Your job contains 1 sequence.
>005954
MLAGCSSSTLLSPRHRLRSEASAQFPACHFQLPSMGTQRLDLPCSFSRKDSSRSQPIRPV
GLSVEKPIEPKTSACSLKQNVRLPPLATSTQREIKDEFWEKGKSLKRFAEGGLVDESCIN
RAKRKKGSSGDNDGKNDDIHEGGGDSLSLGQLGTGNFWFQPSFTGQNVPQVPFTLTCSGE
KDRVCYVPGEFISPPLPLSNNPWVESVITEITDLGEKDGDETSHRLAKEVSASSTSSESG
SLALRLHENPVEHDVGNGSRNPYPHQGGVEASEEGTNQGENGFELVRLLTDCVEAIGSRN
IPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDS
GAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPN
PPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESV
AVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYY
SALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFR
CMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAPVDVAGGS
SSFSQPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005954
(667 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 1626 1.8e-194 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 617 3.1e-60 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 612 1.0e-59 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 609 2.2e-59 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 597 4.0e-58 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 590 2.2e-57 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 522 4.8e-56 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 568 4.8e-55 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 507 5.4e-51 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 527 1.1e-50 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 478 1.6e-45 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 476 2.7e-45 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 474 4.4e-45 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 452 9.3e-43 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 442 1.1e-41 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 430 6.5e-40 2
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 296 2.3e-39 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 434 1.6e-38 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 428 5.2e-38 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 412 8.0e-37 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 398 1.3e-36 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 373 8.0e-34 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 358 8.4e-30 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 330 7.5e-27 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 288 2.7e-22 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 251 4.1e-22 2
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 286 6.6e-22 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 266 3.2e-19 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 248 5.0e-18 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 241 1.6e-17 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 241 3.5e-17 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 214 2.7e-14 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 122 4.3e-05 1
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 1626 (577.4 bits), Expect = 1.8e-194, Sum P(2) = 1.8e-194
Identities = 327/518 (63%), Positives = 387/518 (74%)
Query: 157 FWFQPSFTGQNV--PQVPFTLTCSGE-KDRVCYVPGEFISPPLPLSNNPWVESVITEITD 213
FWF+ FTGQ+ P +PF+LTCSG+ +++VC+VP E IS PLP N WV+SVITE+
Sbjct: 144 FWFE-HFTGQDSSSPALPFSLTCSGDDEEKVCFVPSEVISQPLP---N-WVDSVITELAG 198
Query: 214 LGEKDGDETSHRLAKEVXXXXXXXXXXXLALRLHENPVEHDVGNGSRNPYPHQGGVEASE 273
+G+KD + + KE H P + NGSRNPY H+G E
Sbjct: 199 IGDKDVESSLPAAVKEASGGSSTSASSESRSLSHRVP---EPTNGSRNPYSHRGATEERT 255
Query: 274 EGT-NQGEN------GFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRG-SPISRL 325
G N N FELV LLT C++AI SRNI A+NHFIA+ GD+ASPRG +P++RL
Sbjct: 256 TGNINNNNNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRL 315
Query: 326 TAYYTEALALRVSRLWPHTFHITPPRDFDR-VDDDSGAALRLLNQATPIPKFIHFTANEM 384
AYY EALALRV+R+WPH FHI PPR+FDR V+D+SG ALR LNQ TPIPKFIHFTANEM
Sbjct: 316 IAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEM 375
Query: 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRL 444
LLRAF+GK+RVHIIDFDIKQGLQWPSFFQSLASR NPP HVRITGIGESK ELNETGDRL
Sbjct: 376 LLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRL 435
Query: 445 SGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFL 504
GFAEA+NL FEFHPVVDRLEDVRLWMLHVKE ESVAVNC+ Q+HKTLY G G +RDFL
Sbjct: 436 HGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFL 495
Query: 505 GLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEM 564
GLIRSTNP +++AEQEAEHNS LETRV NSL+YYSA+FD I +L DS +R+K+EEM
Sbjct: 496 GLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEM 555
Query: 565 -FAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGN 623
F RE+R+IVACEGS R ERH F +WRRM+EQ GFR +G+SERE+LQS+MLL+MY N
Sbjct: 556 LFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDN 615
Query: 624 YG---VKKQGQD-------GAALTLSWIDQPLYTVSAW 651
G V++ +D G +TL W +QPLYT+SAW
Sbjct: 616 EGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 280 (103.6 bits), Expect = 1.8e-194, Sum P(2) = 1.8e-194
Identities = 78/142 (54%), Positives = 92/142 (64%)
Query: 1 MLAGCSSSTLLSPRHRLRSEASAQFPA---CHFQLPSMGTQRLDLPCS--FSRKDSSRSQ 55
MLAGCSSS+LLSP RLRSEA A A HF P M TQRLDLPCS FSRK++ S+
Sbjct: 1 MLAGCSSSSLLSPTRRLRSEAVAATSATVSAHF--P-MNTQRLDLPCSSSFSRKETPSSR 57
Query: 56 PI-RPVGL-----SVEKPIE--PKTSACSLKQNVRLPPLATSTQREIKDEFWE-----KG 102
P+ R + L + KPIE KTS CSLKQN++LPPLAT T+ + W +G
Sbjct: 58 PLGRSISLDNSNNNNNKPIERKTKTSGCSLKQNIKLPPLAT-TRGNGEGFSWNNDNNNRG 116
Query: 103 KSLKRFAEGGLVDESCINRAKR 124
KSLKR AE DESC++RAKR
Sbjct: 117 KSLKRLAEE---DESCLSRAKR 135
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 141/380 (37%), Positives = 205/380 (53%)
Query: 280 ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
ENG LV L C EA+ N+ + ++G +A + + ++ Y+ EALA R+ R
Sbjct: 164 ENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIYR 223
Query: 340 LWPHTFHITPPRDFDRVDDDSGAALRL-LNQATPIPKFIHFTANEMLLRAFDGKDRVHII 398
L P +P +D L++ + P KF HFTAN+ +L AF GK RVH+I
Sbjct: 224 LSPSQ---SP------IDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVI 274
Query: 399 DFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQE----LNETGDRLSGFAEALNLP 454
DF + QGLQWP+ Q+LA RP P R+TGIG + L+E G +L+ AEA+++
Sbjct: 275 DFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVE 334
Query: 455 FEFHP-VVDRLEDVRLWMLHVK--EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTN 511
FE+ V + L D+ ML ++ E ESVAVN +F+LHK L G G + LG++
Sbjct: 335 FEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLL--GRPGAIDKVLGVVNQIK 392
Query: 512 PTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRS 571
P I + EQE+ HNSP R + SL YYS LFD ++ +P ++ E +++ +
Sbjct: 393 PEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLE-GVPSGQD-KVMSEVYLGKQICN 450
Query: 572 IVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQ 631
+VAC+G DR+ERHE+ WR GF I Q+ MLL +++ G G + +
Sbjct: 451 VVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFN-GGEGYRVEES 509
Query: 632 DGAALTLSWIDQPLYTVSAW 651
DG L L W +PL SAW
Sbjct: 510 DGC-LMLGWHTRPLIATSAW 528
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 136/378 (35%), Positives = 209/378 (55%)
Query: 278 QGENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRV 337
Q E G L+ LL C EA+ + N+ N + ++ +++P G+ R+ AY++EA++ R+
Sbjct: 283 QDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARL 342
Query: 338 SRLWPHTFHITPPRDFDRVDD-DSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVH 396
+ P R + +A ++ N +P+ KF HFTAN+ + AF+ +D VH
Sbjct: 343 LNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVH 402
Query: 397 IIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFE 456
IID DI QGLQWP F LASRP P HVR+TG+G S + L TG RLS FA+ L LPFE
Sbjct: 403 IIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFE 462
Query: 457 FHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVL 516
F P+ +++ ++ L+V+++E+VAV+ L +LY G L L++ P +V
Sbjct: 463 FCPLAEKVGNLDTERLNVRKREAVAVHW---LQHSLYDVTGSDAHT-LWLLQRLAPKVVT 518
Query: 517 MAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEE-MFAREVRSIVAC 575
+ EQ+ H FL R ++ YYSALFD + S +S R +E+ + ++E+R+++A
Sbjct: 519 VVEQDLSHAGSFLG-RFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAV 577
Query: 576 EGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAA 635
G R FE+WR M+Q GF+ + ++ Q+ +LL M+ Y + D
Sbjct: 578 GGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLV---DDNGT 633
Query: 636 LTLSWIDQPLYTVSAWAP 653
L L W D L T SAW P
Sbjct: 634 LKLGWKDLSLLTASAWTP 651
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 137/380 (36%), Positives = 210/380 (55%)
Query: 280 ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
ENG LV L C EAI N+ + ++G +A + + ++ Y+ EALA R+ R
Sbjct: 216 ENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYR 275
Query: 340 LWPHTFHITPPRDFDRVDDDSGAALRL-LNQATPIPKFIHFTANEMLLRAFDGKDRVHII 398
L +PP++ ++D L++ + P KF HFTAN+ +L AF+GK RVH+I
Sbjct: 276 L-------SPPQN--QIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVI 326
Query: 399 DFDIKQGLQWPSFFQSLASRPNPPSHVRITGIG----ESKQELNETGDRLSGFAEALNLP 454
DF + QGLQWP+ Q+LA R P R+TGIG ++ L+E G +L+ AEA+++
Sbjct: 327 DFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVE 386
Query: 455 FEFHP-VVDRLEDVRLWMLHVK--EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTN 511
FE+ V + L D+ ML ++ + E+VAVN +F+LHK L G G + LG+++
Sbjct: 387 FEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLL--GRPGGIEKVLGVVKQIK 444
Query: 512 PTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRS 571
P I + EQE+ HN P R + SL YYS LFD ++ +P +S ++ E +++ +
Sbjct: 445 PVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE-GVP-NSQDKVMSEVYLGKQICN 502
Query: 572 IVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQ 631
+VACEG DR+ERHE+ W G + Q+ MLL +++ G G + +
Sbjct: 503 LVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQ-GYRVEES 561
Query: 632 DGAALTLSWIDQPLYTVSAW 651
+G L L W +PL T SAW
Sbjct: 562 NGC-LMLGWHTRPLITTSAW 580
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 135/374 (36%), Positives = 200/374 (53%)
Query: 280 ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
E G LV L C EA+ N+ + + +G +AS + + ++ Y+ E LA R+ R
Sbjct: 147 ETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYR 206
Query: 340 LWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIID 399
++P RD + S ++ P KF HFTAN+ +L F ++VH+ID
Sbjct: 207 IYP--------RDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVID 258
Query: 400 FDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHP 459
+ GLQWP+ Q+LA RPN P R+TGIG S ++ E G +L A + + FEF
Sbjct: 259 LGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKS 318
Query: 460 V-VDRLEDVRLWMLHVKEK-ESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLM 517
+ ++ L D++ ML ++ ESVAVN +F+LH+ L + G + FL I+S P I+ +
Sbjct: 319 IALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLL--AHPGSIDKFLSTIKSIRPDIMTV 376
Query: 518 AEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEG 577
EQEA HN R + SL YYS+LFD ++ P S R+ E R++ ++VACEG
Sbjct: 377 VEQEANHNGTVFLDRFTESLHYYSSLFDSLE-GPP--SQDRVMSELFLGRQILNLVACEG 433
Query: 578 SDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALT 637
DR+ERHE+ WR GGF+ + I Q+ MLL +Y+ G G + +G L
Sbjct: 434 EDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYA-GADGYNVEENEGCLL- 491
Query: 638 LSWIDQPLYTVSAW 651
L W +PL SAW
Sbjct: 492 LGWQTRPLIATSAW 505
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 149/470 (31%), Positives = 232/470 (49%)
Query: 195 PLPLSNNPWVESVITEITDLGEKDGDETSHRLAKEVXXXXXXXXXXXLALRLHENPVEHD 254
P LSN WVES+++E+ + D D T R + A E + +
Sbjct: 91 PSDLSN--WVESMLSELNNPASSDLDTT--RSCVDRSEYDLRAIPGLSAFPKEEEVFDEE 146
Query: 255 VGNGSRNPYPHQGGVEASEEGT------NQGENGFELVRLLTDCVEAIGSRNIPAVNHFI 308
S E+S+E T + E G LV L C EAI N+ + +
Sbjct: 147 A---SSKRIRLGSWCESSDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALV 203
Query: 309 AKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRL-L 367
++G +A + + ++ Y+ +ALA R+ R + + V+ L +
Sbjct: 204 KRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAA-----VNPSFEEVLEMHF 258
Query: 368 NQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRI 427
++ P KF HFTAN+ +L A RVH+ID + QG+QWP+ Q+LA RP P R+
Sbjct: 259 YESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRL 318
Query: 428 TGIG----ESKQELNETGDRLSGFAEALNLPFEFHPVV-DRLEDVRLWMLHVK-EKESVA 481
TGIG E+ L + G +L+ FA+ + + FEF + + L D+ M + E E++
Sbjct: 319 TGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLV 378
Query: 482 VNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYS 541
VN +F+LH+ L G + L +++ P+IV + EQEA HN R + +L YYS
Sbjct: 379 VNSVFELHRLL--ARSGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYS 436
Query: 542 ALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRC 601
+LFD ++ S L S R+ E R++ ++VA EGSDR+ERHE+ WR M+ GF
Sbjct: 437 SLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDP 496
Query: 602 MGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
+ + Q+ MLL +Y+ G+ G + + DG L + W +PL T SAW
Sbjct: 497 IHLGSSAFKQASMLLSLYATGD-GYRVEENDGC-LMIGWQTRPLITTSAW 544
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 522 (188.8 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 118/300 (39%), Positives = 179/300 (59%)
Query: 367 LNQATPIPKFIHFTANEMLLRAFDGKDR--VHIIDFDIKQGLQWPSFFQSLASR---PN- 420
LNQ TP +F H TAN+ +L A + D +HI+D DI QGLQWP Q+LA R P+
Sbjct: 149 LNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSS 208
Query: 421 PPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLED-------VRLWMLH 473
PP +RITG G LN TGDRL+ FA++L L F+FH +V ED +RL L
Sbjct: 209 PPPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALS 268
Query: 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRV 533
+ E++AVNC+ LHK +++ +G ++ FL I+S N IV MAE+EA H R
Sbjct: 269 AVQGETIAVNCVHFLHK-IFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRF 327
Query: 534 SNSLRYYSALFDLIDYSLPLDSPVRIKIEEM-FAREVRSIVACEGSDRLERHESFENWRR 592
S ++ +Y A+FD ++ +LP +S R+ +E+ F +E+ +VA E ++R +RH FE W
Sbjct: 328 SEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEE 387
Query: 593 MMEQGGFRCMGISEREMLQSQMLLKM-YSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
MM++ GF + I + Q+++LL++ Y Y ++ +L L W ++PL++VS+W
Sbjct: 388 MMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNN---SLFLGWQNRPLFSVSSW 444
Score = 73 (30.8 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 285 LVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
L RLL + N A + ++ L +SP G RL +T+AL++R++R
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRINR 95
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 127/377 (33%), Positives = 205/377 (54%)
Query: 280 ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
E G LV+ L C EA+ N+ + + ++G +A+ + + ++ Y+ EALA R+ R
Sbjct: 152 ETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYR 211
Query: 340 LWPHTFHITPPRDFDRVDDDSGAALRL-LNQATPIPKFIHFTANEMLLRAFDGKDRVHII 398
+ P I P F+ + L++ + P KF HFTAN+ +L A VH+I
Sbjct: 212 IHPSAAAIDP--SFEEI-------LQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVI 262
Query: 399 DFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGE-SKQE-LNETGDRLSGFAEALNLPFE 456
D + QG+QWP+ Q+LA RP P R+TG+G S +E + E G +L+ A+A+ + F+
Sbjct: 263 DLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFK 322
Query: 457 FHPVV-DRLEDVRLWMLHVK-EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTI 514
F+ + +RL D+ M + E E++ VN +F+LH L G + L +++ P +
Sbjct: 323 FNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVL--SQPGSIEKLLATVKAVKPGL 380
Query: 515 VLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVA 574
V + EQEA HN R + +L YYS+LFD ++ + + S R+ E R++ ++VA
Sbjct: 381 VTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVA 440
Query: 575 CEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGA 634
EGSDR+ERHE+ WR+ M GF + + Q+ +LL + S G G + + DG+
Sbjct: 441 TEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLAL-SGGGDGYRVEENDGS 499
Query: 635 ALTLSWIDQPLYTVSAW 651
L L+W +PL SAW
Sbjct: 500 -LMLAWQTKPLIAASAW 515
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 507 (183.5 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 130/405 (32%), Positives = 217/405 (53%)
Query: 262 PYPHQGGVEASEEGTNQGENGFEL----VRLLTDCVEAIGSRNIPAVNHFIAKLGDVASP 317
P H+ + E + ++ F+L ++ + DC I + + + ++ + S
Sbjct: 190 PLTHESPTKEDPETNDSEDDDFDLEPPLLKAIYDCAR-ISDSDPNEASKTLLQIRESVSE 248
Query: 318 RGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFI 377
G P R+ Y+TEAL+ R+S P T + + D + + LN A P KF
Sbjct: 249 LGDPTERVAFYFTEALSNRLSPNSPATSSSSSSTE------DLILSYKTLNDACPYSKFA 302
Query: 378 HFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPN-PPSHVRITGI-----G 431
H TAN+ +L A + +++HI+DF I QG+QWP+ Q+LA+R + P+ +R++GI G
Sbjct: 303 HLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLG 362
Query: 432 ESKQ-ELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHK 490
ES + L TG+RL FA+ L+L F+F P++ + + V E +AVN + QL+K
Sbjct: 363 ESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYK 422
Query: 491 TLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYS 550
L ++ L L +S NP +V + E E N RV N+L++YSA+F+ ++ +
Sbjct: 423 LL-DETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPN 481
Query: 551 LPLDSPVRIKIE-EMFAREVRSIVACE--GSDRLERHESFENWRRMMEQGGFRCMGISER 607
L DS R+++E E+F R + ++ E G R ER E E WR +ME GF + +S
Sbjct: 482 LGRDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNY 540
Query: 608 EMLQSQMLLKMYSCGN-YGVKKQGQDGAALTLSWIDQPLYTVSAW 651
+ Q+++LL Y+ N Y + + + G ++L+W D PL T+S+W
Sbjct: 541 AVSQAKILLWNYNYSNLYSIV-ESKPGF-ISLAWNDLPLLTLSSW 583
Score = 40 (19.1 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 158 WFQPSFTG-QNVPQVPFTLTCSGEKDRVCYVPGEFISPPLPLSNNP 202
W + +G +V P T D V Y P F + P LS P
Sbjct: 116 WMETLISGGDSVADGPDCDTWHDNPDYVIYGPDPFDTYPSRLSVQP 161
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 139/410 (33%), Positives = 212/410 (51%)
Query: 251 VEHDVGNGSRNPYPHQGGVEASEEGT-NQGENGFELVRLLTDCVEAIGSRNIPAVNHFIA 309
++ D+ + S +P + +E EE N G +L+ LL C E + + ++ + ++
Sbjct: 6 IDRDLPS-SDDPSSAKRRIEFPEETLENDGAAAIKLLSLLLQCAEYVATDHLREASTLLS 64
Query: 310 KLGDVASPRGSPISRLTAYYTEALALRV-SRLWPHTFHITPPRDFDRVDDDS-GAALRLL 367
++ ++ SP GS R+ AY+ +AL RV S + V +AL+
Sbjct: 65 EISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTY 124
Query: 368 NQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRI 427
N +P+ KF HFTAN+ + +A DG+D VHIID D+ QGLQWP+ F LASRP +RI
Sbjct: 125 NSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRI 184
Query: 428 TGIGESKQELNETGDRLSGFAEALNLPFEFHPV---VDRLEDVRLWMLHVKEKESVAVNC 484
TG G S L TG RL+ FA +LNLPFEFHP+ + L D L ++ E+V V+
Sbjct: 185 TGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPS--QLATRQGEAVVVH- 241
Query: 485 IFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNS--PFLETRVSNSLRYYSA 542
+ H+ LY G L + L ++R P ++ + EQE ++ FL R +L YYSA
Sbjct: 242 -WMQHR-LYDVTGNNL-ETLEILRRLKPNLITVVEQELSYDDGGSFLG-RFVEALHYYSA 297
Query: 543 LFDLIDYSLPLDSPVRIKIEEM-FAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRC 601
LFD + L +S R +E++ E+R+IVA G R +R + W+ + + GFR
Sbjct: 298 LFDALGDGLGEESGERFTVEQIVLGTEIRNIVA-HGGGRRKRMK----WKEELSRVGFRP 352
Query: 602 MGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
+ + Q+ +LL M Y + ++ L L W D L T SAW
Sbjct: 353 VSLRGNPATQAGLLLGMLPWNGYTLV---EENGTLRLGWKDLSLLTASAW 399
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 158/518 (30%), Positives = 235/518 (45%)
Query: 157 FWFQPSFTGQ-NVPQVPFTLTC-----SGEKDRVCYVPGEFISPPLPLSNN--PWVESVI 208
F+ QPS Q ++ F C SG K C S S+N P ++
Sbjct: 87 FYHQPSSVKQMDLSVQTFDSYCTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANN 146
Query: 209 TEITDLGEKDGDETSHRLAKEVXXXXXXXXXXXLALR-LHENPVEHDVGNGSRNP--YPH 265
++ +E ++ L L+ L +E DV N N +
Sbjct: 147 NNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQ 206
Query: 266 QGGVEASE--EGTNQGENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPIS 323
Q GV +S G +L +L +C +A+ + ++ + I++L + S G P+
Sbjct: 207 QHGVVSSAMYRSMEMISRG-DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQ 265
Query: 324 RLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANE 383
RL AY E L R++ + R D + + +L +A P KF + +AN
Sbjct: 266 RLGAYMLEGLVARLASSGSSIYKAL--RCKDPTGPELLTYMHILYEACPYFKFGYESANG 323
Query: 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQE------L 437
+ A + VHIIDF I QG QW S ++L +RP P +VRITGI + + L
Sbjct: 324 AIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGL 383
Query: 438 NETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTL-YSGN 496
G RL AE +PFEFH +V + L V+ E++AVN LH S
Sbjct: 384 ELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVT 443
Query: 497 GGVLRD-FLGLIRSTNPTIVLMAEQEAEHNS-PFLETRVSNSLRYYSALFDLIDYSLPLD 554
RD L L++ +P +V + EQEA N+ PFL R ++ +Y A+F+ ID L D
Sbjct: 444 VENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLP-RFVETMNHYLAVFESIDVKLARD 502
Query: 555 SPVRIKIEE-MFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQ 613
RI +E+ AREV +++ACEG +R ERHE WR GF+ +S +
Sbjct: 503 HKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIK 562
Query: 614 MLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
LL+ YS Y ++++ DGA L L W +QPL T AW
Sbjct: 563 GLLESYS-EKYTLEER--DGA-LYLGWKNQPLITSCAW 596
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 123/372 (33%), Positives = 193/372 (51%)
Query: 289 LTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHIT 348
L C +A+ ++ + + KL + S G PI RL AY E L +++ +
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
Query: 349 PPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQW 408
R + + + + +L + P KF + +AN + A ++RVHIIDF I QG QW
Sbjct: 183 N-RCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQW 241
Query: 409 PSFFQSLASRPNPPSHVRITGIGESKQE------LNETGDRLSGFAEALNLPFEFHPVVD 462
+ Q+ A+RP P +RITGI + L+ G+RL+ A+ N+PFEF+ V
Sbjct: 242 VTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSV 301
Query: 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTL-YSGNGGVLRD-FLGLIRSTNPTIVLMAEQ 520
+ +V+ L V+ E++AVN F LH S + RD L +++S +P +V + EQ
Sbjct: 302 SVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQ 361
Query: 521 EAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEE-MFAREVRSIVACEGSD 579
E+ N+ R ++ YY+A+F+ ID +LP D RI +E+ AR+V +I+ACEG+D
Sbjct: 362 ESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGAD 421
Query: 580 RLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLS 639
R+ERHE WR GF +S + LL+ YS Y ++++ DGA L L
Sbjct: 422 RVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRLEER--DGA-LYLG 477
Query: 640 WIDQPLYTVSAW 651
W+ + L AW
Sbjct: 478 WMHRDLVASCAW 489
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 124/372 (33%), Positives = 196/372 (52%)
Query: 284 ELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPH 343
+L +L C +A+ N+ + +L + S G PI RL AY E L R++
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 344 TFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIK 403
+ R+ + + S + +L++ P KF + +AN + A ++R+HIIDF I
Sbjct: 109 IYKSLQSREPESYEFLS--YVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIG 166
Query: 404 QGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463
QG QW + Q+ A+RP ++RITG+G+ L RL A+ ++PF F+ V
Sbjct: 167 QGSQWIALIQAFAARPGGAPNIRITGVGDGSV-LVTVKKRLEKLAKKFDVPFRFNAVSRP 225
Query: 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTL-YSGNGGVLRD-FLGLIRSTNPTIVLMAEQE 521
+V + L V++ E++ VN + LH S + RD L +++S +P +V + EQE
Sbjct: 226 SCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQE 285
Query: 522 AEHN-SPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEE-MFAREVRSIVACEGSD 579
N SPFL R +L YY+A+F+ ID LP + RI IE+ AR+V +I+ACEG++
Sbjct: 286 CNTNTSPFLP-RFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAE 344
Query: 580 RLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLS 639
R+ERHE W+ GF +S + LL+ YS G Y ++++ DGA L L
Sbjct: 345 RIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNG-YAIEER--DGA-LYLG 400
Query: 640 WIDQPLYTVSAW 651
W+D+ L + AW
Sbjct: 401 WMDRILVSSCAW 412
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 128/404 (31%), Positives = 197/404 (48%)
Query: 265 HQGGV-EASEEGTNQGENGFELV------RLLTDCVEAIGSRNIPAVNHFIAKLGDVASP 317
HQ E+S +N + E+V ++L C A+ + + +L + S
Sbjct: 195 HQDSPKESSSADSNSHVSSKEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSI 254
Query: 318 RGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFI 377
+G P R+ AY E LA R++ + ++ D+ AA+++L + P KF
Sbjct: 255 QGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKE--PPSDERLAAMQVLFEVCPCFKFG 312
Query: 378 HFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIG--ESKQ 435
AN +L A G++ VHIIDFDI QG Q+ + +S+A P +R+TGI ES Q
Sbjct: 313 FLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQ 372
Query: 436 E----LNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKT 491
L G RL AE + F+F + + V L K E++ VN FQLH
Sbjct: 373 RSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHM 432
Query: 492 LYSGNGGV-LRD-FLGLIRSTNPTIVLMAEQEAEHN-SPFLETRVSNSLRYYSALFDLID 548
V RD L +++S NP +V + EQ+ N SPF R + YYSA+F+ +D
Sbjct: 433 PDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFP-RFIEAYEYYSAVFESLD 491
Query: 549 YSLPLDSPVRIKIE-EMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISER 607
+LP +S R+ +E + AR++ +IVACEG +R+ER+E+ WR M GF +S +
Sbjct: 492 MTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAK 551
Query: 608 EMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
Q L+K C Y +K++ + L W ++ L SAW
Sbjct: 552 VTNNIQNLIKQQYCNKYKLKEEMGE---LHFCWEEKSLIVASAW 592
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 117/357 (32%), Positives = 185/357 (51%)
Query: 308 IAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLL 367
+ ++ + S G PI R+ Y+ EAL+ H +P +D + + L
Sbjct: 195 LIRIKESVSESGDPIQRVGYYFAEALS--------HKETESPSSSSSSSLEDFILSYKTL 246
Query: 368 NQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPN-PPSHVR 426
N A P KF H TAN+ +L A + + +HI+DF I QG+QW + Q+LA+R + P+ +R
Sbjct: 247 NDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIR 306
Query: 427 ITGI-----GESK-QELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESV 480
I+GI G+S L TG+RL FA L+L FEF+PV+ ++ + V E +
Sbjct: 307 ISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVL 366
Query: 481 AVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYY 540
VN + +L+K L + L L RS NP IV + E E N RV NSLR+Y
Sbjct: 367 VVNFMLELYKLL-DETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFY 425
Query: 541 SALFDLIDYSLPLDSPVRIKIEE-MFAREVRSIVACEGSD-----RLERHESFENWRRMM 594
SA+F+ ++ +L DS R+++E +F R + +V + + R E E WR +M
Sbjct: 426 SAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLM 485
Query: 595 EQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
E+ GF + S + Q+++LL Y+ + + G ++L+W + PL TVS+W
Sbjct: 486 EKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGF-ISLAWNNVPLLTVSSW 541
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 430 (156.4 bits), Expect = 6.5e-40, Sum P(2) = 6.5e-40
Identities = 112/400 (28%), Positives = 193/400 (48%)
Query: 271 ASEEGTNQGENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYT 330
+S + N +L LLT C +A+ S + + ++ +S G RL Y+
Sbjct: 210 SSNKSKTHKTNTVDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFA 269
Query: 331 EALALRVS-RLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAF 389
EAL R++ + P + P VD A +L PI +F AN+ +
Sbjct: 270 EALEARITGNISPPVSNPFPSSTTSMVDILK--AYKLFVHTCPIYVTDYFAANKSIYELA 327
Query: 390 DGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGI-----G-ESKQELNETGDR 443
++HI+DF + G QWP ++L+ RP P +R+TGI G + ETG R
Sbjct: 328 MKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRR 387
Query: 444 LSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRD- 502
L F + N+PFEF+ + + E + L L + E+ VNCI H+ Y+ + V D
Sbjct: 388 LKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCI---HRLQYTPDETVSLDS 444
Query: 503 ----FLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVR 558
L L R NP + + AE +NSPF TR +L +YS+LFD+ D ++ + +
Sbjct: 445 PRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYK 504
Query: 559 IK--IE-EMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQML 615
+ +E E+ R+ S+++CEG++R R E+++ WR + + GF+ IS++ M +++ +
Sbjct: 505 NRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEI 564
Query: 616 LKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAPVD 655
++ ++ + D + W + +Y S W P +
Sbjct: 565 VRKRYHRDFVIDS---DNNWMLQGWKGRVIYAFSCWKPAE 601
Score = 41 (19.5 bits), Expect = 6.5e-40, Sum P(2) = 6.5e-40
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 247 HENPVEHDVGNGSRNPYP 264
H N E D+ N RN P
Sbjct: 144 HRNDEEDDLENNRRNKQP 161
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 296 (109.3 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 70/178 (39%), Positives = 93/178 (52%)
Query: 288 LLTDCVEAIGSRNIPAVNHFIA-KLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFH 346
LL C + + ++PA L ASPRG RL ++ ALALRV H H
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHG-H 111
Query: 347 ITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGL 406
+ R SGA L NQ P +F H TAN+ +L A DG RVHI+D D G+
Sbjct: 112 VVVGGGAAR-PASSGAYLAF-NQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGV 169
Query: 407 QWPSFFQSLASRPNP---PSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461
QWP Q++A R +P P VR+TG G + L TG+RL FA +++LPF F P++
Sbjct: 170 QWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLL 227
Score = 186 (70.5 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 59/185 (31%), Positives = 95/185 (51%)
Query: 478 ESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEA-------EHNSPFLE 530
E++AVNC+ LH +G+ L FL +++ +P +V +AE+EA +H L
Sbjct: 264 ETLAVNCVMFLHNL--AGHDE-LAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDD-LP 319
Query: 531 TRVSNSLRYYSALFDLIDYSLPLDSPVRIKIE-EMFAREVRSIVACEGSDRLERHESFEN 589
RV ++ +YSA+F+ ++ ++P S R+ +E E+ RE+ + V G R R E
Sbjct: 320 RRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGG-RWWR--GIER 376
Query: 590 WRRMMEQGGFRCMGISEREMLQSQMLLKM-YSCGNYGVKKQGQDGAALTLSWIDQPLYTV 648
W GF +S + Q+++LL++ Y Y V Q GA L W +PL +V
Sbjct: 377 WGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLV--QEARGACF-LGWQTRPLLSV 433
Query: 649 SAWAP 653
SAW P
Sbjct: 434 SAWQP 438
Score = 39 (18.8 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 3 AGCSSSTLLSPRHRLRSEASAQFPACHF 30
AG TLL +RLR+ A + HF
Sbjct: 196 AGADRDTLLRTGNRLRAFARSIHLPFHF 223
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 434 (157.8 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 125/426 (29%), Positives = 209/426 (49%)
Query: 246 LHEN-PVEH-DVGNGSRNPYPHQGGVEASEEGTNQGENGF-ELVRLLTDCVEAIGSRNIP 302
L++N P E V N +G S +N + +L LL C +A+ +
Sbjct: 351 LNQNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRR 410
Query: 303 AVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGA 362
N + ++ + +SP G+ RL Y+ +L R++ + + D
Sbjct: 411 TANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAAD--MLK 468
Query: 363 ALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLA-SRPNP 421
A + P K AN ++R + +HIIDF I G QWP+ L+ SRP
Sbjct: 469 AYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGG 528
Query: 422 PSHVRITGI-----GESKQE-LNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVK 475
+RITGI G E + ETG RL+ + + N+PFE++ + + E +++ L ++
Sbjct: 529 SPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLR 588
Query: 476 EKESVAVNCIFQLHKTLYSGNGGVL----RD-FLGLIRSTNPTIVLMAEQEAEHNSPFLE 530
+ E V VN +F+ L + VL RD L LIR NP + + A +N+PF
Sbjct: 589 QGEYVVVNSLFRFRNLL---DETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFV 645
Query: 531 TRVSNSLRYYSALFDLIDYSLPLDSPVRIKIE-EMFAREVRSIVACEGSDRLERHESFEN 589
TR +L +YSA+FD+ D L + +R+ E E + RE+ ++VACEG++R+ER E+++
Sbjct: 646 TRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQ 705
Query: 590 WRRMMEQGGFRCMGISEREMLQSQMLLKMYSC--GNYGVKKQGQDGAALTLSWIDQPLYT 647
W+ + + GFR + + E+E++Q+ + LK+ + N+ V Q+G L W + +Y
Sbjct: 706 WQARLIRAGFRQLPL-EKELMQN-LKLKIENGYDKNFDVD---QNGNWLLQGWKGRIVYA 760
Query: 648 VSAWAP 653
S W P
Sbjct: 761 SSLWVP 766
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 428 (155.7 bits), Expect = 5.2e-38, P = 5.2e-38
Identities = 117/384 (30%), Positives = 191/384 (49%)
Query: 288 LLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHI 347
LLT C +++ + + + + ++ SP G RL ++ AL +RL T +
Sbjct: 318 LLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALE---ARLEGSTGTM 374
Query: 348 TPPRDFDRVDDDSGAALRLLNQ------ATPIPKFIHFTANEMLLRAFDGKDRVHIIDFD 401
+D + A ++L A+P I+F +N+M+L A +HI+DF
Sbjct: 375 IQSY-YDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFG 433
Query: 402 IKQGLQWPSFFQSLASRPNPPSH-VRITGI-----G-ESKQELNETGDRLSGFAEALNLP 454
I G QWP F Q L S+ NP +RITGI G + + +TG RL+ + + +P
Sbjct: 434 ILYGFQWPMFIQHL-SKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVP 492
Query: 455 FEFHPVVDR-LEDVRLWMLHVKEKESVAVNCI--FQLHKTLYSGNGGVLRD-FLGLIRST 510
FE++ + + E +++ ++ E +AVN + F+ + + G RD FL LIR
Sbjct: 493 FEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDM 552
Query: 511 NPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIE-EMFAREV 569
NP + L + N+PF TR +L +YSALFDL +L ++P RI E E + REV
Sbjct: 553 NPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREV 612
Query: 570 RSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQ 629
+++ACEG DR+ER E+++ W+ M + GF+ + E E++Q KM G +
Sbjct: 613 MNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPV-EAELVQL-FREKMKKWGYHKDFVL 670
Query: 630 GQDGAALTLSWIDQPLYTVSAWAP 653
+D W + L++ S W P
Sbjct: 671 DEDSNWFLQGWKGRILFSSSCWVP 694
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 412 (150.1 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 119/413 (28%), Positives = 192/413 (46%)
Query: 252 EHDVGNGSRNPYPHQGGVEASEEGTNQGENGFELVRLLTDCVEAIGSRNIPAVNHFIAKL 311
++D G + H G ++ + + ++ LL C +A+ S + + ++
Sbjct: 177 KNDQGEATEKKTRHVKG-SSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEI 235
Query: 312 GDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQAT 371
+ +S G RL ++ EAL R++ T R VD A + QA
Sbjct: 236 REHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSSRT-SMVDILK--AYKGFVQAC 292
Query: 372 PIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGI- 430
P +FTAN + +HIIDF I G QWP Q+L+ R P +R+TGI
Sbjct: 293 PTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIE 352
Query: 431 ----G-ESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCI 485
G + + ETG RL F + N+PFE+ + E++ L L + E+ VNCI
Sbjct: 353 LPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCI 412
Query: 486 FQLHKT---LYSGNGGVLRDF-LGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYS 541
+L T S N RD L L R NP + + AE +NSPF TR +L + S
Sbjct: 413 LRLQYTPDETVSLNSP--RDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCS 470
Query: 542 ALFDLIDYSLPLDSPVRIKIE-EMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFR 600
+LFD+ + +L D R +E E+ R+ S++ACEGS+R R E+++ W+ + + GFR
Sbjct: 471 SLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFR 530
Query: 601 CMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAP 653
+S++ + + ++K ++ + D + W + LY VS W P
Sbjct: 531 PAKLSKQIVKDGKEIVKERYHKDFVIDN---DNHWMFQGWKGRVLYAVSCWKP 580
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 398 (145.2 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 125/424 (29%), Positives = 208/424 (49%)
Query: 250 PVEHD---VGNGSRNPYPHQGGVEASEEGTNQGENGFELVRLLTDCVEA-IGSRNIPAVN 305
P+ HD + N + GV E T++ + G LV LL +A G+ +
Sbjct: 67 PMLHDQEGLCNSASTGLSVADGVSFGEPKTDESK-GLRLVHLLVAAADASTGANKSRELT 125
Query: 306 HFI-AKLGDVASPRG-SPISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSG-- 361
I A+L D+ SP + + RL A++T L S+L + P + D V D +
Sbjct: 126 RVILARLKDLVSPGDRTNMERLAAHFTNGL----SKLLERDSVLCPQQHRDDVYDQADVI 181
Query: 362 AALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNP 421
+A LL +P F + TA + +L A + R+HI+D+DI +G+QW S Q+L SR
Sbjct: 182 SAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTG 241
Query: 422 PS--HVRITGIG------ESKQELNETGDRLSGFAEALNLPFEF-HPVVDRLEDVRLWML 472
PS H+RIT + +S + ETG RL+ FA+++ PF + H +D L
Sbjct: 242 PSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDT-NAFSTSSL 300
Query: 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAE--HNSPFLE 530
+ E+V +NC+ L + + V+ FL ++ NP +V + +E N FL
Sbjct: 301 KLVRGEAVVINCMLHLPRFSHQTPSSVI-SFLSEAKTLNPKLVTLVHEEVGLMGNQGFLY 359
Query: 531 TRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFARE-VRS-IVACEGSDRLERHESFE 588
R + L +SA+FD ++ L + +P R +E +F V + + +D ESF
Sbjct: 360 -RFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDA--EVESFA 416
Query: 589 NWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTV 648
+W + +E GF+ + +S Q+++LL +++ G + V++ GQ+G L L W + L +
Sbjct: 417 SWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDG-FRVEELGQNG--LVLGWKSRRLVSA 473
Query: 649 SAWA 652
S WA
Sbjct: 474 SFWA 477
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 373 (136.4 bits), Expect = 8.0e-34, P = 8.0e-34
Identities = 98/285 (34%), Positives = 146/285 (51%)
Query: 280 ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSR 339
E G L+ LL C + S ++ N + +L +ASP G + R+ AY+TEALA R+ +
Sbjct: 49 ERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILK 108
Query: 340 LWPHTF---HITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVH 396
WP + + T R + V ++ RL + PI K + N +L A +G+ VH
Sbjct: 109 SWPGLYKALNATQTRT-NNVSEEIHVR-RLFFEMFPILKVSYLLTNRAILEAMEGEKMVH 166
Query: 397 IIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFE 456
+ID D + QW + Q+ SRP P H+RITG+ K+ L + RL AE L++PF+
Sbjct: 167 VIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQ 226
Query: 457 FHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIV- 515
F+PVV RL+ + + L VK E++AV+ + QLH T + + ++R L NP+ V
Sbjct: 227 FNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLH-TFLASDDDLMRKNCALRFQNNPSGVD 285
Query: 516 LMAEQEAEHNSPF--LETRVSNSLRYYSALFDLIDYSLPLDSPVR 558
L H S E +SN+ YS D SLPL S R
Sbjct: 286 LQRVLMMSHGSAAEARENDMSNN-NGYSPSGDSAS-SLPLPSSGR 328
Score = 292 (107.8 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 60/157 (38%), Positives = 97/157 (61%)
Query: 496 NGGVLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDS 555
+ G FL I +P ++++ EQ+++HN L R+ SL Y+ALFD ++ +P S
Sbjct: 325 SSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTS 384
Query: 556 PVRIKIEEM-FAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQM 614
RIK+E+M F E+++I++CEG +R ERHE E W + ++ GF + +S MLQ++
Sbjct: 385 QDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARR 444
Query: 615 LLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
LL+ CG G + + + G A+ + W D+PLY+VSAW
Sbjct: 445 LLQ--GCGFDGYRIKEESGCAV-ICWQDRPLYSVSAW 478
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 358 (131.1 bits), Expect = 8.4e-30, P = 8.4e-30
Identities = 105/396 (26%), Positives = 183/396 (46%)
Query: 275 GTNQGENG----FELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYT 330
G G+NG +L LL C +A+ + + + ++ ++P G RL +
Sbjct: 330 GGGGGQNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFA 389
Query: 331 EALALRVSRLWPHTFH--ITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRA 388
L R++ + ++ PR V A +L P K +F N+ +
Sbjct: 390 NGLEARLAGTGSQIYKGIVSKPRSAAAVLK----AHQLFLACCPFRKLSYFITNKTIRDL 445
Query: 389 FDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGI-----G-ESKQELNETGD 442
RVH+IDF I G QWP+ + +P VRITGI G Q + ETG
Sbjct: 446 VGNSQRVHVIDFGILYGFQWPTLIHRFSMYGSPK--VRITGIEFPQPGFRPAQRVEETGQ 503
Query: 443 RLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGV--L 500
RL+ +A+ +PFE+ + + + ++L L + E VNC+++ + L+ + V
Sbjct: 504 RLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRA-ENLHDESVKVESC 562
Query: 501 RD-FLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRI 559
RD L LI NP + + +N+PF TR +L ++S++FD+++ +P + R+
Sbjct: 563 RDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERM 622
Query: 560 KIE-EMFAREVRSIVACEGSDRLERHESFENWR-RMMEQGGFRCMGISEREMLQSQMLLK 617
+E E+F RE +++ACEG +R+ER E+++ W R M G + + + L K
Sbjct: 623 FLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSG---LVQVPFDPSIMKTSLHK 679
Query: 618 MYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAP 653
+++ + QD L W + + +S W P
Sbjct: 680 VHTFYHKDFVID-QDNRWLLQGWKGRTVMALSVWKP 714
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 330 (121.2 bits), Expect = 7.5e-27, P = 7.5e-27
Identities = 117/428 (27%), Positives = 203/428 (47%)
Query: 254 DVGNGSRNPYPHQGGVEASEEGTNQGENGFELVRLLTDCVEAI--GSRNIPAV------- 304
D G+ S +P+ + A E+ +Q ++ + +L + E G N P +
Sbjct: 214 DPGHESHDPFLTPPKI-AGEDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILAR 272
Query: 305 -NHFIAKLGDVAS--PRGSPISRLTAYYTEAL--ALRVSRLWPHTFHITPPRDFD-RVDD 358
NH + D + P+ P R +Y TEAL L+ S L P + ++PP++ R+
Sbjct: 273 LNHNLNNNNDDTNNNPK-PPFHRAASYITEALHSLLQDSSLSPPS--LSPPQNLIFRI-- 327
Query: 359 DSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASR 418
AA R ++ +P +F++FTAN+ +L +F+G DR+HI+DFDI G QW S Q LA +
Sbjct: 328 ---AAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGK 384
Query: 419 PNPPSH---VRITGIGESKQ-----ELNETGDRLSGFAEALNLPFEFHPV-VDRLEDVRL 469
N S ++IT EL T + L FA + FE + ++ L +
Sbjct: 385 RNRSSSAPSLKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTY 444
Query: 470 WMLHV---KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHNS 526
W L + EKE++AVN + S G L L ++ +P +V+ +++ + N+
Sbjct: 445 WPLSLFRSSEKEAIAVNL------PISSMVSGYLPLILRFLKQISPNVVVCSDRSCDRNN 498
Query: 527 --PFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAR-EVRSIVACEGSDRLER 583
PF V N+L+YY++L + +D ++ IE + ++ ++ ++R
Sbjct: 499 DAPF-PNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLL----TNRYRW 553
Query: 584 HESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQ 643
E WR + Q GF + +S+ Q++ LL+ + ++K+ +L L W +
Sbjct: 554 MERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRK 613
Query: 644 PLYTVSAW 651
L TVSAW
Sbjct: 614 ELVTVSAW 621
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 288 (106.4 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 113/398 (28%), Positives = 185/398 (46%)
Query: 263 YPHQGGVEASEEGTNQGENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGD-VASPRGSP 321
Y H + N G G + L E I S A +A+L ++SP G P
Sbjct: 185 YGHHHHTPPPAKRLNPGPVG--ITEQLVKAAEVIESDTCLAQG-ILARLNQQLSSPVGKP 241
Query: 322 ISRLTAYYTEALALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTA 381
+ R Y+ EAL + + T + P ++ AA + ++ +P+ +F +FT+
Sbjct: 242 LERAAFYFKEALNNLLHNV-SQT--LNPYSLIFKI-----AAYKSFSEISPVLQFANFTS 293
Query: 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNP-PSHVRITGIGE----SKQE 436
N+ LL +F G R+HIIDFDI G QW S Q L R N P ++IT + E
Sbjct: 294 NQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLE 353
Query: 437 LNETGDRLSGFAEALNLPFEFHPV-VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSG 495
L T D L FA +N+ + + +D L + W + EKE+VAVN + +S
Sbjct: 354 LGFTQDNLKHFASEINISLDIQVLSLDLLGSIS-WP-NSSEKEAVAVN----ISAASFSH 407
Query: 496 NGGVLRDFLGLIRSTNPTIVLMAEQEAEHNS-PFLETRVSNSLRYYSALFDLIDYSLPLD 554
VLR ++ +PTI++ +++ E PF + ++++SL ++ALF+ +D ++ +
Sbjct: 408 LPLVLR----FVKHLSPTIIVCSDRGCERTDLPFSQ-QLAHSLHSHTALFESLD-AVNAN 461
Query: 555 SPVRIKIEEMFAR-EVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQ 613
KIE + E+ +V + S +ER W+ M Q GF + S Q++
Sbjct: 462 LDAMQKIERFLIQPEIEKLVL-DRSRPIER--PMMTWQAMFLQMGFSPVTHSNFTESQAE 518
Query: 614 MLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
L++ + V+K+ +L L W L VSAW
Sbjct: 519 CLVQRTPVRGFHVEKKHN---SLLLCWQRTELVGVSAW 553
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 251 (93.4 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 69/222 (31%), Positives = 106/222 (47%)
Query: 434 KQELNETGDRLSGFAEALNLPFEFHPVVD-RLEDVRLWMLHVKEKESVAVNCIFQLHKTL 492
++ L GD LS + L + F+ V RL D+ L E++AVN F+L++
Sbjct: 423 EERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVP 482
Query: 493 YSG--NGGVLRDFLGLIRSTNPTIVLMAEQEAEHNS-PFLETRVSNSLRYYSALFDLIDY 549
+ L ++ P +V + EQE N+ PFL RVS S Y AL + ++
Sbjct: 483 DESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLG-RVSESCACYGALLESVES 541
Query: 550 SLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREM 609
++P + R K+EE R++ + VACEG DR+ER E F WR M GF M +SE+ +
Sbjct: 542 TVPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEK-I 600
Query: 610 LQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
+S + VK +D + W+ + L SAW
Sbjct: 601 AESMKSRGNRVHPGFTVK---EDNGGVCFGWMGRALTVASAW 639
Score = 85 (35.0 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 365 RLLNQATPIPKFIHFTANEMLLRAFDGKDR----VHIIDFDIKQGLQWPSFFQSLASRPN 420
+LL + +P K AN +L A D D H+IDFDI +G Q+ + ++L++R N
Sbjct: 334 QLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRN 393
Query: 421 PPSH------VRITGIGES----------KQELNETGDRLSGFAEALNLPFEFHPV 460
S V+IT + + ++ L GD LS + L + F+ V
Sbjct: 394 GKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVV 449
Score = 37 (18.1 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 251 VEHDVGNGSRNPYPHQ-GGVEASEEGTNQGENGFELVRLLT------DC-VEAIGSRNIP 302
++ D+G G + Y + + G +Q +N +V++ C V+ G +
Sbjct: 371 IDFDIGEGGQ--YVNLLRTLSTRRNGKSQSQNS-PVVKITAVANNVYGCLVDDGGEERLK 427
Query: 303 AVNHFIAKLGD 313
AV +++LGD
Sbjct: 428 AVGDLLSQLGD 438
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 286 (105.7 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 112/404 (27%), Positives = 192/404 (47%)
Query: 279 GENGFELVRLLTDCVEAIGSRNIPAVNH------FIAKLG---DVASPRGSPISRLTAYY 329
G++ ++ L + E IG+ +H +A+L + +S SP R ++
Sbjct: 262 GDDQSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHI 321
Query: 330 TEAL-ALRVSRLWPHTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRA 388
EAL +L + P ITP R+ AA R ++ +P +F++FTAN+ +L +
Sbjct: 322 AEALLSLIHNESSPPL--ITPENLILRI-----AAYRSFSETSPFLQFVNFTANQSILES 374
Query: 389 FD--GKDRVHIIDFDIKQGLQWPSFFQSLAS-----RPNPPSHVRITGIG------ESKQ 435
+ G DR+HIIDFD+ G QW S Q LAS R N S +++T +
Sbjct: 375 CNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEF 434
Query: 436 ELNETGDRLSGFAEALNLPFEFHPV-VDRLEDVRLWMLHVK--EKESVAVNCIFQLHKTL 492
EL T + L FA + +PFE + V+ L + W L ++ EKE++AVN +
Sbjct: 435 ELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNL------PV 488
Query: 493 YSGNGGVLRDFLGLIRSTNPTIVLMAEQEAEHN-SPFLETRVSNSLRYYSALFDLIDYSL 551
S G L L ++ +P IV+ +++ + N +PF V +SL+Y+++L + +D +
Sbjct: 489 NSVASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPF-PNAVIHSLQYHTSLLESLDANQ 547
Query: 552 PLDSPVRIKIEEMFAR-EVRSIVACEGSDRLERHESFEN---WRRMMEQGGFRCMGISER 607
D IE + + + ++ ++RH E WR + Q GF +S+
Sbjct: 548 NQDDS---SIERFWVQPSIEKLL-------MKRHRWIERSPPWRILFTQCGFSPASLSQM 597
Query: 608 EMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
Q++ LL+ + V+K+ ++L + W + L TVSAW
Sbjct: 598 AEAQAECLLQRNPVRGFHVEKRQ---SSLVMCWQRKELVTVSAW 638
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 266 (98.7 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 73/232 (31%), Positives = 110/232 (47%)
Query: 433 SKQELNETGDRLSGFAEALNLPFEFHPV--VDRLEDVRLWMLHVKEKESVAVNCIFQLHK 490
S + + E G+R+ FA + +PF+F+ + V L + L L VK E +A+NC+ +H
Sbjct: 304 SHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHG 363
Query: 491 TLYSGNGGVLRD-FLGLIRSTNPTIVLMAEQEAE--------HNSPFLETRVSNSLRYYS 541
G+ RD + R P IV + E+EA+ + FL LR++
Sbjct: 364 IASRGSP---RDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRG-FGECLRWFR 419
Query: 542 ALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRC 601
F+ + S P S R+ +E R + +VACE SD ER E+ W R M GF
Sbjct: 420 VCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGA 479
Query: 602 MGISEREMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAP 653
+G S+ + LL+ Y G + + Q D A + L W DQP+ SAW P
Sbjct: 480 VGYSDEVADDVRALLRRYKEGVWSMV-QCPDAAGIFLCWRDQPVVWASAWRP 530
Score = 224 (83.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 65/252 (25%), Positives = 117/252 (46%)
Query: 288 LLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFH- 346
+L + A ++ + L +++SP G +L +Y+ +AL R++ +
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRT 205
Query: 347 -ITPPRDFDRVDDDSGAALRL-LNQATPIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQ 404
+T +S L + +P F H AN +L A DG+ ++HI+D
Sbjct: 206 MVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTF 265
Query: 405 GLQWPSFFQSLASRPNPPSHVRITGIGESKQELN----------ETGDRLSGFAEALNLP 454
QWP+ ++LA+R + H+R+T + + + +N E G+R+ FA + +P
Sbjct: 266 CTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVP 325
Query: 455 FEFHPV--VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRD-FLGLIRSTN 511
F+F+ + V L + L L VK E +A+NC+ +H G+ RD + R
Sbjct: 326 FKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSP---RDAVISSFRRLR 382
Query: 512 PTIVLMAEQEAE 523
P IV + E+EA+
Sbjct: 383 PRIVTVVEEEAD 394
Score = 37 (18.1 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 40 LDLPCSFSRKDSSRSQPI 57
L+ +FS KD++R+Q I
Sbjct: 148 LEAARAFSDKDTARAQQI 165
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 248 (92.4 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 100/411 (24%), Positives = 180/411 (43%)
Query: 259 SRNPYPHQGGVEASEEGTNQGEN----GFELVRLLTDCVEAIGSRNIPAVNHFIAKLGD- 313
S + YP Q + + G N ++ GF+ + L V+ + S + +++L
Sbjct: 94 SSDVYPGQN--QTTGYGFNSLDSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQR 151
Query: 314 VASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDF-DRVDDDSGAALRLLNQATP 372
+ SP G P+ R Y+ EAL ++ + ++ + R+ A++ + +P
Sbjct: 152 LRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRLSSWSEIVQRI-----RAIKEYSGISP 206
Query: 373 IPKFIHFTANEMLLRAFDGKDR---VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITG 429
IP F HFTAN+ +L + + VH++DF+I G Q+ S + + + +R+T
Sbjct: 207 IPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTA 266
Query: 430 I--GESKQELNETGDRLSGFAEALNLPFEFHPVVDR-LEDVRLWMLHVKEKESVAVNCIF 486
+ E E + L+ FA + + F+ V+ + E + + E E V
Sbjct: 267 VVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISP 326
Query: 487 QLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEA----EHNSPFLETRVSNSLRYYSA 542
+ + L SG + DF+ +R +P +V+ + E + F VS +L +Y+
Sbjct: 327 AIFRRL-SG----ITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFVS-ALEFYTM 380
Query: 543 LFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACE-GSDRLERHESFENWRRMMEQGGFRC 601
+ + +D + P V+ KI E F + A E +DR RH WR G R
Sbjct: 381 VLESLDAAAPPGDLVK-KIVEAFVLRPKISAAVETAADR--RHTGEMTWREAFCAAGMRP 437
Query: 602 MGISEREMLQSQMLLKMYSCGNYGV-KKQGQDGAALTLSWIDQPLYTVSAW 651
+ +S+ Q++ LL+ + V K+QG+ L L W + L SAW
Sbjct: 438 IQLSQFADFQAECLLEKAQVRGFHVAKRQGE----LVLCWHGRALVATSAW 484
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 241 (89.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 101/402 (25%), Positives = 165/402 (41%)
Query: 279 GENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVS 338
G+ F + +LL C AI S + + + L ++A P G RLT+ + AL R
Sbjct: 22 GDANF-MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAV 80
Query: 339 RLWP---HTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFTANEMLLRAFDGKDRV 395
P T P D + S L TP +F AN +L A +G V
Sbjct: 81 SKTPTLSSTISFLPQAD--ELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTV 138
Query: 396 HIIDFDIKQGLQWPSFFQSLASRPN-PPSHVRITGIGESKQ-------ELNETGDRLSGF 447
HI+D + +Q P+ ++ASR N PP +++T + S E G +L F
Sbjct: 139 HIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNF 198
Query: 448 AEALNLPFEFHPVVDRLED---VRLWMLHVKEK---ESVAVNCIFQLHKTLYSGNGGVLR 501
A N+ EF V D L L + E++ VNC L Y +
Sbjct: 199 ATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLR---Y-----IPE 250
Query: 502 DFLGLIRSTNPTIVLMAEQEAEHNS-PFLETRVS-NSLRYYSALFDLIDYS-LPLD---- 554
+ L S+ T+ L + +E V S + L +Y +P D
Sbjct: 251 EPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDT 310
Query: 555 --SPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQS 612
S R E + ++ ++VA EG++R+ER E+ W M + F + + E +
Sbjct: 311 FMSEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADV 370
Query: 613 QMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAWAPV 654
+ +L+ ++ G +G+KK+ D +L L+W + + W P+
Sbjct: 371 KAMLEEHAVG-WGMKKEDDD-ESLVLTWKGHSVVFATVWVPI 410
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 241 (89.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 102/405 (25%), Positives = 171/405 (42%)
Query: 269 VEASEEGTNQG-ENGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTA 327
+++SE+ + G + G +LL C AI + N V H++ L ++AS G RL A
Sbjct: 128 IKSSEKSSKDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAA 187
Query: 328 YYTEALALRVSR------LWP-HTFHITPPRDFDRVDDDSGAALRLLNQATPIPKFIHFT 380
+ AL +S WP TF + F + L + +P +
Sbjct: 188 FGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKT-------LLKFYEVSPWFALPNNM 240
Query: 381 ANEMLLR--AFDGKDR--VHIIDFDIKQGLQWPSFFQSLASR-PNPPSHVRITGIGESKQ 435
AN +L+ A D KD+ +HIID + G+QWP+ ++L+ R PP VRIT I +
Sbjct: 241 ANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTA 300
Query: 436 ELNET--------GDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQ 487
++ + G +L GFA +L + + V+D+L+ ++ E++ V F+
Sbjct: 301 DIPFSVGPPGYNYGSQLLGFARSLKINLQIS-VLDKLQ-----LIDTSPHENLIVCAQFR 354
Query: 488 LHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEAE-HNSPFLETRVSNSLRYYSALFDL 546
LH +S N + L +RS P V++ E E +S S L Y D
Sbjct: 355 LHHLKHSINDE-RGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDS 413
Query: 547 IDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGISE 606
++ K+ E E ++ G + +E E W M + GF E
Sbjct: 414 TSSGFKEENSEERKLME---GEATKVLMNAG----DMNEGKEKWYERMREAGFFVEAFEE 466
Query: 607 REMLQSQMLLKMYSCGNYGVKKQGQDGAALTLSWIDQPLYTVSAW 651
+ ++ LL+ Y N+ ++ + D A L W + + S W
Sbjct: 467 DAVDGAKSLLRKYD-NNWEIRMEDGDTFA-GLMWKGEAVSFCSLW 509
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 214 (80.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 97/418 (23%), Positives = 180/418 (43%)
Query: 250 PVEHDVGNGSRNPYPHQ--G-GVEASEEGTNQGENGFE-LVRLLTDCVEAIGSRNIPAVN 305
PV D+ + P P+Q G G + + N G + E L+R++ DC+E S + +
Sbjct: 64 PVFPDIDSSDVYPGPNQITGYGFNSLDSVDNGGFDYIEDLIRVV-DCIE---SDELHLAH 119
Query: 306 HFIAKLGD-VASPRGSPISRLTAYYTEAL-ALRVSRLWPHTFHITPPRDFDRVDDDSGAA 363
+++L + + G P+ R Y+ EAL +L F + D V A
Sbjct: 120 VVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQLFSWS-----DIVQKIR--A 172
Query: 364 LRLLNQATPIPKFIHFTANEMLLRAFDGKDR---VHIIDFDIKQGLQWPSFFQSLASRPN 420
++ + +PIP F HFTAN+ +L + + VH++DF+I G Q+ S + +A +
Sbjct: 173 IKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAEKSA 232
Query: 421 PPSHVRITGI--GESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKE 478
+R+T + + E + L+ FA + + F+ V+ + ++ L K
Sbjct: 233 NGGFLRVTAVVAEDCAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEI----LSFKAIR 288
Query: 479 SV-AVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQEA---EHNSPFLETRVS 534
V + + ++ G+ +F+ + +P +V+ + E S
Sbjct: 289 FVDGERTVVLISPAIFRRVIGIA-EFVNNLGRVSPNVVVFVDSEGCTETAGSGSFRREFV 347
Query: 535 NSLRYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMM 594
++ +Y+ + + +D + P V+ KI E F + A E + R WR M+
Sbjct: 348 SAFEFYTMVLESLDAAAPPGDLVK-KIVETFLLRPKISAAVETAAN-RRSAGQMTWREML 405
Query: 595 EQGGFRCMGISEREMLQSQMLLKMYSCGNYGV-KKQGQDGAALTLSWIDQPLYTVSAW 651
G R + +S+ Q++ LL+ + V K+QG+ L L W + L SAW
Sbjct: 406 CAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGE----LVLCWHGRALVATSAW 459
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 430 IGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLED---VRLWMLHVKE---KESVAVN 483
+G S +EL G +L FA N+ EF + D + L + E++ VN
Sbjct: 39 LGISYEEL---GSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVN 95
Query: 484 CIFQLH---KTLYSGNGGVLRD-FLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRY 539
C LH + + N LR FL +R NPTIV + +++++ S +R+ + Y
Sbjct: 96 CHMMLHYIPDEILTSN---LRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNY 152
Query: 540 YSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHE 585
+D + L S R E + ++ ++VA EG++R+ER E
Sbjct: 153 MWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLE 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 667 628 0.00091 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 625 (66 KB)
Total size of DFA: 356 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.91u 0.14s 50.05t Elapsed: 00:00:03
Total cpu time: 49.92u 0.14s 50.06t Elapsed: 00:00:03
Start: Fri May 10 23:10:14 2013 End: Fri May 10 23:10:17 2013