKDF+ ++K+P R T + LQHP++ G
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G+FG V+ G +AVK ++ E+ +R HP
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRL----RHP 94
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS---FPESVIRMYTKQLLLGLEYLH 186
NIV ++G + +L+I+ E++ GS+ LL K G+ E + G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 187 KNG--IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I+HR++K N+LVD K +K+ DFG S+ ++ +T +KS GTP WMAPEV+
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWS--QQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D++S G + E+AT + PW Q VAA +G IP +L+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---VGFKCKRLEIPRNLNPQVA 269
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ C EP+ R + + ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIM 290
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++G G+FG+V + ++G+L AVK V++ + T+ I
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI--------LSLAR 81
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HP + + + D L ++EFV GG + + K F E+ R Y +++ L +LH
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAK--SMKGTPYWMAPEVIL 244
GI++RD+K N+L+D++G KLADFG K+ NG + GTP ++APE++
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE----GICNGVTTATFCGTPDYIAPEILQ 197
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDF 304
+ + + D W++G + EM G P+ + ++ LF P L +A
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFE-AILNDEVVYPTWLHEDATGI 254
Query: 305 LLKCLQKEPYLR------STASELLQHPF 327
L + K P +R +L+HPF
Sbjct: 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPF 283
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 138/300 (46%), Gaps = 53/300 (17%)
Query: 72 VGCGAFGRVYMGMNL-DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G GA+G+V+ +L + G +A+K+V + +E HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 131 IVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGS--FPESVIRMYTKQLLLGL 182
+VR T RE L ++ E V +++ L K P I+ QLL GL
Sbjct: 76 VVRLFDVCTVSRTDRET-KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA-KSMKGTPYWMAPE 241
++LH + ++HRD+K NILV + G IKLADFG ++ + + A S+ T ++ APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSFQMALTSVVVTLWYRAPE 189
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAAL 281
V+LQ+ ++ D+WSVGC EM KP P + + AL
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 282 ----FHIGTTKSHPPIPEHLS---MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
FH +KS PI + ++ KD LLKCL P R +A L HP+ +QD
Sbjct: 250 PRQAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY----FQD 302
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 27/272 (9%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GE+ G G G+V+ +G ++AVKQ+ S +KE+ + R
Sbjct: 31 GEM-GSGTCGQVWKMRFRKTGHVIAVKQM---RRSGNKEENK---RILMDLDVVLKSHDC 83
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF--GSFPESVIRMYTKQLLLGLEYL- 185
P IV+ GT + + I +E + G+ + L K G PE ++ T ++ L YL
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVI- 243
K+G++HRD+K +NIL+D +G IKL DFG S ++V+ + AK G +MAPE I
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD----DKAKDRSAGCAAYMAPERID 197
Query: 244 ----LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPP-IPEHL- 297
+ + AD+WS+G +++E+ATG+ P+ + L + + PP +P H+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEPPLLPGHMG 255
Query: 298 -SMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S + + F+ CL K+ R ++LL+H F+
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL A K + +R
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QGKAFKNRELQIMRKL------- 70
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 71 ---DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 95
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 96 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 154
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 203
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 47/257 (18%)
Query: 34 GSSIRKSRIGLFSKPAVPALPPIEKTDAP-PIRWRKGELVGCGAFGRVYMGMNLDSGELL 92
GS + + + G SK P + D P + + +++G G+FG VY DSGEL+
Sbjct: 3 GSKVSRDKDG--SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV 60
Query: 93 AVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVR--YL----GTAREDDSLNI 146
A+K+VL ++E H NIVR Y G +++ LN+
Sbjct: 61 AIKKVLQDKRFKNRE------------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 108
Query: 147 LLEFVPGGSISSLLGKFG----SFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILV 202
+L++VP ++ + + + P +++Y QL L Y+H GI HRDIK N+L+
Sbjct: 109 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
Query: 203 D-NKGCIKLADFGASKKVVELATINGAKSMKGTP--------YWMAPEVIL-QTGHSFSA 252
D + +KL DFG++K++V +G P Y+ APE+I T ++ S
Sbjct: 168 DPDTAVLKLCDFGSAKQLV-----------RGEPNVSXICSRYYRAPELIFGATDYTSSI 216
Query: 253 DIWSVGCTVIEMATGKP 269
D+WS GC + E+ G+P
Sbjct: 217 DVWSAGCVLAELLLGQP 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 141/300 (47%), Gaps = 53/300 (17%)
Query: 72 VGCGAFGRVYMGMNL-DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G GA+G+V+ +L + G +A+K+V + + + + IR HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFE-HPN 75
Query: 131 IVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGS--FPESVIRMYTKQLLLGL 182
+VR T RE L ++ E V +++ L K P I+ QLL GL
Sbjct: 76 VVRLFDVCTVSRTDRET-KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA-KSMKGTPYWMAPE 241
++LH + ++HRD+K NILV + G IKLADFG ++ + + A S+ T ++ APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSFQMALTSVVVTLWYRAPE 189
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAAL 281
V+LQ+ ++ D+WSVGC EM KP P + + AL
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 282 ----FHIGTTKSHPPIPEHLS---MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
FH +KS PI + ++ KD LLKCL P R +A L HP+ +QD
Sbjct: 250 PRQAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY----FQD 302
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 101
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 160
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 209
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 210 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 138/293 (47%), Gaps = 49/293 (16%)
Query: 72 VGCGAFGRVYMGMNL-DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G GA+G+V+ +L + G +A+K+V + + + + IR HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFE-HPN 75
Query: 131 IVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGS--FPESVIRMYTKQLLLGL 182
+VR T RE L ++ E V +++ L K P I+ QLL GL
Sbjct: 76 VVRLFDVCTVSRTDRET-KLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA-KSMKGTPYWMAPE 241
++LH + ++HRD+K NILV + G IKLADFG ++ + + A S+ T ++ APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSFQMALTSVVVTLWYRAPE 189
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAAL 281
V+LQ+ ++ D+WSVGC EM KP P + + AL
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 282 ----FHIGTTKSHPPIPEHLS---MEAKDFLLKCLQKEPYLRSTASELLQHPF 327
FH +KS PI + ++ KD LLKCL P R +A L HP+
Sbjct: 250 PRQAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 101
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 160
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 209
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP +V + + L ++E+V GG + + + PE R Y+ ++ L L YLH+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
GI++RD+K N+L+D++G IKL D+G K+ L + + GTP ++APE++
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 248 HSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVAALFHIGTTKSHPPIPEHLSM 299
+ FS D W++G + EM G+ P+ Q E LF + K IP LS+
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSLSV 287
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRN 341
+A L L K+P R L HP HP FRN
Sbjct: 288 KAASVLKSFLNKDPKER-----LGCHPQTGFADIQGHPFFRN 324
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 103
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 104 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 162
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 211
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 72
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 73 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 131
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 180
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 80
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 81 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 139
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 188
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 105
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 106 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 164
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 213
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 75
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 76 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 134
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 183
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 184 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 86
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 87 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 145
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 194
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL A K + +R
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QGKAFKNRELQIMRKL------- 70
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 71 ---DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 9/155 (5%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL-HK 187
P IV + G D ++I +E + GGS+ +L + PE ++ + +L GL YL K
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+ IMHRD+K +NILV+++G IKL DFG S ++++ + A S GT +MAPE + T
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMAPERLQGTH 189
Query: 248 HSFSADIWSVGCTVIEMATGK----PPWSQQFQEV 278
+S +DIWS+G +++E+A G+ PP +++ + +
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 146
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 147 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 205
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 254
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+HPNI++ ++++LE V GG + + + G + E KQ+L + YLH
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 187 KNGIMHRDIKGANILVDN---KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
+NGI+HRD+K N+L +K+ADFG S K+VE + K++ GTP + APE++
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS-KIVEHQVL--MKTVCGTPGYCAPEIL 222
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--PPIPEHLSMEA 301
+ D+WSVG + G P+ + + I + + P + +S+ A
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
KD + K + +P R T + LQHP+VTGK
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGK 312
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 79
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 138
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 187
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL A K + +R
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QGKAFKNRELQIMRKL------- 70
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 71 ---DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 133/296 (44%), Gaps = 37/296 (12%)
Query: 45 FSKPAVPA---LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV---- 97
+PAV LP + +D R+ + +G G FG + + S EL+AVK +
Sbjct: 1 MDRPAVSGPMDLPIMHDSD----RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 98 LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSIS 157
IAAN + +R HPNIVR+ L I++E+ GG +
Sbjct: 57 KIAANVKREIINHRSLR-------------HPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 158 SLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC--IKLADFGA 215
+ G F E R + +QL+ G+ Y H + HRD+K N L+D +K+ DFG
Sbjct: 104 ERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 163
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS-ADIWSVGCTVIEMATGKPPWS-- 272
SK V + KS GTP ++APEV+L+ + AD+WS G T+ M G P+
Sbjct: 164 SKSSV---LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
Query: 273 ---QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ F++ + I + P H+S E + + + +P R + E+ H
Sbjct: 221 EEPKNFRK--TIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 68
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 69 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 127
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 176
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 177 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ +G GA+G VY + SG +A+K V +
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 125 XXTHPNIVRYL---GTAREDDSLNILLEFVP-GGSISSLLGKFG--SFPESVIRMYTKQL 178
HPN+VR + T+R D + + L F + + L K P I+ +Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP--- 235
L GL++LH N I+HRD+K NILV + G +KLADFG LA I + M TP
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG-------LARIYSYQ-MALTPVVV 181
Query: 236 --YWMAPEVILQTGHSFSADIWSVGCTVIEMATGKP 269
++ APEV+LQ+ ++ D+WSVGC EM KP
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 19/272 (6%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+++ + +G GA+G V + + +G A+K +I +S + T ++
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIK--IIKKSSVT---TTSNSGALLDEVAVLK 76
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISS---LLGKFGSFPESVIRMYTKQLLLG 181
HPNI++ + + +++E GG + L KF +VI KQ+L G
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSG 133
Query: 182 LEYLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWM 238
YLHK+ I+HRD+K N+L+++K IK+ DFG S K GT Y++
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYI 190
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHL 297
APEV L+ + D+WS G + + G PP+ Q QE+ G PP +
Sbjct: 191 APEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
S EAK + L EP R +A E L HP++
Sbjct: 250 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G+FG V+ G +AVK ++ E+ +R HP
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRL----RHP 94
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS---FPESVIRMYTKQLLLGLEYLH 186
NIV ++G + +L+I+ E++ GS+ LL K G+ E + G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 187 KNG--IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I+HRD+K N+LVD K +K+ DFG S+ ++ + +K GTP WMAPEV+
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWS--QQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D++S G + E+AT + PW Q VAA +G IP +L+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---VGFKCKRLEIPRNLNPQVA 269
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ C EP+ R + + ++
Sbjct: 270 AIIEGCWTNEPWKRPSFATIM 290
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 71
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G +++ LN++L++VP ++ + + + P +++
Sbjct: 72 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 130
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 179
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 180 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 19/272 (6%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+++ + +G GA+G V + + +G A+K +I +S + T ++
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIK--IIKKSSVT---TTSNSGALLDEVAVLK 59
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISS---LLGKFGSFPESVIRMYTKQLLLG 181
HPNI++ + + +++E GG + L KF +VI KQ+L G
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSG 116
Query: 182 LEYLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWM 238
YLHK+ I+HRD+K N+L+++K IK+ DFG S K GT Y++
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYI 173
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHL 297
APEV L+ + D+WS G + + G PP+ Q QE+ G PP +
Sbjct: 174 APEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
S EAK + L EP R +A E L HP++
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI++ + + +++E GG + + F E + KQ+L G+ YLHK
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMK---GTPYWMAPE 241
+ I+HRD+K N+L+++K IK+ DFG S A K MK GT Y++APE
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLS------AVFENQKKMKERLGTAYYIAPE 208
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
V L+ + D+WS+G + + G PP+ Q QE+ G P +++S
Sbjct: 209 V-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG 267
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
AKD + + LQ + R +A + L+HP++
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (44%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF------GSFPESVIRMYTKQLL 179
HPNIV+ L ++ L ++ EF +S L KF P +I+ Y QLL
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRA 172
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 231
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 287
Query: 332 YQD 334
+QD
Sbjct: 288 FQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (44%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF------GSFPESVIRMYTKQLL 179
HPNIV+ L ++ L ++ EF +S L KF P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ A
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRA 174
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 233
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 289
Query: 332 YQD 334
+QD
Sbjct: 290 FQD 292
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 108/223 (48%), Gaps = 17/223 (7%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HP +V + + L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
+ GI++RD+K N+L+D++G IKL D+G K+ L + GTP ++APE++
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVAALFHIGTTKSHPPIPEHLS 298
+ FS D W++G + EM G+ P+ Q E LF + K IP LS
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSLS 239
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRN 341
++A L L K+P R L HP HP FRN
Sbjct: 240 VKAASVLKSFLNKDPKER-----LGCHPQTGFADIQGHPFFRN 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 29/292 (9%)
Query: 45 FSKPAVPA---LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA 101
+PAV LP + +D R+ + +G G FG + + + EL+AVK +
Sbjct: 1 MDRPAVAGPMDLPIMHDSD----RYELVKDIGAGNFGVARLMRDKQANELVAVKYI---- 52
Query: 102 NSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG 161
EK +++ HPNIVR+ L I++E+ GG + +
Sbjct: 53 --ERGEKIDENVKREIINHRSL---RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 107
Query: 162 KFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC--IKLADFGASKKV 219
G F E R + +QL+ G+ Y H + HRD+K N L+D +K+ADFG SK
Sbjct: 108 NAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKAS 167
Query: 220 VELATINGAKSMKGTPYWMAPEVILQTGHSFS-ADIWSVGCTVIEMATGKPPWS-----Q 273
V + KS GTP ++APEV+L+ + AD+WS G T+ M G P+ +
Sbjct: 168 V---LHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
F++ + I + P H+S E + + + +P R + E+ H
Sbjct: 225 NFRK--TIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 34/302 (11%)
Query: 52 ALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKE---- 107
A+ P+ D +R ++G G++ +V + + + A+K V + ++
Sbjct: 2 AMDPLGLQDFDLLR-----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV 56
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP 167
+T+ H+ HP +V + + L ++E+V GG + + + P
Sbjct: 57 QTEKHV--------FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP 108
Query: 168 ESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING 227
E R Y+ ++ L L YLH+ GI++RD+K N+L+D++G IKL D+G K+ L +
Sbjct: 109 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDT 166
Query: 228 AKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVA 279
GTP ++APE++ + FS D W++G + EM G+ P+ Q E
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-D 225
Query: 280 ALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVF 339
LF + K IP LS++A L L K+P R L HP HP F
Sbjct: 226 YLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER-----LGCHPQTGFADIQGHPFF 279
Query: 340 RN 341
RN
Sbjct: 280 RN 281
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AVK + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G+P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AVK + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G+P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 44/226 (19%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+ + +++G G+FG VY DSGEL+A+K+VL ++E
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIM 67
Query: 124 XXXTHPNIVR--YL----GTAREDDSLNILLEFVPGGSISSLLGKFG----SFPESVIRM 173
H NIVR Y G ++ LN++L++VP ++ + + + P +++
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 126
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMK 232
Y QL L Y+H GI HRDIK N+L+D + +KL DFG++K++V +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-----------R 175
Query: 233 GTP--------YWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
G P Y+ APE+I T ++ S D+WS GC + E+ G+P
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 171
Query: 240 PEVIL-QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 230
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 286
Query: 332 YQD 334
+QD
Sbjct: 287 FQD 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 66
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 67 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 121
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 178
Query: 240 PEVIL-QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 237
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 293
Query: 332 YQD 334
+QD
Sbjct: 294 FQD 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 289
Query: 333 QD 334
QD
Sbjct: 290 QD 291
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 132 VRYL---GTAREDDSLNILLEFVP-GGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYL 185
VR + T+R D + + L F + + L K P I+ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H N I+HRD+K NILV + G +KLADFG ++ ++ + T ++ APEV+LQ
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD---PVVVTLWYRAPEVLLQ 185
Query: 246 TGHSFSADIWSVGCTVIEMATGKP 269
+ ++ D+WSVGC EM KP
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AVK + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 171
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 230
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 286
Query: 332 YQD 334
+QD
Sbjct: 287 FQD 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 290
Query: 333 QD 334
QD
Sbjct: 291 QD 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 289
Query: 333 QD 334
QD
Sbjct: 290 QD 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 289
Query: 333 QD 334
QD
Sbjct: 290 QD 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 66
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 67 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 121
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 178
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 237
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 293
Query: 332 YQD 334
+QD
Sbjct: 294 FQD 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 287
Query: 333 QD 334
QD
Sbjct: 288 QD 289
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 53 LPPIEKTDAPPIRWRKGE-LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQA 111
L P++ + W + VG G+FG V+ + +G AVK+V + + A
Sbjct: 46 LKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACA 105
Query: 112 HIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI 171
+ + P IV G RE +NI +E + GGS+ L+ + G PE
Sbjct: 106 GL-------------SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 152
Query: 172 RMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC-IKLADFGASKKVVELATINGAKS 230
Y Q L GLEYLH I+H D+K N+L+ + G L DFG + + L KS
Sbjct: 153 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA---LCLQPDGLGKS 209
Query: 231 M------KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI 284
+ GT MAPEV++ DIWS C ++ M G PW+Q F+ L
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA 269
Query: 285 GTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL-------------LQHPFVTGK 331
IP + + + L+KEP R++A EL L+ P+ G+
Sbjct: 270 SEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW-KGE 328
Query: 332 YQDP 335
Y++P
Sbjct: 329 YKEP 332
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 170
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 229
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 285
Query: 332 YQD 334
+QD
Sbjct: 286 FQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 171
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 230
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 286
Query: 332 YQD 334
+QD
Sbjct: 287 FQD 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 287
Query: 333 QD 334
QD
Sbjct: 288 QD 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 172
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 231
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 287
Query: 332 YQD 334
+QD
Sbjct: 288 FQD 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 63
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 64 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 118
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 175
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 234
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 290
Query: 332 YQD 334
+QD
Sbjct: 291 FQD 293
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 41/279 (14%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G V ++ SG+++AVK++ S EK Q + P I
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI----RSTVDEKEQKQL--LMDLDVVMRSSDCPYI 83
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSF---------PESVIRMYTKQLLLGL 182
V++ G + I +E +S+ KF + PE ++ T + L
Sbjct: 84 VQFYGALFREGDCWICMEL-----MSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 183 EYLHKN-GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
+L +N I+HRDIK +NIL+D G IKL DFG S ++V+ +I + PY MAPE
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPY-MAPE 195
Query: 242 VI----LQTGHSFSADIWSVGCTVIEMATGK---PPWSQQFQEVAALFHIGTTKSHPPI- 293
I + G+ +D+WS+G T+ E+ATG+ P W+ F ++ + K PP
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV-----VKGDPPQL 250
Query: 294 ----PEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
S +F+ CL K+ R ELL+HPF+
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AV+ + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G+P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 288
Query: 333 QD 334
QD
Sbjct: 289 QD 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 290
Query: 333 QD 334
QD
Sbjct: 291 QD 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 287
Query: 333 QD 334
QD
Sbjct: 288 QD 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 288
Query: 333 QD 334
QD
Sbjct: 289 QD 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 171
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 230
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 286
Query: 332 YQD 334
+QD
Sbjct: 287 FQD 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 287
Query: 333 QD 334
QD
Sbjct: 288 QD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 170
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 229
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 285
Query: 332 YQD 334
+QD
Sbjct: 286 FQD 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 171
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 286
Query: 333 QD 334
QD
Sbjct: 287 QD 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 290
Query: 333 QD 334
QD
Sbjct: 291 QD 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 171
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 286
Query: 333 QD 334
QD
Sbjct: 287 QD 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 172
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 287
Query: 333 QD 334
QD
Sbjct: 288 QD 289
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 53 LPPIEKTDAPPIRWRKGE-LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQA 111
L P++ + W + VG G+FG V+ + +G AVK+V + + A
Sbjct: 62 LKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACA 121
Query: 112 HIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI 171
+ + P IV G RE +NI +E + GGS+ L+ + G PE
Sbjct: 122 GL-------------SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 168
Query: 172 RMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC-IKLADFGASKKVVELATINGAKS 230
Y Q L GLEYLH I+H D+K N+L+ + G L DFG + + L KS
Sbjct: 169 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA---LCLQPDGLGKS 225
Query: 231 M------KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI 284
+ GT MAPEV++ DIWS C ++ M G PW+Q F+ L
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA 285
Query: 285 GTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL-------------LQHPFVTGK 331
IP + + + L+KEP R++A EL L+ P+ G+
Sbjct: 286 SEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW-KGE 344
Query: 332 YQDP 335
Y++P
Sbjct: 345 YKEP 348
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 290
Query: 333 QD 334
QD
Sbjct: 291 QD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 116
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 174
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 289
Query: 333 QD 334
QD
Sbjct: 290 QD 291
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 132 VRYL---GTAREDDSLNILLEFVP-GGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYL 185
VR + T+R D + + L F + + L K P I+ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMAPEVIL 244
H N I+HRD+K NILV + G +KLADFG ++ ++A ++ ++ APEV+L
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL----WYRAPEVLL 184
Query: 245 QTGHSFSADIWSVGCTVIEMATGKP 269
Q+ ++ D+WSVGC EM KP
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 115
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 173
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 288
Query: 333 QD 334
QD
Sbjct: 289 QD 290
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 25/268 (9%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG+VY + G+ +AVK AA E I HP
Sbjct: 13 EIIGIGGFGKVYRAFWI--GDEVAVK----AARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKN 188
NI+ G ++ +L +++EF GG ++ +L GK P ++ + Q+ G+ YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDE 124
Query: 189 GI---MHRDIKGANILVDNK--------GCIKLADFGASKKVVELATINGAKSMKGTPYW 237
I +HRD+K +NIL+ K +K+ DFG +++ ++ A G W
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GAYAW 180
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHL 297
MAPEVI + S +D+WS G + E+ TG+ P+ + +A + + K PIP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-RGIDGLAVAYGVAMNKLALPIPSTC 239
Query: 298 SMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ C +P+ R + + +L
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 63
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 64 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 118
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 176
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 291
Query: 333 QD 334
QD
Sbjct: 292 QD 293
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AV+ + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N G+P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFCGSPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP + +D R+ + +G G FG + + S EL+AVK + EK +
Sbjct: 11 LPIMHDSD----RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI------ERGEKIDEN 60
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIR 172
++ HPNIVR+ L I++E+ GG + + G F E R
Sbjct: 61 VKREIINHRSLR---HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR 117
Query: 173 MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC--IKLADFGASKKVVELATINGAKS 230
+ +QL+ G+ Y H + HRD+K N L+D +K+ DFG SK V + KS
Sbjct: 118 FFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV---LHSQPKS 174
Query: 231 MKGTPYWMAPEVILQTGHSFS-ADIWSVGCTVIEMATGKPPWS-----QQFQEVAALFHI 284
GTP ++APEV+L+ + AD+WS G T+ M G P+ + F++ + I
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRI 232
Query: 285 GTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ P H+S E + + + +P R + E+ H
Sbjct: 233 LNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 273
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G VY + SG +A+K V + +E HPN+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG---EEGLPISTVREVALLRRLEAFEHPNV 68
Query: 132 VRYL---GTAREDDSLNILLEFVP-GGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYL 185
VR + T+R D + + L F + + L K P I+ +Q L GL++L
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H N I+HRD+K NILV + G +KLADFG ++ + + T ++ APEV+LQ
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 246 TGHSFSADIWSVGCTVIEMATGKP 269
+ ++ D+WSVGC EM KP
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 17/223 (7%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HP +V + + L ++E+V GG + + + PE R Y+ ++ L L YLH
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
+ GI++RD+K N+L+D++G IKL D+G K+ L + GTP ++APE++
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVAALFHIGTTKSHPPIPEHLS 298
+ FS D W++G + EM G+ P+ Q E LF + K IP +S
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVILEK-QIRIPRSMS 254
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRN 341
++A L L K+P R + G HP FRN
Sbjct: 255 VKAASVLKSFLNKDPKERLGCLPQTGFADIQG-----HPFFRN 292
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AVK + NS+S +K +R
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL----- 63
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 64 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G+P + APE+
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELF- 177
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 178 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 232
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++++ ++ ++D
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G GAFG V + + + ++ A+K L++ K A P
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMK--LLSKFEMIKRSDSAFF---WEERDIMAFANSP 129
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+V+ ++D L +++E++PGG + +L+ + PE R YT +++L L+ +H G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 188
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG-- 247
+HRD+K N+L+D G +KLADFG K+ + + ++ GTP +++PEV+ G
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 248 --HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKD 303
+ D WSVG + EM G P+ V I K+ P+ +S EAK+
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 306
Query: 304 FLLKCL-QKEPYL-RSTASELLQHPF 327
+ L +E L R+ E+ +H F
Sbjct: 307 LICAFLTDREVRLGRNGVEEIKRHLF 332
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G GAFG V + + + ++ A+K L++ K A P
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMK--LLSKFEMIKRSDSAFF---WEERDIMAFANSP 134
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+V+ ++D L +++E++PGG + +L+ + PE R YT +++L L+ +H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG-- 247
+HRD+K N+L+D G +KLADFG K+ + + ++ GTP +++PEV+ G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 248 --HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKD 303
+ D WSVG + EM G P+ V I K+ P+ +S EAK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 304 FLLKCL-QKEPYL-RSTASELLQHPF 327
+ L +E L R+ E+ +H F
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLF 337
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 33/294 (11%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ K + +G G F VY + ++ +++A+K++ + S +K+ R
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGIN---RTALREIKLLQ 67
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
+HPNI+ L +++++ +F+ + S I+ Y L GLEY
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWM-APEVI 243
LH++ I+HRD+K N+L+D G +KLADFG +K + N A + W APE++
Sbjct: 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRAYXHQVVTRWYRAPELL 184
Query: 244 L-QTGHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAALF 282
+ D+W+VGC + E+ P P +Q+ ++ +L
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 283 HIGTTKSHPPIP-EHLSMEAKDFLLKCLQK----EPYLRSTASELLQHPFVTGK 331
T KS P IP H+ A D LL +Q P R TA++ L+ + + +
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 30/326 (9%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V M + +G+ A K + ++A K + +A I
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI---------CRLL 60
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + E+ ++ + V GG + + + E+ +Q+L + + H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 187 KNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVL 178
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + D+W+ G + + G PP W + + G P + ++ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQ----------IAT 352
D + K L P R TASE L+HP++ + + R ++ + I T
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 353 PGMNLRN--SMNSLVRRSTGLKDVCE 376
+ RN + SL+++ G+K+ E
Sbjct: 299 TMLATRNFSAAKSLLKKPDGVKESTE 324
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G GAFG V + + + ++ A+K L++ K A P
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMK--LLSKFEMIKRSDSAFF---WEERDIMAFANSP 134
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+V+ ++D L +++E++PGG + +L+ + PE R YT +++L L+ +H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG-- 247
+HRD+K N+L+D G +KLADFG K+ + + ++ GTP +++PEV+ G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 248 --HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAKD 303
+ D WSVG + EM G P+ V I K+ P+ +S EAK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKN 311
Query: 304 FLLKCL-QKEPYL-RSTASELLQHPF 327
+ L +E L R+ E+ +H F
Sbjct: 312 LICAFLTDREVRLGRNGVEEIKRHLF 337
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GE++G G FG+ + ++GE++ +K+++ E+TQ R H
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELI-----RFDEETQ---RTFLKEVKVMRCLEH 66
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHK 187
PN+++++G +D LN + E++ GG++ ++ S +P S + K + G+ YLH
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATI-NGAKSMK-----------GTP 235
I+HRD+ N LV + +ADFG ++ +V+ T G +S+K G P
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 236 YWMAPEVILQTGHSFSADIWSVG---CTVIEMATGKPPW 271
YWMAPE+I + D++S G C +I P +
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 133/302 (44%), Gaps = 34/302 (11%)
Query: 53 LPPIEKTDAPPIRWRKGE-LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQA 111
L P++ + W + +G G+FG V+ + +G AVK+V + + A
Sbjct: 60 LKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACA 119
Query: 112 HIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI 171
+ + P IV G RE +NI +E + GGS+ L+ + G PE
Sbjct: 120 GL-------------SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 166
Query: 172 RMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC-IKLADFGASKKV----VELATIN 226
Y Q L GLEYLH I+H D+K N+L+ + G L DFG + + + + +
Sbjct: 167 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 227 GAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGT 286
G + GT MAPEV++ DIWS C ++ M G PW+Q F+ L
Sbjct: 227 G-DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE 285
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL-------------LQHPFVTGKYQ 333
IP + + + L+KEP R++A EL L+ P+ G+Y+
Sbjct: 286 PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW-KGEYK 344
Query: 334 DP 335
+P
Sbjct: 345 EP 346
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GA+G V ++ SG++ AVK++ NS Q R P
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS------QEQKRLLXDLDISXRTVDCPFT 95
Query: 132 VRYLGTAREDDSLNILLEFVPGG---SISSLLGKFGSFPESVIRMYTKQLLLGLEYLH-K 187
V + G + + I E ++ K + PE ++ ++ LE+LH K
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVI--- 243
++HRD+K +N+L++ G +K DFG S +V+ + AK + G + APE I
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD----DVAKDIDAGCKPYXAPERINPE 211
Query: 244 -LQTGHSFSADIWSVGCTVIEMATGKPP---WSQQFQEVAALFHIGTTKSHPPIP-EHLS 298
Q G+S +DIWS+G T IE+A + P W FQ++ + + P +P + S
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV----VEEPSPQLPADKFS 267
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
E DF +CL+K R T EL QHPF T
Sbjct: 268 AEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 13/267 (4%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT-- 127
+++G G V ++ +G AVK + + A S E+ + +R
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE-EVREATRRETHILRQVAG 158
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HP+I+ + + + ++ + + G + L + + E R + LL + +LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI---- 243
N I+HRD+K NIL+D+ I+L+DFG S L + + GTP ++APE++
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFS---CHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 244 --LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
G+ D+W+ G + + G PP W ++ + + G + P + S
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST 335
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPF 327
KD + + LQ +P R TA + LQHPF
Sbjct: 336 VKDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 6/219 (2%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
L P A P + +++G G+FG+V + + AVK ++ + K+K + H
Sbjct: 27 LGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVK--VLQKKAILKKKEEKH 84
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIR 172
I HP +V + + D L +L+++ GG + L + F E R
Sbjct: 85 I--MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR 142
Query: 173 MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK 232
Y ++ L YLH I++RD+K NIL+D++G I L DFG K+ +E + +
Sbjct: 143 FYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS--TFC 200
Query: 233 GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPW 271
GTP ++APEV+ + + + D W +G + EM G PP+
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 139/303 (45%), Gaps = 57/303 (18%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
I + +++G G+FG V+ ++S E+ A+K+VL ++E I
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNRELQIMRI---------- 88
Query: 124 XXXTHPNIVRYL------GTAREDDSLNILLEFVPGGSI--SSLLGKFG-SFPESVIRMY 174
HPN+V G +++ LN++LE+VP S K + P +I++Y
Sbjct: 89 --VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKG 233
QLL L Y+H GI HRDIK N+L+D G +KL DFG++K + I G ++
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-----IAGEPNVSX 201
Query: 234 --TPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTK 288
+ Y+ APE+I T ++ + DIWS GC + E+ G+P P ++ + + T
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 289 SHPPI----PEHLSM--------------------EAKDFLLKCLQKEPYLRSTASELLQ 324
S I P ++ +A D + + L+ P R TA E L
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 325 HPF 327
HPF
Sbjct: 322 HPF 324
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++G V+ + + G L AVK+ + + K++ R HP
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSM-SPFRGPKDRA----RKLAEVGSHEKVGQHPCC 119
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFG-SFPESVIRMYTKQLLLGLEYLHKNGI 190
VR L A E+ + L + G S+ +G S PE+ + Y + LL L +LH G+
Sbjct: 120 VR-LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF 250
+H D+K ANI + +G KL DFG +VEL T + +G P +MAPE +LQ +
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYMAPE-LLQGSYGT 234
Query: 251 SADIWSVGCTVIEMAT------GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDF 304
+AD++S+G T++E+A G W Q Q P LS E +
Sbjct: 235 AADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP----------PEFTAGLSSELRSV 284
Query: 305 LLKCLQKEPYLRSTASELLQHPFV 328
L+ L+ +P LR+TA LL P +
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVL 308
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG + + + EL+AVK I +A E Q I HPNI
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVK--YIERGAAIDENVQREI-------INHRSLRHPNI 78
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
VR+ L I++E+ GG + + G F E R + +QLL G+ Y H I
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 192 HRDIKGANILVDNKGC--IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS 249
HRD+K N L+D +K+ DFG SK V + KS GTP ++APEV+L+ +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 250 FS-ADIWSVGCTVIEMATGKPPW 271
AD+WS G T+ M G P+
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPF 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 50/302 (16%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 62
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ E V S+L G P +I+ Y QLL
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 117
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
GL + H + ++HRD+K N+L++ +G IKLADFG ++ + T ++ AP
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAP 175
Query: 241 EVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-------- 291
E++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 292 -PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+P++ L + + L + L +P R +A L HPF +
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF----F 290
Query: 333 QD 334
QD
Sbjct: 291 QD 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+K++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ E V S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 170
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 229
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 285
Query: 332 YQD 334
+QD
Sbjct: 286 FQD 288
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 110/249 (44%), Gaps = 19/249 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI+ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMNLRNSMN 362
DF+ K L KE R T E L+HP++T V R SV +NL N
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESV-----------VNLENFKK 299
Query: 363 SLVRRSTGL 371
VRR L
Sbjct: 300 QYVRRRWKL 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 37/291 (12%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++K E VG G +G VY + G ++A+K++ + A T IR
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELH- 77
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV + + L ++ EF+ L +S I++Y QLL G+ +
Sbjct: 78 ---HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H++ I+HRD+K N+L+++ G +KLADFG ++ + T ++ AP+V++
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVLM 192
Query: 245 QT-GHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAAL-- 281
+ +S S DIWS+GC EM TGKP P +++ +V L
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 282 -----FHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
F + K I E D L L +P R +A + + HP+
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+ ++ + + T IR
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKEL--- 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 114
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 171
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 230
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 286
Query: 332 YQD 334
+QD
Sbjct: 287 FQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K E +G G +G VY N +GE++A+ ++ + + T IR
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKEL--- 58
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGG-----SISSLLGKFGSFPESVIRMYTKQLLL 180
HPNIV+ L ++ L ++ EF+ S+L G P +I+ Y QLL
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQ 113
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-VELATINGAKSMKGTPYWMA 239
GL + H + ++HRD+K N+L++ +G IKLADFG ++ V + T T ++ A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRA 170
Query: 240 PEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHP------- 291
PE++L +S + DIWS+GC EM T + + E+ LF I T P
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPG 229
Query: 292 --PIPEH------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+P++ L + + L + L +P R +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF---- 285
Query: 332 YQD 334
+QD
Sbjct: 286 FQD 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 142 DSLNILLEFVPGGSISSLLGKFGS--FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGAN 199
D+L ++L + GG + + G FPE+ Y ++ GLE LH+ I++RD+K N
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN 316
Query: 200 ILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGC 259
IL+D+ G I+++D G + V E TI G GT +MAPEV+ ++FS D W++GC
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 260 TVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-PIPEHLSMEAKDFLLKCLQKEPYLR-- 316
+ EM G+ P+ Q+ +++ K P E S +A+ + L K+P R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 317 ---STASELLQHPF 327
+A E+ +HP
Sbjct: 434 CRGGSAREVKEHPL 447
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 111/249 (44%), Gaps = 19/249 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + H S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMNLRNSMN 362
DF+ K L KE R T E L+HP++T V R SV +NL N
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV-----------VNLENFRK 299
Query: 363 SLVRRSTGL 371
VRR + L
Sbjct: 300 QYVRRRSKL 308
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 142 DSLNILLEFVPGGSISSLLGKFGS--FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGAN 199
D+L ++L + GG + + G FPE+ Y ++ GLE LH+ I++RD+K N
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN 316
Query: 200 ILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGC 259
IL+D+ G I+++D G + V E TI G GT +MAPEV+ ++FS D W++GC
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 260 TVIEMATGKPPWSQQFQEVAALFHIGTTKSHP-PIPEHLSMEAKDFLLKCLQKEPYLR-- 316
+ EM G+ P+ Q+ +++ K P E S +A+ + L K+P R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 317 ---STASELLQHPF 327
+A E+ +HP
Sbjct: 434 CRGGSAREVKEHPL 447
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 37/291 (12%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++K E VG G +G VY + G ++A+K++ + A T IR
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELH- 77
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV + + L ++ EF+ L +S I++Y QLL G+ +
Sbjct: 78 ---HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H++ I+HRD+K N+L+++ G +KLADFG ++ + T ++ AP+V++
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVLM 192
Query: 245 QT-GHSFSADIWSVGCTVIEMATGKP--------------------PWSQQFQEVAAL-- 281
+ +S S DIWS+GC EM TGKP P +++ +V L
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 282 -----FHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
F + K I E D L L +P R +A + + HP+
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------XINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G G VY+ + +A+K + I KE+T ++
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE--KEET---LKRFEREVHNSS 66
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
+H NIV + EDD +++E++ G ++S + G +T Q+L G+++
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H I+HRDIK NIL+D+ +K+ DFG +K + E ++ + GT + +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-TSLTQTNHVLGTVQYFSPEQAK 185
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIG------TTKSHPPIPEHLS 298
DI+S+G + EM G+PP++ + A+ HI TT IP+ LS
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245
Query: 299 MEAKDFLLKCLQKE 312
+ +L+ +K+
Sbjct: 246 ----NVILRATEKD 255
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 21/252 (8%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++G G+FG+V + + EL A+K V+I + + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV--------LALLD 77
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
P + + + D L ++E+V GG + + + G F E Y ++ +GL +LH
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA--KSMKGTPYWMAPEVIL 244
K GI++RD+K N+++D++G IK+ADFG K+ ++G + GTP ++APE+I
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----HMMDGVTTREFCGTPDYIAPEIIA 193
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDF 304
+ S D W+ G + EM G+PP+ + ++ LF + + P+ LS EA
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQ-SIMEHNVSYPKSLSKEAVSI 250
Query: 305 LLKCLQKEPYLR 316
+ K P R
Sbjct: 251 CKGLMTKHPAKR 262
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------XINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V M + +G+ A K + ++A K + +A I
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI---------CRLL 60
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + E+ ++ + V GG + + + E+ +Q+L + + H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 187 KNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVL 178
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + D+W+ G + + G PP W + + G P + ++ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
D + K L P R TASE L+HP++ +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQR 267
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 29/292 (9%)
Query: 45 FSKPAVPA---LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA 101
+PAV LP + +D R+ + +G G FG + + S EL+AVK +
Sbjct: 1 MDRPAVSGPMDLPIMHDSD----RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---- 52
Query: 102 NSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG 161
EK +++ HPNIVR+ L I++E+ GG + +
Sbjct: 53 --ERGEKIDENVKREIINHRSL---RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 107
Query: 162 KFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC--IKLADFGASKKV 219
G F E R + +QL+ G+ Y H + HRD+K N L+D +K+ FG SK
Sbjct: 108 NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSS 167
Query: 220 VELATINGAKSMKGTPYWMAPEVILQTGHSFS-ADIWSVGCTVIEMATGKPPWS-----Q 273
V + KS GTP ++APEV+L+ + AD+WS G T+ M G P+ +
Sbjct: 168 V---LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
F++ + I + P H+S E + + + +P R + E+ H
Sbjct: 225 NFRK--TIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------XINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 59
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++EF+P GS+ L K + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
LVG G++G V N D+G ++A+K+ L + + +K H N
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR------EIKLLKQLRHEN 85
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE----SVIRMYTKQLLLGLEYLH 186
+V L ++ ++ EFV ++L FP V++ Y Q++ G+ + H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL-Q 245
+ I+HRDIK NILV G +KL DFG ++ + + + T ++ APE+++
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVGD 199
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH--------------- 290
+ + D+W++GC V EM G+P + ++ L+HI +
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGD-SDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 291 -----PPIPEHLSMEAK---------DFLLKCLQKEPYLRSTASELLQHPF 327
P I E +E + D KCL +P R +ELL H F
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 41/287 (14%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++G V+ N D+G+++A+K+ L + + +K HPN+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI------ALREIRMLKQLKHPNL 64
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
V L R L+++ E+ + L PE +++ T Q L + + HK+ +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL-QTGHSF 250
HRD+K NIL+ IKL DFG ++ + + T ++ +PE+++ T +
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLT--GPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 251 SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH-------------- 296
D+W++GC E+ +G P W + +V L+ I T IP H
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGK-SDVDQLYLIRKTLG-DLIPRHQQVFSTNQYFSGVK 240
Query: 297 ----------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+S A L CL +P R T +LL HP+
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 110/249 (44%), Gaps = 19/249 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + H S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMNLRNSMN 362
DF+ K L KE R T E L+HP++T V R SV +NL N
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV-----------VNLENFRK 299
Query: 363 SLVRRSTGL 371
VRR L
Sbjct: 300 QYVRRRWKL 308
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA+G V + +N + E +AVK V + E + I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINAM 61
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 131/275 (47%), Gaps = 23/275 (8%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G +A+K + N S +K +R
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL----- 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 69 --NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 126
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA-KSMKGTPYWMAPEVI 243
H+ I+HRD+K N+L+D IK+ADFG S + T+ G + G+P + APE+
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDTFCGSPPYAAPELF 182
Query: 244 LQTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSM 299
G + D+WS+G + + +G P+ Q +E+ G + IP ++S
Sbjct: 183 --QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMST 236
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+ ++ L + L P R T ++++ ++ +++
Sbjct: 237 DCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 271
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 19/283 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V ++ +G A K + ++A K + +A I
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI---------CRKL 85
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + +E+ ++ + V GG + + + E+ +Q+L + Y H
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 187 KNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HR++K N+L+ +K +KLADFG + +V + +G GTP +++PEV+
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVL 202
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +S DIW+ G + + G PP W + + A G P + ++ EAK
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVME 345
+ L P R TA + L+ P++ + + + R ++
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVD 305
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 29/292 (9%)
Query: 45 FSKPAVPA---LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAA 101
+PAV LP + +D R+ + +G G FG + + S EL+AVK +
Sbjct: 1 MDRPAVSGPMDLPIMHDSD----RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---- 52
Query: 102 NSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG 161
EK +++ HPNIVR+ L I++E+ GG + +
Sbjct: 53 --ERGEKIDENVKREIINHRSL---RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 107
Query: 162 KFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGC--IKLADFGASKKV 219
G F E R + +QL+ G+ Y H + HRD+K N L+D +K+ FG SK
Sbjct: 108 NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSS 167
Query: 220 VELATINGAKSMKGTPYWMAPEVILQTGHSFS-ADIWSVGCTVIEMATGKPPWS-----Q 273
V + K GTP ++APEV+L+ + AD+WS G T+ M G P+ +
Sbjct: 168 V---LHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
F++ + I + P H+S E + + + +P R + E+ H
Sbjct: 225 NFRK--TIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 139 REDDSLNILLEFVPGGSISSLLGKFGS-FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKG 197
++++ L +++E+ GG + +LL KFG P + R Y ++++ ++ +H+ G +HRDIK
Sbjct: 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKP 190
Query: 198 ANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF------- 250
NIL+D G I+LADFG+ K+ T+ ++ GTP +++PE++ G
Sbjct: 191 DNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 251 SADIWSVGCTVIEMATGKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL--L 306
D W++G EM G+ P+ + + H S P + E + EA+DF+ L
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRL 309
Query: 307 KCLQKEPYLRSTASELLQHPFVTG 330
C + R A + HPF G
Sbjct: 310 LCPPETRLGRGGAGDFRTHPFFFG 333
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 73
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 68
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 74
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 21/274 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G+ +AVK + NS+S +K +R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL----- 70
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L ++ E+ GG + L G E R +Q++ ++Y
Sbjct: 71 --NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G P + APE+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELF- 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP + S +
Sbjct: 185 -QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYXSTD 239
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
++ L K L P R T ++ + + ++D
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXKDRWXNVGHED 273
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 76
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 100
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 22/287 (7%)
Query: 52 ALPPI--EKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKT 109
++PP+ E D + +G G+FG+V + D+ ++ A+K + + K
Sbjct: 1 SMPPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYM-----NKQKCVE 55
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES 169
+ +R HP +V + ++++ + ++++ + GG + L + F E
Sbjct: 56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 170 VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAK 229
++++ +L++ L+YL I+HRD+K NIL+D G + + DF + + I
Sbjct: 116 TVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT--- 172
Query: 230 SMKGTPYWMAPEVILQ---TGHSFSADIWSVGCTVIEMATGKPPW----SQQFQEVAALF 282
+M GT +MAPE+ G+SF+ D WS+G T E+ G+ P+ S +E+ F
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
Query: 283 HIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLR-STASELLQHPFV 328
P S E L K L+ P R S S++ P++
Sbjct: 233 ETTVVT----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 19/249 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMNLRNSMN 362
DF+ K L KE R T E L+HP++T V R SV +NL N
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV-----------VNLENFRK 299
Query: 363 SLVRRSTGL 371
VRR + L
Sbjct: 300 QYVRRRSKL 308
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 67
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 69
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 75
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPN+V+ + + +D L ++ E V G + + E R Y + L+ G+EYL
Sbjct: 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQARFYFQDLIKGIEYL 153
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSM----KGTPYWMAPE 241
H I+HRDIK +N+LV G IK+ADFG S + G+ ++ GTP +MAPE
Sbjct: 154 HYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE------FKGSDALLSNTVGTPAFMAPE 207
Query: 242 VILQTGHSFSA---DIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH-- 296
+ +T FS D+W++G T+ G+ P+ E H P+
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF---MDERIMCLHSKIKSQALEFPDQPD 264
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
++ + KD + + L K P R E+ HP+VT
Sbjct: 265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G +A+K + N S +K +R
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL----- 71
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 72 --NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGA-KSMKGTPYWMAPEVI 243
H+ I+HRD+K N+L+D IK+ADFG S + T+ G + G P + APE+
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDAFCGAPPYAAPELF 185
Query: 244 LQTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSM 299
G + D+WS+G + + +G P+ Q +E+ G + IP ++S
Sbjct: 186 --QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMST 239
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+ ++ L + L P R T ++++ ++ +++
Sbjct: 240 DCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 87
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 87
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 19/283 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V ++ +G A K + ++A K + +A I
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI---------CRKL 62
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + +E+ ++ + V GG + + + E+ +Q+L + Y H
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 187 KNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HR++K N+L+ +K +KLADFG + +V + +G GTP +++PEV+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVL 179
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +S DIW+ G + + G PP W + + A G P + ++ EAK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVME 345
+ L P R TA + L+ P++ + + + R ++
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDXVD 282
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 19/283 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V ++ +G A K + ++A K + +A I
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI---------CRKL 61
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + +E+ ++ + V GG + + + E+ +Q+L + Y H
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 187 KNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HR++K N+L+ +K +KLADFG + +V + +G GTP +++PEV+
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVL 178
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +S DIW+ G + + G PP W + + A G P + ++ EAK
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 238
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVME 345
+ L P R TA + L+ P++ + + + R ++
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDXVD 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W + +G GA G V + +N + E +AVK V + E + I
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-------CINKM 60
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H N+V++ G RE + + LE+ GG + + PE + + QL+ G+ YL
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-L 244
H GI HRDIK N+L+D + +K++DFG + M GT ++APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+ H+ D+WS G + M G+ PW Q
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 21/288 (7%)
Query: 49 AVPALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEK 108
A P + T R++ ++G G+FG V + + +G+ AVK + + K+K
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQK 90
Query: 109 TQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE 168
T HPNI++ + ++ E GG + + F E
Sbjct: 91 TDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
Query: 169 SVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATI 225
+Q+L G+ Y+HKN I+HRD+K N+L+++K I++ DFG S
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THF 202
Query: 226 NGAKSMK---GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
+K MK GT Y++APEV+ T + D+WS G + + +G PP++ E L
Sbjct: 203 EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILK 260
Query: 283 HIGTTKSHPPIPE--HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+ K +P+ +S AKD + K L P +R +A + L H ++
Sbjct: 261 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 21/288 (7%)
Query: 49 AVPALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEK 108
A P + T R++ ++G G+FG V + + +G+ AVK + + K+K
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQK 67
Query: 109 TQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE 168
T HPNI++ + ++ E GG + + F E
Sbjct: 68 TDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 169 SVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATI 225
+Q+L G+ Y+HKN I+HRD+K N+L+++K I++ DFG S
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THF 179
Query: 226 NGAKSMK---GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
+K MK GT Y++APEV L + D+WS G + + +G PP++ E L
Sbjct: 180 EASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILK 237
Query: 283 HIGTTKSHPPIPE--HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+ K +P+ +S AKD + K L P +R +A + L H ++
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 109/249 (43%), Gaps = 19/249 (7%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPGMNLRNSMN 362
DF+ K L KE R T E L+HP++T V R SV +NL N
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV-----------VNLENFRK 299
Query: 363 SLVRRSTGL 371
VRR L
Sbjct: 300 QYVRRRWKL 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 21/288 (7%)
Query: 49 AVPALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEK 108
A P + T R++ ++G G+FG V + + +G+ AVK + + K+K
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQK 91
Query: 109 TQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE 168
T HPNI++ + ++ E GG + + F E
Sbjct: 92 TDKE--SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
Query: 169 SVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATI 225
+Q+L G+ Y+HKN I+HRD+K N+L+++K I++ DFG S
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THF 203
Query: 226 NGAKSMK---GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
+K MK GT Y++APEV+ T + D+WS G + + +G PP++ E L
Sbjct: 204 EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILK 261
Query: 283 HIGTTKSHPPIPE--HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+ K +P+ +S AKD + K L P +R +A + L H ++
Sbjct: 262 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 19/269 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V ++ +G A K + ++A K + +A I
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI---------CRKL 62
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + +E+ ++ + V GG + + + E+ +Q+L + Y H
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 187 KNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
NGI+HR++K N+L+ +K +KLADFG + +V + +G GTP +++PEV+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVL 179
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +S DIW+ G + + G PP W + + A G P + ++ EAK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ L P R TA + L+ P++ +
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNR 268
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 72
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L + + + YT Q+ G+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 69
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANI++ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 128 -ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ + A H+ PIP
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV----REDPIPPSAR 242
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
IV D L+ +L+ + GG + L + G F E+ +R Y +++LGLE++H +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF 250
++RD+K ANIL+D G ++++D G + + + S+ GT +MAPEV LQ G ++
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV-GTHGYMAPEV-LQKGVAY 368
Query: 251 --SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
SAD +S+GC + ++ G P+ Q + T +P+ S E + L
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 309 LQKEPYLR-----STASELLQHPF 327
LQ++ R A E+ + PF
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPF 452
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG VY D+G++ A+K + ++ + P
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
IV D L+ +L+ + GG + L + G F E+ +R Y +++LGLE++H +
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 312
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF 250
++RD+K ANIL+D G ++++D G + + + S+ GT +MAPEV LQ G ++
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV-GTHGYMAPEV-LQKGVAY 367
Query: 251 --SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
SAD +S+GC + ++ G P+ Q + T +P+ S E + L
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 427
Query: 309 LQKEPYLR-----STASELLQHPF 327
LQ++ R A E+ + PF
Sbjct: 428 LQRDVNRRLGCLGRGAQEVKESPF 451
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + ++ + K++ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIV 190
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + H S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVT 329
DF+ K L KE R T E L+HP++T
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 10/268 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+ GE +G G F V +G+ A K I S +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAK--FIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + ++LE V GG + L + S E + KQ+L G+ YL
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 186 HKNGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
H I H D+K NI++ +K IKL DFG + K+ N K++ GTP ++APE
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPE 181
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
++ AD+WS+G + +G P+ + QE + S
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
AKDF+ + L K+P R T ++ L+H ++
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 139 REDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKG 197
++D++L +++++ GG + +LL KF PE + R Y ++++ ++ +H+ +HRDIK
Sbjct: 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKP 203
Query: 198 ANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI--LQTG---HSFSA 252
NIL+D G I+LADFG+ K++E T+ + ++ GTP +++PE++ ++ G +
Sbjct: 204 DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPEC 262
Query: 253 DIWSVGCTVIEMATGKPPWSQQ--FQEVAALFHIGTTKSHPPIPEHLSMEAKDFL--LKC 308
D WS+G + EM G+ P+ + + + + P +S AKD + L C
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC 322
Query: 309 LQKEPYLRSTASELLQHPFVTG 330
++ ++ + +HPF +G
Sbjct: 323 SREHRLGQNGIEDFKKHPFFSG 344
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 17/267 (6%)
Query: 68 KGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
K E++G G FG+V+ +G LA K ++ KE+ + I
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAK-IIKTRGMKDKEEVKNEI-------SVMNQLD 144
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
H N+++ + + +++E+V GG + ++ + + E ++ KQ+ G+ ++H
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
Query: 187 KNGIMHRDIKGANILVDNKGC--IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
+ I+H D+K NIL N+ IK+ DFG +++ + K GTP ++APEV+
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---KVNFGTPEFLAPEVVN 261
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSMEAK 302
SF D+WSVG + +G P+ + L +I + E +S EAK
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-NDAETLNNILACRWDLEDEEFQDISEEAK 320
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVT 329
+F+ K L KE R +ASE L+HP+++
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLS 347
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 16/260 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V +G + +G +AVK + + K ++ + H
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P+I++ +++E+V GG + + K G E R +Q+L ++Y H++
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRD+K N+L+D K+ADFG S + + + ++ G+P + APEVI +G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVI--SGR 185
Query: 249 SFS---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
++ DIWS G + + G P+ + V LF IPE+L+ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFK-KIRGGVFYIPEYLNRSVATLL 242
Query: 306 LKCLQKEPYLRSTASELLQH 325
+ LQ +P R+T ++ +H
Sbjct: 243 MHMLQVDPLKRATIKDIREH 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++GE++AVK++ + T+ H+R
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--------QHSTEEHLRDFEREIEILKSLQ 70
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESV-IRMYTKQLLLGLEY 184
H NIV+Y G +L +++E++P GS+ L K + + + YT Q+ G+EY
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HR++ NILV+N+ +K+ DFG +K + + K +P +W APE +
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
++ S ++D+WS G + E+ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ ++G G+FG V + + +G+ AVK + + K+KT
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQKTDKE--SLLREVQLLK 87
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNI++ + ++ E GG + + F E +Q+L G+ Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 185 LHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMK---GTPYWM 238
+HKN I+HRD+K N+L+++K I++ DFG S +K MK GT Y++
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THFEASKKMKDKIGTAYYI 201
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--H 296
APEV L + D+WS G + + +G PP++ E L + K +P+
Sbjct: 202 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKK 259
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+S AKD + K L P +R +A + L H ++
Sbjct: 260 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
IV D L+ +L+ + GG + L + G F E+ +R Y +++LGLE++H +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF 250
++RD+K ANIL+D G ++++D G + + + S+ GT +MAPEV LQ G ++
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV-GTHGYMAPEV-LQKGVAY 368
Query: 251 --SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
SAD +S+GC + ++ G P+ Q + T +P+ S E + L
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 309 LQKEPYLR-----STASELLQHPF 327
LQ++ R A E+ + PF
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPF 452
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG VY D+G++ A+K + ++ + P
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
IV D L+ +L+ + GG + L + G F E+ +R Y +++LGLE++H +
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSF 250
++RD+K ANIL+D G ++++D G + + + S+ GT +MAPEV LQ G ++
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV-GTHGYMAPEV-LQKGVAY 368
Query: 251 --SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
SAD +S+GC + ++ G P+ Q + T +P+ S E + L
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 309 LQKEPYLR-----STASELLQHPF 327
LQ++ R A E+ + PF
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPF 452
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 69
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANIL+ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 128 -ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ A H+ PIP
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSAR 242
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V +G + +G +AVK + + K ++ + H
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P+I++ +++E+V GG + + K G E R +Q+L ++Y H++
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRD+K N+L+D K+ADFG S + + + + G+P + APEVI +G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RDSCGSPNYAAPEVI--SGR 185
Query: 249 SFS---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
++ DIWS G + + G P+ + V LF IPE+L+ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFK-KIRGGVFYIPEYLNRSVATLL 242
Query: 306 LKCLQKEPYLRSTASELLQH 325
+ LQ +P R+T ++ +H
Sbjct: 243 MHMLQVDPLKRATIKDIREH 262
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 188
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXX 124
+R + +G G F +V + ++ +G +AVK + N S +K +R
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL----- 71
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNIV+ + +L +++E+ GG + L G E R +Q++ ++Y
Sbjct: 72 --NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H+ I+HRD+K N+L+D IK+ADFG S E N + G+P + APE L
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN---EFTVGNKLDTFCGSPPYAAPE--L 184
Query: 245 QTGHSFS---ADIWSVGCTVIEMATGKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLSME 300
G + D+WS+G + + +G P+ Q +E+ G + IP ++S +
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----IPFYMSTD 240
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFVT--------GKYQDPHPVFRNS 342
++ L K L P R + ++++ ++ Y +P P F ++
Sbjct: 241 CENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDT 290
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 188
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
DF+ + L K+P R T + LQHP++ K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 36/293 (12%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K E +G G +G V+ N ++ E++A+K+V + + +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR------EICLLK 56
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
H NIVR D L ++ EF G +++ + QLL GL +
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H ++HRD+K N+L++ G +KLADFG ++ A+ + T ++ P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 245 QTG-HSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALFHIGTTKSHP------ 291
+S S D+WS GC E+A P Q + + L T + P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 292 ---PIPEH------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
P P + L+ +D L L+ P R +A E LQHP+ +
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPN++ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIV 189
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ QE A + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
DF+ + L K+P R T + LQHP++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 69
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANI++ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 128 -ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ A H+ PIP
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSAR 242
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI++ T + ++ + + G + L + + E R + LL + LHK
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NIL+D+ IKL DFG S +L +S+ GTP ++APE+I
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 245 ---QTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
G+ D+WS G + + G PP W ++ + + G + P + S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPF 327
KD + + L +P R TA E L HPF
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 126/269 (46%), Gaps = 18/269 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V + + +G+ A K + ++A K + +A I
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI---------CRLL 78
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPNIVR + E+ ++ + V GG + + + E+ +Q+L + + H
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 187 KNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
+ G++HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE--GEQQAWFGFAGTPGYLSPEVL 196
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + D+W+ G + + G PP W + + G P + ++ EAK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
D + K L P R TA+E L+HP+++ +
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWISHR 285
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 130/264 (49%), Gaps = 20/264 (7%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+F VY G++ ++ +A ++ ++ T++ + HPNI
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCEL------QDRKLTKSERQRFKEEAEXLKGLQHPNI 87
Query: 132 VRYL----GTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
VR+ T + + ++ E G++ + L +F V+R + +Q+L GL++LH
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 188 NG--IMHRDIKGANILVDN-KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I+HRD+K NI + G +K+ D G + L + AK++ GTP + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLG----LATLKRASFAKAVIGTPEFXAPEX-Y 202
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM-EAKD 303
+ + S D+++ G +E AT + P+S + Q A ++ T+ P + +++ E K+
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYS-ECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261
Query: 304 FLLKCLQKEPYLRSTASELLQHPF 327
+ C+++ R + +LL H F
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAF 285
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 69
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 70 --NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANI++ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 128 -ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ A H+ PIP
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSAR 242
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 78/333 (23%)
Query: 67 RKGELV---GCGAFGRVYMGMNLDSGELLAVKQVLIA-ANSASKEKTQAHIRXXXXXXXX 122
RK ELV G GA+G V+ ++ +GE++AVK++ A NS ++T I
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI------MIL 62
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYT-KQLLL 180
H NIV L R D+ ++ L F + +++ + E V + Y QL+
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR--ANILEPVHKQYVVYQLIK 120
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK-------- 232
++YLH G++HRD+K +NIL++ + +K+ADFG S+ V + + +
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 233 -----------GTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP----------- 269
T ++ APE++L T ++ D+WS+GC + E+ GKP
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 270 ---------PWSQQFQEVAALF---HIGTTKSHPPIPE---------------------H 296
P ++ + + + F I + K I +
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
+ EA D L K LQ P R +A++ L+HPFV+
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI+ + ++LE V GG + L + S E + KQ+L G+ YLH
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 188 NGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I H D+K NI++ +K IKL DFG + K+ N K++ GTP ++APE++
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPEIV 204
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
AD+WS+G + +G P+ + QE + S AK
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
DF+ + L K+P R ++ L+H ++
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+ GE +G G F V +G+ A K I S +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAK--FIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + ++LE V GG + L + S E + KQ+L G+ YL
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 186 HKNGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
H I H D+K NI++ +K IKL DFG + K+ N K++ GTP ++APE
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGTPEFVAPE 188
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
++ AD+WS+G + +G P+ + QE + S
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 248
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
AKDF+ + L K+P R ++ L+H ++
Sbjct: 249 AKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 36/293 (12%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K E +G G +G V+ N ++ E++A+K+V + + +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR------EICLLK 56
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
H NIVR D L ++ EF G +++ + QLL GL +
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
H ++HRD+K N+L++ G +KLA+FG ++ A+ + T ++ P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLF 174
Query: 245 QTG-HSFSADIWSVGCTVIEMA-TGKPPW-----SQQFQEVAALFHIGTTKSHP------ 291
+S S D+WS GC E+A G+P + Q + + L T + P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 292 ---PIPEH------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVT 329
P P + L+ +D L L+ P R +A E LQHP+ +
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 69
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANI++ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 128 -ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ A H+ PIP
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSAR 242
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++G G+FG+V + + EL AVK V+I + E T R
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV--ECTMVEKRVLALPGKP---- 401
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
P + + + D L ++E+V GG + + + G F E Y ++ +GL +L
Sbjct: 402 --PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GI++RD+K N+++D++G IK+ADFG K+ + K GTP ++APE+I
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQ 517
Query: 247 GHSFSADIWSVGCTVIEMATGKPPW 271
+ S D W+ G + EM G+ P+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y N +GE++AVK + A + + I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI-------DILRTLY 91
Query: 128 HPNIVRYLGTAREDD--SLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H +I++Y G + SL +++E+VP GS+ L + S + + ++ +Q+ G+ YL
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYL 150
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVIL 244
H +HRD+ N+L+DN +K+ DFG +K V E + +P +W APE +
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 245 QTGHSFSADIWSVGCTVIEMAT 266
+ +++D+WS G T+ E+ T
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI++ T + ++ + + G + L + + E R + LL + LHK
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NIL+D+ IKL DFG S +L + + GTP ++APE+I
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 245 ---QTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
G+ D+WS G + + G PP W ++ + + G + P + S
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 246
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPF 327
KD + + L +P R TA E L HPF
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI++ T + ++ + + G + L + + E R + LL + LHK
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NIL+D+ IKL DFG S +L + + GTP ++APE+I
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 245 ---QTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
G+ D+WS G + + G PP W ++ + + G + P + S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPF 327
KD + + L +P R TA E L HPF
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 17/261 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G+FG+V + + + + +A+K + + +K+ H+R HP
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFI----SRQLLKKSDMHMRVEREISYLKLL-RHP 69
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+I++ + +++E+ GG + + + E R + +Q++ +EY H++
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS 249
I+HRD+K N+L+D+ +K+ADFG S + + N K+ G+P + APEVI G
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI--NGKL 183
Query: 250 FS---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLL 306
++ D+WS G + M G+ P+ +F + LF + + +P+ LS A+ +
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEF--IPNLFKKVNSCVY-VMPDFLSPGAQSLIR 240
Query: 307 KCLQKEPYLRSTASELLQHPF 327
+ + +P R T E+ + P+
Sbjct: 241 RMIVADPMQRITIQEIRRDPW 261
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 62/321 (19%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKE----KTQAHIRXXXXXX 120
++ G+ +G G+FG V +++SG+ A+K+VL ++E K H+
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 121 XXXXXXTH-------PNIVRYLG---------------TAREDDSLNILLEFVPGGSISS 158
P+ LG ++ LN+++E+VP ++
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHK 126
Query: 159 LLGKF----GSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK-GCIKLADF 213
+L F S P ++I +Y QL + ++H GI HRDIK N+LV++K +KL DF
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDF 186
Query: 214 GASKKVVELATINGAKSMKGTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKPPWS 272
G++KK++ + + + ++ APE++L T ++ S D+WS+GC E+ GKP +S
Sbjct: 187 GSAKKLIPSEP---SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243
Query: 273 QQF---QEVAALFHIGT-------------TKSHPP----------IPEHLSMEAKDFLL 306
+ Q V + +GT T+ P +PE A D L
Sbjct: 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303
Query: 307 KCLQKEPYLRSTASELLQHPF 327
+ L+ EP LR E + HPF
Sbjct: 304 QILRYEPDLRINPYEAMAHPF 324
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ GE++G G V++ +L +AVK ++ A+ A R
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVK--VLRADLARDPSFYLRFRREAQNAAAL- 86
Query: 125 XXTHPNIVRYLGTAREDDSLN----ILLEFVPGGSISSLLGKFGSF-PESVIRMYTKQLL 179
HP IV T + I++E+V G ++ ++ G P+ I +
Sbjct: 87 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA-TINGAKSMKGTPYWM 238
L + H+NGI+HRD+K ANI++ +K+ DFG ++ + + ++ ++ GT ++
Sbjct: 145 -ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIP---- 294
+PE +D++S+GC + E+ TG+PP++ A H+ PIP
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSAR 259
Query: 295 -EHLSMEAKDFLLKCLQKEPYLR-STASEL 322
E LS + +LK L K P R TA+E+
Sbjct: 260 HEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI++ + ++ EF GG + + F E KQ+L G+ YLHK
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 188 NGIMHRDIKGANILVDNKGC---IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
+ I+HRDIK NIL++NK IK+ DFG S + + + GT Y++APEV L
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL---RDRLGTAYYIAPEV-L 220
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ ++ D+WS G + + G PP+ Q Q++ G +++S EAK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 304 FLLKCLQKEPYLRSTASELLQHPFV 328
+ L + R TA E L ++
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 10/210 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILL-EFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
HPN++ L E+ + IL+ E V GG + L + S E + KQ+L G+ YLH
Sbjct: 73 HPNVIT-LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 187 KNGIMHRDIKGANILVDNKGC----IKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
I H D+K NI++ ++ IK+ DFG + K+ N K++ GTP ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEI 188
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ AD+WS+G + +G P+ QE A + + S A
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
KDF+ + L K+P R T + LQHP++ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 22/223 (9%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISS--LLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + + ++ E + GG + L KF S E+ ++T + +EYL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYL 137
Query: 186 HKNGIMHRDIKGANIL-VDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW---- 237
H G++HRD+K +NIL VD G C+++ DFG +K +L NG + TP +
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK---QLRAENG---LLMTPCYTANF 191
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPW----SQQFQEVAALFHIGTTKSHPPI 293
+APEV+ + G+ DIWS+G + M G P+ S +E+ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Query: 294 PEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH 336
+S AKD + K L +P+ R TA ++LQHP+VT K + P
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISS--LLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + + ++ E + GG + L KF S E+ ++T + +EYL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYL 137
Query: 186 HKNGIMHRDIKGANIL-VDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW---- 237
H G++HRD+K +NIL VD G C+++ DFG +K +L NG + TP +
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK---QLRAENG---LLMTPCYTANF 191
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPW----SQQFQEVAALFHIGTTKSHPPI 293
+APEV+ + G+ DIWS+G + M G P+ S +E+ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Query: 294 PEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S AKD + K L +P+ R TA ++LQHP+VT K + P
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVK----QVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++G G+FG+V + + EL AVK V+I + + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV--------LALPG 78
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
P + + + D L ++E+V GG + + + G F E Y ++ +GL +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GI++RD+K N+++D++G IK+ADFG K+ + K GTP ++APE+I
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQ 196
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWS 272
+ S D W+ G + EM G+ P+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXX 122
+R G L+G G FG V+ G L +A+K + + S + +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 123 XXXXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLG 181
HP ++R L + ++LE +P + + + G E R + Q++
Sbjct: 93 AGG-GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 182 LEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
+++ H G++HRDIK NIL+D +GC KL DFG+ L GT + P
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGA----LLHDEPYTDFDGTRVYSPP 207
Query: 241 EVI-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
E I H+ A +WS+G + +M G P+ + + + A H P H+S
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELH---------FPAHVSP 258
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+ + +CL +P R + E+L P++ +D
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V +G + +G +AVK + + K ++ + H
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKIL-----NRQKIRSLDVVGKIRREIQNLKLFRH 75
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
P+I++ + +++E+V GG + + K G E R +Q+L G++Y H++
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRD+K N+L+D K+ADFG S + + + + G+P + APEVI +G
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVI--SGR 190
Query: 249 SFS---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
++ DIWS G + + G P+ V LF P++L+ L
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDD--DHVPTLFK-KICDGIFYTPQYLNPSVISLL 247
Query: 306 LKCLQKEPYLRSTASELLQH 325
LQ +P R+T ++ +H
Sbjct: 248 KHMLQVDPMKRATIKDIREH 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y N +GE++AVK + + + I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI-------DILRTLY 74
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H +I++Y G + + SL +++E+VP GS+ L + S + + ++ +Q+ G+ YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYL 133
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVIL 244
H +HR++ N+L+DN +K+ DFG +K V E + +P +W APE +
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 245 QTGHSFSADIWSVGCTVIEMAT 266
+ +++D+WS G T+ E+ T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
+ K + +G G + VY G + + L+A+K++ + E +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-------EHEEGAPCTAIREVSLLKD 56
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE-SVIRMYTKQLLLGLEY 184
H NIV + SL ++ E++ + L G+ ++++ QLL GL Y
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFG-ASKKVVELATINGAKSMKGTPYWMAPEVI 243
H+ ++HRD+K N+L++ +G +KLADFG A K + T + T ++ P+++
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV---TLWYRPPDIL 172
Query: 244 L-QTGHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
L T +S D+W VGC EMATG+P P S +++ +F I T + P LS E
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 301 -------------------------AKDFLLKCLQKEPYLRSTASELLQHPF 327
D L K LQ E R +A + ++HPF
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 15/269 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ ++G G+FG V + + +G+ AVK + + K+KT
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVK---VISKRQVKQKTDKE--SLLREVQLLK 81
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
HPNI + + ++ E GG + + F E +Q+L G+ Y
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 185 LHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
HKN I+HRD+K N+L+++K I++ DFG S K GT Y++APE
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAPE 198
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPE--HLSM 299
V+ T + D+WS G + + +G PP++ E L + K +P+ +S
Sbjct: 199 VLHGT-YDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSE 256
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFV 328
AKD + K L P R +A + L H ++
Sbjct: 257 SAKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y N +GE++AVK + + + I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI-------DILRTLY 74
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H +I++Y G + + SL +++E+VP GS+ L + S + + ++ +Q+ G+ YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYL 133
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVIL 244
H +HR++ N+L+DN +K+ DFG +K V E + +P +W APE +
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 245 QTGHSFSADIWSVGCTVIEMAT 266
+ +++D+WS G T+ E+ T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 59 TDAPPIRWRKGEL-----VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKT 109
T+ P + K L +G G FG+V Y ++GE +AVK S E
Sbjct: 11 TEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVK-------SLKPESG 63
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTARED--DSLNILLEFVPGGSISSLLGKFGSFP 167
HI H NIV+Y G ED + + +++EF+P GS+ L K +
Sbjct: 64 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI 123
Query: 168 ESVIRM-YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN 226
++ Y Q+ G++YL +HRD+ N+LV+++ +K+ DFG +K +
Sbjct: 124 NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 227 GAKSMKGTP-YWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF--H 283
K + +P +W APE ++Q+ ++D+WS G T+ E+ T + ALF
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKM 239
Query: 284 IGTTKSHP---------------PIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
IG T P P + E + KC + +P R++ L++
Sbjct: 240 IGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y ++GE +AVK S E HI
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVK-------SLKPESGGNHIADLKKEIEILRNLY 69
Query: 128 HPNIVRYLGTARED--DSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEY 184
H NIV+Y G ED + + +++EF+P GS+ L K + ++ Y Q+ G++Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ N+LV+++ +K+ DFG +K + K + +P +W APE +
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
+Q+ ++D+WS G T+ E+ T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 14/261 (5%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY+ S ++A+K ++ + KE + +R H
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALK--VLFKSQIEKEGVEHQLRREIEIQAHLH---H 82
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
PNI+R + + ++LE+ P G + L K +F E ++L L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
++HRDIK N+L+ KG +K+ADFG S L K+M GT ++ PE+I H
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPEMIEGRMH 198
Query: 249 SFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLK 307
+ D+W +G E+ G PP+ S E + K P + A+D + K
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNET----YRRIVKVDLKFPASVPTGAQDLISK 254
Query: 308 CLQKEPYLRSTASELLQHPFV 328
L+ P R +++ HP+V
Sbjct: 255 LLRHNPSERLPLAQVSAHPWV 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNIVR + E+ ++ + V GG + + + E+ +Q+L + + H+
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
G++HR++K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE--GEQQAWFGFAGTPGYLSPEVLR 186
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + D+W+ G + + G PP W + + G P + ++ EAKD
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 246
Query: 304 FLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ K L P R TA+E L+HP+++ +
Sbjct: 247 LINKMLTINPSKRITAAEALKHPWISHR 274
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 139 REDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKG 197
++++ L +++++ GG + +LL KF PE + R Y +++L ++ +H+ +HRDIK
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 198 ANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI--LQTG---HSFSA 252
N+L+D G I+LADFG+ K+ + T+ + ++ GTP +++PE++ ++ G +
Sbjct: 220 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPEC 278
Query: 253 DIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH---LSMEAKDFL--LK 307
D WS+G + EM G+ P+ + V I + P H +S EAKD + L
Sbjct: 279 DWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
Query: 308 CLQKEPYLRSTASELLQHPFVTG 330
C ++ ++ + +H F G
Sbjct: 338 CSRERRLGQNGIEDFKKHAFFEG 360
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 139 REDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKG 197
++++ L +++++ GG + +LL KF PE + R Y +++L ++ +H+ +HRDIK
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 198 ANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI--LQTG---HSFSA 252
N+L+D G I+LADFG+ K+ + T+ + ++ GTP +++PE++ ++ G +
Sbjct: 204 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPEC 262
Query: 253 DIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH---LSMEAKDFL--LK 307
D WS+G + EM G+ P+ + V I + P H +S EAKD + L
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
Query: 308 CLQKEPYLRSTASELLQHPFVTG 330
C ++ ++ + +H F G
Sbjct: 322 CSRERRLGQNGIEDFKKHAFFEG 344
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQV---LIAANSASKEKTQAHIRXXXXXXXXXXXX 126
E +G GAF V + L +G A K + ++A K + +A I
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI---------CRLL 60
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
H NIVR + E+ ++ + V GG + + + E+ +Q+L + + H
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 187 KNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
+ G++HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSPEVL 178
Query: 244 LQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ + DIW+ G + + G PP W + ++ G P + ++ EAK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ + + L P R TA E L+HP+V +
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQR 267
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V ++ SG +AVK++ + ++ H +
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL------SRPFQSIIHAKRTYRELRL 103
Query: 123 XXXXTHPNIVRYL-----GTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L T+ E+ + L+ + G +++++ K + ++ Q
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 162
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 217
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTKSHPPIP 294
APE++L H + + DIWSVGC + E+ TG+ P + ++ + + T I
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVIS 277
Query: 295 EHLSMEAK--------------------------DFLLKCLQKEPYLRSTASELLQHPFV 328
S EA+ D L K L + R TASE L HP+
Sbjct: 278 RMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
Query: 329 TGKYQDP 335
+ +Y DP
Sbjct: 338 S-QYHDP 343
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 135/312 (43%), Gaps = 78/312 (25%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQV-------LIAANSASKEKTQAHIRXXXX 118
+R + VG GA+G V ++ +G +A+K++ L A + + + H+R
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR---- 82
Query: 119 XXXXXXXXTHPNIVRYLGTAREDDSLNILLEF---VP--GGSISSLLGKFGSFPESVIRM 173
H N++ L D++L+ +F +P G + L+ K E I+
Sbjct: 83 ---------HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-KHEKLGEDRIQF 132
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Q+L GL Y+H GI+HRD+K N+ V+ +K+ DFG +++ M G
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ--------ADSEMXG 184
Query: 234 ---TPYWMAPEVILQ-TGHSFSADIWSVGCTVIEMATGKPPW--SQQFQEVAALFHIGTT 287
T ++ APEVIL ++ + DIWSVGC + EM TGK + S ++ + + T
Sbjct: 185 XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244
Query: 288 KSHPP------------------IPEHLSMEAKDF--------------LLKCLQKEPYL 315
PP +PE +E KDF L K L +
Sbjct: 245 ---PPAEFVQRLQSDEAKNYMKGLPE---LEKKDFASILTNASPLAVNLLEKMLVLDAEQ 298
Query: 316 RSTASELLQHPF 327
R TA E L HP+
Sbjct: 299 RVTAGEALAHPY 310
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y N +GE++AVK + + Q I
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY------- 68
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H +IV+Y G + + S+ +++E+VP GS+ L + ++ ++ +Q+ G+ YL
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-LFAQQICEGMAYL 127
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVIL 244
H +HR + N+L+DN +K+ DFG +K V E + +P +W APE +
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 245 QTGHSFSADIWSVGCTVIEMAT 266
+ +++D+WS G T+ E+ T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG+V Y N +GE++AVK + + Q I
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY------- 69
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYL 185
H +IV+Y G + + S+ +++E+VP GS+ L + ++ ++ +Q+ G+ YL
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-LFAQQICEGMAYL 128
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVIL 244
H +HR + N+L+DN +K+ DFG +K V E + +P +W APE +
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 245 QTGHSFSADIWSVGCTVIEMAT 266
+ +++D+WS G T+ E+ T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 22/288 (7%)
Query: 44 LFSKPAVPALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANS 103
LF P + P+E +++ G L+G G FG VY G+ + +A+K V S
Sbjct: 17 LFQGPHMKEKEPLES------QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 70
Query: 104 ASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGK 162
E ++R L DS ++LE P + + +
Sbjct: 71 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 130
Query: 163 FGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVE 221
G+ E + R + Q+L + + H G++HRDIK NIL+D N+G +KL DFG+ + +
Sbjct: 131 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 190
Query: 222 LATINGAKSMKGTPYWMAPEVI-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAA 280
+ GT + PE I H SA +WS+G + +M G P+ +E+
Sbjct: 191 TVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI-- 243
Query: 281 LFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + +S E + + CL P R T E+ HP++
Sbjct: 244 ------IRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISS--LLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + + ++ E + GG + L KF S E+ ++T + +EYL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYL 132
Query: 186 HKNGIMHRDIKGANIL-VDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW---- 237
H G++HRD+K +NIL VD G I++ DFG +K +L NG + TP +
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK---QLRAENG---LLMTPCYTANF 186
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS----QQFQEVAALFHIGTTKSHPPI 293
+APEV+ + G+ + DIWS+G + M TG P++ +E+ A G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY 246
Query: 294 PEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S AKD + K L +P+ R TA+ +L+HP++ Q P
Sbjct: 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLP 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNIVR + E+ ++ + V GG + + + E+ Q+L + ++H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
+ I+HRD+K N+L+ +K +KLADFG + +V GTP +++PEV+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ--GEQQAWFGFAGTPGYLSPEVLR 206
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ + DIW+ G + + G PP W + ++ G P + ++ EAK+
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 266
Query: 304 FLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ + L P R TA + L+HP+V +
Sbjct: 267 LINQMLTINPAKRITADQALKHPWVCQR 294
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFV-PGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE + P + + + G+ E + R + Q+L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 184
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 235
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 117
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 177 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 295
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 331
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 36/291 (12%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
EL+G GA+ +V ++L +G+ AVK + K+ + R +
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKII-------EKQAGHSRSRVFREVETLYQCQGNK 71
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
NI+ + +D ++ E + GGSI + + K F E + + L++LH G
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 190 IMHRDIKGANILVDNK---GCIKLADF--GASKKVVELATINGAKSMK---GTPYWMAPE 241
I HRD+K NIL ++ +K+ DF G+ K+ T + G+ +MAPE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 242 VI-----LQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHP 291
V+ T + D+WS+G + M +G PP+ + + + K
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 251
Query: 292 PIPE-----------HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
I E H+S EAKD + K L ++ R +A+++LQHP+V G+
Sbjct: 252 SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQ 302
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V+ +G+L A K++ K A + H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK------VHSR 245
Query: 131 IVRYLGTAREDDS-LNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+ L A E + L +++ + GG I + F E YT Q++ GLE+L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVEL-ATINGAKSMKGTPYWMAPEVIL 244
H+ I++RD+K N+L+D+ G ++++D G + VEL A K GTP +MAPE++L
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVA-ALFHIGTTKSHPPIPEHLSMEAKD 303
+ FS D +++G T+ EM + P+ + ++V + P+ S +KD
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 304 FLLKCLQKEPYLR 316
F LQK+P R
Sbjct: 423 FCEALLQKDPEKR 435
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 200
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 251
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V+ +G+L A K++ K A + H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK------VHSR 245
Query: 131 IVRYLGTAREDDS-LNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+ L A E + L +++ + GG I + F E YT Q++ GLE+L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVEL-ATINGAKSMKGTPYWMAPEVIL 244
H+ I++RD+K N+L+D+ G ++++D G + VEL A K GTP +MAPE++L
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVA-ALFHIGTTKSHPPIPEHLSMEAKD 303
+ FS D +++G T+ EM + P+ + ++V + P+ S +KD
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 304 FLLKCLQKEPYLR 316
F LQK+P R
Sbjct: 423 FCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V+ +G+L A K++ K A + H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK------VHSR 245
Query: 131 IVRYLGTAREDDS-LNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+ L A E + L +++ + GG I + F E YT Q++ GLE+L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVEL-ATINGAKSMKGTPYWMAPEVIL 244
H+ I++RD+K N+L+D+ G ++++D G + VEL A K GTP +MAPE++L
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVA-ALFHIGTTKSHPPIPEHLSMEAKD 303
+ FS D +++G T+ EM + P+ + ++V + P+ S +KD
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 304 FLLKCLQKEPYLR 316
F LQK+P R
Sbjct: 423 FCEALLQKDPEKR 435
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 117
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 177 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 295
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 331
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V+ +G+L A K++ K A + H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK------VHSR 245
Query: 131 IVRYLGTAREDDS-LNILLEFVPGGSISSLLGKFGS----FPESVIRMYTKQLLLGLEYL 185
+ L A E + L +++ + GG I + F E YT Q++ GLE+L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVEL-ATINGAKSMKGTPYWMAPEVIL 244
H+ I++RD+K N+L+D+ G ++++D G + VEL A K GTP +MAPE++L
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVA-ALFHIGTTKSHPPIPEHLSMEAKD 303
+ FS D +++G T+ EM + P+ + ++V + P+ S +KD
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 304 FLLKCLQKEPYLR 316
F LQK+P R
Sbjct: 423 FCEALLQKDPEKR 435
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 51 PALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQ 110
P+LP +T P W E +G G FG V ++ D+GE +A+KQ + ++E+
Sbjct: 7 PSLPT--QTCGP---WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 61
Query: 111 AHIRXXXXXXXXXXXXTHPNIVRYLGTARE-DDSLNIL---------LEFVPGGSISSLL 160
I+ HPN+V +ARE D L L +E+ GG + L
Sbjct: 62 LEIQIMKKL-------NHPNVV----SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 110
Query: 161 GKFGS---FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVD---NKGCIKLADFG 214
+F + E IR + L YLH+N I+HRD+K NI++ + K+ D G
Sbjct: 111 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 170
Query: 215 ASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+K EL GT ++APE++ Q ++ + D WS G E TG P+
Sbjct: 171 YAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
Query: 275 FQEV 278
+Q V
Sbjct: 228 WQPV 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 51 PALPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQ 110
P+LP +T P W E +G G FG V ++ D+GE +A+KQ + ++E+
Sbjct: 6 PSLPT--QTCGP---WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60
Query: 111 AHIRXXXXXXXXXXXXTHPNIVRYLGTARE-DDSLNIL---------LEFVPGGSISSLL 160
I+ HPN+V +ARE D L L +E+ GG + L
Sbjct: 61 LEIQIMKKL-------NHPNVV----SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109
Query: 161 GKFGS---FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVD---NKGCIKLADFG 214
+F + E IR + L YLH+N I+HRD+K NI++ + K+ D G
Sbjct: 110 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169
Query: 215 ASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+K EL GT ++APE++ Q ++ + D WS G E TG P+
Sbjct: 170 YAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
Query: 275 FQEV 278
+Q V
Sbjct: 227 WQPV 230
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 145/315 (46%), Gaps = 66/315 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ + +GCG G V+ ++ D + +A+K++++ + K +
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE--------IKIIR 63
Query: 125 XXTHPNIVRY--------------LGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESV 170
H NIV+ +G+ E +S+ I+ E++ ++++L + G E
Sbjct: 64 RLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEH 121
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCI-KLADFGASKKVVELATINGAK 229
R++ QLL GL+Y+H ++HRD+K AN+ ++ + + K+ DFG ++ ++
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR------IMDPHY 175
Query: 230 SMKG-------TPYWMAPEVILQ-TGHSFSADIWSVGCTVIEMATGKPPWS--------- 272
S KG T ++ +P ++L ++ + D+W+ GC EM TGK ++
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 273 -----------QQFQEVAALFHI----GTTKSHPPIPEHL---SMEAKDFLLKCLQKEPY 314
+ QE+ ++ + T+ H P+ + L S EA DFL + L P
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 315 LRSTASELLQHPFVT 329
R TA E L HP+++
Sbjct: 296 DRLTAEEALSHPYMS 310
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 200
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 251
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 199
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 250
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 20 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 73
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 133 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 251
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 252 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 287
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 36 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 89
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 149 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 267
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 303
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 180
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 231
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 17 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-----DK 70
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 130 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 248
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 284
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 72 VGCGAFGRVYMG--MNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
+G GAFG+V++ NL L+AVK + A+++A K+ +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE--------AELLTNL 72
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG-------------SFPESVIRM 173
H +IV++ G E D L ++ E++ G ++ L G +S +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
+Q+ G+ YL +HRD+ N LV +K+ DFG S+ V
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQ-QFQEVAALFHIGTTKSHP 291
WM PE I+ + +D+WS+G + E+ T GK PW Q EV G P
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252
Query: 292 -PIPEHLSMEAKDFLLKCLQKEPYLR 316
P+ E + +L C Q+EP++R
Sbjct: 253 RTCPQ----EVYELMLGCWQREPHMR 274
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 213
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 264
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 185
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 236
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 232
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 283
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
VG GA+G V ++ SGE +A+K++ + +++ + H N+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL------SRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 132 VRYLGTAREDDSLNILLEF-----VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+ L SL +F + ++G F E I+ Q+L GL+Y+H
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIH 161
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG---TPYWMAPEVI 243
G++HRD+K N+ V+ +K+ DFG ++ + M G T ++ APEVI
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRWYRAPEVI 213
Query: 244 LQTGH-SFSADIWSVGCTVIEMATGKP-----------------------PWSQQFQEVA 279
L H + + DIWSVGC + EM TGK + Q+ + A
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 280 ALFHIGTTKSHP-----PIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
A +I + P + S +A D L K L+ + R TA++ L HPF ++D
Sbjct: 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE-PFRD 332
Query: 335 P 335
P
Sbjct: 333 P 333
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 200
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 251
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 227
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 278
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 199
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 250
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 66
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++ + D + +++E+ G + + + E R + +Q++ +EY H++ I+
Sbjct: 67 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRD+K N+L+D +K+ADFG S + + N K+ G+P + APEVI +G ++
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI--SGKLYA 180
Query: 252 ---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 237
Query: 309 LQKEPYLRSTASELLQ 324
L P R + E++Q
Sbjct: 238 LIVNPLNRISIHEIMQ 253
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++ + D + +++E+ G + + + E R + +Q++ +EY H++ I+
Sbjct: 77 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 135
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRD+K N+L+D +K+ADFG S + + N K+ G+P + APEVI +G ++
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI--SGKLYA 190
Query: 252 ---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 247
Query: 309 LQKEPYLRSTASELLQ 324
L P R + E++Q
Sbjct: 248 LIVNPLNRISIHEIMQ 263
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 227
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSXEC 278
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 212
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 263
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 213
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSXEC 264
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++ + D + +++E+ G + + + E R + +Q++ +EY H++ I+
Sbjct: 76 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 134
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRD+K N+L+D +K+ADFG S + + N K+ G+P + APEVI +G ++
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI--SGKLYA 189
Query: 252 ---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 246
Query: 309 LQKEPYLRSTASELLQ 324
L P R + E++Q
Sbjct: 247 LIVNPLNRISIHEIMQ 262
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + G G FG V +G +G +A+K+V+ ++E
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---------LQIMQDLA 74
Query: 125 XXTHPNIVR---YLGTA----REDDSLNILLEFVPGG---SISSLLGKFGSFPESVIRMY 174
HPNIV+ Y T R D LN+++E+VP + + + P +I+++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 175 TKQLL--LGLEYLHKNGIMHRDIKGANILVDN-KGCIKLADFGASKKVVELATINGAKSM 231
QL+ +G +L + HRDIK N+LV+ G +KL DFG++KK L+ +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK---LSPSEPNVAY 191
Query: 232 KGTPYWMAPEVILQTGHSFSA-DIWSVGCTVIEMATGKP 269
+ Y+ APE+I H +A DIWSVGC EM G+P
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+GCG FG V G+ + KQ+ +A + +A +P I
Sbjct: 18 LGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISS-LLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
VR +G + ++L +++E GG + L+GK P S + Q+ +G++YL +
Sbjct: 73 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEVILQTGHS 249
+HRD+ N+L+ N+ K++DFG SK + + A+S P W APE I S
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 250 FSADIWSVGCTVIE-MATGKPPWSQ-QFQEVAALFHIGTTKSHPP 292
+D+WS G T+ E ++ G+ P+ + + EV A G PP
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 236
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G F +V + ++ +GE++A+K + K + + H
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIM-------DKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+I + + + ++LE+ PGG + + E R+ +Q++ + Y+H G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 190 IMHRDIKGANILVDNKGCIKLADFGAS-----KKVVELATINGAKSMKGTPYWMAPEVIL 244
HRD+K N+L D +KL DFG K L T G+ + + APE+I
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA------YAAPELI- 181
Query: 245 QTGHSF---SADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
G S+ AD+WS+G + + G P+ V AL+ + +P+ LS +
Sbjct: 182 -QGKSYLGSEADVWSMGILLYVLMCGFLPFDD--DNVMALYK-KIMRGKYDVPKWLSPSS 237
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
L + LQ +P R + LL HP++ Y P
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S GT +M PE I S
Sbjct: 129 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 247
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 248 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 283
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG+V + + +G+ +A+K +I +K Q I HP+I
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLL---RHPHI 70
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIM 191
++ + D + +++E+ G + + + E R + +Q++ +EY H++ I+
Sbjct: 71 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 129
Query: 192 HRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFS 251
HRD+K N+L+D +K+ADFG S + + N K+ G+P + APEVI +G ++
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVI--SGKLYA 184
Query: 252 ---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKC 308
D+WS G + M + P+ + + LF + +P+ LS A + +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFK-NISNGVYTLPKFLSPGAAGLIKRM 241
Query: 309 LQKEPYLRSTASELLQ 324
L P R + E++Q
Sbjct: 242 LIVNPLNRISIHEIMQ 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 184
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 235
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 185
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 236
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 219
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 270
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 212
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 263
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 185
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 236
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
VG GA+G V ++ SGE +A+K++ + +++ + H N+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL------SRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 132 VRYLGTAREDDSLNILLEF-----VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+ L SL +F + ++G F E I+ Q+L GL+Y+H
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIH 143
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG---TPYWMAPEVI 243
G++HRD+K N+ V+ +K+ DFG ++ + M G T ++ APEVI
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRWYRAPEVI 195
Query: 244 LQTGH-SFSADIWSVGCTVIEMATGKP-----------------------PWSQQFQEVA 279
L H + + DIWSVGC + EM TGK + Q+ + A
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 280 ALFHIGTTKSHP-----PIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
A +I + P + S +A D L K L+ + R TA++ L HPF ++D
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE-PFRD 314
Query: 335 P 335
P
Sbjct: 315 P 315
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 212
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 263
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 213
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 264
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 183
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 234
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 213
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 264
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 212
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 263
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 180
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ +E+ + + +S E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSEC 231
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
VG GA+G V + + +AVK++ + ++ H R H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKL------SRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 132 VRYL-----GTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+ L T+ ED S L+ + G +++++ K + + ++ QLL GL+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GI+HRD+K +N+ V+ +++ DFG +++ E T T ++ APE++L
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLNW 203
Query: 247 GH-SFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT---------------- 287
H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 288 --KSHPPIPEH-LSM-------EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S PP+P+ LS A D L + L + R +A+E L H + + +Y DP
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS-QYHDP 320
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
VG GA+G V + + +AVK++ + ++ H R H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKL------SRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 132 VRYL-----GTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+ L T+ ED S L+ + G +++++ K + + ++ QLL GL+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GI+HRD+K +N+ V+ +++ DFG +++ E T T ++ APE++L
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLNW 203
Query: 247 GH-SFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT---------------- 287
H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 288 --KSHPPIPEH-LSM-------EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S PP+P+ LS A D L + L + R +A+E L H + + +Y DP
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS-QYHDP 320
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GAFG+V++ + L K ++ A A K+ T A + H +I
Sbjct: 23 LGEGAFGKVFLA---ECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM------------------ 173
V++ G + D L ++ E++ G ++ L G P+++I +
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG--PDAMILVDGQPRQAKGELGLSQMLH 137
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Q+ G+ YL +HRD+ N LV +K+ DFG S+ V
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQ-QFQEVAALFHIGTTKSHP 291
WM PE I+ + +D+WS G + E+ T GK PW Q EV G P
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
Query: 292 PIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+ E D +L C Q+EP R E+ + GK
Sbjct: 258 RV---CPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGK 294
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 29/270 (10%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G+FG VY G G++ AVK ++ + E+ QA H NI
Sbjct: 44 IGSGSFGTVYKGKW--HGDV-AVK--ILKVVDPTPEQFQAF----RNEVAVLRKTRHVNI 94
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
+ ++G +D+ L I+ ++ G S+ L KF F I T Q G++YLH
Sbjct: 95 LLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ---GMDYLHA 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
I+HRD+K NI + +K+ DFG + + + G+ WMAPEVI
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 248 H---SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPI-------PEHL 297
+ SF +D++S G + E+ TG+ P+S +F +G + P + P+ +
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270
Query: 298 SMEAKDFLLKCLQKEPYLRSTAS--ELLQH 325
D + K ++ P S ELLQH
Sbjct: 271 KRLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 36 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 89
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ S GT +M PE I S
Sbjct: 149 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 267
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 303
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
+++ G L+G G FG VY G+ + +A+K V S E
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLE 183
++R L DS ++LE P + + + G+ E + R + Q+L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 184 YLHKNGIMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
+ H G++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEW 180
Query: 243 I-LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
I H SA +WS+G + +M G P+ + + + +S E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR---------QRVSSEC 231
Query: 302 KDFLLKCLQKEPYLRSTASELLQHPFV 328
+ + CL P R T E+ HP++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 33/269 (12%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GE +G G FG V+ G L+AVK K K R +H
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-------SH 171
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------LG 181
PNIVR +G + + I++E V GG + L G+ R+ K LL G
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAG 225
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAP 240
+EYL +HRD+ N LV K +K++DFG S++ + + ++ P W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-GVYAASGGLRQVPVKWTAP 284
Query: 241 EVILQTGHSFSADIWSVGCTVIE-MATGKPPW----SQQFQEVAALFHIGTTKSHPPIPE 295
E + +S +D+WS G + E + G P+ +QQ +E P PE
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPE 338
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+ +C EP R + S + Q
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 33/269 (12%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
GE +G G FG V+ G L+AVK K K R +H
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-------SH 171
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------LG 181
PNIVR +G + + I++E V GG + L G+ R+ K LL G
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAG 225
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAP 240
+EYL +HRD+ N LV K +K++DFG S++ + + ++ P W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-GVXAASGGLRQVPVKWTAP 284
Query: 241 EVILQTGHSFSADIWSVGCTVIE-MATGKPPW----SQQFQEVAALFHIGTTKSHPPIPE 295
E + +S +D+WS G + E + G P+ +QQ +E P PE
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRLPCPE 338
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+ +C EP R + S + Q
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G GAFG V++ SG +K + +K+++Q + HPNI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTI-------NKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 132 VRYLGTAREDDSLNILLEFVPGGS----ISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
++ + ++ I++E GG I S + + E + KQ++ L Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 188 NGIMHRDIKGANILVDN---KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
++H+D+K NIL + IK+ DFG ++ + + + GT +MAPEV
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL---FKSDEHSTNAAGTALYMAPEV-F 198
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWS----QQFQEVAALFHIGTTKSHPPIPEHLSME 300
+ +F DIWS G + + TG P++ ++ Q+ A P L+ +
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP----LTPQ 254
Query: 301 AKDFLLKCLQKEPYLRSTASELLQH 325
A D L + L K+P R +A+++L H
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISS--LLGKFGSFPESVIRMYTKQLLLGLEYL 185
HPNI+ + + ++ E GG + L KF S E+ ++T + +EYL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYL 132
Query: 186 HKNGIMHRDIKGANIL-VDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW---- 237
H G++HRD+K +NIL VD G I++ DFG +K +L NG + TP +
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK---QLRAENG---LLXTPCYTANF 186
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS----QQFQEVAALFHIGTTKSHPPI 293
+APEV+ + G+ + DIWS+G + TG P++ +E+ A G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY 246
Query: 294 PEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S AKD + K L +P+ R TA+ +L+HP++ Q P
Sbjct: 247 WNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLP 288
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 23/279 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQV-LIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
+G G +V+ +N + ++ A+K V L A++ + + + I
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD-----K 117
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
I+R D + +++E ++S L K S + Y K +L + +H++GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS- 249
+H D+K AN L+ + G +KL DFG + ++ T S G +M PE I S
Sbjct: 177 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 250 ----------FSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
+D+WS+GC + M GK P+ Q +++ L I P+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 295
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPV 338
+ +D L CL+++P R + ELL HP+V + HPV
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ---THPV 331
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 47/298 (15%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
VG GA+G V + + +AVK++ + ++ H R H N+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKL------SRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 132 VRYL-----GTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
+ L T+ ED S L+ + G +++++ K + + ++ QLL GL+Y+H
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GI+HRD+K +N+ V+ +++ DFG +++ E T T ++ APE++L
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATRWYRAPEIMLNW 195
Query: 247 GH-SFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT---------------- 287
H + + DIWSVGC + E+ GK P S ++ + + T
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 288 --KSHPPIPEH-LSM-------EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+S PP+P+ LS A D L + L + R +A+E L H + + +Y DP
Sbjct: 256 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS-QYHDP 312
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+GCG FG V G+ + KQ+ +A + +A +P I
Sbjct: 344 LGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISS-LLGKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
VR +G + ++L +++E GG + L+GK P S + Q+ +G++YL +
Sbjct: 399 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEVILQTGHS 249
+HR++ N+L+ N+ K++DFG SK + + A+S P W APE I S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 250 FSADIWSVGCTVIE-MATGKPPWSQ-QFQEVAALFHIGTTKSHPP 292
+D+WS G T+ E ++ G+ P+ + + EV A G PP
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 562
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV------LIAANSASKEKTQAHIRXXXXXXXXXX 124
L+G GA+G V + +GE++A+K++ L A + + K H +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK---------- 67
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS---FPESVIRMYTKQLLLG 181
H NI+ R D N ++ + + L + S + I+ + Q L
Sbjct: 68 ---HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN--------GAKSMKG 233
++ LH + ++HRD+K +N+L+++ +K+ DFG ++ + E A N G
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 234 TPYWMAPEVILQTG-HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT--- 287
T ++ APEV+L + +S + D+WS GC + E+ +P P ++ +F I T
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 288 ----------------KSHPPIPE--------HLSMEAKDFLLKCLQKEPYLRSTASELL 323
KS P P ++ + D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 324 QHPFVTGKYQDP 335
+HP++ Y DP
Sbjct: 305 EHPYLQT-YHDP 315
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV------LIAANSASKEKTQAHIRXXXXXXXXXX 124
L+G GA+G V + +GE++A+K++ L A + + K H +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK---------- 67
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS---FPESVIRMYTKQLLLG 181
H NI+ R D N ++ + + L + S + I+ + Q L
Sbjct: 68 ---HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN--------GAKSMKG 233
++ LH + ++HRD+K +N+L+++ +K+ DFG ++ + E A N G
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 234 TPYWMAPEVILQTG-HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT--- 287
T ++ APEV+L + +S + D+WS GC + E+ +P P ++ +F I T
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 288 ----------------KSHPPIPE--------HLSMEAKDFLLKCLQKEPYLRSTASELL 323
KS P P ++ + D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 324 QHPFVTGKYQDP 335
+HP++ Y DP
Sbjct: 305 EHPYLQT-YHDP 315
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQV------LIAANSASKEKTQAHIRXXXXXXXXXX 124
L+G GA+G V + +GE++A+K++ L A + + K H +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK---------- 67
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGS---FPESVIRMYTKQLLLG 181
H NI+ R D N ++ + + L + S + I+ + Q L
Sbjct: 68 ---HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN--------GAKSMKG 233
++ LH + ++HRD+K +N+L+++ +K+ DFG ++ + E A N G
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 234 TPYWMAPEVILQTG-HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTT--- 287
T ++ APEV+L + +S + D+WS GC + E+ +P P ++ +F I T
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 288 ----------------KSHPPIPE--------HLSMEAKDFLLKCLQKEPYLRSTASELL 323
KS P P ++ + D L + L +P R TA E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 324 QHPFVTGKYQDP 335
+HP++ Y DP
Sbjct: 305 EHPYLQT-YHDP 315
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 129/296 (43%), Gaps = 48/296 (16%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT-- 127
+++G GA RV +NL + + AVK + EK HIR
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII---------EKQPGHIRSRVFREVEMLYQCQG 69
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + E+D ++ E + GGSI S + K F E + + + L++LH
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 188 NGIMHRDIKGANILVDNKGC---IKLADFGASKKVVELATINGAKSMKGTP--------- 235
GI HRD+K NIL ++ +K+ DFG + +NG S TP
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI----KLNGDCSPISTPELLTPCGSA 185
Query: 236 YWMAPEVILQTGHSFS-----ADIWSVGCTVIEMATGKPP----------WSQQFQEVAA 280
+MAPEV+ S D+WS+G + + +G PP W + A
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 281 ---LFH-IGTTKSHPPIPE--HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
LF I K P + H+S AKD + K L ++ R +A+++LQHP+V G
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 166 FPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATI 225
FP Y QL+ GLEYLH GI+H+DIK N+L+ G +K++ G ++ + A
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 226 NGAKSMKGTPYWMAPEVI--LQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF- 282
+ ++ +G+P + PE+ L T F DIWS G T+ + TG P+ + + LF
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF--EGDNIYKLFE 223
Query: 283 HIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
+IG K IP D L L+ EP R + ++ QH + K+
Sbjct: 224 NIG--KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R +
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 125
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYLHK 187
N+ Y G L I++E + GG + S + G +F E K + ++YLH
Sbjct: 126 NL--YAGRK----CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I HRD+K N+L +K +KL DFG +K E + N + TPY++APEV+
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPEHLSM 299
+ S D+WS+G + + G PP+ + +G + P +S
Sbjct: 237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 296
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 347
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 75
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 136 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 192
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 193 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 252
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 253 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 307
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R +
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 81
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYLHK 187
N+ Y G L I++E + GG + S + G +F E K + ++YLH
Sbjct: 82 NL--YAGRK----CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I HRD+K N+L +K +KL DFG +K E + N + TPY++APEV+
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPEHLSM 299
+ S D+WS+G + + G PP+ + +G + P +S
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 252
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 303
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 77
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 138 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 194
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 195 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 254
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 255 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 309
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 69
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 186
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 246
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 301
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R +
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 81
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYLHK 187
N+ Y G L I++E + GG + S + G +F E K + ++YLH
Sbjct: 82 NL--YAGRK----CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I HRD+K N+L +K +KL DFG +K E + N + TPY++APEV+
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPEHLSM 299
+ S D+WS+G + + G PP+ + +G + P +S
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 252
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 253 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 303
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 85
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 146 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 202
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 203 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 262
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 263 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 317
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 76
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 137 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 193
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 194 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 253
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 254 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 308
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 121
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 182 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 238
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 239 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 298
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 299 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 353
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R P
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQC----------P 70
Query: 130 NIVR----YLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IVR Y L I++E + GG + S + G +F E K + ++
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
YLH I HRD+K N+L +K +KL DFG +K E + N + TPY++AP
Sbjct: 131 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAP 187
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPE 295
EV+ + S D+WS+G + + G PP+ + +G + P
Sbjct: 188 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 247
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
+S E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 248 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 302
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 91
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVI
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 271 KRLMAECLKKK 281
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 29/274 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G GAFG V+ + +G + K + K + I HP
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAK-FINTPYPLDKYTVKNEI-------SIMNQLHHP 108
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
++ + + ++LEF+ GG + + + E+ + Y +Q GL+++H++
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 189 GIMHRDIKGANILVDNK--GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
I+H DIK NI+ + K +K+ DFG + K L K T + APE++ +
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATK---LNPDEIVKVTTATAEFAAPEIVDRE 225
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVAALFHIGTTKSHPPIPEHLS 298
F D+W++G + +G P++ Q + F S P
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP------ 279
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
EAKDF+ LQKEP R T + L+HP++ G +
Sbjct: 280 -EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 33 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 83
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 84 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVI
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 263 KRLMAECLKKK 273
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 22/291 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K ++ ++ + + H R +
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 79
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYLHK 187
N+ Y G L I++E + GG + S + G +F E K + ++YLH
Sbjct: 80 NL--YAGRK----CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I HRD+K N+L +K +KL DFG +K E + N TPY++APEV+
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLG 190
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF-----QEVAALFHIGTTKSHPPIPEHLSM 299
+ S D+WS+G + + G PP+ + +G + P +S
Sbjct: 191 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 250
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
E K + L+ EP R T +E + HP++ + P P+ + V++ +
Sbjct: 251 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 301
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G GAFG V+ +G A K V+ + + KE + I+ HP
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVM-TPHESDKETVRKEIQTMSVLR-------HP 108
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
+V +D+ + ++ EF+ GG + + + E Y +Q+ GL ++H+N
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 189 GIMHRDIKGANILVDNKGC--IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
+H D+K NI+ K +KL DFG + L K GT + APEV
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH--LSMEAKDF 304
+ D+WSVG + +G P+ + + L ++ + + +S + KDF
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDF 284
Query: 305 LLKCLQKEPYLRSTASELLQHPFVT 329
+ K L +P R T + L+HP++T
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G GAFG V+ +G A K V+ + + KE + I+ HP
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVM-TPHESDKETVRKEIQTMSVLR-------HP 214
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKN 188
+V +D+ + ++ EF+ GG + + + E Y +Q+ GL ++H+N
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 189 GIMHRDIKGANILVDNKGC--IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
+H D+K NI+ K +KL DFG + L K GT + APEV
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 247 GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH--LSMEAKDF 304
+ D+WSVG + +G P+ + + L ++ + + +S + KDF
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 305 LLKCLQKEPYLRSTASELLQHPFVT 329
+ K L +P R T + L+HP++T
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W +++G GA V+ G + +G+L A+K + N + +R
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQMREFEVLKKL--- 64
Query: 126 XTHPNIVRYLGTAREDDSLN--ILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLL 179
H NIV+ E + + +++EF P GS+ ++L +G PES + + ++
Sbjct: 65 -NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVV 122
Query: 180 LGLEYLHKNGIMHRDIKGANILV----DNKGCIKLADFGASKKVVELATINGAKSMKGTP 235
G+ +L +NGI+HR+IK NI+ D + KL DFGA++ EL S+ GT
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFVSLYGTE 179
Query: 236 YWMAPEV----ILQTGHS----FSADIWSVGCTVIEMATGKPPW 271
++ P++ +L+ H + D+WS+G T ATG P+
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 63
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVI
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 243 KRLMAECLKKK 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 38/299 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYM----GMNLDSGELLAVKQVLIAANSASKEK 108
LP K + P + G+ +G GAFG+V M G++ D + V + + A++E
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED 83
Query: 109 TQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLV---SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 162 ----KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLAD 212
PE + T QL G+EYL +HRD+ N+LV +K+AD
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 213 FGASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-- 266
FG ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 267 GKPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
G P +E+ L G P L M +D C P R T +L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G +G VY N + GE A+K++ + T IR H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTT--IREISILKELK----HS 60
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI-RMYTKQLLLGLEYLHKN 188
NIV+ L ++ E + + LL ESV + + QLL G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT-G 247
++HRD+K N+L++ +G +K+ADFG ++ + T ++ AP+V++ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 248 HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHI-GTTKS--------------- 289
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 290 ---HPPIP-----EHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+ P+P + L D L K L+ +P R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G +G VY N + GE A+K++ + T IR H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTT--IREISILKEL----KHS 60
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI-RMYTKQLLLGLEYLHKN 188
NIV+ L ++ E + + LL ESV + + QLL G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT-G 247
++HRD+K N+L++ +G +K+ADFG ++ + T ++ AP+V++ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 248 HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHI-GTTKS--------------- 289
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 290 ---HPPIP-----EHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+ P+P + L D L K L+ +P R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 40 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 90
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 91 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 269
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 270 KRLMAECLKKK 280
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + ++ A+ K I
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEI---LDEAYVMAS 107
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 108 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 283
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 284 MIMVKCWMIDADSRPKFRELI 304
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 91
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 271 KRLMAECLKKK 281
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G +G VY N + GE A+K++ + T IR H
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTT--IREISILKEL----KHS 60
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVI-RMYTKQLLLGLEYLHKN 188
NIV+ L ++ E + + LL ESV + + QLL G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT-G 247
++HRD+K N+L++ +G +K+ADFG ++ + T ++ AP+V++ +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 248 HSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHI-GTTKS--------------- 289
+S + DIWSVGC EM G P P + ++ +F I GT S
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 290 ---HPPIP-----EHLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+ P+P + L D L K L+ +P R TA + L+H +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 77
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 78 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 253
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 79
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 80 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVI
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 248 ---HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+SF +D+++ G + E+ TG+ P+S + +G P + + S
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 259 KRLMAECLKKK 269
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K +G G FG V+ + +G+ +A+K+VL+ EK I
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM-----ENEKEGFPI-TALREIKILQ 72
Query: 125 XXTHPNIVRYLGTARED--------DSLNILLEFVP---GGSISSLLGKFGSFPESVIRM 173
H N+V + R S+ ++ +F G +S++L KF S I+
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK--KVVELATINGAKSM 231
+ LL GL Y+H+N I+HRD+K AN+L+ G +KLADFG ++ + + + N +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 232 KGTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
T ++ PE++L + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKFGS 165
+ H NI+ LG +D L +++E+ G++ L G S
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXS 143
Query: 166 F-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
+ PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 67
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L KF S+I +Y QL L
Sbjct: 68 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALA 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 240
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 24/292 (8%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKPPWSQ 273
++ + + + + WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 274 QFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 77
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 78 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 253
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 10/259 (3%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++ +++G GAFG VY G+ + GE + + + N + K
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEF---MDEALIMASM 74
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
HP++VR LG ++ ++ + +P G + + + + ++ + Q+ G+ YL
Sbjct: 75 DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+ ++HRD+ N+LV + +K+ DFG ++ + A K WMA E I
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 246 TGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ +D+WS G T+ E+ T GKP +E+ L G PPI +++
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI---CTIDVYM 250
Query: 304 FLLKCLQKEPYLRSTASEL 322
++KC + R EL
Sbjct: 251 VMVKCWMIDADSRPKFKEL 269
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 75
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 76 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 74
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 75 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 250
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 76
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 77 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 74
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 75 VDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 250
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 68
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 248 KRLMAECLKKK 258
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 75
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 76 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 22/266 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
R G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEAL 443
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLL 179
HP+IV+ +G E+ + I++E G + S L KF S+I +Y QL
Sbjct: 444 TMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLS 501
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
L YL +HRDI N+LV + C+KL DFG S + +E +T A K WMA
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMA 560
Query: 240 PEVILQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEH 296
PE I + ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPN 616
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 10/259 (3%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
++ +++G GAFG VY G+ + GE + + + N + K
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEF---MDEALIMASM 97
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
HP++VR LG ++ ++ + +P G + + + + ++ + Q+ G+ YL
Sbjct: 98 DHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+ ++HRD+ N+LV + +K+ DFG ++ + A K WMA E I
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 246 TGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ +D+WS G T+ E+ T GKP +E+ L G PPI +++
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI---CTIDVYM 273
Query: 304 FLLKCLQKEPYLRSTASEL 322
++KC + R EL
Sbjct: 274 VMVKCWMIDADSRPKFKEL 292
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 48/296 (16%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT-- 127
+++G GA RV +NL + + AVK + EK HIR
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII---------EKQPGHIRSRVFREVEMLYQCQG 69
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
H N++ + E+D ++ E + GGSI S + K F E + + + L++LH
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 188 NGIMHRDIKGANILVDNKGC---IKLADFGASKKVVELATINGAKSMKGTP--------- 235
GI HRD+K NIL ++ +K+ DF + +NG S TP
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI----KLNGDCSPISTPELLTPCGSA 185
Query: 236 YWMAPEVILQTGHSFS-----ADIWSVGCTVIEMATGKPP----------WSQQFQEVAA 280
+MAPEV+ S D+WS+G + + +G PP W + A
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 281 ---LFH-IGTTKSHPPIPE--HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTG 330
LF I K P + H+S AKD + K L ++ R +A+++LQHP+V G
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 19/250 (7%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V G +L + V +A + T+ R HPN
Sbjct: 50 VIGAGEFGEVCSG----RLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKNG 189
+V G + I++EF+ G++ + L K G F + + + G+ YL G
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVE----LATINGAKSMKGTPY-WMAPEVIL 244
+HRD+ NILV++ K++DFG S+ + + + T G K P W APE I
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK----IPVRWTAPEAIQ 221
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---RLPAPMDCPAGLH 278
Query: 303 DFLLKCLQKE 312
+L C QKE
Sbjct: 279 QLMLDCWQKE 288
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 15 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 65
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 66 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 245 KRLMAECLKKK 255
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 36 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVMAKCQH 89
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK---QLLLGLEYL 185
N+V LG + + D L ++ ++P GS+ L P M K G+ +L
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H+N +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE L+
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA-LR 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+ +DI+S G ++E+ TG P +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 68
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 248 KRLMAECLKKK 258
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 36 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVMAKCQH 89
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK---QLLLGLEYL 185
N+V LG + + D L ++ ++P GS+ L P M K G+ +L
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H+N +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE L+
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA-LR 208
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+ +DI+S G ++E+ TG P +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEH 237
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 63
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 243 KRLMAECLKKK 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCAKLTDDHVQFLIYQ 129
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 184
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 79
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
NI+ ++G + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 80 VNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
I+HRD+K NI + +K+ DFG + + + + + + G+ WMAPEVI
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 248 ---HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+SF +D+++ G + E+ TG+ P+S + +G P + + S
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 259 KRLMAECLKKK 269
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +++ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 60/317 (18%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+++ + +G GA G V + G +AVK++ + + Q H +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL------SRPFQNQTHAKRAYRELVLLK 76
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 77 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL-LY--QM 133
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKS-MKGTPYW 237
L G+++LH GI+HRD+K +NI+V + +K+ DFG ++ A+ N + T Y+
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----ASTNFMMTPYVVTRYY 189
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATGK---------PPWSQQFQEV--------AA 280
APEVIL G+ + DIWSVGC + E+ G W++ +++ AA
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 281 LF-----HIGTTKSHPPI------PEHL-----------SMEAKDFLLKCLQKEPYLRST 318
L ++ ++P I P+ + + +A+D L K L +P R +
Sbjct: 250 LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 309
Query: 319 ASELLQHPFVTGKYQDP 335
E L+HP++T Y DP
Sbjct: 310 VDEALRHPYITVWY-DP 325
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K +G G FG V+ + +G+ +A+K+VL+ EK I
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM-----ENEKEGFPI-TALREIKILQ 71
Query: 125 XXTHPNIVRYLGTARED--------DSLNILLEFVP---GGSISSLLGKFGSFPESVIRM 173
H N+V + R S+ ++ +F G +S++L KF S I+
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 128
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK--KVVELATINGAKSM 231
+ LL GL Y+H+N I+HRD+K AN+L+ G +KLADFG ++ + + + N +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 232 KGTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
T ++ PE++L + + D+W GC + EM T P
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 32/291 (10%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 82
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 83 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 167 PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 218 KVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQ 274
+ + + WMAPE I ++ +D+WS G + E+ + G P+ +
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 275 FQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+E GT P++ + E +L C EP R T SEL++H
Sbjct: 257 DEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMAGFVATRWY 184
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G +G G FG VY G + +AVK++ + ++E Q H
Sbjct: 30 GNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVMAKCQH 83
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK---QLLLGLEYL 185
N+V LG + + D L ++ ++P GS+ L P M K G+ +L
Sbjct: 84 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H+N +HRDIK ANIL+D K++DFG ++ + A + GT +MAPE L+
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA-LR 202
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+ +DI+S G ++E+ TG P +
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEH 231
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 17 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 67
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
NI+ ++G + + L I+ ++ G S+ L F + +Q G++YLH
Sbjct: 68 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 248 ---HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+SF +D+++ G + E+ TG+ P+S + +G P + + S
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 247 KRLMAECLKKK 257
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K +G G FG V+ + +G+ +A+K+VL+ EK I
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM-----ENEKEGFPI-TALREIKILQ 72
Query: 125 XXTHPNIVRYLGTAREDDS--------LNILLEFVP---GGSISSLLGKFGSFPESVIRM 173
H N+V + R S + ++ +F G +S++L KF S I+
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK--KVVELATINGAKSM 231
+ LL GL Y+H+N I+HRD+K AN+L+ G +KLADFG ++ + + + N +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 232 KGTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
T ++ PE++L + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 194
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 24/296 (8%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVL-IAANSASKEKTQAHIRXXXXXXXXXXX 125
RK +++G G FG V+ G+ + GE + + + + + + ++ QA
Sbjct: 34 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA----VTDHMLAIGS 89
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
H +IVR LG SL ++ +++P GS+ + + G+ ++ + Q+ G+ Y
Sbjct: 90 LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAK---SMKGTPY-WMAP 240
L ++G++HR++ N+L+ + +++ADFG V +L + + S TP WMA
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFG----VADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 241 EVILQTGHSFSADIWSVGCTVIEMAT-GKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLS 298
E I ++ +D+WS G TV E+ T G P++ + EV L G + P I +
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI---CT 261
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPG 354
++ ++KC + +R T EL T +DP P + ESG IA PG
Sbjct: 262 IDVYMVMVKCWMIDENIRPTFKELANE--FTRMARDP-PRYLVIKRESGPGIA-PG 313
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 75
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 76 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ KC + R EL+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 67
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L KF S+I +Y QL L
Sbjct: 68 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALA 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV C+KL DFG S + +E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 240
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 67
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 68 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 240
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 93
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 152
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 207
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G+FG VY G G++ AVK + + A T ++ H
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH 63
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
NI+ ++G + L I+ ++ G S+ L + E + + +Q G++YLH
Sbjct: 64 VNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL--- 244
I+HRD+K NI + +K+ DFG + + + + + G+ WMAPEVI
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLS---MEA 301
+ +SF +D+++ G + E+ TG+ P+S +F +G P + + S
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 302 KDFLLKCLQKE 312
K + +CL+K+
Sbjct: 243 KRLMAECLKKK 253
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 208
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
++ K +G G FG V+ + +G+ +A+K+VL+ EK I
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM-----ENEKEGFPI-TALREIKILQ 72
Query: 125 XXTHPNIVRYLGTARED--------DSLNILLEFVP---GGSISSLLGKFGSFPESVIRM 173
H N+V + R S+ ++ +F G +S++L KF S I+
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL---SEIKR 129
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK--KVVELATINGAKSM 231
+ LL GL Y+H+N I+HRD+K AN+L+ G +KLADFG ++ + + + N +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 232 KGTPYWMAPEVIL-QTGHSFSADIWSVGCTVIEMATGKP 269
T ++ PE++L + + D+W GC + EM T P
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLLGK-------FG 164
++ H N+V LG + L +++EF G++S+ L +
Sbjct: 83 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 165 SFPESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS-- 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 256
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 257 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS-- 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 255 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 115/266 (43%), Gaps = 22/266 (8%)
Query: 65 RWRKGELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXX 121
R G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-------FLQEAL 443
Query: 122 XXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLL 179
HP+IV+ +G E+ + I++E G + S L KF S+I +Y QL
Sbjct: 444 TMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLS 501
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
L YL +HRDI N+LV C+KL DFG S + +E +T A K WMA
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMA 560
Query: 240 PEVILQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEH 296
PE I + ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPN 616
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMXGXVATRWY 208
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 184
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 98
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 99 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 274
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 275 MIMVKCWMIDADSRPKFRELI 295
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G G FG+V M + + + V +A + T+
Sbjct: 70 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 129
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 249
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 250 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 306 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 357
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 31 PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 84
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 143
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 198
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+++ + +G GA G V + G +AVK++ + + Q H +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL------SRPFQNQTHAKRAYRELVLLK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKS-MKGTPYW 237
L G+++LH GI+HRD+K +NI+V + +K+ DFG ++ A N + T Y+
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----ACTNFMMTPYVVTRYY 191
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEMATG---------KPPWSQQFQEV--------AA 280
APEVIL G++ + DIWSVGC + E+ G W++ +++ AA
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 281 LF-----HIGTTKSHPPI------PEHL-----------SMEAKDFLLKCLQKEPYLRST 318
L ++ +P I P+ + + +A+D L K L +P R +
Sbjct: 252 LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 311
Query: 319 ASELLQHPFVTGKYQDP 335
E L+HP++T Y DP
Sbjct: 312 VDEALRHPYITVWY-DP 327
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G G FG+V M + + + V +A + T+
Sbjct: 16 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 75
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 195
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 196 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 252 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 303
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 80
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 81 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWY 195
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G G FG+V M + + + V +A + T+
Sbjct: 13 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 72
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 192
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 193 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 249 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 300
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH-----TDDEMTGYVATRWY 190
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 75
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 76 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 70
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 71 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 128
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 243
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 244 LYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 69
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 70 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 127
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 242
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 243 LYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 80
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 81 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 79
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 80 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 255
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 256 MIMVKCWMIDADSRPKFRELI 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 76
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 77 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWY 195
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G G FG+V M + + + V +A + T+
Sbjct: 11 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 70
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++E+ G++ L
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL 190
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 191 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 247 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 298
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWY 195
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 76
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 77 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 95
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 96 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 153
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 268
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 269 LYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 24/296 (8%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVL-IAANSASKEKTQAHIRXXXXXXXXXXX 125
RK +++G G FG V+ G+ + GE + + + + + + ++ QA
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA----VTDHMLAIGS 71
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
H +IVR LG SL ++ +++P GS+ + + G+ ++ + Q+ G+ Y
Sbjct: 72 LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAK---SMKGTPY-WMAP 240
L ++G++HR++ N+L+ + +++ADFG V +L + + S TP WMA
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFG----VADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 241 EVILQTGHSFSADIWSVGCTVIEMAT-GKPPWS-QQFQEVAALFHIGTTKSHPPIPEHLS 298
E I ++ +D+WS G TV E+ T G P++ + EV L G + P I +
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI---CT 243
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFRNSVMESGNQIATPG 354
++ ++KC + +R T EL T +DP P + ESG IA PG
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKELANE--FTRMARDP-PRYLVIKRESGPGIA-PG 295
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KXQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH-----TDDEMTGYVATRWY 194
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 64
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 65 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 122
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 237
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTEL 259
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 118 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS-- 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 292 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS-- 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 255 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 22/291 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V N + E A+K + ++ + + H R +
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKX--LQDCPKARREVELHWRASQCPHIVRIVDVYE 125
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLEYLHK 187
N+ Y G L I+ E + GG + S + G +F E K + ++YLH
Sbjct: 126 NL--YAGRK----CLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS 179
Query: 188 NGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
I HRD+K N+L +K +KL DFG +K E + N + TPY++APEV+
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAA---LFHIGTTKSHPPIPE--HLSM 299
+ S D WS+G + G PP+ + I + P PE +S
Sbjct: 237 PEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSE 296
Query: 300 EAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPH-PVFRNSVMESGNQ 349
E K + L+ EP R T +E HP++ + P P+ + V++ +
Sbjct: 297 EVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKE 347
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS-- 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 255 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 67
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 68 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 240
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 137/342 (40%), Gaps = 88/342 (25%)
Query: 66 WRKGELV----------GCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRX 115
W+KG L+ G G FGRV + ++D+ + AVK V + K A I
Sbjct: 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV----RNIKKYTRSAKIEA 82
Query: 116 XXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK--FGSFPESVIRM 173
+ NIV+Y G D + ++ E + G S+ ++ + + F I++
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKL 141
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDN----KGCIKLADFGASKKV---------V 220
Y ++L L YL K + H D+K NIL+D+ K I + KK+ +
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 221 ELATINGAK-------SMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
+L A S+ T + APEVIL G S+D+WS GC + E+ TG S
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG----SL 257
Query: 274 QFQEVAALFHIGTTKS-HPPIPEHLSMEAK------------------------------ 302
F+ + H+ +S PIP+++ EA
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 303 ----------------DFLLKCLQKEPYLRSTASELLQHPFV 328
DFL LQ +P LR + +ELL+H F+
Sbjct: 318 KKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
W +++G GA V+ G + +G+L A+K + N + +R
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQMREFEVLKKL--- 64
Query: 126 XTHPNIVRYLGTAREDDSLN--ILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLL 179
H NIV+ E + + +++EF P GS+ ++L +G PES + + ++
Sbjct: 65 -NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVV 122
Query: 180 LGLEYLHKNGIMHRDIKGANILV----DNKGCIKLADFGASKKVVELATINGAKSMKGTP 235
G+ +L +NGI+HR+IK NI+ D + KL DFGA++ EL + GT
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFVXLYGTE 179
Query: 236 YWMAPEV----ILQTGHS----FSADIWSVGCTVIEMATGKPPW 271
++ P++ +L+ H + D+WS+G T ATG P+
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KXQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVY----MGMN-LDSGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V G++ + +AVK + A + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPW--S 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 246 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+ G + ++A+K LI +S + + + HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS-LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 132 VRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG- 189
V+ G + +++EFVP G + LL K SV + LG+EY+
Sbjct: 86 VKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 190 -IMHRDIKGANILVDNKG-----CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I+HRD++ NI + + C K+ADFG S++ +++ + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 244 LQTGHSFS--ADIWSVGCTVIEMATGKPPWSQ-QFQEVAALFHIGTTKSHPPIPEHLSME 300
S++ AD +S + + TG+ P+ + + ++ + I P IPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
++ + C +P R S +++
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 22/262 (8%)
Query: 69 GELVGCGAFGRVYMGMNL---DSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
G +G G FG V+ G+ + + +A+K + + +EK
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-------FLQEALTMRQ 72
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYTKQLLLGLE 183
HP+IV+ +G E+ + I++E G + S L K+ S+I +Y QL L
Sbjct: 73 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALA 130
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
YL +HRDI N+LV + C+KL DFG S + +E +T A K WMAPE I
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 244 LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKS--HPPIPEHLSME 300
+ ++D+W G + E + G P FQ V IG ++ P+P +
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMPPNCPPT 245
Query: 301 AKDFLLKCLQKEPYLRSTASEL 322
+ KC +P R +EL
Sbjct: 246 LYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH-----TDDEMTGYVATRWY 193
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSL----LGKFGSFPESVIRMYTKQLLLGLEY 184
P ++ + ++LE+ GG I SL L + S VIR+ KQ+L G+ Y
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS-ENDVIRL-IKQILEGVYY 146
Query: 185 LHKNGIMHRDIKGANILVDN---KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPE 241
LH+N I+H D+K NIL+ + G IK+ DFG S+K+ + + + GTP ++APE
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---REIMGTPEYLAPE 203
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
++ + + D+W++G + T P+ + QE +S
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 301 AKDFLLKCLQKEPYLRSTASELLQHPFV 328
A DF+ L K P R TA L H ++
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 190
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 81
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 140
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 195
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 193
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 20 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 73
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 132
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 187
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
L+G G FG+VY G+ D + +A + E +Q I HP+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK--------VALKRRTPESSQG-IEEFETEIETLSFCRHPH 96
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL------GLEY 184
+V +G E + + ++ +++ G++ L +GS ++ + ++L + GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
LH I+HRD+K NIL+D K+ DFG SKK EL + +KGT ++ PE +
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF 275
+ + +D++S G + E+ + Q
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 67
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 68 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 243
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 244 MIMVKCWMIDADSRPKFRELI 264
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SKPFQSIIHAKRTYRELRL 86
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 200
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 86
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 200
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 86
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 145
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 200
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 97
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 156
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMXGYVATRWY 211
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG V G G+ K+ +A + T+ R HP
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGK----KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 75
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRM--YTKQLLLGLE 183
NI+R G + IL EF+ G++ S L G+F +VI++ + + G+
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----TVIQLVGMLRGIASGMR 130
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA---TINGAKSMKGTPYWMAP 240
YL + +HRD+ NILV++ K++DFG S+ + E + T + K W AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 241 EVILQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLS 298
E I + ++D WS G + E M+ G +P W Q+V + I PP P+
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV--INAIEQDYRLPPPPD-CP 247
Query: 299 MEAKDFLLKCLQKE-------PYLRSTASELLQHP 326
+L C QK+ P + S +++++P
Sbjct: 248 TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNP 282
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 194
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 85
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 144
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH-----TDDEMTGYVATRWY 199
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG V G G+ K+ +A + T+ R HP
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGK----KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 77
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRM--YTKQLLLGLE 183
NI+R G + IL EF+ G++ S L G+F +VI++ + + G+
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----TVIQLVGMLRGIASGMR 132
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV-------VELATINGAKSMKGTPY 236
YL + +HRD+ NILV++ K++DFG S+ + E +++ G ++
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR---- 188
Query: 237 WMAPEVILQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIP 294
W APE I + ++D WS G + E M+ G +P W Q+V + I PP P
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV--INAIEQDYRLPPPP 246
Query: 295 EHLSMEAKDFLLKCLQKE-------PYLRSTASELLQHP 326
+ +L C QK+ P + S +++++P
Sbjct: 247 D-CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNP 284
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 190
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 70
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 71 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 246
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 247 MIMVKCWMIDADSRPKFRELI 267
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 76
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 135
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 190
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 80
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 139
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 194
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 81
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L +++EF G++S+ L K F
Sbjct: 82 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 167 -PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGAS 216
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG +
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 217 KKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--Q 273
+ + + + WMAPE I ++ +D+WS G + E+ + G P+ +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+E GT P++ + E +L C EP R T SEL++H
Sbjct: 256 IDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+ G + ++A+K LI +S + + + HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS-LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 132 VRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG- 189
V+ G + +++EFVP G + LL K SV + LG+EY+
Sbjct: 86 VKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 190 -IMHRDIKGANILVDNKG-----CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I+HRD++ NI + + C K+ADFG S++ +++ + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 244 LQTGHSFS--ADIWSVGCTVIEMATGKPPWSQ-QFQEVAALFHIGTTKSHPPIPEHLSME 300
S++ AD +S + + TG+ P+ + + ++ + I P IPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
++ + C +P R S +++
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGXVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 94
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 153
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 208
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 93
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 152
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 207
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 193
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++ + G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 75
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 76 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 251
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ KC + R EL+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 97
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 156
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 211
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 71
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 130
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 185
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KSQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG + T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 71
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 130
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 185
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 85
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 144
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 199
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 116
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 173
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 226
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 347 RISVDDALQHPYINVWY-DPAEV 368
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVY----MGMN-LDSGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V G++ + +AVK + A + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L ++ EF G++S+ L K F
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPW--S 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 246 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ +G GA+G V + +G +AVK++ + ++ H +
Sbjct: 26 PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 79
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 138
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH-----TDDEMTGYVATRWY 193
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 70
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 129
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 184
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++ GAFG VY G+ + GE + + + A+ K I
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 80
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++++ +P G + + + + + + Q+ G+ Y
Sbjct: 81 VDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
L+G G FG+VY G+ D + +A + E +Q I HP+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK--------VALKRRTPESSQG-IEEFETEIETLSFCRHPH 96
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL------GLEY 184
+V +G E + + ++ +++ G++ L +GS ++ + ++L + GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
LH I+HRD+K NIL+D K+ DFG SKK EL + +KGT ++ PE +
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF 275
+ + +D++S G + E+ + Q
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 19 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 72
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 131
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DFG ++ T + T ++
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMTGYVATRWY 186
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I++EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 246
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 247 RACWQWNPSDRPSFAEIHQ 265
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 76
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 77 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 252
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ KC + R EL+
Sbjct: 253 MIMRKCWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 83
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 84 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 259
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ KC + R EL+
Sbjct: 260 MIMRKCWMIDADSRPKFRELI 280
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S +V+E A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLS-RVLE-DDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I++EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 65
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 66 VQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVER 122
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 237
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +KEP R T L F+ + P ++
Sbjct: 238 MCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQ 271
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L ++ EF G++S+ L K F
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPW--S 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 246 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 22 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 136
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 251
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 252 QLMLDCWQKD 261
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
++W GE GAFG+V++ + LL + ++ A A KE +++ +
Sbjct: 45 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 124 XXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKFGSFPESV------- 170
H +IVR+ G E L ++ E++ G ++ L K + E V
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 171 --IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN-G 227
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 228 AKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGT 286
++M WM PE IL + +D+WS G + E+ T GK PW Q A+ I T
Sbjct: 218 GRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCI-T 274
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVF 339
P E + C Q+EP R + ++ H + Q P PV+
Sbjct: 275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALAQAP-PVY 324
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 33/274 (12%)
Query: 70 ELVGCGAFGR-VYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
+++G GA G VY GM D+ ++ AVK++L S + + Q H
Sbjct: 30 DVLGHGAEGTIVYRGM-FDNRDV-AVKRILPECFSFADREVQL----------LRESDEH 77
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSL----LGKFGSFPESVIRMYTKQLLLGLEY 184
PN++RY T ++ I +E + G P ++++ T GL +
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTS----GLAH 133
Query: 185 LHKNGIMHRDIKGANILV---DNKGCIK--LADFGASKKV-VELATINGAKSMKGTPYWM 238
LH I+HRD+K NIL+ + G IK ++DFG KK+ V + + + GT W+
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 239 APEVI---LQTGHSFSADIWSVGCTVIE-MATGKPPWSQQFQEVAALFHIGTTKSHPPIP 294
APE++ + +++ DI+S GC ++ G P+ + Q A + +G P
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSLDCLHP 252
Query: 295 E-HLSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
E H + A++ + K + +P R +A +L+HPF
Sbjct: 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 39 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 153
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 268
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 269 QLMLDCWQKD 278
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 68
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 69 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYVER 125
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 240
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +KEP R T L F+ + P ++
Sbjct: 241 MCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQ 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V + Q+ G+ Y+ +
Sbjct: 73 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM--SAQIASGMAYVER 129
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 244
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +KEP R T L F+ + P ++
Sbjct: 245 MCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQ 278
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I++EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 32/296 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAH 112
LP K + P + G+ +G GAFG+V M + + + V +A + T+
Sbjct: 24 LPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD 83
Query: 113 IRXXXXXXXXXXXX-THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---------- 161
+ H NI+ LG +D L +++ + G++ L
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS 143
Query: 162 -KFGSFPESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + T QL G+EYL +HRD+ N+LV +K+ADFG
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 216 SKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--GKP 269
++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G P
Sbjct: 204 ARDINNIDYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 270 PWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+E+ L G P L M +D C P R T +L++
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R + G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL-GKFGSF---- 166
++ H N+V LG + L ++ EF G++S+ L K F
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 167 --PESVIR---------MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGA 215
PE + + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 216 SKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPW--S 272
++ + + + WMAPE I ++ +D+WS G + E+ + G P+
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 273 QQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
+ +E GT P++ + E +L C EP R T SEL++H
Sbjct: 246 KIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 49 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 163
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S +V+E A + +G W +PE I
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLS-RVLE-DDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAALY 278
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 279 QLMLDCWQKD 288
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 241
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYVER 298
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----HDL 413
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +KEP R T E LQ F+ + P ++
Sbjct: 414 MCQCWRKEPEERPTF-EYLQ-AFLEDYFTSTEPQYQ 447
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 275 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 324
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ ++ M Q+ G+ Y+ +
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVER 381
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----HDL 496
Query: 305 LLKCLQKEPYLRSTASELLQ 324
+ +C +KEP R T E LQ
Sbjct: 497 MCQCWRKEPEERPTF-EYLQ 515
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V + Q+ G+ Y+ +
Sbjct: 73 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIASGMAYVER 129
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 244
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +KEP R T L F+ + P ++
Sbjct: 245 MCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQ 278
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 132/320 (41%), Gaps = 66/320 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKYQDP 335
R + + LQHP++ Y DP
Sbjct: 309 RISVDDALQHPYINVWY-DP 327
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 12/261 (4%)
Query: 68 KGELVGCGAFGRVYMGM-NLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
+ +++G G FG VY GM SG+ K+V +A + T+
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGK----KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSFPESVIRMYTKQLLLGLEYL 185
+H NI+R G + + I+ E++ G++ L K G F + + + G++YL
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEVIL 244
+HRD+ NILV++ K++DFG S+ + + S P W APE I
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E+ T +P W EV + G P P
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF---RLPTPMDCPSAIY 280
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+++C Q+E R ++++
Sbjct: 281 QLMMQCWQQERARRPKFADIV 301
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 309 RISVDDALQHPYINVWY-DPAEV 330
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 133/323 (41%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 309 RISVDDALQHPYINVWY-DPAEV 330
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
++W GE GAFG+V++ + LL + ++ A A KE +++ +
Sbjct: 16 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 124 XXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKFGSFPESV------- 170
H +IVR+ G E L ++ E++ G ++ L K + E V
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 171 --IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN-G 227
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 129 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 228 AKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGT 286
++M WM PE IL + +D+WS G + E+ T GK PW Q A+ I T
Sbjct: 189 GRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCI-T 245
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVF 339
P E + C Q+EP R + ++ H + Q P PV+
Sbjct: 246 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALAQAP-PVY 295
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 77
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 134
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 187
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 188 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 247
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 248 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 307
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 308 RISVDDALQHPYINVWY-DPAEV 329
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 13/249 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G FG V G +L +++ +A + T+ R HP
Sbjct: 39 QVIGAGEFGEVCSG----HLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 94
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKN 188
N++ G + + I+ EF+ GS+ S L + G F + + + G++YL
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELA---TINGAKSMKGTPYWMAPEVILQ 245
+HRD+ NILV++ K++DFG S+ + + T A K W APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 246 TGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ ++D+WS G + E M+ G +P W Q+V + I PP P
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV--INAIEQDYRLPP-PMDCPSALHQ 271
Query: 304 FLLKCLQKE 312
+L C QK+
Sbjct: 272 LMLDCWQKD 280
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 116
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 173
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 226
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 347 RISVDDALQHPYINVWY-DPAEV 368
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I++EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 251 RACWQWNPSDRPSFAEIHQ 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
RK +++G GAFG VY G+ + GE + + + + K I
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI---LDEAYVMAGV 76
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGL 182
P + R LG ++ ++ + +P G + + G+ GS + + Q+ G+
Sbjct: 77 GSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGS---QDLLNWCMQIAKGM 132
Query: 183 EYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
YL ++HRD+ N+LV + +K+ DFG ++ + T A K WMA E
Sbjct: 133 SYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSME 300
IL+ + +D+WS G TV E+ T KP +E+ L G PPI +++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPI---CTID 249
Query: 301 AKDFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 VYMIMVKCWMIDSECRPRFRELV 272
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 79
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 136
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 189
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 249
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 310 RISVDDALQHPYINVWY-DPAEV 331
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
++W GE GAFG+V++ + LL + ++ A A KE +++ +
Sbjct: 22 LKWELGE----GAFGKVFLA---ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 124 XXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKFGSFPESV------- 170
H +IVR+ G E L ++ E++ G ++ L K + E V
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 171 --IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATIN-G 227
+ Q+ G+ YL +HRD+ N LV +K+ DFG S+ + G
Sbjct: 135 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 228 AKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGT 286
++M WM PE IL + +D+WS G + E+ T GK PW Q A+ I T
Sbjct: 195 GRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCI-T 251
Query: 287 TKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVF 339
P E + C Q+EP R + ++ H + Q P PV+
Sbjct: 252 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQALAQAP-PVY 301
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 241
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYVER 298
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----HDL 413
Query: 305 LLKCLQKEPYLRSTASEL 322
+ +C +KEP R T L
Sbjct: 414 MCQCWRKEPEERPTFEYL 431
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I++E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 309 RISVDDALQHPYINVWY-DPAEV 330
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 309 RISVDDALQHPYINVWY-DPAEV 330
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 79
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 136
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 189
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 249
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 310 RISVDDALQHPYINVWY-DPAEV 331
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ D+G ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L+G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KP 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++G GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ KC + R EL+
Sbjct: 250 MIMRKCWMIDADSRPKFRELI 270
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 23/269 (8%)
Query: 69 GELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
G+++G G FG V G + + G L V + +++S Q I +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS----QREIEEFLSEAACMKDFS 94
Query: 128 HPNIVRYLGTAREDDSLNI-----LLEFVPGGSISSLL--GKFGSFPESV----IRMYTK 176
HPN++R LG E S I +L F+ G + + L + + P+ + + +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY 236
+ LG+EYL +HRD+ N ++ + + +ADFG SKK+ + K
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 237 WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPI 293
W+A E + ++ +D+W+ G T+ E+AT G P+ Q + L H K
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ---- 270
Query: 294 PEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
PE E + + C + +P R T S L
Sbjct: 271 PEDCLDELYEIMYSCWRTDPLDRPTFSVL 299
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 30/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V + +G+ A+K L+ + ++++ H + P
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALK--LLYDSPKARQEVDHHWQASGG----------P 63
Query: 130 NIVRYLGTARE----DDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IV L L I++E + GG + S + + G +F E + + ++
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
+LH + I HRD+K N+L +K +KL DFG +K+ T N ++ TPY++AP
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE----TTQNALQTPCYTPYYVAP 179
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALF--HIGTTKSHPPIPE-- 295
EV+ + S D+WS+G + + G PP +S Q ++ I + P PE
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 239
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+S +AK + L+ +P R T ++ + HP++
Sbjct: 240 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I++E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 71
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL-LY--QM 128
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 181
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 302 RISVDDALQHPYINVWY-DPAEV 323
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 30/273 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G+V + +G+ A+K L+ + ++++ H + P
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALK--LLYDSPKARQEVDHHWQASGG----------P 82
Query: 130 NIVRYLGTARE----DDSLNILLEFVPGGSISSLLGKFG--SFPESVIRMYTKQLLLGLE 183
+IV L L I++E + GG + S + + G +F E + + ++
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 184 YLHKNGIMHRDIKGANILVDNK---GCIKLADFGASKKVVELATINGAKSMKGTPYWMAP 240
+LH + I HRD+K N+L +K +KL DFG +K+ T N ++ TPY++AP
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE----TTQNALQTPCYTPYYVAP 198
Query: 241 EVILQTGHSFSADIWSVGCTVIEMATGKPP-WSQQFQEVAALF--HIGTTKSHPPIPE-- 295
EV+ + S D+WS+G + + G PP +S Q ++ I + P PE
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 258
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+S +AK + L+ +P R T ++ + HP++
Sbjct: 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++ GAFG VY G+ + GE + + + A+ K I
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 73
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 74 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 249
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXX 125
++K +++ GAFG VY G+ + GE + + + A+ K I
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI---LDEAYVMAS 80
Query: 126 XTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
+P++ R LG ++ ++ + +P G + + + + + + Q+ G+ Y
Sbjct: 81 VDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
L ++HRD+ N+LV +K+ DFG +K + A+ K WMA E IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 245 QTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
++ +D+WS G TV E+ T KP E++++ G PPI +++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI---CTIDVY 256
Query: 303 DFLLKCLQKEPYLRSTASELL 323
++KC + R EL+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 136
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 251 RACWQWNPSDRPSFAEIHQ 269
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 72
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 129
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 182
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 242
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 303 RISVDDALQHPYINVWY-DPAEV 324
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 69
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I++EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
S +D+W+ G + E+AT G P+ SQ ++ + + + PE +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEK 238
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
+ + C Q P R + +E+ Q
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ +G GA+G V + V +V +A S + Q + +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYD-------NVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 125 XXTHPNIVRYLGTAR----EDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLL 180
H NI+ R E L+ + G + LL K I + Q+L
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AKSMKGTPYWMA 239
GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G T ++ A
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 240 PEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTKSHPPIPEH 296
PE++L + G++ S DIWSVGC + EM + +P P ++ + I + S +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 297 LSMEAKDFLL--------------------------KCLQKEPYLRSTASELLQHPFVTG 330
++++A+++LL K L P+ R + L HP++
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE- 334
Query: 331 KYQDP 335
+Y DP
Sbjct: 335 QYYDP 339
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 71
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 128
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 181
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 302 RISVDDALQHPYINVWY-DPAEV 323
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG VY G+ +AVK + KE T + HPN+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 69
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
S +D+W+ G + E+AT G P+ SQ ++ + + + PE +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEK 238
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
+ + C Q P R + +E+ Q
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 31/264 (11%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + A S +A + +HP +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEV---------MMKLSHPKL 64
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+S +D+WS G + E+ + GK P+ S+ ++++ F + P S
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------PRLASTHV 233
Query: 302 KDFLLKCLQKEPYLRSTASELLQH 325
+ C ++ P R S LL+
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 72
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 129
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYVVT 182
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 242
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 316 RSTASELLQHPFVTGKYQDPHPV 338
R + + LQHP++ Y DP V
Sbjct: 303 RISVDDALQHPYINVWY-DPAEV 324
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 251 RACWQWNPSDRPSFAEIHQ 269
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ DF ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 65/317 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLG------TAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L T E + +++E + + + S + +Y Q+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL-LY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------PPW 271
Y+ APEVIL G+ + DIWSVGC + EM K P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 272 SQQFQEVAALF------HIGTT-------KSHPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + + G T P EH + +A+D L K L +P
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 316 RSTASELLQHPFVTGKY 332
R + + LQHP++ Y
Sbjct: 309 RISVDDALQHPYINVWY 325
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG ++ + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 251 RACWQWNPSDRPSFAEIHQ 269
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 66
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 67 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 238
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 239 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 272
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 76
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 77 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
SF PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 135 FSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 195 GLARDIHHIDXXKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 304
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 30/289 (10%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVY----MGMN-LDSGELLAVKQVLIAANSASKEKTQAH 112
K + P R G+ +G GAFG+V G++ + +AVK + A + +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGTA-REDDSLNILLEFVPGGSISSLL----GKFGSFP 167
++ H N+V LG + L +++EF G++S+ L +F +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 168 ESV--------IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV 219
+ + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ +
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 220 VELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQFQ 276
+ + WMAPE I ++ +D+WS G + E+ + G P+ + +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 277 EVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
E GT P++ + E +L C EP R T SEL++H
Sbjct: 255 EFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + A S +A + +HP +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEV---------MMKLSHPKL 62
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 235
Query: 306 LKCLQKEPYLRSTASELLQH 325
C ++ P R S LL+
Sbjct: 236 NHCWKERPEDRPAFSRLLRQ 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 57 EKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXX 116
++ DA I+ K ++G G FG V G G+ +++ +A + T R
Sbjct: 9 KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGK----REICVAIKTLKAGYTDKQRRDF 62
Query: 117 XXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYT 175
HPNI+ G + + I+ E++ GS+ + L K G F +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 176 KQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP 235
+ + G++YL +HRD+ NILV++ K++DFG S +V+E A + +G
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-RVLE-DDPEAAYTTRGGK 180
Query: 236 Y---WMAPEVILQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSH 290
W APE I + ++D+WS G + E M+ G +P W Q+V G
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---R 237
Query: 291 PPIPEHLSMEAKDFLLKCLQKE 312
P P + +L C QKE
Sbjct: 238 LPPPMDCPIALHQLMLDCWQKE 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + A S +A + +HP +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEV---------MMKLSHPKL 67
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 240
Query: 306 LKCLQKEPYLRSTASELLQH 325
C ++ P R S LL+
Sbjct: 241 NHCWRERPEDRPAFSRLLRQ 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 64
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 65 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 121
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 236
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 237 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + A S +A + +HP +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEV---------MMKLSHPKL 64
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 237
Query: 306 LKCLQKEPYLRSTASELLQH 325
C ++ P R S LL+
Sbjct: 238 NHCWKERPEDRPAFSRLLRQ 257
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 135
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 249
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 250 RACWQWNPSDRPSFAEIHQ 268
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 241
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 242 VQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQIASGMAYVER 298
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----HDL 413
Query: 305 LLKCLQKEPYLRSTASEL 322
+ +C +KEP R T L
Sbjct: 414 MCQCWRKEPEERPTFEYL 431
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 57 EKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXX 116
++ DA I+ K ++G G FG V G G+ +++ +A + T R
Sbjct: 3 KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGK----REICVAIKTLKAGYTDKQRRDF 56
Query: 117 XXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYT 175
HPNI+ G + + I+ E++ GS+ + L K G F +
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 176 KQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP 235
+ + G++YL +HRD+ NILV++ K++DFG S +V+E A + +G
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-RVLE-DDPEAAYTTRGGK 174
Query: 236 Y---WMAPEVILQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSH 290
W APE I + ++D+WS G + E M+ G +P W Q+V G
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---R 231
Query: 291 PPIPEHLSMEAKDFLLKCLQKE 312
P P + +L C QKE
Sbjct: 232 LPPPMDCPIALHQLMLDCWQKE 253
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 84
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 144
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 258
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 259 RACWQWNPSDRPSFAEIHQ 277
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 57 EKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXX 116
++ DA I+ K ++G G FG V G G+ +++ +A + T R
Sbjct: 24 KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGK----REICVAIKTLKAGYTDKQRRDF 77
Query: 117 XXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYT 175
HPNI+ G + + I+ E++ GS+ + L K G F +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 176 KQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP 235
+ + G++YL +HRD+ NILV++ K++DFG S +V+E A + +G
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS-RVLE-DDPEAAYTTRGGK 195
Query: 236 Y---WMAPEVILQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSH 290
W APE I + ++D+WS G + E M+ G +P W Q+V G
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---R 252
Query: 291 PPIPEHLSMEAKDFLLKCLQKE 312
P P + +L C QKE
Sbjct: 253 LPPPMDCPIALHQLMLDCWQKE 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKIRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 76
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 251 RACWQWNPSDRPSFAEIHQ 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 73
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 248 RACWQWNPSDRPSFAEIHQ 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E++ GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG + + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---YRLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 30/289 (10%)
Query: 58 KTDAPPIRWRKGELVGCGAFGRVYMG--MNLD---SGELLAVKQVLIAANSASKEKTQAH 112
K + P R G+ +G GAFG+V +D + +AVK + A + +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 113 IRXXXXXXXXXXXXTHPNIVRYLGT-AREDDSLNILLEFVPGGSISSLL----GKFGSFP 167
++ H N+V LG + L +++EF G++S+ L +F +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 168 ESV--------IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV 219
+ + Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ +
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 220 VELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQFQ 276
+ + WMAPE I ++ +D+WS G + E+ + G P+ + +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 277 EVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
E GT P++ + E +L C EP R T SEL++H
Sbjct: 255 EFXRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I++E++ G + L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 73
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 248 RACWQWNPSDRPSFAEIHQ 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KP 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANSASKE 107
LP K + P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E
Sbjct: 28 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 87
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSF 166
+ ++ H NIV LG ++ E+ G + + L K SF
Sbjct: 88 ALMSELKVLSYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 141
Query: 167 PES-----------------VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIK 209
S + ++ Q+ G+ +L +HRD+ NIL+ + K
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 201
Query: 210 LADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--- 266
+ DFG ++ + + + + WMAPE I ++F +D+WS G + E+ +
Sbjct: 202 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 267 ----GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
G P S+ ++ + F + + PEH E D + C +P R T ++
Sbjct: 262 SPYPGMPVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
Query: 323 LQ 324
+Q
Sbjct: 315 VQ 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANSASKE 107
LP K + P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E
Sbjct: 12 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 71
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSF 166
+ ++ H NIV LG ++ E+ G + + L K SF
Sbjct: 72 ALMSELKVLSYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 125
Query: 167 PES-----------------VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIK 209
S + ++ Q+ G+ +L +HRD+ NIL+ + K
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 185
Query: 210 LADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--- 266
+ DFG ++ + + + + WMAPE I ++F +D+WS G + E+ +
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 267 ----GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
G P S+ ++ + F + + PEH E D + C +P R T ++
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
Query: 323 LQ 324
+Q
Sbjct: 299 VQ 300
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 128/320 (40%), Gaps = 66/320 (20%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R++ + +G GA G V + +A+K++ + + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKRAYRELVLMK 78
Query: 125 XXTHPNIVRYLGTAREDDSLN------ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQL 178
H NI+ L SL I++E + ++S ++ +Y Q+
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--QM 135
Query: 179 LLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG----T 234
L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M T
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMTPYVVT 188
Query: 235 PYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KPPW 271
Y+ APEVIL G+ + DIWSVGC + EM G P +
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 272 SQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEPYL 315
++ Q + K P EH + +A+D L K L +
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 316 RSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 309 RISVDEALQHPYINVWY-DP 327
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++G L+AVKQ L + + Q I+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQ-LQHSGPDQQRDFQREIQILKALHSDF---- 72
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
IV+Y G + SL +++E++P G + L + S + +Y+ Q+ G+EY
Sbjct: 73 ---IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
S +D+WS G + E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 22 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
NI+R G + + I+ E + GS+ S L K + +VI++ + + G++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 136
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 251
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 252 QLMLDCWQKD 261
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 71
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 246 RACWQWNPSDRPSFAEIHQ 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 246
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 247 RACWQWNPSDRPSFAEIHQ 265
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+ G + ++A+K LI +S + + + HPNI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKS-LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 132 VRYLGTAREDDSLNILLEFVPGGSI-SSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG- 189
V+ G + +++EFVP G + LL K SV + LG+EY+
Sbjct: 86 VKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 190 -IMHRDIKGANILVDNKG-----CIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI 243
I+HRD++ NI + + C K+ADF S++ +++ + G WMAPE I
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 244 LQTGHSFS--ADIWSVGCTVIEMATGKPPWSQ-QFQEVAALFHIGTTKSHPPIPEHLSME 300
S++ AD +S + + TG+ P+ + + ++ + I P IPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
++ + C +P R S +++
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 278
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HR++ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 452
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 453 RACWQWNPSDRPSFAEIHQ 471
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANSASKE 107
LP K + P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E
Sbjct: 30 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 89
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSF 166
+ ++ H NIV LG ++ E+ G + + L K SF
Sbjct: 90 ALMSELKVLSYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 143
Query: 167 PES-----------------VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIK 209
S + ++ Q+ G+ +L +HRD+ NIL+ + K
Sbjct: 144 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 203
Query: 210 LADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--- 266
+ DFG ++ + + + + WMAPE I ++F +D+WS G + E+ +
Sbjct: 204 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 267 ----GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
G P S+ ++ + F + + PEH E D + C +P R T ++
Sbjct: 264 SPYPGMPVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
Query: 323 LQ 324
+Q
Sbjct: 317 VQ 318
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E + GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 36/308 (11%)
Query: 43 GLFSKPAVPALPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIA 100
G+ + + LP + + P R G+ +G GAFG+V + + LD + V +V +
Sbjct: 48 GMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 107
Query: 101 A-NSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSL 159
S + EK + + H NI+ LG +D L +++E+ G++
Sbjct: 108 MLKSDATEKDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165
Query: 160 L------GKFGSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVD 203
L G S+ PE + Q+ G+EYL +HRD+ N+LV
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 225
Query: 204 NKGCIKLADFGASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGC 259
+K+ADFG ++ + + T NG +K WMAPE + ++ +D+WS G
Sbjct: 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGV 281
Query: 260 TVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLR 316
+ E+ T G P +E+ L G P L M +D C P R
Sbjct: 282 LLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQR 337
Query: 317 STASELLQ 324
T +L++
Sbjct: 338 PTFKQLVE 345
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 73
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + +V+ +Y Q+ +EYL K
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S +D+W+ G + E+AT G P+ +++ ++ + PE + + +
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 306 LKCLQKEPYLRSTASELLQ 324
C Q P R + +E+ Q
Sbjct: 248 RACWQWNPSDRPSFAEIHQ 266
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++G L+AVKQ L + + Q I+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQ-LQHSGPDQQRDFQREIQILKALHSDF---- 73
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
IV+Y G + SL +++E++P G + L + S + +Y+ Q+ G+EY
Sbjct: 74 ---IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
S +D+WS G + E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E+VG GAFG V + +A+KQ+ S+ + +A I HP
Sbjct: 15 EVVGRGAFGVVCKAKW--RAKDVAIKQI------ESESERKAFI----VELRQLSRVNHP 62
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM---YTKQLLLGLEYLH 186
NIV+ G + + +++E+ GGS+ ++L P + Q G+ YLH
Sbjct: 63 NIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 187 K---NGIMHRDIKGANILVDNKGCI-KLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
++HRD+K N+L+ G + K+ DFG + + T N KG+ WMAPEV
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEV 175
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQ----QFQEVAALFHIGTTKSHPPIPEHLS 298
+ +S D++S G + E+ T + P+ + F+ + A+ H GT PP+ ++L
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGT---RPPLIKNLP 231
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQ 324
+ + +C K+P R + E+++
Sbjct: 232 KPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 6 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 65
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 66 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 123
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
S+ PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 183
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 184 GLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 240 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 293
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++VG G FG V G +L + K++ +A + T+ R HP
Sbjct: 51 KVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM--YTKQLLLGLEYLHK 187
NI+R G + + I+ E + GS+ S L K + +VI++ + + G++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVIL 244
G +HRD+ NIL+++ K++DFG S+ + + A + +G W +PE I
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 245 QTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ ++D+WS G + E M+ G +P W Q+V G P P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPPPMDCPAALY 280
Query: 303 DFLLKCLQKE 312
+L C QK+
Sbjct: 281 QLMLDCWQKD 290
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG V G +L +++ +A + T+ R HPN
Sbjct: 29 VIGAGEFGEVCSG----RLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 84
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKNG 189
I+ G + + I+ E++ GS+ + L K G F + + + G++YL G
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ NIL+++ K++DFG S+ + + A + +G W APE I
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 247 GHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDF 304
+ ++D+WS G + E+ + +P W Q+V G P P
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY---RLPSPMDCPAALYQL 259
Query: 305 LLKCLQKEPYLRSTASELL 323
+L C QKE R E++
Sbjct: 260 MLDCWQKERNSRPKFDEIV 278
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANSASKE 107
LP K + P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E
Sbjct: 35 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSF 166
+ ++ H NIV LG ++ E+ G + + L K SF
Sbjct: 95 ALMSELKVLSYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 148
Query: 167 PES-----------------VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIK 209
S + ++ Q+ G+ +L +HRD+ NIL+ + K
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 208
Query: 210 LADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--- 266
+ DFG ++ + + + + WMAPE I ++F +D+WS G + E+ +
Sbjct: 209 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 267 ----GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
G P S+ ++ + F + + PEH E D + C +P R T ++
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
Query: 323 LQ 324
+Q
Sbjct: 322 VQ 323
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E+VG GAFG V + +A+KQ+ S+ + +A I HP
Sbjct: 14 EVVGRGAFGVVCKAKW--RAKDVAIKQI------ESESERKAFI----VELRQLSRVNHP 61
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM---YTKQLLLGLEYLH 186
NIV+ G + + +++E+ GGS+ ++L P + Q G+ YLH
Sbjct: 62 NIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 187 K---NGIMHRDIKGANILVDNKGCI-KLADFGASKKVVELATINGAKSMKGTPYWMAPEV 242
++HRD+K N+L+ G + K+ DFG + + T N KG+ WMAPEV
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEV 174
Query: 243 ILQTGHSFSADIWSVGCTVIEMATGKPPWSQ----QFQEVAALFHIGTTKSHPPIPEHLS 298
+ +S D++S G + E+ T + P+ + F+ + A+ H GT PP+ ++L
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGT---RPPLIKNLP 230
Query: 299 MEAKDFLLKCLQKEPYLRSTASELLQ 324
+ + +C K+P R + E+++
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 10 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 69
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 70 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 127
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
S+ PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 187
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 188 GLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 244 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 297
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 9 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 68
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 69 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 126
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
S+ PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 186
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 187 GLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 243 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 296
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRV-----YMGMNLDSGELLAVKQVLIAANSASKE 107
LP K + P R G+ +G GAFG+V Y + D+ +AVK + +A+ +E
Sbjct: 35 LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLG-KFGSF 166
+ ++ H NIV LG ++ E+ G + + L K SF
Sbjct: 95 ALMSELKVLSYLG------NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 148
Query: 167 PES-----------------VIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIK 209
S + ++ Q+ G+ +L +HRD+ NIL+ + K
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 208
Query: 210 LADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--- 266
+ DFG ++ + + + + WMAPE I ++F +D+WS G + E+ +
Sbjct: 209 ICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 267 ----GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
G P S+ ++ + F + + PEH E D + C +P R T ++
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
Query: 323 LQ 324
+Q
Sbjct: 322 VQ 323
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 46 SKPAVPALPP------IEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLI 99
+KP V + P +E+TD +G G +G VY G+ +AVK +
Sbjct: 198 NKPTVYGVSPNYDKWEMERTDIT-----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-- 250
Query: 100 AANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSL 159
KE T + HPN+V+ LG + I+ EF+ G++
Sbjct: 251 ------KEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 160 LGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
L + +V+ +Y Q+ +EYL K +HR++ N LV +K+ADFG S+
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
Query: 218 KVVELATINGAKSMKGTPY---WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
L T + + G + W APE + S +D+W+ G + E+AT G P+
Sbjct: 364 ----LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+++ ++ + PE + + + C Q P R + +E+ Q
Sbjct: 420 --IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 76
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 77 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
S+ PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 304
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 76
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------GKF 163
+ + H NI+ LG +D L +++E+ G++ L G
Sbjct: 77 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLE 134
Query: 164 GSF-----PESVIRMY-----TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
S+ PE + Q+ G+EYL +HRD+ N+LV +K+ADF
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 214 GASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT--G 267
G ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T G
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 268 KPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
P +E+ L G P L M +D C P R T +L++
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + A S +A + +HP +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEV---------MMKLSHPKL 65
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+S +D+WS G + E+ + GK P+ + EV G P + S +
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIM 238
Query: 306 LKCLQKEPYLRSTASELLQH 325
C ++ P R S LL+
Sbjct: 239 NHCWRERPEDRPAFSRLLRQ 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY+G+ +AVK + KE T + HPN+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 90
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ E++P G++ L + +V+ +Y Q+ +EYL K
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSR----LMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPW 271
S +D+W+ G + E+AT G P+
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ FG ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++G L+AVKQ L + + Q I+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQ-LQHSGPDQQRDFQREIQILKALHSDF---- 85
Query: 128 HPNIVRYLGTARE--DDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEY 184
IV+Y G + SL +++E++P G + L + S + +Y+ Q+ G+EY
Sbjct: 86 ---IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 185 LHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEVI 243
L +HRD+ NILV+++ +K+ADFG +K + + +P +W APE +
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 244 LQTGHSFSADIWSVGCTVIEMAT 266
S +D+WS G + E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 118/306 (38%), Gaps = 52/306 (16%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G++G V + + + A++ + I + ++ + HPNI
Sbjct: 34 IGQGSYGVVRVAI---ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKF---------------------------- 163
R ++ + +++E GG + L F
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 164 -GSFP-----------ESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVD-NKGC-IK 209
GS E +I +Q+ L YLH GI HRDIK N L NK IK
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 210 LADFGASKKVVEL--ATINGAKSMKGTPYWMAPEVILQTGHSF--SADIWSVGCTVIEMA 265
L DFG SK+ +L G + GTPY++APEV+ T S+ D WS G + +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 266 TGKPPWSQQFQEVAALFHIGTTKSHPPIPEH--LSMEAKDFLLKCLQKEPYLRSTASELL 323
G P+ + + + K P + LS A+D L L + R A L
Sbjct: 271 MGAVPFP-GVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329
Query: 324 QHPFVT 329
QHP+++
Sbjct: 330 QHPWIS 335
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 46 SKPAVPALPP------IEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLI 99
+KP V + P +E+TD +G G +G VY G+ +AVK +
Sbjct: 240 NKPTVYGVSPNYDKWEMERTDIT-----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-- 292
Query: 100 AANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSL 159
KE T + HPN+V+ LG + I+ EF+ G++
Sbjct: 293 ------KEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 160 LGKFGSFP-ESVIRMY-TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
L + +V+ +Y Q+ +EYL K +HR++ N LV +K+ADFG S+
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
Query: 218 KVVELATINGAKSMKGTPY---WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
L T + + G + W APE + S +D+W+ G + E+AT G P+
Sbjct: 406 ----LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
+++ ++ + PE + + + C Q P R + +E+ Q
Sbjct: 462 --IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 248 SPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 308 QALAHPYL-AQYYDP 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KP 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 131 IVRYLGTAREDDSLNILLEF-VPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
++R L DS ++LE P + + + G+ E + R + Q+L + + H G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 190 IMHRDIKGANILVD-NKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVI-LQTG 247
++HRDIK NIL+D N+G +KL DFG+ + + + GT + PE I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRY 233
Query: 248 HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLK 307
H SA +WS+G + +M G P+ +E+ + + +S E + +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHD-EEI--------IRGQVFFRQRVSSECQHLIRW 284
Query: 308 CLQKEPYLRSTASELLQHPFV 328
CL P R T E+ HP++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWM 305
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG-SFPESVIRMYTKQLLLGLEYLH 186
H NI+ + + L ++ EF+ G I + E I Y Q+ L++LH
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 187 KNGIMHRDIKGANILVDNK--GCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
+ I H DI+ NI+ + IK+ +FG ++ +L + + + P + APEV
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQF--QEVAALFHIGTTKSHPPIPEHLSMEAK 302
S + D+WS+G V + +G P+ + Q + + + T E +S+EA
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE-ISIEAM 235
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQ 333
DF+ + L KE R TASE LQHP++ K +
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIE 266
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMEPEV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK---------PPWSQQFQEVAALFH 283
T Y+ APEVIL G+ + DIWSVGC + EM K W++ +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 284 IGTTKSHPPIPEHL------------------------------SMEAKDFLLKCLQKEP 313
K P + ++ + +A+D L K L +
Sbjct: 247 AFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G +G VY G+ +AVK + KE T + HPN+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL--------KEDTM-EVEEFLKEAAVMKEIKHPNL 69
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES-VIRMY-TKQLLLGLEYLHKNG 189
V+ LG + I+ EF+ G++ L + S V+ +Y Q+ +EYL K
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQT 246
+HRD+ N LV +K+ADFG S+ L T + + G + W APE +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSR----LMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 247 GHSFSADIWSVGCTVIEMAT-GKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLSME 300
S +D+W+ G + E+AT G P+ SQ ++ + + + PE +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------PEGCPEK 238
Query: 301 AKDFLLKCLQKEPYLRSTASELLQ 324
+ + C Q P R + +E+ Q
Sbjct: 239 VYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ D G ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD+ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 25/258 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 193 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEAFLQEAQV---------MKKLRHEKL 242
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L GK+ P+ V Q+ G+ Y+ +
Sbjct: 243 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 299
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG +++E + K W APE L
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLG-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----HDL 414
Query: 305 LLKCLQKEPYLRSTASEL 322
+ +C +K+P R T L
Sbjct: 415 MCQCWRKDPEERPTFEYL 432
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 306 QALAHPYLE-QYYDP 319
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KP 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPEV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH ++ +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ D G ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 41/304 (13%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+ + + +G GA+G V S V++ +A S + Q + +
Sbjct: 44 RYTQLQYIGEGAYGMV-------SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILL 96
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF---GSFPESVIRMYTKQLLLG 181
H N++ R + ++ + + L K I + Q+L G
Sbjct: 97 RFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG 156
Query: 182 LEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AKSMKGTPYWMAP 240
L+Y+H ++HRD+K +N+L++ +K+ DFG ++ G T ++ AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 241 EVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGTTKSHPPIPEHL 297
E++L + G++ S DIWSVGC + EM + +P P ++ + I + S + +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 298 SMEAK--------------------------DFLLKCLQKEPYLRSTASELLQHPFVTGK 331
+M+A+ D L + L P R T E L HP++ +
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE-Q 335
Query: 332 YQDP 335
Y DP
Sbjct: 336 YYDP 339
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R+ L+G G++G V + ++A+K++L +
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL------IDCKRILREIAI 105
Query: 123 XXXXTHPNIVRYLGTA-----REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H ++V+ L + D L ++LE + L E I+
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYN 164
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV------------------ 219
LL+G++Y+H GI+HRD+K AN LV+ +K+ DFG ++ V
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 220 VELATINGAKSMKG-------TPYWMAPEVI-LQTGHSFSADIWSVGCTVIEM 264
+ L T K++K T ++ APE+I LQ ++ + D+WS+GC E+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 71 LVGCGAFGRVYMGMNLD-SGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++G G FG VY G+ + GE ++ +A + K+ T + HP
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 85
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK-FGSFPESVIRMYTKQLLLGLEYLHKN 188
+IV+ +G E+ + I++E P G + L + S + +Y+ Q+ + YL
Sbjct: 86 HIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
+HRDI NILV + C+KL DFG S + +E A + WM+PE I
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 249 SFSADIWSVGCTVIE-MATGKPP--WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 259
Query: 306 LKCLQKEPYLRSTASELL 323
+C +P R +EL+
Sbjct: 260 TRCWDYDPSDRPRFTELV 277
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 122/300 (40%), Gaps = 40/300 (13%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 2 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES 169
+ + H NI+ LG +D L +++E+ G++ L P
Sbjct: 62 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPG 117
Query: 170 VIRMY------------------TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLA 211
+ Y Q+ G+EYL +HRD+ N+LV +K+A
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 177
Query: 212 DFGASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT- 266
DFG ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
Query: 267 -GKPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
G P +E+ L G P L M +D C P R T +L++
Sbjct: 234 GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 289
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 306 QALAHPYLE-QYYDP 319
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 27/276 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A + H +
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV---------MKKLRHEKL 75
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ G + L GK+ P+ V Q+ G+ Y+ +
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQIASGMAYVER 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +++E + K W APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQF-QEVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ +EV G PP PE L D
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DL 247
Query: 305 LLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVFR 340
+ +C +K+P R T L F+ + P ++
Sbjct: 248 MCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQ 281
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 122/300 (40%), Gaps = 40/300 (13%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVYMG--MNLDSGELLAVKQVLIAA-NSASKEKT 109
LP + + P R G+ +G GAFG+V + + LD + V +V + S + EK
Sbjct: 17 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 76
Query: 110 QAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPES 169
+ + H NI+ LG +D L +++E+ G++ L P
Sbjct: 77 LSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPG 132
Query: 170 VIRMY------------------TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLA 211
+ Y Q+ G+EYL +HRD+ N+LV +K+A
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 212 DFGASKKVVEL----ATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT- 266
DFG ++ + + T NG +K WMAPE + ++ +D+WS G + E+ T
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 267 -GKPPWSQQFQEVAALFHIGTTKSHPP-IPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
G P +E+ L G P L M +D C P R T +L++
Sbjct: 249 GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVE 304
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXX 122
P R++ VG GA+G V + +G +AVK++ + ++ H +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SRPFQSIIHAKRTYRELRL 74
Query: 123 XXXXTHPNIVRYLGT---AREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQ 177
H N++ L AR + N L+ + G +++++ K + ++ Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQ 133
Query: 178 LLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYW 237
+L GL+Y+H I+HRD+K +N+ V+ +K+ D G ++ T + T ++
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARH-----TDDEMTGYVATRWY 188
Query: 238 MAPEVILQTGH-SFSADIWSVGCTVIEMATGK 268
APE++L H + + DIWSVGC + E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 71 LVGCGAFGRVYMGMNLD-SGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++G G FG VY G+ + GE ++ +A + K+ T + HP
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 69
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK-FGSFPESVIRMYTKQLLLGLEYLHKN 188
+IV+ +G E+ + I++E P G + L + S + +Y+ Q+ + YL
Sbjct: 70 HIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
+HRDI NILV + C+KL DFG S + +E A + WM+PE I
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 249 SFSADIWSVGCTVIE-MATGKPP--WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 243
Query: 306 LKCLQKEPYLRSTASELL 323
+C +P R +EL+
Sbjct: 244 TRCWDYDPSDRPRFTELV 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 31/264 (11%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V++G L+ ++ A+K + + S +A + +HP +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFIEEAEV---------MMKLSHPKL 84
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL-GKFGSFPESVIRMYTKQLLLGLEYLHKNGI 190
V+ G E + ++ EF+ G +S L + G F + + G+ YL + +
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 191 MHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEVILQTG 247
+HRD+ N LV IK++DFG ++ V++ + S GT + W +PEV +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD----DQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 248 HSFSADIWSVGCTVIEM-ATGKPPW-----SQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+S +D+WS G + E+ + GK P+ S+ ++++ F + P S
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------PRLASTHV 253
Query: 302 KDFLLKCLQKEPYLRSTASELLQH 325
+ C ++ P R S LL+
Sbjct: 254 YQIMNHCWKERPEDRPAFSRLLRQ 277
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 308 QALAHPYL-AQYYDP 321
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 13/249 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G FG V G +L +++ +A + T+ R HP
Sbjct: 13 QVIGAGEFGEVCSG----HLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKN 188
N++ G + + I+ EF+ GS+ S L + G F + + + G++YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELA---TINGAKSMKGTPYWMAPEVILQ 245
+HR + NILV++ K++DFG S+ + + T A K W APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 246 TGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKD 303
+ ++D+WS G + E M+ G +P W Q+V + I PP P
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV--INAIEQDYRLPP-PMDCPSALHQ 245
Query: 304 FLLKCLQKE 312
+L C QK+
Sbjct: 246 LMLDCWQKD 254
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 187
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 308 SKRISVDEALQHPYINVWY-DP 328
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 285
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 286 EVMLKCWHPKAEMRPSFSELV 306
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G G G FG VY G + +AVK++ + ++E Q H
Sbjct: 27 GNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVXAKCQH 80
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK---QLLLGLEYL 185
N+V LG + + D L ++ + P GS+ L P K G+ +L
Sbjct: 81 ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFL 140
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
H+N +HRDIK ANIL+D K++DFG ++ + A + GT + APE L+
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEA-LR 199
Query: 246 TGHSFSADIWSVGCTVIEMATGKPPWSQQ 274
+ +DI+S G ++E+ TG P +
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLPAVDEH 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 71 LVGCGAFGRVYMGMNLD-SGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
++G G FG VY G+ + GE ++ +A + K+ T + HP
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGE-----KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK-FGSFPESVIRMYTKQLLLGLEYLHKN 188
+IV+ +G E+ + I++E P G + L + S + +Y+ Q+ + YL
Sbjct: 74 HIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGH 248
+HRDI NILV + C+KL DFG S + +E A + WM+PE I
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 249 SFSADIWSVGCTVIE-MATGKPP--WSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ ++D+W + E ++ GK P W + ++V + G P P+ +
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKG---DRLPKPDLCPPVLYTLM 247
Query: 306 LKCLQKEPYLRSTASELL 323
+C +P R +EL+
Sbjct: 248 TRCWDYDPSDRPRFTELV 265
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 43/294 (14%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G GAFG+V N A+K++ T+ + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI---------RHTEEKLSTILSEVMLLASLNHQY 63
Query: 131 IVRY-------------LGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYT 175
+VRY + ++ +L I +E+ G++ L+ + R++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF- 122
Query: 176 KQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATI---------- 225
+Q+L L Y+H GI+HRD+K NI +D +K+ DFG +K V I
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 226 --NGAKSMKGTPYWMAPEVILQTGH-SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
+ S GT ++A EV+ TGH + D++S+G EM P+S + V L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 283 HIGTTK-SHPPIPEHLSMEAKDFLLKCL-QKEPYLRSTASELLQHPFVTGKYQD 334
+ + PP + M+ + +++ L +P R A LL ++ K+QD
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMK---- 232
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMVPFV 188
Query: 233 GTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + DIWSVGC + EM G P
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 248
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 308
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 309 SKRISVDEALQHPYINVWY-DP 329
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 128/325 (39%), Gaps = 76/325 (23%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKE-----KTQAHIRXXXXX 119
R++ + +G GA G V +A ++ N A K+ + Q H +
Sbjct: 25 RYQNLKPIGSGAQGIV-----------VAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 120 XXXXXXXTHPNIVRYLGTAREDDSLN------ILLEFVPGGSISSLLGKFGSFPESVIRM 173
H NI+ L SL I++E + ++S ++ +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLL 132
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Y Q+L+G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 133 Y--QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMT 183
Query: 234 ----TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG---------------------- 267
T Y+ APEVIL G+ + DIWSVG + EM G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 268 -KPPWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQ 310
P + ++ Q + K P EH + +A+D L K L
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 311 KEPYLRSTASELLQHPFVTGKYQDP 335
+ R + E LQHP++ Y DP
Sbjct: 304 IDASKRISVDEALQHPYINVWY-DP 327
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 266
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 267 EVMLKCWHPKAEMRPSFSELV 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 259
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 260 EVMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 286
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 287 EVMLKCWHPKAEMRPSFSELV 307
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 267
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 267
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 266
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 267 EVMLKCWHPKAEMRPSFSELV 287
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 264
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 265 EVMLKCWHPKAEMRPSFSELV 285
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 314 QALAHPYLE-QYYDP 327
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 306 QALAHPYLE-QYYDP 319
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 308 QALAHPYLE-QYYDP 321
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLL---GKFGSFPESVIRMYTKQLLLGLE 183
+HP +V++ G ++ + I+ E++ G + + L GK G P ++ M + G+
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEM-CYDVCEGMA 118
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAP 240
+L + +HRD+ N LVD C+K++DFG ++ V++ ++ GT + W AP
Sbjct: 119 FLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV----GTKFPVKWSAP 174
Query: 241 EVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSM 299
EV +S +D+W+ G + E+ + GK P+ L ++ H HL+
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL---KVSQGHRLYRPHLAS 231
Query: 300 EA-KDFLLKCLQKEPYLRSTASELL 323
+ + C + P R T +LL
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 326 QALAHPYLE-QYYDP 339
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L+G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-------LARTAGTSFMMTPYV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATG-----------------------KP 269
T Y+ APEVIL G+ + DIWSVG + EM G P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 265
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 266 EVMLKCWHPKAEMRPSFSELV 286
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 262
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 263 EVMLKCWHPKAEMRPSFSELV 283
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 311 QALAHPYLE-QYYDP 324
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 35/298 (11%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G GA+G V +G+ +A+K++ A + + K
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+I+R E S+ ++L+ + + ++ +R + QLL GL+Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQTG 247
++HRD+K +N+LV+ +K+ DFG ++ + + T ++ APE++L
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL- 238
Query: 248 HSFSA--DIWSVGCTVIEMATGK-----PPWSQQFQEVAALF------------------ 282
H ++ D+WSVGC EM + + Q Q + +
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRA 298
Query: 283 HIGTTKSHPPIPEHLSMEAKD-----FLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+I + P+P D L + L+ EP R +A+ L+HPF+ KY DP
Sbjct: 299 YIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL-AKYHDP 355
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 136 GTAREDDSLNILLEFVPGGSISSLLGKFGSF--------PESVIRMYTKQLLLGLEYLH- 186
G D + I+ E++ SI F P VI+ K +L Y+H
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 187 KNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
+ I HRD+K +NIL+D G +KL+DFG S+ +V+ I G+ +GT +M PE
Sbjct: 170 EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD-KKIKGS---RGTYEFMPPE-FFSN 224
Query: 247 GHSFS---ADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH------- 296
S++ DIWS+G + M P+S + V +I T P+ +
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT 284
Query: 297 ----------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
LS E DFL L+K P R T+ + L+H ++
Sbjct: 285 NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 306 QALAHPYLE-QYYDP 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 311 QALAHPYLE-QYYDP 324
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 312 QALAHPYLE-QYYDP 325
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 303 QALAHPYLE-QYYDP 316
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 310 QALAHPYLE-QYYDP 323
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 304 QALAHPYLE-QYYDP 317
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ S + ++++A+++LL K L P+ R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 306 QALAHPYLE-QYYDP 319
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 191
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + D+WSVGC + EM K P
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 251
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 252 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 312 SKRISVDEALQHPYINVWY-DP 332
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 72 VGCGAFGRV----YMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G G FG V Y + ++G L+AVKQ L + + Q I+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQ-LQHSGPDQQRDFQREIQILKA--------L 65
Query: 128 HPN-IVRYLGTARE--DDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H + IV+Y G + L +++E++P G + L + S + +Y+ Q+ G+E
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTP-YWMAPEV 242
YL +HRD+ NILV+++ +K+ADFG +K + + +P +W APE
Sbjct: 126 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT 266
+ S +D+WS G + E+ T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ ++ E +++ K WMA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 268
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 269 EVMLKCWHPKAEMRPSFSELV 289
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMEPEV 186
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + D+WSVGC + EM K P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 307 SKRISVDEALQHPYINVWY-DP 327
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 326
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 327 EVMLKCWHPKAEMRPSFSELV 347
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 23/257 (8%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG + +A+K + S +A I H +
Sbjct: 17 LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQI---------MKKLKHDKL 66
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ E+ + I+ E++ GS+ L G+ P +++ M Q+ G+ Y+ +
Sbjct: 67 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLP-NLVDM-AAQVAAGMAYIER 123
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV N K+ADFG + +++E + K W APE L
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ +D+WS G + E+ T G+ P+ +EV G P P+ + + +
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM---PCPQDCPISLHELM 239
Query: 306 LKCLQKEPYLRSTASEL 322
+ C +K+P R T L
Sbjct: 240 IHCWKKDPEERPTFEYL 256
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 35/298 (11%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G GA+G V +G+ +A+K++ A + + K
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+I+R E S+ ++L+ + + ++ +R + QLL GL+Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATING--AKSMKGTPYWMAPEVILQTG 247
++HRD+K +N+LV+ +K+ DFG ++ + + T ++ APE++L
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL- 237
Query: 248 HSFSA--DIWSVGCTVIEMATGK-----PPWSQQFQEVAALF------------------ 282
H ++ D+WSVGC EM + + Q Q + +
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRA 297
Query: 283 HIGTTKSHPPIPEHLSMEAKD-----FLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+I + P+P D L + L+ EP R +A+ L+HPF+ KY DP
Sbjct: 298 YIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL-AKYHDP 354
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
Q+L G+++LH GI+HRD+K +NI+V + +K+ DFG LA G M
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-------LARTAGTSFMMTPYV 180
Query: 234 -TPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-----------------------P 269
T Y+ APEVIL G+ + D+WSVGC + EM K P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 270 PWSQQFQEVAALFHIGTTKS-------------HPPIPEHLSM---EAKDFLLKCLQKEP 313
+ ++ Q + K P EH + +A+D L K L +
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 314 YLRSTASELLQHPFVTGKYQDP 335
R + E LQHP++ Y DP
Sbjct: 301 SKRISVDEALQHPYINVWY-DP 321
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI+R T ++ + +++E GG + + F ES K +L + Y HK
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 188 NGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMK---GTPYWMAPE 241
+ HRD+K N L +KL DFG + A K M+ GTPY+++P+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------ARFKPGKMMRTKVGTPYYVSPQ 195
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSME 300
V L+ + D WS G + + G PP+S EV GT ++S +
Sbjct: 196 V-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 254
Query: 301 AKDFLLKCLQKEPYLRSTASELLQH 325
A+ + + L K P R T+ + L+H
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEH 279
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNI+R T ++ + +++E GG + + F ES K +L + Y HK
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 188 NGIMHRDIKGANILV---DNKGCIKLADFGASKKVVELATINGAKSMK---GTPYWMAPE 241
+ HRD+K N L +KL DFG + A K M+ GTPY+++P+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------ARFKPGKMMRTKVGTPYYVSPQ 178
Query: 242 VILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSME 300
V L+ + D WS G + + G PP+S EV GT ++S +
Sbjct: 179 V-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 237
Query: 301 AKDFLLKCLQKEPYLRSTASELLQH 325
A+ + + L K P R T+ + L+H
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEH 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G G FG VY G +D + ++ A S S+ + HPN
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQ----NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 131 IVRYLGTAREDDSL-NILLEFVPGGSISSLLGKFGSFP--ESVIRMYTKQLLLGLEYLHK 187
++ +G + L ++LL ++ G + + P + +I + Q+ G+EYL +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVARGMEYLAE 142
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D +K+ADFG ++ ++ E ++ + + W A E +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDF 304
+ +D+WS G + E+ T G PP+ + L H P PE+
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRH--IDPFDLTHFLAQGRRLPQPEYCPDSLYQV 260
Query: 305 LLKCLQKEPYLRSTASELL 323
+ +C + +P +R T L+
Sbjct: 261 MQQCWEADPAVRPTFRVLV 279
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG +S ++ AVK + S +A++ H +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAFLEEANL---------MKTLQHDKL 70
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL--GKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
VR ++ + I+ E++ GS+ L + G + ++ Q+ G+ Y+ +
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS 249
+HRD++ AN+LV K+ADFG + +V+E + K W APE I +
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 250 FSADIWSVGCTVIEMAT-GKPPW 271
+D+WS G + E+ T GK P+
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 267
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 272
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 273 EVMLKCWHPKAEMRPSFSELV 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 268
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 269 EVMLKCWHPKAEMRPSFSELV 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 265
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 266 EVMLKCWHPKAEMRPSFSELV 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E++G G FG VY G LD+ K++ A S ++ + +HP
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 130 NIVRYLGTA-REDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM-YTKQLLLGLEYLHK 187
N++ LG R + S ++L ++ G + + + P + + Q+ G+++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVV--ELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N ++D K +K+ADFG ++ + E +++ K WMA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPW--SQQFQEVAALFHIGTTKSHPPIPEHLSMEAK 302
+ +D+WS G + E+ T G PP+ F L PE+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----PEYCPDPLY 267
Query: 303 DFLLKCLQKEPYLRSTASELL 323
+ +LKC + +R + SEL+
Sbjct: 268 EVMLKCWHPKAEMRPSFSELV 288
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK---------FGSFPESVIRMYTKQL 178
HPNI+ LG L + +E+ P G++ L K F + + ++QL
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 179 L-------LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSM 231
L G++YL + +HRD+ NILV K+ADFG S+ + K+M
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG----QEVYVKKTM 190
Query: 232 KGTPY-WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKS 289
P WMA E + + ++ ++D+WS G + E+ + G P+ A L+
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGY 248
Query: 290 HPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELL 323
P + E D + +C +++PY R + +++L
Sbjct: 249 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 73 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 248
Query: 302 KDFLLKCLQKEPYLRSTASEL 322
+ +++C +P R T L
Sbjct: 249 YNVMVQCWAHKPEDRPTFVAL 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 30/302 (9%)
Query: 30 VEKIGSSIRKSRIGLFSKPAVPAL-----PPIEKT--DAPPIRWRKGELVGCGAFGRVYM 82
++++ +K GL K +VP + P EK + P + + +G G FG V+M
Sbjct: 147 LQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM 206
Query: 83 GMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDD 142
+ +AVK + + S +A++ H +V+ L +
Sbjct: 207 A-TYNKHTKVAVKTMKPGSMSVEAFLAEANV---------MKTLQHDKLVK-LHAVVTKE 255
Query: 143 SLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGA 198
+ I+ EF+ GS+ L G P+ + ++ Q+ G+ ++ + +HRD++ A
Sbjct: 256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNYIHRDLRAA 313
Query: 199 NILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVG 258
NILV K+ADFG + +V+E + K W APE I + +D+WS G
Sbjct: 314 NILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372
Query: 259 CTVIEMAT-GKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLR 316
++E+ T G+ P+ EV G P PE+ E + +++C + P R
Sbjct: 373 ILLMEIVTYGRIPYPGMSNPEVIRALERGY---RMPRPENCPEELYNIMMRCWKNRPEER 429
Query: 317 ST 318
T
Sbjct: 430 PT 431
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATING-AK 229
I + Q+L GL+Y+H ++HRD+K +N+L++ +K+ DFG ++ G
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 230 SMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHIGT 286
T ++ APE++L + G++ S DIWSVGC + EM + +P P ++ + I
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 287 TKSHPPIPEHLSMEAKDFLL--------------------------KCLQKEPYLRSTAS 320
+ + ++++A+++LL K L P+ R
Sbjct: 244 SPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 321 ELLQHPFVTGKYQDP 335
+ L HP++ +Y DP
Sbjct: 304 QALAHPYLE-QYYDP 317
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+MG +S ++ AVK + S +A++ H +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAFLEEANL---------MKTLQHDKL 69
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL--GKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
VR +++ + I+ EF+ GS+ L + G + ++ Q+ G+ Y+ +
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 190 IMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHS 249
+HRD++ AN+LV K+ADFG + +V+E + K W APE I +
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 250 FSADIWSVGCTVIEMAT-GKPPW 271
+++WS G + E+ T GK P+
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPY 211
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK---------FGSFPESVIRMYTKQL 178
HPNI+ LG L + +E+ P G++ L K F + + ++QL
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 179 L-------LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSM 231
L G++YL + +HRD+ NILV K+ADFG S+ + K+M
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG----QEVYVKKTM 200
Query: 232 KGTPY-WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKS 289
P WMA E + + ++ ++D+WS G + E+ + G P+ A L+
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGY 258
Query: 290 HPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELL 323
P + E D + +C +++PY R + +++L
Sbjct: 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 259
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 260 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 163
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 219
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALFH-------------- 283
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 220 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIE 279
Query: 284 --------IGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 280 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 338
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 11/258 (4%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G V G G+ + V +A + T+ R HP
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQ----RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKN 188
NI+R G I+ E++ GS+ + L G F + + + G+ YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEVILQTG 247
G +HRD+ N+LVD+ K++DFG S+ + + + P W APE I
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 248 HSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
S ++D+WS G + E +A G +P W+ ++V + G P P +
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---RLPAPMGCPHALHQLM 287
Query: 306 LKCLQKEPYLRSTASELL 323
L C K+ R S+++
Sbjct: 288 LDCWHKDRAQRPRFSQIV 305
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 144
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 200
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 201 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 260
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 261 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 259
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 260 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 11/257 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 79 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 254
Query: 302 KDFLLKCLQKEPYLRST 318
+ +++C +P R T
Sbjct: 255 YNVMVQCWAHKPEDRPT 271
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 19/262 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+++G G G V G G+ + V +A + T+ R HP
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQ----RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYLHKN 188
NI+R G I+ E++ GS+ + L G F + + + G+ YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 189 GIMHRDIKGANILVDNKGCIKLADFGASKKVVE-----LATINGAKSMKGTPYWMAPEVI 243
G +HRD+ N+LVD+ K++DFG S+ + + T G ++ W APE I
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR----WTAPEAI 226
Query: 244 LQTGHSFSADIWSVGCTVIE-MATG-KPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
S ++D+WS G + E +A G +P W+ ++V + G P P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---RLPAPMGCPHAL 283
Query: 302 KDFLLKCLQKEPYLRSTASELL 323
+L C K+ R S+++
Sbjct: 284 HQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 11/257 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 79 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 254
Query: 302 KDFLLKCLQKEPYLRST 318
+ +++C +P R T
Sbjct: 255 YNVMVQCWAHKPEDRPT 271
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV------LIAANSASKEKTQAHIRXX 116
P + L+G G++G VY+ + ++ + +A+K+V LI +E T +
Sbjct: 27 PDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 86
Query: 117 XXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK 176
+++++ D L I+LE + + L E ++
Sbjct: 87 DYIIRLHDLIIPEDLLKF-------DELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILY 138
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKV---VELATINGA----- 228
LLLG +++H++GI+HRD+K AN L++ +K+ DFG ++ + ++ +N
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 229 --------KSMKG-------TPYWMAPEVI-LQTGHSFSADIWSVGCTVIEM 264
K++K T ++ APE+I LQ ++ S DIWS GC E+
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 69 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 244
Query: 302 KDFLLKCLQKEPYLRSTASEL 322
+ +++C +P R T L
Sbjct: 245 YNVMVQCWAHKPEDRPTFVAL 265
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 129 PNIVRYLGTAREDDSL--NILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLH 186
PNIV+ L R+ S +++ E+V L + + + IR Y +LL L+Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 187 KNGIMHRDIKGANILVDNK-GCIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVIL 244
GIMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG----LAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 245 Q-TGHSFSADIWSVGCTVIEMATGKPPW------SQQFQEVAALF--------------- 282
+ +S D+WS+GC M K P+ Q ++A +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 283 -------HIGTTKSHPPIP------EHL-SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+G P + +HL S EA DFL K L+ + R TA E + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQFQEVAALFHIGTTKSH 290
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 321
Query: 291 PPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P++ + E +L C EP R T SEL++H
Sbjct: 322 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQFQEVAALFHIGTTKSH 290
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 323
Query: 291 PPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P++ + E +L C EP R T SEL++H
Sbjct: 324 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 69 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 244
Query: 302 KDFLLKCLQKEPYLRSTASEL 322
+ +++C +P R T L
Sbjct: 245 YNVMVQCWAHKPEDRPTFVAL 265
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWS--QQFQEVAALFHIGTTKSH 290
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 316
Query: 291 PPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P++ + E +L C EP R T SEL++H
Sbjct: 317 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 43/294 (14%)
Query: 71 LVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPN 130
++G GAFG+V N A+K++ T+ + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI---------RHTEEKLSTILSEVMLLASLNHQY 63
Query: 131 IVRY-------------LGTAREDDSLNILLEFVPGGSISSLLG--KFGSFPESVIRMYT 175
+VRY + ++ +L I +E+ ++ L+ + R++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 176 KQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATI---------- 225
+Q+L L Y+H GI+HRD+K NI +D +K+ DFG +K V I
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 226 --NGAKSMKGTPYWMAPEVILQTGH-SFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
+ S GT ++A EV+ TGH + D++S+G EM P+S + V L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 283 HIGTTK-SHPPIPEHLSMEAKDFLLKCL-QKEPYLRSTASELLQHPFVTGKYQD 334
+ + PP + M+ + +++ L +P R A LL ++ K+QD
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 23/253 (9%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G FG V+M + +AVK + + S +A++ H +
Sbjct: 23 LGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANV---------MKTLQHDKL 72
Query: 132 VRYLGTAREDDSLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHK 187
V+ L + + I+ EF+ GS+ L G P+ + ++ Q+ G+ ++ +
Sbjct: 73 VK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQ 129
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV K+ADFG + +V+E + K W APE I
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ +D+WS G ++E+ T G+ P+ EV G P PE+ E + +
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENCPEELYNIM 245
Query: 306 LKCLQKEPYLRST 318
++C + P R T
Sbjct: 246 MRCWKNRPEERPT 258
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG 233
Y+ Q+ G+E+L +HRD+ NIL+ K +K+ DFG ++ + + +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 234 TPYWMAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPW--SQQFQEVAALFHIGTTKSH 290
WMAPE I ++ +D+WS G + E+ + G P+ + +E GT
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR- 314
Query: 291 PPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P++ + E +L C EP R T SEL++H
Sbjct: 315 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 73 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 248
Query: 302 KDFLLKCLQKEPYLRSTASEL 322
+ +++C +P R T L
Sbjct: 249 YNVMVQCWAHKPEDRPTFVAL 269
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 67 RKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASK-EKTQAHIRXXXXXXXXXX 124
R E +G G+FG V G + SG+ ++V + + S+ E IR
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLE 183
H N++R G + ++ E P GS+ L K G F + Y Q+ G+
Sbjct: 69 --DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 184 YLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY-WMAPEV 242
YL +HRD+ N+L+ + +K+ DFG + + + + + P+ W APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKSHPPIPEHLSMEA 301
+ S ++D W G T+ EM T G+ PW L I P PE +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI 244
Query: 302 KDFLLKCLQKEPYLRSTASEL 322
+ +++C +P R T L
Sbjct: 245 YNVMVQCWAHKPEDRPTFVAL 265
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 39/272 (14%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRX-XXXXXXXXXXXTHPN 130
+G GAFGRV+ + LL + + A KE+ A ++ +PN
Sbjct: 55 IGEGAFGRVFQA---RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 131 IVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRM----------------- 173
IV+ LG + +L E++ G ++ L P +V +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS--PHTVCSLSHSDLSTRARVSSPGPP 169
Query: 174 ---------YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELAT 224
+Q+ G+ YL + +HRD+ N LV +K+ADFG S+ + A
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS-AD 228
Query: 225 INGAKSMKGTPY-WMAPEVILQTGHSFSADIWSVGCTVIEMATG--KPPWSQQFQEVAAL 281
A P WM PE I ++ +D+W+ G + E+ + +P + +EV
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 282 FHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEP 313
G + PE+ +E + + C K P
Sbjct: 289 VRDGNILA---CPENCPLELYNLMRLCWSKLP 317
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 63 PIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQV------LIAANSASKEKTQAHIRXX 116
P + L+G G++G VY+ + ++ + +A+K+V LI +E T +
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84
Query: 117 XXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTK 176
+++++ D L I+LE + + L E I+
Sbjct: 85 DYIIRLYDLIIPDDLLKF-------DELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 177 QLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKG--- 233
LLLG ++H++GI+HRD+K AN L++ +K+ DFG ++ + N ++
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 234 -----------------TPYWMAPEVI-LQTGHSFSADIWSVGCTVIEM 264
T ++ APE+I LQ ++ S DIWS GC E+
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 29/302 (9%)
Query: 56 IEKTDAPPIRWRKGELVGCGAFGRVYMG-MNLDSGELLAVKQVLIAANSASKEKTQAHIR 114
+E P ++ G ++G G FG V + + G + V ++ A+ + + +R
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 115 XXXXXXXXXXXXTHPNIVRYLGTA---REDDSLNI---LLEFVPGGSISSLL--GKFGSF 166
HP++ + +G + R L I +L F+ G + + L + G
Sbjct: 75 EAACMKEF----DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 167 P-----ESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVE 221
P ++++R + + G+EYL +HRD+ N ++ + +ADFG S+K+
Sbjct: 131 PFNLPLQTLVR-FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 222 LATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAA 280
+ K W+A E + ++ +D+W+ G T+ E+ T G+ P++
Sbjct: 190 GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY 249
Query: 281 LFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEP-------YLRSTASELLQHPFVTGKYQ 333
+ IG + P PE + E D + +C +P LR +L H V Q
Sbjct: 250 NYLIGGNRLKQP-PECME-EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307
Query: 334 DP 335
DP
Sbjct: 308 DP 309
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK--FGSFPESVIRMYTKQLLLGLEYL 185
HPNIV Y T D+ L ++ F+ GS L+ E I + +L L+Y+
Sbjct: 69 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADF---------GASKKVVELATINGAKSMKGTPY 236
H G +HR +K ++IL+ G + L+ G ++VV S+K P
Sbjct: 129 HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP---KYSVKVLP- 184
Query: 237 WMAPEVILQT--GHSFSADIWSVGCTVIEMATGKPPW-----SQQFQE-----VAALFHI 284
W++PEV+ Q G+ +DI+SVG T E+A G P+ +Q E V L
Sbjct: 185 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 244
Query: 285 GT-----------------------TKSHP----------PIPEHLSMEAKDFLLKCLQK 311
T T S P P S F+ +CLQ+
Sbjct: 245 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 304
Query: 312 EPYLRSTASELLQHPF 327
P R +AS LL H F
Sbjct: 305 NPDARPSASTLLNHSF 320
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK---------FGSFPESVIRMYTKQL 178
HPNI+ LG L + +E+ P G++ L K F + + ++QL
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 179 L-------LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSM 231
L G++YL + +HR++ NILV K+ADFG S+ + K+M
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG----QEVYVKKTM 197
Query: 232 KGTPY-WMAPEVILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQQFQEVAALFHIGTTKS 289
P WMA E + + ++ ++D+WS G + E+ + G P+ A L+
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGY 255
Query: 290 HPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELL 323
P + E D + +C +++PY R + +++L
Sbjct: 256 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGK--FGSFPESVIRMYTKQLLLGLEYL 185
HPNIV Y T D+ L ++ F+ GS L+ E I + +L L+Y+
Sbjct: 85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 144
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADF---------GASKKVVELATINGAKSMKGTPY 236
H G +HR +K ++IL+ G + L+ G ++VV S+K P
Sbjct: 145 HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP---KYSVKVLP- 200
Query: 237 WMAPEVILQT--GHSFSADIWSVGCTVIEMATGKPPW-----SQQFQE-----VAALFHI 284
W++PEV+ Q G+ +DI+SVG T E+A G P+ +Q E V L
Sbjct: 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260
Query: 285 GT-----------------------TKSHP----------PIPEHLSMEAKDFLLKCLQK 311
T T S P P S F+ +CLQ+
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 320
Query: 312 EPYLRSTASELLQHPF 327
P R +AS LL H F
Sbjct: 321 NPDARPSASTLLNHSF 336
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 50/260 (19%)
Query: 130 NIVRYLGTAREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
NI++ + T ++ S ++ E++ L F IR Y +LL L+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHS 150
Query: 188 NGIMHRDIKGANILVDN-KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GIMHRD+K N+++D+ + ++L D+G ++ N + + Y+ PE+++
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR---YFKGPELLVDY 207
Query: 247 G-HSFSADIWSVGCTVIEMATGKPPWSQ------QFQEVAALFHIGT-------TKSHPP 292
+ +S D+WS+GC + M + P+ Q +A + +GT K H
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV--LGTEELYGYLKKYHID 265
Query: 293 IPEHL------------------------SMEAKDFLLKCLQKEPYLRSTASELLQHPFV 328
+ H S EA D L K L+ + R TA E ++HP+
Sbjct: 266 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
Query: 329 TGKYQD-PHPVFRNSVMESG 347
++ P N+V+ SG
Sbjct: 326 YPVVKEQSQPSADNAVLSSG 345
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 25/231 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP 167
+ ++ H NIV LG + ++ E+ G + + L +
Sbjct: 95 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 168 ESV--------------IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
E+ + ++ Q+ G+ +L +HRD+ N+L+ N K+ DF
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 214 GASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
G ++ ++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 25/231 (10%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFP 167
+ ++ H NIV LG + ++ E+ G + + L +
Sbjct: 95 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 168 ESV--------------IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
E+ + ++ Q+ G+ +L +HRD+ N+L+ N K+ DF
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 214 GASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
G ++ ++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 48/297 (16%)
Query: 67 RKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXX 126
R G+ +GCG FG + +G NL + E +A+K I + + Q H+
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP-----QLHLEYRFYKQLGSAGE 57
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFG-SFPESVIRMYTKQLLLGLEYL 185
P V Y G + +++ +LE + G S+ L +F + M QLL +EY+
Sbjct: 58 GLPQ-VYYFGPXGKYNAM--VLELL-GPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYV 113
Query: 186 HKNGIMHRDIKGANILVDNKG-----CIKLADFGASKKVVELAT-----INGAKSMKGTP 235
H +++RD+K N L+ +G I + DFG +K+ ++ T KS+ GT
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTA 173
Query: 236 YWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWS--------QQFQEVAALFHIGTT 287
+M+ L S D+ ++G + G PW +++Q+ IG T
Sbjct: 174 RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQK------IGDT 227
Query: 288 KSHPPI-------PEHLSMEAK-----DFLLKCLQKEPYLRSTASELLQHPFVTGKY 332
K + PI PE ++ + DF K YLR+ ++L + T Y
Sbjct: 228 KRNTPIEALCENFPEEMATYLRYVRRLDFFEK--PDYEYLRTLFTDLFEKKGYTFDY 282
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 41/285 (14%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V V A + + + +R H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTV--AVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---KFG---------------SFP-ES 169
P++++ G +D L +++E+ GS+ L K G P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 170 VIRM-----YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELAT 224
+ M + Q+ G++YL + ++HRD+ NILV +K++DFG S+ V E +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 225 INGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-------GKPPWSQQFQE 277
+ WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP------- 258
Query: 278 VAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
LF++ T P++ S E +L+C ++EP R +++
Sbjct: 259 -ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 60 DAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVL----IAANSASKEKTQAHIRX 115
D R+ +++G G+FG+V + + +A+K V +A + + H+R
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 116 XXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL--GKFGSFPESVIRM 173
N++ L + + + E + ++ L+ KF F ++R
Sbjct: 153 QDKDNTM-------NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK 204
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKG--CIKLADFGASKKVVELATINGAKSM 231
+ +L L+ LHKN I+H D+K NIL+ +G IK+ DFG+S +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEHQRVYTX 259
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKP 269
+ ++ APEVIL + D+WS+GC + E+ TG P
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
DFL +CL+ +P +R T + L+HP++ + P
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 41/285 (14%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V V A + + + +R H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTV--AVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---KFG---------------SFP-ES 169
P++++ G +D L +++E+ GS+ L K G P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 170 VIRM-----YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELAT 224
+ M + Q+ G++YL + ++HRD+ NILV +K++DFG S+ V E +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 225 INGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-------GKPPWSQQFQE 277
+ WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP------- 258
Query: 278 VAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
LF++ T P++ S E +L+C ++EP R +++
Sbjct: 259 -ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 60 DAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVL----IAANSASKEKTQAHIRX 115
D R+ +++G G+FG+V + + +A+K V +A + + H+R
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 116 XXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL--GKFGSFPESVIRM 173
N++ L + + + E + ++ L+ KF F ++R
Sbjct: 153 QDKDNTM-------NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK 204
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKG--CIKLADFGASKKVVELATINGAKSM 231
+ +L L+ LHKN I+H D+K NIL+ +G IK+ DFG+S +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEHQRVYTX 259
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKP 269
+ ++ APEVIL + D+WS+GC + E+ TG P
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFV 328
DFL +CL+ +P +R T + L+HP++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 38/255 (14%)
Query: 64 IRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXX 123
+R R ++ G F VY ++ SG A+K++L S +EK +A I+
Sbjct: 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLL----SNEEEKNRAIIQEVCFMKKLS 83
Query: 124 XXXTHPNIVRYLGTA----REDDSLN---ILLEFVPGGSISSLLGKFGSFP----ESVIR 172
HPNIV++ A E D+ +LL + G + L K S ++V++
Sbjct: 84 G---HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 173 MYTKQLLLGLEYLHKNG--IMHRDIKGANILVDNKGCIKLADFGASKKVVEL-------- 222
++ Q ++++H+ I+HRD+K N+L+ N+G IKL DFG++ +
Sbjct: 141 IFY-QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 223 --ATINGAKSMKGTPYWMAPEVI-LQTGHSF--SADIWSVGCTVIEMATGKPPWSQQFQE 277
A + + TP + PE+I L + DIW++GC + + + P F++
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----FED 255
Query: 278 VAALFHIGTTKSHPP 292
A L + S PP
Sbjct: 256 GAKLRIVNGKYSIPP 270
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 27 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 86
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------- 160
+ ++ H NIV LG + ++ E+ G + + L
Sbjct: 87 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 140
Query: 161 -GKFGSFPESV--IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
K P + + ++ Q+ G+ +L +HRD+ N+L+ N K+ DFG ++
Sbjct: 141 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 218 KVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------- 160
+ ++ H NIV LG + ++ E+ G + + L
Sbjct: 95 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 148
Query: 161 -GKFGSFPESV--IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASK 217
K P + + ++ Q+ G+ +L +HRD+ N+L+ N K+ DFG ++
Sbjct: 149 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 218 KVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 41/285 (14%)
Query: 69 GELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTH 128
G+ +G G FG+V V A + + + +R H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTV--AVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 129 PNIVRYLGTAREDDSLNILLEFVPGGSISSLLG---KFG---------------SFP-ES 169
P++++ G +D L +++E+ GS+ L K G P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 170 VIRM-----YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELAT 224
+ M + Q+ G++YL + ++HRD+ NILV +K++DFG S+ V E +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 225 INGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMAT-------GKPPWSQQFQE 277
+ WMA E + ++ +D+WS G + E+ T G PP
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP------- 258
Query: 278 VAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASEL 322
LF++ T P++ S E +L+C ++EP R +++
Sbjct: 259 -ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
HPNIV+ + +++E + GG + + K F E+ ++L+ + ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 188 NGIMHRDIKGANILVDNKGC---IKLADFGASKKVVELATINGAKSMKGTPYWMAPEVIL 244
G++HRD+K N+L ++ IK+ DFG ++ ++ K+ T ++ APE++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 245 QTGHSFSADIWSVGCTVIEMATGKPPWSQQFQ--------EVAALFHIGTTKSHPPIPEH 296
Q G+ S D+WS+G + M +G+ P+ + E+ G ++
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASEL 322
+S EAKD + L +P R S L
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGL 268
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 57/296 (19%)
Query: 72 VGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNI 131
+G G + V+ +N+ + E + VK K K + I+ PNI
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVK----ILKPVKKNKIKREIKILENLRGG------PNI 94
Query: 132 VRYLGTAREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNG 189
+ ++ S ++ E V L + + + IR Y ++L L+Y H G
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 190 IMHRDIKGANILVDNKG-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG 247
IMHRD+K N+++D++ ++L D+G + E +++ + Y+ PE+++
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 248 -HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH------ 296
+ +S D+WS+GC + M K P+ L I GT + I ++
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 297 -------------------------LSMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+S EA DFL K L+ + R TA E ++HP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 40/302 (13%)
Query: 30 VEKIGSSIRKSRIGLFSKPAVPAL-----PPIEKT--DAPPIRWRKGELVGCGAFGRVYM 82
++++ +K GL K +VP + P EK + P + + +G G FG V+M
Sbjct: 141 LQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM 200
Query: 83 GMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDD 142
+ +AVK + + S +A++ H +V+ L +
Sbjct: 201 A-TYNKHTKVAVKTMKPGSMSVEAFLAEANV---------MKTLQHDKLVK-LHAVVTKE 249
Query: 143 SLNILLEFVPGGSISSLL----GKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGA 198
+ I+ EF+ GS+ L G P+ + ++ Q+ G+ ++ + +HRD++ A
Sbjct: 250 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNYIHRDLRAA 307
Query: 199 NILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVG 258
NILV K+ADFG LA + +K W APE I + +D+WS G
Sbjct: 308 NILVSASLVCKIADFG-------LARVGAKFPIK----WTAPEAINFGSFTIKSDVWSFG 356
Query: 259 CTVIEMAT-GKPPW-SQQFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLR 316
++E+ T G+ P+ EV G P PE+ E + +++C + P R
Sbjct: 357 ILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENCPEELYNIMMRCWKNRPEER 413
Query: 317 ST 318
T
Sbjct: 414 PT 415
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL------G 161
+ ++ H NIV LG + ++ E+ G + + L G
Sbjct: 95 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPG 148
Query: 162 KFGSF-----PESVIR-----MYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLA 211
S+ PE + ++ Q+ G+ +L +HRD+ N+L+ N K+
Sbjct: 149 LEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 208
Query: 212 DFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
DFG ++ ++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 60 DAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVL----IAANSASKEKTQAHIRX 115
D R+ +++G G FG+V + + +A+K V +A + + H+R
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 116 XXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLL--GKFGSFPESVIRM 173
N++ L + + + E + ++ L+ KF F ++R
Sbjct: 153 QDKDNTM-------NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK 204
Query: 174 YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKG--CIKLADFGASKKVVELATINGAKSM 231
+ +L L+ LHKN I+H D+K NIL+ +G IK+ DFG+S E +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQS 262
Query: 232 KGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKP 269
+ ++ APEVIL + D+WS+GC + E+ TG P
Sbjct: 263 R---FYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 303 DFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
DFL +CL+ +P +R T + L+HP++ + P
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 49/239 (20%)
Query: 130 NIVRYLGTAREDDSLN--ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHK 187
NI++ + T ++ S ++ E++ L F IR Y +LL L+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD---IRFYMYELLKALDYCHS 155
Query: 188 NGIMHRDIKGANILVDN-KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQT 246
GIMHRD+K N+++D+ + ++L D+G ++ N + + Y+ PE+++
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR---YFKGPELLVDY 212
Query: 247 G-HSFSADIWSVGCTVIEMATGKPPWSQ------QFQEVAALFHIGT-------TKSHPP 292
+ +S D+WS+GC + M + P+ Q +A + +GT K H
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV--LGTEELYGYLKKYHID 270
Query: 293 IPEHL------------------------SMEAKDFLLKCLQKEPYLRSTASELLQHPF 327
+ H S EA D L K L+ + R TA E ++HP+
Sbjct: 271 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 27 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 76
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 77 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ +D+WS G + E+ T G+ P+ EV G P++ E +
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEELYQLM 251
Query: 306 LKCLQKEP-------YLRSTASELLQHPFVTGKYQDPHP 337
C ++ P YLRS + G+YQ P P
Sbjct: 252 RLCWKERPEDRPTFDYLRSVLEDFFTA--TEGQYQ-PQP 287
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 46/241 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD-PHPVFRNSVMES 346
+S EA DFL K L+ + R TA E ++HP+ ++ P N+V+ S
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQPCADNAVLSS 343
Query: 347 G 347
G
Sbjct: 344 G 344
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 34/240 (14%)
Query: 53 LPPIEKTDAPPIRWRKGELVGCGAFGRVY----MGMNLDSGEL-LAVKQVLIAANSASKE 107
LP EK + P + G+ +G GAFG+V G+ + L +AVK + A++ KE
Sbjct: 20 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
Query: 108 KTQAHIRXXXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF---- 163
+ ++ H NIV LG + ++ E+ G + + L +
Sbjct: 80 ALMSELKIMSHLG------QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM 133
Query: 164 -------GSFPESV------------IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDN 204
G PE + + ++ Q+ G+ +L +HRD+ N+L+ N
Sbjct: 134 LGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 193
Query: 205 KGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEM 264
K+ DFG ++ ++ + + + WMAPE I ++ +D+WS G + E+
Sbjct: 194 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 25 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 74
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 75 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ +D+WS G + E+ T G+ P+ EV G P++ E +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEELYQLM 249
Query: 306 LKCLQKEP-------YLRSTASELLQHPFVTGKYQDPHP 337
C ++ P YLRS + G+YQ P P
Sbjct: 250 RLCWKERPEDRPTFDYLRSVLEDFFTA--TEGQYQ-PQP 285
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 28/216 (12%)
Query: 72 VGCGAFGRVYMGMNLDSGEL--LAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
VG G +G VY D + A+KQ+ S S + A +R HP
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLREL----------KHP 78
Query: 130 NIV--RYLGTAREDDSLNILLEF--------VPGGSISSLLGKFGSFPESVIRMYTKQLL 179
N++ + + + D + +L ++ + S K P +++ Q+L
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 180 LGLEYLHKNGIMHRDIKGANILV----DNKGCIKLADFGASKKV-VELATINGAKSMKGT 234
G+ YLH N ++HRD+K ANILV +G +K+AD G ++ L + + T
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 235 PYWMAPEVILQTGHSFSA-DIWSVGCTVIEMATGKP 269
++ APE++L H A DIW++GC E+ T +P
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 29 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 78
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 79 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQFQ-EVAALFHIGTTKSHPPIPEHLSMEAKDFL 305
+ +D+WS G + E+ T G+ P+ EV G P++ E +
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEELYQLM 253
Query: 306 LKCLQKEP-------YLRSTASELLQHPFVTGKYQDPHP 337
C ++ P YLRS + G+YQ P P
Sbjct: 254 RLCWKERPEDRPTFDYLRSVLEDFFTA--TEGQYQ-PQP 289
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPY---WMAPEV 242
+HRD+ N LV+++G +K++DFG S+ V++ + S +G+ + W PEV
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSRGSKFPVRWSPPEV 177
Query: 243 ILQTGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
++ + S +DIW+ G + E+ + GK P+ +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQFQ-EVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ EV G P PE L
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QL 242
Query: 305 LLKCLQKEP-------YLRSTASELLQHPFVTGKYQDPHP 337
+ C ++ P YLRS + G+YQ P P
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVLEDFFTA--TEGQYQ-PQP 279
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+L+D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 41/260 (15%)
Query: 59 TDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXX 118
TD PI + +G G FG V+ N A+K++ + ++EK ++
Sbjct: 5 TDFEPI-----QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 59
Query: 119 XXXXXXXXTHPNIVRYLGTAREDDS------------LNILLEFVPGGSISSLLGKFGSF 166
HP IVRY E ++ L I ++ ++ + +
Sbjct: 60 LE-------HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 167 PE---SVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFG---ASKKVV 220
E SV Q+ +E+LH G+MHRD+K +NI +K+ DFG A +
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 221 ELATI-------NGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
E T+ GT +M+PE I +S DI+S+G + E+ P+S
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229
Query: 274 QFQEVAALFHIGTTKSHPPI 293
Q + V L + K PP+
Sbjct: 230 QMERVRTLTDVRNLK-FPPL 248
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 25 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 74
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 75 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSPPEVLMY 175
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 44/282 (15%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+ + G + A+K+ + E+ H
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN-----ALREVYAHAVLGQHS 67
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK----FGSFPESVIRMYTKQLLLGLEYL 185
++VRY EDD + I E+ GGS++ + + F E+ ++ Q+ GL Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 186 HKNGIMHRDIKGANILV-------------------DNKGCIKLADFGASKKVVELATIN 226
H ++H DIK +NI + NK K+ D G + I+
Sbjct: 128 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRIS 181
Query: 227 GAKSMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKP-PWS-QQFQEVAALFH 283
+ +G ++A EV+ + H ADI+++ TV+ A +P P + Q+ E+
Sbjct: 182 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEI----- 236
Query: 284 IGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P IP+ LS E + L + +P R +A L++H
Sbjct: 237 --RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 24 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 73
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 74 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 28 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 77
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 78 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSPPEVLMY 179
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 14 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 63
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 64 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 21 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 70
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 71 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSPPEVLMY 180
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS-KFPVRWSPPEVLMY 195
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSPPEVLMY 195
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 110 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 167 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 282
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 283 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 109 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 165
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 166 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 222 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 281
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 282 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 328
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 24/281 (8%)
Query: 56 IEKTDAPPIRWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRX 115
+++ D P + GEL+G G FG+VY G GE+ A++ LI ++++ +A R
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEV-AIR--LIDIERDNEDQLKAFKRE 79
Query: 116 XXXXXXXXXXXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPE-SVIRMY 174
H N+V ++G L I+ G ++ S++ + + R
Sbjct: 80 VMAYRQT----RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQI 135
Query: 175 TKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGT 234
++++ G+ YLH GI+H+D+K N+ DN G + + DFG L ++
Sbjct: 136 AQEIVKGMGYLHAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 235 PYW---MAPEVILQTG---------HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALF 282
W +APE+I Q S +D++++G E+ + P+ Q E A ++
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-AIIW 253
Query: 283 HIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELL 323
+GT + E D LL C E R T ++L+
Sbjct: 254 QMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 20 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 69
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 70 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+MG + +AVK + + S +A++ H
Sbjct: 19 ERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E + K W APE I
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPW 271
+ +D+WS G + E+ T G+ P+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD------FLMEALIISKFN 106
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 284
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 285 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 321
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 92
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 270
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 307
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 127 THPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF-GSFPESVIRMYTKQLLLGLEYL 185
+H +V+ G + + I+ E++ G + + L + F + K + +EYL
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 186 HKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQ 245
+HRD+ N LV+++G +K++DFG S+ V++ + S K W PEV++
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVRWSPPEVLMY 186
Query: 246 TGHSFSADIWSVGCTVIEMAT-GKPPWSQ 273
+ S +DIW+ G + E+ + GK P+ +
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKLN 92
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 270
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 307
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKLN 106
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 284
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 285 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 321
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 110 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 167 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 282
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 283 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+ + G + A+K+ + E+ H
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN-----ALREVYAHAVLGQHS 69
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK----FGSFPESVIRMYTKQLLLGLEYL 185
++VRY EDD + I E+ GGS++ + + F E+ ++ Q+ GL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 186 HKNGIMHRDIKGANILV-------------------DNKGCIKLADFGASKKVVELATIN 226
H ++H DIK +NI + NK K+ D G + I+
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRIS 183
Query: 227 GAKSMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIG 285
+ +G ++A EV+ + H ADI+++ TV+ A G P + + +H
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ----WHEI 238
Query: 286 TTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P IP+ LS E + L + +P R +A L++H
Sbjct: 239 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 83
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 84 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 144 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 261
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 262 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 298
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 111 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 168 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 91
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 92 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 269
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 270 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 306
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+ + G + A+K+ + E+ H
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN-----ALREVYAHAVLGQHS 69
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK----FGSFPESVIRMYTKQLLLGLEYL 185
++VRY EDD + I E+ GGS++ + + F E+ ++ Q+ GL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 186 HKNGIMHRDIKGANILV-------------------DNKGCIKLADFGASKKVVELATIN 226
H ++H DIK +NI + NK K+ D G + I+
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRIS 183
Query: 227 GAKSMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIG 285
+ +G ++A EV+ + H ADI+++ TV+ A G P + + +H
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ----WHEI 238
Query: 286 TTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P IP+ LS E + L + +P R +A L++H
Sbjct: 239 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 146 ILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNK 205
++ E V L + + + IR Y ++L L+Y H GIMHRD+K N+++D++
Sbjct: 116 LVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 206 G-CIKLADFGASKKVVELATINGAKSMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVI 262
++L D+G + E +++ + Y+ PE+++ + +S D+WS+GC +
Sbjct: 173 HRKLRLIDWG----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 228
Query: 263 EMATGKPPWSQQFQEVAALFHI----GTTKSHPPIPEH---------------------- 296
M K P+ L I GT + I ++
Sbjct: 229 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 288
Query: 297 ---------LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQD 334
+S EA DFL K L+ + R TA E ++HP+ +D
Sbjct: 289 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 335
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 108
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 109 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 169 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 286
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 287 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 323
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G G V+MG + +AVK + + S +A++ H
Sbjct: 19 ERLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANL---------MKQLQHQ 68
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMY--TKQLLLGLEYLHK 187
+VR ++ + I+ E++ GS+ L ++ ++ Q+ G+ ++ +
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 188 NGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTG 247
+HRD++ ANILV + K+ADFG + +++E A + K W APE I
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 248 HSFSADIWSVGCTVIEMAT-GKPPWSQQFQ-EVAALFHIGTTKSHPP-IPEHLSMEAKDF 304
+ +D+WS G + E+ T G+ P+ EV G P PE L
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QL 242
Query: 305 LLKCLQKEP-------YLRSTASELLQHPFVTGKYQDPHP 337
+ C ++ P YLRS + G+YQ P P
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVLEDFFTA--TEGQYQ-PQP 279
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
E +G G FG V+ + G + A+K+ + E+ H
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN-----ALREVYAHAVLGQHS 71
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGK----FGSFPESVIRMYTKQLLLGLEYL 185
++VRY EDD + I E+ GGS++ + + F E+ ++ Q+ GL Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 186 HKNGIMHRDIKGANILV-------------------DNKGCIKLADFGASKKVVELATIN 226
H ++H DIK +NI + NK K+ D G + I+
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRIS 185
Query: 227 GAKSMKGTPYWMAPEVILQT-GHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIG 285
+ +G ++A EV+ + H ADI+++ TV+ A G P + + +H
Sbjct: 186 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ----WHEI 240
Query: 286 TTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQH 325
P IP+ LS E + L + +P R +A L++H
Sbjct: 241 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 98
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 99 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 159 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 276
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 277 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 313
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 118
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 119 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 179 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 296
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 297 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 333
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 17/228 (7%)
Query: 65 RWRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXX 124
R+R+ +G G +G VY ++ + E +A+K++ + T IR
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQ- 91
Query: 125 XXTHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEY 184
H NI+ + L+++ E+ + + K VI+ + QL+ G+ +
Sbjct: 92 ---HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 185 LHKNGIMHRDIKGANILV-----DNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMA 239
H +HRD+K N+L+ +K+ DFG ++ I T ++
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG--IPIRQFTHEIITLWYRP 205
Query: 240 PEVILQTGH-SFSADIWSVGCTVIEMATGKP--PWSQQFQEVAALFHI 284
PE++L + H S S DIWS+ C EM P P + ++ +F +
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 42/202 (20%)
Query: 171 IRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKG-CIKLADFGASKKVVELATINGAK 229
IR Y ++L L+Y H GIMHRD+K N+++D++ ++L D+G + E
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG----LAEFYHPGQEY 188
Query: 230 SMK-GTPYWMAPEVILQTG-HSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHI--- 284
+++ + Y+ PE+++ + +S D+WS+GC + M K P+ L I
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 285 -GTTKSHPPIPEH-------------------------------LSMEAKDFLLKCLQKE 312
GT + I ++ +S EA DFL K L+ +
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 313 PYLRSTASELLQHPFVTGKYQD 334
R TA E ++HP+ +D
Sbjct: 309 HQSRLTAREAMEHPYFYTVVKD 330
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 92
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 270
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 307
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 104/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 109
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 110 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + W
Sbjct: 170 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 287
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 288 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 324
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 104/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 132
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + ILLE + GG + S L + P + LL
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + W
Sbjct: 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 310
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 311 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 347
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 30/284 (10%)
Query: 72 VGCGAFGRVYMGMNLD--SGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXTHP 129
+G G+FG VY G D GE V SAS + I H
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS---LRERIEFLNEASVMKGFTCH- 80
Query: 130 NIVRYLGTAREDDSLNILLEFVPGGSISSLLGKF--------GSFPESVIRM--YTKQLL 179
++VR LG + +++E + G + S L G P ++ M ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 180 LGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATI-NGAKSMKGTPYWM 238
G+ YL+ +HRD+ N +V + +K+ DFG ++ + E A G K + WM
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV-RWM 199
Query: 239 APEVILQTGHSFSADIWSVGCTVIEMAT--GKPPWSQQFQEVAALFHIGTTKSHPP-IPE 295
APE + + S+D+WS G + E+ + +P ++V G P PE
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 296 HLSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDPHPVF 339
++ D + C Q P +R T E+ V D HP F
Sbjct: 260 RVT----DLMRMCWQFNPKMRPTFLEI-----VNLLKDDLHPSF 294
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 91
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + IL+E + GG + S L + P + LL
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 269
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 270 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 306
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 70 ELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKE-KTQAHIRXXXXXXXXXXXXTH 128
EL+G G FG+V+ + G+ +K+V A +E K A + H
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKL-------------DH 63
Query: 129 PNIVRYLG----------TAREDDS------LNILLEFVPGGSISSLLGKF-GSFPESVI 171
NIV Y G T+ ++ S L I +EF G++ + K G + V+
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 172 RM-YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKS 230
+ +Q+ G++Y+H +++RD+K +NI + + +K+ DFG V L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGKRXR 180
Query: 231 MKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSH 290
KGT +M+PE I + D++++G + E+ F E + F T
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAF-ETSKFF---TDLRD 233
Query: 291 PPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
I + + K L K L K+P R SE+L+
Sbjct: 234 GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 25/279 (8%)
Query: 72 VGCGAFGRVY----MGMNLDSGELLAVKQVLIAANSASKEKTQAHIRXXXXXXXXXXXXT 127
+G GAFG VY GM D L + L S E
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD------FLMEALIISKFN 106
Query: 128 HPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLL-------L 180
H NIVR +G + + IL+E + GG + S L + P + LL
Sbjct: 107 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 181 GLEYLHKNGIMHRDIKGANILVDNKG---CIKLADFGASKKVVELATINGAKSMKGTPYW 237
G +YL +N +HRDI N L+ G K+ DFG ++ + + W
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 238 MAPEVILQTGHSFSADIWSVGCTVIEM-ATGKPPWSQQFQEVAALFHIGTTKSHPPIPEH 296
M PE ++ + D WS G + E+ + G P+ + + F + P P++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKN 284
Query: 297 LSMEAKDFLLKCLQKEPYLRSTASELLQHPFVTGKYQDP 335
+ +C Q +P R + +L+ + QDP
Sbjct: 285 CPGPVYRIMTQCWQHQPEDRPNFAIILER--IEYCTQDP 321
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 55/291 (18%)
Query: 66 WRKGELVGCGAFGRVYMGMNLDSGELLAVKQVLIAANSASKE-KTQAHIRXXXXXXXXXX 124
+++ EL+G G FG+V+ + G+ +++V A +E K A +
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKL----------- 62
Query: 125 XXTHPNIVRYLGT--------AREDDSLN---------------------ILLEFVPGGS 155
H NIV Y G DDSL I +EF G+
Sbjct: 63 --DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 156 ISSLLGKF-GSFPESVIRM-YTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADF 213
+ + K G + V+ + +Q+ G++Y+H ++HRD+K +NI + + +K+ DF
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 214 GASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQ 273
G V L KGT +M+PE I + D++++G + E+
Sbjct: 181 GL---VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDT 234
Query: 274 QFQEVAALFHIGTTKSHPPIPEHLSMEAKDFLLKCLQKEPYLRSTASELLQ 324
F E + F T I + + K L K L K+P R SE+L+
Sbjct: 235 AF-ETSKFF---TDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,688,861
Number of Sequences: 62578
Number of extensions: 596473
Number of successful extensions: 4717
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1216
Number of HSP's gapped (non-prelim): 1269
length of query: 668
length of database: 14,973,337
effective HSP length: 105
effective length of query: 563
effective length of database: 8,402,647
effective search space: 4730690261
effective search space used: 4730690261
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)