Your job contains 1 sequence.
>005949
MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK
FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH
KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL
GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV
STNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC
SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMM
NYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP
ISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH
NEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKY
VFEPNKKT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005949
(668 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 3123 0. 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 3006 2.1e-313 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 2984 4.6e-311 1
TAIR|locus:2015489 - symbol:NRS/ER "nucleotide-rhamnose s... 1223 1.9e-124 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 569 2.1e-86 2
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 697 1.9e-83 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 835 2.4e-83 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 827 1.7e-82 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 817 2.0e-81 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 816 2.5e-81 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 812 6.6e-81 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 812 6.6e-81 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 801 9.7e-80 1
UNIPROTKB|G4MPV2 - symbol:MGG_09238 "Uncharacterized prot... 720 2.5e-73 2
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 684 2.4e-67 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 667 1.5e-65 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 652 6.0e-64 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 629 1.6e-61 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 625 4.3e-61 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 622 9.0e-61 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 620 1.5e-60 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 620 1.5e-60 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 617 3.1e-60 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 616 3.9e-60 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 611 1.3e-59 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 606 4.5e-59 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 605 5.7e-59 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 407 5.8e-59 2
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 603 9.3e-59 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 601 1.5e-58 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 574 1.1e-55 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 574 1.1e-55 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 569 3.7e-55 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 568 4.8e-55 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 565 9.9e-55 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 549 4.9e-53 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 544 1.7e-52 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 544 1.7e-52 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 529 6.5e-51 1
DICTYBASE|DDB_G0274991 - symbol:DDB_G0274991 "NAD-depende... 482 6.2e-46 1
POMBASE|SPBPB2B2.11 - symbol:SPBPB2B2.11 "nucleotide-suga... 424 2.1e-39 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 376 4.6e-34 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 332 3.0e-29 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 302 5.4e-26 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 301 6.9e-26 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 301 6.9e-26 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 305 1.8e-25 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 295 3.1e-25 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 295 3.1e-25 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 302 5.4e-25 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 301 7.6e-25 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 301 7.6e-25 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 301 7.6e-25 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 301 7.6e-25 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 267 8.8e-25 2
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 295 4.4e-24 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 292 1.4e-23 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 279 1.7e-23 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 279 1.7e-23 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 279 1.7e-23 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 277 2.7e-23 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 277 2.7e-23 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 273 7.4e-23 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 280 8.5e-22 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 251 1.8e-20 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 252 2.7e-20 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 252 2.7e-20 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 232 2.8e-20 2
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 241 2.9e-20 2
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 248 3.7e-20 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 245 7.8e-20 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 245 5.5e-19 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 245 5.5e-19 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 195 8.7e-19 2
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 209 1.7e-18 2
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 237 6.8e-18 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 237 6.8e-18 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 243 1.8e-17 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 234 1.9e-17 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 235 2.3e-17 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 240 3.1e-17 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 239 3.6e-17 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 226 9.6e-17 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 223 6.4e-16 1
TIGR_CMR|BA_3248 - symbol:BA_3248 "3-beta hydroxysteroid ... 205 1.3e-15 2
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 219 1.4e-15 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 218 2.0e-15 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 218 2.0e-15 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 221 4.1e-15 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 150 4.7e-15 2
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 213 1.1e-14 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 217 1.1e-14 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 211 1.8e-14 1
TIGR_CMR|CJE_1611 - symbol:CJE_1611 "GDP-mannose 4,6-dehy... 211 2.0e-14 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 215 2.2e-14 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 208 4.2e-14 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 208 4.2e-14 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 211 5.2e-14 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 207 7.1e-14 2
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 182 9.3e-14 3
WARNING: Descriptions of 166 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 3123 (1104.4 bits), Expect = 0., P = 0.
Identities = 584/669 (87%), Positives = 621/669 (92%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+YTPKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL PSK S NFK
Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRV DVAKDICKLF+MDPE +IKFV+NRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT WEEGL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++
Sbjct: 301 GWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL 360
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLED 419
S Q+ MVVP + + +P+KPS+KFLIYG+TGWI I +EYGKGRLED
Sbjct: 361 SEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLED 420
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+ D+QSVKPTHVFN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCR+HG+LM
Sbjct: 421 RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM 480
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 481 MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVS
Sbjct: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVS 600
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 601 HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 660
Query: 660 YVFEPNKKT 668
Y + PNKKT
Sbjct: 661 YAYGPNKKT 669
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 3006 (1063.2 bits), Expect = 2.1e-313, P = 2.1e-313
Identities = 562/668 (84%), Positives = 605/668 (90%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATY PKNILITGAAGFIASHV NRL+R+YP+YKIVVLDKLDYCSNLKNL PSK+S NFK
Sbjct: 1 MATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN+LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEV HVYN+GT +ERRVIDVA DI KLF +DP+++I++VENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GW ERT WEEGLRKT+EWYT+NP+WWGDVSGALLPHPRMLMMPG RH DGS+E+K
Sbjct: 301 GWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGN 360
Query: 361 STNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDC 420
T + V P S K S+KFLIYG+TGW+ IP+EYGKGRLED
Sbjct: 361 QTFTV----VTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDR 416
Query: 421 SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMM 480
+SLIAD++S+KP+HVFNAAG+TGRPNVDWCESHKT+TIR NVAGTLTLADVCR++ +LMM
Sbjct: 417 ASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMM 476
Query: 481 NYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540
N+ATGCIFEYDAAHPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+E+DNVCTLRVRMP
Sbjct: 477 NFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMP 536
Query: 541 ISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH 600
ISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSH
Sbjct: 537 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSH 596
Query: 601 NEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKY 660
NEILEMYK YI P+FKW NF LEEQAKVIVAPRSNNEMD +KL KEFPE+LSIKDSLIKY
Sbjct: 597 NEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKY 656
Query: 661 VFEPNKKT 668
VFEPNK+T
Sbjct: 657 VFEPNKRT 664
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 2984 (1055.5 bits), Expect = 4.6e-311, P = 4.6e-311
Identities = 560/666 (84%), Positives = 603/666 (90%)
Query: 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
TY PKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCS+LKNL PS +S NFKFV
Sbjct: 5 TYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFV 64
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
KGDIAS DLVN+LLITE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG
Sbjct: 65 KGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 124
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
QIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI
Sbjct: 125 QIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 184
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
TTRGNNVYGPNQFPEK+IPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LHKG
Sbjct: 185 TTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 244
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGW 302
E+GHVYNVGTK+ERRVIDVA+DICKLF DPE+SI+FVENRPFNDQRYFLDDQKL LGW
Sbjct: 245 EIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGW 304
Query: 303 SERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVST 362
ERT WE+GL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGR DGS E K VSS
Sbjct: 305 QERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS--- 361
Query: 363 NNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDCSS 422
N +Q+ VV S K S+KFLIYG+TGW+ I +EYGKGRLED +S
Sbjct: 362 NTVQTFTVVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRAS 421
Query: 423 LIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNY 482
L+AD++S+KPTHVFNAAG+TGRPNVDWCESHK +TIR NVAGTLTLADVCR++ +LMMN+
Sbjct: 422 LVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNF 481
Query: 483 ATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 542
ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPIS
Sbjct: 482 ATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPIS 541
Query: 543 SDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE 602
SDLNNPRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE
Sbjct: 542 SDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE 601
Query: 603 ILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVF 662
ILEMYK YI P FKW NFT+EEQAKVIVA RSNNEMD SKL KEFPE+LSIK+SL+KYVF
Sbjct: 602 ILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVF 661
Query: 663 EPNKKT 668
EPNK+T
Sbjct: 662 EPNKRT 667
>TAIR|locus:2015489 [details] [associations]
symbol:NRS/ER "nucleotide-rhamnose
synthase/epimerase-reductase" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA;IDA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0008830 "dTDP-4-dehydrorhamnose 3,5-epimerase
activity" evidence=IDA] [GO:0019305 "dTDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 EMBL:AC011000
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0008831
GO:GO:0045226 GO:GO:0010253 GO:GO:0010489 GO:GO:0010490
GO:GO:0019305 GO:GO:0008830 EMBL:AF332445 EMBL:AY513232
IPI:IPI00546034 PIR:B96655 RefSeq:NP_564806.1 UniGene:At.70069
UniGene:At.71603 ProteinModelPortal:Q9LQ04 SMR:Q9LQ04 IntAct:Q9LQ04
STRING:Q9LQ04 PRIDE:Q9LQ04 DNASU:842603 EnsemblPlants:AT1G63000.1
GeneID:842603 KEGG:ath:AT1G63000 TAIR:At1g63000 InParanoid:Q9LQ04
KO:K12451 OMA:GAISHNE PhylomeDB:Q9LQ04 ProtClustDB:PLN02778
BioCyc:ARA:AT1G63000-MONOMER BioCyc:MetaCyc:AT1G63000-MONOMER
BRENDA:1.1.1.133 ArrayExpress:Q9LQ04 Genevestigator:Q9LQ04
Uniprot:Q9LQ04
Length = 301
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 226/296 (76%), Positives = 257/296 (86%)
Query: 373 VSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDCSSLIADVQSVKP 432
V+ + S FLIYG+TGWI I + YG GRL+D S++AD++SVKP
Sbjct: 2 VADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKP 61
Query: 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDA 492
+HVFNAAGVTGRPNVDWCESHK +TIRTNVAGTLTLAD+CR+ G++++NYATGCIFEYD+
Sbjct: 62 SHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDS 121
Query: 493 AHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFI 552
HP GSGIG+KEEDTPNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL NPRNFI
Sbjct: 122 GHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFI 181
Query: 553 TKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYIN 612
TKI+RY KVV+IPNSMT+LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ YI+
Sbjct: 182 TKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYID 241
Query: 613 PEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
P F W NFTLEEQAKVIVAPRSNNE+DA+KLK EFPEL+SIK+SLIK+VFEPNKKT
Sbjct: 242 PSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 569 (205.4 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 124/323 (38%), Positives = 188/323 (58%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFV 62
YTPKN++ITG GFI S+ N + +P V +DKL S+ +N+ S + S +K V
Sbjct: 3 YTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLV 62
Query: 63 KGDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
DI + A ++N E IDT++HFAA + + E +NN+ LE +
Sbjct: 63 LTDIKNEAAILNVFEQNE-IDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 122 GQIRRFIHVSTDEVYGETD-EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
G+I+RF+H+STDEVYG++D + G E S+L+P NPY+ATK E V AY Y LP
Sbjct: 122 GKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLP 181
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLA-MRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
++T R NN+YGPNQ+ K++P+FI +A +RG I G G +RS+L+ +D + + +
Sbjct: 182 IVTARMNNIYGPNQWDVKVVPRFIEIAKVRG-EYTIQGSGKQLRSWLFVDDASAGLKAVC 240
Query: 240 HKGEVGHVYNVGTKKERRVIDVAKDI-----CKLFSMDPETSIKFVENRPFNDQRYFLDD 294
KGE+ +YN+GT E+ V D+AK I +L K + +RP+ND RY +
Sbjct: 241 EKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISI 300
Query: 295 QKLTS-LGWSERTIWEEGLRKTI 316
+K + LGW T +++G+R T+
Sbjct: 301 EKAKNDLGWEPTTSFDDGMRHTV 323
Score = 314 (115.6 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 84/294 (28%), Positives = 143/294 (48%)
Query: 384 MKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRL--EDCSSLIADVQSVKPTHVFNAAGV 441
M IYG G++ IP+ ++ + + ++ + THV G
Sbjct: 335 MHVAIYGGKGYVGQELQHVLNDRHIPYVLATKKVGFDSDEEVERELALLGVTHVICVTGR 394
Query: 442 TGRPNVDWCE--SHKTD----TIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHP 495
T P + E + D +R N+ LA +CR G+ TG +F YD HP
Sbjct: 395 THGPGCNTIEYLEGRADKVFINVRDNMYSATILAHMCRKLGLHYTYIGTGYMFAYDKEHP 454
Query: 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-----DNVCTLRVRMPISSDLNNPRN 550
G G +KEED P F GS YS K + + + +N+ +R+ +P+S DL PRN
Sbjct: 455 IG-GAEFKEEDEPTFFGSAYSVVKGFTDRQMNYFNQNGWENL-NVRITLPLSLDLEQPRN 512
Query: 551 FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKY 610
++KI +Y ++ +IP S+T+L + + + ++ G N NP +S E++++YK+
Sbjct: 513 LLSKIIKYKELFDIPVSLTILPDCMNAMCNLMEQRSGGTLNLVNPEPISLYEVVKIYKEI 572
Query: 611 INPEFKWVNFTLE-EQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFE 663
++ + +E E+A+ ++A + N +D KL+ P +LS K SLIK+ E
Sbjct: 573 VDETVNPTSIGVETERAQHLLATKGNCALDTEKLQSLAP-VLSAKQSLIKHFSE 625
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 697 (250.4 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 142/270 (52%), Positives = 185/270 (68%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ILITG AGFI SH+ L + + KI+VLDKLDYCSN+ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
++L+ + E ID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++++
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 127 FIHVSTDEVYG----ETDED---AV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
FI+VSTDEVYG E ++D ++ ++E S L PTNPYSA+KAGAE LV +Y +S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
LPVI TR NN+YGP Q+PEK+IPKFI L + IHG G N R+YLY +D+ AF+ I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKL 268
L KGE+G+VYN+GT E +DVAK I +
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI 278
Score = 158 (60.7 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 271 MDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPDWW 326
MD + I ++++RPFND RY ++ KL++LGW + WEEG+ KT WY N ++W
Sbjct: 314 MDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 164/337 (48%), Positives = 220/337 (65%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G + +
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLF---SMDPETS--IKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + + ET + +V +RP ND RY + +K+ SL
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + WEEG++KT+EWY +N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 162/337 (48%), Positives = 219/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL P N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ ++ +
Sbjct: 78 CDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-YEARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLF---SMDPETS--IKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + D ET + +V +RP ND RY + +K+ SL
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + WEEG++KT+EWY +N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 161/337 (47%), Positives = 216/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP Y IV LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVLL A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + E + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 159/337 (47%), Positives = 217/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + E + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 158/337 (46%), Positives = 217/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + E + +V++RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 158/337 (46%), Positives = 217/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
++ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y P + TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + ET + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKSEKIQGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTI+WY +N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 157/337 (46%), Positives = 218/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+RNYP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 23 KRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDI 82
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ L TE ID ++HFAAQTHVD SF ++ EFT N+YGT+VL+ A + +
Sbjct: 83 CEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAH-EANVEK 141
Query: 127 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
F++VSTDEVYG TD++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 142 FVYVSTDEVYGGSTDQEF----DESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITR 197
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF +L +G+ G
Sbjct: 198 SSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPG 257
Query: 246 HVYNVGTKKERRVIDVAKDICKLF---SMDPETS--IKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E ++ +AK++ L S + E + +V++RP ND RY + +K+ +L
Sbjct: 258 EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMSSEKMHNL 317
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W + AL P P
Sbjct: 318 GWRPKVPWKEGIKKTIEWYKENFHNWKNAEKALEPFP 354
>UNIPROTKB|G4MPV2 [details] [associations]
symbol:MGG_09238 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CM001231 GO:GO:0008831
GO:GO:0045226 RefSeq:XP_003709861.1 ProteinModelPortal:G4MPV2
EnsemblFungi:MGG_09238T0 GeneID:2680178 KEGG:mgr:MGG_09238
Uniprot:G4MPV2
Length = 292
Score = 720 (258.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 142/287 (49%), Positives = 194/287 (67%)
Query: 385 KFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444
+FLI+G GW+ R+E+ ++A+++ VKPTHV N AG TGR
Sbjct: 5 RFLIWGGEGWVAGHLASILKSQGKDVYTTTVRMENREGVLAELEKVKPTHVLNCAGCTGR 64
Query: 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKE 504
PNVDWCE +K T+R+NV GTL L D C GI +ATGCI++YD AHP G G+ E
Sbjct: 65 PNVDWCEDNKEATMRSNVIGTLNLTDACFQKGIHCTVFATGCIYQYDDAHP-WDGPGFLE 123
Query: 505 EDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI 564
D NF GSFYS+TKA VEE++K Y+N LR+RMP+S DL+ PRNF+TKI++Y++VV+I
Sbjct: 124 TDKANFAGSFYSETKAHVEEVMKYYNNCLILRLRMPVSDDLH-PRNFVTKIAKYDRVVDI 182
Query: 565 PNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEE 624
PNS T+L +LLP+S+ MA+ G++NFTNPG +SHNE+L +++ + P FKW NF+LEE
Sbjct: 183 PNSNTILHDLLPLSLAMAEHKDTGVYNFTNPGAISHNEVLTLFRDIVRPSFKWQNFSLEE 242
Query: 625 QAKVIVAPRSNNEMDASKLK---KEFP-ELLSIKDSLIKYVFEPNKK 667
QAKVI A RSN ++D +KL KE+ E+ I ++ + FE KK
Sbjct: 243 QAKVIKAGRSNCKLDTTKLTEKAKEYGIEVPEIHEAY-RQCFERMKK 288
Score = 39 (18.8 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 5 TPKNILITGAAGFIASHVCNRL 26
T LI G G++A H+ + L
Sbjct: 2 TNNRFLIWGGEGWVAGHLASIL 23
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 133/329 (40%), Positives = 203/329 (61%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ +L+TG AGFI SH+ L +P ++I+ +D L YCSNLKNL +ASS++ F+ GD+
Sbjct: 7 RTVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDV 66
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ L TE ID + H AA+THV+NSF F + N+ GT VL+ A + ++R
Sbjct: 67 CDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRA-SLEASVQR 125
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FI++STDEVYG++ + E S PTNPYS +KA AE +V +Y + P + TR
Sbjct: 126 FIYISTDEVYGDSVDQPF---DELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRS 182
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+NVYGP Q EK+IP+F+ L + I G G R +LY DV +AF ++ KG +G
Sbjct: 183 SNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILGE 242
Query: 247 VYNVGTKKERRVIDVAKDICKLF--SMDPETS---IKFVENRPFNDQRYFLDDQKLTSLG 301
+YN+GT E +I +A+++ ++ S+ E+ ++FVE+RP + RY ++ KL LG
Sbjct: 243 IYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHRLG 302
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVS 330
W + W EG+R+T++WY +NP++W +S
Sbjct: 303 WRPKVAWTEGIRRTVQWYEENPNYWPIIS 331
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 145/344 (42%), Positives = 205/344 (59%)
Query: 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
T++P +L+TG AGFI S+ N + P +++ LD L Y NL+NL + + ++FV
Sbjct: 4 TFSPSAVLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFV 63
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--- 119
KGDI ADLV +L E ID ++HFAA++HVD S F + N+ GT VLLE +
Sbjct: 64 KGDIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHW 123
Query: 120 VTGQIRRF--IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
+G I RF +HVSTDEVYG E E + L P +PYSA+KAG+++LV AY ++
Sbjct: 124 ESGAIERFRFLHVSTDEVYGTLGETGYFT--EETPLAPNSPYSASKAGSDLLVRAYNETF 181
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
GLPV+TTR +N YGP QFPEKLIP I + G PLP++GDG NVR +L+ +D + A E
Sbjct: 182 GLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIET 241
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM-------DPETSIKFVENRPFNDQRY 290
+L G+ G V+NVG E ID+ +C L + I FV++R +D+RY
Sbjct: 242 VLKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRY 301
Query: 291 FLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+ K+ LGW +E G+ +T++WY N W +V SG+
Sbjct: 302 AISAAKIKRELGWEPSYTFERGIAETVDWYLANRAWVDEVTSGS 345
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 128/321 (39%), Positives = 198/321 (61%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
NIL+TG AGFI S+ + ++++Y YKI+ D L Y NL N+ + N+ FVKG+I
Sbjct: 2 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQ 61
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ +L+ ++ + I++FAA++HVD S N F N+ GT LLE K I+
Sbjct: 62 NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK-L 120
Query: 128 IHVSTDEVYGETDEDAVVGNH-EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ VSTDEVYG + G E + L P +PYS++KA A+M+ +AY ++Y LPVI TR
Sbjct: 121 VQVSTDEVYGSLGK---TGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRC 177
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+N YGP Q+PEKLIP + A+ G LP++GDG NVR +L+ D A + +LHKG VG
Sbjct: 178 SNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGE 237
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER 305
VYN+G E+ ++V + I L + I++V +R +D+RY ++ +K+ + W +
Sbjct: 238 VYNIGGNNEKTNVEVVEQIITLLGKTKK-DIEYVTDRLGHDRRYAINAEKMKNEFDWEPK 296
Query: 306 TIWEEGLRKTIEWYTQNPDWW 326
+E+GL++T++WY +N +WW
Sbjct: 297 YTFEQGLQETVQWYEKNEEWW 317
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 128/316 (40%), Positives = 194/316 (61%)
Query: 9 ILITGAAGFIASHVCNRLIRNYP-EYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
IL+TG AGFI S +R Y +++++++DKL Y +L+ + + KF K D+A
Sbjct: 3 ILVTGGAGFIGS----AFVRKYAYDHELIIVDKLTYAGDLRRI--EEVRDRIKFYKADVA 56
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + E + ++HFAA++HVD S + F + N+ GT V+L+A + G I +F
Sbjct: 57 DKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYG-IEKF 115
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
+H+STDEVYGE ++ E S L P +PYS +KA A+ML AY R+YGLPVI R
Sbjct: 116 VHISTDEVYGELGKEGQFT--EESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPC 173
Query: 188 NVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV 247
N YGP Q+PEKLIP I A+ P+P++G G NVR +LY +D EA +L KG+ G
Sbjct: 174 NNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKPGEA 233
Query: 248 YNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERT 306
YN+G+ +E+ I+V K+I ++ PE+ I FVE+RP +D RY L+ +K+ + W +
Sbjct: 234 YNIGSGEEKGNIEVVKEILRILGK-PESLITFVEDRPGHDFRYSLNSKKIKMNYAWKHKV 292
Query: 307 IWEEGLRKTIEWYTQN 322
+ EG+R I+WY ++
Sbjct: 293 NFNEGIRFVIDWYKKH 308
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 145/346 (41%), Positives = 197/346 (56%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 67 AS-ADLVNFLLITE-SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----- 119
A+L + TE D +MH AA++HVD S F + NI GT+ LLEA +
Sbjct: 61 CDRAELAR--VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNA 118
Query: 120 VTGQIR---RFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
+T + RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+
Sbjct: 119 LTEDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWL 175
Query: 175 RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R+YGLP + T +N YGP FPEKLIP IL A+ G LP++G+G +R +LY ED A A
Sbjct: 176 RTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARA 235
Query: 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDPETS---------IKFVENRP 284
C+ G+VG YN+G ER+ +DV + IC+L + P I FV +RP
Sbjct: 236 LYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRP 295
Query: 285 FNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV 329
+D RY +D K+ LGW + +E G+RKT++WY N WW V
Sbjct: 296 GHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 130/324 (40%), Positives = 188/324 (58%)
Query: 9 ILITGAAGFIASHVCNRLIRN-----YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
IL+TG AGFI SH LI P ++ V+DKL Y NL+NL + A F FV+
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVR 62
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI L+ L+ DT+ HFAA+THVD S S F +N+ GT VLL+A +
Sbjct: 63 GDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAA-LRHH 119
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
I RF+HVSTDEVYG D + H L P +PY+A+KAG+++L +AY +++G+ V+
Sbjct: 120 IGRFLHVSTDEVYGSIDTGSWAEGHP---LAPNSPYAASKAGSDLLALAYHQTHGMDVVV 176
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
TR +N YGP QFPEK+IP F+ + GL +P++GDG N+R +L+ D L G
Sbjct: 177 TRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGR 236
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGW 302
G VY++G E +++ + + + P + I FV +R +D+RY LD K+ LG+
Sbjct: 237 AGEVYHIGGGWEATNLELTEILLEACGA-PASRISFVTDRKGHDRRYSLDYSKIAGELGY 295
Query: 303 SERTIWEEGLRKTIEWYTQNPDWW 326
R + +G+ +T+ WY N WW
Sbjct: 296 RPRVDFTDGIAETVAWYRANRSWW 319
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 141/346 (40%), Positives = 197/346 (56%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----VTGQ 123
A ++ + D +MH AA++HVD S F + NI GT+VLLEA + + +
Sbjct: 62 AVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDE 121
Query: 124 IR---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 173
+ RF H+STDEVYG+ N+EA L P++PYSA+KA ++ LV A+
Sbjct: 122 KKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R+YGLP I T +N YGP FPEKLIP IL A+ G LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS--MDPETS----IKFVENRPFND 287
A ++ +G+ G YN+G E++ IDV IC L + E S I +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 288 QRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SG 331
+RY +D K++ LGW + +E G+RKT+EWY N +W +V SG
Sbjct: 302 RRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSG 347
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 141/347 (40%), Positives = 198/347 (57%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----VTGQ 123
A+ +D +MH AA++HVD S F + NI GT+VLLEA + + +
Sbjct: 62 AEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDE 121
Query: 124 IR---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 173
+ RF H+STDEVYG+ V ++E QL P++PYSA+KA ++ LV A+
Sbjct: 122 KKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R+YGLP I + +N YGP FPEKLIP IL A+ G LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS--MDPETS----IKFVENRPFND 287
A ++ +G+ G YN+G E++ IDV IC L + E S I +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 288 QRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+RY +D K++ LGW + +E G+RKT+EWY N +W +V SGA
Sbjct: 302 RRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGA 348
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 141/344 (40%), Positives = 196/344 (56%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ IL+TG AGFI S V +IRN + +V +DKL Y NL++L + + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR- 125
++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 126 -------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
RF H+STDEVYG+ +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFT---ETAPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
YGLP I T +N YGP FPEKLIP IL A+ G PLP++GDG +R +L+ ED A A
Sbjct: 178 YGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDPETS---------IKFVENRPFN 286
++ +G VG YN+G E+ I+V K IC L + PE I FV++RP +
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 287 DQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV 329
D RY +D K+ LGW +E GLRKT++WY N WW +V
Sbjct: 298 DVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 141/347 (40%), Positives = 197/347 (56%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILITG AGFI S V +I+N + +V +DKL Y NL++L S+ + F DI
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQI 124
+ + + D +MH AA++HVD S F + NI GT+ LLE + G+
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121
Query: 125 R----RFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAY 173
+ RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A+
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R+YGLP I T +N YGP FPEKLIP IL A+ G PLPI+G G +R +LY ED A
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241
Query: 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDPE-TS----IKFVENRPFND 287
A ++ +G+ G YN+G E++ +DV IC L + P+ TS I +V +RP +D
Sbjct: 242 ALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHD 301
Query: 288 QRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+RY +D K++ LGW +E G+RKT+EWY N W +V SGA
Sbjct: 302 RRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGA 348
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 141/347 (40%), Positives = 194/347 (55%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S V +I N + +V +DKL Y N ++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----VTGQ 123
A + + D +MH AA++HVD S F + NI GT+VLLEA + +
Sbjct: 62 APAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSD 121
Query: 124 IR---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 173
+ RF H+STDEVYG+ V N E L P++PYSA+KA ++ LV A+
Sbjct: 122 KKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R+YGLP I T +N YGP FPEKLIP IL A+ G LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS--MDPETS----IKFVENRPFND 287
A ++ +G+ G YN+G E++ IDV IC L + E S I +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 288 QRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+RY +D +K+ +LGW + +E G+RKT+EWY N W +V SGA
Sbjct: 302 RRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGA 348
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 139/337 (41%), Positives = 192/337 (56%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ IL+TG AGFI S V +IRN + +V LDKL Y NL++L + + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR- 125
++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 126 -------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
RF H+STDEVYG+ +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFT---ETAPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
YGLP I T +N YGP FPEKLIP IL A+ G PLP++GDG +R +L+ ED A A
Sbjct: 178 YGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDPETS---------IKFVENRPFN 286
++ +G VG YN+G E+ I+V K IC L + PE I FV++RP +
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 287 DQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQN 322
D RY +D K+ LGW +E GLRKT++WY N
Sbjct: 298 DARYAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 140/343 (40%), Positives = 196/343 (57%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
M T KNIL+TG AGFI S V +I+N + +V LDKL Y NL++L + +
Sbjct: 1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYA 59
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F + DI ++ + D +MH AA++HVD + G++ EF + NI GT LLEA +
Sbjct: 60 FEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARA 119
Query: 121 TGQIR--------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
Q RF H+STDEVYG+ +D E + P++PYSA+KA A+ LV
Sbjct: 120 YWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFT---ETTPYAPSSPYSASKAAADHLV 176
Query: 171 MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230
A+ R+Y LP I + +N YGP QFPEKLIP IL A+ G PLP++GDG+ +R +L+ ED
Sbjct: 177 RAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVED 236
Query: 231 VAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDPETS---------IKFV 280
A A ++ +G VG YN+G E+ ++V K IC L + PE I FV
Sbjct: 237 HARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFV 296
Query: 281 ENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQN 322
++RP +D RY +D K+ LGW +E GLRKT++WY N
Sbjct: 297 QDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 407 (148.3 bits), Expect = 5.8e-59, Sum P(2) = 5.8e-59
Identities = 82/198 (41%), Positives = 121/198 (61%)
Query: 149 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM 208
E + P++PYSA+KA ++ LV A+ R+YG P I T +N YGP FPEKLIP IL A+
Sbjct: 175 ETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNAL 234
Query: 209 RGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKL 268
G PLPI+G G +R +LY ED A A ++ +G+VG YN+G E+R ++V + IC +
Sbjct: 235 EGKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSI 294
Query: 269 F-SMDPETS-----IKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQ 321
S+ P+ + I +V +RP +D+RY +D K+++ L W + +E GLRKT+EWY
Sbjct: 295 LDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTVEWYLA 354
Query: 322 NPDWWGDVSGALLPHPRM 339
N +W V R+
Sbjct: 355 NQEWCQHVQDGTYQRERL 372
Score = 225 (84.3 bits), Expect = 5.8e-59, Sum P(2) = 5.8e-59
Identities = 59/153 (38%), Positives = 80/153 (52%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F K DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDC-VVNVDKLTYAGNLESLTSVADSPRYTFEKVDICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-VTGQIR-- 125
+ + D +MH AA++HVD S S +F + NI GT+ LLEA + Q+
Sbjct: 62 RTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTE 121
Query: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQL 153
RF H+STDEVYG+ + N E S L
Sbjct: 122 RKSAFRFHHISTDEVYGDLPHPDEI-NVECSML 153
Score = 42 (19.8 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 468 LADVCRDHGILMMNYATGCIF 488
L D C+DH L + ++T +F
Sbjct: 153 LNDECKDHSTLNIQHSTLPLF 173
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 142/342 (41%), Positives = 189/342 (55%)
Query: 10 LITGAAGFIASH-VCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
L+TG AGFI + V + R ++V LD L Y NL L + +++ FVKGDI
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGI---RVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQI 124
LV LL D +++FAA++HVD S F + N+ GT LLEA K
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 125 RR----FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
RR F+HVSTDEVYG E E + P +PYSA+KA ++ LV A+ +YGLP
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFT--ETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
V+TT +N YGP FPEKLIP I A+ G PLP++GDG VR +L+ D EA +L
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-P-------ETSIKFVENRPFNDQRYFL 292
KG VG YNVG ER+ I+V + IC L P E+ I +V +RP +D+RY +
Sbjct: 240 KGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAI 299
Query: 293 DDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWGDVSGAL 333
D KL LGW +E+G+ +T++WY N W V G L
Sbjct: 300 DASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTW---VQGVL 338
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 142/342 (41%), Positives = 188/342 (54%)
Query: 10 LITGAAGFIASH-VCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
L+TG AGFI + V + R ++V LD L Y NL L + +++ FVKGDI
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGI---RVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQI 124
LV LL D +++FAA++HVD S F + N+ GT LLEA K
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 125 RR----FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
RR F+HVSTDEVYG E E + P +PYSA+KA ++ LV A+ +YGLP
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFT--ETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
V+TT +N YGP FPEKLIP I A+ G PLP++GDG VR +L+ D EA +L
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-P-------ETSIKFVENRPFNDQRYFL 292
KG VG YNVG ER+ I+V + IC L P E+ I +V +RP +D+RY +
Sbjct: 240 KGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAI 299
Query: 293 DDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWGDVSGAL 333
D KL LGW +E+G+ T++WY N W V G L
Sbjct: 300 DASKLKDELGWEPAYTFEQGIALTVDWYLTNQTW---VQGVL 338
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 123/311 (39%), Positives = 184/311 (59%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K I+++G AGFI H +++ YP + +DKL+Y SN + K+ SNF+FV D+
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDL 66
Query: 67 ASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ D + +LL IT++ I++FAA++ VD SF + FTKNNI T LLE ++ I
Sbjct: 67 S--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
F+H+STDEVYG+ E N E + + PTNPYSA+KA ++++ +Y SY LP+ R
Sbjct: 125 YFLHISTDEVYGDVYEG---DNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-- 243
NNVYGP Q+PEK+IP I P+P+HG G+N R YLY D+ A E + K
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMT 241
Query: 244 -VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGW 302
V +YN+G E + + K I ++F I+F+++R +ND Y +D K+ +LGW
Sbjct: 242 TVNQIYNIGGTDELDNLSLIKLIMEIFGRG---EIQFIKDRNYNDTNYSIDTTKIHNLGW 298
Query: 303 SERTIWEEGLR 313
S + +GL+
Sbjct: 299 SPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 123/311 (39%), Positives = 184/311 (59%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K I+++G AGFI H +++ YP + +DKL+Y SN + K+ SNF+FV D+
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDL 66
Query: 67 ASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ D + +LL IT++ I++FAA++ VD SF + FTKNNI T LLE ++ I
Sbjct: 67 S--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
F+H+STDEVYG+ E N E + + PTNPYSA+KA ++++ +Y SY LP+ R
Sbjct: 125 YFLHISTDEVYGDVYEG---DNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-- 243
NNVYGP Q+PEK+IP I P+P+HG G+N R YLY D+ A E + K
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMT 241
Query: 244 -VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGW 302
V +YN+G E + + K I ++F I+F+++R +ND Y +D K+ +LGW
Sbjct: 242 TVNQIYNIGGTDELDNLSLIKLIMEIFGRG---EIQFIKDRNYNDTNYSIDTTKIHNLGW 298
Query: 303 SERTIWEEGLR 313
S + +GL+
Sbjct: 299 SPKISLVQGLQ 309
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 124/326 (38%), Positives = 188/326 (57%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIPSKASSNFKFVKG 64
P +LITG GFI S+ N + K + DKL + S L + S +KFV+
Sbjct: 8 PTCVLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEA 67
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ- 123
+ + L +D ++HFAA THVD S+ + ++NI T LLE+ +
Sbjct: 68 ALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYK 127
Query: 124 -IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+++ +H+STDEVYG++ ED + AS PTNPY+A+KA EM++ +Y SY LP +
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R NNVYGP Q KLIPKF LA+ G P P+ GDG + RS++Y ED +EA + +G
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVALEG 247
Query: 243 EVGHVYNVGTKKERRVIDVAK----DICKLFSMDPETSIKF--VENRPFNDQRYFLDDQK 296
+G +YN+GT E I++ K + KL + +P T+ F + +RP++D+RY++D K
Sbjct: 248 TLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREP-TAPTFAPIPDRPYHDRRYYIDFSK 306
Query: 297 L-TSLGWSERTIWEEGLRKTIEWYTQ 321
+ ++GW T + EGL KTI++Y +
Sbjct: 307 IRNAMGWQCTTPFSEGLMKTIDYYVK 332
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 133/336 (39%), Positives = 191/336 (56%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
NIL+TG +GFI S + R I N+ + ++ +DKL Y +N L + + + F K DI
Sbjct: 3 NILVTGGSGFIGSALI-RYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQ 123
+++ + D +MH AA++HVD S + +F + NI GT+ LLE K +
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 124 IR----RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
+ RF H+STDEVYG+ E A E S P++PYSA+KA + LV A+ R+Y
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPAFT---EQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
GLPVI T +N YG Q EKLIP I A+ G PLPI+GDG +R +L+ ED +A
Sbjct: 179 GLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYL 238
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS-MDP---------ETSIKFVENRPFND 287
+L KG VG YN+G E+ ++V K IC+L + P E + FV++RP +D
Sbjct: 239 VLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHD 298
Query: 288 QRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWYTQN 322
RY LD K+ LGW + +E+GLR+T++WY N
Sbjct: 299 VRYSLDCSKIHAELGWQPQITFEQGLRQTVKWYLFN 334
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 124/326 (38%), Positives = 188/326 (57%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG AGFI ++ + +R +P+ + VLD L Y ++L + + V+GDI
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESL--ADVEDAIRLVQGDITD 60
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
A+LV+ L+ ES D ++HFAA++HVDN+ N F N+ GT +LEA + G R
Sbjct: 61 AELVS-QLVAES-DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV--RLH 116
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
H+STDEVYG+ + D E++ P++PYSATKAGA+MLV A+ RSYG+ + +N
Sbjct: 117 HISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 189 VYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVY 248
YGP Q EK IP+ I + G ++G G+NVR +++ +D A IL +G +G Y
Sbjct: 177 NYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTY 236
Query: 249 NVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL-TSLGWSER-T 306
+ ++ ER + V + + +L DP+ V +R +D RY +D L L W+ + T
Sbjct: 237 LISSEGERDNLTVLRTLLRLMDRDPD-DFDHVTDRVGHDLRYAIDPSTLYDELCWAPKHT 295
Query: 307 IWEEGLRKTIEWYTQNPDWWGDVSGA 332
+EEGLR TI+WY N WW + A
Sbjct: 296 DFEEGLRTTIDWYRDNESWWRPLKDA 321
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 129/333 (38%), Positives = 187/333 (56%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S + LI E ++ DKL Y S+ ++L + + FV+ DI
Sbjct: 3 ILVTGGAGFIGSALVRMLIEQ-TESVVLNFDKLTYASHPESLAGVADNERYHFVQADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQI 124
+ +L D +MH AA++HVD S EF + NI GT+ LLEAC+ GQ
Sbjct: 62 RARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQA 121
Query: 125 --RRFI--HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
RRF H+STDEV+G E + E S P++PYSA+KA A+ LV A+ R+Y LP
Sbjct: 122 QQRRFRLHHISTDEVFGSLTETGLFS--ETSAYDPSSPYSASKASADHLVRAWHRTYALP 179
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
++ T +N YGP Q+PEKLIP + A++ PLPI+G+G VR +LY +D +A +
Sbjct: 180 IVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALYLVAT 239
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFS----MDPETS----------IKFVENRPFN 286
+G++G YN+G E+ + V + IC L P++ I++V +RP +
Sbjct: 240 QGQLGQTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPGH 299
Query: 287 DQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEW 318
D RY +D K+ LGW + +E GLRKT+EW
Sbjct: 300 DVRYAIDASKIQRELGWRPQESFESGLRKTVEW 332
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 124/320 (38%), Positives = 181/320 (56%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG AGFI ++ + +R I VLD L Y + ++L P + + V+GDI
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAP--VADRIRLVQGDITD 60
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
A LV L + ES D ++HFAA+THVDN+ + F +N+ GT+ +LEA V R
Sbjct: 61 AALVGDL-VAES-DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEA--VRRHNVRLH 116
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
HVSTDEVYG+ + D +E + P++PYS+TKA A++LV A+ RSYG+ + +N
Sbjct: 117 HVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSN 176
Query: 189 VYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVY 248
YGP Q EK IP+ I + G ++G G+NVR +++ +D A IL G +G Y
Sbjct: 177 NYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGRTY 236
Query: 249 NVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER-T 306
+G + ER + V + I KL DP+ V +R +D RY +D L LGW+ + T
Sbjct: 237 LIGAECERNNLTVMRTILKLMGRDPD-DFDHVTDRAGHDLRYAIDPSTLQDELGWAPKHT 295
Query: 307 IWEEGLRKTIEWYTQNPDWW 326
+E GL TI+WY N WW
Sbjct: 296 DFEAGLTDTIDWYRANESWW 315
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 125/331 (37%), Positives = 189/331 (57%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + V GDI
Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL-EEILGDRVELVVGDI 63
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A ++LV+ L D I+H+AA++H DNS + F N GT++LLEA + IR
Sbjct: 64 ADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKY-DIR- 119
Query: 127 FIHVSTDEVYGETD-EDAVVGNHEA--------SQLLPTNPYSATKAGAEMLVMAYGRSY 177
F HVSTDEVYG+ + + G+ E ++ P++PYS+TKA ++++V A+ RS+
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
G+ + +N YGP Q EK IP+ I + G+ ++G+G NVR +++ D +
Sbjct: 180 GVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWA 239
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL 297
IL KG +G Y +G E+ +V + I + S P+ + V +R +D RY +D KL
Sbjct: 240 ILTKGRIGETYLIGADGEKNNKEVLELILEKMSQ-PKNAYDHVTDRAGHDLRYAIDSTKL 298
Query: 298 TS-LGWSER-TIWEEGLRKTIEWYTQNPDWW 326
LGW + T +EEGL TI+WYT++ DWW
Sbjct: 299 REELGWKPQFTNFEEGLEDTIKWYTEHEDWW 329
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 117/325 (36%), Positives = 181/325 (55%)
Query: 8 NILITGAAGFIASHVCNRLIR--NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
++L+TGAAGFI S L+ P+ + LD L Y N NL + ++F +GD
Sbjct: 4 HLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGD 63
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I A + D ++H AA++HVD S ++ F + N++GT LL+A G +
Sbjct: 64 ICDAPGRR---VMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHG-VA 119
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
F+ VSTDEVYG + + E L P +PYSA+KA ++L +A+ S+GL V TR
Sbjct: 120 SFVQVSTDEVYGSLEHGSWT---EDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTR 176
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+N YGP QFPEKLIP+FI L M G +P++GDG NVR +L+ +D E + +G G
Sbjct: 177 CSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAG 236
Query: 246 HVYNVG---TKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
VYN+G T + ++ + + + D S+++VE+R +D+RY +D ++ LG
Sbjct: 237 RVYNIGGGATLSNKELVGL---LLEAAGAD-WGSVEYVEDRKGHDRRYAVDSTRIQRELG 292
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWW 326
++ +GL T+ WY ++ WW
Sbjct: 293 FAPAVDLADGLAATVAWYHKHRSWW 317
>DICTYBASE|DDB_G0274991 [details] [associations]
symbol:DDB_G0274991 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AAFI02000012 RefSeq:XP_644280.1 STRING:Q554P3
EnsemblProtists:DDB0217586 GeneID:8619708 KEGG:ddi:DDB_G0274991
eggNOG:NOG238479 InParanoid:Q554P3 OMA:ILKCGRS
ProtClustDB:CLSZ2431047 Uniprot:Q554P3
Length = 172
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 95/171 (55%), Positives = 128/171 (74%)
Query: 498 SGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-NVCTLRVRMPISSDLNNPRNFITKIS 556
SGIG+KEE+ N+ S YS TK MVE+L K Y+ N TLR+RMPIS +LN PRNFITKI
Sbjct: 3 SGIGFKEEEEFNYFESHYSVTKQMVEKLTKHYESNTLTLRLRMPISENLNEPRNFITKII 62
Query: 557 RYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFK 616
Y +VVNIPNS TVL +LLPI+I+M+ + ++G++NF NPGV+SHNEIL++Y INP FK
Sbjct: 63 NYERVVNIPNSCTVLPDLLPIAIDMSIKQIKGVYNFVNPGVISHNEILDLYTLLINPNFK 122
Query: 617 WVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKK 667
+ NFT EQ+K++ RSNN +D +KL+ +P + +IK S I+ +F +KK
Sbjct: 123 YQNFTEIEQSKILKCGRSNNHLDTTKLESLYPTIPNIKKS-IENIFLNSKK 172
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 424 (154.3 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 108/281 (38%), Positives = 158/281 (56%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS--NFKFVKGDIA 67
LITG AGFI S+ + + YP++ +DKL Y SN + SK + NF+F++ D+A
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 68 S--ADLVNFLLITESIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT- 121
+ L F++ I+ I H FAA++ VD SF + FTKNNI T LLE ++
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILL 132
Query: 122 G---QIRR---FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
G ++R F+HVSTDEVYGE DE+A V E S+L PT+PY+A+KA ++++ +Y
Sbjct: 133 GKKEELRNRLNFVHVSTDEVYGEQDENASVD--EKSKLNPTSPYAASKAAVDLIIQSYRY 190
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIP-------KFILLAMRGL---PLPIHGDGSNVRSY 225
SY + V R NNVYGP Q+ EKLIP KFI + + + +HGDG + R Y
Sbjct: 191 SYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKY 250
Query: 226 LYCEDVAEAFECILHK--GEVGHVYNVGTKKERRVIDVAKD 264
L+ D A + + K EV H + +K ++ ++ D
Sbjct: 251 LHIYDFINAIDLVWMKQGSEVYHS-TLESKMSGQIFNIGSD 290
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 173 YG-RSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMRGLP----LPIHGDGSNVRSYL 226
YG R Y +I T G NQ +K++ I L GL L I+ D N +
Sbjct: 205 YGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIY-DFINAIDLV 263
Query: 227 YCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLF--------SMDPETSIK 278
+ + +E + L G ++N+G+ E + + K IC F ++D I
Sbjct: 264 WMKQGSEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYIT 323
Query: 279 FVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
FV++R +ND RY L+ +K+ SLGW + E GLRK I+ Y
Sbjct: 324 FVQDRNYNDSRYSLNYEKIKSLGWRPQIPLETGLRKLIDEY 364
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 376 (137.4 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 105/323 (32%), Positives = 159/323 (49%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
KNIL+TGA GFI SH+C L++ +K+ L + + + +L S + + V GD+
Sbjct: 2 KNILVTGADGFIGSHLCESLVKK--GFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDL 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ IT++ID I H A + S+ + N+ GT +LEA K +I
Sbjct: 60 RDSFFCE--KITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK-KNEISH 116
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FIH ST EVYG V E L P +PYSA+K A+M+ ++Y S+ L V R
Sbjct: 117 FIHTSTSEVYGTA---FYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARP 173
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
N YGP Q +IP I + G GD S R + D E F +L+ G
Sbjct: 174 FNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGE 233
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN----RPFNDQRYFL--DDQKLT-S 299
VYN+G+ E + +V I K+ ++ +K +++ RP N + + L D KL +
Sbjct: 234 VYNIGSGVEYSMQEVLNLIQKIL----DSKVKIIQDEQRLRPKNSEVFRLCCDANKLKKA 289
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
W + EEGLR++IE++ +N
Sbjct: 290 TNWQSKISLEEGLRQSIEYFKEN 312
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 332 (121.9 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 94/319 (29%), Positives = 148/319 (46%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKG 64
K ++ G AG I SH +RL++ ++++ D +NL + K + G
Sbjct: 7 KKFVVIGGAGLIGSHTVDRLLQE-DVAEVIIYDNF-VRGTRENLAQALRDPRTKIYDIGG 64
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DI D++N L + +D + HFAA + + + NI GT +LE C G +
Sbjct: 65 DINQTDILNTAL--KGVDGVFHFAALWLLQ-CYEYPRSAFQTNIQGTFNVLETCVAQG-V 120
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+R + S+ VYG+ E+ + EA Y ATK E + AY YGLP +
Sbjct: 121 KRLVFSSSASVYGDALEEPMT---EAHPFNSRTFYGATKIAGEAMATAYHHRYGLPFVGL 177
Query: 185 RGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R NVYGP Q +I K + +G P+ ++GDGS ++Y ED A A C +
Sbjct: 178 RYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMK 237
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV-ENRPFNDQRYFLDDQKLTS 299
V YNVGT K ++++AK+I K+ +I+F+ + F R +
Sbjct: 238 ADTVDEYYNVGTGKRTSILELAKEIQKITGTSD--NIQFLPQGTTFVKNRIGCPKKAAEQ 295
Query: 300 LGWSERTIWEEGLRKTIEW 318
+G+ EGL++ IEW
Sbjct: 296 IGFKAEVGLTEGLQRLIEW 314
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 302 (111.4 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 94/346 (27%), Positives = 157/346 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 66 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 122
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 123 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 173
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPVIT 183
+ ST EVYG+ + ++ + P P Y K AE + AY + G+ V
Sbjct: 174 LLLASTSEVYGDPEVHPQTEDYWG-HVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRV 232
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 233 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 292
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SL 300
V N+G +E +++ A+ I L E I+F+ + Q+ D +K L
Sbjct: 293 N-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLML 349
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
GW EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 350 GWEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARIKKGR 393
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 301 (111.0 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 93/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 89 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 260 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 316
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 317 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARIKKGR 359
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 301 (111.0 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 99/319 (31%), Positives = 152/319 (47%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLKNLIPSKASSNFKFVKGDIA 67
L+TGAAGFI S + +RL+ + + +V LD +NL++L + A FV+ DI
Sbjct: 4 LVTGAAGFIGSTLVDRLLAD--GHSVVGLDNFATGRATNLEHLADNSAHV---FVEADIV 58
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ADL + +L + + H AAQ V S + N+ GT L EA + TG +R+
Sbjct: 59 TADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTG-VRKI 116
Query: 128 IHVSTD-EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+H S+ +YG E E + P +PY+A K E+ + + YGL
Sbjct: 117 VHTSSGGSIYGTPPE---YPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAP 173
Query: 187 NNVYGPNQFPEK---LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
NVYGP Q P ++ F + G P + GDG+N R Y++ +DV +AF +
Sbjct: 174 ANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVG 233
Query: 244 VGHVYNVGTKKER--RVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-L 300
G +N+GT KE R + A DPE F R + +R LD L
Sbjct: 234 GGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPE----FHPPRLGDLKRSCLDIGLAERVL 289
Query: 301 GWSERTIWEEGLRKTIEWY 319
GW + +G+R+T+E++
Sbjct: 290 GWRPQIELADGVRRTVEYF 308
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 305 (112.4 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 95/346 (27%), Positives = 159/346 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 146
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 147 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 197
Query: 127 FIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ ST EVYG+ + ++ H + + P Y K AE + AY + G+ V
Sbjct: 198 LLLASTSEVYGDPEVHPQNEDYWGH-VNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 256
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R N +GP +++ FIL A++G PL ++G G+ R++ Y D+ +++
Sbjct: 257 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNS 316
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL- 300
V N+G +E +++ A+ I KL E I+F+ + Q+ D +K L
Sbjct: 317 N-VSSPVNLGNPEEHTILEFAQLIKKLVGSGSE--IQFLSEAQDDPQKRKPDIRKAKLLL 373
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
GW EEGL K I ++ + ++ + +P P+ M GR
Sbjct: 374 GWEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARMKKGR 417
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 295 (108.9 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 92/326 (28%), Positives = 155/326 (47%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K LITG AGFI SH+ L+ Y + ++D Y KN + + + +
Sbjct: 3 KKCLITGGAGFIGSHLAEELVGR--GYNVTIVDNF-YKG--KNKYHDELMKEIRVIPISV 57
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + + L+ + D + H AA V + S E + N GT +L+A + G+ ++
Sbjct: 58 LDKNSI-YELVNQH-DVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAA-LKGK-KK 113
Query: 127 FIHVSTDEVYGETDED-AVVGN--HEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ ST EVYG+ + G+ + A+ + + Y+ K E L + Y GLPV
Sbjct: 114 VVFASTSEVYGKAKPPFSEEGDRLYGATSKIRWS-YAICKTLEETLCLGYALE-GLPVTI 171
Query: 184 TRGNNVYGPN--QFPEK-LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R N+YGP P +IP+FI A++G + ++GDG R + Y D EA +
Sbjct: 172 VRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMD 231
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE-TSIKFVENRP--FND-QRYFLDDQK 296
+ G + N+G++ E+ + +VA+ I KL + + F E P F + D K
Sbjct: 232 EKVNGEIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTK 291
Query: 297 LTSL-GWSERTIWEEGLRKTIEWYTQ 321
L L + + WE+GL++TI+W+ +
Sbjct: 292 LKDLVQFQAKVTWEDGLKETIKWFRE 317
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 295 (108.9 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 90/320 (28%), Positives = 152/320 (47%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI SH+C RL+ + ++ LD + + +N+ F+ ++ DI
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQ--GHDVLCLDNF-FTGSKRNIDRLMDFHRFEVIRHDIIE 59
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-RF 127
L+ +D I + A + N + K ++ GT +L K ++R R
Sbjct: 60 PILLE-------VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAK---RVRARI 109
Query: 128 IHVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ ST EVYG+ ++ GN + + + Y K AE L+M Y R G+ +
Sbjct: 110 LQASTSEVYGDPTIHPQPESYWGN--VNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRI 167
Query: 184 TRGNNVYGPN--QFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R N YGP + +++ F++ A+RG L ++GDGS RS+ Y +D+ + ++
Sbjct: 168 ARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEH 227
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL--TS 299
+ N+G +E +I+ A+ ++ +M +S P +D R D L T
Sbjct: 228 DQFCGPVNLGNPEETPIIEFAR---RIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTI 284
Query: 300 LGWSERTIWEEGLRKTIEWY 319
LGW R +EGL KTIE++
Sbjct: 285 LGWEPRVSLDEGLAKTIEYF 304
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 302 (111.4 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 92/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K IL+TG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 89 KRILVTGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 146 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARIKKGR 416
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 301 (111.0 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 146 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARIKKGR 416
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 301 (111.0 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 146 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARVKKGR 416
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 301 (111.0 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 146 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARVKKGR 416
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 301 (111.0 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/345 (26%), Positives = 157/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 146 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARVKKGR 416
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 267 (99.0 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 70/238 (29%), Positives = 111/238 (46%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS-NLK--NLIPSKASSNFKFVK 63
+IL+TGAAGFI H+ RL+ ++V LD L DY NLK L + F FV+
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGD--RVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVR 60
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
+A + L + D +++ AAQ V S N + +N+ G +LE C+ G
Sbjct: 61 TSLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHG- 119
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
++ ++ S+ VYG +H P + Y+ATK E++ Y YGLP
Sbjct: 120 VKHLVYASSSSVYGANTAMPFSIHHNVDH--PVSLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R VYGP P+ + F + G P+ ++ G R + Y +D+ E ++ +
Sbjct: 178 LRFFTVYGPWGRPDMALFLFTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMDR 235
Score = 48 (22.0 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 294 DQKLTSLGWSERTIWEEGLRKTIEWY 319
D + +G+ T EG+ + +EWY
Sbjct: 305 DDLMNDVGFKPATPIGEGIERFVEWY 330
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 295 (108.9 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 92/345 (26%), Positives = 156/345 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 83 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 139
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 140 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 190
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 251 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 310
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K L
Sbjct: 311 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIRKAKMMLA 367
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
W EEGL K I ++ + ++ + +P P+ + GR
Sbjct: 368 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPKPARIKKGR 410
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 292 (107.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 93/346 (26%), Positives = 159/346 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 143
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 144 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 194
Query: 127 FIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ ST EVYG+ + ++ H + + P Y K AE + AY + G+ V
Sbjct: 195 LLLASTSEVYGDPEVHPQNEDYWGH-VNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 253
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R N +G +++ FIL A++G L ++G GS R++ Y D+ +++
Sbjct: 254 ARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNS 313
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL- 300
+ N+G +E +++ A+ I L + + I+F+ + QR D +K L
Sbjct: 314 N-ISSPVNLGNPEEHTILEFAQLIKSLVAS--RSHIQFLPEAQDDPQRRRPDIRKAKLLL 370
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR 346
GW EEGL KTI+++++ + + +P P+ M GR
Sbjct: 371 GWEPVVPLEEGLNKTIQYFSRELEH--QANNQYIPKPKAARMKKGR 414
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 88/333 (26%), Positives = 151/333 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS---NLKNLIPSKASSNFKFVKGD 65
L+TGAAGFI ++V RL +++V +D L DY L L P +A SNF F+K D
Sbjct: 4 LVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLD 61
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+A + + L + ++H AAQ V S N + +N+ G +LE C+ +I
Sbjct: 62 LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHKIE 120
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
++ S+ VYG + + + E S P + Y+ATK E++ Y Y LP R
Sbjct: 121 HLVYASSSSVYGLNQK--MPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLR 178
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG--- 242
VYGP P+ + KF + G + ++ G R + Y +D+ E + K
Sbjct: 179 FFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPSP 238
Query: 243 ------EVG---------HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
E G V+N+G +++D + + + E +F+ +P +
Sbjct: 239 TPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGI--EAKKQFLPMQPGDV 296
Query: 288 QRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWY 319
+ D + L ++G+ + + G+ K ++WY
Sbjct: 297 HATWADTEDLFKAVGYKSQVDIDTGVAKFVDWY 329
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 88/333 (26%), Positives = 151/333 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS---NLKNLIPSKASSNFKFVKGD 65
L+TGAAGFI ++V RL +++V +D L DY L L P +A SNF F+K D
Sbjct: 4 LVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLD 61
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+A + + L + ++H AAQ V S N + +N+ G +LE C+ +I
Sbjct: 62 LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHKIE 120
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
++ S+ VYG + + + E S P + Y+ATK E++ Y Y LP R
Sbjct: 121 HLVYASSSSVYGLNQK--MPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLR 178
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG--- 242
VYGP P+ + KF + G + ++ G R + Y +D+ E + K
Sbjct: 179 FFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPSP 238
Query: 243 ------EVG---------HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
E G V+N+G +++D + + + E +F+ +P +
Sbjct: 239 TPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGI--EAKKQFLPMQPGDV 296
Query: 288 QRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWY 319
+ D + L ++G+ + + G+ K ++WY
Sbjct: 297 HATWADTEDLFKAVGYKSQVDIDTGVAKFVDWY 329
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 88/311 (28%), Positives = 144/311 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI SH+ ++L++N + +++V D + + NL F+ ++ D+
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQN-EKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 90
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L E +D I H A N + K N+ GT +L K G R +
Sbjct: 91 P------LFVE-VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 141
Query: 129 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 142 LTSTSEVYGDPLVHPQTESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 199
Query: 185 RGNNVYGP--NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N YGP N +++ FI A+RG L + G+ RS+ Y D+ E ++
Sbjct: 200 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGD 259
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
+ G + N+G E ++++A+ + +L P+ IK VEN P + ++ D K LG
Sbjct: 260 QTGPI-NIGNPGEFTMVELAETVKELIK--PDVEIKMVENTPDDPRQRKPDISKAKEVLG 316
Query: 302 WSERTIWEEGL 312
W + EGL
Sbjct: 317 WEPKVKLREGL 327
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 277 (102.6 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 91/324 (28%), Positives = 138/324 (42%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
K IL+TGA GFI SH+ L+ R Y V + + L +L P S F GD
Sbjct: 6 KKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA-GD 64
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I V + + D ++H AA + S+ + + N+ GT +++A + G +
Sbjct: 65 IRDPHGVREAM--KGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG-VA 121
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ +H ST EVYG + H L +PYSA+K GA+ + M++ S+ PV R
Sbjct: 122 KVVHTSTSEVYGTARFVPITEEHP---LQGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244
N YGP Q IP I G G R Y D F + + V
Sbjct: 179 PFNTYGPRQSARAFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAVAESEKSV 238
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ--RYFLDDQKLTSL-G 301
G V N+G+ E + + A+ I + D E RP + R + D K L
Sbjct: 239 GEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWADTSKAKRLLD 298
Query: 302 WSERTIWEEGLRK----TIEWYTQ 321
+ ++GLR+ T+EW+ +
Sbjct: 299 HGQNYGGKDGLRRGLVETVEWFVR 322
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 277 (102.6 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 89/311 (28%), Positives = 146/311 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILI+G AGFI SH+ ++L+ N + ++VV D + + +NL F+ ++ D+
Sbjct: 47 ILISGGAGFIGSHLVDKLMEN-EKNEVVVADNY-FTGSKENLKKWIGHPRFELIRHDVTE 104
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 105 P-----LLI--EVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 155
Query: 129 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 156 LTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 213
Query: 185 RGNNVYGP--NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N YGP N +++ FI A+RG L + G+ RS+ Y D+ + ++
Sbjct: 214 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGN 273
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
+ G + N+G E ++++A+ + +L ++P IK VEN P + ++ D K LG
Sbjct: 274 DTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDISKAKEVLG 330
Query: 302 WSERTIWEEGL 312
W + EGL
Sbjct: 331 WEPKVKLREGL 341
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 273 (101.2 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 88/311 (28%), Positives = 145/311 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILI+G AGFI SH+ ++L+ N + +++V D + + NL F+ ++ D+
Sbjct: 31 ILISGGAGFIGSHLVDKLMEN-EKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 88
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 89 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 139
Query: 129 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 140 LTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 197
Query: 185 RGNNVYGP--NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N YGP N +++ FI A+RG L + G+ RS+ Y D+ + ++
Sbjct: 198 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGD 257
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
+ G + N+G E ++++A+ + +L ++P IK VEN P + ++ D K LG
Sbjct: 258 DTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDITKAKEVLG 314
Query: 302 WSERTIWEEGL 312
W + EGL
Sbjct: 315 WEPKVKLREGL 325
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 280 (103.6 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 85/319 (26%), Positives = 150/319 (47%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+++TG AGF+ SH+ +RL+ ++V+D + +N++ ++ NF+ ++ D+
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDT--VIVVDNF-FTGRKENVMHHFSNPNFEMIRHDVVE 177
Query: 69 ADLVNFLLITESIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
L+ +D I H A V F N + K N+ GT +L K G RF
Sbjct: 178 PILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 227
Query: 128 IHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ ST EVYG+ + V + + + + Y K AE L M Y R + V R
Sbjct: 228 LLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 287
Query: 186 GNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
N YGP + +++ F+ A+R PL ++GDG RS+ + D+ E ++
Sbjct: 288 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 347
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL-GW 302
VG +N+G E ++++AK + + ++DP +I+F N + + D K L GW
Sbjct: 348 VGP-FNLGNPGEFTMLELAKVVQE--TIDPNANIEFRPNTEDDPHKRKPDITKAKELLGW 404
Query: 303 SERTIWEEGLRKTIEWYTQ 321
+ +GL ++ + Q
Sbjct: 405 EPKVSLRQGLPLMVKDFRQ 423
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 251 (93.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 87/319 (27%), Positives = 149/319 (46%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
LITG AGF+ ++ N L E + V N + +P N + + DI +
Sbjct: 4 LITGVAGFVGKYLANHLT----EQNVEVFGT---SRNNEAKLP-----NVEMISLDIMDS 51
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
V ++ D I H AA++ V +S+ N N++GT +L+A + + R +
Sbjct: 52 QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 111
Query: 130 VSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
+ + E YG E++ V E +QL P +PY +KA ML Y ++YG+ +I TR N
Sbjct: 112 IGSSEEYGMILPEESPVS--EENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 189 VYGPNQ---FPEKLIPKFIL-LAM-RGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
GP Q F + K I+ + M + P+ G+ VR + D+ +A+ + G+
Sbjct: 170 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK 229
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGW 302
G VYNV + R+ DV + + ++ +T + ++ RP +++L S GW
Sbjct: 230 TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGW 289
Query: 303 SERTIWEEGLRKTIEWYTQ 321
R E+ L + ++ Y Q
Sbjct: 290 KPRIPLEKSLFEILQSYRQ 308
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 252 (93.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 92/332 (27%), Positives = 148/332 (44%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLKNL---IPSKASSNF 59
+PK LITG AGFI S++ L+ K+V LD + N + + ++ NF
Sbjct: 14 SPKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNF 71
Query: 60 KFVKGDIASADLVNFLL--ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 117
FVKGDI + L +D I+H AA V S + NI G +L A
Sbjct: 72 YFVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTA 131
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
K T Q++ F++ ++ YG D A+ +A P +PY+ TK E+ + ++Y
Sbjct: 132 AKET-QVKSFVYAASSSTYG--DHPALPKVEDAIGK-PLSPYAVTKYVNELYADVFHKTY 187
Query: 178 GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
GL R NV+G Q P+ +IPK+ + + L I+GDG R + + E+ +
Sbjct: 188 GLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQ 247
Query: 234 AFECILHKGEVG--HVYNV--GTKKERRVI-DVAKDICKLFSMDPETSIKFVENRPFNDQ 288
A + G VYNV G + + + K + +D + S + + R + +
Sbjct: 248 ANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVR 307
Query: 289 RYFLDDQKLTSL-GWSERTIWEEGLRKTIEWY 319
D K SL G+ ++G+ K + WY
Sbjct: 308 HSQADISKAKSLIGFEPEFKIQQGIDKAMPWY 339
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 252 (93.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 92/332 (27%), Positives = 148/332 (44%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLKNL---IPSKASSNF 59
+PK LITG AGFI S++ L+ K+V LD + N + + ++ NF
Sbjct: 14 SPKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNF 71
Query: 60 KFVKGDIASADLVNFLL--ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 117
FVKGDI + L +D I+H AA V S + NI G +L A
Sbjct: 72 YFVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTA 131
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
K T Q++ F++ ++ YG D A+ +A P +PY+ TK E+ + ++Y
Sbjct: 132 AKET-QVKSFVYAASSSTYG--DHPALPKVEDAIGK-PLSPYAVTKYVNELYADVFHKTY 187
Query: 178 GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
GL R NV+G Q P+ +IPK+ + + L I+GDG R + + E+ +
Sbjct: 188 GLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQ 247
Query: 234 AFECILHKGEVG--HVYNV--GTKKERRVI-DVAKDICKLFSMDPETSIKFVENRPFNDQ 288
A + G VYNV G + + + K + +D + S + + R + +
Sbjct: 248 ANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVR 307
Query: 289 RYFLDDQKLTSL-GWSERTIWEEGLRKTIEWY 319
D K SL G+ ++G+ K + WY
Sbjct: 308 HSQADISKAKSLIGFEPEFKIQQGIDKAMPWY 339
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 232 (86.7 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 75/250 (30%), Positives = 120/250 (48%)
Query: 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE 141
D ++H A QT+V +F + + N+ GT LL+A K G F+++S+ +VYG+ E
Sbjct: 55 DAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAE 114
Query: 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP 201
A + HE P NPY+ +K AE L + +G + G V+ R N GP Q +I
Sbjct: 115 -AALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIA 173
Query: 202 ---KFILLAMRGLP---LPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKE 255
+ I +GL L + GD R +L +DV A+ +L GE G VYNV + +E
Sbjct: 174 SAARQIARMKQGLQANRLEV-GDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSGQE 232
Query: 256 RRV---IDVAKDICKL---FSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWE 309
+++ I++ DI ++ DP ++ E R L D + GW +
Sbjct: 233 QKIRELIELLADIAQVELEIVQDP-ARMRRAEQRRVRGSHARLHD----TTGWKPEITIK 287
Query: 310 EGLRKTI-EW 318
+ LR + +W
Sbjct: 288 QSLRAILSDW 297
Score = 41 (19.5 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 7 KNILITGAAGFIASHV 22
+ + +TG +GF+ H+
Sbjct: 3 QRLFVTGLSGFVGKHL 18
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 241 (89.9 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 70/245 (28%), Positives = 109/245 (44%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS-NLKN--LIPSKASSNFKFVKGD 65
L+TG AGFI H+ RL+ I+ LD L DY NLK L K +F F K D
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDH--ILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKLD 66
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+A + L DT++H AAQ V S N + + +N+ G +LE C+ ++
Sbjct: 67 LADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQS-VK 125
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ S+ VYG ++ + P Y+A+K E++ +Y + LP R
Sbjct: 126 HLVFASSSSVYGANEKYPFSESDNVDH--PIALYAASKKANELMAHSYAHLFQLPCTGLR 183
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL-HKGEV 244
VYGP P+ + KF + P+ ++ G R + Y +D+ + L H E
Sbjct: 184 FFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTLDHPPEP 243
Query: 245 GHVYN 249
Y+
Sbjct: 244 NSAYS 248
Score = 52 (23.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIK-FVENRPFNDQRYFLDDQKLTS-LGWSE 304
+YN+G+ + + + K + + +IK F+ +P + + D +L +
Sbjct: 263 IYNIGSNNPILLTNFIAILEKTLN---KKAIKNFLPLQPGDVPETYADVSQLEKDFQYRP 319
Query: 305 RTIWEEGLRKTIEWYTQ 321
RT ++G++ +EWY Q
Sbjct: 320 RTPLQKGVKNFVEWYLQ 336
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 248 (92.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 77/257 (29%), Positives = 123/257 (47%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG GFI SH+ + L+ +K+ V+D L S L+NL + + + G++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQ--GFKVRVMDNLSNGS-LENLKCGQRDK-LEIINGNLTD 59
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L++ + + +T+ H AA +V NS ++ +NN TH LLEA + ++ R +
Sbjct: 60 KFLLDSAV--KGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMR-RNRVDRLV 116
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
S+ VYGE+ V + + LLP + Y A+K E L+ AY YGL R N
Sbjct: 117 FASSAAVYGESG--LTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFAN 174
Query: 189 VYGPNQFPEKLIPKFIL-LAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG--EVG 245
+ G + +I F+ L L + GDGS + YL+ D K +G
Sbjct: 175 IVGSRRH-SGVIYDFVSRLRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNLG 233
Query: 246 HVYNVGTKKERRVIDVA 262
+YN+GT V D+A
Sbjct: 234 -LYNLGTPDSVAVRDIA 249
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 245 (91.3 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 94/338 (27%), Positives = 148/338 (43%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+ILI G AG+I SH +L+ +VV+D L + ++ I A KF GD+
Sbjct: 3 SILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQ--TGHEDAITEGA----KFYNGDLR 54
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + E+I+ +MHFAA + V S ++ NN+YG LLE ++ +F
Sbjct: 55 DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKF 113
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
I ST YGE D D + E + PTN Y TK E ++ Y ++ L R
Sbjct: 114 IFSSTAATYGEVDVDLIT---EETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYF 170
Query: 188 NVYG--PNQF------PEK-LIPKFILLAM-RGLPLPIHGD------GSNVRSYLYCED- 230
NV G PN PE LIP + +A+ + + + GD G+ +R Y++ ED
Sbjct: 171 NVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 231 VAEAFECI--LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
VA F + L G YN+G V ++ + ++ + E + R +
Sbjct: 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV--TNHEIPAEVAPRRAGDPA 288
Query: 289 RYFLDDQKLTS-LGWSERTIWEEGL-RKTIEWYTQNPD 324
R QK LGW R + + + W+ + P+
Sbjct: 289 RLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN 326
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 245 (91.3 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 86/333 (25%), Positives = 146/333 (43%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-----DYCSNLKNLIPSKASSNF 59
+PK LITG AGFI S++ +L++ ++ LD +++L+ S+ F
Sbjct: 14 SPKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRF 71
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
F+ GDI + + +D ++H AA V S + NI G +L+A K
Sbjct: 72 SFINGDIRDYAICE--AVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
+++ F + ++ YG D A+ E + P +PY+ TK E+ Y R+YG
Sbjct: 130 -EAEVKSFTYAASSSTYG--DHPALP-KVEQNIGNPLSPYAVTKYVNELYASVYARTYGF 185
Query: 180 PVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA- 234
I R NV+G Q P +IPK+ ++G + I+GDG R + Y ++V +
Sbjct: 186 ETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMN 245
Query: 235 FECILHKGEV-GHVYNVGTKKERRVIDV---AKDICKLFSMDPETSIKFVENRPFNDQRY 290
E VYNV + D+ KD ++ + + + R D R+
Sbjct: 246 ILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRA-GDVRH 304
Query: 291 FLDD--QKLTSLGWSERTIWEEGLRKTIEWYTQ 321
D + +T LG+ EG+ + + WY +
Sbjct: 305 SQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 245 (91.3 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 86/333 (25%), Positives = 146/333 (43%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-----DYCSNLKNLIPSKASSNF 59
+PK LITG AGFI S++ +L++ ++ LD +++L+ S+ F
Sbjct: 14 SPKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRF 71
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
F+ GDI + + +D ++H AA V S + NI G +L+A K
Sbjct: 72 SFINGDIRDYAICE--AVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
+++ F + ++ YG D A+ E + P +PY+ TK E+ Y R+YG
Sbjct: 130 -EAEVKSFTYAASSSTYG--DHPALP-KVEQNIGNPLSPYAVTKYVNELYASVYARTYGF 185
Query: 180 PVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA- 234
I R NV+G Q P +IPK+ ++G + I+GDG R + Y ++V +
Sbjct: 186 ETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMN 245
Query: 235 FECILHKGEV-GHVYNVGTKKERRVIDV---AKDICKLFSMDPETSIKFVENRPFNDQRY 290
E VYNV + D+ KD ++ + + + R D R+
Sbjct: 246 ILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRA-GDVRH 304
Query: 291 FLDD--QKLTSLGWSERTIWEEGLRKTIEWYTQ 321
D + +T LG+ EG+ + + WY +
Sbjct: 305 SQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 195 (73.7 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 52/189 (27%), Positives = 92/189 (48%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-----CSNLKNLIPSKASSNFKFV 62
++L+TG AG+I SH RL+R+ Y++ ++D L L+ L P + +F+
Sbjct: 96 HVLVTGGAGYIGSHAALRLLRD--SYRVTIVDNLSRGNLGAVKTLQQLFPQ--TGRLQFI 151
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
D+ V + + D +MHFAA +V S ++ N T +LEA
Sbjct: 152 YADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAM-ARH 210
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
++++ I+ ST YGE ++ + E + +P NPY K AE +++ + ++ + V+
Sbjct: 211 KVKKLIYSSTCATYGEPEKMPIT---EDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVM 267
Query: 183 TTRGNNVYG 191
R NV G
Sbjct: 268 ILRYFNVIG 276
Score = 107 (42.7 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 218 DGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDPE 274
DG+ +R Y+ D+ +A L K + VG +YNVGT K R V + + CK + E
Sbjct: 323 DGTCIRDYIDVTDLVDAHVKALEKAQPRKVG-IYNVGTGKGRSVKEFV-EACKK-ATGVE 379
Query: 275 TSIKFVENRPFNDQRYFLDDQK-LTSLGWSER-TIWEEGLRKTIEWYTQNP 323
+ F+ RP + + D K L L W+ R T ++ L+ W +P
Sbjct: 380 IKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHP 430
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 578 SIEMAKRNLRGIWNF-TNPGVVSHNEILEMYKKYINPEFKWVNF 620
++E A+ GI+N T G S E +E KK E K V+F
Sbjct: 343 ALEKAQPRKVGIYNVGTGKGR-SVKEFVEACKKATGVEIK-VDF 384
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 209 (78.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 57/195 (29%), Positives = 95/195 (48%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFV 62
++L+TG AG+I SH RL++ Y++ ++D L + L+ L P +F+
Sbjct: 72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFPEPG--RLQFI 127
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
D+ A VN + + D +MHFAA +V S ++ N T V+LE G
Sbjct: 128 YADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG 187
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
++ I+ ST YGE D ++ E + +P NPY K AE +++ + ++ + V+
Sbjct: 188 -VKTLIYSSTCATYGEPD---IMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVM 243
Query: 183 TTRGNNVYGPNQFPE 197
R NV G + PE
Sbjct: 244 ILRYFNVIGSD--PE 256
Score = 88 (36.0 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 218 DGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDPE 274
DG+ VR Y+ D+ +A L K + VG +YNVGT K V + + CK + E
Sbjct: 299 DGTCVRDYIDVTDLVDAHVKALQKAKPRKVG-IYNVGTGKGSSVKEFV-EACKK-ATGVE 355
Query: 275 TSIKFVENRPFNDQRYFLDDQKLTS-LGWSER-TIWEEGLRKTIEWYTQNPDWWG 327
I ++ R + + D K+ L W+ + T +E L W + + +G
Sbjct: 356 IKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 578 SIEMAKRNLRGIWNF-TNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNN 636
+++ AK GI+N T G S E +E KK E K +++ L +A S
Sbjct: 319 ALQKAKPRKVGIYNVGTGKGS-SVKEFVEACKKATGVEIK-IDY-LPRRAGDYAEVYS-- 373
Query: 637 EMDASKLKKEF---PELLSIKDSL 657
D SK++KE + ++K+SL
Sbjct: 374 --DPSKIRKELNWTAKHTNLKESL 395
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 237 (88.5 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 85/332 (25%), Positives = 146/332 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS-NLKNLIPSKAS-SNFKFVKGDI 66
L+TGAAGFI S V RL + +V +D + DY LK ++ ++F F+K DI
Sbjct: 4 LVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A +++ L + D ++H AAQ V S N + +N+ G +LE C+ Q++
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQVKH 120
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
I+ S+ VYG ++ P + Y+ATK E++ +Y Y +P R
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGLRF 178
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH------ 240
VYG P+ F + G + I+ +G R + + +D+ E I
Sbjct: 179 FTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIADVIPERD 238
Query: 241 ---KGEVGH---------VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
K E G VYN+G ++D K I ++ + + F E +P +
Sbjct: 239 AEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKN--FREMQPGDVY 296
Query: 289 RYFLDDQKL-TSLGWSERTIWEEGLRKTIEWY 319
+ + D Q L + + + +EG+ + + W+
Sbjct: 297 QTYADTQDLFKATNYVPKISVKEGVAELVVWF 328
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 237 (88.5 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 85/332 (25%), Positives = 146/332 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCS-NLKNLIPSKAS-SNFKFVKGDI 66
L+TGAAGFI S V RL + +V +D + DY LK ++ ++F F+K DI
Sbjct: 4 LVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A +++ L + D ++H AAQ V S N + +N+ G +LE C+ Q++
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQVKH 120
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
I+ S+ VYG ++ P + Y+ATK E++ +Y Y +P R
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGLRF 178
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH------ 240
VYG P+ F + G + I+ +G R + + +D+ E I
Sbjct: 179 FTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIADVIPERD 238
Query: 241 ---KGEVGH---------VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
K E G VYN+G ++D K I ++ + + F E +P +
Sbjct: 239 AEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKN--FREMQPGDVY 296
Query: 289 RYFLDDQKL-TSLGWSERTIWEEGLRKTIEWY 319
+ + D Q L + + + +EG+ + + W+
Sbjct: 297 QTYADTQDLFKATNYVPKISVKEGVAELVVWF 328
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 243 (90.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 83/340 (24%), Positives = 156/340 (45%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
T K ILITG AGF+ SH+ ++L+ + ++++ LD + KN+ NF+ V
Sbjct: 135 TRKRILITGGAGFVGSHLVDKLMLD--GHEVIALDNY-FTGRKKNVEHWIGHPNFEMVHH 191
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ + V +D I H A+ + N + K N GT +L K ++
Sbjct: 192 DVVNPYFVE-------VDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAK---RV 241
Query: 125 RRFIHV-STDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+ + + ST EVYG+ + + H + + P Y K AE L++AY + +
Sbjct: 242 KATVLLASTSEVYGDPEVHPQPETYWGH-VNTIGPRACYDEGKRVAESLMVAYNKQENIK 300
Query: 181 VITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
+ R N +GP +++ FI+ A++ P+ I+G+G+ RS+ Y D+ + +
Sbjct: 301 IRIARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKL 360
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT 298
++ V N+G +E + A I L + I +E++ + Q+ D ++
Sbjct: 361 MNSNYSLPV-NIGNPEEHTIGQFATIIRDLVP-GSTSEIVNLESQQDDPQQRRPDIRRAA 418
Query: 299 S-LGWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
+ W+ + ++GL KT++++ D G +P P
Sbjct: 419 EQISWAPQVHMKDGLLKTVDYFRAEIDR-NKRGGKPVPEP 457
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 234 (87.4 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 79/332 (23%), Positives = 150/332 (45%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSK--ASSNFKFVKG 64
IL+TGAAGFI S + RL++ + + +D Y LK ++ A +F+ +
Sbjct: 3 ILVTGAAGFIGSEMALRLLKE--GHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
I ++ + + ++ + ++HFAAQ V S + +F NI G+ +++ + G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT- 119
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ + ST YG + A P Y+ATK +E++ ++ YG+P
Sbjct: 120 QHLVMASTSSAYGANQKFPFEERDSAPY--PLTIYAATKLASELIAHSHAHLYGVPTTVL 177
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244
R +VYGP P+ F +G P+ + G +R + Y +D+ EA ++ V
Sbjct: 178 RFFSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPPV 237
Query: 245 --GHV-----------Y---NVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
H+ Y N+G R++D + I E ++ ++ +P + +
Sbjct: 238 VGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNM--IDMQPGDVK 295
Query: 289 RYFLDDQKLTSL-GWSERTIWEEGLRKTIEWY 319
+ F D + L +L G++ T + G+ + ++WY
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWY 327
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 235 (87.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 79/325 (24%), Positives = 140/325 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
++TG AGFI SH+ + L+ +++ V+D L + +NL + + F DI
Sbjct: 7 IVTGGAGFIGSHMVDLLLDC--GFQVRVIDNLKG-GHRRNLEHRANNPDLTFEIKDICEL 63
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ L E++D + HFA + S N ++ + N+ GT +LE C +++ ++
Sbjct: 64 SAPHPLF--ENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLE-CARAANVKKLVY 120
Query: 130 VSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 189
++ YG D V E + P PY+ +K E + + YGLPV + R N
Sbjct: 121 AASSSCYGLAD----VPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 190 YGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
YG + F + P + GDG+ R +LY DVA AF +VG
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVG 236
Query: 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSE 304
+N+G + + + +L + ++++ RP + D K+ LGW
Sbjct: 237 ETWNLGAGNPQSI----NRLVELIGGE----VEYIPKRPGEPDCTWADISKIKRDLGWEP 288
Query: 305 RTIWEEGLRKTIE----WYTQNPDW 325
+ +G+ + + W+ P W
Sbjct: 289 TITFADGVSRMMSEIGVWHDA-PLW 312
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 240 (89.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 89/320 (27%), Positives = 144/320 (45%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ + L+ ++++V+D + +N+ NF+ + DI
Sbjct: 116 KRILITGGAGFVGSHLVDDLM--VQGHEVIVVDNF-FTGRKRNVEHWLGHENFELIHHDI 172
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGT-HVLLEACKVTGQIR 125
VN L I ID I H A+ + N + K N GT +VL A +V ++
Sbjct: 173 -----VNPLFI--EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKV- 224
Query: 126 RFIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+ ST EVYG+ + H + + P Y K +E L AY + + V
Sbjct: 225 --LIASTSEVYGDPTVHPQPETYWGH-VNPIGPRACYDEGKRVSETLSYAYAKQEKVQVR 281
Query: 183 TTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R N YGP +++ FIL A+R + ++G+G RS+ Y D+ + ++
Sbjct: 282 VARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMA 341
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
V N+G E+ + + A+ I KL P IK + + QR D + L
Sbjct: 342 SNYTQPV-NLGNPVEQTIGEFAEIIKKLVG-GPSV-IKQSKAMEDDPQRRKPDITRARQL 398
Query: 301 -GWSERTIWEEGLRKTIEWY 319
W + E GL++TI ++
Sbjct: 399 LHWEPKVPLETGLQRTISYF 418
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 239 (89.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 96/351 (27%), Positives = 147/351 (41%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KG 64
++L+TGA GF+ SHV + +R + +V LD + Y +LK S SS FV +G
Sbjct: 89 SVLVTGATGFVGSHV-SLALRKRGD-GVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEG 146
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ A L+ L + +MH AAQ V + N + +NI G LLE CK
Sbjct: 147 DLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQ 206
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ S+ VYG ++ + Q P + Y+ATK E + Y YGL +
Sbjct: 207 PAIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGLAITGL 264
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV---RSYLYCEDVAEAFECILHK 241
R VYGP P+ F ++G P+ I+ + V R + Y +D+ + C+
Sbjct: 265 RFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKG--CLGSL 322
Query: 242 GEVGHVYNVGTKKER----RVIDVAKD----ICKLFS-MDPETSIK----FVENRPFNDQ 288
G G KK R+ ++ + L ++ +K FVE P N
Sbjct: 323 DSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVE-MPGNGD 381
Query: 289 RYFLD---DQKLTSLGWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPH 336
F G+ T E GL+K + WY ++G + A L H
Sbjct: 382 VPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLS---YYGYNTKAKLVH 429
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 226 (84.6 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 84/310 (27%), Positives = 134/310 (43%)
Query: 9 ILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+ ITGA G + SH+ L+ + Y YC P+ S+ +F G A
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDVYAT-------YCR------PTIDPSDLQF-NG--A 46
Query: 68 SADLVNFLLITESI-----DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
D+ ++ + +SI D + H AAQ++ S+ E N+ GT ++ EA +
Sbjct: 47 EVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVR 106
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+ I + YG D V N E +L P +PY +KA +ML Y +SYG+ +
Sbjct: 107 PHAKIIVAGSSAEYGFVDPSEVPIN-ERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTV 165
Query: 183 TTRGNNVYGPNQFPEKL---IPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAFECI 238
R N GP + + L + + L I G+ R+ + D+ A +
Sbjct: 166 VARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLM 225
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDI---CKLFSMDPETSIKFVENRPFNDQRYFLDDQ 295
L KGE G YNVG + DV K + CK + PE + RP +++ + D
Sbjct: 226 LDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALL--RPTDEKIIYGDCS 283
Query: 296 KLTSL-GWSE 304
KL ++ GW +
Sbjct: 284 KLAAITGWQQ 293
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 223 (83.6 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 71/254 (27%), Positives = 121/254 (47%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGD 65
+L+TG +G+I SH C +L++N + +++LD L C++ ++++P K FV+GD
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEGD 58
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++
Sbjct: 59 IRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VK 117
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 176
FI S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 177 -YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYLY 227
Y PV G+ P P L+P +A+ R L I G DG+ VR Y++
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 228 CEDVAEAFECILHK 241
D+A+ + K
Sbjct: 236 VMDLADGHVVAMEK 249
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 205 (77.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 79/275 (28%), Positives = 129/275 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG GF+ + RL +N Y++ + N K + + KFV +
Sbjct: 3 MLVTGGTGFLGQKLAFRL-KNMG-YEVTATGR-----N-KTIGKVLEQNGIKFVHCPLED 54
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ V L + + D I H A + + +G +F N+ GT ++E + G I+R I
Sbjct: 55 RERV--LQVCKDKDYIFHSGAHS---SPWGKYEDFYNANVLGTKHIIEGSQKYG-IKRLI 108
Query: 129 HVSTDEVYGETDE-DAVVGNHEASQLLPTNPYSATKAGAEMLV-MAYGRSYGLPVITTRG 186
HVST +Y DE VV N + N Y+ TK AE + A+ ++GLPVIT R
Sbjct: 109 HVSTPSIYFYYDERQNVVENAKLPDTF-VNHYATTKYMAEQAIDQAF--AHGLPVITIRP 165
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH--KGEV 244
++GP ++P+ I + +G LP G + + Y E+V +A +H K +
Sbjct: 166 RALFGPGD--NAILPRLIKVCEKGA-LPRIGTENVLVDITYVENVVDALLLCMHSPKHTL 222
Query: 245 GHVYNVGTKKER-RVIDVAKDICKLFSMDPETSIK 278
G YN+ T ER + +V +++ K +D E K
Sbjct: 223 GQKYNI-TNDERINLYEVIENVMK--RLDKEVRYK 254
Score = 56 (24.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 261 VAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY- 319
++K I LF +P + K+ + Q +D K LG++ + EEG+ K ++W+
Sbjct: 271 ISKTI--LFGKEPILT-KYTVSVLSKSQTLSIDKAK-EELGYAPKVSIEEGITKFVDWWK 326
Query: 320 TQ 321
TQ
Sbjct: 327 TQ 328
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 219 (82.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 91/317 (28%), Positives = 133/317 (41%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG AG+I SHV +L + Y +VV D NL P + V GD++
Sbjct: 3 VLVTGGAGYIGSHVVRQL--SEAGYTVVVYD------NLSTGFPDALVHGERLVTGDLSD 54
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
++ L + T++HFAA S ++ NN T LL AC G + RFI
Sbjct: 55 TARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHG-VERFI 113
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
ST VYG D E S +P NPY +K +E ++ ++G+ + R N
Sbjct: 114 FSSTAAVYGIPDSGVAA---EESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFN 170
Query: 189 VYGPN-------QFPEKL-IPKFILLAMRGL--PLPIHG------DGSNVRSYLYCEDVA 232
V G + + PE + K A GL + I G DG+ +R Y++ ED+A
Sbjct: 171 VAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLA 230
Query: 233 EAFECIL---HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
A L KG NVG V +V D+ + S + RP +
Sbjct: 231 SAHLAALSYLEKGGESTRINVGYGSGSSVREVI-DMVRRVS-GVHFLAEEAPRRPGDPPS 288
Query: 290 YFLD-DQKLTSLGWSER 305
D+ T LGW+ R
Sbjct: 289 LVARADRARTLLGWTPR 305
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 218 (81.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 90/338 (26%), Positives = 158/338 (46%)
Query: 9 ILITGAAGFIASHVCNRL-IRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
IL+TG AG+I SH+ +L ++N K++V+D L K + ++A K + GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNE---KVLVVDNLS--KGHKKAVDTRA----KLIVGDFG 52
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+L+ + I ++H AAQ+ V S ++ + NI T LL+ + +++
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVM-LKANVKKM 111
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
+ ST VYGE ++ + + PTN Y +K E + Y + +G ++ R
Sbjct: 112 VFSSTAAVYGEPEKWPITEDFPQK---PTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYF 168
Query: 188 NVYG--PN------QFPEK-LIP---KFIL-----LAMRGLPLPIHGDGSNVRSYLYCED 230
N G P+ PE LIP K IL L + G P DG+ +R Y++ D
Sbjct: 169 NAAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTP-DGTCIRDYIHVND 227
Query: 231 VAEAFECILHK---GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
+AEA L+K E G VYN+G +K V ++ K ++ + + +++ + RP +
Sbjct: 228 LAEAHILALNKLNKDESG-VYNLGNQKGFSVKEIIKVAEEVTGV--KVKVRYGQRRPGDP 284
Query: 288 QRYFLDDQKLTS-LGWSERTIWEEGLRKTI-EWYTQNP 323
+K+ L ++ + + + +T EW+ NP
Sbjct: 285 AVLVASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNP 322
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 218 (81.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 89/317 (28%), Positives = 137/317 (43%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILI+G AG+I SH + ++ +++I VLD L S + K + FKF + D++
Sbjct: 3 ILISGGAGYIGSHTLRQFLKT--DHEICVLDNLSKGSKIAIEDLQKIRA-FKFFEQDLSD 59
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
V L E D I+HFAA V S N ++ NN T L+E C TG + +FI
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTG-VNKFI 118
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA-GAEMLVMAYGRSYGLPVITTRGN 187
ST YGE V E S L P NPY +K E+L A + R
Sbjct: 119 FSSTAATYGEPQTPVV---SETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYF 175
Query: 188 NVYGP-------NQFPEK-LIPKFILLAMRGL--PLPIHGD------GSNVRSYLYCEDV 231
NV G ++P+ L+ K G L I GD G+ +R +++ +D+
Sbjct: 176 NVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDI 235
Query: 232 AEAFECILH--KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
+ A L + +V+NVG V +V + + K+ +D ++ R +
Sbjct: 236 SSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVD--FKVELAPRRAGDPSV 293
Query: 290 YFLDDQKLTSL-GWSER 305
D K+ +L W +
Sbjct: 294 LISDASKIRNLTSWQPK 310
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 221 (82.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 88/333 (26%), Positives = 136/333 (40%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKAS-SNFKFVKGD 65
+L+TGAAGF+ +HV L R ++ LD + Y +LK + S V+GD
Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDG--VIGLDNFNDYYDPSLKRARRALLERSGIFIVEGD 156
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I +L+ L S +MH AAQ V + N + +NI G LLE CK
Sbjct: 157 INDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQP 216
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ S+ VYG + + Q P + Y+ATK E + Y YGL + R
Sbjct: 217 AIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 274
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIH---GDGSNVRSYLYCEDVAEAFECILHKG 242
VYGP P+ F ++G + I G+ R + Y +D+ + L
Sbjct: 275 FFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTA 334
Query: 243 E--VG-----------HVYNVGTKKERRVIDVAKDICKLFSMDPETS-IKFVENRPFNDQ 288
E G V+N+G V D+ + + + + + + IK N D
Sbjct: 335 EKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKMPRN---GDV 391
Query: 289 RYFLDDQKLTS--LGWSERTIWEEGLRKTIEWY 319
+ + L LG+ T + GL+K + WY
Sbjct: 392 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 424
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 150 (57.9 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-------DYCSNLKNL--IPSKASSN 58
+IL+TGAAGFI SH L+ + Y ++ +D D N +L + +
Sbjct: 2 HILVTGAAGFIGSHTVLELLNS--GYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD 59
Query: 59 FKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
F D+ + + D I+H AA V S ++ NN+ + L++ C
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
+ ++ F+ S+ VYG E + + Q + TNPY TK E +++ G++
Sbjct: 120 -LKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGI-TNPYGQTKYMMEQILIDVGKA 175
Score = 116 (45.9 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 45/148 (30%), Positives = 66/148 (44%)
Query: 192 PNQFPEKLIPKFILLAMRGLP-LPIHGD------GSNVRSYLYCEDVAE----AFECILH 240
P P L+P +A+ LP L I+GD G+ VR Y++ D+A+ AF+ I
Sbjct: 202 PKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKT 261
Query: 241 KGEVG-HVYNVGTK---KERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
G +G +YN+GT R+++D K K+ D +K RP + + D
Sbjct: 262 VGNIGTEIYNLGTGVGYSVRQMVDALK---KVSGRD--IPVKIGVPRPGDVASVYCDPSL 316
Query: 297 LTS-LGWSERTIWEEGLRKTIEWYTQNP 323
LGW T EE W T+NP
Sbjct: 317 AQEKLGWRAETGLEEMCADLWNWQTKNP 344
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 73/252 (28%), Positives = 111/252 (44%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIA 67
ILITG AG+I SH C L+ N YKI+V+D L S N + F+F K ++
Sbjct: 3 ILITGGAGYIGSHTCVELLNN--NYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVL 60
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + +N + + +I+ ++HFA V S + NNI VL + + ++ F
Sbjct: 61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQ-KHNVKNF 119
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPVITTRG 186
I S+ VYG + E L TNPY TK E ++ ++ + R
Sbjct: 120 IFSSSATVYGIPKTLPIT---EEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRY 176
Query: 187 NNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRSYLYCE 229
N +G PN P L+P +A+ L L I G DG+ VR Y++
Sbjct: 177 FNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVV 236
Query: 230 DVAEAFECILHK 241
D+A+ L K
Sbjct: 237 DLAKGHVKALEK 248
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 87/332 (26%), Positives = 133/332 (40%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KG 64
++L+TGAAGF+ +HV L R ++ LD + Y +LK + + FV +G
Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKRARQALLERSGVFVVEG 149
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DI A L+ L +MH AAQ V + N + +NI G LLE CK
Sbjct: 150 DINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQ 209
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 210 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 267
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH---GDGSNVRSYLYCEDVAEAFECILHK 241
R VYGP P+ F ++G + I G+ R + Y +D+ + L
Sbjct: 268 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDT 327
Query: 242 GE--VG-----------HVYNVGTKKERRVIDVAKDICKLFSMDPETSI-KFVENRPFND 287
E G V+N+G V D+ + +L + + +I K N
Sbjct: 328 AEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQF 387
Query: 288 QRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ + LG+ T + GL+K WY
Sbjct: 388 THANISSAQ-RELGYKPTTDLQTGLKKFARWY 418
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 69/246 (28%), Positives = 119/246 (48%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGD 65
+L+TG +G+I SH C +L+++ + +V+LD L C++ ++++P + K FV+GD
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQS--GHDVVILDNL--CNSKRSVLPVIERLSGKQPTFVEGD 58
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I + L+ +L +I+T++HFA V S E+ NN+ GT L+ A + ++
Sbjct: 59 IRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAAN-VK 117
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 176
FI S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPEWSIALL 175
Query: 177 -YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYLY 227
Y PV G+ P P LIP +A+ R L I G D + VR Y++
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIH 235
Query: 228 CEDVAE 233
D+A+
Sbjct: 236 VMDLAD 241
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 82/317 (25%), Positives = 140/317 (44%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKASSNFKFV 62
K LITG G + S + + L+ N +Y+++ + + +D +L + I K
Sbjct: 3 KTALITGFTGQVGSQMADFLLAN-TDYEVIGMMRWQEPMDNIYHLSDRINKK--DRISIF 59
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
D+ + L ++ D I H AAQ++ SF E + NI GT +LE ++
Sbjct: 60 YADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILK 119
Query: 123 QIRRF---IHV-STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
+ +HV S+ EVYG + +E + +PYS +K G + L YG +Y
Sbjct: 120 AKDGYDPVVHVCSSSEVYGRAKVGIKL--NEDTTFHGASPYSISKIGTDYLGRFYGEAYN 177
Query: 179 LPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH--GDGSNVRSYLYCEDVAE 233
+ TR GP + F E + K I L G P+ G+ S+VR++ D
Sbjct: 178 IRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAIR 237
Query: 234 AFECIL---HKGEV--GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR--PFN 286
A+ + KG+V G +N+ ++ ++ +V +I FS + I+ E R P +
Sbjct: 238 AYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVI-EILLSFSTRKDIKIEQDEERLRPID 296
Query: 287 DQRYFLDDQKLTS-LGW 302
D+ K+ S + W
Sbjct: 297 ADYQMFDNTKIKSFINW 313
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 88/334 (26%), Positives = 132/334 (39%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKG 64
++L+TGAAGF+ SH C+ +R + ++ D + Y +LK F V+G
Sbjct: 113 SVLVTGAAGFVGSH-CSLALRKRGD-GVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ L+ L I+H AAQ V + N + +NI G LLE K
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ S+ VYG E+ H Q P + Y+ATK E + Y YGL +
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 288
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN---VRSYLYCEDVAEAFECILHK 241
R VYGP P+ F + G + I+ N R + Y +D+ + L
Sbjct: 289 RFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDT 348
Query: 242 GE--VG-----------HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFN-D 287
E G VYN+G + V + + L + + K + P N D
Sbjct: 349 AEKSTGSGGKKRGQAQLRVYNLGNTSP---VPVGRLVSILEGLLGTKAKKHLIKMPRNGD 405
Query: 288 QRYFLDDQKLT--SLGWSERTIWEEGLRKTIEWY 319
Y + L G+ T GLRK ++WY
Sbjct: 406 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 439
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 208 (78.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 86/338 (25%), Positives = 143/338 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL--IPSKASSNFKFVKGDI 66
+L+TG G+I SH C ++I+ V+LD L Y S + L I +FV+GDI
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQ--AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGDI 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
L+ L+ +I+ ++HFA V S E+ NN+ GT VL+ A + G ++
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-VKS 118
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVI- 182
+ S+ VYGE + E+ NPY +K E + + ++ + + ++
Sbjct: 119 LVFSSSATVYGEPTSVPIT---ESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLR 175
Query: 183 --TTRGNNVYG-----PNQFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYLYC 228
G++ G P P L+P +A+ R L + G DG+ VR Y++
Sbjct: 176 YFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHV 235
Query: 229 EDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSI--KFVENRPFN 286
D+A+ L K ++ + V D+ K F ++ K V+ RP +
Sbjct: 236 MDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVL-DVVKAFETASGRTVPYKLVDRRPGD 294
Query: 287 DQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNP 323
Y+ D K LGW + W + NP
Sbjct: 295 IAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 208 (78.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 86/338 (25%), Positives = 143/338 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL--IPSKASSNFKFVKGDI 66
+L+TG G+I SH C ++I+ V+LD L Y S + L I +FV+GDI
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQ--AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGDI 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
L+ L+ +I+ ++HFA V S E+ NN+ GT VL+ A + G ++
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-VKS 118
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVI- 182
+ S+ VYGE + E+ NPY +K E + + ++ + + ++
Sbjct: 119 LVFSSSATVYGEPTSVPIT---ESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLR 175
Query: 183 --TTRGNNVYG-----PNQFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYLYC 228
G++ G P P L+P +A+ R L + G DG+ VR Y++
Sbjct: 176 YFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHV 235
Query: 229 EDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSI--KFVENRPFN 286
D+A+ L K ++ + V D+ K F ++ K V+ RP +
Sbjct: 236 MDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVL-DVVKAFETASGRTVPYKLVDRRPGD 294
Query: 287 DQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNP 323
Y+ D K LGW + W + NP
Sbjct: 295 IAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 211 (79.3 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 85/333 (25%), Positives = 135/333 (40%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKG 64
++L+TGAAGF+ +HV L R ++ LD + Y ++LK + + F V+G
Sbjct: 93 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEG 150
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DI L+ L +MH AAQ V + N + +NI G LLE CK
Sbjct: 151 DINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQ 210
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 211 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 268
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN----VRSYLYCEDVAEAFECILH 240
R VYGP P+ F ++G + I +G+N R + Y +D+ + L
Sbjct: 269 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIF-EGANHGTVARDFTYIDDIVKGCLGALD 327
Query: 241 KGE--VG-----------HVYNVGTKKERRVIDVAKDICKLFSMDPETSI-KFVENRPFN 286
E G V+N+G V D+ + +L + + ++ K N
Sbjct: 328 TAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVP 387
Query: 287 DQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ + G+ T + GL+K + WY
Sbjct: 388 FTHANISSAQ-REFGYKPSTDLQTGLKKFVRWY 419
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 207 (77.9 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 74/261 (28%), Positives = 114/261 (43%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLK-----NLIPSKASSN 58
P +L+TG AG+I SH ++ Y ++ +D L Y S K + +
Sbjct: 3 PPTVLVTGGAGYIGSHTVLEMLN--AGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKK 60
Query: 59 FKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
F + DI + V + ID + HFAA V S ++ NN+ GT+VLLEA
Sbjct: 61 VNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAM 120
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-Y 177
+ +F++ S+ VYGE V H T+PY TK E ++ +S
Sbjct: 121 -ADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNC--TSPYGKTKYFTEEILKDLCKSDK 177
Query: 178 GLPVITTR-----GNNVYG-----PNQFPEKLIPKFILLAMRGLP-LPIHG------DGS 220
V++ R G ++ G PN P L+P +A+ P L ++G DG+
Sbjct: 178 RWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGT 237
Query: 221 NVRSYLYCEDVAEAFECILHK 241
VR Y++ D+AE L K
Sbjct: 238 GVRDYIHIVDLAEGHVKALDK 258
Score = 40 (19.1 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 584 RNLRGIWNFT-NPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVA 631
RN+ F N G +L+M K + K VN+TL ++ VA
Sbjct: 260 RNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVA 308
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 182 (69.1 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 51/164 (31%), Positives = 81/164 (49%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCSNLKNLIPSKASSNFKFVKGDIA 67
IL+TG AG+I SH LI + YK++++D L + C + + + KF K D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINH--GYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLR 65
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + + T I ++HFAA V S E+ NNI GT LL + +++
Sbjct: 66 DKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMR-EHRVKTV 124
Query: 128 IHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
+ S+ VYG+ T D ++ E+ PTNPY TK E ++
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENII 168
Score = 64 (27.6 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 34/147 (23%), Positives = 57/147 (38%)
Query: 192 PNQFPEKLIPKFILLAM-RGLPLPIHGD------GSNVRSYLYCEDVAEAFECIL-HKGE 243
P P L+P +A+ R L + GD G+ +R Y++ D+A+ L + +
Sbjct: 201 PLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDYIHVVDLAKGHIAALNYLNK 260
Query: 244 VGH---VY---NVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL 297
+ + +Y N+GT K V D+ CK D + V R + +
Sbjct: 261 INNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPYEV--VGRRTGDVLNLTASPNRA 318
Query: 298 TS-LGWSERTIWEEGLRKTIEWYTQNP 323
S L W + R +W +NP
Sbjct: 319 NSELKWKAELSITDACRDLWKWTIENP 345
Score = 59 (25.8 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 27/113 (23%), Positives = 48/113 (42%)
Query: 489 EYDAAHPEGSGIGYKEEDTPNFT-GSFYSKTKAMVEELLKEYDNVCTLRVRMPIS---SD 544
EY + PE S + + N + + S K + ++K NV L+V S D
Sbjct: 511 EYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKSTTNVY-LKVNSETSLPTGD 569
Query: 545 LNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGV 597
+ +N ITK ++ + ++ N V E ++ K +L+ I +P V
Sbjct: 570 IVEWQNDITKPTKLDPNISFDNCFIVDREASKFCLDTRKYSLKNIVEVIHPSV 622
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 204 (76.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 72/264 (27%), Positives = 114/264 (43%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----SNLKNLIPSKA 55
M + +NIL+TG AGFI +H +L+ +K+ ++D LD ++ L+
Sbjct: 1 MGSSVEQNILVTGGAGFIGTHTVVQLLNQ--GFKVTIIDNLDNSVVEAVHRVRELVGPDL 58
Query: 56 SSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
S+ +F GD+ + + L + D ++HFA V S GN + NN+ GT L
Sbjct: 59 STKLEFNLGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLY 118
Query: 116 EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYG 174
E + + S+ VYG+ + +V E +L NPY TK E + +
Sbjct: 119 ETM-AKYNCKMMVFSSSATVYGQPE---IVPCVEDFELQAMNPYGRTKLFLEEIARDIHA 174
Query: 175 RSYGLPVITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------ 217
+I R N G P P L+P +A+ LP L + G
Sbjct: 175 AEPEWKIILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTM 234
Query: 218 DGSNVRSYLYCEDVAEAFECILHK 241
DGS VR Y++ D+A+ L+K
Sbjct: 235 DGSAVRDYIHVMDLADGHVAALNK 258
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 199 (75.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 153 LLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-FP-EK------LIPKF 203
L PTN Y+ K L +Y R YG I N+YGPN F EK LI KF
Sbjct: 130 LEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHVLPALIRKF 189
Query: 204 ILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVA 262
+ G P + + G G+ +R +++ +DVA+A ++ E + N+G+ +E + D+A
Sbjct: 190 HEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHEGNDIVNIGSGEEISIRDLA 249
Query: 263 KDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ K+ + E + F ++P R D +L SLGW R E+G+R+T EW+
Sbjct: 250 L-LVKIV-VGFEGELVFDASKPDGTPRKLSDVSRLHSLGWRHRIGLEDGVRETYEWF 304
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 86/332 (25%), Positives = 129/332 (38%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KGD 65
+L+TGA+GF+ +HV L R ++ LD + Y LK + FV +GD
Sbjct: 98 VLVTGASGFVGTHVSIALRRRGDG--VLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGD 155
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I A L+ L +MH AAQ V + N + +NI G LLE K
Sbjct: 156 INDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQP 215
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ S+ VYG + Q P + Y+ATK E + Y YGL + R
Sbjct: 216 AIVWASSSSVYGLNSKVPFSEKDRTDQ--PASLYAATKKAGEGIAHTYNHIYGLSLTGLR 273
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD---GSNVRSYLYCEDVAEAFECILHKG 242
VYGP P+ F ++G + + GS R + Y +D+ + L
Sbjct: 274 FFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTA 333
Query: 243 E--VG-----------HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
E G +YN+G V + + KL M + I + D
Sbjct: 334 EKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRN--GDVE 391
Query: 290 YFLDDQKLTS--LGWSERTIWEEGLRKTIEWY 319
+ + L LG+ E GL+K ++WY
Sbjct: 392 FTHANITLAQAELGYKPAVDLETGLKKFVKWY 423
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 87/343 (25%), Positives = 138/343 (40%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIA 67
IL+TG AG+I +H L+ E ++VLD L S + + + F +GDI
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSE--VIVLDNLSNSSIEALDRVERITGKSVTFYQGDIL 60
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--IR 125
+ L+ + SID ++HFA V S ++ +NN+ GT +L C+V + ++
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLIL---CQVMAEFKVK 117
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 176
+ S+ VYG+ + + TNPY +K E ++ S
Sbjct: 118 NLVFSSSATVYGDPASLPITEDFPTGA---TNPYGQSKLMVEHILADLHHSDPSWNIARL 174
Query: 177 -YGLPVITTRGNNVYG--PNQFPEKLIPKFIL---------LAMRGLPLPIHGDGSNVRS 224
Y PV + + G PN P L+P FI L++ G P H DG+ VR
Sbjct: 175 RYFNPV-GAHASGLIGEDPNDIPNNLMP-FIAQVAVGKREALSVFGNDYPTH-DGTGVRD 231
Query: 225 YLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV--EN 282
Y++ D+A L K + V D+ K F SI ++
Sbjct: 232 YIHVVDLAIGHLKALEKLATKPGLVTYNLGTGQGYSVL-DMVKAFEKACGKSIAYLIAPR 290
Query: 283 RPFNDQRYFLD-DQKLTSLGWSERTIWEEGLRKTIEWYTQNPD 324
RP + + D D T L W E+ + W + NP+
Sbjct: 291 RPGDIAACYADPDHAKTDLDWQATHSLEDMANSSWHWQSTNPN 333
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 72/273 (26%), Positives = 117/273 (42%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDI 66
++LITG G+I SH L+++ E +IV++D L S + I + F+K D+
Sbjct: 2 SLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKADV 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + + I+ ++HFA V S + +NN+ GT LL Q++
Sbjct: 62 CDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVM-AKYQVKN 120
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---------- 176
+ S+ VYG V +E TNPY TK E ++ +S
Sbjct: 121 LVFSSSATVYGNN----VSPLNETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACLR 176
Query: 177 YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMRGLP-LPIHGD------GSNVRSYLYC 228
Y P+ + + PN P L+P +A+ L L I GD G+ VR Y++
Sbjct: 177 YFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIHV 236
Query: 229 EDVAEAFECILHKGEVGHVYNVGTKKERRVIDV 261
D+A+ L +GH GT K + I++
Sbjct: 237 VDLAQGHVKALES--LGHAK--GTVKGCQAINL 265
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 208 (78.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 68/244 (27%), Positives = 114/244 (46%)
Query: 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-----KLDYCSNLKNLIPSKAS 56
AT T + ++TG GF A H+ L+R Y + + + D LD L S
Sbjct: 5 ATETERWCVVTGGRGFAARHLVEMLVR-YEMFCVRIADLAPAIMLDPQEGNGVLDEGLRS 63
Query: 57 SNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVLL 115
+++ D+ V + + + + H AA D+S N +++ N + GT ++
Sbjct: 64 GRVQYISADLRDKSQV--VKAFQGAEVVFHMAAP---DSSINNHQLQYSVN-VQGTQNVI 117
Query: 116 EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-YSATKA-GAEMLVMAY 173
+AC G ++R I+ S+ V + + G + + N YSATKA G E+++ A
Sbjct: 118 DACVDVG-VKRLIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKAN 176
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
GR+ GL R ++++GP L+P + A G I GDG+N+ + Y E+VA
Sbjct: 177 GRN-GLLTCCIRPSSIFGPGD--RLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVAH 233
Query: 234 AFEC 237
A C
Sbjct: 234 AHVC 237
Score = 38 (18.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 300 LGWSERTIWEEGLRKTIEWYT 320
LG++ +EG+R+TI+ ++
Sbjct: 339 LGYAPVVPLQEGIRRTIDSFS 359
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 200 (75.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 71/245 (28%), Positives = 111/245 (45%)
Query: 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
T T + ++TG GF A H+ L+R Y + + + D + +
Sbjct: 6 TETERWCVVTGGRGFAARHLVEMLVR-YQMFHVRIADLAPAIVLNPHEETGILGEAIRSG 64
Query: 63 KGDIASADLVNFLLITESI---DTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVLLEAC 118
+ SADL N + + + + H AA D+S N +++ N + GT +++AC
Sbjct: 65 RVQYVSADLRNKTQVVKGFQGAEVVFHMAAP---DSSINNHQLQYSVN-VQGTTNVIDAC 120
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-----YSATKAGAEMLVM-A 172
G ++R I+ S+ V D V G A + LP P YSATKA E L++ A
Sbjct: 121 IEVG-VKRLIYTSSPSVVF----DGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKA 175
Query: 173 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
GRS GL R ++++GP + ++P + A G I GDGSN + Y E+V
Sbjct: 176 NGRS-GLLTCCIRPSSIFGPGD--KLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232
Query: 233 EAFEC 237
A C
Sbjct: 233 HAHVC 237
Score = 39 (18.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 289 RYFLDDQKLTSLGWSERTIWEEGLRKTIEWYT 320
R F + LG+S +EG+++TI+ ++
Sbjct: 328 RTFDSSKAKDRLGYSPVVPLQEGIKRTIDSFS 359
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 189 (71.6 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 67/264 (25%), Positives = 113/264 (42%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----SNLKNLIPSKA 55
M + +NIL+TG AGFI +H +L+++ +K+ ++D D ++ L+
Sbjct: 1 MGSSVEQNILVTGGAGFIGTHTVVQLLKD--GFKVSIIDNFDNSVIEAVDRVRELVGPDL 58
Query: 56 SSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
S F GD+ + + L + D ++HFA V S N + NN+ GT L
Sbjct: 59 SKKLDFNLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLY 118
Query: 116 EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
E + + S+ VYG+ ++ + + E + NPY TK E + +
Sbjct: 119 ETM-AKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAM---NPYGRTKLFLEEIARDIQK 174
Query: 176 S----------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMRGLP-LPIHG------ 217
+ Y PV ++ P P L+P +A+ LP L ++G
Sbjct: 175 AEPEWRIILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTE 234
Query: 218 DGSNVRSYLYCEDVAEAFECILHK 241
DGS VR Y++ D+A+ L K
Sbjct: 235 DGSAVRDYIHVMDLADGHIAALRK 258
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 168 (64.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 55/170 (32%), Positives = 80/170 (47%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD---YCSNLKNLIPSKASSNFKF 61
T K +L+TG AG+I SH LI N Y VV D L Y S + + +K + F
Sbjct: 10 TSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTK--HHIPF 65
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+ D+ + + ID+++HFA V S + NNI GT VLLE +
Sbjct: 66 YEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY 125
Query: 122 GQIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
+ +F+ S+ VYG+ T ++ E L PTNPY TK E ++
Sbjct: 126 N-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENIL 174
Score = 72 (30.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 43/181 (23%), Positives = 68/181 (37%)
Query: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHG 217
Y++ K + ++ Y G G + G P L+P +A+ R L I G
Sbjct: 178 YNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLG---IPNNLLPYMAQVAVGRREKLYIFG 234
Query: 218 D------GSNVRSYLYCEDVAEAFECILHKGEV-----G--HVYNVGTKKERRVIDVAKD 264
D G+ +R Y++ D+A+ L E G +N+G+ K V +V
Sbjct: 235 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHA 294
Query: 265 ICKLFSMDPETSIKFVENRPFNDQRYFL--DDQKLTSLGWSERTIWEEGLRKTIEWYTQN 322
CK +D K V R D D+ L W E+ + +W T+N
Sbjct: 295 FCKASGID--LPYK-VTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 351
Query: 323 P 323
P
Sbjct: 352 P 352
>TIGR_CMR|CPS_0589 [details] [associations]
symbol:CPS_0589 "sugar epimerase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0005975
"carbohydrate metabolic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 RefSeq:YP_267339.1
ProteinModelPortal:Q489C5 STRING:Q489C5 GeneID:3522305
KEGG:cps:CPS_0589 PATRIC:21464507 HOGENOM:HOG000167991 OMA:CAARAHI
BioCyc:CPSY167879:GI48-676-MONOMER Uniprot:Q489C5
Length = 321
Score = 183 (69.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 73/237 (30%), Positives = 106/237 (44%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK-FVKGDIA 67
I ITGA GF+ + L + + I + L+NL S+ +N V GDI
Sbjct: 3 IAITGATGFLGKPLTKELSERFCDDSIAPI--------LRNL--SQEFNNVNCIVVGDIG 52
Query: 68 S-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNS--FEFTKNNIYGTHVLLEACKVTGQI 124
D N L E I ++H AA+ HV N F + N+ GT V +A +G +
Sbjct: 53 PMTDWSNKL---EDIGCVIHCAARVHVMNEKNEDPLDAFREVNVRGTLVFAKAAAKSG-V 108
Query: 125 RRFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+RFI VS+ +V GE T + + E S P +PY +K+ AE + G+ V+
Sbjct: 109 KRFIFVSSIKVNGESTTSKKPYKNSDEPS---PKDPYGISKSEAEAGLKLIADETGMEVV 165
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECI 238
R VYGP + + A G+PLP N RS +Y E++ ECI
Sbjct: 166 IIRPPLVYGPGV--KANFAAMLKFASTGIPLPFGCISHNKRSMVYVENLISLIVECI 220
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 185 (70.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 65/248 (26%), Positives = 117/248 (47%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
PK +L+TGA F+ ++ RL +N +++ +D + + K+++ + +FV+ D
Sbjct: 23 PKVVLVTGACRFLGGYLTARLAQNPLINRVIAVDAI---APSKDML--RRMGRAEFVRAD 77
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I + + + E +DT++H AA ++ S G S + N+ G L AC+ +R
Sbjct: 78 IRNPFIAKVIRNGE-VDTVVHAAAASYAPRS-GGSAALKELNVMGAMQLFAACQKAPSVR 135
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATKAGAEMLVMAYGRSY-GLPVIT 183
R + ST EVYG + D V+ ++S P + + E V A GR + V
Sbjct: 136 RVVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTI 195
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
R N+ GP + + ++ LA +P I G + ++ L+ +D A E G+
Sbjct: 196 LRLANMIGPAM--DTTLSRY--LAGPLVPT-IFGRDARLQ-LLHEQDALGALERAAMAGK 249
Query: 244 VGHVYNVG 251
G +N+G
Sbjct: 250 AG-TFNIG 256
>ASPGD|ASPL0000028763 [details] [associations]
symbol:AN11081 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BN001305
ProteinModelPortal:C8VEF0 EnsemblFungi:CADANIAT00002923 OMA:WIAVITE
Uniprot:C8VEF0
Length = 364
Score = 169 (64.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 67/256 (26%), Positives = 107/256 (41%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+LITG GFIA H+ +L+ P I +D + +N+ AS + + +GD++S
Sbjct: 9 VLITGGNGFIAYHIIAKLLAEDPNCTIHCID----INTTRNI---HASDSVTYHQGDLSS 61
Query: 69 -ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY--GTHVLLEACKVTGQIR 125
AD+ + + + TI H A+ F + E +++ GTH LL + G ++
Sbjct: 62 LADVSRIMELARPV-TIFHTASP-----EFSEAPESAYHDVIVTGTHHLLNSAASIGTVK 115
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGLPVI 182
I+ ST V + D V G + L P Y KA AE + A R +G
Sbjct: 116 ALINTSTSGVINDNHTDLVNGTEDMPILRPPVQKRLYCLAKADAEEAIQAANRQHGFLTC 175
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R +G + K + +A G G G N ++Y ++A+A H
Sbjct: 176 ALRPCLAFGERD--TNSMGKMVAVARAGRSRFQMGYGKNAYDFVYVGNLADAHLLAAHAL 233
Query: 243 EVGHVYNVGTKKERRV 258
H N +RRV
Sbjct: 234 IDAHA-NPPLPADRRV 248
Score = 59 (25.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 300 LGWSERTIWEEGLRKTIEWYTQNPD 324
LG+ R +EG+ + + W+ +NP+
Sbjct: 337 LGYQPRVGMQEGIERGVRWFKENPE 361
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 182 (69.1 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 82/335 (24%), Positives = 152/335 (45%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
TP IL+TGA+GF+ V + +N Y +V + S+ +F+ V
Sbjct: 7 TPLKILVTGASGFVGLRVLTQA-QNIG-YALVAQSR------------SQQPYSFEQVLL 52
Query: 65 DIA-SADLVNFLLITESIDTIMHFAAQTH-VDNSFGNSFEFTKN-NIYGTHVLLEACKVT 121
DI + D L+ +D ++H AA+ H + + ++ + ++ N GT L + V+
Sbjct: 53 DITPNTDWERALV---GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQA-VS 108
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
++RFI +S+ +V GE + H+ Q +P++PY +K AE ++ GL V
Sbjct: 109 AGVKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAETGLEV 167
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILH 240
+ R VYG L + + +PLP+ G N+RS +Y +++ + C H
Sbjct: 168 VIIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILVCCQH 224
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDP------ETSIKFVEN---RPFNDQRYF 291
G ++ V + + + + I + + P +T ++++ +P QR
Sbjct: 225 PKAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELGQRLC 284
Query: 292 ----LD---DQKLTSLGWSERTIWEEGLRKTIEWY 319
LD QK +L WS +E+G+ +T+ +Y
Sbjct: 285 GNLQLDIAHTQK--TLHWSPPVSFEQGIARTVNFY 317
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 182 (69.1 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 82/335 (24%), Positives = 152/335 (45%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
TP IL+TGA+GF+ V + +N Y +V + S+ +F+ V
Sbjct: 7 TPLKILVTGASGFVGLRVLTQA-QNIG-YALVAQSR------------SQQPYSFEQVLL 52
Query: 65 DIA-SADLVNFLLITESIDTIMHFAAQTH-VDNSFGNSFEFTKN-NIYGTHVLLEACKVT 121
DI + D L+ +D ++H AA+ H + + ++ + ++ N GT L + V+
Sbjct: 53 DITPNTDWERALV---GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQA-VS 108
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
++RFI +S+ +V GE + H+ Q +P++PY +K AE ++ GL V
Sbjct: 109 AGVKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAETGLEV 167
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILH 240
+ R VYG L + + +PLP+ G N+RS +Y +++ + C H
Sbjct: 168 VIIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILVCCQH 224
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDP------ETSIKFVEN---RPFNDQRYF 291
G ++ V + + + + I + + P +T ++++ +P QR
Sbjct: 225 PKAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELGQRLC 284
Query: 292 ----LD---DQKLTSLGWSERTIWEEGLRKTIEWY 319
LD QK +L WS +E+G+ +T+ +Y
Sbjct: 285 GNLQLDIAHTQK--TLHWSPPVSFEQGIARTVNFY 317
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 70/259 (27%), Positives = 107/259 (41%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNL--IPSKASSNFKFV 62
+N+L++G AG+I SH +L+ Y +VV+D LD S +L+ + + ++ F
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLG--GYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFH 61
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ D+ + + D ++HFA V S + NN+ GT LLE G
Sbjct: 62 QVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHG 121
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPV 181
+ + S+ VYG E S L NPY TK E + YG +
Sbjct: 122 -CKNLVFSSSATVYGSPKEVPCTEEFPISAL---NPYGRTKLFIEEICRDVYGSDPEWKI 177
Query: 182 ITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
I R N G P P L+P +A+ P L + G DG+ VR
Sbjct: 178 ILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRD 237
Query: 225 YLYCEDVAEAFECILHKGE 243
Y++ D+A+ L K E
Sbjct: 238 YIHVIDLADGHIAALRKLE 256
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 185 (70.2 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 72/252 (28%), Positives = 106/252 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIA 67
IL+TG AG+I SH LI N YK+V++D L S + I + F DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIR 63
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + +N + I ++HFAA V S + NN+ GT LLE CK ++
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKAN-DVKTI 122
Query: 128 IHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPVIT 183
+ S+ VYG+ +++++ E + PTNPY TK E ++ Y V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 184 TRGNNVYG----------PNQFPEKLIPKFILLAM-RGLPLPIHGDGSNVRSYLYCEDVA 232
R N G P P L+P +A+ R L I G+ N R D
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 233 EAFECILHKGEV 244
+ L KG +
Sbjct: 243 HVVD--LAKGHI 252
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 185 (70.2 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 72/252 (28%), Positives = 106/252 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIA 67
IL+TG AG+I SH LI N YK+V++D L S + I + F DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIR 63
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + +N + I ++HFAA V S + NN+ GT LLE CK ++
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKAN-DVKTI 122
Query: 128 IHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPVIT 183
+ S+ VYG+ +++++ E + PTNPY TK E ++ Y V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 184 TRGNNVYG----------PNQFPEKLIPKFILLAM-RGLPLPIHGDGSNVRSYLYCEDVA 232
R N G P P L+P +A+ R L I G+ N R D
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 233 EAFECILHKGEV 244
+ L KG +
Sbjct: 243 HVVD--LAKGHI 252
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 82/322 (25%), Positives = 132/322 (40%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I ITGA GFIASH+ RL ++ Y I D+ N +++ F V D+
Sbjct: 30 ISITGAGGFIASHIARRL-KHEGHYVIAS----DWKKN-EHMTEDMFCDEFHLV--DLRV 81
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ N L +TE +D + + AA N NN + ++EA ++ G I+RF
Sbjct: 82 ME--NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRF 138
Query: 128 IHVSTDEVYGETDE-DAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPVIT 183
+ S+ +Y E + + + + S P P Y K E L Y + +G+
Sbjct: 139 FYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRI 198
Query: 184 TRGNNVYGP----NQFPEKLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECI 238
R +N+YGP EK F A + GDG RS+ + ++ E
Sbjct: 199 GRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV-LR 257
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVEN-RPFNDQRYFLDDQK 296
L K + N+G+ + + ++A+ + P I E R N + ++
Sbjct: 258 LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEK- 316
Query: 297 LTSLGWSERTIWEEGLRKTIEW 318
LGW+ +EGLR T W
Sbjct: 317 ---LGWAPNMRLKEGLRITYFW 335
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 72/257 (28%), Positives = 109/257 (42%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNL--IPSKASSNFKFV 62
K++L+TG AG+I SH +L+ Y VV+D D S +L+ + + + + F
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEG--GYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFH 60
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ D+ + + D ++HFA V S + NNI GT LLE G
Sbjct: 61 QVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYG 120
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPV 181
+ + S+ VYG E V E S + TNPY TK E + RS +
Sbjct: 121 -CKNLVFSSSATVYGWPKE---VPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKI 176
Query: 182 ITTRGNNVYG--PNQF--------PEKLIPKFILLAMRGLP-LPIHG------DGSNVRS 224
I R N G P+ + P L+P +A+ P L + G DG+ VR
Sbjct: 177 ILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRD 236
Query: 225 YLYCEDVAEAFECILHK 241
Y++ D+A+ L K
Sbjct: 237 YIHVMDLADGHIAALRK 253
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 73/314 (23%), Positives = 145/314 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AG++ S + +L+ Y++ V D L + + +P K + V+GDI
Sbjct: 8 ILVTGGAGYVGSALVPQLLEL--GYRVTVYDTLFFGDDF---LP-KENPYLNIVEGDIRD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFG-NSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + + D ++ A ++ D SF + T N+ +++A K G ++RF
Sbjct: 62 TERLKQCF--KDADAVISLACISN-DASFELDETLSTSINLEAFEPMVKAAKAAG-VKRF 117
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
I+ S+ VYG ++ V H L+P Y+ K E L+ + +S +T R
Sbjct: 118 IYASSSSVYGVSETKDVTEEHP---LVPLTLYNKYKGMCEPLLFKH-QSPEFVCVTIRPA 173
Query: 188 NV--YGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-- 243
+ Y P Q + + A+ + + G GS +R L+ +D+ + ++ +L +
Sbjct: 174 TLCGYAPRQRLDLSVNILTNHAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEK 232
Query: 244 -VGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFNDQR-YFLDDQKLTS- 299
G +NVG + + ++++A + + + PE + + P +D R Y ++ K+
Sbjct: 233 IAGETFNVGYEN-KSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRC 291
Query: 300 LGWSERTIWEEGLR 313
LG+ + E+ +R
Sbjct: 292 LGFEAKYSIEDAVR 305
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 175 (66.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 74/258 (28%), Positives = 107/258 (41%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNL--IPSKASSNFKFVK 63
NIL+TG AG+I SH +L+ Y VV+D LD S +++ + + N +
Sbjct: 4 NILVTGGAGYIGSHTVLQLLLG--GYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D+ + + D +MHFA V S + NN+ T LLE G
Sbjct: 62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHG- 120
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP--- 180
++ + S+ VYG E V E S L +PY TK E + R G P
Sbjct: 121 CKKLVFSSSATVYGWPKE---VPCTEESPLSGMSPYGRTKLFIEDICRDVQR--GDPEWR 175
Query: 181 VITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVR 223
+I R N G P P L+P + + LP L I+G DG+ VR
Sbjct: 176 IIMLRYFNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVR 235
Query: 224 SYLYCEDVAEAFECILHK 241
Y++ D+A+ C L K
Sbjct: 236 DYIHVVDLADGHICALQK 253
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 42/144 (29%), Positives = 64/144 (44%)
Query: 196 PEKLIPKFILLAMRGLP-LPIHG------DGSNVRSYLYCEDVAEAFECILHK---GEVG 245
P L+P + + LP L I+G DG+ VR Y++ D+A+ C L K E+G
Sbjct: 201 PNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVDLADGHICALQKLDDTEIG 260
Query: 246 -HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWS 303
VYN+GT K V+++ K M + + V RP + + + +K L W
Sbjct: 261 CEVYNLGTGKGTTVLEMVDAFEKASGM--KIPLVKVGRRPGDAETVYASTEKAERELNWK 318
Query: 304 ERTIWEEGLRKTIEWYTQNPDWWG 327
EE R W + NP +G
Sbjct: 319 ANFGIEEMCRDQWNWASNNPFGYG 342
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 66/268 (24%), Positives = 127/268 (47%)
Query: 69 ADLVNFLLITESIDTIMHFA--AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
AD+ +F + + I+ A H +N++ F I T+V+ A + G +++
Sbjct: 58 ADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSAYE-HG-VKK 114
Query: 127 FIHVSTDEVYGETDEDAVVGNHE-ASQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITT 184
+ + + +Y + + + + L PTN Y+ K AY +G I+
Sbjct: 115 LLFLGSSCIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISG 174
Query: 185 RGNNVYGPNQ-F-PEK--LIP----KFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAF 235
N+YGPN F PE ++P +F + G + + G GS +R +L+ +D+A+A
Sbjct: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADAC 234
Query: 236 ECILHK-GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDD 294
+L + + HV N+G+ +E + ++A+ + ++ E + + +P R +D
Sbjct: 235 VFLLDRYSGLEHV-NIGSGQEVTIRELAELVKEVVGF--EGKLGWDCTKPDGTPRKLMDS 291
Query: 295 QKLTSLGWSERTIWEEGLRKTIEWYTQN 322
KL SLGW+ + +GL +T +WY +N
Sbjct: 292 SKLASLGWTPKVSLRDGLSQTYDWYLKN 319
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 113 (44.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F------PEKLIPKFILLAMRGL 211
Y+ K E LV A G GL R N GP F P + +P+ + L
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 212 ----PLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV--GHVYNVGT-KKERRVIDVAKD 264
PL + G + R+++Y +D EA ++ E GH++NVG E V +A+
Sbjct: 245 LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 265 ICKLFS-MDPETSIKF----VENRPFNDQRYFLDDQKLTS-------LGWSERT-IWE 309
+ ++++ + ET+I+ V ++ F + Y D+++ LGW+ +T +W+
Sbjct: 305 MTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWD 362
Score = 110 (43.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 41/150 (27%), Positives = 68/150 (45%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI-PSKA--SSNFKFV 62
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L+ P + +F
Sbjct: 17 PMTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVQWAGRIQFH 73
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ +I + L+ + TI A T D + + +N +++ C
Sbjct: 74 RINIKHDSRLEGLIKMADL-TINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSENN 131
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152
+R IH ST EVYG+T + +H Q
Sbjct: 132 --KRLIHFSTCEVYGKTIGSFLPKDHPLRQ 159
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 116 (45.9 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI-PSKA--SSNFKFV 62
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L+ P S +F
Sbjct: 17 PLTICMIGAGGFIGSHLCEKLLTETP-HKVLALDV--YNDKIKHLLEPDTVEWSGRIQFH 73
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQ-THVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+ +I + L+ + D I++ AA T D + + +N +++ C
Sbjct: 74 RINIKHDSRLEGLV--KMADLIINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSEN 130
Query: 122 GQIRRFIHVSTDEVYGET 139
+R IH ST EVYG+T
Sbjct: 131 N--KRLIHFSTCEVYGKT 146
Score = 104 (41.7 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F------PEKLIPKFILLAMRGL 211
Y+ K E LV A G GL R N GP F P + +P+ + L
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 212 ----PLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV--GHVYNVGT-KKERRVIDVAKD 264
PL + G + R+++Y D EA ++ E GH++NVG E V +A+
Sbjct: 245 LRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 265 ICKLFS-MDPETSIKF----VENRPFNDQRYFLDDQKLTS-------LGWSERT-IWE 309
+ ++++ + E +I+ V ++ F + Y D+++ LGW+ +T +W+
Sbjct: 305 MTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWD 362
>TIGR_CMR|SO_3173 [details] [associations]
symbol:SO_3173 "UDP-galactose 4-epimerase, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 HOGENOM:HOG000167991
RefSeq:NP_718729.1 ProteinModelPortal:Q8ECG9 GeneID:1170867
KEGG:son:SO_3173 PATRIC:23526030 OMA:HAMSGAP Uniprot:Q8ECG9
Length = 309
Score = 162 (62.1 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 59/216 (27%), Positives = 99/216 (45%)
Query: 53 SKASSNFKFVKGDI-ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE--FTKNNIY 109
+K + + F G++ A+ D + L +D ++H AA+ HV N N+ + + N
Sbjct: 33 TKPARDCHFFAGELTANTDYRSAL---SGVDVVIHCAARAHVMNETANNAAQLYQEVNTL 89
Query: 110 GTHVLLEACKVTGQIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEM 168
T L E G ++RFI +ST +V GE T + +A Q P + Y +KA AE+
Sbjct: 90 VTLALAEQAAAAG-VKRFIFISTIKVNGEATIAGQLFRASDARQ--PLDHYGESKAKAEI 146
Query: 169 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228
+ R + V+ R VYGPN + + LA + LPLP G N RS +
Sbjct: 147 GLFDIARKTEIEVVIIRPPLVYGPNV--KANFATMLNLAKKNLPLPF-GAIHNKRSMVAL 203
Query: 229 EDVAEAF-ECILHKGEVGHVYNVGTKKERRVIDVAK 263
+++ + CI H ++ V ++ ++ K
Sbjct: 204 DNLVDLIVTCIEHPNAANQIFLVSDDQDVSTTELLK 239
Score = 49 (22.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 7 KNILITGAAGFIASHVCNRL 26
++IL+TGA GF+ + +L
Sbjct: 4 QSILLTGATGFVGQQILRQL 23
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 59/245 (24%), Positives = 112/245 (45%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG+ G++ + +C+ L+R + +V S+L +L P ++A
Sbjct: 15 ILVTGSTGYLGARLCHVLLRRGHSVRALVRRT----SDLSDLPPEV----------ELAY 60
Query: 69 ADLVNFLLITESI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
D+ ++ +T++ D + H AA V+ + F N+ G +LEA K T ++
Sbjct: 61 GDVTDYRSLTDACSGCDIVFHAAAL--VEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQ 118
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ I+ S+ G TD N ++ Y +KA A+ + + S G+P+I
Sbjct: 119 KIIYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALN-AASEGVPIILLY 177
Query: 186 GNNVYGPNQFPE-KLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
++GP + ++ + ++ G LP I G G++ S+ + +DV E + KG
Sbjct: 178 PGVIFGPGKLTSANMVARMLIERFNGRLPGYI-GSGTDRYSFSHVDDVVEGHVAAMEKGR 236
Query: 244 VGHVY 248
+G Y
Sbjct: 237 LGERY 241
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 154 (59.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 52/169 (30%), Positives = 81/169 (47%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPSKASSNFKFVKGD 65
++L+TG G+I S L+ YK+VV D L Y S+ + N I + +F + D
Sbjct: 5 SVLVTGGTGYIGSFTTLALLE--AGYKVVVADNL-YNSSAEALNRIELISGKKAEFAQLD 61
Query: 66 IASADLVNFLLITES---IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ D F + E+ ID+++HFAA V S ++ N+YGT LL + V
Sbjct: 62 VT--DEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSM-VRH 118
Query: 123 QIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
+ + S+ VYG+ T ++ E L PTNPY TK E+ +
Sbjct: 119 NVTNIVFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAI 167
Score = 59 (25.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 27/113 (23%), Positives = 47/113 (41%)
Query: 218 DGSNVRSYLYCEDVAEA-FECI--LHKGEVG-HVYNVGTKKERRVIDVAKDICKLFSMDP 273
DG+ +R Y++ D+A+ + + L G +N+GT + V ++ + K D
Sbjct: 246 DGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDL 305
Query: 274 ETSIKFVENRPFNDQRYFLDD--QKLTSLGW-SERTIWEEGLRKTIEWYTQNP 323
V R D + + T LGW ++RT+ E+ W NP
Sbjct: 306 PYE---VAPRRAGDVLNLTSNPTRANTELGWKAQRTL-EQACEDLWLWTKNNP 354
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 159 (61.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 57/231 (24%), Positives = 102/231 (44%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
++LI G +GF+ H+ + P+ I + D D L + KF KGD+
Sbjct: 6 SVLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVD-DIKFHKGDLT 64
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
S D + + + ++H A+ H N + ++ N+ GT +++ CK G +
Sbjct: 65 SPDDMENAINESKANVVVHCASPMHGQNP--DIYDIV--NVKGTRNVIDMCKKCG-VNIL 119
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAE-MLVMAYGRSYGLPVIT 183
++ S+ V + V N + + +P P Y+ TKA AE M++ A S +
Sbjct: 120 VYTSSAGVIFNGQD---VHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFYTVA 176
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R ++GP +L+P +A G GD +N+ + Y +VA+A
Sbjct: 177 LRPAGIFGPGD--RQLVPGLRQVAKLGQSKFQIGDNNNLFDWTYAGNVADA 225
Score = 50 (22.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG++ R EEG+ KT+ W
Sbjct: 326 LGYTPRVGIEEGINKTLAW 344
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 160 (61.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 47/166 (28%), Positives = 77/166 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIPSKASSNFKFVKGD 65
+L+TG AG+I SH C L+ Y +V++D L C++ + I F + D
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEK--GYDVVIVDNL--CNSRVEAVHRIEKLTGKKVIFHQVD 64
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ ++ + ++I ++HFA V S + KNNI GT L+E C +R
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIE-CMKKYNVR 123
Query: 126 RFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
F+ S+ VYG+ T + E+ T+PY TK E ++
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENII 169
Score = 49 (22.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 192 PNQFPEKLIPKFILLAMRGLP-LPIHGD------GSNVRSYLYCEDVAEA 234
P P L+P +A+ L L + GD G+ +R Y++ D+AEA
Sbjct: 202 PLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYIHVCDLAEA 251
>UNIPROTKB|O05349 [details] [associations]
symbol:RfbU "Mannosyl-transferase" species:666 "Vibrio
cholerae" [GO:0000030 "mannosyltransferase activity" evidence=ISS]
[GO:0009243 "O antigen biosynthetic process" evidence=ISS]
InterPro:IPR003869 Pfam:PF02719 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:AE003852_GR GO:GO:0000030
GO:GO:0009243 EMBL:Y07788 PIR:B82345 ProteinModelPortal:O05349
DNASU:2614878 PATRIC:20079562 ProtClustDB:CLSK793548 Uniprot:O05349
Length = 621
Score = 139 (54.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL------IPSKASSN 58
T K++++TGA G I S +C +++ P+ +V+ + +Y NL + I N
Sbjct: 280 TEKSVMVTGAGGSIGSELCRQILAQKPK-TLVLFELNEY--NLYTIDQELQAIKQNLKLN 336
Query: 59 FKFVK--GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 116
K V G + + V L+ ++T+ H AA HV N E +NN++GT
Sbjct: 337 TKIVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAN 396
Query: 117 ACKVTGQIRRFIHVSTDEVYGETD 140
A G ++ F +STD+ T+
Sbjct: 397 AAIEAG-VKNFTLISTDKAVRPTN 419
Score = 77 (32.2 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 155 PTNPYSATKAGAEMLVMAYGRSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMRGLPL 213
PTN A+K AE+++ A + T R NV G + ++P F G P+
Sbjct: 417 PTNIMGASKRMAELVLQALADKNSTTIFTMVRFGNVLGSSG---SVVPLFKKQIRAGGPV 473
Query: 214 PI-HGDGSNVRSYLYCEDVAEAFECILHKGEVGH---VYNVGTKKERRVIDVAKDICKLF 269
+ H D +R ++ + EA + ++ G + H V+ + + +++D+AK + L
Sbjct: 474 TVTHPD--IIRYFML---IPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLM 528
Query: 270 SM 271
M
Sbjct: 529 GM 530
>TIGR_CMR|VC_0260 [details] [associations]
symbol:VC_0260 "mannosyl-transferase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000030 "mannosyltransferase
activity" evidence=ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GenomeReviews:AE003852_GR GO:GO:0000030 GO:GO:0009243 EMBL:Y07788
PIR:B82345 ProteinModelPortal:O05349 DNASU:2614878 PATRIC:20079562
ProtClustDB:CLSK793548 Uniprot:O05349
Length = 621
Score = 139 (54.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL------IPSKASSN 58
T K++++TGA G I S +C +++ P+ +V+ + +Y NL + I N
Sbjct: 280 TEKSVMVTGAGGSIGSELCRQILAQKPK-TLVLFELNEY--NLYTIDQELQAIKQNLKLN 336
Query: 59 FKFVK--GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 116
K V G + + V L+ ++T+ H AA HV N E +NN++GT
Sbjct: 337 TKIVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAN 396
Query: 117 ACKVTGQIRRFIHVSTDEVYGETD 140
A G ++ F +STD+ T+
Sbjct: 397 AAIEAG-VKNFTLISTDKAVRPTN 419
Score = 77 (32.2 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 155 PTNPYSATKAGAEMLVMAYGRSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMRGLPL 213
PTN A+K AE+++ A + T R NV G + ++P F G P+
Sbjct: 417 PTNIMGASKRMAELVLQALADKNSTTIFTMVRFGNVLGSSG---SVVPLFKKQIRAGGPV 473
Query: 214 PI-HGDGSNVRSYLYCEDVAEAFECILHKGEVGH---VYNVGTKKERRVIDVAKDICKLF 269
+ H D +R ++ + EA + ++ G + H V+ + + +++D+AK + L
Sbjct: 474 TVTHPD--IIRYFML---IPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLM 528
Query: 270 SM 271
M
Sbjct: 529 GM 530
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/133 (30%), Positives = 62/133 (46%)
Query: 99 NSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH--EASQLLPT 156
N + K N GT +L K G R + ST EVYG+ + ++ + + P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 60
Query: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLP 214
Y K AE + AY + G+ V R N +GP +++ FIL A++G PL
Sbjct: 61 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 120
Query: 215 IHGDGSNVRSYLY 227
++G GS R++ Y
Sbjct: 121 VYGSGSQTRAFQY 133
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 65/273 (23%), Positives = 123/273 (45%)
Query: 65 DIASADLVNFLLITESIDTIMHFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
D+ S V TE ++ AA+ H +N++ F I T+V+ A T
Sbjct: 56 DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSA--YT 112
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEAS-QLLPTNP-YSATKAGAEMLVMAYGRSYGL 179
+++ + + + +Y + + + + L PTN Y+ K + AY +
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQW 172
Query: 180 PVITTRGNNVYGPNQ-F-PEK--LIPKFI-----LLAMRGLPLPIHGDGSNVRSYLYCED 230
I+ N+YG N F PE ++P + A + + G GS +R +L+ +D
Sbjct: 173 DAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDD 232
Query: 231 VAEAFECILHK-GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
+A+A ++ + HV NVG+ E + ++A+ + ++ + + + +P R
Sbjct: 233 LADACVFLMDQYSGFEHV-NVGSGVEVTIKELAELVKEVVGF--KGKLVWDTTKPDGTPR 289
Query: 290 YFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQN 322
+D KL SLGW+ + ++GL +T EWY +N
Sbjct: 290 KLMDSSKLASLGWTPKISLKDGLSQTYEWYLEN 322
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 140 (54.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/169 (28%), Positives = 76/169 (44%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 89 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAY 173
+ ST EVYG+ + ++ + + P Y K AE + AY
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG G S++ L+ + Y + I L + +L P + NFK
Sbjct: 4 KVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHY 63
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTG 122
GD+ + + +L D + + AQ+HV SF S E+T + + GT LLEA + G
Sbjct: 64 GDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFLG 122
Query: 123 QIRR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
++ F ST E+YG E + E + P +PY+ K A + + Y SYG+
Sbjct: 123 LTKKTKFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG G S++ L+ + Y + I L + +L P + NFK
Sbjct: 4 KVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHY 63
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTG 122
GD+ + + +L D + + AQ+HV SF S E+T + + GT LLEA + G
Sbjct: 64 GDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFLG 122
Query: 123 QIRR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
++ F ST E+YG E + E + P +PY+ K A + + Y SYG+
Sbjct: 123 LTKKTKFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>DICTYBASE|DDB_G0276473 [details] [associations]
symbol:DDB_G0276473 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 dictyBase:DDB_G0276473
GO:GO:0045335 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AAFI02000015 eggNOG:COG1088
OMA:ETMKLLW RefSeq:XP_643167.1 ProteinModelPortal:Q86HU8
PRIDE:Q86HU8 EnsemblProtists:DDB0234265 GeneID:8620575
KEGG:ddi:DDB_G0276473 InParanoid:Q86HU8 ProtClustDB:CLSZ2430901
Uniprot:Q86HU8
Length = 363
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 72/275 (26%), Positives = 126/275 (45%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDK-LDYCSNL--KNLIPSKASSNFKFVKG 64
N+LI G GFI ++ L+ KI V DK L + L K+L + A + ++++G
Sbjct: 5 NVLILGGVGFIGRNLVQYLVEQKCCNKIRVADKVLPATAFLGAKHL-EAFADPSVEYMQG 63
Query: 65 DIASADLVN--FLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV--LLEACKV 120
++ASA + F L + + + A +T +G + +Y V EA KV
Sbjct: 64 NLASAASITKCFTLEGGKFNIVFNLAGET----KYGQTDAVYNEKVYDVSVKCATEAAKV 119
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNH-EASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
G + +FI VST ++Y + + G+ + L+ ++ A KA E+ GL
Sbjct: 120 -G-VDKFIEVSTAQIYSSNKKPSKEGDKTDPWTLIASHKLKAEKALKEI--------NGL 169
Query: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAM---RGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
+I R + VYGP + P+ I A+ + DG + ++ DV +A
Sbjct: 170 NLIIVRPSVVYGPGDILG-ISPRIITGAVYKHTNEKMKFLWDGDLKYNTVHVNDVCKALW 228
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM 271
+ G+VG VYN+ K + ++K + K+F++
Sbjct: 229 FLSQNGKVGDVYNLSDKGDTDAQTISKILEKIFAI 263
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 157 (60.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 67/245 (27%), Positives = 104/245 (42%)
Query: 7 KNILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK-FVK- 63
K ITG G S++ L+R +Y + ++ L ++ K N + F+
Sbjct: 3 KKAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHY 62
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLEACKVTG 122
GDI ++N L+ + + AAQ+HV SF +T I GT +LEA K
Sbjct: 63 GDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPV-YTMETIGLGTLNILEAIKNAD 121
Query: 123 QIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+ RF S+ E+YG+ V E++ P +PY+ K A + Y SYGL
Sbjct: 122 NAKEIRFYQASSSEMYGDVKS---VPQTESTPFNPRSPYACAKVFAHYQTINYRESYGLH 178
Query: 181 VITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAFE 236
T N P + F + I I + GL I+ G+ R + Y +D EA
Sbjct: 179 ASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEAMW 238
Query: 237 CILHK 241
+L +
Sbjct: 239 LMLQQ 243
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 157 (60.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 69/260 (26%), Positives = 104/260 (40%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ IL+TG AG+I SH +L Y+ VV+D L + +P A +
Sbjct: 7 ERILVTGGAGYIGSHCVLQLAE--AGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPI 64
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
F + DI + L T +MHFA V S E+ N+ GT LLEA +
Sbjct: 65 AFQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAME 124
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-G 178
+R + S+ VYG+ + H TNPY +K E ++ ++ G
Sbjct: 125 AYS-VRNIVFSSSATVYGDPQYLPLDEKHPVGGC--TNPYGKSKYFIEEMIQDLCKAEKG 181
Query: 179 LPVITTRGNNVYG----------PNQFPEKLIPKFILLAM-RGLPLPIHG------DGSN 221
I R N G P P L+P +A+ R L + G DG+
Sbjct: 182 WNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTG 241
Query: 222 VRSYLYCEDVAEAFECILHK 241
+R Y++ D+A+ L K
Sbjct: 242 IRDYIHVVDLAKGHIAALKK 261
>UNIPROTKB|Q5HTB4 [details] [associations]
symbol:flmA "Polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 141 (54.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+ KNILITG G L+ NY KI++ + D + AS F+
Sbjct: 2 FNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASCMRYFI- 59
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GD+ + ++ + +D ++H AA HV + N E K NI+G +++AC G
Sbjct: 60 GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG- 116
Query: 124 IRRFIHVSTDE 134
+++ I +STD+
Sbjct: 117 VKKCIALSTDK 127
Score = 59 (25.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 31/98 (31%), Positives = 40/98 (40%)
Query: 155 PTNPYSATKAGAEMLVMAYGRSYGLPVI---TTRGNNVYGPNQFPEKLIPKFILLAMRGL 211
P N Y ATK ++ L +A G TR NV G ++P F L G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 212 P-LPIHGDGSNVRSYLYCED----VAEAFECILHKGEV 244
LPI D R ++ ED V FE +H GE+
Sbjct: 188 KELPIT-DTRMTRFWISLEDGVKFVLSNFER-MHGGEI 223
>TIGR_CMR|CJE_1485 [details] [associations]
symbol:CJE_1485 "polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 141 (54.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+ KNILITG G L+ NY KI++ + D + AS F+
Sbjct: 2 FNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASCMRYFI- 59
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GD+ + ++ + +D ++H AA HV + N E K NI+G +++AC G
Sbjct: 60 GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG- 116
Query: 124 IRRFIHVSTDE 134
+++ I +STD+
Sbjct: 117 VKKCIALSTDK 127
Score = 59 (25.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 31/98 (31%), Positives = 40/98 (40%)
Query: 155 PTNPYSATKAGAEMLVMAYGRSYGLPVI---TTRGNNVYGPNQFPEKLIPKFILLAMRGL 211
P N Y ATK ++ L +A G TR NV G ++P F L G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 212 P-LPIHGDGSNVRSYLYCED----VAEAFECILHKGEV 244
LPI D R ++ ED V FE +H GE+
Sbjct: 188 KELPIT-DTRMTRFWISLEDGVKFVLSNFER-MHGGEI 223
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 67/246 (27%), Positives = 107/246 (43%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL--IPSKASSNFKFVKGDI 66
I++TG AG+I SH LI Y V++D L S+L+ + + S +F DI
Sbjct: 8 IMVTGGAGYIGSHTVIELIE--AGYTPVIVDNLSN-SSLEAIKRVESITGKEIEFHHVDI 64
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ ++ + T +I +++HFA V S ++ NNI GT LL ++++
Sbjct: 65 MNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMD-KHRVKK 123
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---------- 176
+ S+ VYG+ + E L TNPY TK E ++ S
Sbjct: 124 LVFSSSATVYGDPHTVPIT---EDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLR 180
Query: 177 YGLPVITTRGNNVYG--PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVRSYLY 227
Y PV + + G P P L+P A+ P L I G DG+ VR +++
Sbjct: 181 YFNPV-GAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIH 239
Query: 228 CEDVAE 233
D+A+
Sbjct: 240 VVDLAK 245
>TAIR|locus:2051018 [details] [associations]
symbol:CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like
2" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009809 "lignin biosynthetic process"
evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase activity"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
HOGENOM:HOG000167998 EMBL:AC002332 ProtClustDB:CLSN2683499
EMBL:AY093143 EMBL:BT008718 IPI:IPI00521551 PIR:E84747
RefSeq:NP_180918.1 UniGene:At.42953 ProteinModelPortal:O22810
SMR:O22810 PaxDb:O22810 PRIDE:O22810 EnsemblPlants:AT2G33600.1
GeneID:817926 KEGG:ath:AT2G33600 TAIR:At2g33600 InParanoid:O22810
OMA:EIDIGEH PhylomeDB:O22810 ArrayExpress:O22810
Genevestigator:O22810 Uniprot:O22810
Length = 321
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 78/332 (23%), Positives = 143/332 (43%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF 59
MA + +TGA GF+ S V N L+ R+Y + V + ++LK L KA
Sbjct: 1 MAVVQKGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVRDPGNEKYAHLKKL--DKAGDKL 58
Query: 60 KFVKGDIASADLVNFLLITESI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 116
K K ADL+N+ + +I + H A + + + GT +L+
Sbjct: 59 KLFK-----ADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLK 113
Query: 117 ACKVTGQIRRFIHVST------DEVYGETDE-DAVVGNHEASQLLPTNPYSATKAGAEML 169
AC V +++R ++VS+ + ++ ++ D + + N YS +K AE
Sbjct: 114 AC-VEAKVKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESE 172
Query: 170 VMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229
+ + GL +++ V GP + + L+ ++ L + R +
Sbjct: 173 AFEFAKRTGLDLVSVCPTLVLGP-VLQQHTVNASSLVLLKLLKEGYESRNNQERHLVDVR 231
Query: 230 DVAEAFECILHKGEV-GHVYNVG-TKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
DVA+A + K E G +G T +E+ V + K + ++ P+ +++E D
Sbjct: 232 DVAQALLLVYEKAEAEGRYICIGHTVREQEVAEKLKSLYLNYNY-PK---RYIEA----D 283
Query: 288 QRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ + +KL LGW+ R + EE L ++E Y
Sbjct: 284 GKVKVSSEKLQKLGWTYRPL-EETLVDSVESY 314
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 60/270 (22%), Positives = 116/270 (42%)
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI + ++ + D ++H AAQ V S+ E N+ GT +LEA ++
Sbjct: 67 GDIRDLQAITHSMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVMGTLHVLEAARLCPN 126
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLP-- 180
+R ++V+TD+ Y + + G E + +PYS +K E++ +Y S+ P
Sbjct: 127 LRAIVNVTTDKCYENREWEW--GYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTPQA 184
Query: 181 --VITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
+ + R NV G + E +LIP + +G P+ + + R + + + +
Sbjct: 185 AALASARAGNVIGGGDWAEDRLIPDILRAFEKGQPVTVRNPQAT-RPWQHVLEPLSGYLV 243
Query: 238 IL-HKGEVGHVY----NVGTKKE-RRVID-VAKDICKLFSMDPETSIKFVENRPFNDQRY 290
+ H + GH + N G K E R ++ + + + + ++ P
Sbjct: 244 LAEHLWKNGHQFAQGWNFGPKDEDARPVEWILNYMVDSWGDGAHWQLDR-DSHPHEANYL 302
Query: 291 FLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
LD K + L W+ E+ L + ++W+
Sbjct: 303 KLDISKARARLNWAPTWNLEKTLSRIVQWH 332
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 134 (52.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 126 RFIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
R + ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 158
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 153 (58.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 51/177 (28%), Positives = 79/177 (44%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG +G S++ L+ + Y + ++ + +L P +
Sbjct: 2 KRALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHY 61
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTG 122
GD+ A +N +L D I + AQ+HV SF E+T + GT LLE + TG
Sbjct: 62 GDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVP-EYTGEIDALGTVRLLEGIRETG 120
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
RF S+ E+YG+ E E + P +PY+ KA A + + Y SYG+
Sbjct: 121 LNTRFYQASSSELYGKVVETP---QKETTPFYPRSPYACAKAYAYYITVNYRESYGM 174
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEK--LIP----KFILLAMR 209
PY+ K L +Y R YG + N+YGP N P +IP +F +
Sbjct: 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQ 194
Query: 210 GLP-LPIHGDGSNVRSYLYCEDVAEA--------FECILHKGE--VGHVYNVGTKKERRV 258
P + + G G+ +R +L+ +D+A A E L + + H+ NVGT + +
Sbjct: 195 NAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHI-NVGTGVDCTI 253
Query: 259 IDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEW 318
++A+ I K+ + + F ++P R LD +L LGW E GL T +W
Sbjct: 254 RELAQTIAKVVGY--KGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQW 311
Query: 319 YTQNPD 324
+ +N D
Sbjct: 312 FLENQD 317
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 1 MATYTPKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNL----IPSK 54
+A + + + LITG +G S++ L+ + Y + I+ + +++L I
Sbjct: 44 LAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHH 103
Query: 55 ASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 113
S+F GD+ + + L+ T + H AAQ+HV SF E+T + GT
Sbjct: 104 GDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLR 162
Query: 114 LLEA---CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
LL+A C++T ++R F ST E+YG+ E + E + P +PY+ K +V
Sbjct: 163 LLDAIHACRLTEKVR-FYQASTSELYGKVQE---IPQSEKTPFYPRSPYAVAKMYGYWIV 218
Query: 171 MAYGRSYGL 179
+ Y +Y +
Sbjct: 219 VNYREAYNM 227
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 1 MATYTPKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNL----IPSK 54
+A + + + LITG +G S++ L+ + Y + I+ + +++L I
Sbjct: 44 LAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHH 103
Query: 55 ASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 113
S+F GD+ + + L+ T + H AAQ+HV SF E+T + GT
Sbjct: 104 GDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLR 162
Query: 114 LLEA---CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
LL+A C++T ++R F ST E+YG+ E + E + P +PY+ K +V
Sbjct: 163 LLDAIHACRLTEKVR-FYQASTSELYGKVQE---IPQSEKTPFYPRSPYAVAKMYGYWIV 218
Query: 171 MAYGRSYGL 179
+ Y +Y +
Sbjct: 219 VNYREAYNM 227
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 60/232 (25%), Positives = 99/232 (42%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+++LI G +GF+ H+ + R+ P I V D L S +F KGD+
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSK-IQFFKGDL 64
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKVTGQIR 125
S V+ + D I+H A+ H G E + K N+ GT LL + ++
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL-HVK 118
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGLPVI 182
++ S+ V +D + N + + P + Y+ TKA AE VM + L +
Sbjct: 119 ALVYTSSAGVIFN-GQDVI--NADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQLRTV 175
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R ++GP +L+P A G GD +N+ + Y +VA+A
Sbjct: 176 CLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
LG+ E G+ T++W ++
Sbjct: 327 LGYKPEVDLETGINYTLDWMNED 349
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 60/232 (25%), Positives = 99/232 (42%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+++LI G +GF+ H+ + R+ P I V D L S +F KGD+
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSK-IQFFKGDL 64
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKVTGQIR 125
S V+ + D I+H A+ H G E + K N+ GT LL + ++
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL-HVK 118
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGLPVI 182
++ S+ V +D + N + + P + Y+ TKA AE VM + L +
Sbjct: 119 ALVYTSSAGVIFN-GQDVI--NADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQLRTV 175
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R ++GP +L+P A G GD +N+ + Y +VA+A
Sbjct: 176 CLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
LG+ E G+ T++W ++
Sbjct: 327 LGYKPEVDLETGINYTLDWMNED 349
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 76/281 (27%), Positives = 122/281 (43%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFK 60
P+N+ LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 61 FVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA 117
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 82 LHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 118 CKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
K G I +F ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 176 SYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDV 231
+Y L + N P + F + I + + G L G+ R + + +D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 232 AEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
EA +L E G V++V E+ + + K I
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 296
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 76/281 (27%), Positives = 122/281 (43%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFK 60
P+N+ LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 61 FVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA 117
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 82 LHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 118 CKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
K G I +F ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 176 SYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDV 231
+Y L + N P + F + I + + G L G+ R + + +D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 232 AEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
EA +L E G V++V E+ + + K I
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 296
>UNIPROTKB|Q4K8N4 [details] [associations]
symbol:wbpV "Putative UDP-glucose 4-epimerase WbpV"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_261399.1 ProteinModelPortal:Q4K8N4
STRING:Q4K8N4 GeneID:3481462 KEGG:pfl:PFL_4307 PATRIC:19878034
OMA:RRFVFIS BioCyc:PFLU220664:GIX8-4342-MONOMER Uniprot:Q4K8N4
Length = 320
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 66/258 (25%), Positives = 113/258 (43%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TGA+GF+ V L ++ P +K+ V+ ++ IP+ A++ I
Sbjct: 4 ILLTGASGFVGGAVHECLSKHSP-HKLTVV--------VRKPIPALAATTSVTQVEQIDG 54
Query: 69 ADLVNFLLITESIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
L ++ I + ++H AA+ HV ++S F K N+ GT L G + R
Sbjct: 55 --LTDWSSILLDCNVVVHAAARVHVMHESSLDPLEAFRKVNVEGTLNLARQAAQRG-VGR 111
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F+ +S+ +V GE V + + PT+PY +K AE + G+ V+ R
Sbjct: 112 FVFISSIKVNGEGTPLNVPYTAD-DEPAPTDPYGISKMEAEKGLTLIASQTGMEVVIIRP 170
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHKGEVG 245
VYGP + +G+PLP G N RS + +++ + CI H
Sbjct: 171 VLVYGPGVKANFF--NMMRWLYKGIPLPF-GAIDNRRSLVALDNLVDLIVTCIDHPLAAN 227
Query: 246 HVYNVGTKKERRVIDVAK 263
V+ V ++ ++ K
Sbjct: 228 QVFLVSDGEDLSTTELLK 245
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 76/281 (27%), Positives = 122/281 (43%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFK 60
P+N+ LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 61 FVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA 117
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 82 LHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 118 CKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
K G I +F ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 176 SYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDV 231
+Y L + N P + F + I + + G L G+ R + + +D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 232 AEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
EA +L E G V++V E+ + + K I
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTI 296
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/180 (28%), Positives = 85/180 (47%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNL----IPSKASSNFKF 61
K LITG G S++ L+ + Y + I+ + +++L + S++F
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSL 93
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA--- 117
GD+ + + L+ T I H AAQ+HV SF E+T + GT LL+A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
C++T ++R F ST E+YG+ E + E + P +PY+ K +V+ Y +Y
Sbjct: 153 CRLTEKVR-FYQASTSELYGKVQE---IPQSELTPFYPRSPYAVAKMYGYWIVVNYREAY 208
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/180 (28%), Positives = 85/180 (47%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNL----IPSKASSNFKF 61
K LITG G S++ L+ + Y + I+ + +++L + S++F
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSL 93
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA--- 117
GD+ + + L+ T I H AAQ+HV SF E+T + GT LL+A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
C++T ++R F ST E+YG+ E + E + P +PY+ K +V+ Y +Y
Sbjct: 153 CRLTEKVR-FYQASTSELYGKVQE---IPQSELTPFYPRSPYAVAKMYGYWIVVNYREAY 208
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 77/324 (23%), Positives = 139/324 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKN--LIPSKASSNFKFVKGDI 66
+ ITG AGFI S + L +++I+++DK+ + +N L N G++
Sbjct: 3 VAITGGAGFIGSQLALNL---QEKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 67 ASADLVNFLLITESID----TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ D+ + ++ + D I H AA + D + + + + N+ + + +++
Sbjct: 60 FAGDINDEKVLKKIEDFKPEIIFHQAAIS--DTTVFDQTKVLQTNL---NTFKDFIELSI 114
Query: 123 QIR-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
+ + I+ S+ VYG+ VG E P NPY+ +K + L Y L
Sbjct: 115 DLNAKLIYASSASVYGDAKSPQTVGKDEE----PKNPYAFSKLMMDKLAKKYYDKAHL-- 168
Query: 182 ITTRGNNVYGPNQFPEKLIPKFIL------LAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
+ R NVYG +F + +L LA + P G R + Y +DV A
Sbjct: 169 VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKN-PRLFEGSDQIYRDFTYIKDVINA- 226
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQ 295
I + G VYNVG+ K R D+ DI + + + +++ N P+ F +
Sbjct: 227 NLIALDSKCG-VYNVGSGKARTFQDIV-DILQK-ELKTDLPCEYIPN-PYVKSYQFHTEA 282
Query: 296 KLTSLGWSERTIW--EEGLRKTIE 317
KL W + + EEG++ ++
Sbjct: 283 KLDQT-WDYQPKFSLEEGIKDYLD 305
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 130 (50.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 138
+ I T+ H A+ TH G ++ N + GT L+EAC G +++ ++ S+ V
Sbjct: 62 KGITTVFHTASPTH---GMGYDIYYSVN-VIGTERLIEACIKCG-VKQLVYTSSSSVVFN 116
Query: 139 TDEDAVVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE 197
+D V G+ + +PY+ TK E V+ + L V R ++GP +
Sbjct: 117 -GKDIVNGDETLPYVDKHIDPYNKTKELGERAVLK-AKGSNLLVCALRPAGIFGPREVQG 174
Query: 198 KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
P+F+ A G + GDG+N+ + Y ++V A
Sbjct: 175 W--PQFLKAAKEGKNKFMFGDGNNLCDWTYIDNVVHA 209
Score = 57 (25.1 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 286 NDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQ-NPDW 325
N RYF ++ L + +G+ KT EW+ Q NP +
Sbjct: 296 NSTRYFNIEKAKKELKYKPIVSLRDGMEKTKEWFLQQNPSF 336
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 20/86 (23%), Positives = 33/86 (38%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K+ L+ G GF+ ++ L+ E + V D + S F GDI
Sbjct: 3 KSYLVVGGCGFLGRYIVESLLAR-GEKNVHVFD----------IRKSFEDDRVTFHIGDI 51
Query: 67 ASADLVNFLLITESIDTIMHFAAQTH 92
+ + + I T+ H A+ TH
Sbjct: 52 RKTE--DLESACKGITTVFHTASPTH 75
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 134 (52.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 126 RFIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
R + ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 158
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/181 (28%), Positives = 81/181 (44%)
Query: 5 TPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
T K LITG G S++ L+ + Y + I + ++ N KF
Sbjct: 3 TKKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFL 62
Query: 64 --GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKV 120
GD+ + + +L D + + AQ+HV SF E+T + + GT LLEA +
Sbjct: 63 HYGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSF-ECPEYTADVDAIGTLRLLEAIRF 121
Query: 121 TGQIRR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
G ++ F ST E+YGE E + E + P +PY+ K A +V+ Y SYG
Sbjct: 122 LGLEKKTKFYQASTSELYGEVQE---IPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYG 178
Query: 179 L 179
+
Sbjct: 179 M 179
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 149 (57.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 56/193 (29%), Positives = 91/193 (47%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS-NFKFVKGDIAS 68
L+TG GF+ H+ L+ P + + + L S L+ L KA ++GD+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEEL---KAGPVQVTAIQGDVTQ 69
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKVTGQIRR 126
A V + + ++H A V FG + T K N+ GT +++AC TG +
Sbjct: 70 AHEVAAAMSGSHV--VIHTAGLVDV---FGKASPKTIHKVNVQGTQNVIDACVQTGT-QY 123
Query: 127 FIHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY--GLP 180
++ S+ EV G + GN + + + ++PY +KA AE LV+ A GR GLP
Sbjct: 124 LVYTSSMEVVGPNIKGHPFYRGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRKVNGGLP 183
Query: 181 VITT--RGNNVYG 191
++T R +YG
Sbjct: 184 LVTCALRPTGIYG 196
Score = 43 (20.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 301 GWSERTIWEEGLRKTIEW 318
G+ WEE +TI+W
Sbjct: 343 GYKPLFSWEESRTRTIQW 360
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 141 (54.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 63/221 (28%), Positives = 100/221 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
L+TG GF+ HV L++ P ++ V D L L+ L ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFD-LHLGPWLEEL--ETGPVQVTAIQGDVTQ 69
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKVTGQIRR 126
A V + + ++H A V FG + T + N+ GT ++EAC G R
Sbjct: 70 AHEVAAAVAGAHV--VIHTAGLVDV---FGRASPETIHEVNVQGTQNVIEACVQNGT-RF 123
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSY--GLPVIT 183
++ S+ EV G T +EA+ +PY +KA AE LV+ A GR GLP++T
Sbjct: 124 LVYTSSMEVVGPTTRGNENTPYEAAH---RHPYPRSKALAERLVLEANGRKVRGGLPLVT 180
Query: 184 T--RGNNVYGP-NQFPEKLIPKFILLA---MRGLPLPI-HG 217
R +YG +Q + + + L +R +P + HG
Sbjct: 181 CALRPTGIYGEGHQIMKDFYHQGLRLGGRLLRAIPASVEHG 221
Score = 51 (23.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 294 DQKLTSLGWSERTIWEEGLRKTIEWYTQNPD 324
D+ L G+ WEE +TI W D
Sbjct: 330 DKALRHFGYEPLFSWEESRARTIRWVQAGED 360
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 148 (57.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 67/238 (28%), Positives = 109/238 (45%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIPSKASSNFKFVKGDIA 67
+ ITGA GF+ S V RLI+ + + + V + Y CS+ + + S S + D
Sbjct: 8 VAITGATGFVGSAVVRRLIK-HTGHSVRVAVRGAYSCSSERINVVSAES-----LAPDNQ 61
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNS--FEFTKNNIYGTHVLLEACKVTGQIR 125
+DLV ++H AA+ HV N + E+ + N+ T L E G +R
Sbjct: 62 WSDLVT------GAHVVIHCAARVHVLNETADEPDQEYFRANVTATLNLAEQAAAAG-VR 114
Query: 126 RFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
RFI +S+ + GE T A + P + Y +K AE + G+ V+
Sbjct: 115 RFIFLSSIKANGEFTHPGAPFRADDPCN--PLDAYGVSKQKAEEGLRELSARSGMQVVII 172
Query: 185 RGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE-AFECILH 240
R VYGP K + +++ +GLPLP+ G +N RS + +++A+ C+ H
Sbjct: 173 RPVLVYGPGVKANFKSMMRWL---DKGLPLPL-GSINNRRSLVAVDNLADLVMVCVDH 226
Score = 41 (19.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 562 VNIPNSMTVLDELLPISIEMAKRN 585
V+I + T+LD P+SIE A ++
Sbjct: 291 VDISKTCTMLDWHPPVSIEHAMQD 314
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 142 (55.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 48/173 (27%), Positives = 82/173 (47%)
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F +GD+ D + ++ + + + H A+ + G F+ + NI GT +++AC
Sbjct: 52 FYQGDLC--DKLALVMALKEVSIVFHCASPAPGSDD-GALFQ--RVNIDGTRTVIQACHE 106
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSATKAGAEMLVM-AYGRSYG 178
G +++ I S+ V E D G + P + Y+ TK E LV+ A + G
Sbjct: 107 AG-VQKLILTSSASVVFE-GTDIKNGKEDLPYAKKPIDYYTETKIKQEKLVLEACSKEKG 164
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
+ R + ++GP P+ L+P + A RG I GDGSN+ + Y E+V
Sbjct: 165 FLTVAIRPHGIFGPRD-PQ-LVPILVDTARRGKMKFIIGDGSNLVDFTYVENV 215
Score = 48 (22.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNY 30
K + G +GF+ H+ RL+ R Y
Sbjct: 10 KRCTVIGGSGFLGRHLVERLVDRGY 34
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 70/306 (22%), Positives = 121/306 (39%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG G S++ L+ + Y + ++ S + +L P + +
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GD+ + LL T D + + AAQ+HV SF G+ LLEA +++
Sbjct: 62 GDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
RF S+ E++G + +E + P +PY A K + Y +YGL +
Sbjct: 122 HCRFYQASSSEMFGASPPP----QNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVN 177
Query: 184 TRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAFECIL 239
N P + F + I + + G+ ++ G+ VR + Y + E +L
Sbjct: 178 GILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWRML 237
Query: 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN--RPFNDQRYFLDDQKL 297
E + + T + V + A+ + +D + +KF + RP D K
Sbjct: 238 QTDEPDD-FVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRPTEVDSLIGDATKA 296
Query: 298 TSL-GW 302
L GW
Sbjct: 297 AELLGW 302
>UNIPROTKB|I3L900 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:FYNFQPF Ensembl:ENSSSCT00000025649
Uniprot:I3L900
Length = 390
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 61/253 (24%), Positives = 113/253 (44%)
Query: 5 TPKN-ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+PK +LITG G+ + L N ++++ D S+ + IP KF++
Sbjct: 6 SPKETVLITGGGGYFGFRLGCAL--NQKGLRVILFD----VSSPAHTIPE----GVKFIR 55
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI V + + H A+ N N+ GT +L+AC+ G
Sbjct: 56 GDIRLLADVERAFEDADVTCVFHIASYGMSGREQLNRSRIEDVNVGGTDNVLQACRSRG- 114
Query: 124 IRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRSY 177
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G++
Sbjct: 115 VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSVAEKKVLEANGKAL 171
Query: 178 G-LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
L R +YGP + ++ +P+ + +GL ++GD ++ +++ +++ +A
Sbjct: 172 AXLRTCALRPAGIYGPGE--QRHLPRIVSYLEKGLFRFVYGDPKSLVEFVHVDNLVQAHI 229
Query: 237 CILH--KGEVGHV 247
K + GHV
Sbjct: 230 LASEALKADKGHV 242
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 140 (54.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 62/234 (26%), Positives = 97/234 (41%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + + L +I LDK L+ ++ + V+GDI
Sbjct: 7 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTGQIRRFI 128
+ + ++H A+ V N E N N+ GT +LLEAC + FI
Sbjct: 67 QCLK--RACQGTSVVIHTASVIDVMNVIHR--ETIMNVNLKGTQLLLEAC-AQASVPIFI 121
Query: 129 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYG----RSYG-LP 180
+ ST EV G ++ N HE L T PY +K AE V+A ++ G L
Sbjct: 122 YTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLH 181
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R +YG + +I A+R + H ++ + +Y +VA A
Sbjct: 182 TCALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 232
Score = 50 (22.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYKPLFSWEEAKQKTTEW 356
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 140 (54.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 62/234 (26%), Positives = 97/234 (41%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + + L +I LDK L+ ++ + V+GDI
Sbjct: 11 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 70
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTGQIRRFI 128
+ + ++H A+ V N E N N+ GT +LLEAC + FI
Sbjct: 71 QCLK--RACQGTSVVIHTASVIDVMNVIHR--ETIMNVNLKGTQLLLEAC-AQASVPIFI 125
Query: 129 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYG----RSYG-LP 180
+ ST EV G ++ N HE L T PY +K AE V+A ++ G L
Sbjct: 126 YTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLH 185
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R +YG + +I A+R + H ++ + +Y +VA A
Sbjct: 186 TCALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 236
Score = 50 (22.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 342 LGYKPLFSWEEAKQKTTEW 360
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 145 (56.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 59/195 (30%), Positives = 91/195 (46%)
Query: 10 LITGAAGFIASHVCNRLIRNYP---EYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
L+TG GF+ HV L++ P E +I L + LK P + ++ ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKTG-PVQVTA----IQGDV 67
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKVTGQI 124
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGKTSPETIHEVNVQGTQNVIEACVQTGT- 121
Query: 125 RRFIHVSTDEVYGET--DEDAVVGNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY--G 178
R I+ S+ EV G + GN + + +PY +KA AE LV+ A GR G
Sbjct: 122 RFLIYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLEANGREVLGG 181
Query: 179 LPVITT--RGNNVYG 191
LP++T R +YG
Sbjct: 182 LPLVTCALRPTGIYG 196
Score = 43 (20.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 294 DQKLTSLGWSERTIWEEGLRKTIEW 318
D+ G+ WEE +TI W
Sbjct: 336 DKARRHFGYEPLFSWEESRTRTIRW 360
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 75/281 (26%), Positives = 121/281 (43%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFK 60
P+ + LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 22 PRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 61 FVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA 117
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 82 LHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 118 CKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
K G I +F ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 176 SYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDV 231
+Y L + N P + F + I + + G L G+ R + + +D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 232 AEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
EA +L E G V++V E+ + + K I
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTI 296
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 148 (57.2 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 59/237 (24%), Positives = 102/237 (43%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK-----LDYCSNLKNLIPSKASSNFKF 61
K ++ G GFI + +RL+R + + V D LD +L S +++
Sbjct: 13 KTCVVLGGRGFIGRSLVSRLLR-LGNWTVRVADSGHTLHLDESDSLLEDALSSGRASYHC 71
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
V D+ D + +TE + + A D + F+ K + GT ++ AC+ +
Sbjct: 72 V--DVR--DKPQIVKVTEGSYVVFYMGA---TDLRSHDYFDCYKVIVQGTRNVISACRES 124
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATKAGAEMLVMAYGRSYGLP 180
G +R+ I+ ST +V + + G+ + L + + KA AE L+ GL
Sbjct: 125 G-VRKLIYNSTADVVFDGSQPIRDGDESLRRPLKFQSMLTDFKAQAEALIKLANNRDGLL 183
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
R + V+GP + +P + LA G I G G N+ + Y E+V+ A C
Sbjct: 184 TCALRSSIVFGPGD--TEFVPFLVNLAKSGYAKFILGSGENISDFTYSENVSHAHIC 238
Score = 46 (21.3 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
LG++ E+G+ T++W++++
Sbjct: 335 LGYTPVVTLEDGIASTLQWFSRD 357
Score = 40 (19.1 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 368 RMVVPVSKCSSPRKP 382
RMV+PVS SS KP
Sbjct: 546 RMVIPVSDASS--KP 558
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 77/329 (23%), Positives = 130/329 (39%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
T + ILITGA GF+ ++ L+ ++ S L L S A + + +
Sbjct: 2 TGRRILITGANGFVGGYMIRELVAAGYQH-----------SELHTLTVSGAEQSLRIGQA 50
Query: 65 ---DIASADLVNFLLITESIDTIMHFAA-----QTHVDNSFGNSFEFTKNNIYGTHVLLE 116
D+ + ++ LL I+H AA Q D S + F G VL
Sbjct: 51 HRCDLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVL-- 108
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
AC + + + E YG + +E + L P PY+ATKA A++ + R+
Sbjct: 109 ACSPHAVL---VFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAADV-ALGQMRN 164
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKF---ILLAMRGLPLPIH--GDGSNVRSYLYCEDV 231
GL + R N GP Q P+ ++ F I + G P+ G+ +R ++ DV
Sbjct: 165 DGLNAVRFRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDV 224
Query: 232 AEAFECILHK--GEVGH-VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
+ L V V+N+ + R + + + + +D + R +
Sbjct: 225 VRGYRLALETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKNDVP 284
Query: 289 RYFLDDQKL-TSLGWSERTIWEEGLRKTI 316
R + D + T LGW +E+ L T+
Sbjct: 285 RTWGDANRARTELGWVPYLAFEQTLVDTL 313
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 148 (57.2 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 52/232 (22%), Positives = 99/232 (42%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIPSKASSNFKFVKGDI 66
++L+ G GF+ SH+ L+ +YK + +D C+ + ++ DI
Sbjct: 12 SVLVVGGCGFLGSHIVRMLL---DDYKCSAVSAVDLRCTRNRR-------EGVQYHDADI 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+A+ + + D ++H A+ NS + F K N+ GT ++EACK G ++
Sbjct: 62 TNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAG-VKA 120
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLL---PTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ S+ V + D + + + T YS TKA AE +V+ L
Sbjct: 121 LVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLTAA 180
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEA 234
R + ++G + ++ ++ R + GD +N+ + Y +VA A
Sbjct: 181 IRPSGIFGEG---DSMVTANLVKTYREGKWKVQVGDNNNLFDFTYAGNVAHA 229
Score = 39 (18.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 289 RYFLDDQKLTSLGWSERTIWEEGLRKTIEW 318
RY+ + LG++ EEG+R+ +++
Sbjct: 329 RYYNITKAKQRLGYAPIVSMEEGVRRGVQY 358
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 137 (53.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 62/234 (26%), Positives = 99/234 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ +I VLDK+ K + S ++GDI
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEEDLEEIRVLDKVFRPETRKEFFNLETSIKVTVLEGDILDT 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H AA V N+ GT LLEAC + + FI
Sbjct: 67 QYLR--RACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 130 VSTDEVYGETD-EDAVVGNHEAS--QLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 181
S+ +V G ++ V+ HE + ++PY +K AE V+A S G L
Sbjct: 123 SSSVDVAGPNSYKEIVLNGHEEECHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLQT 182
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS-NVRSYLYCEDVAEA 234
R +YG P LI I++A++ + + G N + +Y +VA A
Sbjct: 183 CALRPMCIYGERS-P--LISNIIIMALKHKGI-LRSFGKFNTANPVYVGNVAWA 232
Score = 51 (23.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 138 (53.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 54/170 (31%), Positives = 79/170 (46%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TGA GF+ + L++ +I VLDK + L+ SK + K ++GDI
Sbjct: 7 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKA-FGPELREEF-SKLQNKTKLTVLEGDIL 64
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKVTGQIR 125
+ + + I+H A V FG + E N N+ GT +LLEAC V +
Sbjct: 65 DEPFLK--RACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 118
Query: 126 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 119 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 168
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 308 WEEGLRKTIEW 318
WEE +KT+EW
Sbjct: 346 WEEAKQKTVEW 356
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 138 (53.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 54/170 (31%), Positives = 79/170 (46%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TGA GF+ + L++ +I VLDK + L+ SK + K ++GDI
Sbjct: 9 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKA-FGPELREEF-SKLQNKTKLTVLEGDIL 66
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKVTGQIR 125
+ + + I+H A V FG + E N N+ GT +LLEAC V +
Sbjct: 67 DEPFLK--RACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 120
Query: 126 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 121 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 170
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 308 WEEGLRKTIEW 318
WEE +KT+EW
Sbjct: 348 WEEAKQKTVEW 358
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 136 (52.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ VLDK+ + S ++GDI
Sbjct: 7 LVTGAGGFLGQRIVQLLVQEKDLKEVRVLDKVFRPETREEFFNLGTSIKVTVLEGDILDT 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTGQIRRFI 128
+ + I ++H AA +D + N + + N+ GT LLEAC V + FI
Sbjct: 67 QCLR--RACQGISVVIHTAAL--IDVTGVNPRQTILDVNLKGTQNLLEAC-VQASVPAFI 121
Query: 129 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
+ ST +V G ++ N HE T NPY +K AE V+A
Sbjct: 122 YCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEKAVLA 168
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYKPLVSWEEAKQKTSEW 356
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 75/279 (26%), Positives = 119/279 (42%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFKFV 62
K LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 63 KGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 119
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIK 140
Query: 120 VTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 178 GLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAE 233
L + N P + F + I + + G L G+ R + + +D E
Sbjct: 198 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 257
Query: 234 AFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
A +L E G V++V E+ + + K I
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTI 296
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 75/279 (26%), Positives = 119/279 (42%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFKFV 62
K LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 63 KGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 119
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIK 140
Query: 120 VTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 178 GLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAE 233
L + N P + F + I + + G L G+ R + + +D E
Sbjct: 198 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 257
Query: 234 AFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
A +L E G V++V E+ + + K I
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTI 296
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 75/279 (26%), Positives = 119/279 (42%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--P-SKASSNFKFV 62
K LITG G S++ L+ + Y + IV +++L P + N K
Sbjct: 35 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIEGNMKLH 94
Query: 63 KGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 119
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 95 YGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGLGTLRLLDATK 151
Query: 120 VTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 152 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 208
Query: 178 GLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAE 233
L + N P + F + I + + G + G+ R + + +D E
Sbjct: 209 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAKRDWGHAKDYVE 268
Query: 234 AFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
A +L E G V++V E+ + + K I
Sbjct: 269 AMWLMLQTDEPEDFVISTGEVHSVREFVEKAFMHIGKTI 307
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 74/326 (22%), Positives = 130/326 (39%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K +L+TG G S++ L+ + Y + I+ + +L P + +
Sbjct: 5 KVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLHY 64
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLEACKV-- 120
GD+ + +L I + AQ+HV SF +S E+T +++ GT LLEA +
Sbjct: 65 GDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSF-DSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 121 --TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
TG RF + E++G+ E + E + P +PY+ K + Y SY
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQE---IPQKETTPFYPRSPYACAKVYGHWQTVNYRESYD 180
Query: 179 LPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEA 234
L N P + F + I + I + G ++ G+ + R + Y +D A
Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRA 240
Query: 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN--RPFNDQRYFL 292
+L + E Y V T + V + + +++ + + F E RP
Sbjct: 241 MWAMLQQ-EQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLLIG 299
Query: 293 DDQKLTS-LGWSERTIWEEGLRKTIE 317
D K + LGW + E + +E
Sbjct: 300 DPAKTKAQLGWEPSVTFTELVHLMVE 325
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/182 (30%), Positives = 85/182 (46%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFKFV 62
K LITG G S++ L+ + Y + IV +++L + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 63 KGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 119
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIK 140
Query: 120 VTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 178 GL 179
L
Sbjct: 198 NL 199
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 62/260 (23%), Positives = 102/260 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D ++ +P +
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSV 59
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE +
Sbjct: 60 EFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 119
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 176
G ++ + S+ VYG + H TNPY +K E ++ R+
Sbjct: 120 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDLCRADTA 176
Query: 177 -------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-RGLPLPIHGD------GSN 221
Y P+ + P P L+P +A+ R L + GD G+
Sbjct: 177 WNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 236
Query: 222 VRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 237 VRDYIHVVDLAKGHIAALKK 256
>MGI|MGI:1921282 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family
42E, member 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
MGI:MGI:1921282 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 CTD:93517 HOGENOM:HOG000168007
OrthoDB:EOG40ZQZ0 EMBL:AK014586 EMBL:BC018550 EMBL:BC038819
IPI:IPI00108565 RefSeq:NP_083001.1 UniGene:Mm.296302
ProteinModelPortal:Q9D665 SMR:Q9D665 PhosphoSite:Q9D665
PaxDb:Q9D665 PRIDE:Q9D665 Ensembl:ENSMUST00000037955
Ensembl:ENSMUST00000173522 GeneID:74032 KEGG:mmu:74032
UCSC:uc009npd.1 InParanoid:Q9D665 OMA:FYNFQPF NextBio:339586
Bgee:Q9D665 Genevestigator:Q9D665 Uniprot:Q9D665
Length = 394
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 64/258 (24%), Positives = 115/258 (44%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+ + +LITG G+ + L N ++++ D NL P KFV
Sbjct: 6 FPEETVLITGGGGYFGFRLGCAL--NQKGARVILFDITQPAQNL----PE----GIKFVC 55
Query: 64 GDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GDI AD+ E + + H A+ N + + N+ GT +L AC G
Sbjct: 56 GDIRCLADVETAFQDAEKVACVFHVASYGMSGREQLNKTQIEEVNVGGTENILRACLERG 115
Query: 123 QIRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRS 176
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G +
Sbjct: 116 -VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLA 171
Query: 177 Y--GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
+ G ++ T R +YG + ++ +P+ + RGL ++GD ++ +++ +++
Sbjct: 172 FKQGDGILRTCAIRPAGIYGAGE--QRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNL 229
Query: 232 AEAFECILH--KGEVGHV 247
A+A K + GHV
Sbjct: 230 AKAHILASEALKADKGHV 247
>UNIPROTKB|Q4K8N6 [details] [associations]
symbol:wbpM "Nucleotide sugar epimerase/dehydratase WbpM"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0000271 GO:GO:0016857
eggNOG:COG1086 HOGENOM:HOG000257078 OMA:HVPMVEH RefSeq:YP_261397.1
ProteinModelPortal:Q4K8N6 STRING:Q4K8N6 GeneID:3478429
KEGG:pfl:PFL_4305 PATRIC:19878030 ProtClustDB:CLSK867780
BioCyc:PFLU220664:GIX8-4340-MONOMER Uniprot:Q4K8N6
Length = 664
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 65/276 (23%), Positives = 124/276 (44%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVK 63
+ +L+TGA G I S +C +++ P +++LD ++ NL +++ + S + VK
Sbjct: 298 QTVLVTGAGGSIGSELCRQILLQGPS-TLILLDHSEF--NLYSILSELEQRVSRESRLVK 354
Query: 64 -----GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
G + + + + ++ T S+DT+ H AA HV N E NN+ GT +A
Sbjct: 355 LLPILGSVRNYEKLLSVMRTWSVDTVYHAAAYKHVPMVEHNIAEGVLNNVMGTLNTAQAA 414
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEML---VMAYGR 175
G + F+ +STD+ T+ V+G+ +L + +K A +L + R
Sbjct: 415 LQCG-VANFVLISTDKAVRPTN---VMGS--TKRLAELTLQALSKELAPVLFDDLSNVSR 468
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
R NV G + +IP F G PL + ++ + Y + EA
Sbjct: 469 VNKTRFTMVRFGNVLGSSG---SVIPLFHKQIKSGGPLTV----THPKITRYFMTIPEAA 521
Query: 236 ECILHKGEVGH---VYNVGTKKERRVIDVAKDICKL 268
+ ++ G +G V+ + + R++++A+ + L
Sbjct: 522 QLVIQAGSMGQGGDVFVLDMGEPVRIVELAEKMIHL 557
>UNIPROTKB|Q9N119 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9823 "Sus scrofa" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:AF232699
RefSeq:NP_001004049.1 UniGene:Ssc.14393 ProteinModelPortal:Q9N119
STRING:Q9N119 Ensembl:ENSSSCT00000007360 Ensembl:ENSSSCT00000033231
Ensembl:ENSSSCT00000036493 GeneID:445539 KEGG:ssc:445539
SABIO-RK:Q9N119 ArrayExpress:Q9N119 Uniprot:Q9N119
Length = 373
Score = 140 (54.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 51/167 (30%), Positives = 76/167 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TG GF+ + + L+ +I VLDK+ + ++ SK S K ++GDI
Sbjct: 7 LVTGGGGFLGQRIVHLLLEEKDLQEIRVLDKV-FKPEVREEF-SKLQSKIKLTMLEGDIL 64
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ S+ ++H A+ V N+ G K N+ GT +LLEAC V + F
Sbjct: 65 DEQCLKGACQGASV--VIHTASIIDVVNAVGRE-TVMKVNVKGTQLLLEAC-VQASVPVF 120
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTN---PYSATKAGAEMLVM 171
IH S+ EV G V+ N L T PY +K AE V+
Sbjct: 121 IHTSSIEVAGPNSYREVIQNACEEDRLETAWSAPYPLSKKLAEKAVL 167
Score = 43 (20.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT W
Sbjct: 338 LGYEPLFTWEEAKQKTKAW 356
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 481 NYATGCIFEYDAAHPEGS-GIGYKEEDTPNFTGS-FYSKTKAMVEELLKEY 529
++ T C + ++ + +GY+ P FT KTKA V L+K++
Sbjct: 318 HFVTLCNSVFTVSYKKAQRDLGYE----PLFTWEEAKQKTKAWVGSLVKQH 364
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 68/267 (25%), Positives = 114/267 (42%)
Query: 70 DLVNFLLITESID--TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
DL + E ++ ++H AA + V + G + + N+ GT LLEA + R
Sbjct: 56 DLAALRRVVEEVEPEVVVHLAAISFV--AHGEADAIYRANVVGTRNLLEALAGLSRTPRA 113
Query: 128 IHV-STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ + S+ VYG + + E+ L P N Y+ +K E + + + LP++ R
Sbjct: 114 VLLASSANVYGNAPVELI---DESVSLAPANDYAVSKLAMEYMARLW--MHRLPIVIARP 168
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
N G Q LIPK + R + G+ R + VA A+ +L G
Sbjct: 169 FNYTGVGQASHFLIPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVVPAGQ 228
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSI--KFVENRPFNDQRYFLDDQKLTSL-GWS 303
V NVG+ + + +V + + + E + +FV R +R D +L L G
Sbjct: 229 VVNVGSGQVVSLREVLAMMSGISGHEIEVRVNPEFV--RANEVKRLQGDVSRLKELIGGY 286
Query: 304 ERTIWEEGLRKTIEWYTQN-PDWWGDV 329
+ T L +T+EW +N P+ G V
Sbjct: 287 QPT----PLMETLEWMFRNGPECIGSV 309
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 65/260 (25%), Positives = 103/260 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ IL+TG G+I SH LI + VV+D + +P KF+ I
Sbjct: 3 QKILVTGGGGYIGSHCVVELIE--AGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQI 60
Query: 67 A--SADLVNF-----LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
DL++ + S +MHFA V S + + N+ GT LLE +
Sbjct: 61 EFHELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQ 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM---AYGRS 176
G +R + S+ VYG+ + + H TNPY TK E ++ +
Sbjct: 121 SHG-VRNLVFSSSATVYGDPQKLPIDEQHPVGGC--TNPYGKTKYFIEEMIRDQCTAEKD 177
Query: 177 YG---LPVITTRGNNVYG-----PNQFPEKLIPKFILLAM-RGLPLPIHG------DGSN 221
+ L G ++ G P P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTG 237
Query: 222 VRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ + K
Sbjct: 238 VRDYIHVVDLAKGHIAAVRK 257
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 142 (55.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 57/193 (29%), Positives = 89/193 (46%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
L+TG GF+ HV L++ P ++ V D L + L+ L ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFD-LHLGAWLEEL--KTGPVQVTAIQGDVTQ 69
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKVTGQIRR 126
A V + + ++H A V FG + T + N+ GT ++EAC TG R
Sbjct: 70 AHEVAAAVAGAHV--VIHTAGLVDV---FGRASPETIYEVNVQGTKNVIEACVQTGT-RF 123
Query: 127 FIHVSTDEVYGET--DEDAVVGNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY--GLP 180
++ S+ EV G GN + + + +PY +KA AE LV+ A GR GLP
Sbjct: 124 LVYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHGGLP 183
Query: 181 VITT--RGNNVYG 191
++T R +YG
Sbjct: 184 LVTCALRPTGIYG 196
Score = 40 (19.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 294 DQKLTSLGWSERTIWEEGLRKTIEW 318
D+ G+ WE+ +TI W
Sbjct: 336 DKARRHFGYEPLFSWEDSRTRTIRW 360
>DICTYBASE|DDB_G0291730 [details] [associations]
symbol:DDB_G0291730 species:44689 "Dictyostelium
discoideum" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
dictyBase:DDB_G0291730 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AAFI02000182 GO:GO:0044237
RefSeq:XP_629990.1 ProteinModelPortal:Q54E72
EnsemblProtists:DDB0184034 GeneID:8628320 KEGG:ddi:DDB_G0291730
InParanoid:Q54E72 OMA:NERIGYY Uniprot:Q54E72
Length = 457
Score = 91 (37.1 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 7 KNILITGAAGFIASHVCNRLI-----RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF 61
+NILITG G++ S++ L+ +N Y +V +K + +K LI + NF
Sbjct: 5 ENILITGLTGYVGSNLIKVLLEDDSTKNNNVYALV-REKSSHSEFIKELI--EKYKNFNL 61
Query: 62 VKGDI--------ASADLVNFL--LITES-IDTIMHFAAQTHVDNSFGNSFEFT---KNN 107
+ GD + + + FL +IT + I I+H A+ +D NS +++ K N
Sbjct: 62 IIGDFVDLQSSVTSQSKCIEFLKSIITNNQIKVIIHLASM--MDFYPRNSIDYSNIHKTN 119
Query: 108 IYGTHVLLEA-CKVT 121
+ GT LL+A C T
Sbjct: 120 VIGTENLLKASCTST 134
Score = 86 (35.3 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNPYSATKAGAEMLVMAYGRSYGLPV 181
IRRFI+ ST E G + E P+ Y TK AE V Y + YGL
Sbjct: 196 IRRFIYCSTTETMGGKKPITGIPLSELDDPYSHPSYYYGETKRLAEDHVRRYEKKYGLDT 255
Query: 182 ITTRGNNVYGPN-QFPEKLIPKFILLAMRGLP--LPIHGDGSNVRSYLYCEDVAEAFECI 238
I R ++G + QF I + I G+ +P +G N+ Y + +D ++
Sbjct: 256 IILRPTGIFGKDDQFS---IFELIQSVSYGILFFIPSFANG-NIM-YTHIDDFIQSIMLS 310
Query: 239 LHK 241
+HK
Sbjct: 311 IHK 313
Score = 52 (23.4 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 287 DQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQN 322
+ R + +++ LG+ + +++GL TIE Y +N
Sbjct: 395 EDRIYSNERAKRELGFKPQYTFKQGLNVTIEEYLEN 430
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 143 (55.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 57/184 (30%), Positives = 87/184 (47%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--P-SKASSNFK 60
P+ + LITG G S++ L+ + Y + IV +++L P + N K
Sbjct: 19 PRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHTEGNMK 78
Query: 61 FVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA 117
GD+ S LV +I E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 79 LHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGLGTLRLLDA 135
Query: 118 CKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
K G I +F ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 136 TKTCGLINTVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 192
Query: 176 SYGL 179
+Y L
Sbjct: 193 AYNL 196
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 295 QKLTSLGWSERTIWEEGLRKTIE 317
Q LGW+ + ++E +++ +E
Sbjct: 335 QAKNKLGWTPKVSFDELVKEMVE 357
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 139 (54.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 67/263 (25%), Positives = 120/263 (45%)
Query: 76 LITESIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134
L+ D I+H A + + + +F +N+ +L + K G I++F+++S+
Sbjct: 47 LVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCG-IKQFLNLSSSC 105
Query: 135 VYGETDEDAVVGNHEA----SQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVI---TTRG 186
+Y DA+ E +L PTN Y+ K + L Y S+ P + T
Sbjct: 106 MY---PRDALNPLSEELILKGELEPTNEGYALAKIASTRLC-EY-ISHEEPELLYKTIIP 160
Query: 187 NNVYGPN-QF-PEK--LIP----KFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAE-AFE 236
N+YG + +F P +IP K I + L + I GDG R ++Y D+A+ F
Sbjct: 161 CNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFY 220
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
I + + NVG ++ + D + I ++ + K +P ++ +DD K
Sbjct: 221 AIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSG--TFKHDLTKPVGMKQKLIDDNK 278
Query: 297 LTSLGWSERTIWEEGLRKTIEWY 319
L + GWS +T EGL+ T++++
Sbjct: 279 LNAFGWSYKTDLTEGLKNTVQFF 301
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEY---KIVVLDKLDYCSNLKNLIPSK 54
IL+TGA G + ++ ++ + VL+ LD S L+ K
Sbjct: 3 ILLTGANGMVGKNILELASKHQHTFLTPSSKVLNLLDAASTQAYLVEHK 51
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 139 (54.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 67/263 (25%), Positives = 120/263 (45%)
Query: 76 LITESIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134
L+ D I+H A + + + +F +N+ +L + K G I++F+++S+
Sbjct: 47 LVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCG-IKQFLNLSSSC 105
Query: 135 VYGETDEDAVVGNHEA----SQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVI---TTRG 186
+Y DA+ E +L PTN Y+ K + L Y S+ P + T
Sbjct: 106 MY---PRDALNPLSEELILKGELEPTNEGYALAKIASTRLC-EY-ISHEEPELLYKTIIP 160
Query: 187 NNVYGPN-QF-PEK--LIP----KFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAE-AFE 236
N+YG + +F P +IP K I + L + I GDG R ++Y D+A+ F
Sbjct: 161 CNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFY 220
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
I + + NVG ++ + D + I ++ + K +P ++ +DD K
Sbjct: 221 AIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSG--TFKHDLTKPVGMKQKLIDDNK 278
Query: 297 LTSLGWSERTIWEEGLRKTIEWY 319
L + GWS +T EGL+ T++++
Sbjct: 279 LNAFGWSYKTDLTEGLKNTVQFF 301
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEY---KIVVLDKLDYCSNLKNLIPSK 54
IL+TGA G + ++ ++ + VL+ LD S L+ K
Sbjct: 3 ILLTGANGMVGKNILELASKHQHTFLTPSSKVLNLLDAASTQAYLVEHK 51
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 135 (52.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 72/280 (25%), Positives = 120/280 (42%)
Query: 6 PKNI-LITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--P-SKASSNFK 60
P+ + +ITG G S++ L+ + Y + I+ +++L P + N K
Sbjct: 20 PRKVAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTEGNMK 79
Query: 61 FVKGDIA-SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEAC 118
GD+ S LV + + + I + AQ+HV SF + E+T N + GT LL+A
Sbjct: 80 LHYGDLTDSTCLVKIINQVKPTE-IYNLGAQSHVKISFELA-EYTANVDGVGTLRLLDAI 137
Query: 119 KVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
K G +F ST E+YG+ E + E + P +PY A K A +V+ + +
Sbjct: 138 KTCGLTNSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 194
Query: 177 YGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVA 232
Y L + N P + F + I + + G L G+ + R + + +D
Sbjct: 195 YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQLESFSLGNLDSKRDWGHAKDYV 254
Query: 233 EAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
EA +L + E G V++V E+ V K I
Sbjct: 255 EAMWLMLQQEEPEDLVIATGEVHSVREFVEKSFKHVGKTI 294
Score = 46 (21.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 283 RPFNDQRYFLDD--QKLTSLGWSERTIWEEGLRKTIE 317
RP + Y D + LT LGW + +EE +++ ++
Sbjct: 323 RP-TEVEYLQGDSTKALTKLGWKAKITFEELVKEMVD 358
Score = 39 (18.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 484 TGCIF-EYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528
TG I + D+ + + + Y + D+ K K EEL+KE
Sbjct: 310 TGVIHVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFEELVKE 355
>UNIPROTKB|J9NYA9 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:93517 OMA:FYNFQPF
EMBL:AAEX03004035 RefSeq:XP_546811.2 ProteinModelPortal:J9NYA9
Ensembl:ENSCAFT00000043975 GeneID:489691 KEGG:cfa:489691
Uniprot:J9NYA9
Length = 393
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 63/260 (24%), Positives = 115/260 (44%)
Query: 2 ATYTPKN-ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
A +PK +LITG G+ + L N + +++ D S+ + IP +
Sbjct: 3 AQKSPKETVLITGGGGYFGFRLGCAL--NQKGFHVILFD----ISSPTHSIPE----GIE 52
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F++GDI V + + H A+ N + N+ GT +L+ C+
Sbjct: 53 FIRGDIRHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRSLIEEVNVGGTDNILQVCRR 112
Query: 121 TGQIRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYG 174
G + R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G
Sbjct: 113 RG-VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEASG 168
Query: 175 ----RSYG-LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229
RS G L R +YGP + ++ +P+ + RGL ++GD ++ +++ +
Sbjct: 169 TTLLRSDGVLRTCALRPAGIYGPGE--QRHLPRIVSYIERGLFKFVYGDPRSLVEFVHVD 226
Query: 230 DVAEAFECILH--KGEVGHV 247
++ +A K + GH+
Sbjct: 227 NLVQAHILASEALKADKGHI 246
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 62/261 (23%), Positives = 105/261 (40%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D ++ +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L + ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGN-HEASQLLPTNPYSATKAGAEMLVMAYGRS-- 176
G ++ + S+ VYG+ + G H T PY +K E ++ R+
Sbjct: 121 AMG-VKSLVFSSSATVYGKPVPASGRGPPHRGC----TKPYGKSKFFIEEMIQDLCRADT 175
Query: 177 --------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-RGLPLPIHGD------GS 220
Y +P+ R + P P L+P +A+ R L + GD G+
Sbjct: 176 AWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGT 235
Query: 221 NVRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 236 GVRDYIHVVDLAKGHIAALKK 256
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 143 (55.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEY-KIVVLDKL--DYCSNLKNLIPSKASSNFKFVKGDI 66
L+TG GF+ HV L++ P ++ V D+ + LK P + ++ ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTG-PVRVTA----IQGDV 67
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKVTGQI 124
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 125 RRFIHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY--G 178
R ++ S+ EV G + GN + + + +PY +KA AE LV+ A GR G
Sbjct: 122 RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKVRGG 181
Query: 179 LPVITT--RGNNVYG 191
LP++T R +YG
Sbjct: 182 LPLVTCALRPTGIYG 196
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 294 DQKLTSLGWSERTIWEEGLRKTIEW 318
D+ G+ WE+ +TI W
Sbjct: 336 DKAQRHFGYEPLFSWEDSRTRTILW 360
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 51/180 (28%), Positives = 84/180 (46%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIP-SKA--SSNFKFV 62
K LITG G S++ L+ + Y + IV +++L S+A N K
Sbjct: 10 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKLH 69
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVT 121
GD+ + + ++ + I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 70 YGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKTC 128
Query: 122 GQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
G I +F ST E++G+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 129 GLINSVKFYQASTSELFGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 185
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 131 (51.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 64/235 (27%), Positives = 99/235 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ LDK+ + + + ++GDI A
Sbjct: 7 LVTGAGGFVGQRIIKMLVQEKELQEVRALDKVFRPETKEEFSKLQTKTKVTVLEGDILDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H AA V N+ GT LLEAC V + FI
Sbjct: 67 QCLR--RACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-VQASVPAFIF 122
Query: 130 VSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYGRSY----G-LPV 181
S+ +V G +V N HE T +PY +K AE V+A S G L
Sbjct: 123 CSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLNT 182
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMR--GLPLPIHGDGSNVRSYLYCEDVAEA 234
R +YG P I I+ A++ G+ L + G S + + +Y E+VA A
Sbjct: 183 CALRPMYIYGERS-P--FIFNAIIRALKNKGI-LCVTGKFS-IANPVYVENVAWA 232
Score = 50 (22.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLVNWEEAKQKTSEW 356
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 130 (50.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 46/166 (27%), Positives = 70/166 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ +I VLDK+ + S ++GDI
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEKDLEEIRVLDKVFKPETREQFFNLGTSIKVTVLEGDILDT 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H AA V N+ GT LLEAC + + FI
Sbjct: 67 QYLR--RACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 130 VSTDEVYGETD-EDAVVGNHEASQLLPT--NPYSATKAGAEMLVMA 172
S+ +V G +D V+ HE T +PY +K AE V+A
Sbjct: 123 SSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEKAVLA 168
Score = 51 (23.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLVSWEEAKQKTSEW 356
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 129 (50.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 43/166 (25%), Positives = 71/166 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ LDK+ + + + ++GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H AA V + N+ GT +LEAC V + FI+
Sbjct: 67 QYLR--RACQGISVVIHTAAVIDVSHVLPRQ-TILDVNLKGTQNILEAC-VEASVPAFIY 122
Query: 130 VSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
ST +V G ++ N HE T + Y +K AE V+A
Sbjct: 123 CSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEKAVLA 168
Score = 52 (23.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 284 PFNDQRYFLDDQKLT--------SLGWSERTIWEEGLRKTIEW 318
PFN L + K T LG+ WEE +KT EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYVPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 61/260 (23%), Positives = 102/260 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D ++ +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L + ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 176
G ++ + S+ VYG + H TNPY +K E ++ R+
Sbjct: 121 AHG-VKSLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIQDLCRADTA 177
Query: 177 -------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-RGLPLPIHGD------GSN 221
Y P+ + P P L+P +A+ R L + GD G+
Sbjct: 178 WNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 237
Query: 222 VRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 238 VRDYIHVVDLAKGHIAALKK 257
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 59/234 (25%), Positives = 100/234 (42%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG G S++ L+ + Y + I + ++ P + F
Sbjct: 3 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 62
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTG 122
GD++ + +L D + + A +HV SF S E+T + + GT LLEA + G
Sbjct: 63 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSF-ESPEYTADVDAMGTLRLLEAIRFLG 121
Query: 123 QIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+ RF ST E+YG E + E + P +PY+ K A + + Y SYG+
Sbjct: 122 LEKKTRFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178
Query: 181 VITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCED 230
N P + F + I + I +GL ++ G+ ++R + + +D
Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 232
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
+I G GF+ +HV + L + + +I+V+D K + K SN ++K
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVVDPCP--QEFKTIKIDK--SNISYIKASFLDD 60
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
++ +L ++H AA H G+ N+ GT L++ CK G ++RF++
Sbjct: 61 KVLENIL--NGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALG-VKRFLY 117
Query: 130 VSTDEV--YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
S+ V GE ++ + + YSA+KA AE V++ + R
Sbjct: 118 ASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQSTP-DFKTVCLRFR 176
Query: 188 NVYGP 192
+YGP
Sbjct: 177 GIYGP 181
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 127 (49.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 51/170 (30%), Positives = 76/170 (44%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TGA G + + L+ +I LDK + L+ SK + K ++GDI
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKA-FRPELREEF-SKLQNRTKLTVLEGDIL 63
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKVTGQIR 125
+ + + ++H A V FG + E N N+ GT +LLEAC V +
Sbjct: 64 DEPFLK--RACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 117
Query: 126 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 118 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLA 167
>RGD|1308481 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family 42E,
member 1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 RGD:1308481 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OrthoDB:EOG40ZQZ0 IPI:IPI00768842
Ensembl:ENSRNOT00000030725 UCSC:RGD:1308481 Uniprot:D3ZZI8
Length = 278
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 61/257 (23%), Positives = 113/257 (43%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+ + +LITG G+ + L N ++++ D ++ NL P FV+
Sbjct: 6 FPEETVLITGGGGYFGFRLGCAL--NQKGVRVILFDIIEPAQNL----PE----GITFVR 55
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI V I + H A+ N + N+ GT +L+AC G
Sbjct: 56 GDIRCLSDVEAAFQDADIACVFHIASYGMSGREQLNKTRIEEVNVGGTENILQACLGRG- 114
Query: 124 IRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRSY 177
+ ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G ++
Sbjct: 115 VPSLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLAF 171
Query: 178 --GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
G V+ T R +YG + ++ +P+ + RGL ++GD ++ +++ +++A
Sbjct: 172 KQGDGVLRTCAIRPAGIYGAGE--QRHLPRVVSYIERGLFRFVYGDPQSLVEFVHVDNLA 229
Query: 233 EAFECILH--KGEVGHV 247
+A K + GH+
Sbjct: 230 KAHILASEALKADKGHI 246
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 122 (48.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK----NLIPSKASSNFKFVKG 64
+LITG G+I S L+ N +Y +V++D L S + LI K +
Sbjct: 6 VLITGGTGYIGSFTSLALLEN--DYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNVDIT 63
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D A+ D V F E ID+++HFAA V S E+ + N+ G+ LL + + +
Sbjct: 64 DEAALDKV-FDAHPE-IDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQ-KHNV 120
Query: 125 RRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
+ S+ VYG+ T ++ E + PTN Y TK+ E ++
Sbjct: 121 CNIVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVI 167
Score = 57 (25.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/112 (21%), Positives = 45/112 (40%)
Query: 218 DGSNVRSYLYCEDVAEAFECILH---KGEVG-HVYNVGTKKERRVIDVAKDICKLFSMDP 273
DG+ +R Y++ D+A+ L+ + G +N+G+ + V ++ K + D
Sbjct: 244 DGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDL 303
Query: 274 ETSIKFVENRPFNDQRYFLDDQKLTS--LGWSERTIWEEGLRKTIEWYTQNP 323
+ V R D + L + LGW E+ + +W NP
Sbjct: 304 PYEV--VPRRQ-GDVLDLTANPALANKELGWKTELRMEDACQDLWKWVKNNP 352
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/261 (24%), Positives = 102/261 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D K +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ G+ LLE +
Sbjct: 61 EFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-------A 172
G ++ + S+ VYG + H TNPY +K E ++ A
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKYFIEEMIRDLCQADKA 177
Query: 173 YGR---SYGLPVITTRGNNVYG--PNQFPEKLIPKFILLAM-RGLPLPIHG------DGS 220
+ Y P I + G P P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNP-IGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGT 236
Query: 221 NVRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 70/284 (24%), Positives = 119/284 (41%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+LI G GFI +H+ RL+R Y++ LD D S N +F FV+GDI+
Sbjct: 318 VLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLN------HPHFHFVEGDIS 370
Query: 68 -SADLVNFLLITESIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
++ + + + + D ++ A T ++ + N + + ++ C +
Sbjct: 371 IHSEWIEYHV--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYC--VKYRK 425
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTN-P---YSATKAGAEMLVMAYGRSYGLPV 181
R I ST EVYG + +H + P N P YS +K + ++ AYG GL
Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 485
Query: 182 ITTRGNNVYGP---NQFPEKL-----IPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R N GP N ++ I + IL + G P+ + G R + D E
Sbjct: 486 TLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE 545
Query: 234 A-FECILHKGEV--GHVYNVGT-KKERRVIDVAKDICKLFSMDP 273
A + I + G G + N+G + E + ++ + + F P
Sbjct: 546 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 127 (49.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/166 (24%), Positives = 73/166 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ VL + + + L + + ++GDI A
Sbjct: 7 LVTGAGGFLGQRIVQMLVQEKELQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRGDIVDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + + I+H AA + N+ GT +LL+AC V + FI+
Sbjct: 67 QFLR--RACQGMSVIIHTAAALDIAGFLPRQ-TILDVNVKGTQLLLDAC-VEASVPAFIY 122
Query: 130 VSTDEVYGETD-EDAVVGNHEASQLLPT--NPYSATKAGAEMLVMA 172
S+ V G ++ ++ + E T NPY +K AE V+A
Sbjct: 123 SSSTGVAGPNSYKETILNDREEEHRESTWSNPYPYSKRMAEKAVLA 168
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEY-KIVVLDKL--DYCSNLKNLIPSKASSNFKFVKGDI 66
L+TG GF+ HV L++ P ++ V D+ + LK P + ++ ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTG-PVRVTA----IQGDV 67
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKVTGQI 124
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 125 RRFIHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGR 175
R ++ S+ EV G + GN + + + +PY +KA AE LV+ A GR
Sbjct: 122 RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGR 176
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 7 KNILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPS-KA--SSNFKFV 62
K LITG G S++ L++ +Y + I+ + +++L KA K
Sbjct: 47 KVALITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKLH 106
Query: 63 KGDIA-SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKV 120
GD+ S+ LV + + + + I + AAQ+HV SF S E+T + GT +L+A +
Sbjct: 107 YGDMTDSSSLVKIINMVKPTE-IYNLAAQSHVKVSFDLS-EYTAEVDAVGTLRILDAIRT 164
Query: 121 TGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
G + RF ST E+YG+ E +E + P +PY+ K +V+ Y +Y
Sbjct: 165 CGMEKNVRFYQASTSELYGKVVETP---QNEQTPFYPRSPYACAKMYGFWIVINYREAYN 221
Query: 179 L 179
+
Sbjct: 222 M 222
>UNIPROTKB|P14893 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9913 "Bos taurus" [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0031966 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:X17614 EMBL:BC111203
IPI:IPI00703764 PIR:S07102 RefSeq:NP_776768.1 UniGene:Bt.111390
ProteinModelPortal:P14893 STRING:P14893 PRIDE:P14893
Ensembl:ENSBTAT00000010992 GeneID:281824 KEGG:bta:281824
InParanoid:P14893 NextBio:20805734 Uniprot:P14893
Length = 373
Score = 128 (50.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 50/168 (29%), Positives = 77/168 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TG GF+ + L+ +I VLDK+ + ++ SK S K ++GDI
Sbjct: 7 LVTGGGGFLGQRIICLLVEEKDLQEIRVLDKV-FRPEVREEF-SKLQSKIKLTLLEGDIL 64
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTGQIRR 126
+ S+ ++H A+ V N+ E N N+ GT +LLEAC V +
Sbjct: 65 DEQCLKGACQGTSV--VIHTASVIDVRNAVPR--ETIMNVNVKGTQLLLEAC-VQASVPV 119
Query: 127 FIHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM 171
FIH ST EV G ++ G E + ++PY +K AE V+
Sbjct: 120 FIHTSTIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEKAVL 167
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLYTWEEAKQKTKEW 356
>TAIR|locus:2051063 [details] [associations]
symbol:AT2G33630 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:AC002332
HOGENOM:HOG000168007 UniGene:At.48546 UniGene:At.64420
EMBL:AF428460 EMBL:AY093003 IPI:IPI00531432 PIR:H84747
RefSeq:NP_180921.1 ProteinModelPortal:O22813 SMR:O22813
PaxDb:O22813 PRIDE:O22813 EnsemblPlants:AT2G33630.1 GeneID:817929
KEGG:ath:AT2G33630 TAIR:At2g33630 InParanoid:O22813 OMA:KAYFLSN
PhylomeDB:O22813 ProtClustDB:CLSN2683500 ArrayExpress:O22813
Genevestigator:O22813 Uniprot:O22813
Length = 480
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 60/238 (25%), Positives = 107/238 (44%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEY--KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
++TG GF+ + +C L+R + + +LKN S + ++GD+
Sbjct: 15 VVTGGLGFVGAALCLELVRRGARQVRSFDLRHSSPWSDDLKN-------SGVRCIQGDVT 67
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
V+ L + D ++H A+ + NI GT +LEA +I R
Sbjct: 68 KKQDVDNAL--DGADCVLHLASYGMSGKEMLRFGRCDEVNINGTCNVLEAA-FKHEITRI 124
Query: 128 IHVST-DEVYGETDEDAVVGNHEASQLLP----TNPYSATKAGAEMLVM-AYGRSY---G 178
++VST + V+G + ++ +E P + YS TK+ AE LV+ + GR + G
Sbjct: 125 VYVSTYNVVFGGKE---ILNGNEGLPYFPLDDHVDAYSRTKSIAEQLVLKSNGRPFKNGG 181
Query: 179 LPVITT--RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
+ T R +YGP + ++ +P+ + L GL L G+ S ++Y E++ A
Sbjct: 182 KRMYTCAIRPAAIYGPGE--DRHLPRIVTLTKLGLALFKIGEPSVKSDWIYVENLVLA 237
>TAIR|locus:2051008 [details] [associations]
symbol:CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like
1" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0009809 "lignin biosynthetic process" evidence=ISS] [GO:0016621
"cinnamoyl-CoA reductase activity" evidence=ISS] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009408 "response to heat"
evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0046686
GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000167998 EMBL:AC002332 EMBL:AY120714
EMBL:AY084584 EMBL:BT000055 IPI:IPI00536249 PIR:D84747
RefSeq:NP_180917.1 UniGene:At.19951 ProteinModelPortal:O22809
SMR:O22809 STRING:O22809 PaxDb:O22809 PRIDE:O22809
EnsemblPlants:AT2G33590.1 GeneID:817925 KEGG:ath:AT2G33590
TAIR:At2g33590 InParanoid:O22809 OMA:DEACWSD PhylomeDB:O22809
ProtClustDB:CLSN2683499 ArrayExpress:O22809 Genevestigator:O22809
Uniprot:O22809
Length = 321
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 73/330 (22%), Positives = 136/330 (41%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF 59
MA + +TGA GF+ S V + L+ ++Y + V + ++LK L KA
Sbjct: 1 MADVHKGKVCVTGAGGFLGSWVVDLLLSKDYFVHGTVRDPDNEKYAHLKKL--EKAGDKL 58
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
K K D+ D + + H A + E + GT +L+AC
Sbjct: 59 KLFKADLL--DYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKAC- 115
Query: 120 VTGQIRRFIHVST------DEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVM 171
+ ++R ++VS+ + ++ + ++A + E + N Y K AE
Sbjct: 116 IEANVKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTE-NWYCLAKTRAESEAF 174
Query: 172 AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
+ + GL +++ V GP + + L+ ++ L + R + DV
Sbjct: 175 EFAKRTGLHLVSVCPTLVLGPI-LQQNTVNASSLVLLKLLKEGFETRDNQERHLVDVRDV 233
Query: 232 AEAFECILHKGEV-G-HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
A+A + K E G ++ T KE V++ K ++ P+ K+++ + R
Sbjct: 234 AQALLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHYNY-PK---KYIDA----EDR 285
Query: 290 YFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ +KL LGW+ R + EE L ++E Y
Sbjct: 286 VKVSSEKLQKLGWTYRPL-EETLVDSVESY 314
>ZFIN|ZDB-GENE-030828-2 [details] [associations]
symbol:hsd3b2 "hydroxy-delta-5-steroid dehydrogenase,
3 beta- and steroid delta-isomerase 2" species:7955 "Danio rerio"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;IMP] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-030828-2 CTD:3283 HOVERGEN:HBG000014 KO:K00070
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AY279108 IPI:IPI00500056 RefSeq:NP_997962.1 UniGene:Dr.119436
ProteinModelPortal:Q7ZZC3 STRING:Q7ZZC3 GeneID:373131
KEGG:dre:373131 InParanoid:Q7ZZC3 NextBio:20813390
ArrayExpress:Q7ZZC3 Uniprot:Q7ZZC3
Length = 374
Score = 122 (48.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/191 (24%), Positives = 82/191 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
++TGA GF+ + L+ +I +LD+ ++ L + + ++GDI
Sbjct: 9 VVTGACGFLGEKLVRLLLEEENLSEIRLLDRNIRSELIQTLEDGRGETKVSVIEGDIRDR 68
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+L+ + + H A+ + + S E N+ T +LLE C + + FI+
Sbjct: 69 ELLR--RACKGATLVFHTASLIDYNGAVEYS-ELHAVNVKATRLLLETC-IQQSVSSFIY 124
Query: 130 VSTDEVY-GETDEDAVVGNHEASQL--LPTNPYSATKAGAEMLVM-AYG---RSYG-LPV 181
S+ EV + ++ HE + P + YS TK AE + + A G R G L
Sbjct: 125 TSSIEVACPNRSGEPIINGHEDTPYSSYPISNYSKTKQEAEQICLQANGELLRDGGHLAT 184
Query: 182 ITTRGNNVYGP 192
R +YGP
Sbjct: 185 CALRPMFIYGP 195
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 282 NRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEW 318
N PF+ F + G+S R WEE R T +W
Sbjct: 327 NTPFS----FSYQKACREFGYSPRYDWEEARRSTTDW 359
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/260 (24%), Positives = 101/260 (38%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE K
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY---GRS 176
G ++ + S+ VYG + H TNPY +K E ++ ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDLCQADKT 177
Query: 177 YG---LPVITTRGNNVYG-----PNQFPEKLIPKFILLAM-RGLPLPIHG------DGSN 221
+ L G + G P P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 222 VRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 238 VRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 127 (49.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 51/170 (30%), Positives = 76/170 (44%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF--VKGDIA 67
L+TGA G + + L+ +I LDK + L+ SK + K ++GDI
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKA-FRPELREEF-SKLQNRTKLTVLEGDIL 63
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKVTGQIR 125
+ + + ++H A V FG + E N N+ GT +LLEAC V +
Sbjct: 64 DEPFLK--RACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 117
Query: 126 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 118 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLA 167
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 308 WEEGLRKTIEW 318
WEE +KT+EW
Sbjct: 345 WEEAKQKTVEW 355
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 63/224 (28%), Positives = 97/224 (43%)
Query: 58 NFKFVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
N K GD+ S LV +I E T I + AQ+HV SF + E+T + + GT L
Sbjct: 50 NMKLHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRL 106
Query: 115 LEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
L+A K G I +F ST E+YG+ E + E + P +PY A K A +V+
Sbjct: 107 LDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVN 163
Query: 173 YGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYC 228
+ +Y L + N P + F + I + + G L G+ R + +
Sbjct: 164 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 223
Query: 229 EDVAEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
+D EA +L E G V++V E+ + + K I
Sbjct: 224 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 267
>MGI|MGI:104645 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 5" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:104645 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0005743 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:L41519 EMBL:BC012715
IPI:IPI00314189 PIR:A57559 RefSeq:NP_032321.2 UniGene:Mm.17910
ProteinModelPortal:Q61694 SMR:Q61694 STRING:Q61694
PhosphoSite:Q61694 PaxDb:Q61694 PRIDE:Q61694
Ensembl:ENSMUST00000044094 GeneID:15496 KEGG:mmu:15496
UCSC:uc008qpw.2 CTD:15496 InParanoid:Q61694 OMA:DACVEAS
NextBio:288382 Bgee:Q61694 Genevestigator:Q61694
GermOnline:ENSMUSG00000038092 GO:GO:0035634 Uniprot:Q61694
Length = 373
Score = 124 (48.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 45/167 (26%), Positives = 76/167 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ +I L + + + L + + + +KGDI A
Sbjct: 7 LVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKHEEELSKLQTKAKVRVLKGDILDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKVTGQIRRFI 128
+ + + ++H AA +D S + + N+ GT +LL+AC V + FI
Sbjct: 67 QCLK--RACQGMSAVIHTAAA--IDPLGAASRQTILDVNLKGTQLLLDAC-VEASVPTFI 121
Query: 129 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 172
+ S+ V G ++ N HE T NPY +K AE V+A
Sbjct: 122 YSSSVLVAGPNSYKEIILNAHEEEHRESTWPNPYPYSKRMAEKAVLA 168
Score = 51 (23.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYQPLVSWEEAKQKTSEW 356
Score = 37 (18.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 568 MTVLDELLPISIEMAKRNL 586
+TVL+ + IS + A+R+L
Sbjct: 320 ITVLNSVFTISYKKAQRDL 338
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 121 (47.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 59/234 (25%), Positives = 96/234 (41%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ LDK+ + + + ++GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H A+ N+ GT LLEA + + FI+
Sbjct: 67 QYLR--RACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 130 VSTDEVYGETDEDAVVGN---HEASQLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 181
ST +V G + N E + +NPY +K AE V+A S G L
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 182 ITTRGNNVYGPN-QFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R +YG QF ++I + L +G+ L + G S V +Y +VA A
Sbjct: 183 CALRPMYIYGERGQFLSRII--IMALKNKGV-LNVTGKFSIVNP-VYVGNVAWA 232
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 284 PFNDQRYFLDDQKLT--------SLGWSERTIWEEGLRKTIEW 318
PFN L + K T LG+ WEE +KT EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 121 (47.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 59/234 (25%), Positives = 96/234 (41%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ ++ LDK+ + + + ++GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H A+ N+ GT LLEA + + FI+
Sbjct: 67 QYLR--RACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 130 VSTDEVYGETDEDAVVGN---HEASQLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 181
ST +V G + N E + +NPY +K AE V+A S G L
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 182 ITTRGNNVYGPN-QFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R +YG QF ++I + L +G+ L + G S V +Y +VA A
Sbjct: 183 CALRPMYIYGERGQFLSRII--IMALKNKGV-LNVTGKFSIVNP-VYVGNVAWA 232
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 284 PFNDQRYFLDDQKLT--------SLGWSERTIWEEGLRKTIEW 318
PFN L + K T LG+ WEE +KT EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 58/255 (22%), Positives = 113/255 (44%)
Query: 65 DIASADLVNFLLIT-ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D+ + D LL ++ DT++ AA+ N+ N+ +V+ E +
Sbjct: 47 DLLNPDATEQLLKQLQASDTLVITAAEAPCKNA-----AMLYRNVRMMNVVCEVLQKQA- 100
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
I++ I++S+D VY ++D+ E S PT+ + EM++ + + +
Sbjct: 101 IQQVIYISSDAVYADSDQPLT----ETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAI 156
Query: 184 TRGNNVYGPNQFPEKLIP-KFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R + +YG P +F LA + + G+G R ++Y +DVAE ++ +
Sbjct: 157 LRPSLLYGAEDPHNGYGPNRFRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVIQRC 216
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR---PFNDQRYF-LDDQKLT 298
G V N+ T + +A+ + +L + E +I+ + P N R F + D +
Sbjct: 217 SRG-VLNIATGQVISFKQLAEKVVQL--SNNEVAIQPSPRQGSMPHNGYRPFDITDCQKA 273
Query: 299 SLGWSERTIWEEGLR 313
+S +I E+GL+
Sbjct: 274 FPDFSYTSI-EDGLQ 287
Score = 57 (25.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 5 TPKNILITGAAGFIASHVCNRL 26
TP +++ GA GF+ +C RL
Sbjct: 10 TPSRVVVLGANGFVGRALCQRL 31
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 58/255 (22%), Positives = 113/255 (44%)
Query: 65 DIASADLVNFLLIT-ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D+ + D LL ++ DT++ AA+ N+ N+ +V+ E +
Sbjct: 47 DLLNPDATEQLLKQLQASDTLVITAAEAPCKNA-----AMLYRNVRMMNVVCEVLQKQA- 100
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
I++ I++S+D VY ++D+ E S PT+ + EM++ + + +
Sbjct: 101 IQQVIYISSDAVYADSDQPLT----ETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAI 156
Query: 184 TRGNNVYGPNQFPEKLIP-KFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R + +YG P +F LA + + G+G R ++Y +DVAE ++ +
Sbjct: 157 LRPSLLYGAEDPHNGYGPNRFRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVIQRC 216
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR---PFNDQRYF-LDDQKLT 298
G V N+ T + +A+ + +L + E +I+ + P N R F + D +
Sbjct: 217 SRG-VLNIATGQVISFKQLAEKVVQL--SNNEVAIQPSPRQGSMPHNGYRPFDITDCQKA 273
Query: 299 SLGWSERTIWEEGLR 313
+S +I E+GL+
Sbjct: 274 FPDFSYTSI-EDGLQ 287
Score = 57 (25.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 5 TPKNILITGAAGFIASHVCNRL 26
TP +++ GA GF+ +C RL
Sbjct: 10 TPSRVVVLGANGFVGRALCQRL 31
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 11 ITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASAD 70
+TGA GF+ +C RLI K+ + Y L+ L V+GD+ + +
Sbjct: 58 VTGAGGFLGKAICQRLIA--AGIKVTGFARGRYLE-LEAL-------GVTMVQGDLVNPE 107
Query: 71 LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130
V + + D + H A++ V +G+ + N+ G ++ ACK +I + ++
Sbjct: 108 QVKQAM--QGCDIVFHVASKAGV---WGDRDSYFCPNVKGAANVIAACKAL-KINKLVYT 161
Query: 131 STDEV-YGETDEDAV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS------YGLPVI 182
ST V + DE + AS+ L N Y+ +KA AE +++ +S Y L +
Sbjct: 162 STPSVTFAGEDESGINESTPYASRFL--NYYAHSKAIAEKMMLDANQSSSTNAAYVLKTV 219
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
R + ++GPN P L+P+ + G L + G + +Y ++ A A
Sbjct: 220 ALRPHLIWGPND-PH-LVPRVLARGRLG-KLKLVGREDKLVDTIYIDNAAYA 268
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 63/224 (28%), Positives = 97/224 (43%)
Query: 58 NFKFVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
N K GD+ S LV +I E T I + AQ+HV SF + E+T + + GT L
Sbjct: 49 NMKLHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRL 105
Query: 115 LEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
L+A K G I +F ST E+YG+ E + E + P +PY A K A +V+
Sbjct: 106 LDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVN 162
Query: 173 YGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYC 228
+ +Y L + N P + F + I + + G L G+ R + +
Sbjct: 163 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 222
Query: 229 EDVAEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
+D EA +L E G V++V E+ + + K I
Sbjct: 223 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 266
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 63/224 (28%), Positives = 97/224 (43%)
Query: 58 NFKFVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
N K GD+ S LV +I E T I + AQ+HV SF + E+T + + GT L
Sbjct: 50 NMKLHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRL 106
Query: 115 LEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
L+A K G I +F ST E+YG+ E + E + P +PY A K A +V+
Sbjct: 107 LDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVN 163
Query: 173 YGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYC 228
+ +Y L + N P + F + I + + G L G+ R + +
Sbjct: 164 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 223
Query: 229 EDVAEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
+D EA +L E G V++V E+ + + K I
Sbjct: 224 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 267
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 99 NSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH--EASQLLPT 156
N + K N GT +L K G R + ST EVYG+ + ++ + + P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 60
Query: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLP 214
Y K AE + AY + G+ V R N +GP +++ FIL A++G PL
Sbjct: 61 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 120
Query: 215 I 215
+
Sbjct: 121 V 121
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 77/330 (23%), Positives = 139/330 (42%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+LI G GFI +H+ RL+R+ +Y + LD D L++ NF FV+GDI+
Sbjct: 321 VLILGVNGFIGNHLSERLLRD-DKYDVYGLDIGSDAIERLRS------HPNFHFVEGDIS 373
Query: 68 -SADLVNFLLITESIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
++ + + + + D ++ A T ++ + N + + L+ C +
Sbjct: 374 IHSEWIEYHI--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLKLVRYCVKYN--K 428
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNP----YSATKAGAEMLVMAYGRSYGL 179
R I ST EVYG + + + S L+ P N YS +K + ++ AYG GL
Sbjct: 429 RVIFPSTSEVYGMCQDKNF--DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GL 485
Query: 180 PVITTRGNNVYGPNQF--------PEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
R N GP + I + IL + G P+ + G R + D
Sbjct: 486 NFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADG 545
Query: 232 AEAFECIL-HKGEV--GHVYNVGTK-KERRVIDVAKDICKLF-------SMDPETSIKFV 280
EA I+ ++ + G + N+G E + + +++ + F + P + V
Sbjct: 546 IEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDV 605
Query: 281 ENRPFNDQRYFLDDQKLTSLGWSERTI-WE 309
E++ F Y + + S+ ++R + WE
Sbjct: 606 ESKAFYGAGYQDVEHRKPSIDNAKRLLNWE 635
>TIGR_CMR|CPS_0594 [details] [associations]
symbol:CPS_0594 "polysaccharide biosynthesis protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1086
HOGENOM:HOG000257078 RefSeq:YP_267344.1 ProteinModelPortal:Q489C0
STRING:Q489C0 DNASU:3518931 GeneID:3518931 KEGG:cps:CPS_0594
PATRIC:21464517 OMA:HVPMVEH ProtClustDB:CLSK907040
BioCyc:CPSY167879:GI48-681-MONOMER Uniprot:Q489C0
Length = 646
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/183 (22%), Positives = 81/183 (44%)
Query: 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL--KNLIPSKASSNF 59
A K +++TGA G I S +C ++IR P K+V+ + ++ K L K +
Sbjct: 276 ADIADKVVMVTGAGGSIGSELCRQIIRLKPT-KLVLFELSEFGLYTIDKELNEYKQQHDL 334
Query: 60 KF----VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
+ G + + + ++ + ++ T+ H AA HV N E +NN++GT+
Sbjct: 335 AVEVLPLLGSVQRVNRIETVMKSFAVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTYYAA 394
Query: 116 EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
A + + F+ +STD+ T+ ++G + L + T+ ++ +G
Sbjct: 395 RAA-INANVETFVLISTDKAVRPTN---IMGTTKRMAELVLQALAKTQHSTRFCMVRFGN 450
Query: 176 SYG 178
G
Sbjct: 451 VLG 453
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 120 (47.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 52/197 (26%), Positives = 83/197 (42%)
Query: 37 VLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNS 96
+LDK Y N+ ++ +F GD+ + + + L + + H A+ S
Sbjct: 29 LLDK-GYSVNVFDIQKRFDHDRVQFFLGDLCNKEAL--LPALQDVSVAFHCASPAP---S 82
Query: 97 FGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-P 155
N F K N GT ++EACK G +++ + S+ V E D G + P
Sbjct: 83 SDNKELFYKVNFMGTKAVIEACKEAG-VQKLVLTSSASVVFE-GTDIKNGTEDLPYAKKP 140
Query: 156 TNPYSATKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLP 214
+ Y+ TK E V+ A R + ++GP P+ L+P I A G
Sbjct: 141 IDYYTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGPRD-PQ-LVPILIQAAKSGKMKF 198
Query: 215 IHGDGSNVRSYLYCEDV 231
I GDG N+ + Y E+V
Sbjct: 199 IIGDGKNLVDFTYVENV 215
Score = 52 (23.4 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1 MATY---TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD 39
MAT+ T K ++ G +GF+ H+ +L+ Y + V D
Sbjct: 1 MATHFRSTGKKCVVIGGSGFLGQHMVEKLLDK--GYSVNVFD 40
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 75/316 (23%), Positives = 124/316 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIV-VLDKLDYCSNLKNLIPS-KASSNFKFVKG 64
K +L+TG GFI +HV +L++ Y++ + ++ L L P K F VK
Sbjct: 4 KLVLVTGVTGFIGAHVAEQLLQ--AGYRVRGTVRSMEKADELIRLNPGLKDKIEFVIVK- 60
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+++++ + +L + ++ I H A+ V+N N + + GT +LEA + I
Sbjct: 61 DVSASNAFDGVL--KDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSI 118
Query: 125 RRFIHVST-------------DEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM 171
+R + S+ ++VY E D + + + Y A+K AE
Sbjct: 119 KRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAR 178
Query: 172 AYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229
Y + + T VYGP P K + L I G Y Y
Sbjct: 179 EYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWKL-IDGSKEATPFYYYYV 237
Query: 230 DVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFN-D 287
DV + + E + N G + + DICK+ + P S E D
Sbjct: 238 DVRDVAAAHVFALENAKLSN-GRMLVSKGVFTTGDICKVLRKEFPNKSDVIAEPVDITVD 296
Query: 288 QRYF-LDDQKLTSLGW 302
+F LD+ SLG+
Sbjct: 297 PSFFKLDNSFSKSLGF 312
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
++ +TGA GF+ + +C RL+R K+ + Y P + V+GDI
Sbjct: 46 HVFVTGAGGFLGTAIC-RLLR-LANIKVTGFARGHY--------PELSQMGVNMVQGDIT 95
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
L+ + S D + H AA+ V +G+ ++ K N+ G +++AC+ I R
Sbjct: 96 DFALLKETM--HSCDLVFHVAAKAGV---WGSKDDYFKPNVQGAKNIIQACQELA-ITRL 149
Query: 128 IHVSTDEV-YGETDEDAVVGNHE-ASQLLPTNPYSATKAGAEMLVM 171
++ ST V + DE + + A L N Y +KA AE LV+
Sbjct: 150 VYTSTPSVTFAGVDEAGIDESQPYADNFL--NFYGESKALAEQLVL 193
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 64/224 (28%), Positives = 96/224 (42%)
Query: 58 NFKFVKGDIA-SADLVNFLLITESIDT-IMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
N K GD+ S LV +I E T I + AQ+HV SF + E+T + + GT L
Sbjct: 57 NMKLHYGDLTDSTCLVK--IINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRL 113
Query: 115 LEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
L+A K G I RF ST E+YG+ E E + P +PY A K A +V+
Sbjct: 114 LDAVKTCGLIGSVRFYQASTSELYGKVQETP---QKETTPFYPRSPYGAAKLYAYWIVVN 170
Query: 173 YGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYC 228
+ +Y L + N P + F + I + + G L G+ R + +
Sbjct: 171 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 230
Query: 229 EDVAEAFECILHKGE-------VGHVYNVGTKKERRVIDVAKDI 265
+D EA +L E G V++V E+ + + K I
Sbjct: 231 KDYVEAMWLMLQSDEPEDFVIATGEVHSVREFVEKSFLHIGKTI 274
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 121 (47.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 43/166 (25%), Positives = 70/166 (42%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ + L++ +I VLDK + + ++GDI
Sbjct: 7 LVTGAGGFLGQRIVQLLMQEKDLEEIRVLDKFFRPETREQFFNLDTNIKVTVLEGDILDT 66
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIH 129
+ + I ++H AA V N+ GT LLEAC + + FI
Sbjct: 67 QYLR--KACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 130 VSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVMA 172
S+ +V G ++ GN E + + ++PY +K AE V+A
Sbjct: 123 SSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLA 168
Score = 51 (23.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 300 LGWSERTIWEEGLRKTIEW 318
LG+ WEE +KT EW
Sbjct: 338 LGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 127 (49.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 64/261 (24%), Positives = 101/261 (38%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D + +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L ++HFA V S ++ + N+ GT LLE K
Sbjct: 61 EFEEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-------A 172
G ++ + S+ VYG + H TNPY +K E ++ A
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDLCQADKA 177
Query: 173 YGR---SYGLPVITTRGNNVYG--PNQFPEKLIPKFILLAM-RGLPLPIHG------DGS 220
+ Y P I + G P P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNP-IGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 221 NVRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRK 257
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 128 (50.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TG GF+ H+ L+ P + + + L S L+ L ++GD+ A
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEEL--KTGPVQVTAIQGDVTQA 70
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKVTGQIRRF 127
V + + ++H A V FG + T K N+ GT +++AC TG R
Sbjct: 71 HEVAAAMAGSHV--VIHTAGLVDV---FGKASPETIHKVNVQGTQNVIDACVQTGT-RLL 124
Query: 128 IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSYGL 179
++ S+ EV G + GN + + + +PY +KA AE LV+ A GR GL
Sbjct: 125 VYTSSMEVVGPNVKGHPFYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRK-GL 179
Score = 41 (19.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 301 GWSERTIWEEGLRKTIEW 318
G+ WEE +TI W
Sbjct: 312 GYKPLFSWEESRARTIHW 329
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 128 (50.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TG GF+ H+ L+ P + + + L S L+ L ++GD+ A
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEEL--KTGPVQVTAIQGDVTQA 70
Query: 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKVTGQIRRF 127
V + + ++H A V FG + T K N+ GT +++AC TG R
Sbjct: 71 HEVAAAMAGSHV--VIHTAGLVDV---FGKASPETIHKVNVQGTQNVIDACVQTGT-RLL 124
Query: 128 IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSYGL 179
++ S+ EV G + GN + + + +PY +KA AE LV+ A GR GL
Sbjct: 125 VYTSSMEVVGPNVKGHPFYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRK-GL 179
Score = 41 (19.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 301 GWSERTIWEEGLRKTIEW 318
G+ WEE +TI W
Sbjct: 312 GYKPLFSWEESRARTIHW 329
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 63/261 (24%), Positives = 101/261 (38%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y +V+D +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-------A 172
G ++ + S+ VYG + H TNPY +K E ++ A
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDLCQADKA 177
Query: 173 YGR---SYGLPVITTRGNNVYG--PNQFPEKLIPKFILLAM-RGLPLPIHG------DGS 220
+ Y P I + G P P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNP-IGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGT 236
Query: 221 NVRSYLYCEDVAEAFECILHK 241
VR Y++ D+A+ L K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRK 257
>ZFIN|ZDB-GENE-030131-5673 [details] [associations]
symbol:hsd3b7 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase" species:7955
"Danio rerio" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-030131-5673 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0016853 EMBL:BC045457 IPI:IPI00489625
RefSeq:NP_956103.1 UniGene:Dr.32972 ProteinModelPortal:Q7ZVQ1
STRING:Q7ZVQ1 GeneID:327462 KEGG:dre:327462 InParanoid:Q7ZVQ1
NextBio:20810040 ArrayExpress:Q7ZVQ1 Uniprot:Q7ZVQ1
Length = 368
Score = 126 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 56/211 (26%), Positives = 91/211 (43%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
+ITG GF+ H+ L+ K + L D KN+ PS S + + VK I
Sbjct: 12 VITGGCGFLGQHLLRVLLEKKKNVKEIRL--FD-----KNVFPSLQSESTEDVKVVIIQG 64
Query: 70 DLVNFLLITESI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
D+ + + + D + H A+ V F N + GT ++AC G I+
Sbjct: 65 DITKYEDVRNAFLGADLVFHAASLVDVWYKIPEKVIFAVN-VQGTENAIKACVEIG-IQY 122
Query: 127 FIHVSTDEVYGET--DEDAVVGNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY-GLPV 181
++ S+ EV G ++ V GN + + PY +KA AE +V+ A G G +
Sbjct: 123 LVYTSSMEVVGPNVKGDEFVRGNEDTPYNIFHEMPYPKSKAAAEKIVLEANGTKVEGGNI 182
Query: 182 ITT---RGNNVYGPNQFPEKLIPKFILLAMR 209
+ T R +YG +L+ F L ++R
Sbjct: 183 LYTCCLRPTGIYGEQH---QLMKDFYLNSVR 210
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 100 (40.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/127 (22%), Positives = 55/127 (43%)
Query: 205 LLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV---------YNVGTKKE 255
+L ++ + I G G+ R +LY +D+A A I+ + H+ N+G +K
Sbjct: 221 ILGVKENSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKN 280
Query: 256 RRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKT 315
+ ++A + + + E ++ ++P K+ + W T E+G+R T
Sbjct: 281 YSIKELAYLLKTVIQFEGE--FRYNLSKPDGTYEKLTCCDKIKQMNWQAYTKLEDGIRST 338
Query: 316 IEWYTQN 322
WY N
Sbjct: 339 FHWYKSN 345
Score = 70 (29.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/132 (21%), Positives = 51/132 (38%)
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D+ V F E D + AA+ +D EF +N+ + ++ +
Sbjct: 41 DLTDQSAVKFFFEKEKPDFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINN- 99
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT--NPYSATKAGAEMLVMAYGRSYGLPV 181
+++ + +S+ VY E + S L PY+ K + AY YG+
Sbjct: 100 VKKLLFISSTSVYPEHASLPIKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNF 159
Query: 182 ITTRGNNVYGPN 193
I+ +YGPN
Sbjct: 160 ISVCPTTLYGPN 171
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 84 IMHFAAQTHVDNSFGN---SFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST----DEVY 136
++H AA+ V F N EF + NI +L CK ++ +ST D+
Sbjct: 65 VIHLAAR--VGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPDKTT 122
Query: 137 GETDEDAVVGNHEASQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ- 194
DE + H P+N Y+ K ++L AY YG + N+YGP+
Sbjct: 123 YPIDETMI---HNGPPH-PSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDN 178
Query: 195 ---FPEKLIPKFI---LLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH- 246
+IP I LAM+ L I G G +R ++Y D+A+ F L+ E
Sbjct: 179 YHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSP 238
Query: 247 -VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSER 305
+ +VG + E + DVA+ I + +M+ + + F ++ + + KL SL
Sbjct: 239 LILSVGEEDEISIADVARLITE--AMEFKGKLIFDTSKADGQYKKTASNLKLKSLVPDLT 296
Query: 306 -TIWEEGLRKTIEWYTQN 322
T ++ ++++ +W+ N
Sbjct: 297 FTPIQQAIKESCQWFIDN 314
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 3 TYTPKNILITGAAGFIASHV 22
T + + +L+TG +G + +
Sbjct: 4 TTSKRTVLVTGGSGLVGKGI 23
>UNIPROTKB|Q32L94 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9913 "Bos taurus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BT021824
EMBL:BC109694 IPI:IPI00689930 RefSeq:NP_001073761.1
UniGene:Bt.35781 ProteinModelPortal:Q32L94 GeneID:532489
KEGG:bta:532489 CTD:93517 HOGENOM:HOG000168007 InParanoid:Q32L94
OrthoDB:EOG40ZQZ0 NextBio:20875710 Uniprot:Q32L94
Length = 393
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 62/258 (24%), Positives = 117/258 (45%)
Query: 5 TPKN-ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+PK +LITG G+ + L N +++ D S+ IP +F+
Sbjct: 6 SPKETVLITGGGGYFGFRLGCAL--NLLGVHVILFD----ISHPAQTIPE----GIRFIL 55
Query: 64 GDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GDI +D+ N + + + H A+ N + N+ GT +L+AC+ G
Sbjct: 56 GDIRCLSDIENAFQGVD-VACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQACRRRG 114
Query: 123 QIRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRS 176
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G +
Sbjct: 115 -VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSANGTA 170
Query: 177 Y--GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
G V++T R +YGP + ++ +P+ + +GL ++GD ++ +++ +++
Sbjct: 171 LERGGGVLSTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNL 228
Query: 232 AEAFECILH--KGEVGHV 247
+A K GH+
Sbjct: 229 VQAHILASEALKANKGHI 246
>FB|FBgn0036698 [details] [associations]
symbol:CG7724 species:7227 "Drosophila melanogaster"
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=ISS] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 KO:K00070 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:AY069197 RefSeq:NP_648957.1
UniGene:Dm.7711 SMR:Q9VVE3 IntAct:Q9VVE3 MINT:MINT-971239
EnsemblMetazoa:FBtr0075284 GeneID:39918 KEGG:dme:Dmel_CG7724
UCSC:CG7724-RA FlyBase:FBgn0036698 InParanoid:Q9VVE3
OrthoDB:EOG4Z34W5 GenomeRNAi:39918 NextBio:816080 Uniprot:Q9VVE3
Length = 398
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG +GF+ H+ +L+ E I + LD KN I + +S + DI
Sbjct: 9 LLVTGGSGFLGQHLIKQLLERKEELGIKEIRSLDIVP-YKNNIGHEETSLLRTYVADIGG 67
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
DL I +D + H AA ++ N E + N+ GT +++ C + ++R +
Sbjct: 68 -DLKALSPIFNGVDGVFHCAASVKIEYP-PNYEELERVNVNGTLAVVDLC-IQNNVKRLV 124
Query: 129 HVSTDEVY-----GETDEDAVVGNHEASQLLPTNPYSAT-KAGAEMLVMAYGRS 176
+ S V G + AV+ + E+ PT S + + L+ Y S
Sbjct: 125 YTSCTSVCFVPFKGRSTFSAVINSTESKTDTPTLDSSTLWEQDNQFLIPGYASS 178
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 61/250 (24%), Positives = 111/250 (44%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSN--LKNLIPS----KASSNF 59
K LITG G S++ LI + Y Y ++ K+ + N +KN+ K +
Sbjct: 6 KVALITGITGQDGSYLTEFLISKGY--YVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESL 63
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEAC 118
GD+ A ++ ++ + I + AQ+HV SF S E+T + + G LL+A
Sbjct: 64 TLHYGDLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMS-EYTGDVDGLGCLRLLDAI 122
Query: 119 KVTGQIRR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
+ G ++ + ST E+YG+ E + E + P +PY+ K A +V+ Y +
Sbjct: 123 RSCGMEKKVKYYQASTSELYGKVQE---IPQSETTPFYPRSPYAVAKQYAYWIVVNYREA 179
Query: 177 YGL----PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDV 231
Y + ++ + GP F + I +F+ G ++ G+ + R + + D
Sbjct: 180 YDMYACNGILFNHESPRRGPT-FVTRKITRFVAGIACGRDEILYLGNINAKRDWGHARDY 238
Query: 232 AEAFECILHK 241
EA +L +
Sbjct: 239 VEAMWLMLQQ 248
>UNIPROTKB|Q60BD7 [details] [associations]
symbol:MCA0540 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE017282
GenomeReviews:AE017282_GR RefSeq:YP_113059.1
ProteinModelPortal:Q60BD7 GeneID:3103317 KEGG:mca:MCA0540
PATRIC:22604840 HOGENOM:HOG000240103 OMA:FMSESRR Uniprot:Q60BD7
Length = 313
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 45/172 (26%), Positives = 71/172 (41%)
Query: 113 VLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
V EA V + ++VST VYG+ D V E P S + AE +MA
Sbjct: 87 VFFEALPVRCLPGKVVYVSTSGVYGDCGGDWV---DEERPPRPQTARSRRRLAAEEALMA 143
Query: 173 YGRSYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
+ R YG+ V+ R +YGP + P E+L G+P+ + + S + ++ +D+
Sbjct: 144 WSRRYGVTVVILRVPGIYGPGRLPLERLCA--------GVPV-VRQEESPYSNRIHADDL 194
Query: 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR 283
AE + VYNV + D + F + +I E R
Sbjct: 195 AEVCVAAGTRAAAEGVYNVSDGHPTTLTDYFHAVADHFGLPRPPAISLAEAR 246
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 43/171 (25%), Positives = 68/171 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE K
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
G ++ + S+ VYG + H TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMI 168
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 43/171 (25%), Positives = 68/171 (39%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE K
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
G ++ + S+ VYG + H TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMI 168
>UNIPROTKB|G3X7Y2 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9913 "Bos taurus" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:DAAA02046125 EMBL:DAAA02046126
Ensembl:ENSBTAT00000048714 Uniprot:G3X7Y2
Length = 393
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 62/258 (24%), Positives = 116/258 (44%)
Query: 5 TPKN-ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+PK +LITG G+ + L N +++ D S IP +F+
Sbjct: 6 SPKETVLITGGGGYFGFRLGCAL--NLLGVHVILFD----ISRPAQTIPE----GIRFIL 55
Query: 64 GDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GDI +D+ N + + + H A+ N + N+ GT +L+AC+ G
Sbjct: 56 GDIRCLSDIENAFQGVD-VACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQACRRRG 114
Query: 123 QIRRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRS 176
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G +
Sbjct: 115 -VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSANGTA 170
Query: 177 Y--GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231
G V++T R +YGP + ++ +P+ + +GL ++GD ++ +++ +++
Sbjct: 171 LERGGGVLSTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNL 228
Query: 232 AEAFECILH--KGEVGHV 247
+A K GH+
Sbjct: 229 VQAHILASEALKANKGHI 246
WARNING: HSPs involving 16 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 668 656 0.00096 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 266
No. of states in DFA: 624 (66 KB)
Total size of DFA: 375 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.98u 0.09s 56.07t Elapsed: 00:00:02
Total cpu time: 56.04u 0.09s 56.13t Elapsed: 00:00:02
Start: Fri May 10 22:36:38 2013 End: Fri May 10 22:36:40 2013
WARNINGS ISSUED: 2