Query 005954
Match_columns 667
No_of_seqs 161 out of 684
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 12:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.2 0.015 5.2E-07 58.5 17.9 109 394-522 71-181 (261)
2 3dh0_A SAM dependent methyltra 96.3 0.11 3.7E-06 49.0 15.6 113 383-518 27-141 (219)
3 3dtn_A Putative methyltransfer 96.3 0.02 6.7E-07 54.8 10.1 176 383-604 33-211 (234)
4 2aot_A HMT, histamine N-methyl 96.0 0.11 3.6E-06 52.2 14.6 119 392-519 51-172 (292)
5 3dlc_A Putative S-adenosyl-L-m 96.0 0.066 2.2E-06 49.9 12.1 112 381-518 32-146 (219)
6 3bkx_A SAM-dependent methyltra 95.7 0.18 6.2E-06 49.3 14.6 123 383-527 33-167 (275)
7 1vl5_A Unknown conserved prote 95.7 0.1 3.5E-06 50.8 12.8 112 383-520 27-141 (260)
8 1xxl_A YCGJ protein; structura 94.7 0.47 1.6E-05 45.8 13.9 114 382-521 10-126 (239)
9 4a6d_A Hydroxyindole O-methylt 94.4 0.15 5.3E-06 53.1 10.3 160 382-604 168-331 (353)
10 3ujc_A Phosphoethanolamine N-m 94.4 0.21 7.3E-06 48.1 10.6 125 372-520 34-160 (266)
11 2ip2_A Probable phenazine-spec 94.3 0.42 1.4E-05 48.5 13.0 115 383-521 158-274 (334)
12 3kkz_A Uncharacterized protein 94.3 1.1 3.9E-05 43.7 15.5 114 381-520 33-151 (267)
13 3mgg_A Methyltransferase; NYSG 94.1 0.38 1.3E-05 47.1 11.9 106 392-521 36-144 (276)
14 1x19_A CRTF-related protein; m 94.0 0.53 1.8E-05 48.6 13.1 116 382-522 179-298 (359)
15 3h2b_A SAM-dependent methyltra 93.8 0.39 1.3E-05 44.7 10.6 97 394-518 42-139 (203)
16 2r3s_A Uncharacterized protein 93.7 0.84 2.9E-05 46.1 13.8 117 383-523 153-275 (335)
17 3gwz_A MMCR; methyltransferase 93.5 0.86 2.9E-05 47.5 13.8 116 383-523 192-311 (369)
18 3hnr_A Probable methyltransfer 93.5 0.87 3E-05 42.7 12.6 109 383-519 35-145 (220)
19 3f4k_A Putative methyltransfer 93.4 1.7 5.8E-05 41.8 14.7 118 377-520 29-151 (257)
20 1qzz_A RDMB, aclacinomycin-10- 93.2 1.4 4.7E-05 45.4 14.6 112 383-520 172-288 (374)
21 2p7i_A Hypothetical protein; p 93.1 0.53 1.8E-05 44.5 10.5 94 395-518 44-139 (250)
22 3i53_A O-methyltransferase; CO 92.9 0.62 2.1E-05 47.4 11.4 113 385-522 161-277 (332)
23 4htf_A S-adenosylmethionine-de 92.8 2.1 7.1E-05 42.2 14.8 109 385-519 61-172 (285)
24 3htx_A HEN1; HEN1, small RNA m 92.7 0.4 1.4E-05 56.8 10.6 124 385-524 713-839 (950)
25 3bus_A REBM, methyltransferase 92.6 1.5 5.3E-05 42.6 13.4 114 383-521 51-168 (273)
26 3e23_A Uncharacterized protein 92.6 1.2 4.1E-05 41.7 12.0 96 394-519 44-140 (211)
27 3mcz_A O-methyltransferase; ad 92.4 1.1 3.7E-05 45.8 12.3 117 384-522 169-290 (352)
28 3gu3_A Methyltransferase; alph 92.2 2.3 7.9E-05 42.2 14.2 106 392-521 21-128 (284)
29 4fsd_A Arsenic methyltransfera 92.1 1.5 5.1E-05 46.0 13.3 117 393-523 83-207 (383)
30 3sm3_A SAM-dependent methyltra 91.8 0.93 3.2E-05 42.6 10.3 108 394-524 31-146 (235)
31 3ou2_A SAM-dependent methyltra 91.7 1.4 4.7E-05 41.0 11.3 111 382-521 34-148 (218)
32 3dp7_A SAM-dependent methyltra 91.7 0.66 2.3E-05 48.3 9.9 118 384-523 170-291 (363)
33 1xtp_A LMAJ004091AAA; SGPP, st 91.5 0.65 2.2E-05 44.5 9.0 113 383-519 83-196 (254)
34 4e2x_A TCAB9; kijanose, tetron 91.3 0.62 2.1E-05 49.0 9.4 109 384-519 98-207 (416)
35 3vc1_A Geranyl diphosphate 2-C 90.9 2.7 9.3E-05 42.3 13.3 109 383-517 106-218 (312)
36 3l8d_A Methyltransferase; stru 90.6 1.8 6.3E-05 41.0 11.2 98 394-519 54-152 (242)
37 3g5l_A Putative S-adenosylmeth 90.0 2.2 7.6E-05 41.0 11.2 111 382-519 33-144 (253)
38 3e8s_A Putative SAM dependent 89.7 0.46 1.6E-05 44.3 6.0 54 381-443 40-93 (227)
39 3ccf_A Cyclopropane-fatty-acyl 89.6 3.2 0.00011 40.8 12.3 107 383-520 47-154 (279)
40 2p35_A Trans-aconitate 2-methy 89.5 2.3 7.8E-05 40.8 10.9 107 384-519 24-131 (259)
41 3jwg_A HEN1, methyltransferase 89.5 0.6 2E-05 44.1 6.7 120 383-524 19-145 (219)
42 3cc8_A Putative methyltransfer 89.4 3.5 0.00012 38.4 11.8 106 382-518 22-128 (230)
43 1tw3_A COMT, carminomycin 4-O- 89.4 3.9 0.00013 41.8 13.2 113 383-521 173-290 (360)
44 2vdw_A Vaccinia virus capping 88.9 2.6 9E-05 43.1 11.4 107 394-518 49-167 (302)
45 3jwh_A HEN1; methyltransferase 88.9 2.1 7.2E-05 40.3 10.0 116 384-521 20-142 (217)
46 2fk8_A Methoxy mycolic acid sy 88.3 8.1 0.00028 38.6 14.4 112 384-521 81-196 (318)
47 3hem_A Cyclopropane-fatty-acyl 88.3 4 0.00014 40.7 12.1 113 383-518 62-181 (302)
48 2o57_A Putative sarcosine dime 88.3 3 0.0001 41.2 11.1 115 383-522 68-190 (297)
49 1kpg_A CFA synthase;, cyclopro 88.0 2.5 8.5E-05 41.6 10.3 112 384-521 55-170 (287)
50 2qe6_A Uncharacterized protein 88.0 9.9 0.00034 38.1 14.8 138 366-522 46-199 (274)
51 2g72_A Phenylethanolamine N-me 86.9 2.8 9.5E-05 41.5 9.9 45 393-445 71-115 (289)
52 3m70_A Tellurite resistance pr 86.8 3.5 0.00012 40.6 10.5 111 383-518 110-221 (286)
53 3reo_A (ISO)eugenol O-methyltr 86.6 1.7 6E-05 45.3 8.6 109 383-522 192-303 (368)
54 3dli_A Methyltransferase; PSI- 85.8 1.4 4.8E-05 42.3 6.8 96 394-518 42-138 (240)
55 2xvm_A Tellurite resistance pr 85.7 8.7 0.0003 34.9 11.9 113 382-519 21-136 (199)
56 3bgv_A MRNA CAP guanine-N7 met 84.1 5.2 0.00018 40.1 10.4 114 393-518 34-153 (313)
57 3i9f_A Putative type 11 methyl 83.9 5.8 0.0002 35.5 9.7 101 385-518 9-110 (170)
58 3lst_A CALO1 methyltransferase 83.7 3.1 0.0001 42.8 8.7 44 383-433 174-217 (348)
59 3thr_A Glycine N-methyltransfe 83.7 1.9 6.7E-05 42.4 6.9 124 383-519 47-174 (293)
60 2yxd_A Probable cobalt-precorr 83.5 5.8 0.0002 35.4 9.5 104 384-519 26-131 (183)
61 1nkv_A Hypothetical protein YJ 83.0 5.5 0.00019 38.1 9.7 112 383-520 26-141 (256)
62 3u81_A Catechol O-methyltransf 82.4 3.6 0.00012 39.1 8.1 107 395-521 60-171 (221)
63 3p9n_A Possible methyltransfer 82.4 5.7 0.0002 36.6 9.2 110 394-525 45-158 (189)
64 1vlm_A SAM-dependent methyltra 81.8 23 0.00078 33.3 13.4 89 394-518 48-137 (219)
65 3ofk_A Nodulation protein S; N 81.4 12 0.0004 34.9 11.1 111 384-519 42-153 (216)
66 3g2m_A PCZA361.24; SAM-depende 81.1 3.3 0.00011 41.2 7.6 115 383-519 73-189 (299)
67 1dus_A MJ0882; hypothetical pr 81.1 11 0.00037 33.8 10.4 115 381-521 40-158 (194)
68 3mq2_A 16S rRNA methyltransfer 80.8 2 6.9E-05 40.4 5.6 118 385-520 19-140 (218)
69 1ve3_A Hypothetical protein PH 80.6 9 0.00031 35.7 10.0 101 394-518 39-140 (227)
70 3g5t_A Trans-aconitate 3-methy 80.0 8.8 0.0003 38.1 10.3 111 392-518 35-147 (299)
71 3p9c_A Caffeic acid O-methyltr 79.9 6.7 0.00023 40.9 9.7 108 383-521 190-300 (364)
72 3cgg_A SAM-dependent methyltra 79.9 9.4 0.00032 34.3 9.6 52 383-444 37-88 (195)
73 2yqz_A Hypothetical protein TT 79.8 13 0.00045 35.4 11.1 102 392-519 38-140 (263)
74 3bkw_A MLL3908 protein, S-aden 79.6 8 0.00028 36.5 9.4 110 382-518 32-142 (243)
75 3ege_A Putative methyltransfer 79.5 3.5 0.00012 40.2 7.0 115 383-529 24-140 (261)
76 1fp2_A Isoflavone O-methyltran 77.7 4.6 0.00016 41.4 7.6 98 393-521 188-290 (352)
77 1fp1_D Isoliquiritigenin 2'-O- 76.5 5.6 0.00019 41.2 7.9 108 383-521 198-308 (372)
78 3ocj_A Putative exported prote 76.2 10 0.00036 37.8 9.5 104 394-518 119-225 (305)
79 2zfu_A Nucleomethylin, cerebra 76.2 5.6 0.00019 37.2 7.1 40 384-435 57-97 (215)
80 3uwp_A Histone-lysine N-methyl 75.7 11 0.00039 41.2 10.2 120 383-518 163-286 (438)
81 1y8c_A S-adenosylmethionine-de 75.1 13 0.00043 35.0 9.3 104 393-520 37-142 (246)
82 1wzn_A SAM-dependent methyltra 74.9 13 0.00044 35.5 9.5 111 385-520 33-145 (252)
83 3fzg_A 16S rRNA methylase; met 74.8 5.1 0.00017 39.7 6.6 111 384-520 42-152 (200)
84 3lcc_A Putative methyl chlorid 74.8 21 0.00071 33.8 10.8 101 395-518 68-169 (235)
85 3r0q_C Probable protein argini 74.5 17 0.00058 38.0 11.0 145 383-551 53-207 (376)
86 2p8j_A S-adenosylmethionine-de 74.3 27 0.00094 32.0 11.2 103 394-519 24-127 (209)
87 1ri5_A MRNA capping enzyme; me 73.2 22 0.00076 34.5 10.8 108 394-519 65-173 (298)
88 1wy7_A Hypothetical protein PH 71.0 39 0.0013 31.1 11.5 98 393-516 49-146 (207)
89 2gs9_A Hypothetical protein TT 69.8 26 0.00088 32.4 10.0 104 385-521 29-134 (211)
90 3iv6_A Putative Zn-dependent a 69.2 5.3 0.00018 40.5 5.4 54 383-445 35-88 (261)
91 3hm2_A Precorrin-6Y C5,15-meth 69.1 12 0.00039 33.5 7.2 61 383-454 15-75 (178)
92 1yzh_A TRNA (guanine-N(7)-)-me 68.9 22 0.00076 33.3 9.4 114 394-521 42-157 (214)
93 4dcm_A Ribosomal RNA large sub 68.6 14 0.00047 39.0 8.7 124 381-520 210-334 (375)
94 2esr_A Methyltransferase; stru 68.5 14 0.00048 33.3 7.7 107 394-525 32-143 (177)
95 3d2l_A SAM-dependent methyltra 67.9 29 0.00098 32.6 10.0 109 385-520 27-137 (243)
96 3dxy_A TRNA (guanine-N(7)-)-me 67.2 17 0.00058 35.0 8.4 114 393-521 34-151 (218)
97 3njr_A Precorrin-6Y methylase; 65.9 31 0.0011 32.5 9.8 62 384-458 46-109 (204)
98 2kw5_A SLR1183 protein; struct 65.9 79 0.0027 28.8 12.4 98 396-519 32-130 (202)
99 3giw_A Protein of unknown func 65.9 19 0.00066 37.0 8.9 146 363-523 44-204 (277)
100 3g07_A 7SK snRNA methylphospha 64.8 7.1 0.00024 39.1 5.3 47 394-447 47-93 (292)
101 2ex4_A Adrenal gland protein A 64.8 26 0.0009 33.3 9.1 107 393-521 79-187 (241)
102 2fyt_A Protein arginine N-meth 63.8 24 0.00082 36.4 9.2 112 383-518 54-169 (340)
103 3pfg_A N-methyltransferase; N, 63.2 14 0.00048 35.6 6.9 98 394-519 51-150 (263)
104 4hg2_A Methyltransferase type 62.6 38 0.0013 33.6 10.2 101 396-528 42-144 (257)
105 2y1w_A Histone-arginine methyl 62.3 24 0.00081 36.4 8.8 113 383-519 40-154 (348)
106 3eey_A Putative rRNA methylase 61.7 69 0.0024 29.1 11.1 107 395-518 24-137 (197)
107 1xj5_A Spermidine synthase 1; 61.3 24 0.00083 36.7 8.8 118 394-526 121-241 (334)
108 2fpo_A Methylase YHHF; structu 60.5 19 0.00065 33.8 7.2 103 395-522 56-162 (202)
109 1zg3_A Isoflavanone 4'-O-methy 58.5 7.8 0.00027 39.8 4.4 107 384-521 182-295 (358)
110 3fut_A Dimethyladenosine trans 58.2 21 0.00073 36.2 7.5 101 368-488 17-122 (271)
111 3p2e_A 16S rRNA methylase; met 58.2 16 0.00054 35.4 6.3 120 384-518 16-137 (225)
112 3q7e_A Protein arginine N-meth 57.4 29 0.00098 35.9 8.5 104 395-521 68-174 (349)
113 1uwv_A 23S rRNA (uracil-5-)-me 54.1 79 0.0027 33.7 11.5 109 385-519 278-388 (433)
114 3frh_A 16S rRNA methylase; met 53.5 33 0.0011 35.1 7.9 100 394-520 106-206 (253)
115 2ozv_A Hypothetical protein AT 52.7 30 0.001 34.0 7.4 128 384-521 26-171 (260)
116 3ggd_A SAM-dependent methyltra 52.2 14 0.00047 35.2 4.7 105 394-521 57-165 (245)
117 3lcv_B Sisomicin-gentamicin re 52.2 60 0.0021 33.7 9.6 133 384-548 125-259 (281)
118 3b3j_A Histone-arginine methyl 52.1 18 0.00061 39.6 6.2 114 383-520 148-263 (480)
119 3grz_A L11 mtase, ribosomal pr 51.5 25 0.00085 32.5 6.3 65 381-457 46-113 (205)
120 1g6q_1 HnRNP arginine N-methyl 50.8 60 0.0021 33.1 9.6 113 384-519 29-144 (328)
121 2pjd_A Ribosomal RNA small sub 50.7 16 0.00054 37.5 5.2 118 381-519 184-302 (343)
122 3m33_A Uncharacterized protein 50.5 66 0.0023 30.3 9.2 40 395-443 50-89 (226)
123 2o07_A Spermidine synthase; st 50.0 77 0.0026 32.2 10.1 114 394-523 96-212 (304)
124 2pt6_A Spermidine synthase; tr 49.5 57 0.0019 33.5 9.1 111 394-522 117-232 (321)
125 1nv8_A HEMK protein; class I a 49.4 50 0.0017 33.1 8.5 52 395-458 125-178 (284)
126 2a14_A Indolethylamine N-methy 49.4 1.1E+02 0.0037 29.8 10.8 47 391-445 53-99 (263)
127 1l3i_A Precorrin-6Y methyltran 49.2 33 0.0011 30.5 6.5 53 384-445 24-76 (192)
128 4dzr_A Protein-(glutamine-N5) 48.9 13 0.00046 33.9 3.9 55 384-445 20-75 (215)
129 3e05_A Precorrin-6Y C5,15-meth 48.8 23 0.0008 32.7 5.6 57 383-446 30-86 (204)
130 2vdv_E TRNA (guanine-N(7)-)-me 48.2 1.4E+02 0.0048 28.5 11.3 48 393-447 49-96 (246)
131 4azs_A Methyltransferase WBDD; 48.1 32 0.0011 38.1 7.5 110 393-521 66-176 (569)
132 3adn_A Spermidine synthase; am 48.0 72 0.0025 32.4 9.5 135 394-548 84-223 (294)
133 1o9g_A RRNA methyltransferase; 47.7 30 0.001 33.3 6.4 56 385-445 43-98 (250)
134 2ift_A Putative methylase HI07 47.7 93 0.0032 29.0 9.7 106 395-524 55-167 (201)
135 3g89_A Ribosomal RNA small sub 47.3 43 0.0015 32.9 7.5 102 392-518 79-182 (249)
136 2i7c_A Spermidine synthase; tr 47.2 45 0.0016 33.4 7.8 110 394-521 79-193 (283)
137 1zx0_A Guanidinoacetate N-meth 46.9 1.3E+02 0.0044 28.4 10.7 105 393-517 60-167 (236)
138 3lbf_A Protein-L-isoaspartate 46.6 1E+02 0.0034 28.3 9.6 55 383-446 67-121 (210)
139 3tqs_A Ribosomal RNA small sub 46.3 44 0.0015 33.3 7.5 53 384-445 20-72 (255)
140 2yxe_A Protein-L-isoaspartate 46.1 32 0.0011 31.9 6.1 57 384-446 68-124 (215)
141 2pxx_A Uncharacterized protein 46.0 73 0.0025 28.9 8.5 45 393-445 42-86 (215)
142 1zq9_A Probable dimethyladenos 46.0 63 0.0022 32.3 8.6 53 383-444 18-70 (285)
143 3ckk_A TRNA (guanine-N(7)-)-me 44.3 82 0.0028 30.5 9.0 50 391-447 44-93 (235)
144 3q87_B N6 adenine specific DNA 44.0 78 0.0027 28.7 8.3 34 396-439 26-59 (170)
145 2avn_A Ubiquinone/menaquinone 43.7 1.2E+02 0.004 29.2 10.0 97 393-519 54-151 (260)
146 2qn6_B Translation initiation 43.4 30 0.001 30.2 4.9 38 421-458 50-91 (93)
147 1u2z_A Histone-lysine N-methyl 42.6 1.1E+02 0.0037 33.3 10.3 117 383-518 232-357 (433)
148 1inl_A Spermidine synthase; be 42.5 1E+02 0.0034 31.1 9.5 110 395-520 92-205 (296)
149 2fhp_A Methylase, putative; al 41.9 75 0.0026 28.3 7.7 108 394-524 45-158 (187)
150 2jjq_A Uncharacterized RNA met 41.8 1.7E+02 0.0059 31.3 11.7 95 395-519 292-386 (425)
151 3tfw_A Putative O-methyltransf 41.7 65 0.0022 31.2 7.8 101 395-519 65-169 (248)
152 2i62_A Nicotinamide N-methyltr 41.1 79 0.0027 29.9 8.1 47 391-445 54-100 (265)
153 3bwc_A Spermidine synthase; SA 40.6 1.7E+02 0.0057 29.5 10.9 112 394-521 96-211 (304)
154 3bxo_A N,N-dimethyltransferase 40.1 2.1E+02 0.0073 26.4 10.9 99 393-519 40-140 (239)
155 1m6y_A S-adenosyl-methyltransf 39.5 31 0.0011 35.5 5.3 94 384-490 17-112 (301)
156 1ne2_A Hypothetical protein TA 39.1 41 0.0014 30.9 5.6 45 393-445 51-95 (200)
157 1mjf_A Spermidine synthase; sp 38.8 65 0.0022 32.1 7.4 109 395-521 77-194 (281)
158 3tm4_A TRNA (guanine N2-)-meth 38.7 85 0.0029 32.7 8.5 110 392-518 216-329 (373)
159 2gpy_A O-methyltransferase; st 38.6 1.5E+02 0.0051 27.9 9.6 101 395-519 56-159 (233)
160 1ws6_A Methyltransferase; stru 37.5 43 0.0015 29.4 5.3 103 395-523 43-150 (171)
161 1jsx_A Glucose-inhibited divis 36.9 32 0.0011 31.6 4.5 96 395-519 67-164 (207)
162 3mb5_A SAM-dependent methyltra 36.9 57 0.0019 31.1 6.4 57 384-446 84-140 (255)
163 3bzb_A Uncharacterized protein 36.8 3.2E+02 0.011 26.9 12.1 42 395-444 81-123 (281)
164 3mti_A RRNA methylase; SAM-dep 36.7 43 0.0015 30.3 5.2 43 395-446 24-66 (185)
165 1iy9_A Spermidine synthase; ro 35.9 2.1E+02 0.0073 28.3 10.6 112 394-521 76-190 (275)
166 3uzu_A Ribosomal RNA small sub 35.4 1.1E+02 0.0037 30.9 8.5 55 384-443 33-87 (279)
167 2gb4_A Thiopurine S-methyltran 35.0 74 0.0025 31.3 7.0 41 393-442 68-108 (252)
168 2b25_A Hypothetical protein; s 34.7 59 0.002 32.9 6.4 71 372-448 84-154 (336)
169 4hc4_A Protein arginine N-meth 34.1 78 0.0027 33.6 7.4 109 383-517 73-186 (376)
170 2pbf_A Protein-L-isoaspartate 33.8 69 0.0024 29.9 6.3 61 384-446 69-131 (227)
171 1i1n_A Protein-L-isoaspartate 32.8 66 0.0023 30.0 6.0 57 384-446 66-124 (226)
172 2pwy_A TRNA (adenine-N(1)-)-me 32.7 67 0.0023 30.4 6.1 59 383-447 86-144 (258)
173 3lpm_A Putative methyltransfer 32.3 1.2E+02 0.0041 29.3 7.9 79 393-486 49-129 (259)
174 1i9g_A Hypothetical protein RV 31.8 75 0.0026 30.7 6.4 59 383-447 89-147 (280)
175 2h1r_A Dimethyladenosine trans 31.8 83 0.0028 31.7 6.9 54 383-445 32-85 (299)
176 3dmg_A Probable ribosomal RNA 31.5 3.2E+02 0.011 28.7 11.6 108 393-521 233-341 (381)
177 1dl5_A Protein-L-isoaspartate 29.9 57 0.0019 32.9 5.3 66 382-457 64-130 (317)
178 2h00_A Methyltransferase 10 do 29.3 55 0.0019 31.4 4.9 55 393-458 65-121 (254)
179 1r18_A Protein-L-isoaspartate( 28.8 99 0.0034 29.0 6.5 63 384-447 73-137 (227)
180 3gru_A Dimethyladenosine trans 28.8 1.3E+02 0.0043 30.8 7.7 67 370-445 22-93 (295)
181 2b3t_A Protein methyltransfera 28.7 72 0.0025 31.2 5.7 61 385-457 102-163 (276)
182 2ipx_A RRNA 2'-O-methyltransfe 28.3 2.2E+02 0.0074 26.8 8.8 41 394-440 78-118 (233)
183 3dr5_A Putative O-methyltransf 28.2 61 0.0021 31.1 5.0 56 389-454 52-107 (221)
184 3tr6_A O-methyltransferase; ce 27.5 65 0.0022 30.0 4.9 54 395-458 66-121 (225)
185 1yb2_A Hypothetical protein TA 26.9 61 0.0021 31.8 4.8 55 384-444 101-155 (275)
186 1pjz_A Thiopurine S-methyltran 26.5 78 0.0027 29.6 5.3 42 393-443 22-63 (203)
187 1vbf_A 231AA long hypothetical 25.4 81 0.0028 29.4 5.2 53 384-445 61-113 (231)
188 2nxc_A L11 mtase, ribosomal pr 25.4 83 0.0028 30.7 5.4 50 395-457 122-171 (254)
189 2ksn_A Ubiquitin domain-contai 25.1 80 0.0027 29.5 4.8 39 281-320 54-92 (137)
190 1o54_A SAM-dependent O-methylt 24.1 1E+02 0.0035 30.0 5.8 56 384-445 103-158 (277)
191 1jg1_A PIMT;, protein-L-isoasp 24.0 73 0.0025 30.2 4.6 54 384-445 82-135 (235)
192 3ftd_A Dimethyladenosine trans 23.7 67 0.0023 31.7 4.4 52 384-443 22-73 (249)
193 1qam_A ERMC' methyltransferase 23.5 72 0.0025 31.1 4.5 53 384-445 21-73 (244)
194 3duw_A OMT, O-methyltransferas 23.3 85 0.0029 29.2 4.9 54 395-458 60-115 (223)
195 2kl8_A OR15; structural genomi 23.2 1.4E+02 0.0047 24.8 5.4 35 422-458 41-75 (85)
196 3tma_A Methyltransferase; thum 23.2 1.7E+02 0.0059 29.8 7.5 112 385-513 195-310 (354)
197 2b2c_A Spermidine synthase; be 22.1 2.4E+02 0.0081 28.8 8.3 131 395-545 110-244 (314)
198 3a27_A TYW2, uncharacterized p 20.6 6E+02 0.02 24.8 11.1 95 396-518 122-217 (272)
199 1xdz_A Methyltransferase GIDB; 20.1 1.5E+02 0.005 28.3 5.9 100 394-519 71-173 (240)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.18 E-value=0.015 Score=58.53 Aligned_cols=109 Identities=15% Similarity=0.232 Sum_probs=66.1
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|. +...|+.+- +.+..+||||+.+...|+...+++.++. ...+++|. ...++++.
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~--~~D~~~~~----- 136 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVI--EGDIRDIA----- 136 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEE--ESCTTTCC-----
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEe--eccccccc-----
Confidence 3479999999984 455566543 2345899999999999988887765432 22345553 22333332
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecC
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEA 522 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEa 522 (667)
...-.+++. .+.||++.. .....+|+.| |.|+|. ++++.|.-.
T Consensus 137 ~~~~d~v~~--~~~l~~~~~----~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 IENASMVVL--NFTLQFLEP----SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp CCSEEEEEE--ESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccccee--eeeeeecCc----hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 222234444 456777521 2345677776 569998 455666543
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.33 E-value=0.11 Score=49.02 Aligned_cols=113 Identities=17% Similarity=0.256 Sum_probs=67.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEec
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVV 461 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~ 461 (667)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+.+...++.+.+++.. .+++ ++|. .
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~ 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEEMVNYAWEKVNK----LGLKNVEVL--K 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHHHHHHHHHHHHH----HTCTTEEEE--E
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHHHHHHHHHHHHH----cCCCcEEEE--e
Confidence 567777765556789999999997554444443 2346999999999888877776543 3443 4443 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
..++++ ....+..=+|-+...||++ . ....+|+.+ +-|+|.-++++
T Consensus 95 ~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 95 SEENKI-----PLPDNTVDFIFMAFTFHEL-S-----EPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp CBTTBC-----SSCSSCEEEEEEESCGGGC-S-----SHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccC-----CCCCCCeeEEEeehhhhhc-C-----CHHHHHHHHHHHhCCCeEEEE
Confidence 222222 2223323344455566775 2 235566555 67999844443
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.25 E-value=0.02 Score=54.85 Aligned_cols=176 Identities=12% Similarity=0.165 Sum_probs=92.2
Q ss_pred HHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 383 EMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 383 qAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
+.+++.+. ..+...|+|+|.|.|.- ...|+.+- |..++|||+.+...++.+.+++.. .+ .++|. .
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~--~ 98 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEKMLEIAKNRFRG----NL-KVKYI--E 98 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHHHHHHHHHHTCS----CT-TEEEE--E
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHhhcc----CC-CEEEE--e
Confidence 56666665 35568999999999953 33344332 347999999998888777665432 22 34442 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEE-eeecCCCCCcchhHHHHHHHHH
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLM-AEQEAEHNSPFLETRVSNSLRY 539 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVl-vEqEadhNsp~F~~RF~EAL~y 539 (667)
..++++.. . +..=+|-|...||++ .+ .....+|+.+ +-|+|.-+++ ++... .+.+.+...+...
T Consensus 99 ~d~~~~~~-----~-~~fD~v~~~~~l~~~-~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~~~~--- 164 (234)
T 3dtn_A 99 ADYSKYDF-----E-EKYDMVVSALSIHHL-ED---EDKKELYKRSYSILKESGIFINADLVH-GETAFIENLNKTI--- 164 (234)
T ss_dssp SCTTTCCC-----C-SCEEEEEEESCGGGS-CH---HHHHHHHHHHHHHEEEEEEEEEEEECB-CSSHHHHHHHHHH---
T ss_pred CchhccCC-----C-CCceEEEEeCccccC-CH---HHHHHHHHHHHHhcCCCcEEEEEEecC-CCChhhhhHHHHH---
Confidence 23333221 1 223344455677876 22 1233566665 5699985444 44432 2333332222211
Q ss_pred HHHHHHHhhhhCCCCcHHHHHHHHHhhhhhhheeeccCCCccccccchhHHHHHHHcCCCeeccC
Q 005954 540 YSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGI 604 (667)
Q Consensus 540 YsAlFDSLea~lp~~s~eR~~iE~~fgrEI~NIVAcEG~dRvERhE~~~qWr~Rm~rAGF~~vpL 604 (667)
+...+.. ..++ ..++.+..... ...+.-+.+.|+..|++|||+.+.+
T Consensus 165 ~~~~~~~--~~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 165 WRQYVEN--SGLT-------------EEEIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHHHT--SSCC-------------HHHHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHh--cCCC-------------HHHHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 1111111 1111 01122222111 2345667889999999999999864
No 4
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.02 E-value=0.11 Score=52.20 Aligned_cols=119 Identities=9% Similarity=0.066 Sum_probs=67.0
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccc-c
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRL-W 470 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~-~ 470 (667)
....+|+|+|.|-|.--..++..|+.+.. .-.+.+|||+.+.+.++...+++.+...--++.|+|... ..+++.. +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKE--TSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECS--CHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEec--chhhhhhhh
Confidence 45689999999999544456777765431 113345999999998887776653211111344554422 2222210 0
Q ss_pred ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCcE-EEEee
Q 005954 471 MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPTI-VLMAE 519 (667)
Q Consensus 471 ~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~PkV-VVlvE 519 (667)
.....++..=+|-|...||++ . .+..+|+.++ -|+|.- +++++
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~-~-----d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYV-K-----DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGC-S-----CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeeeec-C-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 000122333356677778886 2 2456676664 579994 44444
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.99 E-value=0.066 Score=49.90 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=68.4
Q ss_pred hhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 381 ANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 381 ANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
..+.|++.+..... +|+|+|.|.|. +...|+.+ +..++|||+.+...++.+.+++. ..++. ++|.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~~~~~ 98 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKHMNEIALKNIA----DANLNDRIQIV 98 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHHHHHHHHHHHH----hccccCceEEE
Confidence 33566777765656 99999999985 45555554 35899999999988877776654 34543 4443
Q ss_pred EeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 459 PVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 459 ~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...++++ ...++..=+|-|...||++ . ....+|+.+ +-|+|.-.++.
T Consensus 99 --~~d~~~~-----~~~~~~~D~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 99 --QGDVHNI-----PIEDNYADLIVSRGSVFFW-E-----DVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp --ECBTTBC-----SSCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred --EcCHHHC-----CCCcccccEEEECchHhhc-c-----CHHHHHHHHHHhCCCCCEEEE
Confidence 2223322 2223333344455567775 2 245566555 56899865554
No 6
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.74 E-value=0.18 Score=49.28 Aligned_cols=123 Identities=19% Similarity=0.129 Sum_probs=68.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChH------HHHHHHHHHHHHHHHcCC--c
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQ------ELNETGDRLSGFAEALNL--P 454 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~------~L~etG~RL~~fA~slgV--p 454 (667)
..|++.+.-...-+|+|+|.+.|.--. .|+.+-+ |..++|||+.+.. .++.+.+++. ..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~----~l~~~~g--~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSA----VLADQVG--SSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHH----HHHHHHC--TTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHH----HHHHHhC--CCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCc
Confidence 356666654555689999999885333 3443321 2368999998775 6666665543 3344 2
Q ss_pred eEEEEeccccccccccccccCCC--cEEEEEeccchhhcccCCCCChHHHHHHHHHhcCC--cEEEEeeecCCCCCc
Q 005954 455 FEFHPVVDRLEDVRLWMLHVKEK--ESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNP--TIVLMAEQEAEHNSP 527 (667)
Q Consensus 455 FEF~~V~~~lE~l~~~~L~i~~g--EaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~P--kVVVlvEqEadhNsp 527 (667)
.+|... . ++....+...++ ++|+ |...|||+ .+ ...+++.++.+.| ..+++.+.....+.+
T Consensus 103 v~~~~~--d--~~~~~~~~~~~~~fD~v~--~~~~l~~~-~~-----~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 103 LTVHFN--T--NLSDDLGPIADQHFDRVV--LAHSLWYF-AS-----ANALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp EEEECS--C--CTTTCCGGGTTCCCSEEE--EESCGGGS-SC-----HHHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred eEEEEC--C--hhhhccCCCCCCCEEEEE--EccchhhC-CC-----HHHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 444322 1 111111122222 4444 34445664 22 3458888998887 477777776654443
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.73 E-value=0.1 Score=50.84 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=66.4
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEec
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVV 461 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~ 461 (667)
..|++.+.-...-+|+|+|.+.|. +...|+.+. + ++|||+.+...++.+.+++. ..|++ ++|. .
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~~l~~a~~~~~----~~~~~~v~~~--~ 91 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTEDILKVARAFIE----GNGHQQVEYV--Q 91 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHHH----HTTCCSEEEE--E
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHHHHHHHHHHHH----hcCCCceEEE--E
Confidence 345555555556689999999885 555666653 1 89999999988877766543 34554 4443 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEE-eee
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLM-AEQ 520 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVl-vEq 520 (667)
..++++ ...++..=+|-|.+.||++ .| ...+|+.+ |-|+|.-.++ ++.
T Consensus 92 ~d~~~l-----~~~~~~fD~V~~~~~l~~~-~d-----~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 92 GDAEQM-----PFTDERFHIVTCRIAAHHF-PN-----PASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CCC-CC-----CSCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecHHhC-----CCCCCCEEEEEEhhhhHhc-CC-----HHHHHHHHHHHcCCCCEEEEEEc
Confidence 223322 2223333344455667875 22 34555554 6799985444 444
No 8
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.74 E-value=0.47 Score=45.82 Aligned_cols=114 Identities=9% Similarity=0.171 Sum_probs=67.6
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPV 460 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V 460 (667)
+.-+++.+.-.+.-+|+|+|.+.|. +...|+.+. + ++|+|+.+...++.+.+++.+ .|++ ++|.
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~-- 74 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKEMVEVASSFAQE----KGVENVRFQ-- 74 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHHHH----HTCCSEEEE--
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHHHHHHHHHHHHH----cCCCCeEEE--
Confidence 3445666666666789999999986 445556542 1 899999998888776665543 3443 4443
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEE-Eeeec
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVL-MAEQE 521 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVV-lvEqE 521 (667)
...++++ ...++..=+|-|...+|++. ....+|+.+ +-|+|.-.+ +++..
T Consensus 75 ~~d~~~~-----~~~~~~fD~v~~~~~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 75 QGTAESL-----PFPDDSFDIITCRYAAHHFS------DVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp ECBTTBC-----CSCTTCEEEEEEESCGGGCS------CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ecccccC-----CCCCCcEEEEEECCchhhcc------CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 2233333 22233333444556677752 245556554 678998544 44544
No 9
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.44 E-value=0.15 Score=53.10 Aligned_cols=160 Identities=22% Similarity=0.302 Sum_probs=86.8
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
.+.|++++.-...-+|||+|-+.|. ++.+|+++- |.+|+|..+.+ +.++.+.+++. .+ ..=..+|.+-
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp-~v~~~a~~~~~-~~--~~~rv~~~~g- 235 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP-EVVWTAKQHFS-FQ--EEEQIDFQEG- 235 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH-HHHHHHHHHSC-C----CCSEEEEES-
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH-HHHHHHHHhhh-hc--ccCceeeecC-
Confidence 4677887765555689999999995 555666543 46899988763 34444433321 11 1112444321
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecCC--CCCcchhHHHHHHH
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEAE--HNSPFLETRVSNSL 537 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEad--hNsp~F~~RF~EAL 537 (667)
+-+++ .+...+++... .-||.. .| .....+|+.+ +.|+|. .++++|.-.+ .+.|.+
T Consensus 236 D~~~~------~~~~~D~~~~~--~vlh~~-~d---~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~-------- 295 (353)
T 4a6d_A 236 DFFKD------PLPEADLYILA--RVLHDW-AD---GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL-------- 295 (353)
T ss_dssp CTTTS------CCCCCSEEEEE--SSGGGS-CH---HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH--------
T ss_pred ccccC------CCCCceEEEee--eecccC-CH---HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH--------
Confidence 11111 12234444443 346764 22 2345677776 569997 5666675433 223322
Q ss_pred HHHHHHHHHhhhhCCCCcHHHHHHHHHhhhhhhheeeccCCCccccccchhHHHHHHHcCCCeeccC
Q 005954 538 RYYSALFDLIDYSLPLDSPVRIKIEEMFAREVRSIVACEGSDRLERHESFENWRRMMEQGGFRCMGI 604 (667)
Q Consensus 538 ~yYsAlFDSLea~lp~~s~eR~~iE~~fgrEI~NIVAcEG~dRvERhE~~~qWr~Rm~rAGF~~vpL 604 (667)
.++||.. | .+.+.|.+| +.++|++.+++|||+.+.+
T Consensus 296 ---~~~~dl~----------------m-------l~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 ---TQLYSLN----------------M-------LVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp ---HHHHHHH----------------H-------HHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred ---HHHHHHH----------------H-------HHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 1222210 1 112335554 4589999999999998764
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.43 E-value=0.21 Score=48.06 Aligned_cols=125 Identities=12% Similarity=0.087 Sum_probs=69.0
Q ss_pred CccchhhhhhhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc
Q 005954 372 PIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL 451 (667)
Q Consensus 372 Pf~kFAhftANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl 451 (667)
.++.-.....-..|++.+.-...-+|+|+|.|.|.-=..|.+.+ + .++|||+.+...++.+.+++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~----~~v~~vD~s~~~~~~a~~~~~~~---- 101 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY----G----AHTHGIDICSNIVNMANERVSGN---- 101 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHHHHHHHHHTCCSC----
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc----C----CEEEEEeCCHHHHHHHHHHhhcC----
Confidence 33344444445667777765666799999999885433333333 1 48999999988776665543322
Q ss_pred CCceEEEEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeee
Q 005954 452 NLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQ 520 (667)
Q Consensus 452 gVpFEF~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEq 520 (667)
-..+|. ...++++ ....+..=+|-+...|||+.. .....+|+.+ +-|+|.- +++++.
T Consensus 102 -~~~~~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 102 -NKIIFE--ANDILTK-----EFPENNFDLIYSRDAILALSL----ENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp -TTEEEE--ECCTTTC-----CCCTTCEEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCeEEE--ECccccC-----CCCCCcEEEEeHHHHHHhcCh----HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 233432 2222222 222233334445556777521 2345566655 5689974 444444
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.31 E-value=0.42 Score=48.54 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=63.6
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
..|++.+.-.. .+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++.+.. +.-.++|..-
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~-- 224 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGG-- 224 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEES--
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecC--
Confidence 56677664344 899999999995 444444432 3469999998 666666666654332 1112444322
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeec
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQE 521 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqE 521 (667)
.+.+ .+. ..-++++ +..-||+.- + .....+|+.+ +.|+|. .++++|.-
T Consensus 225 d~~~----~~~-~~~D~v~--~~~vl~~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 225 DMLQ----EVP-SNGDIYL--LSRIIGDLD-E---AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CTTT----CCC-SSCSEEE--EESCGGGCC-H---HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCC----CCC-CCCCEEE--EchhccCCC-H---HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2211 011 1123444 334567642 2 2344677766 568997 45556654
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.26 E-value=1.1 Score=43.68 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=67.9
Q ss_pred hhHHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEE
Q 005954 381 ANEMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEF 457 (667)
Q Consensus 381 ANqAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF 457 (667)
.-..+++.+. -...-+|+|+|.|.| .+...|+.++ ..++|||+.+...++.+.+++ +..|++ .+|
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~~----~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~ 100 (267)
T 3kkz_A 33 VTLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGHV----TGQVTGLDFLSGFIDIFNRNA----RQSGLQNRVTG 100 (267)
T ss_dssp HHHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTTC----SSEEEEEESCHHHHHHHHHHH----HHTTCTTTEEE
T ss_pred HHHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhcc----CCEEEEEeCCHHHHHHHHHHH----HHcCCCcCcEE
Confidence 3344555554 234568999999887 4556677662 468999999998887776654 445664 555
Q ss_pred EEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEE-Eeee
Q 005954 458 HPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVL-MAEQ 520 (667)
Q Consensus 458 ~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVV-lvEq 520 (667)
. ...++++. ...+..=+|-|...+|++ + ...+|+.+ +-|+|.-++ +.+.
T Consensus 101 ~--~~d~~~~~-----~~~~~fD~i~~~~~~~~~--~-----~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 101 I--VGSMDDLP-----FRNEELDLIWSEGAIYNI--G-----FERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp E--ECCTTSCC-----CCTTCEEEEEESSCGGGT--C-----HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred E--EcChhhCC-----CCCCCEEEEEEcCCceec--C-----HHHHHHHHHHHcCCCCEEEEEEe
Confidence 3 22333332 223333344455566775 2 35566555 579998444 4444
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.14 E-value=0.38 Score=47.08 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=61.5
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEecccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLW 470 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~ 470 (667)
.+.-+|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++. ..+++ .+|. ...++++
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~--~~d~~~~--- 99 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPESLEKARENTE----KNGIKNVKFL--QANIFSL--- 99 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHH----HTTCCSEEEE--ECCGGGC---
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEE--EcccccC---
Confidence 345689999999984 344455442 23689999999888877666543 34553 4443 2222222
Q ss_pred ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEE-EEeeec
Q 005954 471 MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIV-LMAEQE 521 (667)
Q Consensus 471 ~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVV-VlvEqE 521 (667)
...++..=+|-+...||++ . ....+|+.+ +-|+|.-+ ++++.+
T Consensus 100 --~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 100 --PFEDSSFDHIFVCFVLEHL-Q-----SPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp --CSCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CCCCCCeeEEEEechhhhc-C-----CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 2223333345555567775 2 235666665 56999844 444443
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.98 E-value=0.53 Score=48.56 Aligned_cols=116 Identities=9% Similarity=-0.016 Sum_probs=68.6
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEE
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHP 459 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~ 459 (667)
.+.|++.+.-.+.-+|+|+|.+.|.-- ..|+.+- |.+++|+|+. ...++.+.+++. ..|++ ++|..
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~ 246 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDIS----AAMLKHF---PELDSTILNL-PGAIDLVNENAA----EKGVADRMRGIA 246 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHH----HHHHHHC---TTCEEEEEEC-GGGHHHHHHHHH----HTTCTTTEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHH----HHHHHHC---CCCeEEEEec-HHHHHHHHHHHH----hcCCCCCEEEEe
Confidence 356777776566779999999999743 3444332 3579999998 777777666554 33443 55532
Q ss_pred eccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCc-EEEEeeecC
Q 005954 460 VVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPT-IVLMAEQEA 522 (667)
Q Consensus 460 V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~Pk-VVVlvEqEa 522 (667)
- .+.+. .+..+++++.+ ..||++. | .....+|+.++ .|+|. .++++|.-.
T Consensus 247 ~--d~~~~-----~~~~~D~v~~~--~vlh~~~-d---~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 247 V--DIYKE-----SYPEADAVLFC--RILYSAN-E---QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp C--CTTTS-----CCCCCSEEEEE--SCGGGSC-H---HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred C--ccccC-----CCCCCCEEEEe--chhccCC-H---HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2 22211 12233555544 3466642 2 23566777764 58997 455667543
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.78 E-value=0.39 Score=44.72 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=57.0
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++...++. -..+|. ...++++ .
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~--------~~~~~~--~~d~~~~-----~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL-G----HQIEGLEPATRLVELARQTH--------PSVTFH--HGTITDL-----S 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT-T----CCEEEECCCHHHHHHHHHHC--------TTSEEE--CCCGGGG-----G
T ss_pred CCeEEEecCCCCH----HHHHHHhc-C----CeEEEEeCCHHHHHHHHHhC--------CCCeEE--eCccccc-----c
Confidence 4579999999986 55566665 2 38999999988776665541 123332 2233332 2
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...+..=+|-|...|||+.. .....+|+.+ +-|+|.-.+++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMGP----GELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp GSCCCEEEEEEESSSTTCCT----TTHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcCCH----HHHHHHHHHHHHHcCCCcEEEE
Confidence 22333334445556777532 2356667665 56899854444
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.74 E-value=0.84 Score=46.06 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=69.4
Q ss_pred HHHHHhhCC--CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 383 EMLLRAFDG--KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 383 qAILEA~eG--~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
..|++.+.- .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++...+++.+ .|++ ++|.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~~~~a~~~~~~----~~~~~~v~~~ 220 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-SVLEVAKENARI----QGVASRYHTI 220 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-HHHHHHHHHHHH----HTCGGGEEEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-HHHHHHHHHHHh----cCCCcceEEE
Confidence 467777765 667899999999995 444444442 34799999998 877777766543 3443 5554
Q ss_pred EeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeecCC
Q 005954 459 PVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQEAE 523 (667)
Q Consensus 459 ~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqEad 523 (667)
.. .+.+. .+..+ .=+|-|..-||++- + .....+|+.+ +.|+|.- ++++|....
T Consensus 221 ~~--d~~~~-----~~~~~-~D~v~~~~~l~~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 221 AG--SAFEV-----DYGND-YDLVLLPNFLHHFD-V---ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp ES--CTTTS-----CCCSC-EEEEEEESCGGGSC-H---HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ec--ccccC-----CCCCC-CcEEEEcchhccCC-H---HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 22 22211 11122 32334445677652 1 2345677666 5689985 666665543
No 17
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.54 E-value=0.86 Score=47.52 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=66.7
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V 460 (667)
..|++.+.-.+..+|+|+|.+.|. +...|+.+- |.+++|+++. ...++...+++.+ .|+ ..+|...
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~----~~l~~~v~~~~~ 259 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLER-PPVAEEARELLTG----RGLADRCEILPG 259 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHHH----TTCTTTEEEEEC
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcC-HHHHHHHHHhhhh----cCcCCceEEecc
Confidence 456777665667899999999996 444455442 3579999998 7777766665543 343 2555432
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCc-EEEEeeecCC
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPT-IVLMAEQEAE 523 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~Pk-VVVlvEqEad 523 (667)
- -.+.+ .. .-++++.+ .-||+. .| .....+|+.++ .|+|. .++++|.-..
T Consensus 260 d-~~~~~-----p~-~~D~v~~~--~vlh~~-~d---~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 260 D-FFETI-----PD-GADVYLIK--HVLHDW-DD---DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp C-TTTCC-----CS-SCSEEEEE--SCGGGS-CH---HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred C-CCCCC-----CC-CceEEEhh--hhhccC-CH---HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1 01111 11 22344333 345664 22 22346777775 68997 5556665443
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=93.46 E-value=0.87 Score=42.74 Aligned_cols=109 Identities=12% Similarity=0.179 Sum_probs=61.6
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
..+++.+.....-.|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+++. -++.|. ..
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~----~~ 96 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-----GRTVYGIEPSREMRMIAKEKLP-----KEFSIT----EG 96 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-----TCEEEEECSCHHHHHHHHHHSC-----TTCCEE----SC
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-----CCeEEEEeCCHHHHHHHHHhCC-----CceEEE----eC
Confidence 456666655566789999999985 55556665 2589999999887766655433 233322 22
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEee
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAE 519 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvE 519 (667)
.++++.. . ..=+.|+.+ ..||++. +. ....+|+.+ +-|+|. ++++++
T Consensus 97 d~~~~~~---~-~~fD~v~~~--~~l~~~~-~~---~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 97 DFLSFEV---P-TSIDTIVST--YAFHHLT-DD---EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CSSSCCC---C-SCCSEEEEE--SCGGGSC-HH---HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChhhcCC---C-CCeEEEEEC--cchhcCC-hH---HHHHHHHHHHHhcCCCCEEEEEe
Confidence 2332221 1 222344433 4567752 21 122356555 678998 444444
No 19
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=93.35 E-value=1.7 Score=41.79 Aligned_cols=118 Identities=13% Similarity=0.019 Sum_probs=66.8
Q ss_pred hhhhhhHHHHHhhCC-CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-
Q 005954 377 IHFTANEMLLRAFDG-KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP- 454 (667)
Q Consensus 377 AhftANqAILEA~eG-~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp- 454 (667)
.+......+++.+.+ ...-+|+|+|.|.|..- ..|+.+.+ . ++|||+.+...++.+.+++ +..|++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~----~~l~~~~~---~-~v~~vD~s~~~~~~a~~~~----~~~~~~~ 96 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQT----LFLADYVK---G-QITGIDLFPDFIEIFNENA----VKANCAD 96 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHH----HHHHHHCC---S-EEEEEESCHHHHHHHHHHH----HHTTCTT
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHH----HHHHHhCC---C-eEEEEECCHHHHHHHHHHH----HHcCCCC
Confidence 333344445565533 33458999999998643 33444321 2 8999999988887766654 455665
Q ss_pred -eEEEEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEE-EEeee
Q 005954 455 -FEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIV-LMAEQ 520 (667)
Q Consensus 455 -FEF~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVV-VlvEq 520 (667)
.+|. ...++++. ..++..=+|-|...||++ + ...+|+.+ +-|+|.-. ++++.
T Consensus 97 ~~~~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~--~-----~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 97 RVKGI--TGSMDNLP-----FQNEELDLIWSEGAIYNI--G-----FERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TEEEE--ECCTTSCS-----SCTTCEEEEEEESCSCCC--C-----HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ceEEE--ECChhhCC-----CCCCCEEEEEecChHhhc--C-----HHHHHHHHHHHcCCCcEEEEEEe
Confidence 5553 22333332 223333344444556765 2 35667666 45999844 44443
No 20
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.22 E-value=1.4 Score=45.38 Aligned_cols=112 Identities=18% Similarity=0.163 Sum_probs=66.1
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
..|++.+.-.+..+|+|+|.+.| .+...|+.+- |.+++|+|+. ...++.+.+++. ..|+. .+|...
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~ 239 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-AGPAERARRRFA----DAGLADRVTVAEG 239 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-HHHHHHHHHHHH----hcCCCCceEEEeC
Confidence 56777765556679999999999 3444555442 3579999998 777777666553 34543 555422
Q ss_pred cccc-ccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeee
Q 005954 461 VDRL-EDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQ 520 (667)
Q Consensus 461 ~~~l-E~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEq 520 (667)
.+ +.+ +...=+|-+...||++- + .....+|+.+ +.|+|.- ++++|.
T Consensus 240 --d~~~~~--------~~~~D~v~~~~vl~~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 240 --DFFKPL--------PVTADVVLLSFVLLNWS-D---EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp --CTTSCC--------SCCEEEEEEESCGGGSC-H---HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --CCCCcC--------CCCCCEEEEeccccCCC-H---HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 11 111 11122344445567642 2 1234566666 5689985 566676
No 21
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=93.11 E-value=0.53 Score=44.52 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=55.1
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHV 474 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i 474 (667)
-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.. .++|. ...++++ .
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~~-------~v~~~--~~d~~~~------~ 99 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEEAISHAQGRLKD-------GITYI--HSRFEDA------Q 99 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHHHHHHHHHHSCS-------CEEEE--ESCGGGC------C
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHHHHHHHHHhhhC-------CeEEE--EccHHHc------C
Confidence 369999999885 45566654 22 699999998877666655432 33332 2233322 1
Q ss_pred CCCcEEEEEeccchhhcccCCCCChHHHHHHHHH--hcCCcEEEEe
Q 005954 475 KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR--STNPTIVLMA 518 (667)
Q Consensus 475 ~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR--sL~PkVVVlv 518 (667)
.++..=+|-|...|||+ . ....+|+.++ -|+|.-.+++
T Consensus 100 ~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLEHI-D-----DPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp CSSCEEEEEEESCGGGC-S-----SHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCcccEEEEhhHHHhh-c-----CHHHHHHHHHHHhcCCCCEEEE
Confidence 12222244455567875 2 2356777776 6899744443
No 22
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=92.95 E-value=0.62 Score=47.42 Aligned_cols=113 Identities=13% Similarity=0.076 Sum_probs=63.3
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEecc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPVVD 462 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V~~ 462 (667)
|++.+.-.+..+|+|+|.+.| .+...|+.+- |.+++|+++. ...++...+++.+ .++ ..+|...-
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~----~~~~~~v~~~~~d- 227 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDL-QGPASAAHRRFLD----TGLSGRAQVVVGS- 227 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHHH----TTCTTTEEEEECC-
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecC-HHHHHHHHHhhhh----cCcCcCeEEecCC-
Confidence 344444345679999999999 4444555432 3579999988 7777766665543 344 25554321
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecC
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEA 522 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEa 522 (667)
-.+.+ .. .-++++ |..-||++- | .....+|+.+ +.|+|. .++++|.-.
T Consensus 228 ~~~~~-----p~-~~D~v~--~~~vlh~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 228 FFDPL-----PA-GAGGYV--LSAVLHDWD-D---LSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp TTSCC-----CC-SCSEEE--EESCGGGSC-H---HHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CCCCC-----CC-CCcEEE--EehhhccCC-H---HHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 11111 11 223333 344567752 2 2245677766 568997 455556543
No 23
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=92.85 E-value=2.1 Score=42.20 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=63.7
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVD 462 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~ 462 (667)
+++.+... ..+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..|++ .+|. ..
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~--~~ 124 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLSAQMIDRAKQAAE----AKGVSDNMQFI--HC 124 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHH----C-CCGGGEEEE--ES
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECCHHHHHHHHHHHH----hcCCCcceEEE--Ec
Confidence 44444433 5789999999984 55666665 2 489999999888877766654 34553 4443 32
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.++++.. ..++..=+|-|...||++ . ....+|+.+ +-|+|.-++++.
T Consensus 125 d~~~~~~----~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 125 AAQDVAS----HLETPVDLILFHAVLEWV-A-----DPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp CGGGTGG----GCSSCEEEEEEESCGGGC-S-----CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHhhh----hcCCCceEEEECchhhcc-c-----CHHHHHHHHHHHcCCCeEEEEE
Confidence 3333321 122323344445567775 2 235566655 579998555543
No 24
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.71 E-value=0.4 Score=56.77 Aligned_cols=124 Identities=17% Similarity=0.215 Sum_probs=75.1
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH--HHHcCCceEEEEecc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF--AEALNLPFEFHPVVD 462 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f--A~slgVpFEF~~V~~ 462 (667)
|++.+.....-.|+|+|.|.| .+...|+.+. ++.-+||||+.+...++.+.++|... ++..|++ ....+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG----~lai~LAr~g--~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqG 785 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSG----SLLDSLLDYP--TSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDG 785 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSS----HHHHHHTSSC--CCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEES
T ss_pred HHHHhcccCCCEEEEECCCCC----HHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEEC
Confidence 444444334557999999999 4566666653 34569999999999999988888765 2234554 2222333
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHH-HHhcCCcEEEEeeecCCC
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGL-IRSTNPTIVLMAEQEAEH 524 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~-IRsL~PkVVVlvEqEadh 524 (667)
.++++.. ..+..=+|-|...|||+. + .....+|+. .+-|+|.++++...+.++
T Consensus 786 Da~dLp~-----~d~sFDlVV~~eVLeHL~-d---p~l~~~L~eI~RvLKPG~LIISTPN~ey 839 (950)
T 3htx_A 786 SILEFDS-----RLHDVDIGTCLEVIEHME-E---DQACEFGEKVLSLFHPKLLIVSTPNYEF 839 (950)
T ss_dssp CTTSCCT-----TSCSCCEEEEESCGGGSC-H---HHHHHHHHHHHHTTCCSEEEEEECBGGG
T ss_pred chHhCCc-----ccCCeeEEEEeCchhhCC-h---HHHHHHHHHHHHHcCCCEEEEEecCchh
Confidence 3443322 222222333455677763 2 123456655 578999988887776543
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=92.64 E-value=1.5 Score=42.57 Aligned_cols=114 Identities=23% Similarity=0.257 Sum_probs=65.2
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
..|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|.
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~-- 116 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISISRPQVNQANARA----TAAGLANRVTFS-- 116 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE--
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCCHHHHHHHHHHH----HhcCCCcceEEE--
Confidence 4455666545566999999988863 334444322 58999999988887666554 344553 4543
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeec
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQE 521 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqE 521 (667)
...++++ ...++..=+|-+...|||+ . ....+|+.+ +-|+|.- +++.+..
T Consensus 117 ~~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 117 YADAMDL-----PFEDASFDAVWALESLHHM-P-----DRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ECCTTSC-----CSCTTCEEEEEEESCTTTS-S-----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ECccccC-----CCCCCCccEEEEechhhhC-C-----CHHHHHHHHHHHcCCCeEEEEEEee
Confidence 2222222 2222323234445556775 2 235677666 4589984 4444543
No 26
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.57 E-value=1.2 Score=41.72 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=58.3
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ ++.|.. ..++++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~-------~~~~~~----~d~~~~~----- 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGSPELAAEASRRL-------GRPVRT----MLFHQLD----- 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHH-------TSCCEE----CCGGGCC-----
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCCHHHHHHHHHhc-------CCceEE----eeeccCC-----
Confidence 4579999999886 55566655 1 48999999988887776665 444432 1222221
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..+..=+|-|...||++.. ..+..+|+.+ +-|+|.-++++.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPR----DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCcEEEEEecCchhhcCH----HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1222224445566777531 2355667666 568998666554
No 27
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.35 E-value=1.1 Score=45.85 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=65.6
Q ss_pred HHHHhhCCCC-eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 384 MLLRAFDGKD-RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 384 AILEA~eG~~-~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
.|++.+.-.+ ..+|+|+|.+.|. +...|+.+- |.+++|+++. ...++...+++. ..++. ++|..-
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~ 236 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDL-PTTRDAARKTIH----AHDLGGRVEFFEK 236 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-GGGHHHHHHHHH----HTTCGGGEEEEEC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEEC-HHHHHHHHHHHH----hcCCCCceEEEeC
Confidence 5777765444 7899999999996 444454432 3489999988 555655555443 34542 555322
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeecC
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQEA 522 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqEa 522 (667)
.+.+... + . ++.+=+|-+..-||++- + .....+|+.+ +.|+|.- ++++|.-.
T Consensus 237 --d~~~~~~--~-~-~~~~D~v~~~~vlh~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 237 --NLLDARN--F-E-GGAADVVMLNDCLHYFD-A---REAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp --CTTCGGG--G-T-TCCEEEEEEESCGGGSC-H---HHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred --CcccCcc--c-C-CCCccEEEEecccccCC-H---HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2211110 0 1 22233444555677752 2 2345677766 5689974 45556443
No 28
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=92.20 E-value=2.3 Score=42.20 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=61.3
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~ 471 (667)
.+...|+|+|.|.|. +...|+.+- |+..++|||+.+...++.+.+++. ..+..++|. ...++++.
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~~~~~a~~~~~----~~~~~v~~~--~~d~~~~~--- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGETLLAEARELFR----LLPYDSEFL--EGDATEIE--- 85 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHHHHHHHHHHHH----SSSSEEEEE--ESCTTTCC---
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHH----hcCCceEEE--EcchhhcC---
Confidence 456789999999983 455566553 223689999999887776665543 344444443 33333322
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEE-EEeeec
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIV-LMAEQE 521 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVV-VlvEqE 521 (667)
. ++..=+|-|...||++ . ....+|+.+ +-|+|.-. +++|.+
T Consensus 86 --~-~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 --L-NDKYDIAICHAFLLHM-T-----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp --C-SSCEEEEEEESCGGGC-S-----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --c-CCCeeEEEECChhhcC-C-----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 1 2222234444456765 2 235556554 67899844 445544
No 29
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.08 E-value=1.5 Score=45.98 Aligned_cols=117 Identities=12% Similarity=0.068 Sum_probs=66.5
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-C----CceEEEEeccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-N----LPFEFHPVVDRLEDV 467 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-g----VpFEF~~V~~~lE~l 467 (667)
+.-+|+|+|.|.|.-=..|.+.+. |..++|||+.+...++.+.+++...+..+ | -..+|.. ..++++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~--~d~~~l 154 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVG------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK--GFIENL 154 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHT------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE--SCTTCG
T ss_pred CCCEEEEecCccCHHHHHHHHHhC------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE--ccHHHh
Confidence 345899999999953333333331 13599999999999999988888777664 4 2455532 233332
Q ss_pred ccc-ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeecCC
Q 005954 468 RLW-MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQEAE 523 (667)
Q Consensus 468 ~~~-~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqEad 523 (667)
... ...+.++..=+|-+...||++ . ....+|+.+ +-|+|.- +++.+...+
T Consensus 155 ~~~~~~~~~~~~fD~V~~~~~l~~~-~-----d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 155 ATAEPEGVPDSSVDIVISNCVCNLS-T-----NKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp GGCBSCCCCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred hhcccCCCCCCCEEEEEEccchhcC-C-----CHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 100 002223322233344456664 2 245666665 6799984 444454433
No 30
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.81 E-value=0.93 Score=42.58 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=59.8
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC------ceEEEEeccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL------PFEFHPVVDRLEDV 467 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV------pFEF~~V~~~lE~l 467 (667)
.-.|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+++ +..++ .++|. ...++++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~~~~~--~~d~~~~ 95 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-----GYSVTGIDINSEAIRLAETAA----RSPGLNQKTGGKAEFK--VENASSL 95 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-----TCEEEEEESCHHHHHHHHHHT----TCCSCCSSSSCEEEEE--ECCTTSC
T ss_pred CCeEEEECCCCCH----HHHHHHhC-----CCeEEEEECCHHHHHHHHHHH----HhcCCccccCcceEEE--Eeccccc
Confidence 3479999999985 44455555 248999999988776655443 33454 23443 2222222
Q ss_pred cccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecCCC
Q 005954 468 RLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEAEH 524 (667)
Q Consensus 468 ~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEadh 524 (667)
....+..=+|-+...||++. +. .....+|+.+ +-|+|. ++++++...+.
T Consensus 96 -----~~~~~~~D~v~~~~~l~~~~-~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 96 -----SFHDSSFDFAVMQAFLTSVP-DP--KERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp -----CSCTTCEEEEEEESCGGGCC-CH--HHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred -----CCCCCceeEEEEcchhhcCC-CH--HHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 22223233444445667652 21 2234677666 568998 44455554433
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=91.71 E-value=1.4 Score=40.98 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=62.0
Q ss_pred hHHHHHhhCC-CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcC-CceEEEE
Q 005954 382 NEMLLRAFDG-KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALN-LPFEFHP 459 (667)
Q Consensus 382 NqAILEA~eG-~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slg-VpFEF~~ 459 (667)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+ .+ -..+|..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-----~~~v~~~D~s~~~~~~a~~--------~~~~~~~~~~ 96 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-----ADRVTALDGSAEMIAEAGR--------HGLDNVEFRQ 96 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-----SSEEEEEESCHHHHHHHGG--------GCCTTEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-----CCeEEEEeCCHHHHHHHHh--------cCCCCeEEEe
Confidence 4456666653 333499999999986 44444444 1489999998876655443 44 2344432
Q ss_pred eccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeec
Q 005954 460 VVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQE 521 (667)
Q Consensus 460 V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqE 521 (667)
..++++ ...+..=+|-|...||++. + ..+..+|+.+ +-|+|. ++++++..
T Consensus 97 --~d~~~~------~~~~~~D~v~~~~~l~~~~-~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 97 --QDLFDW------TPDRQWDAVFFAHWLAHVP-D---DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp --CCTTSC------CCSSCEEEEEEESCGGGSC-H---HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --cccccC------CCCCceeEEEEechhhcCC-H---HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 222222 1223222444556677752 1 1245666665 578997 44455544
No 32
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.69 E-value=0.66 Score=48.26 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=63.6
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEec
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPVV 461 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V~ 461 (667)
.+++.+.....-+|+|+|.|.|. +...|+.+- |.+++|+++. ...++.+.+++ +..|+ .++|..-
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~~- 236 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDL-PQQLEMMRKQT----AGLSGSERIHGHGA- 236 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEEC-HHHHHHHHHHH----TTCTTGGGEEEEEC-
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeC-HHHHHHHHHHH----HhcCcccceEEEEc-
Confidence 34555433455799999999996 344444432 3579999997 66666555543 34454 3555422
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecCC
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEAE 523 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEad 523 (667)
.+.+... .+. ..-++++.+ .-||++- + .....+|+.+ +.|+|. .++++|.-.+
T Consensus 237 -d~~~~~~-~~p-~~~D~v~~~--~vlh~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 237 -NLLDRDV-PFP-TGFDAVWMS--QFLDCFS-E---EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp -CCCSSSC-CCC-CCCSEEEEE--SCSTTSC-H---HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred -cccccCC-CCC-CCcCEEEEe--chhhhCC-H---HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 1111100 011 122444443 3466642 2 2345677776 569997 4556665443
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=91.49 E-value=0.65 Score=44.54 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=64.0
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
..+++.+.....-+|+|+|.|.|.--..|.+.. ..++|+|+.+...++.+.+++... -..+|. ..
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~--~~ 147 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVKHMLEEAKRELAGM-----PVGKFI--LA 147 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEE--ES
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCHHHHHHHHHHhccC-----CceEEE--Ec
Confidence 456666655566799999999987333333332 247999999988877766654332 223332 22
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.++++ ...++..=+|-|...||++.. ..+..+|+.+ +-|+|.-+++..
T Consensus 148 d~~~~-----~~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 148 SMETA-----TLPPNTYDLIVIQWTAIYLTD----ADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp CGGGC-----CCCSSCEEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cHHHC-----CCCCCCeEEEEEcchhhhCCH----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 23322 222232223344556777521 1345566555 678998554443
No 34
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=91.31 E-value=0.62 Score=48.97 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=63.9
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.|++.+.-...-.|+|+|.+.|. ++..|+.+ + .++|||+.+...++. |+..|++..-..+.
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~~~~~--------a~~~~~~~~~~~~~-- 158 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSGVAAK--------AREKGIRVRTDFFE-- 158 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHHHHHH--------HHTTTCCEECSCCS--
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHHHHHH--------HHHcCCCcceeeec--
Confidence 45555554556789999999998 55566654 2 389999998876644 44446665421111
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.-....+...++..=+|-+...|||+- .+..+|+.+ +-|+|.-+++.+
T Consensus 159 --~~~~~~l~~~~~~fD~I~~~~vl~h~~------d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 159 --KATADDVRRTEGPANVIYAANTLCHIP------YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp --HHHHHHHHHHHCCEEEEEEESCGGGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred --hhhHhhcccCCCCEEEEEECChHHhcC------CHHHHHHHHHHHcCCCeEEEEE
Confidence 111111122223333444556678862 356777776 568998666665
No 35
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=90.91 E-value=2.7 Score=42.27 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=63.5
Q ss_pred HHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEE
Q 005954 383 EMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHP 459 (667)
Q Consensus 383 qAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~ 459 (667)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~- 172 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSAAQADFGNRRA----RELRIDDHVRSR- 172 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE-
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCHHHHHHHHHHH----HHcCCCCceEEE-
Confidence 34666665 3445689999999884 3344444322 58999999988887766654 445655 5553
Q ss_pred eccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEE
Q 005954 460 VVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLM 517 (667)
Q Consensus 460 V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVl 517 (667)
...++++. ...+..=+|-|...||++ + ...+|+.+ +-|+|.-.++
T Consensus 173 -~~d~~~~~-----~~~~~fD~V~~~~~l~~~--~-----~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 173 -VCNMLDTP-----FDKGAVTASWNNESTMYV--D-----LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp -ECCTTSCC-----CCTTCEEEEEEESCGGGS--C-----HHHHHHHHHHHEEEEEEEE
T ss_pred -ECChhcCC-----CCCCCEeEEEECCchhhC--C-----HHHHHHHHHHHcCCCcEEE
Confidence 22333322 222322233344556764 2 45666655 6799984443
No 36
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=90.63 E-value=1.8 Score=41.03 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=56.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++. .+...+|.. ..++++ .
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~------~~~~~~~~~--~d~~~~-----~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDISEVMIQKGKERG------EGPDLSFIK--GDLSSL-----P 111 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHTTT------CBTTEEEEE--CBTTBC-----S
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHhhc------ccCCceEEE--cchhcC-----C
Confidence 3489999999985 45556655 2 38999999887776655442 122344432 222222 2
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
...+..=+|-|...|||+ . ....+|+.+ +-|+|.-++++.
T Consensus 112 ~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWT-E-----EPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp SCTTCEEEEEEESCTTSS-S-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCccEEEEcChHhhc-c-----CHHHHHHHHHHHhCCCeEEEEE
Confidence 223333345555667775 2 234556554 678998554443
No 37
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=89.95 E-value=2.2 Score=41.02 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=66.4
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
-+.|++.+...+.-.|+|+|.|.|. +...|+.+. +. ++|||+.+...++.+.+++. +...+|..
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~~--~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~-- 96 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEHG--AK--KVLGIDLSERMLTEAKRKTT------SPVVCYEQ-- 96 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHTT--CS--EEEEEESCHHHHHHHHHHCC------CTTEEEEE--
T ss_pred HHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHcC--CC--EEEEEECCHHHHHHHHHhhc------cCCeEEEE--
Confidence 3456666665567789999999984 555566552 22 89999999887776665543 23344432
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..++++ ....+..=+|-|...||++ . ....+|+.+ +-|+|.-++++.
T Consensus 97 ~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 97 KAIEDI-----AIEPDAYNVVLSSLALHYI-A-----SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CCGGGC-----CCCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhC-----CCCCCCeEEEEEchhhhhh-h-----hHHHHHHHHHHHcCCCcEEEEE
Confidence 222222 2223333344455567775 2 246677666 569998666654
No 38
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=89.71 E-value=0.46 Score=44.35 Aligned_cols=54 Identities=17% Similarity=0.401 Sum_probs=39.2
Q ss_pred hhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHH
Q 005954 381 ANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDR 443 (667)
Q Consensus 381 ANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~R 443 (667)
..+.|++.+.....-+|+|+|.|.| .+...|+.+ + .++|||+.+...++.+.++
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G----~~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEG----WLLRALADR-G----IEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTC----HHHHHHHTT-T----CEEEEEESCHHHHHHHHHT
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCC----HHHHHHHHC-C----CEEEEEcCCHHHHHHHHHh
Confidence 4456777776555589999999998 355667766 2 3899999998777665544
No 39
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=89.60 E-value=3.2 Score=40.77 Aligned_cols=107 Identities=19% Similarity=0.192 Sum_probs=61.5
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
+.+++.+.-...-.|+|+|.|.|.-.. .|+. + ..++|||+.+...++...+++ -++.|.- .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s~~~~~~a~~~~------~~~~~~~----~ 107 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNAATMIEKARQNY------PHLHFDV----A 107 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESCHHHHHHHHHHC------TTSCEEE----C
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECCHHHHHHHHhhC------CCCEEEE----C
Confidence 345666655555689999999986443 3343 2 258999999988777665543 2344331 1
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
.++++. . ++..=+|-+...||++ . ....+|+.+ +-|+|.-.+++..
T Consensus 108 d~~~~~-----~-~~~fD~v~~~~~l~~~-~-----d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 108 DARNFR-----V-DKPLDAVFSNAMLHWV-K-----EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp CTTTCC-----C-SSCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhCC-----c-CCCcCEEEEcchhhhC-c-----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 222221 1 2222233445567775 2 235566554 6789986555543
No 40
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=89.54 E-value=2.3 Score=40.80 Aligned_cols=107 Identities=17% Similarity=0.088 Sum_probs=60.9
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.+++.+.....-+|+|+|.|.|.--..|.+.+ + ..++|+|+.+...++...+++ -+ ++|. ...
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~----~~~v~~~D~s~~~~~~a~~~~------~~--~~~~--~~d 86 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY---G----VNVITGIDSDDDMLEKAADRL------PN--TNFG--KAD 86 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH---C----TTSEEEEESCHHHHHHHHHHS------TT--SEEE--ECC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC---C----CCEEEEEECCHHHHHHHHHhC------CC--cEEE--ECC
Confidence 35555544455689999999997655555554 1 247999999988776665541 12 3332 222
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
++++. .++..=+|-|...||++ . ....+|+.+ +-|+|.-.+++.
T Consensus 87 ~~~~~------~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 87 LATWK------PAQKADLLYANAVFQWV-P-----DHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp TTTCC------CSSCEEEEEEESCGGGS-T-----THHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhcC------ccCCcCEEEEeCchhhC-C-----CHHHHHHHHHHhcCCCeEEEEE
Confidence 22221 12222233445567775 2 245666665 679998544443
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=89.52 E-value=0.6 Score=44.06 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=69.2
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC------ceE
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL------PFE 456 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV------pFE 456 (667)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. +..++|||+.+...++.+.+++.. .++ .++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~~~v~ 87 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYSVLERAKDRLKI----DRLPEMQRKRIS 87 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHHHHHHHHHHHTG----GGSCHHHHTTEE
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHh----hccccccCcceE
Confidence 344455543445589999999986 556666643 247999999999888877776532 222 244
Q ss_pred EEEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeecCCC
Q 005954 457 FHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQEAEH 524 (667)
Q Consensus 457 F~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqEadh 524 (667)
|.. ..++.+.. ....=++|+ |...||++ .+ ..+..+|+.+ +-|+|.-++++..+..+
T Consensus 88 ~~~--~d~~~~~~---~~~~fD~V~--~~~~l~~~-~~---~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 145 (219)
T 3jwg_A 88 LFQ--SSLVYRDK---RFSGYDAAT--VIEVIEHL-DE---NRLQAFEKVLFEFTRPQTVIVSTPNKEY 145 (219)
T ss_dssp EEE--CCSSSCCG---GGTTCSEEE--EESCGGGC-CH---HHHHHHHHHHHTTTCCSEEEEEEEBGGG
T ss_pred EEe--Cccccccc---ccCCCCEEE--EHHHHHhC-CH---HHHHHHHHHHHHhhCCCEEEEEccchhh
Confidence 432 22222211 111113333 44556775 21 2345677666 56899987777666444
No 42
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=89.42 E-value=3.5 Score=38.36 Aligned_cols=106 Identities=16% Similarity=0.234 Sum_probs=59.4
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
...|++.+. .+.-+|+|+|.+.| .+...|+.+ + .++|+|+.+...++.+.+++ . +| +.
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~~~~~~~~~~~~--------~--~~--~~ 79 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAFPEAAEQAKEKL--------D--HV--VL 79 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESSHHHHHHHHTTS--------S--EE--EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCCHHHHHHHHHhC--------C--cE--EE
Confidence 355666665 45678999999988 455667766 2 58999999887665444332 2 22 22
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
..+++.. +...++..=+|-+...|||+ . ....+|+.+ +-|+|.-.++.
T Consensus 80 ~d~~~~~---~~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 80 GDIETMD---MPYEEEQFDCVIFGDVLEHL-F-----DPWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp SCTTTCC---CCSCTTCEEEEEEESCGGGS-S-----CHHHHHHHTGGGEEEEEEEEE
T ss_pred cchhhcC---CCCCCCccCEEEECChhhhc-C-----CHHHHHHHHHHHcCCCCEEEE
Confidence 2222211 12222322223344456664 2 235677666 55899844444
No 43
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=89.39 E-value=3.9 Score=41.84 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=64.4
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V 460 (667)
+.|++.+.-.+..+|+|+|.+.|.-- ..|+.+. |.+++|+++. ...++.+.+++. ..|+ .++|..-
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~ 240 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFA----AAIARRA---PHVSATVLEM-AGTVDTARSYLK----DEGLSDRVDVVEG 240 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHH----HHHHHHC---TTCEEEEEEC-TTHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHH----HHHHHhC---CCCEEEEecC-HHHHHHHHHHHH----hcCCCCceEEEeC
Confidence 55677766556679999999999533 4444332 3579999997 666666665543 3455 3555432
Q ss_pred cccc-ccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeec
Q 005954 461 VDRL-EDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQE 521 (667)
Q Consensus 461 ~~~l-E~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqE 521 (667)
.+ +.+ ++..=+|-+..-||++- + .....+|+.+ +.|+|.- ++++|..
T Consensus 241 --d~~~~~--------~~~~D~v~~~~vl~~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 241 --DFFEPL--------PRKADAIILSFVLLNWP-D---HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp --CTTSCC--------SSCEEEEEEESCGGGSC-H---HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCCCCC--------CCCccEEEEcccccCCC-H---HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 11 111 11122333444567642 2 1234567666 5689985 5556654
No 44
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=88.94 E-value=2.6 Score=43.05 Aligned_cols=107 Identities=10% Similarity=0.158 Sum_probs=62.8
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-------ceEEEEec--cc-
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-------PFEFHPVV--DR- 463 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-------pFEF~~V~--~~- 463 (667)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+...++.+.++..+ .++ .++|.... ..
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDADAIARGNERYNK----LNSGIKTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHHHHHHHHHHHHH----HCC----CCCEEEEEECCTTSSS
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHHHHHHHHHHHHh----ccccccccccccchhhhhcccch
Confidence 46899999999852 222333221 3799999999999888876543 232 24554321 11
Q ss_pred c-ccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 464 L-EDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 464 l-E~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
+ +++.. ....+..=+|.|++.||++...+ .+..+|+.+ +-|+|.-++++
T Consensus 117 ~~~~l~~---~~~~~~FD~V~~~~~lhy~~~~~---~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 117 FVSSVRE---VFYFGKFNIIDWQFAIHYSFHPR---HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp HHHHHHT---TCCSSCEEEEEEESCGGGTCSTT---THHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhc---cccCCCeeEEEECchHHHhCCHH---HHHHHHHHHHHHcCCCCEEEE
Confidence 0 11110 11233344777888998865433 346677666 67999955544
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=88.94 E-value=2.1 Score=40.29 Aligned_cols=116 Identities=20% Similarity=0.273 Sum_probs=66.4
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc------eEE
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP------FEF 457 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp------FEF 457 (667)
.|++.+...+.-.|+|+|.+.|. +...|+.+. +..++|||+.+...++.+.+++. ..+++ ++|
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~~~v~~ 88 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYRSLEIAQERLD----RLRLPRNQWERLQL 88 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHHHHHHHHHHHT----TCCCCHHHHTTEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHHHHHHHHHHHH----HhcCCcccCcceEE
Confidence 34444433344589999999986 455566543 23599999999988877776643 33332 444
Q ss_pred EEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCcEEEEeeec
Q 005954 458 HPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPTIVLMAEQE 521 (667)
Q Consensus 458 ~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~PkVVVlvEqE 521 (667)
.. ..++.... ....=++|+ |...||++ .+ ..+..+|+.++ -|+|.-++++..+
T Consensus 89 ~~--~d~~~~~~---~~~~fD~v~--~~~~l~~~-~~---~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 89 IQ--GALTYQDK---RFHGYDAAT--VIEVIEHL-DL---SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EE--CCTTSCCG---GGCSCSEEE--EESCGGGC-CH---HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred Ee--CCcccccc---cCCCcCEEe--eHHHHHcC-CH---HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 32 22222211 111123344 44456775 21 23456777664 5899987776654
No 46
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=88.33 E-value=8.1 Score=38.62 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=63.5
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEec
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVV 461 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~ 461 (667)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++...+++. ..|+. .+|. .
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~--~ 146 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSKNQHARCEQVLA----SIDTNRSRQVL--L 146 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHHH----TSCCSSCEEEE--E
T ss_pred HHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCHHHHHHHHHHHH----hcCCCCceEEE--E
Confidence 45555554555689999998875 3344444322 389999999888877666543 34553 4443 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeec
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQE 521 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqE 521 (667)
..++++. ..=++|+.+ ..|||+.. .....+|+.+ +-|+|. .+++.+..
T Consensus 147 ~d~~~~~------~~fD~v~~~--~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 147 QGWEDFA------EPVDRIVSI--EAFEHFGH----ENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp SCGGGCC------CCCSEEEEE--SCGGGTCG----GGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CChHHCC------CCcCEEEEe--ChHHhcCH----HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 2333331 112333333 44666521 2355666665 669998 44444444
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=88.31 E-value=4 Score=40.69 Aligned_cols=113 Identities=11% Similarity=0.139 Sum_probs=65.6
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++. ..|++ .+| +
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~--~ 127 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSENQYAHDKAMFD----EVDSPRRKEV--R 127 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCHHHHHHHHHHHH----HSCCSSCEEE--E
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCHHHHHHHHHHHH----hcCCCCceEE--E
Confidence 346666655566789999998775 4444444322 589999999988877776643 45665 444 3
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCC----CCChHHHHHHHH-HhcCCcEEEEe
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSG----NGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~de----s~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...++++ -..=+.|+.+ ..+||+. |. .......+|+.+ +-|+|.-.+++
T Consensus 128 ~~d~~~~------~~~fD~v~~~--~~~~~~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 128 IQGWEEF------DEPVDRIVSL--GAFEHFA-DGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp ECCGGGC------CCCCSEEEEE--SCGGGTT-CCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred ECCHHHc------CCCccEEEEc--chHHhcC-ccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 3333332 1112344433 4567753 32 223456677665 57999844333
No 48
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=88.25 E-value=3 Score=41.17 Aligned_cols=115 Identities=8% Similarity=0.043 Sum_probs=67.5
Q ss_pred HHHHHhh----CCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eE
Q 005954 383 EMLLRAF----DGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FE 456 (667)
Q Consensus 383 qAILEA~----eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FE 456 (667)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+.+...++.+.+++. ..|++ ++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~ 135 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPVQNKRNEEYNN----QAGLADNIT 135 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHHHHHHHHHHHH----HHTCTTTEE
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHHHHHHHHHHHH----hcCCCcceE
Confidence 3455555 33455689999999887555555443 1 389999999888877766654 33443 45
Q ss_pred EEEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecC
Q 005954 457 FHPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEA 522 (667)
Q Consensus 457 F~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEa 522 (667)
|. ...++++ ...++..=+|-+...|||+ . ....+|+.+ |-|+|. ++++++...
T Consensus 136 ~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 136 VK--YGSFLEI-----PCEDNSYDFIWSQDAFLHS-P-----DKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EE--ECCTTSC-----SSCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EE--EcCcccC-----CCCCCCEeEEEecchhhhc-C-----CHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 43 2223322 2223433345555667775 2 245666655 568998 455555443
No 49
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=88.05 E-value=2.5 Score=41.59 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=62.9
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEec
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVV 461 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~ 461 (667)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++. ..|+. .+|. .
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~~~~~~a~~~~~----~~~~~~~~~~~--~ 120 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSKNQANHVQQLVA----NSENLRSKRVL--L 120 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHHH----TCCCCSCEEEE--E
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCHHHHHHHHHHHH----hcCCCCCeEEE--E
Confidence 35555544555689999988876 4444553322 289999999888877766543 34443 3432 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeec
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQE 521 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqE 521 (667)
..++++. ..=+.|+ |...|||+.. .....+|+.+ +-|+|. ++++.+..
T Consensus 121 ~d~~~~~------~~fD~v~--~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 121 AGWEQFD------EPVDRIV--SIGAFEHFGH----ERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp SCGGGCC------CCCSEEE--EESCGGGTCT----TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CChhhCC------CCeeEEE--EeCchhhcCh----HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2333332 1113333 3345677532 2345666665 568998 44444443
No 50
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=88.01 E-value=9.9 Score=38.07 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=74.7
Q ss_pred HHHhcCCccchhhhhhhHHHHHh----hC-CCCeEEEEEccccC---CCChHHHHHHHhcCCCCCCeEEEeeeCCChHHH
Q 005954 366 LLNQATPIPKFIHFTANEMLLRA----FD-GKDRVHIIDFDIKQ---GLQWPSFFQSLASRPNPPSHVRITGIGESKQEL 437 (667)
Q Consensus 366 ~f~e~sPf~kFAhftANqAILEA----~e-G~~~VHIIDFgI~~---G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L 437 (667)
.+.++.|-+. .....|+.+++. +. ....-+|+|+|.|. |. +..+++... |..|||+|+.+...|
T Consensus 46 ~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~~------p~~~v~~vD~sp~~l 117 (274)
T 2qe6_A 46 YACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSVN------PDARVVYVDIDPMVL 117 (274)
T ss_dssp HHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHHC------TTCEEEEEESSHHHH
T ss_pred HHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHhC------CCCEEEEEECChHHH
Confidence 3444555432 123445555442 22 22334899999998 73 333333321 237999999998888
Q ss_pred HHHHHHHHHHHHHcCCceEEEEecccccccccc--c----cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHh-c
Q 005954 438 NETGDRLSGFAEALNLPFEFHPVVDRLEDVRLW--M----LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRS-T 510 (667)
Q Consensus 438 ~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~--~----L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRs-L 510 (667)
+...+++.. .-..+|. ...+.+.... . -.+..+...+|-+..-||++- ++ ....+|+.|++ |
T Consensus 118 ~~Ar~~~~~-----~~~v~~~--~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~-d~---~~~~~l~~~~~~L 186 (274)
T 2qe6_A 118 THGRALLAK-----DPNTAVF--TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLS-PD---VVDRVVGAYRDAL 186 (274)
T ss_dssp HHHHHHHTT-----CTTEEEE--ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSC-TT---THHHHHHHHHHHS
T ss_pred HHHHHhcCC-----CCCeEEE--EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCC-cH---HHHHHHHHHHHhC
Confidence 877776631 1124443 2223222100 0 012223456666777888863 32 35678877765 9
Q ss_pred CCc-EEEEeeecC
Q 005954 511 NPT-IVLMAEQEA 522 (667)
Q Consensus 511 ~Pk-VVVlvEqEa 522 (667)
+|. .+++.+...
T Consensus 187 ~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 187 APGSYLFMTSLVD 199 (274)
T ss_dssp CTTCEEEEEEEBC
T ss_pred CCCcEEEEEEecC
Confidence 997 555555544
No 51
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=86.94 E-value=2.8 Score=41.55 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=31.8
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
+.-.|+|+|.|.|. +..|+. .+. .-+||||+.+...++.+.+++.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~~---~~~----~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLSA---CSH----FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTTG---GGG----CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcCh-HHHHhh---ccC----CCeEEEeCCCHHHHHHHHHHHh
Confidence 44689999999998 543322 211 1389999999988887776653
No 52
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=86.84 E-value=3.5 Score=40.59 Aligned_cols=111 Identities=10% Similarity=0.005 Sum_probs=65.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
..+++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ +..|+..+|.. .
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~-g----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~--~ 174 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL-G----YDVTSWDHNENSIAFLNETK----EKENLNISTAL--Y 174 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHH----HHTTCCEEEEE--C
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHH----HHcCCceEEEE--e
Confidence 455565544456789999999996 45556665 2 48999999988887776654 34566555542 2
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
.++++. . .+..=+|-|...||++- + ..+..+|+.+ +-|+|.-++++
T Consensus 175 d~~~~~-----~-~~~fD~i~~~~~~~~~~-~---~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 175 DINAAN-----I-QENYDFIVSTVVFMFLN-R---ERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp CGGGCC-----C-CSCEEEEEECSSGGGSC-G---GGHHHHHHHHHHTEEEEEEEEE
T ss_pred cccccc-----c-cCCccEEEEccchhhCC-H---HHHHHHHHHHHHhcCCCcEEEE
Confidence 232221 1 22222333344567652 1 3456677666 56899865443
No 53
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=86.61 E-value=1.7 Score=45.29 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=58.9
Q ss_pred HHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 383 EMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 383 qAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
..|++.+. -...-+|+|+|-+.|.- ...|+.+- |.+++|+++. ...++.. +.. -..+|..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~~~~~a--------~~~-~~v~~~~-- 252 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAV----ASMIVAKY---PSINAINFDL-PHVIQDA--------PAF-SGVEHLG-- 252 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-HHHHTTC--------CCC-TTEEEEE--
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHH----HHHHHHhC---CCCEEEEEeh-HHHHHhh--------hhc-CCCEEEe--
Confidence 45666665 34567999999999964 44444432 3578999987 4333222 211 1234432
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecC
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEA 522 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEa 522 (667)
..+.+ . +..+++++.+. -||++- | .....+|+.+ +.|+|. .++++|.-.
T Consensus 253 ~d~~~----~--~p~~D~v~~~~--vlh~~~-~---~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 253 GDMFD----G--VPKGDAIFIKW--ICHDWS-D---EHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp CCTTT----C--CCCCSEEEEES--CGGGBC-H---HHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred cCCCC----C--CCCCCEEEEec--hhhcCC-H---HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 11111 1 11235554443 467652 2 2345677776 568998 466666543
No 54
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=85.76 E-value=1.4 Score=42.27 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=51.7
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++ ++|. ....++.. ..
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~-----------~~~~--~~d~~~~~---~~ 96 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINEDMIKFCEGK-----------FNVV--KSDAIEYL---KS 96 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHHHHHHHHTT-----------SEEE--CSCHHHHH---HT
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHHHHHHHHhh-----------ccee--eccHHHHh---hh
Confidence 3579999998885 34555554 2 3689999998777655543 3332 22222210 01
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
+.++..=+|-|...|||+- + ..+..+|+.+ +-|+|.-++++
T Consensus 97 ~~~~~fD~i~~~~~l~~~~-~---~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLD-P---ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp SCTTCBSEEEEESCGGGSC-G---GGHHHHHHHHHHHBCTTCCEEE
T ss_pred cCCCCeeEEEECCchhhCC-c---HHHHHHHHHHHHHcCCCcEEEE
Confidence 1222111233445567752 2 2356677665 67999743333
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=85.72 E-value=8.7 Score=34.94 Aligned_cols=113 Identities=14% Similarity=0.104 Sum_probs=65.0
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEe
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPV 460 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V 460 (667)
++.|++.+...+.-+|+|+|.+.|. +...|+.+ + .++|+|+.+...++.+.+++.. .++ ..+|.
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~-- 85 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAMSIANVERIKSI----ENLDNLHTR-- 85 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHH----HTCTTEEEE--
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHHh----CCCCCcEEE--
Confidence 4566776665455599999999886 44455555 2 4899999998888777665543 344 34443
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEE-EEee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIV-LMAE 519 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVV-VlvE 519 (667)
...++++. . ++..=+|-+...||++-. .....+|+.+ +-|+|.-. ++++
T Consensus 86 ~~d~~~~~-----~-~~~~D~v~~~~~l~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 86 VVDLNNLT-----F-DRQYDFILSTVVLMFLEA----KTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ECCGGGCC-----C-CCCEEEEEEESCGGGSCG----GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcchhhCC-----C-CCCceEEEEcchhhhCCH----HHHHHHHHHHHHhcCCCeEEEEEE
Confidence 22222221 1 222212333345666521 2456677665 56899855 4444
No 56
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=84.08 E-value=5.2 Score=40.14 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=62.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHH----cCCceEEEEecccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEA----LNLPFEFHPVVDRLEDVR 468 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~s----lgVpFEF~~V~~~lE~l~ 468 (667)
+.-+|+|+|.|.|.-- ..|+.++ ..++|+|+.+...++...+++...... ....++| +...++++.
T Consensus 34 ~~~~VLDlGcG~G~~~----~~l~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~D~~~~~ 103 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDL----LKWKKGR----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF--ITADSSKEL 103 (313)
T ss_dssp -CCEEEEETCTTTTTH----HHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE--EECCTTTSC
T ss_pred CCCEEEEECCCCcHHH----HHHHhcC----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE--EEecccccc
Confidence 4568999999998743 3344332 358999999999888887776543211 1112333 333333321
Q ss_pred c-cccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 469 L-WMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 469 ~-~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
. ..+.-.++..=+|-|.+.||++..+. .....+|+.+ +-|+|.-+++.
T Consensus 104 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~--~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 104 LIDKFRDPQMCFDICSCQFVCHYSFESY--EQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp STTTCSSTTCCEEEEEEETCGGGGGGSH--HHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhhcccCCCCEEEEEEecchhhccCCH--HHHHHHHHHHHHHhCCCcEEEE
Confidence 0 00111122222444556787753321 2345677776 56899855554
No 57
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=83.94 E-value=5.8 Score=35.54 Aligned_cols=101 Identities=11% Similarity=0.080 Sum_probs=58.1
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRL 464 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~l 464 (667)
+++.+.-.+.-.|+|+|.+.|. +...|+.+. . ++|||+.+...++.+.++ .-..+|. ...
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~~~~~a~~~--------~~~v~~~--~~d- 68 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVIALKEVKEK--------FDSVITL--SDP- 68 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHHHHHHHHHH--------CTTSEEE--SSG-
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHHHHHHHHHh--------CCCcEEE--eCC-
Confidence 4555555566789999999986 344555443 3 899999998877766665 1123332 111
Q ss_pred ccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 465 EDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 465 E~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
+....+..=+|-+...||++ . ....+|+.+ +.|+|.-.++.
T Consensus 69 -------~~~~~~~~D~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 69 -------KEIPDNSVDFILFANSFHDM-D-----DKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp -------GGSCTTCEEEEEEESCSTTC-S-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCCCceEEEEEccchhcc-c-----CHHHHHHHHHHhcCCCCEEEE
Confidence 22223323233344556765 2 245566555 67899744444
No 58
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=83.72 E-value=3.1 Score=42.79 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=31.3
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCC
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGES 433 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s 433 (667)
..|++.+.-.+.-+|+|+|.+.|.- ...|+.+- |.+++|+++.+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~ 217 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRA 217 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECH
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCH
Confidence 4677777656678999999999964 34444332 35899999874
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=83.69 E-value=1.9 Score=42.40 Aligned_cols=124 Identities=14% Similarity=0.058 Sum_probs=66.2
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcC-CceEEEEec
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALN-LPFEFHPVV 461 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slg-VpFEF~~V~ 461 (667)
+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+.....+ ..++|. .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~ 115 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--G---FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE--E 115 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE--E
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--C---CeEEEEECCHHHHHHHHHhhhhcccccccceeeEe--e
Confidence 344454444455689999999996 34445554 2 2899999999888877776533211111 123332 2
Q ss_pred cccccccccccccCCCcEEEEEec-cchhhccc-CCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCI-FQLHKTLY-SGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~-~~LH~lL~-des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..+.++.. .+ ...+..=+|-|. ..|||+.. ..+......+|+.+ +-|+|.-+++.+
T Consensus 116 ~d~~~~~~-~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 116 ANWLTLDK-DV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp CCGGGHHH-HS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cChhhCcc-cc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 22222221 11 223333344454 56777632 00112356677666 569998555544
No 60
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=83.50 E-value=5.8 Score=35.41 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=60.4
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEecc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVD 462 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~ 462 (667)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|+|+.+...++.+.+++. ..|+ ..+|. ..
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~~~~--~~ 90 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDGAIEVTKQNLA----KFNIKNCQII--KG 90 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHHHHHHHHHHHH----HTTCCSEEEE--ES
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHHHHHHHHHHHH----HcCCCcEEEE--EC
Confidence 34555544455689999999987 3444444 24689999999888877666543 4455 24442 22
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcE-EEEee
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTI-VLMAE 519 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkV-VVlvE 519 (667)
.+.+. +.-..=+.++.+.. .....+|+.++++ |.- ++++.
T Consensus 91 d~~~~----~~~~~~D~i~~~~~------------~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 91 RAEDV----LDKLEFNKAFIGGT------------KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp CHHHH----GGGCCCSEEEECSC------------SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred Ccccc----ccCCCCcEEEECCc------------ccHHHHHHHHhhC-CCCEEEEEe
Confidence 22221 11112244444433 1356789999888 874 44444
No 61
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=82.98 E-value=5.5 Score=38.12 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=63.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
..|++.+.-...-+|+|+|.|.|..-. .|+.+.+ .++|||+.+...++.+.+++ +..|+. .+|..
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~----~la~~~~----~~v~gvD~s~~~l~~a~~~~----~~~~~~~~v~~~~- 92 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLC----TWARDHG----ITGTGIDMSSLFTAQAKRRA----EELGVSERVHFIH- 92 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHH----HHHHHTC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEEE-
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHH----HHHHhcC----CeEEEEeCCHHHHHHHHHHH----HhcCCCcceEEEE-
Confidence 445555544455689999999987433 3443322 37899999998887766554 345654 56542
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEE-Eeee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVL-MAEQ 520 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVV-lvEq 520 (667)
..++++. . ++..=+|-|...+|++ .+ ...+|+.+ +-|+|.-.+ +++.
T Consensus 93 -~d~~~~~-----~-~~~fD~V~~~~~~~~~-~~-----~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 93 -NDAAGYV-----A-NEKCDVAACVGATWIA-GG-----FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp -SCCTTCC-----C-SSCEEEEEEESCGGGT-SS-----SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred -CChHhCC-----c-CCCCCEEEECCChHhc-CC-----HHHHHHHHHHHcCCCeEEEEecC
Confidence 2233221 1 2222234445566764 22 35566655 568998544 4443
No 62
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=82.44 E-value=3.6 Score=39.15 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=57.5
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecccccc-cccc-
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLED-VRLW- 470 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~-l~~~- 470 (667)
-+|+|+|.+.|.-=.. ||.+- ++.-+||+|+.+...++.+.+++. ..|+. ++|. .....+ +...
T Consensus 60 ~~vLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~--~~d~~~~l~~~~ 127 (221)
T 3u81_A 60 SLVLELGAYCGYSAVR----MARLL--QPGARLLTMEINPDCAAITQQMLN----FAGLQDKVTIL--NGASQDLIPQLK 127 (221)
T ss_dssp SEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEESCHHHHHHHHHHHH----HHTCGGGEEEE--ESCHHHHGGGTT
T ss_pred CEEEEECCCCCHHHHH----HHHhC--CCCCEEEEEeCChHHHHHHHHHHH----HcCCCCceEEE--ECCHHHHHHHHH
Confidence 4799999998863333 33321 123699999999888877766554 34553 5553 222111 1100
Q ss_pred -ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeeec
Q 005954 471 -MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQE 521 (667)
Q Consensus 471 -~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEqE 521 (667)
......=+.|+++... |+.. ....++..++-|+|.-+++++.-
T Consensus 128 ~~~~~~~fD~V~~d~~~--~~~~------~~~~~~~~~~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 128 KKYDVDTLDMVFLDHWK--DRYL------PDTLLLEKCGLLRKGTVLLADNV 171 (221)
T ss_dssp TTSCCCCCSEEEECSCG--GGHH------HHHHHHHHTTCCCTTCEEEESCC
T ss_pred HhcCCCceEEEEEcCCc--ccch------HHHHHHHhccccCCCeEEEEeCC
Confidence 0000122455555432 2221 12345665688999988777643
No 63
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=82.41 E-value=5.7 Score=36.57 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=63.1
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEecccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~~lE~l~~~~L 472 (667)
.-.|+|+|.|.|.- ...++.+. .-++|||+.+...++.+.+++. ..++ ..+|. ...+.++... +
T Consensus 45 ~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~~~~~~~a~~~~~----~~~~~~v~~~--~~d~~~~~~~-~ 109 (189)
T 3p9n_A 45 GLAVLDLYAGSGAL----GLEALSRG----AASVLFVESDQRSAAVIARNIE----ALGLSGATLR--RGAVAAVVAA-G 109 (189)
T ss_dssp TCEEEEETCTTCHH----HHHHHHTT----CSEEEEEECCHHHHHHHHHHHH----HHTCSCEEEE--ESCHHHHHHH-C
T ss_pred CCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECCHHHHHHHHHHHH----HcCCCceEEE--EccHHHHHhh-c
Confidence 34799999998842 22233332 3489999999988877766654 3354 34442 2222222110 1
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHh---cCCcEEEEeeecCCCC
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRS---TNPTIVLMAEQEAEHN 525 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRs---L~PkVVVlvEqEadhN 525 (667)
.-..=+.|+.|..+ |+.. .....+|..++. |+|.-+++++.+....
T Consensus 110 ~~~~fD~i~~~~p~--~~~~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 110 TTSPVDLVLADPPY--NVDS-----ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CSSCCSEEEECCCT--TSCH-----HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred cCCCccEEEECCCC--Ccch-----hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 11223566777654 3211 235567777765 9999888887765543
No 64
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=81.79 E-value=23 Score=33.26 Aligned_cols=89 Identities=11% Similarity=0.020 Sum_probs=48.9
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-.|+|+|.+.|.- ...|+.+ |||+.+...++.+.++ ++ +|. ...++++ .
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s~~~~~~a~~~--------~~--~~~--~~d~~~~-----~ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPSERMAEIARKR--------GV--FVL--KGTAENL-----P 97 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESCHHHHHHHHHT--------TC--EEE--ECBTTBC-----C
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCCHHHHHHHHhc--------CC--EEE--EcccccC-----C
Confidence 34799999998863 3445554 9999988776655543 44 332 2222222 1
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...+..=+|-|...||++ . ....+|+.+ +-|+|.-++++
T Consensus 98 ~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFV-D-----DPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp SCTTCEEEEEEESCGGGS-S-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhc-c-----CHHHHHHHHHHHcCCCcEEEE
Confidence 222222233344456765 2 245666665 56899844443
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=81.43 E-value=12 Score=34.86 Aligned_cols=111 Identities=12% Similarity=0.074 Sum_probs=65.2
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.|.+.+.....-+|+|+|.|.|. +...|+.+ .-++|||+.+...++.+.+++.. .+ .++|. ...
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~--~~d 105 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPRAIGRACQRTKR----WS-HISWA--ATD 105 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHHHHHHHHHHTTT----CS-SEEEE--ECC
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHHHHHHHHHhccc----CC-CeEEE--Ecc
Confidence 34445556677899999999994 55556655 25899999999888777766543 22 34443 222
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
++++. .++..=+|-|...|||+. +. ..+..+|+.+ +-|+|.-+++..
T Consensus 106 ~~~~~------~~~~fD~v~~~~~l~~~~-~~--~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 106 ILQFS------TAELFDLIVVAEVLYYLE-DM--TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp TTTCC------CSCCEEEEEEESCGGGSS-SH--HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhCC------CCCCccEEEEccHHHhCC-CH--HHHHHHHHHHHHHcCCCCEEEEE
Confidence 33222 122222444456677753 21 2344556555 679998665553
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=81.11 E-value=3.3 Score=41.17 Aligned_cols=115 Identities=9% Similarity=0.051 Sum_probs=64.2
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+..-.+...++|. ..
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~--~~ 140 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLV--QG 140 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEE--EC
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHHHHhhcccccccceEEE--eC
Confidence 455666654444 89999999997 44555555 2 4799999999888877776543211111234443 22
Q ss_pred ccccccccccccCCCcE-EEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 463 RLEDVRLWMLHVKEKES-VAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEa-LAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.++++. . ++.. +||.+...+|++ .+ ..+..+|+.+ +-|+|.-.++++
T Consensus 141 d~~~~~-----~-~~~fD~v~~~~~~~~~~-~~---~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 141 DMSAFA-----L-DKRFGTVVISSGSINEL-DE---ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp BTTBCC-----C-SCCEEEEEECHHHHTTS-CH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhcCC-----c-CCCcCEEEECCcccccC-CH---HHHHHHHHHHHHHcCCCcEEEEE
Confidence 233222 1 2222 233333345543 21 2345677666 568998555554
No 67
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=81.09 E-value=11 Score=33.83 Aligned_cols=115 Identities=11% Similarity=0.074 Sum_probs=65.5
Q ss_pred hhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc---eEE
Q 005954 381 ANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP---FEF 457 (667)
Q Consensus 381 ANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp---FEF 457 (667)
..+.+++.+.-.+.-+|+|+|.|.|. +...|+.+ ..++|+|+.+...++.+.+++. ..+++ ++|
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~~~~~ 106 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRRAIKLAKENIK----LNNLDNYDIRV 106 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHHHHHHHHHHHH----HTTCTTSCEEE
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHHHHHHHHHHHH----HcCCCccceEE
Confidence 33566777765566789999999884 44455555 2489999999888877666553 34554 555
Q ss_pred EEeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 458 HPVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 458 ~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
.. ..+.+. +.-..=+.|+.|.. +|+.. .....+|+.+ +-|+|.-.+++...
T Consensus 107 ~~--~d~~~~----~~~~~~D~v~~~~~--~~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 107 VH--SDLYEN----VKDRKYNKIITNPP--IRAGK-----EVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp EE--CSTTTT----CTTSCEEEEEECCC--STTCH-----HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EE--Cchhcc----cccCCceEEEECCC--cccch-----hHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 32 222211 11111144555543 33311 2344566555 66899865555443
No 68
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=80.81 E-value=2 Score=40.44 Aligned_cols=118 Identities=10% Similarity=0.082 Sum_probs=65.0
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEeccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVDR 463 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~~ 463 (667)
.++.+.....-+|+|+|.|.|.-= ..|+.+. |..++|||+.+...++.+.++..+-++..++ .++|. ...
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~----~~la~~~---p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~--~~d 89 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHP----YKVARQN---PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYL--WAT 89 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHH----HHHHHHC---TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEE--ECC
T ss_pred HHHHhhccCCCEEEEecCCCCHHH----HHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEE--ecc
Confidence 444444556678999999998533 3344431 3479999999988777666555444445565 35553 223
Q ss_pred cccccccccccCCCcEEEEEecc-chh-hcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIF-QLH-KTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~-~LH-~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
++++.. .-.. +.+.++..+ .+| +.+.|. ..+|+.+ +-|+|.-.+++..
T Consensus 90 ~~~l~~---~~~~-d~v~~~~~~~~~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 90 AERLPP---LSGV-GELHVLMPWGSLLRGVLGSS-----PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp STTCCS---CCCE-EEEEEESCCHHHHHHHHTSS-----SHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhCCC---CCCC-CEEEEEccchhhhhhhhccH-----HHHHHHHHHHcCCCcEEEEEe
Confidence 333321 1111 333333322 222 123332 3455555 6799997766643
No 69
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=80.64 E-value=9 Score=35.69 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=56.9
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|. +...|+.+ ++ ++|+|+.+...++.+.+++.. .+...+|.. ..+.++. +.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~---~~ 100 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISEDMIRKAREYAKS----RESNVEFIV--GDARKLS---FE 100 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHH----TTCCCEEEE--CCTTSCC---SC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHHHHHHHHHHHHh----cCCCceEEE--CchhcCC---CC
Confidence 4589999999983 44555554 22 899999998888777665532 333344432 2222221 11
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
-..=+.|+.|..+.+|+. .....+|+.+ +-|+|.-++++
T Consensus 101 ~~~~D~v~~~~~~~~~~~------~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEP------LELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp TTCEEEEEEESCGGGCCH------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcEEEEEEcCchHhCCH------HHHHHHHHHHHHHcCCCcEEEE
Confidence 111245666655444432 1245566655 56899854443
No 70
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=80.05 E-value=8.8 Score=38.09 Aligned_cols=111 Identities=12% Similarity=0.086 Sum_probs=63.4
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~ 471 (667)
...-+|+|+|.|.|. +...|+.+- ++..++|||+.+...++.+.+++... ....-..+|. ...++++....
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~--~~d~~~~~~~~ 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFK--ISSSDDFKFLG 105 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEE--ECCTTCCGGGC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEE--EcCHHhCCccc
Confidence 456789999999884 344444321 12468999999998888777765443 0112344553 23334333211
Q ss_pred -cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 472 -LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 472 -L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
..+..+..=+|-|...||++ + ...+|+.+ +-|+|.-++++
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~--~-----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF--D-----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS--C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh--C-----HHHHHHHHHHhcCCCcEEEE
Confidence 01122444456666678886 2 35566555 56899855544
No 71
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=79.86 E-value=6.7 Score=40.86 Aligned_cols=108 Identities=10% Similarity=0.070 Sum_probs=58.7
Q ss_pred HHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 383 EMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 383 qAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
..|++.+. -...-+|+|+|-+.|.--..|.+.. |.+++|+++. ...++. |+.. -..+|..-
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------p~~~~~~~D~-~~~~~~--------a~~~-~~v~~~~~- 251 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-------PTIKGVNFDL-PHVISE--------APQF-PGVTHVGG- 251 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-------TTCEEEEEEC-HHHHTT--------CCCC-TTEEEEEC-
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-------CCCeEEEecC-HHHHHh--------hhhc-CCeEEEeC-
Confidence 45777776 3456799999999996444443332 3578999987 333322 2211 12344321
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeec
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQE 521 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqE 521 (667)
.+.+ .+..+++++.. .-||++- | .....+|+.+ +.|+|. .++++|.-
T Consensus 252 -D~~~------~~p~~D~v~~~--~vlh~~~-d---~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 252 -DMFK------EVPSGDTILMK--WILHDWS-D---QHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp -CTTT------CCCCCSEEEEE--SCGGGSC-H---HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred -CcCC------CCCCCCEEEeh--HHhccCC-H---HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 1111 11123554433 3467652 2 2345677777 568997 45566654
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=79.86 E-value=9.4 Score=34.28 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=35.0
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRL 444 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL 444 (667)
..+++.+-. +.-+|+|+|.+.|. +...|+.+ + .++|+|+.+...++.+.+++
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~~~~~~~a~~~~ 88 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLDPILIDYAKQDF 88 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCCHHHHHHHHHhC
Confidence 345555533 34589999999886 34455554 2 38999999988777666554
No 73
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=79.83 E-value=13 Score=35.40 Aligned_cols=102 Identities=11% Similarity=0.133 Sum_probs=58.3
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~ 471 (667)
.+.-+|+|+|.|.|.-- ..|+.+ + .++|||+.+...++.+.+++ +...-.++|. ...++++
T Consensus 38 ~~~~~vLDiG~G~G~~~----~~l~~~-~----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~--~~d~~~~---- 98 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIA----LPLIAR-G----YRYIALDADAAMLEVFRQKI----AGVDRKVQVV--QADARAI---- 98 (263)
T ss_dssp SSCCEEEEETCTTSTTH----HHHHTT-T----CEEEEEESCHHHHHHHHHHT----TTSCTTEEEE--ESCTTSC----
T ss_pred CCCCEEEEeCCcCCHHH----HHHHHC-C----CEEEEEECCHHHHHHHHHHh----hccCCceEEE--EcccccC----
Confidence 34568999999998643 344444 2 48999999988887776654 2222334543 2223322
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
...++..=+|-+...||++- ....+|+.+ +-|+|.-.+++.
T Consensus 99 -~~~~~~fD~v~~~~~l~~~~------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 99 -PLPDESVHGVIVVHLWHLVP------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -CSCTTCEEEEEEESCGGGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCCeeEEEECCchhhcC------CHHHHHHHHHHHCCCCcEEEEE
Confidence 22233222334445677752 245566555 678998555544
No 74
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=79.55 E-value=8 Score=36.45 Aligned_cols=110 Identities=12% Similarity=0.133 Sum_probs=61.5
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
-..|++.+.....-+|+|+|.|.|. +...|+.+. . -++|||+.+...++.+.+++.. - .++|. .
T Consensus 32 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~--~--~~v~~vD~s~~~~~~a~~~~~~----~--~~~~~--~ 95 (243)
T 3bkw_A 32 WPALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEHG--A--SYVLGLDLSEKMLARARAAGPD----T--GITYE--R 95 (243)
T ss_dssp HHHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHTT--C--SEEEEEESCHHHHHHHHHTSCS----S--SEEEE--E
T ss_pred HHHHHHhccccCCCEEEEEcCcCCH----HHHHHHHCC--C--CeEEEEcCCHHHHHHHHHhccc----C--CceEE--E
Confidence 3456666665556689999999985 444555552 1 2899999998777665554321 1 23332 2
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
..++++ ....+..=+|-+...||++ . ....+|+.+ +-|+|.-.+++
T Consensus 96 ~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 96 ADLDKL-----HLPQDSFDLAYSSLALHYV-E-----DVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp CCGGGC-----CCCTTCEEEEEEESCGGGC-S-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cChhhc-----cCCCCCceEEEEecccccc-c-----hHHHHHHHHHHhcCcCcEEEE
Confidence 222222 1222322233344467775 1 245666665 56899855444
No 75
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=79.52 E-value=3.5 Score=40.25 Aligned_cols=115 Identities=12% Similarity=0.124 Sum_probs=62.9
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVD 462 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~ 462 (667)
+.|++.+.-.+.-+|+|+|.|.|. +...|+. + ..++|||+.+...++...++. ..+|. ..
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-~----~~~v~gvD~s~~~~~~a~~~~---------~~~~~--~~ 83 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-Q----GLFVYAVEPSIVMRQQAVVHP---------QVEWF--TG 83 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-T----TCEEEEECSCHHHHHSSCCCT---------TEEEE--CC
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-C----CCEEEEEeCCHHHHHHHHhcc---------CCEEE--EC
Confidence 445666655556789999999986 3444444 2 368999999886554332221 33442 22
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCc-EEEEeeecCCCCCcch
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPT-IVLMAEQEAEHNSPFL 529 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~Pk-VVVlvEqEadhNsp~F 529 (667)
.++++. ..++..=+|-|...|||+ . ....+|+.+ +-|+ . .+++++.+.......+
T Consensus 84 d~~~~~-----~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~ 140 (261)
T 3ege_A 84 YAENLA-----LPDKSVDGVISILAIHHF-S-----HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIW 140 (261)
T ss_dssp CTTSCC-----SCTTCBSEEEEESCGGGC-S-----SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCG
T ss_pred chhhCC-----CCCCCEeEEEEcchHhhc-c-----CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHH
Confidence 333322 222222233444557775 2 245555554 5677 6 4667776654444333
No 76
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=77.66 E-value=4.6 Score=41.43 Aligned_cols=98 Identities=11% Similarity=0.077 Sum_probs=52.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-+|+|+|.|.|. +...|+.+- |.+++|+++. ...++.. +... ..+|..- +-.+.+.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a--------~~~~-~v~~~~~-d~~~~~p---- 245 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR-PQVVENL--------SGSN-NLTYVGG-DMFTSIP---- 245 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHTTC--------CCBT-TEEEEEC-CTTTCCC----
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC-HHHHhhc--------ccCC-CcEEEec-cccCCCC----
Confidence 34689999999995 455555442 3478999998 5444322 2221 1444321 1111111
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCC----cEEEEeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNP----TIVLMAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~P----kVVVlvEqE 521 (667)
.-++++ +...||++ .| .....+|+.+ +.|+| ..++++|.-
T Consensus 246 ---~~D~v~--~~~~lh~~-~d---~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 246 ---NADAVL--LKYILHNW-TD---KDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp ---CCSEEE--EESCGGGS-CH---HHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred ---CccEEE--eehhhccC-CH---HHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 123333 44457775 22 1233677666 56899 366666654
No 77
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=76.47 E-value=5.6 Score=41.21 Aligned_cols=108 Identities=15% Similarity=0.126 Sum_probs=57.3
Q ss_pred HHHHHhhC-CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 383 EMLLRAFD-GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 383 qAILEA~e-G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
..|++.+. -.+.-+|+|+|.+.|.- ...|+.+- |.+++|+++. ...++. |+.+. ..+|..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~-~~~~~~--------a~~~~-~v~~~~-- 258 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRN----LELIISKY---PLIKGINFDL-PQVIEN--------APPLS-GIEHVG-- 258 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-HHHHTT--------CCCCT-TEEEEE--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHH----HHHHHHHC---CCCeEEEeCh-HHHHHh--------hhhcC-CCEEEe--
Confidence 46777765 24557899999999863 44444432 3578999987 444432 22211 134432
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeec
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQE 521 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqE 521 (667)
..+.+ . + ++ +=+|-+...||++- | .....+|+.+ +.|+|.- ++++|.-
T Consensus 259 ~d~~~-~-----~-~~-~D~v~~~~~lh~~~-d---~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 259 GDMFA-S-----V-PQ-GDAMILKAVCHNWS-D---EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp CCTTT-C-----C-CC-EEEEEEESSGGGSC-H---HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccc-C-----C-CC-CCEEEEecccccCC-H---HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 11111 0 1 11 22333455677752 2 1234677666 5689974 5555543
No 78
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=76.24 E-value=10 Score=37.81 Aligned_cols=104 Identities=9% Similarity=0.012 Sum_probs=59.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEeccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~ 471 (667)
.-+|+|+|.|.|. +...|+.+ ..|..++|||+.+...++.+.+++ +..|+. .+|. ...+.++.
T Consensus 119 ~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~--~~d~~~~~--- 183 (305)
T 3ocj_A 119 GCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPEALDGATRLA----AGHALAGQITLH--RQDAWKLD--- 183 (305)
T ss_dssp TCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHHHHHHHHHHH----TTSTTGGGEEEE--ECCGGGCC---
T ss_pred CCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHHHHHHHHHHH----HhcCCCCceEEE--ECchhcCC---
Confidence 4579999999884 44445422 123579999999988887776654 345555 5553 22233221
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
.. +..=+|-|..-+|++. +. .....+|+.+ +-|+|.-.+++
T Consensus 184 --~~-~~fD~v~~~~~~~~~~-~~--~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 184 --TR-EGYDLLTSNGLNIYEP-DD--ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp --CC-SCEEEEECCSSGGGCC-CH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred --cc-CCeEEEEECChhhhcC-CH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 11 2222333445566642 21 2233467666 56999866655
No 79
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=76.23 E-value=5.6 Score=37.18 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=25.9
Q ss_pred HHHHhhCC-CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChH
Q 005954 384 MLLRAFDG-KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQ 435 (667)
Q Consensus 384 AILEA~eG-~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~ 435 (667)
.|++.+.. ...-+|+|+|.|.|. +...|+ .++|||+.+..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~--------~~v~~~D~s~~ 97 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCR----LASSIR--------NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCH----HHHHCC--------SCEEEEESSCS
T ss_pred HHHHHHhccCCCCeEEEECCcCCH----HHHHhh--------ccEEEEeCCCC
Confidence 35555432 344689999999886 233332 47999988765
No 80
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=75.72 E-value=11 Score=41.23 Aligned_cols=120 Identities=8% Similarity=0.018 Sum_probs=66.5
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH---HHHHcCCc-eEEE
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG---FAEALNLP-FEFH 458 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~---fA~slgVp-FEF~ 458 (667)
..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+.+...++.+.+.+.+ .++..|+. -.+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 446666654555679999998885 3333443322 23799999998766655554433 45666762 2333
Q ss_pred EeccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEe
Q 005954 459 PVVDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMA 518 (667)
Q Consensus 459 ~V~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlv 518 (667)
.+...+.++.... .+..=.+|++|..+ +. . .....+....|.|+|.-.+++
T Consensus 236 fi~GD~~~lp~~d-~~~~aDVVf~Nn~~--F~--p----dl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 236 LERGDFLSEEWRE-RIANTSVIFVNNFA--FG--P----EVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEECCTTSHHHHH-HHHTCSEEEECCTT--CC--H----HHHHHHHHHHTTSCTTCEEEE
T ss_pred EEECcccCCcccc-ccCCccEEEEcccc--cC--c----hHHHHHHHHHHcCCCCcEEEE
Confidence 3443443333211 11233567777653 21 1 122345566788999854444
No 81
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=75.11 E-value=13 Score=34.97 Aligned_cols=104 Identities=11% Similarity=0.178 Sum_probs=60.9
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-+|+|+|.+.|.- ...|+.+ + .++|||+.+...++.+.+++.. .++.++|. ...++++.
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~-~----~~~~~~D~s~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~~---- 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK-F----KNTWAVDLSQEMLSEAENKFRS----QGLKPRLA--CQDISNLN---- 97 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG-S----SEEEEECSCHHHHHHHHHHHHH----TTCCCEEE--CCCGGGCC----
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC-C----CcEEEEECCHHHHHHHHHHHhh----cCCCeEEE--ecccccCC----
Confidence 456899999999873 3444544 1 4799999999888877776543 34444443 22232221
Q ss_pred ccCCCcEEEEEecc-chhhcccCCCCChHHHHHHHHH-hcCCcEEEEeee
Q 005954 473 HVKEKESVAVNCIF-QLHKTLYSGNGGVLRDFLGLIR-STNPTIVLMAEQ 520 (667)
Q Consensus 473 ~i~~gEaLAVN~~~-~LH~lL~des~~~l~~fL~~IR-sL~PkVVVlvEq 520 (667)
.. +..=+|-|.. .|||+... .....+|+.++ .|+|.-+++++.
T Consensus 98 -~~-~~fD~v~~~~~~l~~~~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 -IN-RKFDLITCCLDSTNYIIDS---DDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp -CS-CCEEEEEECTTGGGGCCSH---HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -cc-CCceEEEEcCccccccCCH---HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 11 2222333444 67775311 23556777664 589986666643
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=74.93 E-value=13 Score=35.47 Aligned_cols=111 Identities=18% Similarity=0.276 Sum_probs=62.4
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRL 464 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~l 464 (667)
+++.....+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..++..+|.. ..+
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~~--~d~ 97 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEEMLRVARRKAK----ERNLKIEFLQ--GDV 97 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHH----HTTCCCEEEE--SCG
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHH----hcCCceEEEE--CCh
Confidence 3444443445689999999985 34455554 2 489999999988887776654 3455555532 222
Q ss_pred ccccccccccCCCcEEEEEecc-chhhcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 465 EDVRLWMLHVKEKESVAVNCIF-QLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 465 E~l~~~~L~i~~gEaLAVN~~~-~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
.++. .. +..=+|-|.+ .+|+. .. .....+|+.+ +-|+|.-+++.+.
T Consensus 98 ~~~~-----~~-~~fD~v~~~~~~~~~~-~~---~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 98 LEIA-----FK-NEFDAVTMFFSTIMYF-DE---EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGCC-----CC-SCEEEEEECSSGGGGS-CH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcc-----cC-CCccEEEEcCCchhcC-CH---HHHHHHHHHHHHHcCCCeEEEEec
Confidence 2221 11 2111222322 22322 11 2355667665 5699997777764
No 83
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=74.84 E-value=5.1 Score=39.68 Aligned_cols=111 Identities=9% Similarity=0.060 Sum_probs=64.2
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.|++.+... =+|+|+|.|.| +|--.++.+. |..++++++-+...++-+.++ |+..|+...+.. .+-
T Consensus 42 ~~~~~l~~~--~~VLDlGCG~G----plAl~l~~~~---p~a~~~A~Di~~~~leiar~~----~~~~g~~~~v~~-~d~ 107 (200)
T 3fzg_A 42 YVFGNIKHV--SSILDFGCGFN----PLALYQWNEN---EKIIYHAYDIDRAEIAFLSSI----IGKLKTTIKYRF-LNK 107 (200)
T ss_dssp HHHHHSCCC--SEEEEETCTTH----HHHHHHHCSS---CCCEEEEECSCHHHHHHHHHH----HHHSCCSSEEEE-ECC
T ss_pred HHHhhcCCC--CeEEEecCCCC----HHHHHHHhcC---CCCEEEEEeCCHHHHHHHHHH----HHhcCCCccEEE-ecc
Confidence 344444333 37899988766 4444554432 345999999999888777765 466788754433 111
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeee
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQ 520 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEq 520 (667)
.+. .-++..=+|-...-||++ .+.. + ...+.++.|+|..+++.=.
T Consensus 108 ~~~-------~~~~~~DvVLa~k~LHlL-~~~~-~---al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 108 ESD-------VYKGTYDVVFLLKMLPVL-KQQD-V---NILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH-------HTTSEEEEEEEETCHHHH-HHTT-C---CHHHHHHTCEEEEEEEEEE
T ss_pred ccc-------CCCCCcChhhHhhHHHhh-hhhH-H---HHHHHHHHhCCCCEEEEeC
Confidence 111 112221222233346765 4432 2 2457889999998877744
No 84
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=74.83 E-value=21 Score=33.81 Aligned_cols=101 Identities=11% Similarity=-0.013 Sum_probs=57.0
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHV 474 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i 474 (667)
-.|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+++.+.- ..-..+|. ...+.++..
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~--~~d~~~~~~----- 129 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMASP-----ERFVVGLDISESALAKANETYGSSP--KAEYFSFV--KEDVFTWRP----- 129 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCBT-----TEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEE--CCCTTTCCC-----
T ss_pred CCEEEeCCCCCH----HHHHHHhC-----CCeEEEEECCHHHHHHHHHHhhccC--CCcceEEE--ECchhcCCC-----
Confidence 499999999884 34455542 3689999999988877776654311 11124443 222222211
Q ss_pred CCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCcEEEEe
Q 005954 475 KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPTIVLMA 518 (667)
Q Consensus 475 ~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~PkVVVlv 518 (667)
.+..=+|-|...||++.. .....+|+.++ -|+|.-.+++
T Consensus 130 -~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 -TELFDLIFDYVFFCAIEP----EMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp -SSCEEEEEEESSTTTSCG----GGHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCeeEEEEChhhhcCCH----HHHHHHHHHHHHHCCCCcEEEE
Confidence 111113334455666521 24566777765 5999855554
No 85
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=74.51 E-value=17 Score=38.05 Aligned_cols=145 Identities=12% Similarity=0.146 Sum_probs=78.1
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
++|++...-.+.-.|+|+|.|.| .+...|+.+ +. -++|||+.+ ..++.+.+ .++..|++ .+| +
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~~~~~a~~----~~~~~~~~~~v~~--~ 117 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-KMADHARA----LVKANNLDHIVEV--I 117 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-TTHHHHHH----HHHHTTCTTTEEE--E
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-HHHHHHHH----HHHHcCCCCeEEE--E
Confidence 34444444445568999999999 344455555 21 389999998 65654433 34456665 444 3
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeecCCCC----CcchhH---H
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQEAEHN----SPFLET---R 532 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqEadhN----sp~F~~---R 532 (667)
...++++.. . ..=+.|+.|.+ .|. +..+ ..+..+|..+ +-|+|.-+++...-.-+. ...+.. .
T Consensus 118 ~~d~~~~~~---~-~~~D~Iv~~~~--~~~-l~~e--~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~ 188 (376)
T 3r0q_C 118 EGSVEDISL---P-EKVDVIISEWM--GYF-LLRE--SMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRND 188 (376)
T ss_dssp ESCGGGCCC---S-SCEEEEEECCC--BTT-BTTT--CTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHH
T ss_pred ECchhhcCc---C-CcceEEEEcCh--hhc-ccch--HHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhh
Confidence 334444432 1 11234444443 232 2222 3467788887 889999777665432221 222221 3
Q ss_pred HHHHHHHHHHHHHHhhhhC
Q 005954 533 VSNSLRYYSALFDLIDYSL 551 (667)
Q Consensus 533 F~EAL~yYsAlFDSLea~l 551 (667)
|.+.+..+..+++..+...
T Consensus 189 ~~~~~~~W~~fw~~~~~~~ 207 (376)
T 3r0q_C 189 FDGAMADWHNFSDEIKSYY 207 (376)
T ss_dssp HHHHHHHHHHHHHHHHHST
T ss_pred hhhhhhhhhhhhhccCccc
Confidence 4455555556665544443
No 86
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=74.33 E-value=27 Score=31.98 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=57.2
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|.-...++.. ++ .++|||+.+...++.+.+++.+ .+..++|. ...++++ .
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~----~~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~-----~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE----DG----YKTYGIEISDLQLKKAENFSRE----NNFKLNIS--KGDIRKL-----P 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH----TT----CEEEEEECCHHHHHHHHHHHHH----HTCCCCEE--ECCTTSC-----C
T ss_pred CCEEEEECCCCCHHHHHHHHh----CC----CEEEEEECCHHHHHHHHHHHHh----cCCceEEE--ECchhhC-----C
Confidence 347999999888654444422 22 4899999999888777766543 23333332 2222222 2
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..++..=+|-|...|||+.. .....+|+.+ +-|+|.-++++.
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMRK----NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp SCTTCEEEEEECSCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCCH----HHHHHHHHHHHHHcCCCcEEEEE
Confidence 22232223334445677521 2345666655 679998554443
No 87
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=73.20 E-value=22 Score=34.49 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=59.2
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-+|+|+|.|.|.--.. |+.+. ..++|||+.+...++.+.+++. ..++.-..+.+...++++. +.
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~~---~~ 129 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEVSINDARVRAR----NMKRRFKVFFRAQDSYGRH---MD 129 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHHHHHHHHHHHH----TSCCSSEEEEEESCTTTSC---CC
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHHHHHHHHHHHH----hcCCCccEEEEECCccccc---cC
Confidence 35899999999964333 33332 2489999999988877766543 3455323333333333221 10
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.++..=+|-|...||+++... .....+|+.+ +-|+|.-.+++.
T Consensus 130 -~~~~fD~v~~~~~l~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 130 -LGKEFDVISSQFSFHYAFSTS--ESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp -CSSCEEEEEEESCGGGGGSSH--HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCCcCEEEECchhhhhcCCH--HHHHHHHHHHHHhcCCCCEEEEE
Confidence 122222333445567643211 2345677665 568998555543
No 88
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=70.98 E-value=39 Score=31.13 Aligned_cols=98 Identities=11% Similarity=0.117 Sum_probs=56.2
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-+|+|+|.|.|. +...|+.+. + -++|||+.+...++.+.+++ +..|+..+|. ...++++.
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~~--~--~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~--~~d~~~~~---- 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLLG--A--KEVICVEVDKEAVDVLIENL----GEFKGKFKVF--IGDVSEFN---- 110 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHTT--C--SEEEEEESCHHHHHHHHHHT----GGGTTSEEEE--ESCGGGCC----
T ss_pred CcCEEEEeeCCCCH----HHHHHHHcC--C--CEEEEEECCHHHHHHHHHHH----HHcCCCEEEE--ECchHHcC----
Confidence 34589999999997 444555552 1 27999999988877766654 3445544443 33333331
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEE
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVL 516 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVV 516 (667)
..=+.|+.|..+...+ . +....+|+.+..+--.+++
T Consensus 111 --~~~D~v~~~~p~~~~~---~---~~~~~~l~~~~~~l~~~~~ 146 (207)
T 1wy7_A 111 --SRVDIVIMNPPFGSQR---K---HADRPFLLKAFEISDVVYS 146 (207)
T ss_dssp --CCCSEEEECCCCSSSS---T---TTTHHHHHHHHHHCSEEEE
T ss_pred --CCCCEEEEcCCCcccc---C---CchHHHHHHHHHhcCcEEE
Confidence 1235778887753211 1 2334566666555433333
No 89
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=69.79 E-value=26 Score=32.37 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=56.6
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRL 464 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~l 464 (667)
+++.+.. +.-.|+|+|.+.|. +...| + .-++|||+.+...++.+.+++ -++ +| +...+
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~---~~~v~~vD~s~~~~~~a~~~~------~~~--~~--~~~d~ 86 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----P---YPQKVGVEPSEAMLAVGRRRA------PEA--TW--VRAWG 86 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----C---CSEEEEECCCHHHHHHHHHHC------TTS--EE--ECCCT
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----C---CCeEEEEeCCHHHHHHHHHhC------CCc--EE--EEccc
Confidence 4444433 45589999999884 33333 1 128999999988777666554 233 33 22222
Q ss_pred ccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeec
Q 005954 465 EDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQE 521 (667)
Q Consensus 465 E~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqE 521 (667)
+++ ...++..=+|-+...|||+ . ....+|+.+ +-|+|.- +++++.+
T Consensus 87 ~~~-----~~~~~~fD~v~~~~~l~~~-~-----~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 87 EAL-----PFPGESFDVVLLFTTLEFV-E-----DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp TSC-----CSCSSCEEEEEEESCTTTC-S-----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccC-----CCCCCcEEEEEEcChhhhc-C-----CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 222 2222222233344556775 2 245666555 6689984 4444443
No 90
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=69.25 E-value=5.3 Score=40.45 Aligned_cols=54 Identities=9% Similarity=0.026 Sum_probs=38.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
..|++.+.-...-+|+|+|.|.|. +...|+.+. -++|||+.+...++.+.+++.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~g-----~~V~gvD~S~~ml~~Ar~~~~ 88 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALERG-----ASVTVFDFSQRMCDDLAEALA 88 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHTT-----CEEEEEESCHHHHHHHHHHTS
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhcC-----CEEEEEECCHHHHHHHHHHHH
Confidence 346666655556789999999886 445566552 379999999988877766543
No 91
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=69.11 E-value=12 Score=33.54 Aligned_cols=61 Identities=11% Similarity=0.070 Sum_probs=42.7
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP 454 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp 454 (667)
..+++.+.-...-+|+|+|.|.| .+...|+.+. |..++|+|+.+...++.+.+++. ..|++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~~~~~~~a~~~~~----~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEISEERRERILSNAI----NLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSCHHHHHHHHHHHH----TTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCCHHHHHHHHHHHH----HhCCC
Confidence 34566665566678999999987 3455555553 35899999999988877766554 45665
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=68.86 E-value=22 Score=33.32 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=60.0
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEecccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~~lE~l~~~~L 472 (667)
.-.|+|+|.|.|.- ...||.+. |..++|||+.+...++.+.+++. ..|+ ..+|. ...+.++.. .+
T Consensus 42 ~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~~l~~a~~~~~----~~~~~~v~~~--~~d~~~~~~-~~ 107 (214)
T 1yzh_A 42 NPIHVEVGSGKGAF----VSGMAKQN---PDINYIGIDIQKSVLSYALDKVL----EVGVPNIKLL--WVDGSDLTD-YF 107 (214)
T ss_dssp CCEEEEESCTTSHH----HHHHHHHC---TTSEEEEEESCHHHHHHHHHHHH----HHCCSSEEEE--ECCSSCGGG-TS
T ss_pred CCeEEEEccCcCHH----HHHHHHHC---CCCCEEEEEcCHHHHHHHHHHHH----HcCCCCEEEE--eCCHHHHHh-hc
Confidence 34699999999853 33444432 24689999999988877766654 3454 24443 223333210 01
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHH-hcCCcEEEEeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIR-STNPTIVLMAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IR-sL~PkVVVlvEqE 521 (667)
.-..=+.|++|......+.-..........+|..+. -|+|.-+++.+.+
T Consensus 108 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 108 EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 111125666665421100000000012356777765 5999976666544
No 93
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=68.60 E-value=14 Score=39.00 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=67.8
Q ss_pred hhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEe
Q 005954 381 ANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPV 460 (667)
Q Consensus 381 ANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V 460 (667)
....+++.+.....-+|+|+|.|.|. +...|+.+. |..+||+|+.+...++.+.+++...--.-.+.++|..-
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 282 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEec
Confidence 44567888876666789999999995 334444432 24689999999988877777654321111123555422
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
+-.+.+. -..=+.|+.|-.|.-.....+ .....+|+.+ +-|+|.-.+++..
T Consensus 283 -D~~~~~~-----~~~fD~Ii~nppfh~~~~~~~---~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 283 -NALSGVE-----PFRFNAVLCNPPFHQQHALTD---NVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp -STTTTCC-----TTCEEEEEECCCC-------C---CHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hhhccCC-----CCCeeEEEECCCcccCcccCH---HHHHHHHHHHHHhCCCCcEEEEEE
Confidence 1111111 111245666766532111111 2334567666 4599996655543
No 94
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=68.50 E-value=14 Score=33.26 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=61.3
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEeccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~ 471 (667)
.-.|+|+|.|.|.- ...|+.++ .-++|||+.+...++.+.+++ +..|++ .+|. ...+.+....
T Consensus 32 ~~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~~--~~d~~~~~~~- 96 (177)
T 2esr_A 32 GGRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRKAQAIIQDNI----IMTKAENRFTLL--KMEAERAIDC- 96 (177)
T ss_dssp SCEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHHHHHHHHHHH----HTTTCGGGEEEE--CSCHHHHHHH-
T ss_pred CCeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE--ECcHHHhHHh-
Confidence 34799999998853 33455552 358999999998887766654 345664 4443 3233221100
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH---HhcCCcEEEEeeecCCCC
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI---RSTNPTIVLMAEQEAEHN 525 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I---RsL~PkVVVlvEqEadhN 525 (667)
+. ..=+.|+.|..+... ....++..+ +-|+|.-+++++......
T Consensus 97 ~~-~~fD~i~~~~~~~~~---------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 97 LT-GRFDLVFLDPPYAKE---------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp BC-SCEEEEEECCSSHHH---------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred hc-CCCCEEEECCCCCcc---------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 00 112456666554211 234556555 668999777777665443
No 95
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=67.91 E-value=29 Score=32.57 Aligned_cols=109 Identities=15% Similarity=0.158 Sum_probs=62.1
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRL 464 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~l 464 (667)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.+...++.+.+++.. .+...+|... .+
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~--d~ 88 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWVQ--DM 88 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEEC--CG
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHHHHHHHHHhhhh----cCCceEEEEc--Ch
Confidence 44445433 479999999985 45556654 4899999999888777766543 3444454322 22
Q ss_pred ccccccccccCCCcEEEEEecc-chhhcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 465 EDVRLWMLHVKEKESVAVNCIF-QLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 465 E~l~~~~L~i~~gEaLAVN~~~-~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
.++. .. +..=+|-|.. .+|++... .....+|+.+ +-|+|.-+++++.
T Consensus 89 ~~~~-----~~-~~fD~v~~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 89 RELE-----LP-EPVDAITILCDSLNYLQTE---ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GGCC-----CS-SCEEEEEECTTGGGGCCSH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcC-----CC-CCcCEEEEeCCchhhcCCH---HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 2221 11 2111222333 56665211 2345566665 5689997777654
No 96
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=67.20 E-value=17 Score=35.04 Aligned_cols=114 Identities=12% Similarity=0.077 Sum_probs=61.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEeccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~~ 471 (667)
+.-.|+|+|.|.|.-.. .||.+. |..+++||+.+...++.+.+++ +..|++ ++| +....+++-...
T Consensus 34 ~~~~vLDiGcG~G~~~~----~lA~~~---p~~~v~giD~s~~~l~~a~~~~----~~~~l~nv~~--~~~Da~~~l~~~ 100 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLV----AMAKDR---PEQDFLGIEVHSPGVGACLASA----HEEGLSNLRV--MCHDAVEVLHKM 100 (218)
T ss_dssp CCCEEEEESCTTCHHHH----HHHHHC---TTSEEEEECSCHHHHHHHHHHH----HHTTCSSEEE--ECSCHHHHHHHH
T ss_pred CCCeEEEEeeeChHHHH----HHHHHC---CCCeEEEEEecHHHHHHHHHHH----HHhCCCcEEE--EECCHHHHHHHH
Confidence 34579999999996443 344332 2468999999998887766553 445653 454 332222221111
Q ss_pred cccCCC--cEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 472 LHVKEK--ESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 472 L~i~~g--EaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
+.++ +.|.+|+....++.......-....||+.+ +-|+|.-++++.-+
T Consensus 101 --~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 101 --IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp --SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred --cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 1222 345555433333221100000113578777 55999987777655
No 97
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=65.90 E-value=31 Score=32.53 Aligned_cols=62 Identities=11% Similarity=0.086 Sum_probs=42.4
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
.+++.+.-...-.|+|+|.|.|. +...|+.+ + .++|||+.+.+.++.+.++ ++..|++ ++|.
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~~~~~a~~~----~~~~g~~~~v~~~ 109 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRADRIENIQKN----IDTYGLSPRMRAV 109 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHHHHHHHHHH----HHHcCCCCCEEEE
Confidence 45666655555679999999885 34455555 2 5899999999888776655 4456776 5553
No 98
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=65.88 E-value=79 Score=28.79 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=54.9
Q ss_pred EEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccccC
Q 005954 396 HIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVK 475 (667)
Q Consensus 396 HIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i~ 475 (667)
.|+|+|.+.|. +...|+.+ + .++|||+.+...++.+.+++.. .++.++|. ...++++. +.-.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~~---~~~~ 93 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQSSVGLAKAKQLAQE----KGVKITTV--QSNLADFD---IVAD 93 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSSHHHHHHHHHHHHH----HTCCEEEE--CCBTTTBS---CCTT
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECCHHHHHHHHHHHHh----cCCceEEE--EcChhhcC---CCcC
Confidence 89999998875 34556655 2 3899999998888777666543 34555553 22232221 1111
Q ss_pred CCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 476 EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 476 ~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.=+.|+.+ + . ++ . ......+|+.+ +-|+|.-++++.
T Consensus 94 ~fD~v~~~--~-~-~~-~---~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 94 AWEGIVSI--F-C-HL-P---SSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp TCSEEEEE--C-C-CC-C---HHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred CccEEEEE--h-h-cC-C---HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 12344432 2 1 22 1 12345677666 568998555544
No 99
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=65.87 E-value=19 Score=37.01 Aligned_cols=146 Identities=14% Similarity=0.068 Sum_probs=79.8
Q ss_pred HHHHHHhcCCccchhhhhhhHHHHHhh----CCC-CeEEEEEccccCCC--ChHHHHHHHhcCCCCCCeEEEeeeCCChH
Q 005954 363 ALRLLNQATPIPKFIHFTANEMLLRAF----DGK-DRVHIIDFDIKQGL--QWPSFFQSLASRPNPPSHVRITGIGESKQ 435 (667)
Q Consensus 363 A~~~f~e~sPf~kFAhftANqAILEA~----eG~-~~VHIIDFgI~~G~--QWPsLIQaLA~R~ggPP~LRITgI~~s~~ 435 (667)
+-..+.++.|.++ ...-+|.+.|..+ .++ ..=+|+|+|.|-+. .--.+.|.++ |..|||+|+.+..
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~sp~ 116 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECCHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCChH
Confidence 3344566778763 2344888887743 222 23379999998754 2223333332 2469999999999
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEEeccccccccc----c--ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-H
Q 005954 436 ELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRL----W--MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-R 508 (667)
Q Consensus 436 ~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~----~--~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-R 508 (667)
.|+....+|... -.-..+|. ...+.++.. . .-.++.++.++|-+..-||++- |+ .....+|+.+ +
T Consensus 117 mLa~Ar~~l~~~---~~~~~~~v--~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~-d~--~~p~~~l~~l~~ 188 (277)
T 3giw_A 117 VLTLSQGLLAST---PEGRTAYV--EADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVL-DE--DDAVGIVRRLLE 188 (277)
T ss_dssp HHHTTHHHHCCC---SSSEEEEE--ECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSC-GG--GCHHHHHHHHHT
T ss_pred HHHHHHHHhccC---CCCcEEEE--EecccChhhhhcccccccccCcCCcchHHhhhhHhcCC-ch--hhHHHHHHHHHH
Confidence 888777766421 11124443 222322210 0 0113335545555666688863 32 2245667555 5
Q ss_pred hcCCc-EEEEeeecCC
Q 005954 509 STNPT-IVLMAEQEAE 523 (667)
Q Consensus 509 sL~Pk-VVVlvEqEad 523 (667)
.|+|. ++++++--.+
T Consensus 189 ~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 189 PLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TSCTTCEEEEEEECCT
T ss_pred hCCCCcEEEEEeccCC
Confidence 68998 5666655433
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=64.81 E-value=7.1 Score=39.10 Aligned_cols=47 Identities=13% Similarity=0.280 Sum_probs=32.2
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
.-.|+|+|.+.|. +...|+.+-+ ..+||||+.+...++.+.+++..+
T Consensus 47 ~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 47 GRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESCHHHHHHHHHTC---
T ss_pred CCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCCHHHHHHHHHHHHhh
Confidence 4579999999993 4444555432 249999999998888777776554
No 101
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=64.76 E-value=26 Score=33.29 Aligned_cols=107 Identities=11% Similarity=0.075 Sum_probs=59.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-.|+|+|.|.|. +...|+.+. ..++|+|+.+...++.+.+++...- +...+|. ...++++.
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~--~~d~~~~~---- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYF--CCGLQDFT---- 141 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEE--ECCGGGCC----
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEE--EcChhhcC----
Confidence 35689999999885 445555543 2489999999888877766553321 1223443 22233222
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEE-Eeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVL-MAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVV-lvEqE 521 (667)
...+..=+|-|...||++. + ..+..+|+.+ +-|+|.-++ +++..
T Consensus 142 -~~~~~fD~v~~~~~l~~~~-~---~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 142 -PEPDSYDVIWIQWVIGHLT-D---QHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp -CCSSCEEEEEEESCGGGSC-H---HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCCCEEEEEEcchhhhCC-H---HHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 2222222333445567752 2 1244666665 569998544 44543
No 102
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=63.78 E-value=24 Score=36.39 Aligned_cols=112 Identities=13% Similarity=0.174 Sum_probs=61.1
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V 460 (667)
++|++.+.-.+.-.|+|+|.|.|. |...|+.+. ..+++||+.+. .++.+.+++ +..|+ ..+| +
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~gvD~s~-~~~~a~~~~----~~~~~~~~i~~--~ 118 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKAG----AKKVLGVDQSE-ILYQAMDII----RLNKLEDTITL--I 118 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESST-HHHHHHHHH----HHTTCTTTEEE--E
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHcC----CCEEEEEChHH-HHHHHHHHH----HHcCCCCcEEE--E
Confidence 455555443444589999999995 444556552 25899999884 555444433 34454 2444 3
Q ss_pred ccccccccccccccCCCcEEEEEec-cchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCI-FQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~-~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...++++. +....=++|+.|.+ +.|++ + ..+..+|..+ +-|+|.-+++.
T Consensus 119 ~~d~~~~~---~~~~~~D~Ivs~~~~~~l~~----~--~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 119 KGKIEEVH---LPVEKVDVIISEWMGYFLLF----E--SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp ESCTTTSC---CSCSCEEEEEECCCBTTBTT----T--CHHHHHHHHHHHHEEEEEEEES
T ss_pred EeeHHHhc---CCCCcEEEEEEcCchhhccC----H--HHHHHHHHHHHhhcCCCcEEEc
Confidence 33333332 11111144555543 22322 1 3466777776 67999977663
No 103
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=63.17 E-value=14 Score=35.64 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=58.4
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~ 473 (667)
.-.|+|+|.|.|. +...|+.+. .++|||+.+...++.+.+++. ++ +|. ...++++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~~-----~~v~gvD~s~~~~~~a~~~~~------~~--~~~--~~d~~~~~----- 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADSF-----GTVEGLELSADMLAIARRRNP------DA--VLH--HGDMRDFS----- 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTTS-----SEEEEEESCHHHHHHHHHHCT------TS--EEE--ECCTTTCC-----
T ss_pred CCcEEEeCCcCCH----HHHHHHHcC-----CeEEEEECCHHHHHHHHhhCC------CC--EEE--ECChHHCC-----
Confidence 3579999999984 556666652 279999999887776665532 33 332 22222221
Q ss_pred cCCCcEEEEEecc-chhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIF-QLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~-~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
. ++..=+|-|.. .||++... ..+..+|+.+ +-|+|.-+++++
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~~~---~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLAGQ---AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSCHH---HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-cCCcCEEEEcCchhhhcCCH---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 23232444554 67775321 2345567665 568999777775
No 104
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=62.63 E-value=38 Score=33.63 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=56.6
Q ss_pred EEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccccccccccccccC
Q 005954 396 HIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVK 475 (667)
Q Consensus 396 HIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i~ 475 (667)
.|+|+|.|.|. +...|+.+- -++|||+.+...++.. +.. -.++|. ....|++ .+.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s~~ml~~a--------~~~-~~v~~~--~~~~e~~-----~~~ 96 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPGEAQIRQA--------LRH-PRVTYA--VAPAEDT-----GLP 96 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESCHHHHHTC--------CCC-TTEEEE--ECCTTCC-----CCC
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCcHHhhhhh--------hhc-CCceee--hhhhhhh-----ccc
Confidence 58999999995 344556542 3799999988766432 221 123332 2233433 333
Q ss_pred CCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEE-EEeeecCCCCCcc
Q 005954 476 EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIV-LMAEQEAEHNSPF 528 (667)
Q Consensus 476 ~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVV-VlvEqEadhNsp~ 528 (667)
++..=+|-|...||++ + ...+|..+ |-|+|.-+ ++.........|.
T Consensus 97 ~~sfD~v~~~~~~h~~--~-----~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~ 144 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF--D-----LDRFWAELRRVARPGAVFAAVTYGLTRVDPE 144 (257)
T ss_dssp SSCEEEEEECSCCTTC--C-----HHHHHHHHHHHEEEEEEEEEEEECCCBCCHH
T ss_pred CCcccEEEEeeehhHh--h-----HHHHHHHHHHHcCCCCEEEEEECCCCCCCHH
Confidence 4444355566677874 2 34555544 66899854 4555444443443
No 105
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=62.27 E-value=24 Score=36.44 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=61.6
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
++|++.+...+.-+|+|+|.|.|. |...++.+. .-++|||+.+. .++.+. +.++..|+. .+| +
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-~~~~a~----~~~~~~~l~~~v~~--~ 104 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-MAQHAE----VLVKSNNLTDRIVV--I 104 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-HHHHHH----HHHHHTTCTTTEEE--E
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-HHHHHH----HHHHHcCCCCcEEE--E
Confidence 567777654455689999999885 455566542 25899999884 443332 233444553 444 3
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAE 519 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvE 519 (667)
...++++.. . ..=+.|+.+.+ ++++.. + .....+....+-|+|.-+++..
T Consensus 105 ~~d~~~~~~---~-~~~D~Ivs~~~--~~~~~~-~--~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 105 PGKVEEVSL---P-EQVDIIISEPM--GYMLFN-E--RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ESCTTTCCC---S-SCEEEEEECCC--BTTBTT-T--SHHHHHHHGGGGEEEEEEEESC
T ss_pred EcchhhCCC---C-CceeEEEEeCc--hhcCCh-H--HHHHHHHHHHhhcCCCeEEEEe
Confidence 334443321 1 11133443333 344432 2 2334455555779999777644
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=61.74 E-value=69 Score=29.12 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=55.8
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEecccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V~~~lE~l~~~~L 472 (667)
-.|+|+|.|.|. +...|+.+-++ .-++|||+.+...++.+.+++. ..|+ .++| +...++++... +
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~v~~--~~~d~~~~~~~-~ 90 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVGE--NGRVFGFDIQDKAIANTTKKLT----DLNLIDRVTL--IKDGHQNMDKY-I 90 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHCT--TCEEEEECSCHHHHHHHHHHHH----HTTCGGGEEE--ECSCGGGGGGT-C
T ss_pred CEEEEcCCCCCH----HHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHH----HcCCCCCeEE--EECCHHHHhhh-c
Confidence 379999999984 33344443211 2389999999988877776654 3455 3444 33333333210 0
Q ss_pred ccCCCcEEEEEeccchh----hcccCCCCChHHHHHHH-HHhcCCcEEEEe
Q 005954 473 HVKEKESVAVNCIFQLH----KTLYSGNGGVLRDFLGL-IRSTNPTIVLMA 518 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH----~lL~des~~~l~~fL~~-IRsL~PkVVVlv 518 (667)
. ..=+.|+.|..+ +. ..... ......+|+. .+-|+|.-.++.
T Consensus 91 ~-~~fD~v~~~~~~-~~~~~~~~~~~--~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 91 D-CPVKAVMFNLGY-LPSGDHSISTR--PETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp C-SCEEEEEEEESB-CTTSCTTCBCC--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred c-CCceEEEEcCCc-ccCcccccccC--cccHHHHHHHHHHhCcCCCEEEE
Confidence 0 122456666554 21 11100 0122345554 466999854443
No 107
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=61.34 E-value=24 Score=36.68 Aligned_cols=118 Identities=11% Similarity=0.061 Sum_probs=67.9
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-CCceEEEEecccccc-ccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-NLPFEFHPVVDRLED-VRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-gVpFEF~~V~~~lE~-l~~~~ 471 (667)
.-+|+|+|.|.|. +...|+.+. +..+||+|+.+...++...+++..++..+ +-.++|. .....+ +. .
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~~---~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~--~~D~~~~l~--~ 189 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARHA---SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV--IGDGVAFLK--N 189 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTCT---TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE--ESCHHHHHH--T
T ss_pred CCEEEEECCCccH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--ECCHHHHHH--h
Confidence 3589999999885 556666653 35799999999998888888777664433 1234543 221111 11 0
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeecCCCCC
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQEAEHNS 526 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqEadhNs 526 (667)
+.-..=++|++|+....+.. +. -..+.+++.+ +.|+|.-++++..+.-...
T Consensus 190 ~~~~~fDlIi~d~~~p~~~~--~~--l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 241 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIGPA--KE--LFEKPFFQSVARALRPGGVVCTQAESLWLH 241 (334)
T ss_dssp SCTTCEEEEEECCCCTTSGG--GG--GGSHHHHHHHHHHEEEEEEEEEECCCTTTC
T ss_pred ccCCCccEEEECCCCccCcc--hh--hhHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 00011256666654333211 10 0124666665 6799998888875544333
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=60.45 E-value=19 Score=33.82 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=58.8
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEeccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~~lE~l~~~~L~ 473 (667)
-+|+|+|.|.|.--..++ .+. . -+||+|+.+...++.+.+++. ..|+ ..+|. ...+++.... .
T Consensus 56 ~~vLDlgcG~G~~~~~l~----~~~--~--~~V~~vD~s~~~l~~a~~~~~----~~~~~~v~~~--~~D~~~~~~~--~ 119 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEAL----SRY--A--AGATLIEMDRAVSQQLIKNLA----TLKAGNARVV--NSNAMSFLAQ--K 119 (202)
T ss_dssp CEEEETTCTTCHHHHHHH----HTT--C--SEEEEECSCHHHHHHHHHHHH----HTTCCSEEEE--CSCHHHHHSS--C
T ss_pred CeEEEeCCCcCHHHHHHH----hcC--C--CEEEEEECCHHHHHHHHHHHH----HcCCCcEEEE--ECCHHHHHhh--c
Confidence 479999999886433332 221 1 289999999988877776554 3455 34443 2222221100 0
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHh---cCCcEEEEeeecC
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRS---TNPTIVLMAEQEA 522 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRs---L~PkVVVlvEqEa 522 (667)
-..=+.|++|..| |. .....+|+.++. |+|.-+++++...
T Consensus 120 ~~~fD~V~~~~p~--~~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 GTPHNIVFVDPPF--RR-------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCCEEEEEECCSS--ST-------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCCEEEECCCC--CC-------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 0111455555553 21 234567888776 9999777776553
No 109
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=58.49 E-value=7.8 Score=39.84 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=55.4
Q ss_pred HHHHhh--CCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEec
Q 005954 384 MLLRAF--DGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVV 461 (667)
Q Consensus 384 AILEA~--eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~ 461 (667)
.|++.+ .=.+.-+|+|+|.+.|.- ...|+.+- |.+++|+++. ...++. |+.+. .++|..-
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~~~~~--------a~~~~-~v~~~~~- 243 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGV----TKLIHEIF---PHLKCTVFDQ-PQVVGN--------LTGNE-NLNFVGG- 243 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHH----HHHHHHHC---TTSEEEEEEC-HHHHSS--------CCCCS-SEEEEEC-
T ss_pred HHHHhcchhccCCCEEEEECCCcCHH----HHHHHHHC---CCCeEEEecc-HHHHhh--------cccCC-CcEEEeC-
Confidence 466655 112335899999999964 44444432 3578999987 343322 22211 1444321
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCC---c-EEEEeeec
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNP---T-IVLMAEQE 521 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~P---k-VVVlvEqE 521 (667)
.+.+ . +..-++++.+ .-||++ .| .....+|+.+ +.|+| . .++++|.-
T Consensus 244 -d~~~-~-----~~~~D~v~~~--~vlh~~-~d---~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 244 -DMFK-S-----IPSADAVLLK--WVLHDW-ND---EQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp -CTTT-C-----CCCCSEEEEE--SCGGGS-CH---HHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred -ccCC-C-----CCCceEEEEc--ccccCC-CH---HHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 1211 1 1123455544 446765 22 1234677766 56899 4 56666654
No 110
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=58.20 E-value=21 Score=36.15 Aligned_cols=101 Identities=14% Similarity=0.130 Sum_probs=59.8
Q ss_pred HhcCCccchhh-hhhhHH----HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHH
Q 005954 368 NQATPIPKFIH-FTANEM----LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGD 442 (667)
Q Consensus 368 ~e~sPf~kFAh-ftANqA----ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~ 442 (667)
+.+.|-.++++ |..|+. |++++.-... +|+|+|-|.|. |-..|+.+. -++|+|+.+.+.++...+
T Consensus 17 ~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~~~~~l~~ 86 (271)
T 3fut_A 17 HGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLRLRPVLEE 86 (271)
T ss_dssp TTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGGGHHHHHH
T ss_pred cCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHHHHHHHHH
Confidence 34556556664 444544 5555555556 99999999985 666777663 379999999887777666
Q ss_pred HHHHHHHHcCCceEEEEeccccccccccccccCCCcEEEEEeccch
Q 005954 443 RLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEKESVAVNCIFQL 488 (667)
Q Consensus 443 RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i~~gEaLAVN~~~~L 488 (667)
++. +-.+++ +.....+++...+ .....|+-|..+..
T Consensus 87 ~~~------~~~v~v--i~~D~l~~~~~~~--~~~~~iv~NlPy~i 122 (271)
T 3fut_A 87 TLS------GLPVRL--VFQDALLYPWEEV--PQGSLLVANLPYHI 122 (271)
T ss_dssp HTT------TSSEEE--EESCGGGSCGGGS--CTTEEEEEEECSSC
T ss_pred hcC------CCCEEE--EECChhhCChhhc--cCccEEEecCcccc
Confidence 553 123333 3333333322211 13456777876643
No 111
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=58.18 E-value=16 Score=35.40 Aligned_cols=120 Identities=16% Similarity=0.111 Sum_probs=60.4
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEecc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVD 462 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~ 462 (667)
.+++... ...=+|+|+|.|.| .+...||.+. +..++|||+.+...+-+...+..+-++..|++ .+|. ..
T Consensus 16 ~~~~~~~-~~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~--~~ 85 (225)
T 3p2e_A 16 ELTEIIG-QFDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV--IA 85 (225)
T ss_dssp HHHHHHT-TCSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE--CC
T ss_pred HHHHHhC-CCCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE--Ec
Confidence 3444433 33347999999988 4556666542 34899999998555433332223334455664 5553 33
Q ss_pred ccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 463 RLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 463 ~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
..+++.. .+ .+-+..|.+.+..++..... ......+|+.+ |-|+|.-.++.
T Consensus 86 d~~~l~~-~~---~d~v~~i~~~~~~~~~~~~~-~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 86 AAESLPF-EL---KNIADSISILFPWGTLLEYV-IKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp BTTBCCG-GG---TTCEEEEEEESCCHHHHHHH-HTTCHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHhhh-hc---cCeEEEEEEeCCCcHHhhhh-hcchHHHHHHHHHhcCCCcEEEE
Confidence 3444421 11 14344444443222110000 00123456555 56999866555
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=57.44 E-value=29 Score=35.87 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=59.5
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~L 472 (667)
-.|+|+|.|.|. +...|+.++ ..+++||+.+ ..++.+.++ ++..|++ .+|. ...++++..
T Consensus 68 ~~VLDvGcG~G~----~~~~la~~g----~~~v~gvD~s-~~l~~a~~~----~~~~~~~~~v~~~--~~d~~~~~~--- 129 (349)
T 3q7e_A 68 KVVLDVGSGTGI----LCMFAAKAG----ARKVIGIECS-SISDYAVKI----VKANKLDHVVTII--KGKVEEVEL--- 129 (349)
T ss_dssp CEEEEESCTTSH----HHHHHHHTT----CSEEEEEECS-THHHHHHHH----HHHTTCTTTEEEE--ESCTTTCCC---
T ss_pred CEEEEEeccchH----HHHHHHHCC----CCEEEEECcH-HHHHHHHHH----HHHcCCCCcEEEE--ECcHHHccC---
Confidence 469999999994 455566652 3589999998 455444433 4455665 5543 334444321
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
....=++|+.|++. +.+.. + ..+..+|..+ |-|+|.-+++.+..
T Consensus 130 ~~~~fD~Iis~~~~--~~l~~-~--~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 130 PVEKVDIIISEWMG--YCLFY-E--SMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp SSSCEEEEEECCCB--BTBTB-T--CCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred CCCceEEEEEcccc--ccccC-c--hhHHHHHHHHHHhCCCCCEEccccc
Confidence 11111344444432 22222 2 3467788777 77999988775443
No 113
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=54.11 E-value=79 Score=33.67 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=62.9
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEeccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDR 463 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~ 463 (667)
+++.+.....-.|+|+|.|.|.--. .||.+ .-+++||+.+.+.++.+.+++ +..|++ .+|. ...
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-----~~~V~gvD~s~~al~~A~~n~----~~~~~~~v~f~--~~d 342 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-----AASVVGVEGVPALVEKGQQNA----RLNGLQNVTFY--HEN 342 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHH----HHHTT-----SSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE--ECC
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHH----HHHhh-----CCEEEEEeCCHHHHHHHHHHH----HHcCCCceEEE--ECC
Confidence 3444443333479999999986443 34544 248999999998887776654 445664 5554 222
Q ss_pred ccc-ccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEee
Q 005954 464 LED-VRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAE 519 (667)
Q Consensus 464 lE~-l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvE 519 (667)
+++ +....+.-..=++|++|-.. ....++++.|..++|+-++.+.
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dPPr-----------~g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDPAR-----------AGAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECCCT-----------TCCHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHhhhhhhhcCCCCEEEECCCC-----------ccHHHHHHHHHhcCCCeEEEEE
Confidence 222 11000111122456654321 1124688889999999888764
No 114
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=53.51 E-value=33 Score=35.06 Aligned_cols=100 Identities=9% Similarity=-0.048 Sum_probs=60.5
Q ss_pred eEEEEEccccCCC-ChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 394 RVHIIDFDIKQGL-QWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~-QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
.-.|+|+|.|.|. -+|.. +..+++|++-+...++-..++ +..+|+++.|...-..... +
T Consensus 106 p~~VLDlGCG~gpLal~~~-----------~~~~y~a~DId~~~i~~ar~~----~~~~g~~~~~~v~D~~~~~-----~ 165 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER-----------GIASVWGCDIHQGLGDVITPF----AREKDWDFTFALQDVLCAP-----P 165 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT-----------TCSEEEEEESBHHHHHHHHHH----HHHTTCEEEEEECCTTTSC-----C
T ss_pred CCeEEEecCCccHHHHHhc-----------cCCeEEEEeCCHHHHHHHHHH----HHhcCCCceEEEeecccCC-----C
Confidence 4489999998773 22211 468999999988877655554 5667899988643211111 1
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeee
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQ 520 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEq 520 (667)
. .+.+++.++- .+|+| .+... ...++.+..|+|..|++.=.
T Consensus 166 ~-~~~DvvLllk--~lh~L-E~q~~---~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 166 A-EAGDLALIFK--LLPLL-EREQA---GSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp C-CBCSEEEEES--CHHHH-HHHST---THHHHHHHHCBCSEEEEEEE
T ss_pred C-CCcchHHHHH--HHHHh-hhhch---hhHHHHHHHhcCCCEEEEcC
Confidence 1 1345555544 35654 32211 23457888999997777644
No 115
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=52.67 E-value=30 Score=34.01 Aligned_cols=128 Identities=14% Similarity=0.048 Sum_probs=65.4
Q ss_pred HHHHhh-CCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 384 MLLRAF-DGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 384 AILEA~-eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
.+|-++ .-...-+|+|+|.|.|.-- ..|+.+. |..+||||+.+...++.+.+++...+. .|+. ++| +
T Consensus 26 ~lL~~~~~~~~~~~VLDlG~G~G~~~----l~la~~~---~~~~v~gvDi~~~~~~~a~~n~~~~~~-~~l~~~v~~--~ 95 (260)
T 2ozv_A 26 MLLASLVADDRACRIADLGAGAGAAG----MAVAARL---EKAEVTLYERSQEMAEFARRSLELPDN-AAFSARIEV--L 95 (260)
T ss_dssp HHHHHTCCCCSCEEEEECCSSSSHHH----HHHHHHC---TTEEEEEEESSHHHHHHHHHHTTSGGG-TTTGGGEEE--E
T ss_pred HHHHHHhcccCCCEEEEeCChHhHHH----HHHHHhC---CCCeEEEEECCHHHHHHHHHHHHhhhh-CCCcceEEE--E
Confidence 344443 3344568999999999633 3344432 247999999998888777665532111 3443 444 3
Q ss_pred cccccccccc----ccccCCCcEEEEEeccchhh-cc-c--------CCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 461 VDRLEDVRLW----MLHVKEKESVAVNCIFQLHK-TL-Y--------SGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 461 ~~~lE~l~~~----~L~i~~gEaLAVN~~~~LH~-lL-~--------des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
...+.++... .+.-..=+.|+.|-.|.... .. . .+....+..+|+.+ +-|+|.-.++++..
T Consensus 96 ~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 96 EADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp ECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 3333332110 01111225677775553210 00 0 00112356677665 57999966666543
No 116
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=52.16 E-value=14 Score=35.21 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=56.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccc-cc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLW-ML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~-~L 472 (667)
.-.|+|+|.|.|. +...|+.+- + ++|||+.+...++.+.+++ .. -..+|. ...+.++... .+
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~~--~---~v~gvD~s~~~~~~a~~~~----~~--~~~~~~--~~d~~~~~~~~~~ 119 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQFF--P---RVIGLDVSKSALEIAAKEN----TA--ANISYR--LLDGLVPEQAAQI 119 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHHS--S---CEEEEESCHHHHHHHHHHS----CC--TTEEEE--ECCTTCHHHHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHhC--C---CEEEEECCHHHHHHHHHhC----cc--cCceEE--ECccccccccccc
Confidence 3469999999884 444455432 2 7999999988887776654 11 134443 2223332211 00
Q ss_pred cc-CCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcE-EEEeeec
Q 005954 473 HV-KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTI-VLMAEQE 521 (667)
Q Consensus 473 ~i-~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkV-VVlvEqE 521 (667)
.. ..-.+ |-+...+|++-. .....+|+.+ +-|+|.- ++++|..
T Consensus 120 ~~~~~~d~--v~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 120 HSEIGDAN--IYMRTGFHHIPV----EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHCSCE--EEEESSSTTSCG----GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccccCccE--EEEcchhhcCCH----HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 00 01223 334444566521 2355666655 5689974 5666654
No 117
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=52.15 E-value=60 Score=33.67 Aligned_cols=133 Identities=11% Similarity=0.037 Sum_probs=75.0
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.|++.+.. --.|+|+|.|.|. |--.++. ..|..++++++-+...++-+.++| ..+|+++.|...-..
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~~~le~a~~~l----~~~g~~~~~~v~D~~ 191 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDARLVGFVDEAL----TRLNVPHRTNVADLL 191 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBHHHHHHHHHHH----HHTTCCEEEEECCTT
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCHHHHHHHHHHH----HhcCCCceEEEeeec
Confidence 45555533 3478999988774 1111222 236789999999988887776654 567999887533111
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeeec--CCCCCcchhHHHHHHHHHHH
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQE--AEHNSPFLETRVSNSLRYYS 541 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEqE--adhNsp~F~~RF~EAL~yYs 541 (667)
.+. .-.+.+++.+| ..+|+| .+.. ....++.+..|+|..|++.=.- ..--++-+ -..|+
T Consensus 192 ~~~------p~~~~DvaL~l--kti~~L-e~q~---kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm-------~~~Y~ 252 (281)
T 3lcv_B 192 EDR------LDEPADVTLLL--KTLPCL-ETQQ---RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM-------FQNYS 252 (281)
T ss_dssp TSC------CCSCCSEEEET--TCHHHH-HHHS---TTHHHHHHHHSSCSEEEEEEECC-------CH-------HHHHH
T ss_pred ccC------CCCCcchHHHH--HHHHHh-hhhh---hHHHHHHHHHhCCCCEEEeccchhhcCCCcch-------hhHHH
Confidence 111 11233444444 345664 3321 1234599999999977776333 22223333 35677
Q ss_pred HHHHHhh
Q 005954 542 ALFDLID 548 (667)
Q Consensus 542 AlFDSLe 548 (667)
..|+..-
T Consensus 253 ~~~e~~~ 259 (281)
T 3lcv_B 253 QSFESQA 259 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 118
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=52.15 E-value=18 Score=39.57 Aligned_cols=114 Identities=12% Similarity=0.154 Sum_probs=62.7
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEe
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPV 460 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V 460 (667)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..+||||+.+. .++.+. +.++..|+. .+| +
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s~-~l~~A~----~~~~~~gl~~~v~~--~ 212 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-MAQHAE----VLVKSNNLTDRIVV--I 212 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECHH-HHHHHH----HHHHHTTCTTTEEE--E
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcHH-HHHHHH----HHHHHcCCCCcEEE--E
Confidence 456676654445689999999886 445666642 36999999876 453333 334455663 444 3
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQ 520 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEq 520 (667)
...++++.. . ..=+.|+.|.+ ++++. ++ ..+..+....+-|+|.-+++.+.
T Consensus 213 ~~d~~~~~~---~-~~fD~Ivs~~~--~~~~~-~e--~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 213 PGKVEEVSL---P-EQVDIIISEPM--GYMLF-NE--RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ESCTTTCCC---S-SCEEEEECCCC--HHHHT-CH--HHHHHHHHGGGGEEEEEEEESCE
T ss_pred ECchhhCcc---C-CCeEEEEEeCc--hHhcC-cH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 334443321 1 11134444433 34432 11 12334445557799998777544
No 119
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=51.54 E-value=25 Score=32.48 Aligned_cols=65 Identities=5% Similarity=0.101 Sum_probs=41.5
Q ss_pred hhHHHHHhhC--CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEE
Q 005954 381 ANEMLLRAFD--GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEF 457 (667)
Q Consensus 381 ANqAILEA~e--G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF 457 (667)
..+.+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..++|+|+.+...++.+.+++. ..+++ ++|
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~----~~~~~~v~~ 113 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDISDESMTAAEENAA----LNGIYDIAL 113 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESCHHHHHHHHHHHH----HTTCCCCEE
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECCHHHHHHHHHHHH----HcCCCceEE
Confidence 3344555543 2345689999999984 334466542 3589999999888877666543 34554 454
No 120
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=50.83 E-value=60 Score=33.06 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=59.0
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEec
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVV 461 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~ 461 (667)
+|++.+.-.+.-+|+|+|.|.|. |...++.+. .-+++||+.+ ..++.+.++ ++..|+. .+| +.
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~~~~~a~~~----~~~~~~~~~i~~--~~ 93 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-SIIEMAKEL----VELNGFSDKITL--LR 93 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-THHHHHHHH----HHHTTCTTTEEE--EE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-HHHHHHHHH----HHHcCCCCCEEE--EE
Confidence 44443322233489999999995 344555542 2489999988 445444333 3445553 444 33
Q ss_pred cccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 462 DRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 462 ~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..++++.. ....=++|+.+.+. +.+. .+ ..+..+|..+ +-|+|.-+++.+
T Consensus 94 ~d~~~~~~---~~~~~D~Ivs~~~~--~~l~-~~--~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 94 GKLEDVHL---PFPKVDIIISEWMG--YFLL-YE--SMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SCTTTSCC---SSSCEEEEEECCCB--TTBS-TT--CCHHHHHHHHHHHEEEEEEEESC
T ss_pred CchhhccC---CCCcccEEEEeCch--hhcc-cH--HHHHHHHHHHHhhcCCCeEEEEe
Confidence 33433321 11111344444332 2222 22 3466777766 679999777643
No 121
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=50.66 E-value=16 Score=37.53 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=65.9
Q ss_pred hhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEe
Q 005954 381 ANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPV 460 (667)
Q Consensus 381 ANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V 460 (667)
..+.|++.+.....-+|+|+|.|.|.--..| +.+. |..++|+|+.+...++.+.+++. ..++..+|.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~l----a~~~---~~~~v~~vD~s~~~l~~a~~~~~----~~~~~~~~~-- 250 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAF----ARHS---PKIRLTLCDVSAPAVEASRATLA----ANGVEGEVF-- 250 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHH----HHHC---TTCBCEEEESBHHHHHHHHHHHH----HTTCCCEEE--
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHH----HHHC---CCCEEEEEECCHHHHHHHHHHHH----HhCCCCEEE--
Confidence 3567888774433347999999998743333 3331 34689999999888877776654 356665552
Q ss_pred ccccccccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 461 VDRLEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 461 ~~~lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.....+. .-..=+.|+.|..| |+.+.. .......+|+.+ +-|+|.-.+++.
T Consensus 251 ~~d~~~~-----~~~~fD~Iv~~~~~--~~g~~~-~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 251 ASNVFSE-----VKGRFDMIISNPPF--HDGMQT-SLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp ECSTTTT-----CCSCEEEEEECCCC--CSSSHH-HHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred Ecccccc-----ccCCeeEEEECCCc--ccCccC-CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 2221111 01112455556554 431100 002245566665 568999655554
No 122
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=50.45 E-value=66 Score=30.32 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=31.1
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHH
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDR 443 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~R 443 (667)
-+|+|+|.+.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG-S----SEEEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECCHHHHHHHHHh
Confidence 579999999987 56666665 2 4899999998877766655
No 123
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=50.00 E-value=77 Score=32.23 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=63.8
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-CCceEEEEecccccc-ccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-NLPFEFHPVVDRLED-VRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-gVpFEF~~V~~~lE~-l~~~~ 471 (667)
.-+|+|+|.+.|. +...|+.+. +..+||+|+.+...++...+++...+..+ +-.+++. .....+ +..
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~-- 164 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKHP---SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGFEFMKQ-- 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHT--
T ss_pred CCEEEEECCCchH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHhh--
Confidence 3589999999885 555666653 35799999999998888888776655444 2234443 211111 110
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeecCC
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQEAE 523 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqEad 523 (667)
.-..=+.|++++..... ... ......|++.+ +.|+|.-+++++....
T Consensus 165 -~~~~fD~Ii~d~~~~~~---~~~-~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 165 -NQDAFDVIITDSSDPMG---PAE-SLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp -CSSCEEEEEEECC---------------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -CCCCceEEEECCCCCCC---cch-hhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 00112566666543221 000 00123466665 6789998888876543
No 124
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=49.52 E-value=57 Score=33.49 Aligned_cols=111 Identities=10% Similarity=0.085 Sum_probs=63.0
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-CCceEEEEecccccc-ccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-NLPFEFHPVVDRLED-VRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-gVpFEF~~V~~~lE~-l~~~~ 471 (667)
.-+|+|+|.|.|. +...|+.+. +..+||+|+.+.+.++.+.+++..++..+ +-.++|. .....+ +..
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D~~~~l~~-- 185 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKYK---SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLEN-- 185 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHH--
T ss_pred CCEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--EccHHHHHhh--
Confidence 3579999999885 555666553 35799999999988887777655432222 1224443 221111 110
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChH--HHHHHHH-HhcCCcEEEEeeecC
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVL--RDFLGLI-RSTNPTIVLMAEQEA 522 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l--~~fL~~I-RsL~PkVVVlvEqEa 522 (667)
.-..=++|++|....++.. ..+ +.+++.+ +.|+|.-+++++...
T Consensus 186 -~~~~fDvIi~d~~~p~~~~------~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPIGPA------ETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp -CCSCEEEEEEECCCSSSGG------GGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -cCCCceEEEECCcCCCCcc------hhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 0011256676653222110 111 5677666 568999888887653
No 125
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=49.44 E-value=50 Score=33.13 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=36.7
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
-.|+|+|.|.|.- .-.|+.+ |..++|||+.+...++.+.+++ +..|+. .+|.
T Consensus 125 ~~vLDlG~GsG~~----~~~la~~----~~~~v~~vDis~~al~~A~~n~----~~~~l~~~v~~~ 178 (284)
T 1nv8_A 125 KTVADIGTGSGAI----GVSVAKF----SDAIVFATDVSSKAVEIARKNA----ERHGVSDRFFVR 178 (284)
T ss_dssp CEEEEESCTTSHH----HHHHHHH----SSCEEEEEESCHHHHHHHHHHH----HHTTCTTSEEEE
T ss_pred CEEEEEeCchhHH----HHHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE
Confidence 4799999999953 3444444 2479999999998887776654 445664 5554
No 126
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=49.42 E-value=1.1e+02 Score=29.78 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=32.1
Q ss_pred CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 391 GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 391 G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
..+.-+|+|+|.|.|+. +++ ++. .+ --+||||+.+...++.+.+++.
T Consensus 53 ~~~g~~vLDiGCG~G~~--~~~--~~~-~~---~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIY--QVL--AAC-DS---FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp SCCEEEEEESSCTTCCG--GGT--TGG-GT---EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHH--HHH--HHH-hh---hcceeeccccHHHHHHHHHHHh
Confidence 34668999999999852 111 121 11 2379999999998888877653
No 127
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=49.18 E-value=33 Score=30.54 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=35.8
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.+++.+.-...-+|+|+|.|.|. +...|+.+. .++|+|+.+...++.+.+++.
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCHHHHHHHHHHHH
Confidence 34444444455689999998884 334455443 589999999888877766554
No 128
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=48.90 E-value=13 Score=33.91 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=29.2
Q ss_pred HHHHhhCC-CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDG-KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG-~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.+++.+.. .+.-+|+|+|.|.|.--..|.+.+ |..++|||+.+...++.+.+++.
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-------PGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-------TTEEEEEEECC------------
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-------CCCeEEEEECCHHHHHHHHHHHH
Confidence 34455544 566899999999996433333332 34799999998887766665544
No 129
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=48.78 E-value=23 Score=32.73 Aligned_cols=57 Identities=16% Similarity=0.099 Sum_probs=39.1
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
..+++.+.-.+.-.|+|+|.|.|. +...|+.+. |..++|+|+.+...++.+.+++..
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s~~~~~~a~~~~~~ 86 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 345666655566789999999886 233344331 246899999999888777766543
No 130
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=48.19 E-value=1.4e+02 Score=28.51 Aligned_cols=48 Identities=23% Similarity=0.173 Sum_probs=34.5
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
+.-.|+|+|.|.|.-- ..||.+. |..++|||+.+...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~~----~~la~~~---~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLM----IDLSPAF---PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHHH----HHHHHHS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHH----HHHHHhC---CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 4568999999999733 3344332 2468999999998888887776654
No 131
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=48.06 E-value=32 Score=38.05 Aligned_cols=110 Identities=22% Similarity=0.269 Sum_probs=62.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcC-CceEEEEeccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALN-LPFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slg-VpFEF~~V~~~lE~l~~~~ 471 (667)
+.+.|+|+|.|-|. |-..||.+. -++|||+.+...++.... .|+.-| +..+|... ..|++..
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~g-----a~V~giD~~~~~i~~a~~----~a~~~~~~~~~~~~~--~~~~~~~-- 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASKG-----ATIVGIDFQQENINVCRA----LAEENPDFAAEFRVG--RIEEVIA-- 128 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHTT-----CEEEEEESCHHHHHHHHH----HHHTSTTSEEEEEEC--CHHHHHH--
T ss_pred CCCeEEEECCCCcH----HHHHHHhCC-----CEEEEECCCHHHHHHHHH----HHHhcCCCceEEEEC--CHHHHhh--
Confidence 34789999999995 777888762 379999999888866543 344444 56666533 3333321
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEeeec
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAEQE 521 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvEqE 521 (667)
...++..=||-|+--|||+........+..|++.|+.- |+.++++-..
T Consensus 129 -~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~-~~~~~~~~~~ 176 (569)
T 4azs_A 129 -ALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADV-TQAVILELAV 176 (569)
T ss_dssp -HCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHH-SSEEEEECCC
T ss_pred -hccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccc-cceeeEEecc
Confidence 11223333566666788874221111123355555432 4455544333
No 132
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=48.01 E-value=72 Score=32.37 Aligned_cols=135 Identities=14% Similarity=0.137 Sum_probs=69.4
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHH-cCC-ceEEEEeccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEA-LNL-PFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~s-lgV-pFEF~~V~~~lE~l~~~~ 471 (667)
.-+|+|+|.|.|. +...|+.++ +.-+||+|+.+...++...+++...... ++- .++|. +.+-.+-+..
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~-~~D~~~~l~~-- 153 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRHK---NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV-IDDGVNFVNQ-- 153 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTCT---TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE-CSCSCC---C--
T ss_pred CCEEEEEeCChhH----HHHHHHhCC---CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE-EChHHHHHhh--
Confidence 3489999999885 556666653 3568999999998888888877665421 211 23332 1111111110
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChH--HHHHHHH-HhcCCcEEEEeeecCCCCCcchhHHHHHHHHHHHHHHHHhh
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVL--RDFLGLI-RSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLID 548 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l--~~fL~~I-RsL~PkVVVlvEqEadhNsp~F~~RF~EAL~yYsAlFDSLe 548 (667)
.-..=++|++++.... ... ..+ ..|++.+ +.|+|.-++++..+.-...+ ..+.+.+.....+|....
T Consensus 154 -~~~~fDvIi~D~~~p~---~~~---~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 154 -TSQTFDVIISDCTDPI---GPG---ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp -CCCCEEEEEECC----------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCSEEE
T ss_pred -cCCCccEEEECCCCcc---Ccc---hhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCCCeE
Confidence 0011245666554211 011 112 5677665 57999977777654322222 234444444445555433
No 133
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=47.72 E-value=30 Score=33.28 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=37.4
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
+++.+.+.+...|+|+|.+.|. +.-.|+.+- ..+..+||||+.+...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCHHHHHHHHHHHH
Confidence 4455555567899999999994 333444331 0135799999999888777766554
No 134
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=47.68 E-value=93 Score=28.97 Aligned_cols=106 Identities=17% Similarity=0.104 Sum_probs=59.9
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC---ceEEEEeccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL---PFEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV---pFEF~~V~~~lE~l~~~~ 471 (667)
-.|+|+|.|.|.--. .++.+. . -++|||+.+...++.+.+++. ..|+ ..+|. .....++...
T Consensus 55 ~~vLDlGcGtG~~~~----~~~~~~--~--~~v~gvD~s~~~l~~a~~~~~----~~~~~~~~v~~~--~~d~~~~~~~- 119 (201)
T 2ift_A 55 SECLDGFAGSGSLGF----EALSRQ--A--KKVTFLELDKTVANQLKKNLQ----TLKCSSEQAEVI--NQSSLDFLKQ- 119 (201)
T ss_dssp CEEEETTCTTCHHHH----HHHHTT--C--SEEEEECSCHHHHHHHHHHHH----HTTCCTTTEEEE--CSCHHHHTTS-
T ss_pred CeEEEcCCccCHHHH----HHHHcc--C--CEEEEEECCHHHHHHHHHHHH----HhCCCccceEEE--ECCHHHHHHh-
Confidence 379999999885322 223331 1 389999999988887776653 3555 34543 2222221100
Q ss_pred cccCC-CcEEEEEeccchhhcccCCCCChHHHHHHHHHh---cCCcEEEEeeecCCC
Q 005954 472 LHVKE-KESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRS---TNPTIVLMAEQEAEH 524 (667)
Q Consensus 472 L~i~~-gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRs---L~PkVVVlvEqEadh 524 (667)
+.-.. =+.|+.|..| |. .....+|+.+.. |+|.-+++++.....
T Consensus 120 ~~~~~~fD~I~~~~~~--~~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 120 PQNQPHFDVVFLDPPF--HF-------NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSSCCEEEEEECCCS--SS-------CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred hccCCCCCEEEECCCC--CC-------ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 00011 1355555543 21 345678888865 999977777665443
No 135
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=47.30 E-value=43 Score=32.90 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=57.3
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEecccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLW 470 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~ 470 (667)
...-+|+|+|.|-|.--..|.+.. |..+||+|+.+...++.+.+++ +.+|+. .+| +...++++...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s~~~~~~a~~~~----~~~~l~~v~~--~~~d~~~~~~~ 145 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDATRKKVAFVERAI----EVLGLKGARA--LWGRAEVLARE 145 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESCHHHHHHHHHHH----HHHTCSSEEE--EECCHHHHTTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHH----HHhCCCceEE--EECcHHHhhcc
Confidence 344689999999998554444332 2478999999988777665543 445664 444 34444544321
Q ss_pred ccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEe
Q 005954 471 MLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMA 518 (667)
Q Consensus 471 ~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlv 518 (667)
...-..=++|+.+.. ..+..++..+ +-|+|.-.+++
T Consensus 146 ~~~~~~fD~I~s~a~------------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 146 AGHREAYARAVARAV------------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTTTTCEEEEEEESS------------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred cccCCCceEEEECCc------------CCHHHHHHHHHHHcCCCeEEEE
Confidence 000011133333321 1245666655 56889865544
No 136
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=47.19 E-value=45 Score=33.36 Aligned_cols=110 Identities=10% Similarity=0.096 Sum_probs=61.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-CCceEEEEecccccc-ccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-NLPFEFHPVVDRLED-VRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-gVpFEF~~V~~~lE~-l~~~~ 471 (667)
.-+|+|+|.|.|. +...|+.+. +..+||+|+.+...++...+++...+..+ +-.++|. .....+ +..
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~-- 147 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKYK---SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLEN-- 147 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHH--
T ss_pred CCeEEEEeCCcCH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE--ECChHHHHHh--
Confidence 3589999999884 556666542 34799999999888877777654432222 1224442 211111 110
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChH--HHHHHHH-HhcCCcEEEEeeec
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVL--RDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l--~~fL~~I-RsL~PkVVVlvEqE 521 (667)
. -..=++|+++.....+. . ..+ ..|++.+ +.|+|.-++++...
T Consensus 148 ~-~~~fD~Ii~d~~~~~~~---~---~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 148 V-TNTYDVIIVDSSDPIGP---A---ETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp C-CSCEEEEEEECCCTTTG---G---GGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred C-CCCceEEEEcCCCCCCc---c---hhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 0 11125666665432211 1 112 5677776 56999977777644
No 137
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=46.93 E-value=1.3e+02 Score=28.43 Aligned_cols=105 Identities=11% Similarity=0.031 Sum_probs=55.5
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
..-+|+|+|.|.|. +...|+.+. + -++|||+.+...++.+.++ ++..+...+| +...++++..
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s~~~l~~a~~~----~~~~~~~v~~--~~~d~~~~~~--- 122 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECNDGVFQRLRDW----APRQTHKVIP--LKGLWEDVAP--- 122 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECCHHHHHHHHHH----GGGCSSEEEE--EESCHHHHGG---
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCCHHHHHHHHHH----HHhcCCCeEE--EecCHHHhhc---
Confidence 45689999999984 344455432 2 2899999999888776654 3344544444 3333333310
Q ss_pred ccCCC--cEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEE
Q 005954 473 HVKEK--ESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLM 517 (667)
Q Consensus 473 ~i~~g--EaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVl 517 (667)
.+.++ ++|+.+ .+.++ ..+......+.+|+.+ |-|+|.-+++
T Consensus 123 ~~~~~~fD~V~~d-~~~~~--~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 123 TLPDGHFDGILYD-TYPLS--EETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GSCTTCEEEEEEC-CCCCB--GGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred ccCCCceEEEEEC-Ccccc--hhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 12222 334331 22221 1111112334556554 6799996655
No 138
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=46.59 E-value=1e+02 Score=28.33 Aligned_cols=55 Identities=13% Similarity=0.133 Sum_probs=37.9
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
..+++.+.-.+.-+|+|+|.+.|..-.. |+.+ + -++|+|+.+...++.+.+++..
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~----la~~-~----~~v~~vD~~~~~~~~a~~~~~~ 121 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTAI----LAHL-V----QHVCSVERIKGLQWQARRRLKN 121 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHH----HHHH-S----SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHh-C----CEEEEEecCHHHHHHHHHHHHH
Confidence 3445666555667899999998864333 3333 1 4899999998888877776543
No 139
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=46.27 E-value=44 Score=33.33 Aligned_cols=53 Identities=6% Similarity=0.089 Sum_probs=39.2
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.|++++.-...-+|+|+|-|.|. |-..|+.+. -++|+|+.+.+.++...+++.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCHHHHHHHHHHHT
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCHHHHHHHHHHHh
Confidence 35666655555689999999986 556666653 379999999988877776654
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=46.13 E-value=32 Score=31.90 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=39.6
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
.+++.+.-...-.|+|+|.+.|.--..|.+.+ + |..++|+|+.+...++.+.+++..
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~-~~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV-----G-EDGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh-----C-CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555554555689999999887655555554 1 235899999998888777766554
No 141
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=46.04 E-value=73 Score=28.93 Aligned_cols=45 Identities=9% Similarity=-0.049 Sum_probs=31.4
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
..-.|+|+|.+.|.- ...|+.+ ++. ++|+|+.+...++.+.+++.
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESCHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCCHHHHHHHHHhcc
Confidence 345799999998853 3344444 222 89999999888877776654
No 142
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=45.99 E-value=63 Score=32.34 Aligned_cols=53 Identities=6% Similarity=0.067 Sum_probs=37.2
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRL 444 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL 444 (667)
+.|++++.-...-+|+|+|.|.|.--..|.+. + -++|||+.+...++.+.+++
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----~----~~v~~vD~~~~~~~~a~~~~ 70 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----A----KKVVACELDPRLVAELHKRV 70 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----S----SEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----C----CEEEEEECCHHHHHHHHHHH
Confidence 34555555445568999999999866665553 1 28999999988777666554
No 143
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=44.34 E-value=82 Score=30.54 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=35.9
Q ss_pred CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 391 GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 391 G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
..+...|+|+|.|.|. ++..||.+. |...++||+.+...++.+.+++...
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHH
Confidence 3456789999999885 445566553 2368999999999888887776554
No 144
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=43.96 E-value=78 Score=28.68 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=27.0
Q ss_pred EEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHH
Q 005954 396 HIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNE 439 (667)
Q Consensus 396 HIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~e 439 (667)
.|+|+|.|.|. +...|+.+. ++|||+.+...++.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLNIRALES 59 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESCHHHHHT
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECCHHHHhc
Confidence 89999999994 555666653 99999999887765
No 145
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=43.73 E-value=1.2e+02 Score=29.15 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=54.3
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
..-.|+|+|.|.|. +...|+.+ + .++|||+.+...++...++.. +. | +...++++
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~~~------~~---~--~~~d~~~~----- 108 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSKEMLEVAREKGV------KN---V--VEAKAEDL----- 108 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCHHHHHHHHHHTC------SC---E--EECCTTSC-----
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCHHHHHHHHhhcC------CC---E--EECcHHHC-----
Confidence 44689999999886 44556655 2 489999999887776655432 11 2 22223322
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
....+..=+|-|...++|+..+ ...+|+.+ +-|+|.-.+++.
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVEN-----KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhcccc-----HHHHHHHHHHHcCCCeEEEEE
Confidence 2222322123333334454322 45666665 568998555543
No 146
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=43.41 E-value=30 Score=30.15 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=33.8
Q ss_pred CCCeEEEeeeCCCh----HHHHHHHHHHHHHHHHcCCceEEE
Q 005954 421 PPSHVRITGIGESK----QELNETGDRLSGFAEALNLPFEFH 458 (667)
Q Consensus 421 gPP~LRITgI~~s~----~~L~etG~RL~~fA~slgVpFEF~ 458 (667)
+||.-|||....+. ..|+++-+.+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 89999999998875 368999999999999999999985
No 147
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=42.57 E-value=1.1e+02 Score=33.27 Aligned_cols=117 Identities=10% Similarity=0.042 Sum_probs=64.6
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHH---HHHHHHHHHcCCc---eE
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETG---DRLSGFAEALNLP---FE 456 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG---~RL~~fA~slgVp---FE 456 (667)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. + ..+++||+.+...++.+. +.+.+-++.+|+. ++
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~----g---~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC----G---CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH----C---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC----C---CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 456676655555689999999997665555443 1 248999999887666553 3334445566743 55
Q ss_pred EEEecccccccccccc--ccCCCcEEEEEeccchhhcccCCCCChHHH-HHHHHHhcCCcEEEEe
Q 005954 457 FHPVVDRLEDVRLWML--HVKEKESVAVNCIFQLHKTLYSGNGGVLRD-FLGLIRSTNPTIVLMA 518 (667)
Q Consensus 457 F~~V~~~lE~l~~~~L--~i~~gEaLAVN~~~~LH~lL~des~~~l~~-fL~~IRsL~PkVVVlv 518 (667)
|.. .+.+.+ .+.+ ....=++|++|..+ +. ..+.. +-.+.+.|+|.-.+++
T Consensus 305 ~i~-gD~~~~--~~~~~~~~~~FDvIvvn~~l-~~--------~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 305 FSL-KKSFVD--NNRVAELIPQCDVILVNNFL-FD--------EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp EEE-SSCSTT--CHHHHHHGGGCSEEEECCTT-CC--------HHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEE-cCcccc--ccccccccCCCCEEEEeCcc-cc--------ccHHHHHHHHHHhCCCCeEEEE
Confidence 531 112211 0000 01223567776543 11 12333 3455578999855544
No 148
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=42.50 E-value=1e+02 Score=31.09 Aligned_cols=110 Identities=11% Similarity=0.044 Sum_probs=61.7
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcC-CceEEEEecccccc-cccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALN-LPFEFHPVVDRLED-VRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slg-VpFEF~~V~~~lE~-l~~~~L 472 (667)
-+|+|+|.|.|. +...|+.+. +..+||+|+.+...++.+.+++..++..++ -.+++. .....+ +..
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~--- 159 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV--IANGAEYVRK--- 159 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHGGG---
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHHHHHhh---
Confidence 589999999885 556666653 346899999999988888887776654442 234443 211111 110
Q ss_pred ccCCCcEEEEEeccc-hhhcccCCCCChHHHHHHHH-HhcCCcEEEEeee
Q 005954 473 HVKEKESVAVNCIFQ-LHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQ 520 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~-LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEq 520 (667)
.-..=++|++|.... ++. .. .-....+++.+ +.|+|.-+++++.
T Consensus 160 ~~~~fD~Ii~d~~~~~~~~---~~-~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 160 FKNEFDVIIIDSTDPTAGQ---GG-HLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp CSSCEEEEEEEC--------------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCceEEEEcCCCcccCc---hh-hhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 001125666665321 110 00 00124667665 5799998777764
No 149
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=41.86 E-value=75 Score=28.32 Aligned_cols=108 Identities=13% Similarity=0.032 Sum_probs=58.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEeccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~ 471 (667)
.-+|+|+|.|.|.--. .++.+. .-++|||+.+...++.+.+++.. .+++ .+|. ...+.+.....
T Consensus 45 ~~~vLD~GcG~G~~~~----~~~~~~----~~~v~~vD~~~~~~~~a~~~~~~----~~~~~~~~~~--~~d~~~~~~~~ 110 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAI----EAVSRG----MDKSICIEKNFAALKVIKENIAI----TKEPEKFEVR--KMDANRALEQF 110 (187)
T ss_dssp SCEEEETTCTTCHHHH----HHHHTT----CSEEEEEESCHHHHHHHHHHHHH----HTCGGGEEEE--ESCHHHHHHHH
T ss_pred CCCEEEeCCccCHHHH----HHHHcC----CCEEEEEECCHHHHHHHHHHHHH----hCCCcceEEE--ECcHHHHHHHH
Confidence 3489999999886322 233332 25899999998888777666543 3543 4543 22222211100
Q ss_pred -cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH---HhcCCcEEEEeeecCCC
Q 005954 472 -LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI---RSTNPTIVLMAEQEAEH 524 (667)
Q Consensus 472 -L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I---RsL~PkVVVlvEqEadh 524 (667)
..-..=+.|+.|..+. . .....++..+ +-|+|.-+++++.....
T Consensus 111 ~~~~~~fD~i~~~~~~~--~-------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYA--K-------QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHTTCCEEEEEECCCGG--G-------CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhcCCCCCEEEECCCCC--c-------hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 0011114566665532 1 1123445444 55899977777665543
No 150
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=41.80 E-value=1.7e+02 Score=31.27 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=58.8
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHV 474 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i 474 (667)
-.|+|+|.|.|.-- ..||.+. -+++||+.+.+.++.+.+++ +..|+..+|. ...++++...
T Consensus 292 ~~VLDlgcG~G~~s----l~la~~~-----~~V~gvD~s~~ai~~A~~n~----~~ngl~v~~~--~~d~~~~~~~---- 352 (425)
T 2jjq_A 292 EKILDMYSGVGTFG----IYLAKRG-----FNVKGFDSNEFAIEMARRNV----EINNVDAEFE--VASDREVSVK---- 352 (425)
T ss_dssp SEEEEETCTTTHHH----HHHHHTT-----CEEEEEESCHHHHHHHHHHH----HHHTCCEEEE--ECCTTTCCCT----
T ss_pred CEEEEeeccchHHH----HHHHHcC-----CEEEEEECCHHHHHHHHHHH----HHcCCcEEEE--ECChHHcCcc----
Confidence 36899999988533 3455542 38999999998887776654 3456664443 3333332111
Q ss_pred CCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEee
Q 005954 475 KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMAE 519 (667)
Q Consensus 475 ~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlvE 519 (667)
.=++|++|-.. .+..+.+++.++.++|+-++.+.
T Consensus 353 -~fD~Vv~dPPr----------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 -GFDTVIVDPPR----------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp -TCSEEEECCCT----------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred -CCCEEEEcCCc----------cchHHHHHHHHHhcCCCcEEEEE
Confidence 22456654321 12234688899999999877775
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=41.70 E-value=65 Score=31.19 Aligned_cols=101 Identities=9% Similarity=0.128 Sum_probs=55.5
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~L 472 (667)
-.|+|+|.+.|.--.. |+.+- |+..+||+|+.+...++.+.+++ +..|++ .+|.. ....+.-. .+
T Consensus 65 ~~VLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~s~~~~~~a~~~~----~~~g~~~~v~~~~--~d~~~~l~-~~ 131 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIW----MAREL--PADGQLLTLEADAHHAQVARENL----QLAGVDQRVTLRE--GPALQSLE-SL 131 (248)
T ss_dssp SEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEEE--SCHHHHHH-TC
T ss_pred CEEEEecCCchHHHHH----HHHhC--CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEE--cCHHHHHH-hc
Confidence 4899999998865443 34332 22479999999988887766554 445664 55532 22111100 01
Q ss_pred c-cCCCcEEEEEeccchhhcccCCCCChHHHHHHH-HHhcCCcEEEEee
Q 005954 473 H-VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGL-IRSTNPTIVLMAE 519 (667)
Q Consensus 473 ~-i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~-IRsL~PkVVVlvE 519 (667)
. ...=+.|+++.. ......+|+. .+-|+|.-+++++
T Consensus 132 ~~~~~fD~V~~d~~-----------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 132 GECPAFDLIFIDAD-----------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CSCCCCSEEEECSC-----------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCCeEEEEECCc-----------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0 011234544431 1223445544 5779999777764
No 152
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=41.12 E-value=79 Score=29.91 Aligned_cols=47 Identities=17% Similarity=0.013 Sum_probs=32.4
Q ss_pred CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 391 GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 391 G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
..+.-.|+|+|.|.|.-= ..|+.+ ++ .+||||+.+...++.+.+++.
T Consensus 54 ~~~~~~vLDlGcG~G~~~----~~l~~~--~~--~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQ----LLSACE--SF--TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp SCCEEEEEEESCTTCCGG----GTTGGG--TE--EEEEEEESCHHHHHHHHHHHT
T ss_pred ccCCCEEEEECCCccHHH----HHHhhc--cc--CeEEEecCCHHHHHHHHHHHh
Confidence 356678999999988532 123332 21 689999999988877776653
No 153
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=40.58 E-value=1.7e+02 Score=29.52 Aligned_cols=112 Identities=8% Similarity=0.017 Sum_probs=62.0
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcC-CceEEEEecccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALN-LPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slg-VpFEF~~V~~~lE~l~~~~L 472 (667)
.-.|+|+|.|.|. +...|+.+. +..+||+|+.+...++...+++...++.++ -.++|. .....++... .
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~~~~-~ 165 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRHG---TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGLAFVRQ-T 165 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTCT---TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHS-S
T ss_pred CCeEEEEcCCCCH----HHHHHHhCC---CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHHh-c
Confidence 3579999999885 556666542 346999999999988888887766555432 234443 2211111000 0
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChH--HHHHHHH-HhcCCcEEEEeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVL--RDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l--~~fL~~I-RsL~PkVVVlvEqE 521 (667)
.-..=++|++|... +.. .. ..+ ..||+.+ +.|+|.-++++..+
T Consensus 166 ~~~~fDvIi~d~~~--~~~-~~---~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 166 PDNTYDVVIIDTTD--PAG-PA---SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp CTTCEEEEEEECC---------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCceeEEEECCCC--ccc-cc---hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 01112566666543 211 11 111 4677665 67999977666543
No 154
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=40.11 E-value=2.1e+02 Score=26.38 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=55.2
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-.|+|+|.+.|.--..|.+.. + ++|||+.+...++...+++. + .+|. ...++++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~------~---~v~~~D~s~~~~~~a~~~~~------~--~~~~--~~d~~~~----- 95 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF------G---DTAGLELSEDMLTHARKRLP------D--ATLH--QGDMRDF----- 95 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH------S---EEEEEESCHHHHHHHHHHCT------T--CEEE--ECCTTTC-----
T ss_pred CCCeEEEecccCCHHHHHHHHhC------C---cEEEEeCCHHHHHHHHHhCC------C--CEEE--ECCHHHc-----
Confidence 44689999999986444343332 1 89999999887776655431 2 3332 2222222
Q ss_pred ccCCCc-EEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 473 HVKEKE-SVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 473 ~i~~gE-aLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
.. ++. -+||.+.-.||++.. . ..+..+|+.+ +.|+|.-.++.+
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~~-~--~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLKT-T--EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCCS-H--HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc-CCCCcEEEEcCchHhhcCC-H--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 12 222 233423336677531 1 2345667665 568999766665
No 155
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=39.53 E-value=31 Score=35.46 Aligned_cols=94 Identities=13% Similarity=0.204 Sum_probs=57.0
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEeccc
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDR 463 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~ 463 (667)
.+++.+.-...=+|+|+|.|.|..-..|++.+. ..++|||+.+.+.++.+.+++..+ |-.++| +...
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-------~~~VigvD~d~~al~~A~~~~~~~----g~~v~~--v~~d 83 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-------GCRIIGIDVDSEVLRIAEEKLKEF----SDRVSL--FKVS 83 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-------TCEEEEEESCHHHHHHHHHHTGGG----TTTEEE--EECC
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-------CCEEEEEECCHHHHHHHHHHHHhc----CCcEEE--EECC
Confidence 344555433344899999999988777776651 258999999999999888887654 323444 3334
Q ss_pred cccccc--cccccCCCcEEEEEeccchhh
Q 005954 464 LEDVRL--WMLHVKEKESVAVNCIFQLHK 490 (667)
Q Consensus 464 lE~l~~--~~L~i~~gEaLAVN~~~~LH~ 490 (667)
++++.. ..+.+..=+.|+++..+.-++
T Consensus 84 ~~~l~~~l~~~g~~~~D~Vl~D~gvSs~q 112 (301)
T 1m6y_A 84 YREADFLLKTLGIEKVDGILMDLGVSTYQ 112 (301)
T ss_dssp GGGHHHHHHHTTCSCEEEEEEECSCCHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCccchhh
Confidence 444431 111112224666666544443
No 156
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=39.12 E-value=41 Score=30.90 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=32.0
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
+.-.|+|+|.|.|. +...|+.+. .-++|||+.+...++.+.+++.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~~----~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLLG----AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHTT----BSEEEEEESCHHHHHHHHHHCT
T ss_pred CCCEEEEEeCCccH----HHHHHHHcC----CCEEEEEECCHHHHHHHHHhcC
Confidence 33579999999987 444555541 2479999999888877666543
No 157
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=38.77 E-value=65 Score=32.10 Aligned_cols=109 Identities=6% Similarity=0.062 Sum_probs=59.2
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc--------CCceEEEEecccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL--------NLPFEFHPVVDRLED 466 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl--------gVpFEF~~V~~~lE~ 466 (667)
-+|+|+|.|.| .+...|+.+ + ..+||+|+.+...++...+++ +.+..+ +-.++|..- +-.+-
T Consensus 77 ~~VLdiG~G~G----~~~~~l~~~-~---~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~-D~~~~ 146 (281)
T 1mjf_A 77 KRVLVIGGGDG----GTVREVLQH-D---VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIG-DGFEF 146 (281)
T ss_dssp CEEEEEECTTS----HHHHHHTTS-C---CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEES-CHHHH
T ss_pred CeEEEEcCCcC----HHHHHHHhC-C---CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEEC-chHHH
Confidence 47999999988 456666665 2 368999999998888777766 332111 122444311 11111
Q ss_pred ccccccccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 467 VRLWMLHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 467 l~~~~L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
+. .-..=++|+++...... .... -....|++.+ +.|+|.-++++...
T Consensus 147 l~----~~~~fD~Ii~d~~~~~~---~~~~-l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 147 IK----NNRGFDVIIADSTDPVG---PAKV-LFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HH----HCCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc----ccCCeeEEEECCCCCCC---cchh-hhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 11 00112556666543210 0000 0125567665 57899977777644
No 158
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=38.65 E-value=85 Score=32.66 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=60.6
Q ss_pred CCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC--ceEEEEeccccccccc
Q 005954 392 KDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL--PFEFHPVVDRLEDVRL 469 (667)
Q Consensus 392 ~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV--pFEF~~V~~~lE~l~~ 469 (667)
...-.|+|+|.|.|. +.-.+|.+.. .-+|+|++.+...++.+.+++. ..|+ ..+|.. ....++..
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~~~---~~~v~g~Dis~~~l~~A~~n~~----~~gl~~~i~~~~--~D~~~~~~ 282 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALRRY---SGEIIGIEKYRKHLIGAEMNAL----AAGVLDKIKFIQ--GDATQLSQ 282 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHTTC---CSCEEEEESCHHHHHHHHHHHH----HTTCGGGCEEEE--CCGGGGGG
T ss_pred CCCCEEEEccCcCcH----HHHHHHHhCC---CCeEEEEeCCHHHHHHHHHHHH----HcCCCCceEEEE--CChhhCCc
Confidence 344579999999985 4444454421 2379999999988887777653 4566 455532 22222221
Q ss_pred cccccCCCcEEEEEeccchhhcccCCCCCh-HHHHHHHHHh-cCCcEEEEe
Q 005954 470 WMLHVKEKESVAVNCIFQLHKTLYSGNGGV-LRDFLGLIRS-TNPTIVLMA 518 (667)
Q Consensus 470 ~~L~i~~gEaLAVN~~~~LH~lL~des~~~-l~~fL~~IRs-L~PkVVVlv 518 (667)
....=+.|+.|-.|... +-....... .+.+++.++. |++.+++++
T Consensus 283 ---~~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 283 ---YVDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp ---TCSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---ccCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 11223578888777542 111110011 2557777766 666666654
No 159
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=38.65 E-value=1.5e+02 Score=27.85 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=54.6
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~~L 472 (667)
-+|+|+|.+.|.-=..|.+.+ + ..+||+|+.+...++.+.+++. ..|+. ++|. .....+.-....
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~---~----~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~--~~d~~~~~~~~~ 122 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQAL---P----EATIVSIERDERRYEEAHKHVK----ALGLESRIELL--FGDALQLGEKLE 122 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHC---T----TCEEEEECCCHHHHHHHHHHHH----HTTCTTTEEEE--CSCGGGSHHHHT
T ss_pred CEEEEecCCCcHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE--ECCHHHHHHhcc
Confidence 379999999886433333332 1 3689999999888877766554 34552 4443 222222100000
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHH-HHhcCCcEEEEee
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGL-IRSTNPTIVLMAE 519 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~-IRsL~PkVVVlvE 519 (667)
.-..=+.|+++... + ....+|+. .+.|+|.-+++++
T Consensus 123 ~~~~fD~I~~~~~~--~---------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 123 LYPLFDVLFIDAAK--G---------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp TSCCEEEEEEEGGG--S---------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCccEEEECCCH--H---------HHHHHHHHHHHHcCCCeEEEEE
Confidence 00111445554432 1 23455544 4679999777765
No 160
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=37.47 E-value=43 Score=29.36 Aligned_cols=103 Identities=8% Similarity=-0.032 Sum_probs=55.9
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHV 474 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L~i 474 (667)
-+|+|+|.|.|. +...|+.+ ++ . +|||+.+...++.+.+++.. .++..+|. ...+.+... .+.-
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~~~-~~~~ 106 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDPEAVRLLKENVRR----TGLGARVV--ALPVEVFLP-EAKA 106 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCHHHHHHHHHHHHH----HTCCCEEE--CSCHHHHHH-HHHH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCHHHHHHHHHHHHH----cCCceEEE--eccHHHHHH-hhhc
Confidence 479999999995 44445554 22 2 99999998888777666543 34433432 222222110 0000
Q ss_pred C--CCcEEEEEeccchhhcccCCCCChHHHHHHHH---HhcCCcEEEEeeecCC
Q 005954 475 K--EKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI---RSTNPTIVLMAEQEAE 523 (667)
Q Consensus 475 ~--~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I---RsL~PkVVVlvEqEad 523 (667)
. .=+.|+.|..+. . + ...++..+ +-|+|.-+++++....
T Consensus 107 ~~~~~D~i~~~~~~~--~---~-----~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 107 QGERFTVAFMAPPYA--M---D-----LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp TTCCEEEEEECCCTT--S---C-----TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred cCCceEEEEECCCCc--h---h-----HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 0 114555555442 1 1 12344444 5689997777766544
No 161
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=36.86 E-value=32 Score=31.60 Aligned_cols=96 Identities=15% Similarity=0.071 Sum_probs=55.3
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEeccccccccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLWMLH 473 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~~L~ 473 (667)
-+|+|+|.|.|.--..|.+.+ |..++|+|+.+...++.+.+++ +..+++ ++|. ...++++...
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~--~~d~~~~~~~--- 130 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGKRVRFLRQVQ----HELKLENIEPV--QSRVEEFPSE--- 130 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHH----HHTTCSSEEEE--ECCTTTSCCC---
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHHH----HHcCCCCeEEE--ecchhhCCcc---
Confidence 489999999997665555543 2368999999988776666554 345664 5543 2233322110
Q ss_pred cCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 474 VKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 474 i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..=+.|+.|. + .....+|..+ +-|+|.-+++++
T Consensus 131 -~~~D~i~~~~---~---------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 131 -PPFDGVISRA---F---------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp -SCEEEEECSC---S---------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred -CCcCEEEEec---c---------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 0112232221 1 1245666665 458898766665
No 162
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=36.86 E-value=57 Score=31.11 Aligned_cols=57 Identities=5% Similarity=-0.032 Sum_probs=38.8
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
.|++.+.-...-.|+|+|.+.|.--..|.+.+. |..++++|+.+.+.++.+.+++..
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~------~~~~v~~~D~~~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVG------PEGRVVSYEIREDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhC------CCeEEEEEecCHHHHHHHHHHHHH
Confidence 455665555556899999999854444444331 236899999999888777766554
No 163
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=36.81 E-value=3.2e+02 Score=26.88 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=29.1
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCC-ChHHHHHHHHHH
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGE-SKQELNETGDRL 444 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~-s~~~L~etG~RL 444 (667)
-.|+|+|.|.|.- + ..|+.+. .-++|+|+. +...++.+.+++
T Consensus 81 ~~vLDlG~G~G~~--~--~~~a~~~----~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 81 KTVCELGAGAGLV--S--IVAFLAG----ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp CEEEETTCTTSHH--H--HHHHHTT----CSEEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEecccccHH--H--HHHHHcC----CCEEEEEeCCCHHHHHHHHHHH
Confidence 4799999998852 2 2455442 138999999 788777766654
No 164
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=36.67 E-value=43 Score=30.25 Aligned_cols=43 Identities=23% Similarity=0.293 Sum_probs=32.1
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
-+|+|+|.|.|.- ...|+.+ ..++|||+.+...++.+.+++.+
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s~~~l~~a~~~~~~ 66 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECCHHHHHHHHHHHHH
Confidence 3799999999863 3345655 25899999999888877776653
No 165
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=35.86 E-value=2.1e+02 Score=28.32 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=63.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCC-ceEEEEeccc-cccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNL-PFEFHPVVDR-LEDVRLWM 471 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgV-pFEF~~V~~~-lE~l~~~~ 471 (667)
.-+|+|+|.|.|. +...++.++ +.-+||+|+.+...++.+.+++..++..++- .+++. ... .+-+..
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l~~-- 144 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ--VDDGFMHIAK-- 144 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE--ESCSHHHHHT--
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHHHHHhh--
Confidence 4579999999884 556666653 3468999999999888888877766543422 24443 221 111110
Q ss_pred cccCCCcEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEeeec
Q 005954 472 LHVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAEQE 521 (667)
Q Consensus 472 L~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvEqE 521 (667)
.-..=++|+++... +.. ... .-...+|++.+ +.|+|.-++++...
T Consensus 145 -~~~~fD~Ii~d~~~--~~~-~~~-~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 145 -SENQYDVIMVDSTE--PVG-PAV-NLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp -CCSCEEEEEESCSS--CCS-CCC-CCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred -CCCCeeEEEECCCC--CCC-cch-hhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 00122566665543 111 100 00124566555 67999988877643
No 166
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=35.38 E-value=1.1e+02 Score=30.92 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=39.1
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDR 443 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~R 443 (667)
.|++++.-...-+|+|+|-|.|.-=..|.+....+ ..++|||+.+.+.++...++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~-----~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATP-----GSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBT-----TBCEEEEECCHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCc-----CCeEEEEECCHHHHHHHHHh
Confidence 35566655556689999999998766666553211 25699999998887777665
No 167
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=35.04 E-value=74 Score=31.32 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=30.6
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGD 442 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~ 442 (667)
..-.|+|+|.|.|. ++..||.+ | .++|||+.+...++.+.+
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S~~~i~~a~~ 108 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEISEIGIREFFA 108 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECCHHHHHHHHH
Confidence 45689999999885 34567765 2 489999999988876543
No 168
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=34.74 E-value=59 Score=32.88 Aligned_cols=71 Identities=10% Similarity=0.035 Sum_probs=49.6
Q ss_pred CccchhhhhhhHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHH
Q 005954 372 PIPKFIHFTANEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFA 448 (667)
Q Consensus 372 Pf~kFAhftANqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA 448 (667)
+-.++.|-+....|++.+.-...-.|+|+|.+.|.-=..|.+.+ + |.-++++|+.+...++.+.+++..+-
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~----g--~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV----G--SQGRVISFEVRKDHHDLAKKNYKHWR 154 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH----C--TTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh----C--CCceEEEEeCCHHHHHHHHHHHHHhh
Confidence 44455666656677777755555689999999986444444433 1 23589999999998888888877654
No 169
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=34.11 E-value=78 Score=33.64 Aligned_cols=109 Identities=17% Similarity=0.233 Sum_probs=57.8
Q ss_pred HHHHHh---hCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEE
Q 005954 383 EMLLRA---FDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHP 459 (667)
Q Consensus 383 qAILEA---~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~ 459 (667)
.||+.+ ++|+ +|+|+|.|.| +.++ +|.|.|. -+++||+.+. +-+.. .+.++..|+.=....
T Consensus 73 ~Ai~~~~~~~~~k---~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~--~~~~a---~~~~~~n~~~~~i~~ 136 (376)
T 4hc4_A 73 LGILRNWAALRGK---TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASA--IWQQA---REVVRFNGLEDRVHV 136 (376)
T ss_dssp HHHHTTHHHHTTC---EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECST--THHHH---HHHHHHTTCTTTEEE
T ss_pred HHHHhCHHhcCCC---EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChH--HHHHH---HHHHHHcCCCceEEE
Confidence 455442 4454 5889888877 3344 4445442 3799999764 22233 334555666544444
Q ss_pred eccccccccccccccCCC-cEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEE
Q 005954 460 VVDRLEDVRLWMLHVKEK-ESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLM 517 (667)
Q Consensus 460 V~~~lE~l~~~~L~i~~g-EaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVl 517 (667)
+...++++.. .+. ++|+-+++ ...|..+ +.+..+|... |-|+|.-+++
T Consensus 137 i~~~~~~~~l-----pe~~DvivsE~~---~~~l~~e--~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 137 LPGPVETVEL-----PEQVDAIVSEWM---GYGLLHE--SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp EESCTTTCCC-----SSCEEEEECCCC---BTTBTTT--CSHHHHHHHHHHHEEEEEEEE
T ss_pred EeeeeeeecC-----CccccEEEeecc---ccccccc--chhhhHHHHHHhhCCCCceEC
Confidence 5556665542 111 22222222 1223333 4577888777 6688886655
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=33.80 E-value=69 Score=29.93 Aligned_cols=61 Identities=13% Similarity=0.091 Sum_probs=39.3
Q ss_pred HHHHhhC--CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 384 MLLRAFD--GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 384 AILEA~e--G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
.+++.+. -...-+|+|+|.+.|..-..|.+.+..+ ..|..++|+|+.+...++.+.+++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~~~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLERVKDLVNFSLENIKR 131 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4555553 2344589999999986544444433211 11346999999999888877776654
No 171
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=32.82 E-value=66 Score=30.03 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=38.7
Q ss_pred HHHHhhC--CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHH
Q 005954 384 MLLRAFD--GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSG 446 (667)
Q Consensus 384 AILEA~e--G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~ 446 (667)
.+++.+. -...-+|+|+|.+.|..-..|.+.+ + +..++|+|+.+...++.+.+++.+
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~----~--~~~~v~~vD~s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV----G--CTGKVIGIDHIKELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH----C--TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh----C--CCcEEEEEeCCHHHHHHHHHHHHh
Confidence 4556554 2345689999999887555454443 1 235899999998888877766654
No 172
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=32.66 E-value=67 Score=30.43 Aligned_cols=59 Identities=7% Similarity=0.108 Sum_probs=38.9
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
..|++.+.-...-+|+|+|.+.|.--..|.+.+ + |..++|+|+.+...++.+.+++..+
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~--~~~~v~~~D~~~~~~~~a~~~~~~~ 144 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV----G--EKGLVESYEARPHHLAQAERNVRAF 144 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH----C--TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh----C--CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 345666554455689999999885433333333 1 2248999999998887777765543
No 173
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=32.29 E-value=1.2e+02 Score=29.31 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=47.2
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEEEecccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFHPVVDRLEDVRLW 470 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~~V~~~lE~l~~~ 470 (667)
+.-.|+|+|.|.|. +...|+.+.. . +||||+.+...++.+.+++. ..++. ++| +...+.++..
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi~~~~~~~a~~n~~----~~~~~~~v~~--~~~D~~~~~~- 113 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEIQERLADMAKRSVA----YNQLEDQIEI--IEYDLKKITD- 113 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECCSHHHHHHHHHHHH----HTTCTTTEEE--ECSCGGGGGG-
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEECCHHHHHHHHHHHH----HCCCcccEEE--EECcHHHhhh-
Confidence 35689999999984 4556677632 2 89999999888877766543 44554 444 3333333321
Q ss_pred ccccCCCcEEEEEecc
Q 005954 471 MLHVKEKESVAVNCIF 486 (667)
Q Consensus 471 ~L~i~~gEaLAVN~~~ 486 (667)
.+.-..=+.|+.|-.+
T Consensus 114 ~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 114 LIPKERADIVTCNPPY 129 (259)
T ss_dssp TSCTTCEEEEEECCCC
T ss_pred hhccCCccEEEECCCC
Confidence 0111122567777665
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=31.81 E-value=75 Score=30.72 Aligned_cols=59 Identities=8% Similarity=0.113 Sum_probs=39.3
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
..|++.+.-...-.|+|+|.+.|.--..|.+.+ + |..++++|+.+.+.++.+.+++..+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~--~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAV----G--PAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH----C--TTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHh----C--CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 356666554445579999999886433333333 1 2358999999998888877766544
No 175
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=31.80 E-value=83 Score=31.74 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=37.8
Q ss_pred HHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 383 qAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
+.|++++.-...-.|+|+|.|.|.-- ..|+.+. -++|||+.+...++.+.+++.
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~~-----~~v~~vDi~~~~~~~a~~~~~ 85 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPLA-----KKVITIDIDSRMISEVKKRCL 85 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTTS-----SEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhcC-----CEEEEEECCHHHHHHHHHHHH
Confidence 44556665445558999999999744 4555552 389999999888877766653
No 176
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=31.53 E-value=3.2e+02 Score=28.67 Aligned_cols=108 Identities=14% Similarity=0.124 Sum_probs=61.8
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEEEecccccccccccc
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~~V~~~lE~l~~~~L 472 (667)
+.-+|+|+|.|.|.- ...|+.+ + .+||+|+.+...++.+.+++. ..++..+|.. ..+.+...
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~-g----~~V~gvDis~~al~~A~~n~~----~~~~~v~~~~--~D~~~~~~--- 294 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM-G----AEVVGVEDDLASVLSLQKGLE----ANALKAQALH--SDVDEALT--- 294 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT-T----CEEEEEESBHHHHHHHHHHHH----HTTCCCEEEE--CSTTTTSC---
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc-C----CEEEEEECCHHHHHHHHHHHH----HcCCCeEEEE--cchhhccc---
Confidence 445899999999964 3334444 2 389999999888877776653 4566656542 22222211
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChHHHHHHH-HHhcCCcEEEEeeec
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVLRDFLGL-IRSTNPTIVLMAEQE 521 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~-IRsL~PkVVVlvEqE 521 (667)
.-..=+.|+.|..| |+.. .........+|+. .+-|+|.-.+++..+
T Consensus 295 ~~~~fD~Ii~npp~--~~~~-~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 295 EEARFDIIVTNPPF--HVGG-AVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TTCCEEEEEECCCC--CTTC-SSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCeEEEEECCch--hhcc-cccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 00112456666554 4321 1111234556655 467999976666544
No 177
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=29.91 E-value=57 Score=32.91 Aligned_cols=66 Identities=6% Similarity=0.070 Sum_probs=41.8
Q ss_pred hHHHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEE
Q 005954 382 NEMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEF 457 (667)
Q Consensus 382 NqAILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF 457 (667)
-..+++.+.-...-+|+|+|.|.|. +...|+.+- +...++|||+.+.+.++.+.+++. ..|++ .+|
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~~~~~a~~~~~----~~g~~~v~~ 130 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRVV--GEKGLVVSVEYSRKICEIAKRNVE----RLGIENVIF 130 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHH--CTTCEEEEEESCHHHHHHHHHHHH----HTTCCSEEE
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHhc--CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCeEE
Confidence 3455666655555689999998885 333444331 123589999999888877666543 44553 444
No 178
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=29.26 E-value=55 Score=31.35 Aligned_cols=55 Identities=13% Similarity=0.045 Sum_probs=39.2
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
+..+|+|+|.|.|.--..|.+... ..++|||+.+...++.+.+++. ..|+. ++|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~ 121 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------GWYFLATEVDDMCFNYAKKNVE----QNNLSDLIKVV 121 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------CCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------CCeEEEEECCHHHHHHHHHHHH----HcCCCccEEEE
Confidence 345899999999976666655442 2689999999988887776654 35654 5654
No 179
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=28.81 E-value=99 Score=29.05 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=41.5
Q ss_pred HHHHhhC--CCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHH
Q 005954 384 MLLRAFD--GKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGF 447 (667)
Q Consensus 384 AILEA~e--G~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~f 447 (667)
.+++.+. -...-+|+|+|.+.|..-..|.+.+... +..+..++|+|+.+.+.++.+.+++.+.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAK-GVDADTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHS-CCCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccc-cCCccCEEEEEEcCHHHHHHHHHHHHhc
Confidence 3455553 2334589999999887655555544321 1223358999999998888888777654
No 180
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=28.78 E-value=1.3e+02 Score=30.83 Aligned_cols=67 Identities=9% Similarity=0.087 Sum_probs=40.4
Q ss_pred cCCccchhh-hhhhHHH----HHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHH
Q 005954 370 ATPIPKFIH-FTANEML----LRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRL 444 (667)
Q Consensus 370 ~sPf~kFAh-ftANqAI----LEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL 444 (667)
+.|-.+|++ |..+..| ++++.-...-+|+|+|-|.|..-..|.+ +. -++|+|+.+.+.++...+++
T Consensus 22 ~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~----~~-----~~V~aVEid~~li~~a~~~~ 92 (295)
T 3gru_A 22 FKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAK----NA-----KKVYVIEIDKSLEPYANKLK 92 (295)
T ss_dssp --------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHH----HS-----SEEEEEESCGGGHHHHHHHH
T ss_pred CCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHh----cC-----CEEEEEECCHHHHHHHHHHh
Confidence 344455555 5555554 4455545556899999999975544444 31 37999999988777777665
Q ss_pred H
Q 005954 445 S 445 (667)
Q Consensus 445 ~ 445 (667)
.
T Consensus 93 ~ 93 (295)
T 3gru_A 93 E 93 (295)
T ss_dssp H
T ss_pred c
Confidence 5
No 181
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=28.74 E-value=72 Score=31.19 Aligned_cols=61 Identities=10% Similarity=0.148 Sum_probs=38.6
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEE
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEF 457 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF 457 (667)
+++.+. .+..+|+|+|.|.|.-=..|.+.+ |..++|+|+.+...++.+.+++. ..|++ .+|
T Consensus 102 ~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~-------~~~~v~~vD~s~~~l~~a~~n~~----~~~~~~v~~ 163 (276)
T 2b3t_A 102 ALARLP-EQPCRILDLGTGTGAIALALASER-------PDCEIIAVDRMPDAVSLAQRNAQ----HLAIKNIHI 163 (276)
T ss_dssp HHHHSC-SSCCEEEEETCTTSHHHHHHHHHC-------TTSEEEEECSSHHHHHHHHHHHH----HHTCCSEEE
T ss_pred HHHhcc-cCCCEEEEecCCccHHHHHHHHhC-------CCCEEEEEECCHHHHHHHHHHHH----HcCCCceEE
Confidence 334343 344689999999986433333322 23689999999988877776644 34654 444
No 182
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=28.26 E-value=2.2e+02 Score=26.75 Aligned_cols=41 Identities=5% Similarity=0.052 Sum_probs=26.5
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHH
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNET 440 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~et 440 (667)
.-+|+|+|.+.|.- ...|+.+-+ |.-+++||+.+...+++.
T Consensus 78 ~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s~~~i~~~ 118 (233)
T 2ipx_A 78 GAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFSHRSGRDL 118 (233)
T ss_dssp TCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCCHHHHHHH
T ss_pred CCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHH
Confidence 44899999999863 334444321 124899999987655443
No 183
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=28.16 E-value=61 Score=31.09 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=37.6
Q ss_pred hCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc
Q 005954 389 FDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP 454 (667)
Q Consensus 389 ~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp 454 (667)
...++.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+...++.+.+++ +..|+.
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~~~~~a~~~~----~~~g~~ 107 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESEHQRQAKALF----REAGYS 107 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHHHHHHHHHHH----HHTTCC
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHH----HHcCCC
Confidence 344445689999998887555555554 22358999999988777665543 455665
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=27.50 E-value=65 Score=30.00 Aligned_cols=54 Identities=11% Similarity=0.119 Sum_probs=35.8
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
-+|+|+|.+.|.--. .|+.+- |+..+||+|+.+...++.+.+++ +..|+. .+|.
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~ 121 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEKSTALAKEYW----EKAGLSDKIGLR 121 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHHHHHHHHHHH----HHCCCCCceEEE
Confidence 389999999886433 344432 22478999999988887776654 345554 5553
No 185
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=26.88 E-value=61 Score=31.79 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=34.3
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRL 444 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL 444 (667)
.|++.+.-...-.|+|+|.+.|.--..|.+.+ .|..++|+|+.+...++.+.+++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVERDEDNLKKAMDNL 155 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEECCHHHHHHHHHHH
Confidence 45555544455689999999886444444433 12358999999988887766654
No 186
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=26.52 E-value=78 Score=29.55 Aligned_cols=42 Identities=7% Similarity=0.030 Sum_probs=30.6
Q ss_pred CeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHH
Q 005954 393 DRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDR 443 (667)
Q Consensus 393 ~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~R 443 (667)
+.-+|+|+|.|.|.- ...||.+ + .++|||+.+...++.+.++
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCCHHHHHHHHHH
Confidence 445899999998853 3445554 2 4899999999888776654
No 187
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=25.44 E-value=81 Score=29.45 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=35.7
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.|++.+.-...-+|+|+|.|.|.--..|.+.. -++|+|+.+...++.+.+++.
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---------~~v~~vD~~~~~~~~a~~~~~ 113 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---------DKVVSVEINEKMYNYASKLLS 113 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---------CEEEEEeCCHHHHHHHHHHHh
Confidence 45555544455689999999887444333322 489999999888777666543
No 188
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=25.37 E-value=83 Score=30.65 Aligned_cols=50 Identities=10% Similarity=0.137 Sum_probs=34.3
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEE
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEF 457 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF 457 (667)
-+|+|+|.|.|. +...++.+ ++ ++|||+.+...++.+.+++ +..|+.++|
T Consensus 122 ~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~~v~~a~~n~----~~~~~~v~~ 171 (254)
T 2nxc_A 122 DKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPMVLPQAEANA----KRNGVRPRF 171 (254)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGGGHHHHHHHH----HHTTCCCEE
T ss_pred CEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHHHHHHHHHHH----HHcCCcEEE
Confidence 479999999886 33445553 33 9999999988877776654 345665444
No 189
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=25.08 E-value=80 Score=29.55 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=32.5
Q ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHcccCCCCCC
Q 005954 281 NGFELVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGS 320 (667)
Q Consensus 281 ~~l~Lv~LLl~CAeAV~~gd~~~A~~lL~~L~~laSp~Gd 320 (667)
..-++.+-|-+|++++++||...|+.||..- .+.-|+||
T Consensus 54 Gr~EIW~ALraA~~~~e~~Dl~tAQ~IldaA-gItvp~gd 92 (137)
T 2ksn_A 54 GRKEIWDALKAAAHAFESNDHELAQAIIDGA-NITLPHGA 92 (137)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-SCBCSSCC
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHc-CCcccCCc
Confidence 4457899999999999999999999999654 45568887
No 190
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=24.11 E-value=1e+02 Score=30.03 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.|++.+.-...-.|+|+|.+.|.- ...|+.+-+ |..++|+|+.+...++.+.+++.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~~--~~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAVG--SSGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHTT--TTCEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHHHHHHH
Confidence 455555444445899999999853 333443311 23589999999888877766554
No 191
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=24.01 E-value=73 Score=30.22 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=36.9
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.+++.+.-...-.|+|+|.|.|..-..|.+... .++|+|+.+...++.+.+++.
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIVK--------TDVYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--------SCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--------CEEEEEeCCHHHHHHHHHHHH
Confidence 455655444455799999998865444444431 479999999888877766654
No 192
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=23.72 E-value=67 Score=31.73 Aligned_cols=52 Identities=8% Similarity=0.121 Sum_probs=36.8
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDR 443 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~R 443 (667)
.|++++.-...-+|+|+|-|.|. |...|+.+. .-++|||+.+...++...++
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCHHHHHHHTTS
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCHHHHHHHHhc
Confidence 35555554555689999998875 677888772 35899999988766555443
No 193
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=23.46 E-value=72 Score=31.08 Aligned_cols=53 Identities=15% Similarity=0.153 Sum_probs=35.4
Q ss_pred HHHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHH
Q 005954 384 MLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLS 445 (667)
Q Consensus 384 AILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~ 445 (667)
.|++++.-...-+|+|+|.|.|.- ...|+.+. -++|||+.+.+.++.+.+++.
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~l----t~~l~~~~-----~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHF----TLELVQRC-----NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHH----HHHHHHHS-----SEEEEECSCHHHHHHHHHHTT
T ss_pred HHHHhCCCCCCCEEEEEeCCchHH----HHHHHHcC-----CeEEEEECCHHHHHHHHHhhc
Confidence 344444434456899999999964 34444442 479999999887776665543
No 194
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=23.34 E-value=85 Score=29.19 Aligned_cols=54 Identities=20% Similarity=0.205 Sum_probs=35.0
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc--eEEE
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP--FEFH 458 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp--FEF~ 458 (667)
-+|+|+|.+.|.--. .|+.+- |+..+||+|+.+...++.+.+++ +..|++ .+|.
T Consensus 60 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~ 115 (223)
T 3duw_A 60 RNILEIGTLGGYSTI----WLARGL--SSGGRVVTLEASEKHADIARSNI----ERANLNDRVEVR 115 (223)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CSSCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CEEEEecCCccHHHH----HHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE
Confidence 479999998885333 344432 22459999999988887766654 345653 4543
No 195
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=23.23 E-value=1.4e+02 Score=24.82 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=22.5
Q ss_pred CCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCceEEE
Q 005954 422 PSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFH 458 (667)
Q Consensus 422 PP~LRITgI~~s~~~L~etG~RL~~fA~slgVpFEF~ 458 (667)
--.+|||||. ...-.+....--+.|+.+||...|.
T Consensus 41 dleiritgvp--eqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 41 DLEIRITGVP--EQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp CEEEEEESCC--HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eeEEEEecCh--HHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 3468999984 3333444444445678888888775
No 196
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=23.18 E-value=1.7e+02 Score=29.76 Aligned_cols=112 Identities=17% Similarity=0.094 Sum_probs=59.4
Q ss_pred HHHhhCCCCeEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEeccc
Q 005954 385 LLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDR 463 (667)
Q Consensus 385 ILEA~eG~~~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~ 463 (667)
|++...-...-.|+|.+.|.|. +.-.+|.+.+ |..+|+|++.+...++.+.+++ +..|++ .+|. ...
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~~--~~~~v~g~Di~~~~i~~a~~n~----~~~g~~~i~~~--~~D 262 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTLG--PTSPVYAGDLDEKRLGLAREAA----LASGLSWIRFL--RAD 262 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHHC--TTSCEEEEESCHHHHHHHHHHH----HHTTCTTCEEE--ECC
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhhC--CCceEEEEECCHHHHHHHHHHH----HHcCCCceEEE--eCC
Confidence 3444433445579999999995 2333333211 2468999999998887776654 445664 3432 223
Q ss_pred cccccccccccCCCcEEEEEeccchhhcccCCC-C-ChHHHHHHHHH-hcCCc
Q 005954 464 LEDVRLWMLHVKEKESVAVNCIFQLHKTLYSGN-G-GVLRDFLGLIR-STNPT 513 (667)
Q Consensus 464 lE~l~~~~L~i~~gEaLAVN~~~~LH~lL~des-~-~~l~~fL~~IR-sL~Pk 513 (667)
+.++.. ....-++|+.|-.+... + .+.. . .....+++.++ -|+|.
T Consensus 263 ~~~~~~---~~~~~D~Ii~npPyg~r-~-~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 263 ARHLPR---FFPEVDRILANPPHGLR-L-GRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp GGGGGG---TCCCCSEEEECCCSCC------CHHHHHHHHHHHHHHHHTSCTT
T ss_pred hhhCcc---ccCCCCEEEECCCCcCc-c-CCcccHHHHHHHHHHHHHHhcCCC
Confidence 333321 11122688888777432 1 1110 0 01245676654 56785
No 197
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=22.11 E-value=2.4e+02 Score=28.83 Aligned_cols=131 Identities=9% Similarity=0.116 Sum_probs=66.2
Q ss_pred EEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHc-CCceEEEEecccc-cccccccc
Q 005954 395 VHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEAL-NLPFEFHPVVDRL-EDVRLWML 472 (667)
Q Consensus 395 VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~sl-gVpFEF~~V~~~l-E~l~~~~L 472 (667)
-+|+|+|.|.|. +...|+.+. |..+||+|+.+...++.+.+++...+..+ +-.++|. .... +.+..
T Consensus 110 ~~VLdIG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~--~~D~~~~l~~--- 177 (314)
T 2b2c_A 110 KRVLIIGGGDGG----ILREVLKHE---SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF--CGDGFEFLKN--- 177 (314)
T ss_dssp CEEEEESCTTSH----HHHHHTTCT---TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE--CSCHHHHHHH---
T ss_pred CEEEEEcCCcCH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE--EChHHHHHHh---
Confidence 479999999885 555566542 35799999999988877777654332222 1124442 2211 11110
Q ss_pred ccCCCcEEEEEeccchhhcccCCCCChH-HHHHHHH-HhcCCcEEEEeeecCCCCCcchhHHHHHHHHHHHHHHH
Q 005954 473 HVKEKESVAVNCIFQLHKTLYSGNGGVL-RDFLGLI-RSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFD 545 (667)
Q Consensus 473 ~i~~gEaLAVN~~~~LH~lL~des~~~l-~~fL~~I-RsL~PkVVVlvEqEadhNsp~F~~RF~EAL~yYsAlFD 545 (667)
.-..=++|++|... +.-... ... ..+++.+ +.|+|.-+++++.+.-... ...+.....+...+|.
T Consensus 178 ~~~~fD~Ii~d~~~---~~~~~~--~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~vF~ 244 (314)
T 2b2c_A 178 HKNEFDVIITDSSD---PVGPAE--SLFGQSYYELLRDALKEDGILSSQGESVWLH---LPLIAHLVAFNRKIFP 244 (314)
T ss_dssp CTTCEEEEEECCC------------------HHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHHHCS
T ss_pred cCCCceEEEEcCCC---CCCcch--hhhHHHHHHHHHhhcCCCeEEEEECCCcccC---HHHHHHHHHHHHHHCC
Confidence 00112566666532 111110 111 4566665 6799998888765322211 2334444444455554
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=20.64 E-value=6e+02 Score=24.79 Aligned_cols=95 Identities=8% Similarity=-0.014 Sum_probs=52.4
Q ss_pred EEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEecccccccccccccc
Q 005954 396 HIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLWMLHV 474 (667)
Q Consensus 396 HIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~~L~i 474 (667)
.|+|+|.+.|.--..|.+.. + ..++|||+.++..++.+.+++ +..|++ .+| +....+++ .. .
T Consensus 122 ~VLDlgcG~G~~s~~la~~~----~---~~~V~~vD~s~~av~~a~~n~----~~n~l~~~~~--~~~d~~~~-~~---~ 184 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPLAKYS----K---PKLVYAIEKNPTAYHYLCENI----KLNKLNNVIP--ILADNRDV-EL---K 184 (272)
T ss_dssp EEEETTCTTTTTHHHHHHHT----C---CSEEEEEECCHHHHHHHHHHH----HHTTCSSEEE--EESCGGGC-CC---T
T ss_pred EEEEecCcCCHHHHHHHHhC----C---CCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEE--EECChHHc-Cc---c
Confidence 68999999997544443322 1 358999999988887766554 445653 443 23333333 11 1
Q ss_pred CCCcEEEEEeccchhhcccCCCCChHHHHHHHHHhcCCcEEEEe
Q 005954 475 KEKESVAVNCIFQLHKTLYSGNGGVLRDFLGLIRSTNPTIVLMA 518 (667)
Q Consensus 475 ~~gEaLAVN~~~~LH~lL~des~~~l~~fL~~IRsL~PkVVVlv 518 (667)
..=+.|++|....+ ...+...++.|+|.-++++
T Consensus 185 ~~~D~Vi~d~p~~~-----------~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 185 DVADRVIMGYVHKT-----------HKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp TCEEEEEECCCSSG-----------GGGHHHHHHHEEEEEEEEE
T ss_pred CCceEEEECCcccH-----------HHHHHHHHHHcCCCCEEEE
Confidence 11245555543211 1123344678899755443
No 199
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=20.05 E-value=1.5e+02 Score=28.25 Aligned_cols=100 Identities=20% Similarity=0.170 Sum_probs=54.8
Q ss_pred eEEEEEccccCCCChHHHHHHHhcCCCCCCeEEEeeeCCChHHHHHHHHHHHHHHHHcCCc-eEEEEecccccccccccc
Q 005954 394 RVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGESKQELNETGDRLSGFAEALNLP-FEFHPVVDRLEDVRLWML 472 (667)
Q Consensus 394 ~VHIIDFgI~~G~QWPsLIQaLA~R~ggPP~LRITgI~~s~~~L~etG~RL~~fA~slgVp-FEF~~V~~~lE~l~~~~L 472 (667)
.-+|+|+|.|.|.-=..|.+. .+ ..++|||+.+...++.+.++. +..|++ ++|. ...++++... .
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~--~~d~~~~~~~-~ 136 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKIC---FP----HLHVTIVDSLNKRITFLEKLS----EALQLENTTFC--HDRAETFGQR-K 136 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHH----HHHTCSSEEEE--ESCHHHHTTC-T
T ss_pred CCEEEEecCCCCHHHHHHHHh---CC----CCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEEE--eccHHHhccc-c
Confidence 358999999998643333321 22 368999999988776665543 345663 4443 3334433210 0
Q ss_pred ccCCC-cEEEEEeccchhhcccCCCCChHHHHHHHH-HhcCCcEEEEee
Q 005954 473 HVKEK-ESVAVNCIFQLHKTLYSGNGGVLRDFLGLI-RSTNPTIVLMAE 519 (667)
Q Consensus 473 ~i~~g-EaLAVN~~~~LH~lL~des~~~l~~fL~~I-RsL~PkVVVlvE 519 (667)
..... +.|+.+. + ..+..+|+.+ +-|+|.-.++..
T Consensus 137 ~~~~~fD~V~~~~-------~-----~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 137 DVRESYDIVTARA-------V-----ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TTTTCEEEEEEEC-------C-----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCccEEEEec-------c-----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 00011 2233222 1 2356777777 678998665553
Done!