Query         005958
Match_columns 667
No_of_seqs    666 out of 3224
Neff          7.2 
Searched_HMMs 13730
Date          Mon Mar 25 12:08:08 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005958.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005958hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2j4za1 d.144.1.7 (A:126-388)  100.0   9E-55 6.5E-59  447.9  25.6  247   82-402     2-260 (263)
  2 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 6.2E-55 4.5E-59  451.0  20.5  249   85-403     4-266 (271)
  3 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 7.4E-54 5.4E-58  446.8  24.2  252   84-409     6-279 (288)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 1.9E-53 1.4E-57  444.6  25.6  246   86-403    20-276 (293)
  5 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 4.9E-53 3.6E-57  449.9  27.8  249   83-405     2-269 (337)
  6 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.4E-52   1E-56  451.1  28.7  256   84-406     2-274 (364)
  7 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 1.4E-52 9.9E-57  441.0  27.2  250   86-404     9-271 (307)
  8 d2jfla1 d.144.1.7 (A:21-308) S 100.0 4.7E-53 3.4E-57  440.6  23.0  249   86-403    12-275 (288)
  9 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 1.5E-53 1.1E-57  451.2  18.8  265   83-404     3-305 (322)
 10 d1koaa2 d.144.1.7 (A:5915-6264 100.0 2.7E-52   2E-56  446.5  28.1  257   84-408    24-291 (350)
 11 d1t4ha_ d.144.1.7 (A:) Protein 100.0 3.9E-52 2.8E-56  429.8  28.1  247   88-401    11-270 (270)
 12 d1jksa_ d.144.1.7 (A:) Death-a 100.0   2E-52 1.4E-56  436.5  25.9  252   86-406    10-280 (293)
 13 d2java1 d.144.1.7 (A:3-271) Se 100.0 5.5E-53   4E-57  435.9  21.4  249   85-400     3-269 (269)
 14 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 2.6E-52 1.9E-56  440.6  26.5  250   83-406     1-266 (316)
 15 d1koba_ d.144.1.7 (A:) Twitchi 100.0 3.5E-52 2.6E-56  445.9  27.1  252   85-404    28-290 (352)
 16 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.8E-51 1.3E-55  426.3  28.1  250   85-402     2-275 (277)
 17 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 9.4E-52 6.9E-56  432.1  25.1  267   90-407     2-290 (299)
 18 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 9.8E-52 7.1E-56  442.2  25.6  248   84-405    39-302 (350)
 19 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 4.9E-52 3.5E-56  437.2  22.6  246   87-403    16-273 (309)
 20 d1xjda_ d.144.1.7 (A:) Protein 100.0 3.1E-51 2.3E-55  433.1  26.3  248   85-405     1-263 (320)
 21 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 8.3E-51   6E-55  425.1  28.7  272   85-406     1-292 (298)
 22 d1tkia_ d.144.1.7 (A:) Titin,  100.0 1.9E-51 1.4E-55  435.0  22.7  251   85-403     4-264 (321)
 23 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 3.8E-51 2.8E-55  422.7  20.8  243   86-404     4-262 (273)
 24 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 2.9E-50 2.1E-54  426.0  25.8  268   85-405    34-327 (328)
 25 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 2.8E-50 2.1E-54  418.0  25.1  266   85-402     1-286 (286)
 26 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.1E-50   8E-55  431.5  21.4  260   84-404     9-279 (335)
 27 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 7.3E-50 5.3E-54  418.2  27.0  278   85-404     6-300 (305)
 28 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 3.9E-49 2.9E-53  409.3  28.1  258   85-404     1-290 (292)
 29 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 1.3E-49 9.2E-54  425.4  23.9  275   87-405    21-311 (350)
 30 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 2.8E-49   2E-53  421.7  24.6  273   85-405    17-309 (346)
 31 d1opja_ d.144.1.7 (A:) Abelson 100.0 4.7E-49 3.5E-53  410.0  25.0  247   80-396    11-268 (287)
 32 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 1.1E-48   8E-53  411.9  26.3  262   85-404     9-312 (318)
 33 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 2.1E-48 1.5E-52  415.1  27.1  271   86-404     8-302 (345)
 34 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0   2E-48 1.5E-52  412.1  23.9  272   81-397    32-320 (325)
 35 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 4.2E-48   3E-52  397.6  25.1  241   84-397     3-255 (263)
 36 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 1.6E-48 1.2E-52  412.5  22.6  259   82-405    20-300 (322)
 37 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 3.9E-48 2.8E-52  412.5  24.4  273   85-404    17-308 (348)
 38 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 2.1E-48 1.6E-52  402.8  21.0  247   81-397     3-266 (276)
 39 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 2.6E-48 1.9E-52  401.2  19.3  249   80-401     7-269 (272)
 40 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0   1E-47 7.6E-52  402.1  23.2  246   83-397    23-286 (299)
 41 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 1.7E-47 1.3E-51  397.8  21.7  248   83-401     5-272 (285)
 42 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 2.1E-47 1.6E-51  394.8  22.2  250   85-400     6-272 (277)
 43 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 1.4E-47 9.9E-52  397.0  20.5  241   88-400     8-269 (277)
 44 d1fmka3 d.144.1.7 (A:249-533)  100.0 4.5E-47 3.3E-51  394.7  23.8  259   79-409    10-281 (285)
 45 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 2.1E-47 1.5E-51  391.6  20.4  241   84-397     2-254 (258)
 46 d1ywna1 d.144.1.7 (A:818-1166) 100.0 6.8E-47   5E-51  395.1  24.5  268   81-397     8-290 (299)
 47 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 7.8E-47 5.6E-51  389.9  22.5  246   82-397     3-262 (273)
 48 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.4E-46   1E-50  402.5  23.4  270   85-404    16-318 (355)
 49 d1mqba_ d.144.1.7 (A:) epha2 r 100.0   8E-46 5.8E-50  384.5  26.0  248   82-396     3-265 (283)
 50 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.3E-46 9.8E-51  386.4  19.1  245   81-397     2-253 (262)
 51 d1xkka_ d.144.1.7 (A:) EGF rec 100.0   9E-46 6.5E-50  390.3  25.2  245   84-397     7-266 (317)
 52 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 6.5E-46 4.8E-50  388.4  22.7  272   81-396     8-294 (301)
 53 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0   4E-45 2.9E-49  384.3  26.8  270   79-396    16-300 (311)
 54 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0   3E-45 2.2E-49  383.1  24.7  265   81-396     8-289 (299)
 55 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 1.5E-45 1.1E-49  387.3  20.2  262   80-397     4-279 (309)
 56 d1u46a_ d.144.1.7 (A:) Activat 100.0 4.5E-45 3.3E-49  377.1  20.8  245   83-396     5-267 (273)
 57 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 1.3E-44 9.5E-49  379.9  19.9  265   80-402    14-299 (308)
 58 d1ckia_ d.144.1.7 (A:) Casein  100.0 6.7E-43 4.9E-47  364.5  24.7  251   86-400     7-278 (299)
 59 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 5.7E-43 4.1E-47  368.0  22.2  242   89-397    30-287 (311)
 60 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 3.8E-43 2.8E-47  375.0  20.5  280   84-404    11-335 (362)
 61 d1vjya_ d.144.1.7 (A:) Type I  100.0 3.7E-43 2.7E-47  368.0  20.0  258   86-397     3-291 (303)
 62 d1csna_ d.144.1.7 (A:) Casein  100.0 1.4E-41 1.1E-45  354.0  25.6  248   85-396     4-271 (293)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9   2E-23 1.4E-27  202.3  10.4  163   88-314     2-189 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.2   5E-06 3.7E-10   81.4  12.9   86   85-192    13-100 (263)
 65 d2pula1 d.144.1.6 (A:5-396) Me  97.6 0.00012 8.8E-09   76.5  11.5   78   91-188    31-117 (392)
 66 d1nd4a_ d.144.1.6 (A:) Aminogl  97.6 0.00015 1.1E-08   70.2  11.2   77   93-189    17-93  (255)
 67 d1nw1a_ d.144.1.8 (A:) Choline  96.6  0.0052 3.8E-07   63.4  12.2   85   85-189    42-128 (395)
 68 d1zyla1 d.144.1.6 (A:4-328) Rd  96.3  0.0048 3.5E-07   62.0   9.6   69  105-186    37-108 (325)
 69 d2ppqa1 d.144.1.6 (A:5-320) Ho  95.7   0.012 8.8E-07   58.3   9.0   56   83-149    15-70  (316)
 70 d1e7ua4 d.144.1.4 (A:726-1094)  28.9      33  0.0024   33.6   6.0   45  233-280   200-244 (369)
 71 d1ci0a_ b.45.1.1 (A:) Pyridoxi  25.9      20  0.0015   32.2   3.4   50  614-663    12-66  (205)

No 1  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-55  Score=447.90  Aligned_cols=247  Identities=20%  Similarity=0.265  Sum_probs=210.2

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCC
Q 005958           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHS  156 (667)
Q Consensus        82 ~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hp  156 (667)
                      +|.+++|++++.||+|+||    +||+|+++.     +++.||+|++.+..     ..+.+.+|+++|++++      ||
T Consensus         2 ~~~l~dy~i~~~iG~G~fg----~Vy~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------hp   66 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFG----NVYLAREKQ-----SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------HP   66 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CT
T ss_pred             CcchhHeEEEEEEecCCCc----EEEEEEECC-----CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC------CC
Confidence            4678999999999999999    999999998     89999999997532     2356789999999994      99


Q ss_pred             cceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHH
Q 005958          157 YSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  236 (667)
Q Consensus       157 nIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i  236 (667)
                      |||++++++.     +.+.+||||| ||++|+|.+++.+.+         .++|.                    .++.|
T Consensus        67 nIv~~~~~~~-----~~~~~~ivmE-y~~~g~L~~~l~~~~---------~l~e~--------------------~~~~i  111 (263)
T d2j4za1          67 NILRLYGYFH-----DATRVYLILE-YAPLGTVYRELQKLS---------KFDEQ--------------------RTATY  111 (263)
T ss_dssp             TBCCEEEEEE-----CSSEEEEEEE-CCTTCBHHHHHHHHS---------SCCHH--------------------HHHHH
T ss_pred             CCCeEEEEEE-----ECCEEEEEEe-ecCCCcHHHHHhhcC---------CCCHH--------------------HHHHH
Confidence            9999999999     8889999999 999999999998764         56654                    56789


Q ss_pred             HHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC-------CCCCCcccccCCCCCCchhhHHH
Q 005958          237 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-------PNNSSPDSNMDRRQMMIAFDMRC  309 (667)
Q Consensus       237 ~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~-------~~Y~APE~l~~~~~ys~ksDIWS  309 (667)
                      +.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+......       +.|+|||++. +..|+.++||||
T Consensus       112 ~~qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~-~~~~~~~~DiwS  189 (263)
T d2j4za1         112 ITELANALSYCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVDLWS  189 (263)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHT-TCCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHCCeeeeeeccccceecC-CCCEeecccceeeecCCCcccccCCCCcccCHHHHc-CCCCCchhhhhh
Confidence            999999999999999999999999999998 8999999999998765443       7899999655 456899999999


Q ss_pred             HHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCC
Q 005958          310 VGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  389 (667)
Q Consensus       310 LGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRp  389 (667)
                      |||++|||++|++||.            +.....+...   +....       ...+..+++++++||.+||++||++||
T Consensus       190 lGvilyell~G~~Pf~------------~~~~~~~~~~---i~~~~-------~~~p~~~s~~~~~li~~~L~~dp~~R~  247 (263)
T d2j4za1         190 LGVLCYEFLVGKPPFE------------ANTYQETYKR---ISRVE-------FTFPDFVTEGARDLISRLLKHNPSQRP  247 (263)
T ss_dssp             HHHHHHHHHHSSCTTC------------CSSHHHHHHH---HHTTC-------CCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhHHHHHHhcCCCCCC------------CCCHHHHHHH---HHcCC-------CCCCccCCHHHHHHHHHHccCCHhHCc
Confidence            9999999999999995            3333332222   22221       223456889999999999999999999


Q ss_pred             CHHHHHcCCCCCC
Q 005958          390 SCLDALRHPFLCG  402 (667)
Q Consensus       390 Sa~elL~HPwf~~  402 (667)
                      |++|+|+||||+.
T Consensus       248 t~~eil~hp~~~~  260 (263)
T d2j4za1         248 MLREVLEHPWITA  260 (263)
T ss_dssp             CHHHHHTCHHHHH
T ss_pred             CHHHHHcCcCcCC
Confidence            9999999999964


No 2  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-55  Score=451.03  Aligned_cols=249  Identities=19%  Similarity=0.219  Sum_probs=204.8

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCCCcceEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIv~l  161 (667)
                      .++|++++.||+|+||    +||+|+++.     +++.||||++....   ..+.+.+|+++|++++      |||||++
T Consensus         4 ~~dy~~~~~lG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~~   68 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYG----EVQLAVNRV-----TEEAVAVKIVDMKRAVDCPENIKKEICINKMLN------HENVVKF   68 (271)
T ss_dssp             TTEEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECC-------CHHHHHHHHHTCC------CTTBCCE
T ss_pred             CcceEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC------CCCEeeE
Confidence            5789999999999999    999999998     89999999997532   2345789999999994      9999999


Q ss_pred             EEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHH
Q 005958          162 HGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  241 (667)
Q Consensus       162 ~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl  241 (667)
                      ++++.     +.+.+||||| ||++|+|.+++...+         .++|.                    .++.++.||+
T Consensus        69 ~~~~~-----~~~~~~ivmE-y~~gg~L~~~l~~~~---------~l~e~--------------------~~~~i~~qi~  113 (271)
T d1nvra_          69 YGHRR-----EGNIQYLFLE-YCSGGELFDRIEPDI---------GMPEP--------------------DAQRFFHQLM  113 (271)
T ss_dssp             EEEEE-----ETTEEEEEEE-CCTTEEGGGGSBTTT---------BCCHH--------------------HHHHHHHHHH
T ss_pred             eeeec-----cCceeEEEEe-ccCCCcHHHHHhcCC---------CCCHH--------------------HHHHHHHHHH
Confidence            99999     7789999999 999999999987644         56654                    5678999999


Q ss_pred             HHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC-----------CCCCCCCcccccCCCCCCchhhHHHH
Q 005958          242 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMDRRQMMIAFDMRCV  310 (667)
Q Consensus       242 ~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-----------~~~~Y~APE~l~~~~~ys~ksDIWSL  310 (667)
                      .||+|||++||+||||||+|||++. ++.+||+|||+|+....           +++.|||||++.+...++.++||||+
T Consensus       114 ~al~ylH~~~IiHrDiKp~NILl~~-~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSl  192 (271)
T d1nvra_         114 AGVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC  192 (271)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHH
T ss_pred             HHHHHHHHcCCccCcccHHHEEECC-CCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHh
Confidence            9999999999999999999999998 89999999999986532           23789999977766666789999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCC
Q 005958          311 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  390 (667)
Q Consensus       311 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpS  390 (667)
                      ||++|||++|++||....           .........   ....     ........+++++++||.+||+.||++|||
T Consensus       193 Gvilyeml~G~~pf~~~~-----------~~~~~~~~~---~~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  253 (271)
T d1nvra_         193 GIVLTAMLAGELPWDQPS-----------DSCQEYSDW---KEKK-----TYLNPWKKIDSAPLALLHKILVENPSARIT  253 (271)
T ss_dssp             HHHHHHHHHSSCSCSSSS-----------TTSHHHHHH---HTTC-----TTSTTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHHHhCCCCCCCCC-----------hHHHHHHHH---hcCC-----CCCCccccCCHHHHHHHHHHcCCChhHCcC
Confidence            999999999999995211           111111111   1110     112234567899999999999999999999


Q ss_pred             HHHHHcCCCCCCC
Q 005958          391 CLDALRHPFLCGP  403 (667)
Q Consensus       391 a~elL~HPwf~~~  403 (667)
                      ++|+|+||||+..
T Consensus       254 ~~eil~hpwf~~~  266 (271)
T d1nvra_         254 IPDIKKDRWYNKP  266 (271)
T ss_dssp             HHHHTTCTTTTCC
T ss_pred             HHHHhcCHhhCcC
Confidence            9999999999863


No 3  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-54  Score=446.75  Aligned_cols=252  Identities=17%  Similarity=0.270  Sum_probs=212.0

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      ..++|++++.||+|+||    +||+|+++.     +++.||||++.+..     ..+.+.+|+++|++++      ||||
T Consensus         6 ~p~dy~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnI   70 (288)
T d1uu3a_           6 RPEDFKFGKILGEGSFS----TVVLARELA-----TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD------HPFF   70 (288)
T ss_dssp             CGGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC------STTB
T ss_pred             CCCCCEEEEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC------CCCe
Confidence            34789999999999999    999999998     89999999997532     2356789999999994      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     +.+.+||||| ||++|+|.+++...+         .++|.                    .++.++.
T Consensus        71 v~l~~~~~-----~~~~~~ivmE-y~~gg~L~~~~~~~~---------~l~e~--------------------~~~~~~~  115 (288)
T d1uu3a_          71 VKLYFTFQ-----DDEKLYFGLS-YAKNGELLKYIRKIG---------SFDET--------------------CTRFYTA  115 (288)
T ss_dssp             CCEEEEEE-----CSSEEEEEEC-CCTTEEHHHHHHHHS---------SCCHH--------------------HHHHHHH
T ss_pred             eEEEEEEE-----ECCEEEEEEE-ccCCCCHHHhhhccC---------CCCHH--------------------HHHHHHH
Confidence            99999999     7899999999 999999999998765         56664                    5788999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC-----------CCCCCCCcccccCCCCCCchhhH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMDRRQMMIAFDM  307 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-----------~~~~Y~APE~l~~~~~ys~ksDI  307 (667)
                      ||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+..           +++.|+|||++. +..|+.++||
T Consensus       116 qi~~al~ylH~~~iiHrDiKp~NIll~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~~~~~Di  193 (288)
T d1uu3a_         116 EIVSALEYLHGKGIIHRDLKPENILLNE-DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSACKSSDL  193 (288)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEECC----------CCCCGGGCCHHHHH-TCCCCHHHHH
T ss_pred             HHHHHHHhhccccEEcCcCCccccccCC-CceEEecccccceecccCCcccccccccCCccccCceeec-cCCCCcccce
Confidence            9999999999999999999999999998 89999999999986532           347899999654 4569999999


Q ss_pred             HHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          308 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       308 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      |||||++|||++|++||.            +.+...+.   ..+....       +..+..+++++++||.+||++||++
T Consensus       194 wSlGvilyell~g~~Pf~------------~~~~~~~~---~~i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~~  251 (288)
T d1uu3a_         194 WALGCIIYQLVAGLPPFR------------AGNEYLIF---QKIIKLE-------YDFPEKFFPKARDLVEKLLVLDATK  251 (288)
T ss_dssp             HHHHHHHHHHHHSSCSSC------------CSSHHHHH---HHHHTTC-------CCCCTTCCHHHHHHHHTTSCSSGGG
T ss_pred             ehhhHHHHHHhhCCCCCC------------CcCHHHHH---HHHHcCC-------CCCCccCCHHHHHHHHHHccCCHhH
Confidence            999999999999999995            22332222   2222221       2234578999999999999999999


Q ss_pred             CCCHHH------HHcCCCCCCCCCCCCC
Q 005958          388 RISCLD------ALRHPFLCGPRWRVDP  409 (667)
Q Consensus       388 RpSa~e------lL~HPwf~~~~~~~~~  409 (667)
                      |||++|      +++||||++++|....
T Consensus       252 R~t~~e~~~~~~i~~Hpff~~i~w~~l~  279 (288)
T d1uu3a_         252 RLGCEEMEGYGPLKAHPFFESVTWENLH  279 (288)
T ss_dssp             STTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred             CcCHHHHcCCHHHHcCCccCCCCHHHhh
Confidence            999987      6899999999986543


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-53  Score=444.63  Aligned_cols=246  Identities=20%  Similarity=0.225  Sum_probs=205.6

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh--hHHHHHHHHHHHHHHhhccCCCCCcceEEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--AQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~--~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~  163 (667)
                      ++|++++.||+|+||    +||+|+++.     +|+.||||++....  ..+.+.+|+++|++++      |||||++++
T Consensus        20 ~~Y~~~~~iG~G~fg----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~   84 (293)
T d1yhwa1          20 KKYTRFEKIGQGASG----TVYTAMDVA-----TGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLD   84 (293)
T ss_dssp             TTBCSCEECCCSSSC----EEEEEEBTT-----TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC------CTTBCCEEE
T ss_pred             cccEEEEEEecCcCc----EEEEEEECC-----CCCEEEEEEEecccChHHHHHHHHHHHHHhCC------CCCEeeEeE
Confidence            579999999999999    999999988     89999999997532  3456799999999994      999999999


Q ss_pred             EEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHH
Q 005958          164 YVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  243 (667)
Q Consensus       164 ~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~a  243 (667)
                      ++.     +.+.+||||| ||++|+|.+++.+.          .++|                    ..++.|++||+.|
T Consensus        85 ~~~-----~~~~~~ivmE-y~~gg~L~~~~~~~----------~l~~--------------------~~~~~i~~qi~~a  128 (293)
T d1yhwa1          85 SYL-----VGDELWVVME-YLAGGSLTDVVTET----------CMDE--------------------GQIAAVCRECLQA  128 (293)
T ss_dssp             EEE-----ETTEEEEEEE-CCTTCBHHHHHHHS----------CCCH--------------------HHHHHHHHHHHHH
T ss_pred             EEE-----ECCEEEEEEE-ecCCCcHHHHhhcc----------CCCH--------------------HHHHHHHHHHHHH
Confidence            999     7789999999 99999999988763          4565                    4578899999999


Q ss_pred             HHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC---------CCCCCCcccccCCCCCCchhhHHHHHHHH
Q 005958          244 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       244 L~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~---------~~~Y~APE~l~~~~~ys~ksDIWSLGviL  314 (667)
                      |+|||++||+||||||+|||++. ++++||+|||+|+.+...         ++.|+|||++. +..|+.++|||||||++
T Consensus       129 L~yLH~~~iiHrDiKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~DiwSlGvil  206 (293)
T d1yhwa1         129 LEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMA  206 (293)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHS-SSCBCTHHHHHHHHHHH
T ss_pred             HHHHHHCCCcccCCcHHHeEECC-CCcEeeccchhheeeccccccccccccCCCccChhhhc-CCCCCchhceehHhHHH
Confidence            99999999999999999999998 899999999999876432         37799999654 46699999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 005958          315 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  394 (667)
Q Consensus       315 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~el  394 (667)
                      |||++|++||.+            ........   .+.....+    .++.+..+++++++||.+||++||++|||++|+
T Consensus       207 yemltG~~Pf~~------------~~~~~~~~---~~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ei  267 (293)
T d1yhwa1         207 IEMIEGEPPYLN------------ENPLRALY---LIATNGTP----ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (293)
T ss_dssp             HHHHHSSCTTTT------------SCHHHHHH---HHHHHCSC----CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHhhCCCCCCC------------CCHHHHHH---HHHhCCCC----CCCCcccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            999999999952            22211111   11111111    233456789999999999999999999999999


Q ss_pred             HcCCCCCCC
Q 005958          395 LRHPFLCGP  403 (667)
Q Consensus       395 L~HPwf~~~  403 (667)
                      |+||||+..
T Consensus       268 l~Hp~~~~~  276 (293)
T d1yhwa1         268 LQHQFLKIA  276 (293)
T ss_dssp             TTCGGGGGC
T ss_pred             hcCHhhCCC
Confidence            999999753


No 5  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.9e-53  Score=449.95  Aligned_cols=249  Identities=21%  Similarity=0.277  Sum_probs=212.7

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      +.+++|++++.||+|+||    +||+|+++.     +++.||||++++..     ..+.+.+|+.+|+++      +|||
T Consensus         2 i~l~dy~~~~~lG~G~fg----~V~~~~~~~-----~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l------~hp~   66 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFG----KVILVREKA-----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT------RHPF   66 (337)
T ss_dssp             CCGGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC------CCTT
T ss_pred             CchHhcEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC------CCCC
Confidence            567899999999999999    999999998     89999999998632     235678999999999      4999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      |++++++++     +.+.+|+||| ||++|+|.+++.+.+         .++|+                    .++.|+
T Consensus        67 Iv~l~~~~~-----~~~~~~iv~e-y~~gg~L~~~~~~~~---------~~~e~--------------------~~~~~~  111 (337)
T d1o6la_          67 LTALKYAFQ-----THDRLCFVME-YANGGELFFHLSRER---------VFTEE--------------------RARFYG  111 (337)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEE-CCTTCBHHHHHHHHS---------CCCHH--------------------HHHHHH
T ss_pred             EEEEEeeec-----ccccccccee-ccCCCchhhhhhccc---------CCcHH--------------------HHHHHH
Confidence            999999999     8899999999 999999999998865         56664                    468899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC---------CCCCCCcccccCCCCCCchhhHH
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMR  308 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~---------~~~Y~APE~l~~~~~ys~ksDIW  308 (667)
                      .||+.||+|||++||+||||||+|||++. +|.+||+|||+|+.....         ++.|+|||++. +..|+.++|||
T Consensus       112 ~qil~al~ylH~~~iiHRDlKP~NILl~~-~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~-~~~y~~~~Diw  189 (337)
T d1o6la_         112 AEIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWW  189 (337)
T ss_dssp             HHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGS-SSCBCTTHHHH
T ss_pred             HHHhhhhhhhhhcCccccccCHHHeEecC-CCCEEEeecccccccccCCcccccceeCHHHhhhhhcc-CCCCChhhccc
Confidence            99999999999999999999999999998 899999999999865432         27899999554 55689999999


Q ss_pred             HHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCC
Q 005958          309 CVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  388 (667)
Q Consensus       309 SLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kR  388 (667)
                      ||||++|||++|++||.            +.+...+.+.   +....       ...+..+|+++++||.+||++||++|
T Consensus       190 SlGvilyeml~G~~pf~------------~~~~~~~~~~---i~~~~-------~~~p~~~s~~~~dli~~~L~~dP~~R  247 (337)
T d1o6la_         190 GLGVVMYEMMCGRLPFY------------NQDHERLFEL---ILMEE-------IRFPRTLSPEAKSLLAGLLKKDPKQR  247 (337)
T ss_dssp             HHHHHHHHHHHSSCSSC------------CSSHHHHHHH---HHHCC-------CCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             chhhHHHHHHHCCCCCC------------CcCHHHHHHH---HhcCC-------CCCCccCCHHHHHHHHhhccCCchhh
Confidence            99999999999999985            3333333332   22221       23446789999999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCCCC
Q 005958          389 IS-----CLDALRHPFLCGPRW  405 (667)
Q Consensus       389 pS-----a~elL~HPwf~~~~~  405 (667)
                      ++     ++|+++||||++..|
T Consensus       248 ~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         248 LGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             TTCSTTTHHHHHTSGGGTTCCH
T ss_pred             cccccccHHHHHcCcccccCCH
Confidence            94     999999999999875


No 6  
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.4e-52  Score=451.09  Aligned_cols=256  Identities=16%  Similarity=0.184  Sum_probs=211.2

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      .+++|++++.||+|+||    +||+|+++.     +|+.||||++.+..     ......+|..+++.++   .++||||
T Consensus         2 slddy~i~~~lG~G~fg----~Vy~~~~~~-----t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~---~~~hpnI   69 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFG----EVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS---TGDCPFI   69 (364)
T ss_dssp             CSTTEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHS---SSCCTTB
T ss_pred             CHHhCeeeeEEecCCCe----EEEEEEECC-----CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHh---cCCCCcE
Confidence            57899999999999999    999999998     89999999997532     2233456665555553   2369999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     +.+.+||||| ||++|+|.++|.+..         .++|                    ..++.|+.
T Consensus        70 v~l~~~~~-----~~~~~~ivmE-~~~gg~L~~~l~~~~---------~~~e--------------------~~~~~~~~  114 (364)
T d1omwa3          70 VCMSYAFH-----TPDKLSFILD-LMNGGDLHYHLSQHG---------VFSE--------------------ADMRFYAA  114 (364)
T ss_dssp             CCEEEEEE-----CSSEEEEEEC-CCCSCBHHHHHHHHC---------SCCH--------------------HHHHHHHH
T ss_pred             EEEEEEEE-----ECCEEEEEEE-ecCCCcHHHHHHhcc---------cccH--------------------HHHHHHHH
Confidence            99999999     7889999999 999999999998764         4555                    45788999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-------CCCCCCcccccCCCCCCchhhHHHHH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------GPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-------~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      ||+.||.|||++||+||||||+|||++. ++.+||+|||+|+.+...       ++.|+|||++.....|+.++||||||
T Consensus       115 qi~~aL~ylH~~~iiHrDlKP~NILl~~-~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlG  193 (364)
T d1omwa3         115 EIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG  193 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEECS-SSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHCCccceeeccceeEEcC-CCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHH
Confidence            9999999999999999999999999998 899999999999876543       37899999877777899999999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCC-
Q 005958          312 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS-  390 (667)
Q Consensus       312 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpS-  390 (667)
                      |++|||++|++||..            ................       ....+..+++++++||.+||++||++||| 
T Consensus       194 vilyemltG~~Pf~~------------~~~~~~~~~~~~~~~~-------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         194 CMLFKLLRGHSPFRQ------------HKTKDKHEIDRMTLTM-------AVELPDSFSPELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             HHHHHHHHSSCSSCS------------SCSSCHHHHHHHSSSC-------CCCCCSSSCHHHHHHHHHHTCSSTTTSTTT
T ss_pred             HHHHHHHhCCCCCCC------------CCHHHHHHHHHhcccC-------CCCCCCCCCHHHHHHHHHHcccCHHHhCCC
Confidence            999999999999952            1222222222222221       12344578999999999999999999999 


Q ss_pred             ----HHHHHcCCCCCCCCCC
Q 005958          391 ----CLDALRHPFLCGPRWR  406 (667)
Q Consensus       391 ----a~elL~HPwf~~~~~~  406 (667)
                          |+|+++||||++++|.
T Consensus       255 ~~~~a~eil~Hp~f~~i~~~  274 (364)
T d1omwa3         255 LGRGAQEVKESPFFRSLDWQ  274 (364)
T ss_dssp             SSSTHHHHHTSGGGTTCCHH
T ss_pred             cccCHHHHHcCccccCCCHH
Confidence                7999999999998763


No 7  
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.4e-52  Score=441.03  Aligned_cols=250  Identities=19%  Similarity=0.224  Sum_probs=198.5

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      +.|++.+.||+|+||    +||+|+++.     +++.||||++.+..   ....+.+|+.+|+++      +|||||+++
T Consensus         9 d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~   73 (307)
T d1a06a_           9 DIYDFRDVLGTGAFS----EVILAEDKR-----TQKLVAIKCIAKKALEGKEGSMENEIAVLHKI------KHPNIVALD   73 (307)
T ss_dssp             GTEEEEEESBSGGGG----GEEEEEETT-----TCCEEEEEEEEC----------CHHHHHHHTC------CCTTBCCEE
T ss_pred             cceEEEEEEeeccCe----EEEEEEECC-----CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC------CCCCCCcEE
Confidence            679999999999999    999999998     89999999997632   234567899999999      499999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++.     +.+.+||||| ||+||+|.++|.+.+         .++|.                    .++.|+.||+.
T Consensus        74 ~~~~-----~~~~~~lvmE-~~~gg~L~~~l~~~~---------~l~e~--------------------~~~~~~~qi~~  118 (307)
T d1a06a_          74 DIYE-----SGGHLYLIMQ-LVSGGELFDRIVEKG---------FYTER--------------------DASRLIFQVLD  118 (307)
T ss_dssp             EEEE-----CSSEEEEEEC-CCCSCBHHHHHHTCS---------CCCHH--------------------HHHHHHHHHHH
T ss_pred             EEEE-----ECCEEEEEEe-ccCCCcHHHhhhccc---------CCCHH--------------------HHHHHHHHHHH
Confidence            9999     8899999999 999999999998754         56654                    56889999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcC--CCCeEEEeeecccccccCC--------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISP--VDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~--~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      ||+|||++||+||||||+|||+..  .++.+||+|||+|+.....        ++.|+|||++. +..|+.++|||||||
T Consensus       119 al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~-~~~~~~~~DiwSlGv  197 (307)
T d1a06a_         119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA-QKPYSKAVDCWSIGV  197 (307)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHT-TCCCCTHHHHHHHHH
T ss_pred             HHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHc-CCCCCcHHHhhhhhH
Confidence            999999999999999999999963  3689999999999865433        37899999654 556999999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHH
Q 005958          313 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  392 (667)
Q Consensus       313 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~  392 (667)
                      ++|||++|++||.            +.....+..   .+......   ...+..+.+++++++||.+||++||++|||++
T Consensus       198 ilyell~g~~Pf~------------~~~~~~~~~---~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  259 (307)
T d1a06a_         198 IAYILLCGYPPFY------------DENDAKLFE---QILKAEYE---FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE  259 (307)
T ss_dssp             HHHHHHHSSCSCC------------CSSHHHHHH---HHHTTCCC---CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHHHHHhCCCCCC------------CCCHHHHHH---HHhccCCC---CCCccccCCCHHHHHHHHHHccCCHhHCcCHH
Confidence            9999999999995            222222222   22222111   11234567899999999999999999999999


Q ss_pred             HHHcCCCCCCCC
Q 005958          393 DALRHPFLCGPR  404 (667)
Q Consensus       393 elL~HPwf~~~~  404 (667)
                      |+|+||||++..
T Consensus       260 eil~hp~~~~~~  271 (307)
T d1a06a_         260 QALQHPWIAGDT  271 (307)
T ss_dssp             HHHHSTTTTSSC
T ss_pred             HHhcCHhhCCCC
Confidence            999999998754


No 8  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.7e-53  Score=440.64  Aligned_cols=249  Identities=17%  Similarity=0.204  Sum_probs=207.1

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch--hhHHHHHHHHHHHHHHhhccCCCCCcceEEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV--QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~--~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~  163 (667)
                      +.|++++.||+|+||    +||+|+++.     +++.||||++...  ...+.+.+|+++|++++      |||||++++
T Consensus        12 d~Y~i~~~iG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~   76 (288)
T d2jfla1          12 DFWEIIGELGDGAFG----KVYKAQNKE-----TSVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLD   76 (288)
T ss_dssp             GTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC------CTTBCCEEE
T ss_pred             cCeEEeEEEeeCCCc----EEEEEEECC-----CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC------CCCCCeEEE
Confidence            579999999999999    999999998     8999999999753  33356789999999994      999999999


Q ss_pred             EEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHH
Q 005958          164 YVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  243 (667)
Q Consensus       164 ~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~a  243 (667)
                      ++.     +.+.+||||| ||++|+|.+++.+.+        ..++|                    ..++.++.||+.|
T Consensus        77 ~~~-----~~~~~~lvmE-y~~~g~L~~~~~~~~--------~~l~e--------------------~~~~~i~~qi~~g  122 (288)
T d2jfla1          77 AFY-----YENNLWILIE-FCAGGAVDAVMLELE--------RPLTE--------------------SQIQVVCKQTLDA  122 (288)
T ss_dssp             EEE-----ETTEEEEEEE-CCTTEEHHHHHHHHT--------SCCCH--------------------HHHHHHHHHHHHH
T ss_pred             EEe-----eCCeEEEEEe-cCCCCcHHHHHHhcC--------CCCCH--------------------HHHHHHHHHHHHH
Confidence            999     7789999999 999999999987643        14665                    4568899999999


Q ss_pred             HHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeeccccccc---------CCCCCCCCccccc----CCCCCCchhhHHHH
Q 005958          244 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFY---------EDGPNNSSPDSNM----DRRQMMIAFDMRCV  310 (667)
Q Consensus       244 L~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~---------~~~~~Y~APE~l~----~~~~ys~ksDIWSL  310 (667)
                      |.|||++||+||||||+|||++. ++.+||+|||+|+...         .+++.|+|||++.    ....|+.++|||||
T Consensus       123 L~ylH~~~ivHrDiKp~NIll~~-~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSl  201 (288)
T d2jfla1         123 LNYLHDNKIIHRDLKAGNILFTL-DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL  201 (288)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHH
T ss_pred             HHHHHHCCEEEeecChhheeECC-CCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHH
Confidence            99999999999999999999998 8999999999997542         2458899999764    34568999999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCC
Q 005958          311 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  390 (667)
Q Consensus       311 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpS  390 (667)
                      ||++|||++|++||.+.            .+.+...   .+.....+    .+.....+++++++||.+||++||++|||
T Consensus       202 Gvilyemltg~~Pf~~~------------~~~~~~~---~i~~~~~~----~~~~~~~~s~~~~~li~~~L~~dp~~R~t  262 (288)
T d2jfla1         202 GITLIEMAEIEPPHHEL------------NPMRVLL---KIAKSEPP----TLAQPSRWSSNFKDFLKKCLEKNVDARWT  262 (288)
T ss_dssp             HHHHHHHHHSSCTTTTS------------CGGGHHH---HHHHSCCC----CCSSGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHHhhCCCCCCCC------------CHHHHHH---HHHcCCCC----CCCccccCCHHHHHHHHHHccCChhHCcC
Confidence            99999999999999632            2222211   22222111    23344578999999999999999999999


Q ss_pred             HHHHHcCCCCCCC
Q 005958          391 CLDALRHPFLCGP  403 (667)
Q Consensus       391 a~elL~HPwf~~~  403 (667)
                      ++|+|+||||+..
T Consensus       263 ~~ell~hp~~~~~  275 (288)
T d2jfla1         263 TSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHTTSGGGCCC
T ss_pred             HHHHhcCcccCCC
Confidence            9999999999753


No 9  
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-53  Score=451.18  Aligned_cols=265  Identities=16%  Similarity=0.208  Sum_probs=207.9

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcce
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnIv  159 (667)
                      +..++|++++.||+|+||    +||+|+++.     +|+.||+|+++..   ...+.+.+|+.+|+++      +|||||
T Consensus         3 l~~d~y~~~~~iG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l------~HpnIv   67 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGG----VVFKVSHKP-----SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIV   67 (322)
T ss_dssp             CCGGGEEEEEEEECCSSC----CEEEEEETT-----TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC------CCTTBC
T ss_pred             CCccCCEEEEEEecCCCe----EEEEEEECC-----CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC------CCCCCC
Confidence            445889999999999999    999999998     8999999999753   3345678999999999      499999


Q ss_pred             EEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          160 QVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       160 ~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      +++++|.     +.+.+||||| ||++|+|.+++.+.+         .++|                    ..++.++.|
T Consensus        68 ~l~~~~~-----~~~~~~iVmE-y~~gg~L~~~l~~~~---------~l~~--------------------~~~~~~~~q  112 (322)
T d1s9ja_          68 GFYGAFY-----SDGEISICME-HMDGGSLDQVLKKAG---------RIPE--------------------QILGKVSIA  112 (322)
T ss_dssp             CEEEEEE-----CSSEEEEEEE-CCTTEEHHHHHHHHS---------SCCH--------------------HHHHHHHHH
T ss_pred             cEEEEEE-----ECCEEEEEEE-cCCCCcHHHHHhhcC---------CCCH--------------------HHHHHHHHH
Confidence            9999999     7889999999 999999999998764         5565                    457889999


Q ss_pred             HHHHHHHHHH-CCCcccCCCCCcEEEcCCCCeEEEeeeccccccc-------CCCCCCCCcccccCCCCCCchhhHHHHH
Q 005958          240 LLIGVNYLHS-HGLAHTELRLENVHISPVDRHIKVGILGNAADFY-------EDGPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       240 Il~aL~yLHs-~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~-------~~~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      |+.||.|||+ +||+||||||+|||++. ++.+||+|||+|+.+.       .+++.|+|||++.+ ..|+.++||||+|
T Consensus       113 il~aL~yLH~~~~IiHRDiKP~NILl~~-~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlG  190 (322)
T d1s9ja_         113 VIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMG  190 (322)
T ss_dssp             HHHHHHHHHHHHCCCCSCCSGGGEEECT-TCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHC-SCCCTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEccccCHHHeeECC-CCCEEEeeCCCccccCCCccccccCCccccCchHHcC-CCCCcHHHHHHHH
Confidence            9999999997 59999999999999998 8999999999998653       23488999997665 5699999999999


Q ss_pred             HHHHHHHhCCCCChhhh----hhhhhhhccCCChh-----------------------HHHHHHHHHhccCCCCCCCCcc
Q 005958          312 FMMAKMVLRELMDPLIF----TKFKSFLTKGIDPS-----------------------CLREFLLQVLNRNSSSGNTGFQ  364 (667)
Q Consensus       312 viLyemltG~~PF~~~~----~~~~~~~~~g~~~~-----------------------~l~~~~~~~~~~~~~~~~~~~~  364 (667)
                      |++|||++|+.||....    +........|....                       ...+.........++.     .
T Consensus       191 vil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  265 (322)
T d1s9ja_         191 LSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK-----L  265 (322)
T ss_dssp             HHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCC-----C
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCcc-----C
Confidence            99999999999996321    11111111111110                       0111111111111110     0


Q ss_pred             cccCCCHHHHHHHHHhhhcCcCCCCCHHHHHcCCCCCCCC
Q 005958          365 ILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       365 ~~~~~s~e~~dLI~~~L~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                      .....|++++|||.+||++||++||||+|+|+||||++.+
T Consensus       266 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         266 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence            1124688999999999999999999999999999998755


No 10 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=2.7e-52  Score=446.45  Aligned_cols=257  Identities=16%  Similarity=0.192  Sum_probs=212.0

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch--hhHHHHHHHHHHHHHHhhccCCCCCcceEE
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV--QAQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~--~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l  161 (667)
                      .+++|++++.||+|+||    +||+|+++.     +|+.||||++...  ...+.+.+|+.+|++++      |||||++
T Consensus        24 il~~Y~i~~~lG~G~fg----~Vy~~~~~~-----~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~~   88 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFG----VVHRVTERA-----TGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------HPTLVNL   88 (350)
T ss_dssp             GGGTEEEEEEEEEETTE----EEEEEEETT-----TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC------CTTBCCE
T ss_pred             CccCeEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEcccchhhHHHHHHHHHHHHhCC------CCCCCcE
Confidence            35899999999999999    999999998     8999999999763  33456789999999995      9999999


Q ss_pred             EEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHH
Q 005958          162 HGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  241 (667)
Q Consensus       162 ~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl  241 (667)
                      ++++.     +.+.+||||| ||++|+|.+++.+..        ..++|                    ..++.|+.||+
T Consensus        89 ~~~~~-----~~~~~~ivmE-~~~gg~L~~~l~~~~--------~~l~e--------------------~~~~~i~~qi~  134 (350)
T d1koaa2          89 HDAFE-----DDNEMVMIYE-FMSGGELFEKVADEH--------NKMSE--------------------DEAVEYMRQVC  134 (350)
T ss_dssp             EEEEE-----ETTEEEEEEC-CCCSCBHHHHHTCTT--------SCBCH--------------------HHHHHHHHHHH
T ss_pred             EEEEE-----ECCEEEEEEE-cCCCCCHHHHHHhhc--------CCCCH--------------------HHHHHHHHHHH
Confidence            99999     7789999999 999999999996432        24665                    45788999999


Q ss_pred             HHHHHHHHCCCcccCCCCCcEEEcC-CCCeEEEeeecccccccCC--------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          242 IGVNYLHSHGLAHTELRLENVHISP-VDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       242 ~aL~yLHs~gIvHrDLKPeNILl~~-~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      .||+|||++|||||||||+|||++. .++.+||+|||+|+.+...        ++.|||||++. +..|+.++|||||||
T Consensus       135 ~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~-~~~~~~~~DiwSlGv  213 (350)
T d1koaa2         135 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE-GKPVGYYTDMWSVGV  213 (350)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHH-TCCBCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHc-CCCCChhHhhhhhhH
Confidence            9999999999999999999999974 2578999999999876543        38899999655 456899999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHH
Q 005958          313 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  392 (667)
Q Consensus       313 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~  392 (667)
                      ++|||++|++||.            +.+.......   +......   ........+++++++||.+||++||++|||++
T Consensus       214 ilyell~G~~Pf~------------~~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~  275 (350)
T d1koaa2         214 LSYILLSGLSPFG------------GENDDETLRN---VKSCDWN---MDDSAFSGISEDGKDFIRKLLLADPNTRMTIH  275 (350)
T ss_dssp             HHHHHHHSSCSSC------------CSSHHHHHHH---HHHTCCC---SCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHHHHHhCCCCCC------------CCCHHHHHHH---HHhCCCC---CCcccccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999995            3333322222   2222111   11234457899999999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCC
Q 005958          393 DALRHPFLCGPRWRVD  408 (667)
Q Consensus       393 elL~HPwf~~~~~~~~  408 (667)
                      |+|+||||++..++..
T Consensus       276 eil~hp~~~~~~~~~~  291 (350)
T d1koaa2         276 QALEHPWLTPGNAPGR  291 (350)
T ss_dssp             HHHHSTTTSCTTCCSC
T ss_pred             HHhcCcccCCCCCCCc
Confidence            9999999998775443


No 11 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-52  Score=429.77  Aligned_cols=247  Identities=19%  Similarity=0.251  Sum_probs=200.7

Q ss_pred             eEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceEEEE
Q 005958           88 FKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (667)
Q Consensus        88 y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~  163 (667)
                      |++.++||+|+||    +||+|+++.     +++.||+|++....    ..+.+.+|+++|++++      |||||++++
T Consensus        11 ~~~~~~iG~G~fg----~Vy~~~~~~-----~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~   75 (270)
T d1t4ha_          11 LKFDIEIGRGSFK----TVYKGLDTE-----TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ------HPNIVRFYD   75 (270)
T ss_dssp             EEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC------CTTBCCEEE
T ss_pred             EEeeeEEecCcCc----EEEEEEECC-----CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC------CCCeeeEEE
Confidence            4788899999999    999999998     89999999987532    2345789999999994      999999999


Q ss_pred             EEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHH
Q 005958          164 YVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  243 (667)
Q Consensus       164 ~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~a  243 (667)
                      ++.... .....+||||| ||++|+|.+++.+..         .+++                    ..++.|+.||+.|
T Consensus        76 ~~~~~~-~~~~~~~ivmE-~~~~g~L~~~l~~~~---------~~~~--------------------~~~~~~~~qi~~g  124 (270)
T d1t4ha_          76 SWESTV-KGKKCIVLVTE-LMTSGTLKTYLKRFK---------VMKI--------------------KVLRSWCRQILKG  124 (270)
T ss_dssp             EEEEES-SSCEEEEEEEE-CCCSCBHHHHHHHHS---------SCCH--------------------HHHHHHHHHHHHH
T ss_pred             EEeecc-ccCCEEEEEEe-CCCCCcHHHHHhccc---------cccH--------------------HHHHHHHHHHHHH
Confidence            997431 14567999999 999999999998754         4555                    4567899999999


Q ss_pred             HHHHHHCC--CcccCCCCCcEEEcCCCCeEEEeeecccccccC-------CCCCCCCcccccCCCCCCchhhHHHHHHHH
Q 005958          244 VNYLHSHG--LAHTELRLENVHISPVDRHIKVGILGNAADFYE-------DGPNNSSPDSNMDRRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       244 L~yLHs~g--IvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-------~~~~Y~APE~l~~~~~ys~ksDIWSLGviL  314 (667)
                      |+|||++|  |+||||||+|||++..++.+||+|||+|+....       +++.|+|||++.  ..|+.++|||||||++
T Consensus       125 l~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~--~~~~~~~DIwSlGvil  202 (270)
T d1t4ha_         125 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCM  202 (270)
T ss_dssp             HHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHH
T ss_pred             HHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhC--CCCCCcCchhhHHHHH
Confidence            99999999  999999999999975478999999999975443       237899999653  3599999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 005958          315 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  394 (667)
Q Consensus       315 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~el  394 (667)
                      |||++|++||.+.           .+...+..   .+.....     ........++++++||.+||++||++|||++|+
T Consensus       203 yel~~g~~Pf~~~-----------~~~~~~~~---~i~~~~~-----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~el  263 (270)
T d1t4ha_         203 LEMATSEYPYSEC-----------QNAAQIYR---RVTSGVK-----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL  263 (270)
T ss_dssp             HHHHHSSCTTTTC-----------SSHHHHHH---HHTTTCC-----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHCCCCCCCc-----------ccHHHHHH---HHHcCCC-----CcccCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            9999999999532           11222222   2221111     122345678999999999999999999999999


Q ss_pred             HcCCCCC
Q 005958          395 LRHPFLC  401 (667)
Q Consensus       395 L~HPwf~  401 (667)
                      |+||||+
T Consensus       264 l~Hp~fk  270 (270)
T d1t4ha_         264 LNHAFFQ  270 (270)
T ss_dssp             HTSGGGC
T ss_pred             hCCcccC
Confidence            9999996


No 12 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-52  Score=436.55  Aligned_cols=252  Identities=19%  Similarity=0.227  Sum_probs=206.3

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh--------hHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--------AQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~--------~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      ++|++++.||+|+||    +||+|+++.     +|+.||||++++..        ..+.+.+|+.+|++++      |||
T Consensus        10 d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~------Hpn   74 (293)
T d1jksa_          10 DYYDTGEELGSGQFA----VVKKCREKS-----TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ------HPN   74 (293)
T ss_dssp             GTEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC------CTT
T ss_pred             cCEEEeEEEecCCCe----EEEEEEECC-----CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC------CCC
Confidence            679999999999999    999999998     89999999997521        2356789999999994      999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      ||++++++.     +.+.+||||| ||++|+|.++|.+.+         .++|                    ..++.++
T Consensus        75 Iv~~~~~~~-----~~~~~~iv~E-~~~gg~L~~~i~~~~---------~l~~--------------------~~~~~~~  119 (293)
T d1jksa_          75 VITLHEVYE-----NKTDVILILE-LVAGGELFDFLAEKE---------SLTE--------------------EEATEFL  119 (293)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEE-CCCSCBHHHHHHHHS---------SCCH--------------------HHHHHHH
T ss_pred             CCcEEEEEE-----ECCEEEEEEE-cCCCccccchhcccc---------ccch--------------------hHHHHHH
Confidence            999999999     8899999999 999999999998764         5665                    4578899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCC---CeEEEeeecccccccCCC--------CCCCCcccccCCCCCCchhh
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVD---RHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~---~~vKL~DFGlA~~~~~~~--------~~Y~APE~l~~~~~ys~ksD  306 (667)
                      .||+.||+|||++||+||||||+|||++..+   ..+||+|||+|.......        +.|+|||++. ...|+.++|
T Consensus       120 ~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~-~~~~~~~~D  198 (293)
T d1jksa_         120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN-YEPLGLEAD  198 (293)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHT-TCCBCTHHH
T ss_pred             HHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHc-CCCCCCccc
Confidence            9999999999999999999999999998722   259999999998765432        6799999554 556999999


Q ss_pred             HHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcC
Q 005958          307 MRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  386 (667)
Q Consensus       307 IWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~  386 (667)
                      |||+||++|||++|++||.            +.+..+....   +......   ......+.+++++++||.+||+.||+
T Consensus       199 iwSlGvilyell~g~~Pf~------------~~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~  260 (293)
T d1jksa_         199 MWSIGVITYILLSGASPFL------------GDTKQETLAN---VSAVNYE---FEDEYFSNTSALAKDFIRRLLVKDPK  260 (293)
T ss_dssp             HHHHHHHHHHHHHSSCSSC------------CSSHHHHHHH---HHTTCCC---CCHHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred             chhhhHHHHHHHcCCCCCC------------CCCHHHHHHH---HHhcCCC---CCchhcCCCCHHHHHHHHHHccCChh
Confidence            9999999999999999995            3233222222   2221111   11233457889999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCC
Q 005958          387 KRISCLDALRHPFLCGPRWR  406 (667)
Q Consensus       387 kRpSa~elL~HPwf~~~~~~  406 (667)
                      +|||++|+|+||||++..|.
T Consensus       261 ~R~s~~eil~hp~~~~~~~~  280 (293)
T d1jksa_         261 KRMTIQDSLQHPWIKPKDTQ  280 (293)
T ss_dssp             GSCCHHHHHHSTTTCC----
T ss_pred             HCcCHHHHhcCcccCCCChh
Confidence            99999999999999987653


No 13 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-53  Score=435.88  Aligned_cols=249  Identities=17%  Similarity=0.211  Sum_probs=195.7

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      .++|++++.||+|+||    +||+|+++.     +|+.||||++....    ..+.+.+|+++|+++      +|||||+
T Consensus         3 ~edy~~~~~iG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~   67 (269)
T d2java1           3 AEDYEVLYTIGTGSYG----RCQKIRRKS-----DGKILVWKELDYGSMTEAEKQMLVSEVNLLREL------KHPNIVR   67 (269)
T ss_dssp             GGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC------CCTTBCC
T ss_pred             chhCEEeEEEecCCCe----EEEEEEECC-----CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC------CCCCEee
Confidence            4789999999999999    999999998     89999999997532    234568999999999      4999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++.+.   ..+.+||||| ||++|+|.+++.+...     ....++|                    ..++.++.||
T Consensus        68 ~~~~~~~~---~~~~~~ivmE-y~~~g~L~~~i~~~~~-----~~~~l~e--------------------~~~~~i~~qi  118 (269)
T d2java1          68 YYDRIIDR---TNTTLYIVME-YCEGGDLASVITKGTK-----ERQYLDE--------------------EFVLRVMTQL  118 (269)
T ss_dssp             EEEEEEC-------CEEEEEE-CCTTEEHHHHHHHHHH-----HTCCCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEEeC---CCCEEEEEEe-cCCCCcHHHHHHhccc-----cCCCCCH--------------------HHHHHHHHHH
Confidence            99999733   4667999999 9999999999975320     1124555                    4578899999


Q ss_pred             HHHHHHHHHCC-----CcccCCCCCcEEEcCCCCeEEEeeecccccccCC---------CCCCCCcccccCCCCCCchhh
Q 005958          241 LIGVNYLHSHG-----LAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       241 l~aL~yLHs~g-----IvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~---------~~~Y~APE~l~~~~~ys~ksD  306 (667)
                      +.||+|||++|     |+||||||+|||++. ++.+||+|||+|+.+...         ++.|+|||++ ....|+.++|
T Consensus       119 ~~al~ylH~~~~~~~~IiHrDiKp~NIll~~-~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l-~~~~~~~~~D  196 (269)
T d2java1         119 TLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYNEKSD  196 (269)
T ss_dssp             HHHHHHHHHHCC---------CCGGGEEECT-TSCEEECCHHHHHHC-----------CCCSCCCHHHH-TTCCCCHHHH
T ss_pred             HHHHHHHHHhcCCCCCEEeCcCchhhcCcCC-CCcEEEeeccceeecccCCCccccCCCCcccCCHHHH-cCCCCChHHH
Confidence            99999999976     999999999999998 899999999999865432         3789999955 5566999999


Q ss_pred             HHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcC
Q 005958          307 MRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  386 (667)
Q Consensus       307 IWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~  386 (667)
                      ||||||++|||++|++||.            +.+..++...+   .....+      ..+..+++++++||.+||+.||+
T Consensus       197 IwSlGvilyel~tg~~Pf~------------~~~~~~~~~~i---~~~~~~------~~~~~~s~~l~~li~~~L~~dp~  255 (269)
T d2java1         197 IWSLGCLLYELCALMPPFT------------AFSQKELAGKI---REGKFR------RIPYRYSDELNEIITRMLNLKDY  255 (269)
T ss_dssp             HHHHHHHHHHHHHSSCSCC------------CSSHHHHHHHH---HHTCCC------CCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHhhCHHHHHHhhCCCCCC------------CCCHHHHHHHH---HcCCCC------CCCcccCHHHHHHHHHHcCCChh
Confidence            9999999999999999995            33333332222   222111      23356889999999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 005958          387 KRISCLDALRHPFL  400 (667)
Q Consensus       387 kRpSa~elL~HPwf  400 (667)
                      +|||++|+|+|||+
T Consensus       256 ~Rps~~ell~hp~i  269 (269)
T d2java1         256 HRPSVEEILENPLI  269 (269)
T ss_dssp             GSCCHHHHHTSTTC
T ss_pred             HCcCHHHHHhCCcC
Confidence            99999999999996


No 14 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.6e-52  Score=440.62  Aligned_cols=250  Identities=17%  Similarity=0.255  Sum_probs=211.6

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      |.+++|++++.||+|+||    +||+|+++.     +|+.||||++++..     ..+.+.+|+.+|+.++      |||
T Consensus         1 ~sl~dy~i~~~lG~G~fg----~Vy~a~~~~-----~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------Hpn   65 (316)
T d1fota_           1 YSLQDFQILRTLGTGSFG----RVHLIRSRH-----NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT------HPF   65 (316)
T ss_dssp             CCGGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC------BTT
T ss_pred             CchhHeEEEEEEecCcCc----EEEEEEECC-----CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc------CcC
Confidence            457899999999999999    999999998     89999999997532     2356789999999994      999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      ||++++++.     +.+.+|+||| ||+||+|.+++....         .+++                    ..++.++
T Consensus        66 Iv~~~~~~~-----~~~~~~ivmE-~~~gg~l~~~~~~~~---------~~~~--------------------~~~~~~~  110 (316)
T d1fota_          66 IIRMWGTFQ-----DAQQIFMIMD-YIEGGELFSLLRKSQ---------RFPN--------------------PVAKFYA  110 (316)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEC-CCCSCBHHHHHHHTS---------SCCH--------------------HHHHHHH
T ss_pred             hhheeeeEe-----eCCeeeeEee-ecCCccccccccccc---------cccc--------------------cHHHHHH
Confidence            999999999     8899999999 999999999998765         4454                    4567899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------CCCCCCcccccCCCCCCchhhHHHHH
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      .||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....      ++.|+|||++ .+..|+.++||||||
T Consensus       111 ~qi~~al~~lH~~~iiHrDiKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l-~~~~y~~~~DiwSlG  188 (316)
T d1fota_         111 AEVCLALEYLHSKDIIYRDLKPENILLDK-NGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVV-STKPYNKSIDWWSFG  188 (316)
T ss_dssp             HHHHHHHHHHHTTTEECCCCCGGGEEECT-TSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHH-TTCCBCTTHHHHHHH
T ss_pred             HHHHHhhhhhccCcEEccccCchheeEcC-CCCEEEecCccceEeccccccccCcccccCHHHH-cCCCCCchhhccccc
Confidence            99999999999999999999999999998 899999999999876433      3789999955 455699999999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCC--
Q 005958          312 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI--  389 (667)
Q Consensus       312 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRp--  389 (667)
                      |++|||++|++||.            +.+...+.   ..+....       ...++.+++++++||.+||++||.+|+  
T Consensus       189 vilyemltG~~Pf~------------~~~~~~~~---~~i~~~~-------~~~p~~~s~~~~~li~~~L~~dp~~R~~~  246 (316)
T d1fota_         189 ILIYEMLAGYTPFY------------DSNTMKTY---EKILNAE-------LRFPPFFNEDVKDLLSRLITRDLSQRLGN  246 (316)
T ss_dssp             HHHHHHHHSSCTTC------------CSSHHHHH---HHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred             hhHHHHHhCCCCCC------------CcCHHHHH---HHHHcCC-------CCCCCCCCHHHHHHHHHHhhhCHHhcccc
Confidence            99999999999995            22332222   2222221       223456889999999999999999996  


Q ss_pred             ---CHHHHHcCCCCCCCCCC
Q 005958          390 ---SCLDALRHPFLCGPRWR  406 (667)
Q Consensus       390 ---Sa~elL~HPwf~~~~~~  406 (667)
                         |++++|+||||+++.|.
T Consensus       247 ~r~t~~~il~Hp~f~~i~~~  266 (316)
T d1fota_         247 LQNGTEDVKNHPWFKEVVWE  266 (316)
T ss_dssp             STTTTHHHHTSGGGSSCCHH
T ss_pred             chhhHHHHHcCcccccCCHH
Confidence               99999999999998863


No 15 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=3.5e-52  Score=445.90  Aligned_cols=252  Identities=19%  Similarity=0.258  Sum_probs=209.0

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh--hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~--~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      .++|++++.||+|+||    +||+|+++.     +|+.||||+++...  ..+.+.+|+++|++++      |||||+++
T Consensus        28 ~d~Y~i~~~lG~G~fg----~V~~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~   92 (352)
T d1koba_          28 YDYYDILEELGSGAFG----VVHRCVEKA-----TGRVFVAKFINTPYPLDKYTVKNEISIMNQLH------HPKLINLH   92 (352)
T ss_dssp             GGTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC------STTBCCEE
T ss_pred             ccceEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEECCcchhHHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            4789999999999999    999999998     89999999997632  3456689999999994      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      ++|.     +.+.+||||| ||++|+|.+++...+        .+|+|                    ..++.|+.||+.
T Consensus        93 ~~~~-----~~~~~~ivmE-~~~gg~L~~~~~~~~--------~~l~e--------------------~~~~~i~~qi~~  138 (352)
T d1koba_          93 DAFE-----DKYEMVLILE-FLSGGELFDRIAAED--------YKMSE--------------------AEVINYMRQACE  138 (352)
T ss_dssp             EEEE-----CSSEEEEEEE-CCCCCBHHHHTTCTT--------CCBCH--------------------HHHHHHHHHHHH
T ss_pred             EEEE-----ECCEEEEEEE-cCCCChHHHHHHhcC--------CCCCH--------------------HHHHHHHHHHHH
Confidence            9999     8899999999 999999999876543        24666                    457889999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcC-CCCeEEEeeecccccccCCC--------CCCCCcccccCCCCCCchhhHHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISP-VDRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFM  313 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~-~~~~vKL~DFGlA~~~~~~~--------~~Y~APE~l~~~~~ys~ksDIWSLGvi  313 (667)
                      ||+|||++||+||||||+|||++. .++.+||+|||+|..+....        +.|+|||++ .+..|+.++|||||||+
T Consensus       139 aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvi  217 (352)
T d1koba_         139 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVL  217 (352)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHH-cCCCCCCccchHHHHHH
Confidence            999999999999999999999983 36899999999998765443        789999955 45669999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHH
Q 005958          314 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLD  393 (667)
Q Consensus       314 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~e  393 (667)
                      +|||++|++||.            +.........   +......   ........+++++++||.+||++||++|||++|
T Consensus       218 lyelltG~~Pf~------------~~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e  279 (352)
T d1koba_         218 GYVLLSGLSPFA------------GEDDLETLQN---VKRCDWE---FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD  279 (352)
T ss_dssp             HHHHHHSCCSSC------------CSSHHHHHHH---HHHCCCC---CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCC------------CCCHHHHHHH---HHhCCCC---CCcccccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999999999995            3233222222   2222111   112234578999999999999999999999999


Q ss_pred             HHcCCCCCCCC
Q 005958          394 ALRHPFLCGPR  404 (667)
Q Consensus       394 lL~HPwf~~~~  404 (667)
                      +|+||||++..
T Consensus       280 il~Hp~~~~~~  290 (352)
T d1koba_         280 ALEHPWLKGDH  290 (352)
T ss_dssp             HHTSTTTSSCC
T ss_pred             HhcCHhhCCCc
Confidence            99999998754


No 16 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.8e-51  Score=426.34  Aligned_cols=250  Identities=21%  Similarity=0.265  Sum_probs=209.7

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----------hHHHHHHHHHHHHHHhhccCC
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----------AQRRGRRAIEVLKKLVRRRLM  153 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----------~~~~~~rEi~iL~~L~~~~~~  153 (667)
                      .++|++.+.||+|+||    +||+|+++.     +++.||||++.+..           ..+.+.+|+.+|++++     
T Consensus         2 ~~~y~~~~~iG~G~~g----~V~~~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----   67 (277)
T d1phka_           2 YENYEPKEILGRGVSS----VVRRCIHKP-----TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-----   67 (277)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             cccCEEceEEecCcCe----EEEEEEECC-----CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc-----
Confidence            3789999999999999    999999987     89999999997521           1235689999999996     


Q ss_pred             CCCcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHH
Q 005958          154 YHSYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLI  233 (667)
Q Consensus       154 ~HpnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i  233 (667)
                      .||||+++++++.     +++.+||||| ||++|||.++|+.++         .++|                    ..+
T Consensus        68 ~hpnIv~~~~~~~-----~~~~~~ivmE-~~~~g~L~~~l~~~~---------~l~e--------------------~~~  112 (277)
T d1phka_          68 GHPNIIQLKDTYE-----TNTFFFLVFD-LMKKGELFDYLTEKV---------TLSE--------------------KET  112 (277)
T ss_dssp             TCTTBCCEEEEEE-----CSSEEEEEEE-CCTTCBHHHHHHHHS---------SCCH--------------------HHH
T ss_pred             CCCCeEEEEeecc-----cCcceEEEEE-cCCCchHHHHHHhcC---------CCCH--------------------HHH
Confidence            5999999999999     8899999999 999999999998765         5665                    457


Q ss_pred             HHHHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC--------CCCCCCccccc-----CCCC
Q 005958          234 RLLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------GPNNSSPDSNM-----DRRQ  300 (667)
Q Consensus       234 ~~i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~-----~~~~  300 (667)
                      +.|+.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+...        ++.|+|||.+.     ....
T Consensus       113 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~  191 (277)
T d1phka_         113 RKIMRALLEVICALHKLNIVHRDLKPENILLDD-DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG  191 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCC
T ss_pred             HHHHHHHHHHHHHHHHcCCcccccccceEEEcC-CCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCC
Confidence            889999999999999999999999999999998 899999999999876543        26799999765     3456


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHh
Q 005958          301 MMIAFDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLL  380 (667)
Q Consensus       301 ys~ksDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~  380 (667)
                      |+.++||||+||++|||++|++||.            +.+.......   +......   ...+...++|+++++||.+|
T Consensus       192 ~~~~~DiwslGvilyeml~g~~Pf~------------~~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~  253 (277)
T d1phka_         192 YGKEVDMWSTGVIMYTLLAGSPPFW------------HRKQMLMLRM---IMSGNYQ---FGSPEWDDYSDTVKDLVSRF  253 (277)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSC------------CSSHHHHHHH---HHHTCCC---CCTTTGGGSCHHHHHHHHHH
T ss_pred             CCchheEcccchhhhhhccCCCCCC------------CCCHHHHHHH---HHhCCCC---CCCcccccCCHHHHHHHHHH
Confidence            7899999999999999999999995            3333332222   2222111   12234457899999999999


Q ss_pred             hhcCcCCCCCHHHHHcCCCCCC
Q 005958          381 LATKPSKRISCLDALRHPFLCG  402 (667)
Q Consensus       381 L~~DP~kRpSa~elL~HPwf~~  402 (667)
                      |++||++|||++|+|+||||++
T Consensus       254 L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         254 LVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             CCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccCChhHCcCHHHHHcCHHHHH
Confidence            9999999999999999999986


No 17 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.4e-52  Score=432.11  Aligned_cols=267  Identities=21%  Similarity=0.227  Sum_probs=202.3

Q ss_pred             EEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhh-------HHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           90 ILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA-------QRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        90 i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~-------~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      .++.||+|+||    +||+|+++.     +|+.||||+++....       .+.+.+|+++|++++      |||||+++
T Consensus         2 ~l~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~~~   66 (299)
T d1ua2a_           2 KLDFLGEGQFA----TVYKARDKN-----TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS------HPNIIGLL   66 (299)
T ss_dssp             EEEEEEEETTE----EEEEEECSS-----CCSEEEEEEC------------CTHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             cceEeccCcCe----EEEEEEECC-----CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC------CCCEeEEE
Confidence            57899999999    999999987     899999999875321       235689999999994      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++.     .++.+||||| |+.++++..++....         .++|                    ..++.+++||+.
T Consensus        67 ~~~~-----~~~~~~ivmE-~~~~~~~~~~~~~~~---------~l~~--------------------~~~~~~~~qil~  111 (299)
T d1ua2a_          67 DAFG-----HKSNISLVFD-FMETDLEVIIKDNSL---------VLTP--------------------SHIKAYMLMTLQ  111 (299)
T ss_dssp             EEEC-----CTTCCEEEEE-CCSEEHHHHHTTCCS---------SCCS--------------------SHHHHHHHHHHH
T ss_pred             eeec-----cCCceeehhh-hhcchHHhhhhhccc---------CCCH--------------------HHHHHHHHHHHH
Confidence            9998     7788999999 999966665554332         4554                    357889999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC---------CCCCCCCcccccCCCCCCchhhHHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE---------DGPNNSSPDSNMDRRQMMIAFDMRCVGFM  313 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~---------~~~~Y~APE~l~~~~~ys~ksDIWSLGvi  313 (667)
                      ||+|||++||+||||||+|||++. ++.+||+|||+|+....         +++.|+|||++.....|+.++|||||||+
T Consensus       112 aL~~lH~~~iiHrDiKp~NIli~~-~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi  190 (299)
T d1ua2a_         112 GLEYLHQHWILHRDLKPNNLLLDE-NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI  190 (299)
T ss_dssp             HHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHH
T ss_pred             HHHHhhccceecccCCcceEEecC-CCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchH
Confidence            999999999999999999999998 89999999999976644         23789999988778889999999999999


Q ss_pred             HHHHHhCCCCChh---hhhhhhhhhccCCChhHHHHHHHHHhccC--CCCCCCC-cccccCCCHHHHHHHHHhhhcCcCC
Q 005958          314 MAKMVLRELMDPL---IFTKFKSFLTKGIDPSCLREFLLQVLNRN--SSSGNTG-FQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       314 LyemltG~~PF~~---~~~~~~~~~~~g~~~~~l~~~~~~~~~~~--~~~~~~~-~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      +|||++|.+||..   .+++..++...|.+...............  ....... ....+..++++++||.+||++||++
T Consensus       191 l~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~  270 (299)
T d1ua2a_         191 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA  270 (299)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTT
T ss_pred             HHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhh
Confidence            9999999999963   22223333323322211000000000000  0000000 1123467899999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCCC
Q 005958          388 RISCLDALRHPFLCGPRWRV  407 (667)
Q Consensus       388 RpSa~elL~HPwf~~~~~~~  407 (667)
                      ||||+|+|+||||++.+.+.
T Consensus       271 R~sa~e~L~Hp~f~~~p~p~  290 (299)
T d1ua2a_         271 RITATQALKMKYFSNRPGPT  290 (299)
T ss_dssp             SCCHHHHHTSGGGTSSSCCC
T ss_pred             CcCHHHHhCCHhhCCCCCCC
Confidence            99999999999999876443


No 18 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=9.8e-52  Score=442.17  Aligned_cols=248  Identities=17%  Similarity=0.218  Sum_probs=211.1

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      .+++|++++.||+|+||    +||+|+++.     +|+.||||++.+..     ..+.+.+|+.+|+.+      +||||
T Consensus        39 ~ld~y~i~~~lG~G~fg----~Vy~a~~~~-----~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l------~hpnI  103 (350)
T d1rdqe_          39 QLDQFDRIKTLGTGSFG----RVMLVKHKE-----SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPFL  103 (350)
T ss_dssp             CGGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC------CCTTB
T ss_pred             CccCeEEEEEeecCcCc----EEEEEEECC-----CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc------CCCcE
Confidence            46899999999999999    999999998     89999999997532     234578999999999      49999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     ....+++||| |+.+|+|.+++.+.+         .++|                    ..++.|+.
T Consensus       104 v~~~~~~~-----~~~~~~~v~e-~~~~g~l~~~l~~~~---------~l~e--------------------~~~~~i~~  148 (350)
T d1rdqe_         104 VKLEFSFK-----DNSNLYMVME-YVAGGEMFSHLRRIG---------RFSE--------------------PHARFYAA  148 (350)
T ss_dssp             CCEEEEEE-----CSSEEEEEEE-CCTTCBHHHHHHHHC---------CCCH--------------------HHHHHHHH
T ss_pred             eecccccc-----cccccccccc-cccccchhhhHhhcC---------CCCH--------------------HHHHHHHH
Confidence            99999999     8889999999 999999999998765         5665                    45788999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      ||+.||.|||++|||||||||+|||++. ++++||+|||+|+.....      .+.|||||++. +..|+.++|||||||
T Consensus       149 qi~~aL~yLH~~~iiHRDIKP~NILl~~-~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~-~~~~~~~~DiwSlGv  226 (350)
T d1rdqe_         149 QIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIIL-SKGYNKAVDWWALGV  226 (350)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHT-TCCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEecCcCCHHHcccCC-CCCEEeeeceeeeecccccccccCccccCCHHHHc-CCCCCccccccchhH
Confidence            9999999999999999999999999998 899999999999877643      37899999655 456899999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCC---
Q 005958          313 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI---  389 (667)
Q Consensus       313 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRp---  389 (667)
                      ++|||++|++||.            +.....+...   +....       ...+..+++++.+||.+||++||.+|+   
T Consensus       227 ilyemltG~~Pf~------------~~~~~~~~~~---i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~kR~~~~  284 (350)
T d1rdqe_         227 LIYEMAAGYPPFF------------ADQPIQIYEK---IVSGK-------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             HHHHHHHSSCSSC------------CSSHHHHHHH---HHHCC-------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             HHHHHHhCCCCCC------------CcCHHHHHHH---HhcCC-------CCCCccCCHHHHHHHHHHhhhCHHhccccc
Confidence            9999999999995            3333332222   22221       223456899999999999999999995   


Q ss_pred             --CHHHHHcCCCCCCCCC
Q 005958          390 --SCLDALRHPFLCGPRW  405 (667)
Q Consensus       390 --Sa~elL~HPwf~~~~~  405 (667)
                        |++|+|+||||++.+|
T Consensus       285 r~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         285 KNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTTTHHHHTSGGGTTCCH
T ss_pred             cccHHHHHcCccccCCCH
Confidence              9999999999999875


No 19 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.9e-52  Score=437.17  Aligned_cols=246  Identities=20%  Similarity=0.193  Sum_probs=203.7

Q ss_pred             CeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcceEE
Q 005958           87 DFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (667)
Q Consensus        87 ~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnIv~l  161 (667)
                      .|++++.||+|+||    +||+|++..     +++.||||++....     ..+.+.+|+++|++++      |||||++
T Consensus        16 ~y~~l~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~   80 (309)
T d1u5ra_          16 LFSDLREIGHGSFG----AVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQY   80 (309)
T ss_dssp             HEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC------CTTBCCE
T ss_pred             hcEeeEEEecCCCe----EEEEEEECC-----CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC------CCCEeeE
Confidence            49999999999999    999999998     89999999997532     2245789999999994      9999999


Q ss_pred             EEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHH
Q 005958          162 HGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  241 (667)
Q Consensus       162 ~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl  241 (667)
                      ++++.     +.+.+||||| ||.+|+|..++..++         .++|                    ..++.|+.||+
T Consensus        81 ~~~~~-----~~~~~~iv~E-~~~~g~l~~~~~~~~---------~l~e--------------------~~~~~i~~qi~  125 (309)
T d1u5ra_          81 RGCYL-----REHTAWLVME-YCLGSASDLLEVHKK---------PLQE--------------------VEIAAVTHGAL  125 (309)
T ss_dssp             EEEEE-----ETTEEEEEEE-CCSEEHHHHHHHHTS---------CCCH--------------------HHHHHHHHHHH
T ss_pred             EEEEE-----ECCEEEEEEE-ecCCCchHHHHHhCC---------CCCH--------------------HHHHHHHHHHH
Confidence            99999     7789999999 999989987776654         5665                    45678999999


Q ss_pred             HHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC-----CCCCCCCcccccC--CCCCCchhhHHHHHHHH
Q 005958          242 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----DGPNNSSPDSNMD--RRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       242 ~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-----~~~~Y~APE~l~~--~~~ys~ksDIWSLGviL  314 (667)
                      .||.|||++||+||||||+|||++. ++.+||+|||+|.....     +++.|||||++.+  ...|+.++|||||||++
T Consensus       126 ~aL~yLH~~~iiHrDiKp~NILl~~-~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvil  204 (309)
T d1u5ra_         126 QGLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (309)
T ss_dssp             HHHHHHHHTTCBCCCCSGGGEEEET-TTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEeccCCCcceEEECC-CCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHH
Confidence            9999999999999999999999998 89999999999986653     3478999997754  35689999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 005958          315 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  394 (667)
Q Consensus       315 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~el  394 (667)
                      |||++|++||.+.            ....   .+..+.....+     ......+++++++||.+||++||++|||++|+
T Consensus       205 yel~~g~~Pf~~~------------~~~~---~~~~i~~~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el  264 (309)
T d1u5ra_         205 IELAERKPPLFNM------------NAMS---ALYHIAQNESP-----ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVL  264 (309)
T ss_dssp             HHHHHSSCTTTTS------------CHHH---HHHHHHHSCCC-----CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHCCCCCCCC------------CHHH---HHHHHHhCCCC-----CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            9999999998522            2211   11222222111     11234578999999999999999999999999


Q ss_pred             HcCCCCCCC
Q 005958          395 LRHPFLCGP  403 (667)
Q Consensus       395 L~HPwf~~~  403 (667)
                      |+||||...
T Consensus       265 l~Hp~~~~~  273 (309)
T d1u5ra_         265 LKHRFVLRE  273 (309)
T ss_dssp             TTCHHHHSC
T ss_pred             HhCHHhcCC
Confidence            999999764


No 20 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-51  Score=433.08  Aligned_cols=248  Identities=20%  Similarity=0.269  Sum_probs=207.5

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcce
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnIv  159 (667)
                      +++|++++.||+|+||    +||+|+++.     +++.||||++++..     ..+...+|+.++.+..     +|||||
T Consensus         1 iddy~i~~~iG~G~fg----~Vy~~~~~~-----t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~-----~hp~Iv   66 (320)
T d1xjda_           1 IEDFILHKMLGKGSFG----KVFLAEFKK-----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-----EHPFLT   66 (320)
T ss_dssp             CTTEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-----TCTTBC
T ss_pred             CCCeEEeeEEecCCCc----EEEEEEECC-----CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC-----CCCcEE
Confidence            4789999999999999    999999998     89999999997532     2245677887776432     599999


Q ss_pred             EEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          160 QVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       160 ~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      ++++++.     +.+.+||||| ||++|+|.+++....         .++|                    ..++.++.|
T Consensus        67 ~~~~~~~-----~~~~~yivmE-y~~~g~L~~~i~~~~---------~~~e--------------------~~~~~~~~q  111 (320)
T d1xjda_          67 HMFCTFQ-----TKENLFFVME-YLNGGDLMYHIQSCH---------KFDL--------------------SRATFYAAE  111 (320)
T ss_dssp             CEEEEEE-----CSSEEEEEEE-CCTTCBHHHHHHHHS---------SCCH--------------------HHHHHHHHH
T ss_pred             EEEEEEc-----cCCceeEEEe-ecCCCcHHHHhhccC---------CCCH--------------------HHHHHHHHH
Confidence            9999999     8899999999 999999999998765         5565                    457889999


Q ss_pred             HHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC---------CCCCCCcccccCCCCCCchhhHHHH
Q 005958          240 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCV  310 (667)
Q Consensus       240 Il~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~---------~~~Y~APE~l~~~~~ys~ksDIWSL  310 (667)
                      |+.||+|||++||+||||||+|||++. ++++||+|||+|+.....         .+.|+|||++. +..|+.++|||||
T Consensus       112 i~~al~ylH~~~iiHrDikp~NiL~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSl  189 (320)
T d1xjda_         112 IILGLQFLHSKGIVYRDLKLDNILLDK-DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL-GQKYNHSVDWWSF  189 (320)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHH
T ss_pred             HHHHHHHHHhCCeeeccCcccceeecC-CCceeccccchhhhcccccccccccCCCCCcCCHHHHc-CCCCCchhhhhhh
Confidence            999999999999999999999999998 899999999999865432         36799999655 5569999999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCC
Q 005958          311 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  390 (667)
Q Consensus       311 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpS  390 (667)
                      ||++|||++|++||.            |.....+...+.   ...       ...+..+++++++||.+||++||++|||
T Consensus       190 GvilyemltG~~PF~------------~~~~~~~~~~i~---~~~-------~~~p~~~s~~~~dli~~~L~~dP~~R~s  247 (320)
T d1xjda_         190 GVLLYEMLIGQSPFH------------GQDEEELFHSIR---MDN-------PFYPRWLEKEAKDLLVKLFVREPEKRLG  247 (320)
T ss_dssp             HHHHHHHHHSSCSSC------------CSSHHHHHHHHH---HCC-------CCCCTTSCHHHHHHHHHHSCSSGGGSBT
T ss_pred             hHHHHHHHhCCCCCC------------CCCHHHHHHHHH---cCC-------CCCCccCCHHHHHHHHHhcccCCCCCcC
Confidence            999999999999994            444444333332   221       1233567999999999999999999999


Q ss_pred             HH-HHHcCCCCCCCCC
Q 005958          391 CL-DALRHPFLCGPRW  405 (667)
Q Consensus       391 a~-elL~HPwf~~~~~  405 (667)
                      +. |+++||||++.+|
T Consensus       248 ~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         248 VRGDIRQHPLFREINW  263 (320)
T ss_dssp             TBSCGGGSGGGTTCCH
T ss_pred             HHHHHHhCchhccCCH
Confidence            95 8999999999775


No 21 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.3e-51  Score=425.06  Aligned_cols=272  Identities=24%  Similarity=0.303  Sum_probs=209.6

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +++|+++++||+|+||    +||+|++..     +++.||||+++...    ..+.+.+|+++|+++      +|||||+
T Consensus         1 ~d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l------~Hp~Iv~   65 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYG----VVYKARNKL-----TGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPNIVK   65 (298)
T ss_dssp             CTTEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEEC-------CCHHHHHHHHHHTTC------CCTTBCC
T ss_pred             CCCCEeccEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC------CCCcEEE
Confidence            5899999999999999    999999998     89999999997532    235678999999999      4999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++.     +.+.+|+||| |+++ ++.+++....       ...++|                    ..++.++.||
T Consensus        66 ~~~~~~-----~~~~~~iv~e-~~~~-~~~~~~~~~~-------~~~l~e--------------------~~~~~~~~qi  111 (298)
T d1gz8a_          66 LLDVIH-----TENKLYLVFE-FLHQ-DLKKFMDASA-------LTGIPL--------------------PLIKSYLFQL  111 (298)
T ss_dssp             EEEEEE-----ETTEEEEEEE-CCSE-EHHHHHHHTT-------TTCCCH--------------------HHHHHHHHHH
T ss_pred             eccccc-----cccceeEEEe-ecCC-chhhhhhhhc-------ccCCCH--------------------HHHHHHHHHH
Confidence            999999     7789999999 9987 6666665432       124555                    4578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC---------CCCCCCCcccccCCCCCCchhhHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE---------DGPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~---------~~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      +.||+|||++|||||||||+|||++. ++.+||+|||+|+....         +.+.|+|||++.....++.++||||+|
T Consensus       112 l~~L~yLH~~~IiHrDiKpeNIl~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlG  190 (298)
T d1gz8a_         112 LQGLAFCHSHRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG  190 (298)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHHHHhhcCCEEccccCchheeecc-cCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccc
Confidence            99999999999999999999999998 89999999999976543         237899999877777789999999999


Q ss_pred             HHHHHHHhCCCCChhh---hhhhhhhhccCCChhHHHHHHHHHhc---cCCCCCC-CCcccccCCCHHHHHHHHHhhhcC
Q 005958          312 FMMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREFLLQVLN---RNSSSGN-TGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       312 viLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~~~~~~~---~~~~~~~-~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      |++|+|++|++||.+.   .....++...+.+.+...........   ..+.... ......+.+++++++||.+||++|
T Consensus       191 vily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~d  270 (298)
T d1gz8a_         191 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD  270 (298)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSS
T ss_pred             hhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCC
Confidence            9999999999999632   22233332233322211111000000   0000000 001234567899999999999999


Q ss_pred             cCCCCCHHHHHcCCCCCCCCCC
Q 005958          385 PSKRISCLDALRHPFLCGPRWR  406 (667)
Q Consensus       385 P~kRpSa~elL~HPwf~~~~~~  406 (667)
                      |++|||++|+|+||||++...+
T Consensus       271 P~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         271 PNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TTTSCCHHHHHTSGGGTTCCCC
T ss_pred             hhHCcCHHHHhCCHhhccCCCC
Confidence            9999999999999999998754


No 22 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-51  Score=434.96  Aligned_cols=251  Identities=16%  Similarity=0.248  Sum_probs=208.0

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhh-HHHHHHHHHHHHHHhhccCCCCCcceEEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA-QRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~-~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~  163 (667)
                      .++|++++.||+|+||    +||+|+++.     +++.||||+++.... ...+.+|+++|+.++      |||||++++
T Consensus         4 ~~rY~i~~~lG~G~fg----~Vy~~~~~~-----~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~   68 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFG----IVHRCVETS-----SKKTYMAKFVKVKGTDQVLVKKEISILNIAR------HRNILHLHE   68 (321)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECCCTHHHHHHHHHHHHHHHSC------CTTBCCEEE
T ss_pred             ccceEEEEEEecCCCe----EEEEEEECC-----CCcEEEEEEEcCCcccHHHHHHHHHHHHhCC------CCCCCeEEE
Confidence            4889999999999999    999999998     899999999987443 345689999999995      999999999


Q ss_pred             EEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHH
Q 005958          164 YVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  243 (667)
Q Consensus       164 ~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~a  243 (667)
                      +|.     +.+.+||||| ||+||+|.++|..++        ..++|+                    .++.|+.||+.|
T Consensus        69 ~~~-----~~~~~~lvmE-~~~gg~L~~~i~~~~--------~~l~e~--------------------~~~~i~~qi~~a  114 (321)
T d1tkia_          69 SFE-----SMEELVMIFE-FISGLDIFERINTSA--------FELNER--------------------EIVSYVHQVCEA  114 (321)
T ss_dssp             EEE-----ETTEEEEEEC-CCCCCBHHHHHTSSS--------CCCCHH--------------------HHHHHHHHHHHH
T ss_pred             EEE-----ECCEEEEEEe-cCCCCcHHHHHHhcC--------CCCCHH--------------------HHHHHHHHHHHH
Confidence            999     7789999999 999999999998653        246664                    578899999999


Q ss_pred             HHHHHHCCCcccCCCCCcEEEcCC-CCeEEEeeecccccccCCC--------CCCCCcccccCCCCCCchhhHHHHHHHH
Q 005958          244 VNYLHSHGLAHTELRLENVHISPV-DRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       244 L~yLHs~gIvHrDLKPeNILl~~~-~~~vKL~DFGlA~~~~~~~--------~~Y~APE~l~~~~~ys~ksDIWSLGviL  314 (667)
                      |+|||++||+||||||+|||++.+ ...+||+|||+++......        +.|+|||.+ ....|+.++|||||||++
T Consensus       115 l~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~-~~~~~~~~~DiWSlGvil  193 (321)
T d1tkia_         115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH-QHDVVSTATDMWSLGTLV  193 (321)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHH-TTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhc-cCCCCCchhhcccHHHHH
Confidence            999999999999999999999862 4589999999998765543        789999954 555699999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 005958          315 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  394 (667)
Q Consensus       315 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~el  394 (667)
                      |+|++|.+||.            +.....+..   .+......   .....++.+++++++||.+||++||++|||++|+
T Consensus       194 y~ll~G~~Pf~------------~~~~~~~~~---~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~ei  255 (321)
T d1tkia_         194 YVLLSGINPFL------------AETNQQIIE---NIMNAEYT---FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA  255 (321)
T ss_dssp             HHHHHSSCTTC------------CSSHHHHHH---HHHHTCCC---CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             HHHHhCCCCCC------------CCCHHHHHH---HHHhCCCC---CChhhccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            99999999995            222222222   22222111   1122345689999999999999999999999999


Q ss_pred             HcCCCCCCC
Q 005958          395 LRHPFLCGP  403 (667)
Q Consensus       395 L~HPwf~~~  403 (667)
                      |+||||++.
T Consensus       256 l~hp~~~~~  264 (321)
T d1tkia_         256 LQHPWLKQK  264 (321)
T ss_dssp             HHSHHHHSC
T ss_pred             hcCHhhccC
Confidence            999999763


No 23 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-51  Score=422.65  Aligned_cols=243  Identities=19%  Similarity=0.206  Sum_probs=203.9

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhh--------HHHHHHHHHHHHHHhhccCCCCCc
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA--------QRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~--------~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      ++|++.+.||+|+||    +||+|++..     +++.||||++.+...        ..++.+|+.+|+++++    .|||
T Consensus         4 ~~Y~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~----~h~n   70 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFG----SVYSGIRVS-----DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSG   70 (273)
T ss_dssp             TTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCS
T ss_pred             CeEEEeEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc----CCCC
Confidence            689999999999999    999999998     899999999975321        1234689999999952    3999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCC-CCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGS-FSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  236 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~-GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i  236 (667)
                      ||++++++.     +.+.+|+||| |+.+ +++.+++....         .++|+                    .++.|
T Consensus        71 Iv~~~~~~~-----~~~~~~lv~e-~~~~~~~l~~~~~~~~---------~l~e~--------------------~~~~~  115 (273)
T d1xwsa_          71 VIRLLDWFE-----RPDSFVLILE-RPEPVQDLFDFITERG---------ALQEE--------------------LARSF  115 (273)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEE-CCSSEEEHHHHHHHHC---------SCCHH--------------------HHHHH
T ss_pred             ccEEEEEEe-----eCCeEEEEEE-eccCcchHHHHHhccC---------CCCHH--------------------HHHHH
Confidence            999999999     7889999999 7754 68999988754         56664                    57789


Q ss_pred             HHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-------CCCCCCcccccCCCCCCchhhHHH
Q 005958          237 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------GPNNSSPDSNMDRRQMMIAFDMRC  309 (667)
Q Consensus       237 ~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-------~~~Y~APE~l~~~~~ys~ksDIWS  309 (667)
                      +.||+.||+|||++||+||||||+|||++.+++.+||+|||+|+.....       ++.|+|||++.+...++.++||||
T Consensus       116 ~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwS  195 (273)
T d1xwsa_         116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS  195 (273)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCccccccc
Confidence            9999999999999999999999999999974689999999999765432       378999997776666788899999


Q ss_pred             HHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCC
Q 005958          310 VGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  389 (667)
Q Consensus       310 LGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRp  389 (667)
                      |||++|||++|++||......                     ...       .......+|+++++||.+||++||++||
T Consensus       196 lGvilyell~g~~Pf~~~~~i---------------------~~~-------~~~~~~~~s~~~~~li~~~L~~dp~~R~  247 (273)
T d1xwsa_         196 LGILLYDMVCGDIPFEHDEEI---------------------IRG-------QVFFRQRVSSECQHLIRWCLALRPSDRP  247 (273)
T ss_dssp             HHHHHHHHHHSSCSCCSHHHH---------------------HHC-------CCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ceeeehhHhhCCCCCCCchHH---------------------hhc-------ccCCCCCCCHHHHHHHHHHccCCHhHCc
Confidence            999999999999999633211                     111       1123356889999999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 005958          390 SCLDALRHPFLCGPR  404 (667)
Q Consensus       390 Sa~elL~HPwf~~~~  404 (667)
                      |++|+|+||||++..
T Consensus       248 s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         248 TFEEIQNHPWMQDVL  262 (273)
T ss_dssp             CHHHHHTSGGGSSCC
T ss_pred             CHHHHhcCHhhCCCC
Confidence            999999999998864


No 24 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=2.9e-50  Score=426.00  Aligned_cols=268  Identities=21%  Similarity=0.266  Sum_probs=210.3

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGY  164 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~  164 (667)
                      .++|+++++||+|+||    +||+|+++.     +++.||||+++... .+++.+|+++|++++     +||||++++++
T Consensus        34 ~d~y~i~~~LG~G~fg----~V~~a~~~~-----~~~~vAiK~i~~~~-~~~~~~Ei~il~~l~-----~hpnIv~~~~~   98 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYS----EVFEAINIT-----NNEKVVVKILKPVK-KKKIKREIKILENLR-----GGPNIITLADI   98 (328)
T ss_dssp             GGGEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSSC-HHHHHHHHHHHHHHT-----TSTTBCCEEEE
T ss_pred             CcCeEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEECHHH-HHHHHHHHHHHHhcc-----CCCCCcEEEEE
Confidence            4789999999999999    999999988     89999999997653 456789999999996     69999999999


Q ss_pred             EEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 005958          165 VSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  244 (667)
Q Consensus       165 ~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~aL  244 (667)
                      |...   ....+++||| ||++|+|.++.+            .++|                    ..++.+++||+.||
T Consensus        99 ~~~~---~~~~~~~v~e-~~~~~~L~~~~~------------~l~e--------------------~~i~~i~~qil~aL  142 (328)
T d3bqca1          99 VKDP---VSRTPALVFE-HVNNTDFKQLYQ------------TLTD--------------------YDIRFYMYEILKAL  142 (328)
T ss_dssp             EECT---TTCSEEEEEE-CCCSCBGGGTTT------------SCCH--------------------HHHHHHHHHHHHHH
T ss_pred             EEec---CCCceeEEEe-ecCCCcHHHHhc------------CCCH--------------------HHHHHHHHHHHHHH
Confidence            9844   5678999999 999999876532            4565                    45788999999999


Q ss_pred             HHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC--------CCCCCcccccCCCCCCchhhHHHHHHHHHH
Q 005958          245 NYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMMAK  316 (667)
Q Consensus       245 ~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~--------~~Y~APE~l~~~~~ys~ksDIWSLGviLye  316 (667)
                      +|||++||+||||||+|||++.+++.+||+|||+|.......        +.|+|||.+.+...|+.++||||+||++||
T Consensus       143 ~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e  222 (328)
T d3bqca1         143 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  222 (328)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             HHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHH
Confidence            999999999999999999999746689999999998765432        679999988888889999999999999999


Q ss_pred             HHhCCCCChh----hhhhhhhhhccCCChhHHHHHHHHHhc-----------cCCCCCC---CCcccccCCCHHHHHHHH
Q 005958          317 MVLRELMDPL----IFTKFKSFLTKGIDPSCLREFLLQVLN-----------RNSSSGN---TGFQILDRNWGAGWNLLS  378 (667)
Q Consensus       317 mltG~~PF~~----~~~~~~~~~~~g~~~~~l~~~~~~~~~-----------~~~~~~~---~~~~~~~~~s~e~~dLI~  378 (667)
                      |++|+.||..    ..+...+....|.+.  ........-.           .......   ........++++++|||.
T Consensus       223 ~~~g~~pf~~~~~~~~~~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~  300 (328)
T d3bqca1         223 MIFRKEPFFHGHDNYDQLVRIAKVLGTED--LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD  300 (328)
T ss_dssp             HHHTCSSSSCCSSHHHHHHHHHHHHCHHH--HHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHH
T ss_pred             hccCCCCCCCCchhHHHHHHHHHHHCCch--hhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHH
Confidence            9999999862    222222222233211  1111111000           0000000   001123457899999999


Q ss_pred             HhhhcCcCCCCCHHHHHcCCCCCCCCC
Q 005958          379 LLLATKPSKRISCLDALRHPFLCGPRW  405 (667)
Q Consensus       379 ~~L~~DP~kRpSa~elL~HPwf~~~~~  405 (667)
                      +||++||++||||+|+|+||||+++.|
T Consensus       301 ~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         301 KLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             HHccCChhHCcCHHHHhcCcccCCCCC
Confidence            999999999999999999999999876


No 25 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=2.8e-50  Score=418.03  Aligned_cols=266  Identities=21%  Similarity=0.245  Sum_probs=208.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +++|+++++||+|+||    +||+|+++      +++.||||+++...    ..+.+.+|+.+|++++      |||||+
T Consensus         1 ~~~Y~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~   64 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYG----VVYKAQNN------YGETFALKKIRLEKEDEGIPSTTIREISILKELK------HSNIVK   64 (286)
T ss_dssp             CCSEEEEEEEEEETTE----EEEEEEET------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC------CTTBCC
T ss_pred             CCCceeccEEecCCCc----EEEEEEeC------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC------CCcEEe
Confidence            5799999999999999    99999986      58999999997532    2356789999999994      999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++.     ..+..+++|| ++.++.+..+....+         .++|                    ..++.|+.||
T Consensus        65 ~~~~~~-----~~~~~~i~~e-~~~~~~~~~~~~~~~---------~l~~--------------------~~~~~i~~qi  109 (286)
T d1ob3a_          65 LYDVIH-----TKKRLVLVFE-HLDQDLKKLLDVCEG---------GLES--------------------VTAKSFLLQL  109 (286)
T ss_dssp             EEEEEE-----CSSCEEEEEE-CCSEEHHHHHHTSTT---------CCCH--------------------HHHHHHHHHH
T ss_pred             eeeecc-----cCCceeEEEE-eehhhhHHHHHhhcC---------Ccch--------------------hhhHHHHHHH
Confidence            999999     8889999999 999866666655443         5565                    4578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC---------CCCCCCcccccCCCCCCchhhHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~---------~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      +.||+|||++|||||||||+|||++. ++.+||+|||.|......         .+.|+|||.+.+...++.++||||+|
T Consensus       110 ~~~L~~LH~~~IvHrDiKp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslG  188 (286)
T d1ob3a_         110 LNGIAYCHDRRVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG  188 (286)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             HHHHHHhccCcEEecCCCCceeeEcC-CCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcC
Confidence            99999999999999999999999998 899999999999765432         37899999888888899999999999


Q ss_pred             HHHHHHHhCCCCChh---hhhhhhhhhccCCChhHHHHHHHHHhc----cCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          312 FMMAKMVLRELMDPL---IFTKFKSFLTKGIDPSCLREFLLQVLN----RNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       312 viLyemltG~~PF~~---~~~~~~~~~~~g~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      |++|||++|++||.+   .++..+++...|.+.............    .............+..+++++|||.+||++|
T Consensus       189 v~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d  268 (286)
T d1ob3a_         189 CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD  268 (286)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSS
T ss_pred             cHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCC
Confidence            999999999999963   222333333333322111100000000    0000011112345678899999999999999


Q ss_pred             cCCCCCHHHHHcCCCCCC
Q 005958          385 PSKRISCLDALRHPFLCG  402 (667)
Q Consensus       385 P~kRpSa~elL~HPwf~~  402 (667)
                      |++|||++|+|+||||++
T Consensus       269 P~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         269 PNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTTSCCHHHHHTSGGGGC
T ss_pred             hhHCcCHHHHhcCcccCc
Confidence            999999999999999975


No 26 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-50  Score=431.47  Aligned_cols=260  Identities=18%  Similarity=0.206  Sum_probs=202.7

Q ss_pred             ccCCeEEEe-EeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           84 NMGDFKILD-RVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        84 ~~~~y~i~~-~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      .+++|++++ .||+|+||    +||+|++..     +++.||||+++..   ....+|++++.++.     +|||||+++
T Consensus         9 i~~~y~i~~~~lG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~---~~~~~E~~~~~~~~-----~hpnIv~l~   71 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGING----KVLQIFNKR-----TQEKFALKMLQDC---PKARREVELHWRAS-----QCPHIVRIV   71 (335)
T ss_dssp             GGGTEEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEECS---HHHHHHHHHHHHHT-----TSTTBCCEE
T ss_pred             cccCEEEeeEEeeeccCe----EEEEEEECC-----CCCEEEEEEECCc---HHHHHHHHHHHHhc-----CCCCCCeEE
Confidence            468999875 59999999    999999998     8999999999653   45678999987775     699999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      ++|++.. ..+..+||||| ||+||+|.++|.+++.       ..|+|                    ..++.|+.||+.
T Consensus        72 ~~~~~~~-~~~~~~~ivmE-y~~gg~L~~~i~~~~~-------~~l~e--------------------~~~~~i~~qi~~  122 (335)
T d2ozaa1          72 DVYENLY-AGRKCLLIVME-CLDGGELFSRIQDRGD-------QAFTE--------------------REASEIMKSIGE  122 (335)
T ss_dssp             EEEEEEE-TTEEEEEEEEE-CCCSEEHHHHHHSCSC-------CCEEH--------------------HHHHHHHHHHHH
T ss_pred             EEEeecc-cCCCEEEEEEE-CCCCCcHHHHHHhcCC-------CCcCH--------------------HHHHHHHHHHHH
Confidence            9997321 14578999999 9999999999986431       14554                    567889999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcC--CCCeEEEeeecccccccCC--------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISP--VDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~--~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      ||+|||++||+||||||+|||++.  .++.+||+|||+|+.....        .+.|+|||++ .+..|+.++|||||||
T Consensus       123 al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~-~~~~y~~~~DiwSlGv  201 (335)
T d2ozaa1         123 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGV  201 (335)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCC-CGGGGSHHHHHHHHHH
T ss_pred             HHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHH-cCCCCCHHHHHHhhch
Confidence            999999999999999999999986  2467999999999865443        3889999954 5566999999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHH
Q 005958          313 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  392 (667)
Q Consensus       313 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~  392 (667)
                      ++|+|++|++||.+....           .........+......   ...+....+|+++++||.+||++||++|||+.
T Consensus       202 ily~lltg~~Pf~~~~~~-----------~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  267 (335)
T d2ozaa1         202 IMYILLCGYPPFYSNHGL-----------AISPGMKTRIRMGQYE---FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT  267 (335)
T ss_dssp             HHHHHTTSSCSCEETTCC-------------------CCCSCSSS---CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             hHHHHhhCCCCCCCCCHH-----------HHHHHHHHHHhcCCCC---CCCcccccCCHHHHHHHHHHccCChhHCcCHH
Confidence            999999999999632110           0011111111100000   01112346789999999999999999999999


Q ss_pred             HHHcCCCCCCCC
Q 005958          393 DALRHPFLCGPR  404 (667)
Q Consensus       393 elL~HPwf~~~~  404 (667)
                      |+|+||||.+..
T Consensus       268 eil~hp~~~~~~  279 (335)
T d2ozaa1         268 EFMNHPWIMQST  279 (335)
T ss_dssp             HHHHSHHHHTTT
T ss_pred             HHHcCHHhhCCC
Confidence            999999997644


No 27 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-50  Score=418.25  Aligned_cols=278  Identities=20%  Similarity=0.197  Sum_probs=205.9

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      .++|+++++||+|+||    +||+|++..+    +++.||||+++...    ......+|+.+|+.|+.   .+||||++
T Consensus         6 ~~~Y~i~~~LG~G~fg----~V~~a~~~~~----~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~---~~HpnIv~   74 (305)
T d1blxa_           6 DQQYECVAEIGEGAYG----KVFKARDLKN----GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVR   74 (305)
T ss_dssp             GGTEEEEEEEEEETTE----EEEEEEETTT----TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH---TCCTTBCC
T ss_pred             cCCEEEEEEEecccCe----EEEEEEEECC----CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh---cCCCCcce
Confidence            3789999999999999    9999999762    36789999997532    22346789999988852   25999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      ++++|..........++++|| |+++|++........        ..+++                    ..++.++.||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~--------~~~~~--------------------~~~~~~~~qi  125 (305)
T d1blxa_          75 LFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPE--------PGVPT--------------------ETIKDMMFQL  125 (305)
T ss_dssp             EEEEEEEEECSSEEEEEEEEE-CCSCBHHHHHHHSCT--------TCSCH--------------------HHHHHHHHHH
T ss_pred             eeeeecccccccCceEEEEEE-eccCCchhhhhhccC--------CCCCH--------------------HHHHHHHHHH
Confidence            999997554446678999999 999966654444322        23444                    4578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC--------CCCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE--------DGPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~--------~~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      +.||+|||++||+||||||+|||++. ++.+||+|||+++....        +++.|+|||++. +..|+.++||||+||
T Consensus       126 ~~aL~yLH~~~ivHrDiKp~NILi~~-~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~-~~~y~~~~DiwSlG~  203 (305)
T d1blxa_         126 LRGLDFLHSHRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGC  203 (305)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEecCCCccEEEEcC-CCCeeecchhhhhhhcccccCCCcccChhhcCcchhc-CCCCChhehhhchHH
Confidence            99999999999999999999999998 89999999999875432        348999999654 566999999999999


Q ss_pred             HHHHHHhCCCCChhh---hhhhhhhhccCCChhHHHHHHHH--HhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          313 MMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREFLLQ--VLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       313 iLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      ++|||++|++||...   +.+..+....|.+..........  ..................+++++++||.+||++||++
T Consensus       204 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  283 (305)
T d1blxa_         204 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK  283 (305)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhH
Confidence            999999999999632   12222222222221110000000  0000000011112245578899999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 005958          388 RISCLDALRHPFLCGPR  404 (667)
Q Consensus       388 RpSa~elL~HPwf~~~~  404 (667)
                      ||||+|+|+||||++++
T Consensus       284 R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         284 RISAYSALSHPYFQDLE  300 (305)
T ss_dssp             SCCHHHHHTSGGGTTCC
T ss_pred             CcCHHHHhcChhhcCch
Confidence            99999999999999876


No 28 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-49  Score=409.30  Aligned_cols=258  Identities=22%  Similarity=0.314  Sum_probs=209.2

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch----hhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +++|+++++||+|+||    +||+|++..     +++.||||+++..    .....+.+|+.+|+.++      ||||++
T Consensus         1 ~~ry~~i~~LG~G~fg----~V~~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~niv~   65 (292)
T d1unla_           1 MQKYEKLEKIGEGTYG----TVFKAKNRE-----THEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVR   65 (292)
T ss_dssp             CCSEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC------CTTBCC
T ss_pred             CCCCEeeeEEecCcCe----EEEEEEECC-----CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC------cCCEEe
Confidence            5789999999999999    999999998     8999999999753    23456789999999994      999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++.     +....++||| ++.+++|..++...+         .+++                    ..++.++.|+
T Consensus        66 ~~~~~~-----~~~~~~iv~~-~~~~~~l~~~~~~~~---------~~~~--------------------~~~~~~~~q~  110 (292)
T d1unla_          66 LHDVLH-----SDKKLTLVFE-FCDQDLKKYFDSCNG---------DLDP--------------------EIVKSFLFQL  110 (292)
T ss_dssp             EEEEEE-----CSSEEEEEEE-CCSEEHHHHHHHTTT---------CCCH--------------------HHHHHHHHHH
T ss_pred             eccccc-----cccceeEEee-ecccccccccccccc---------ccch--------------------hHHHHHHHHH
Confidence            999999     8889999999 999989988887654         4444                    4578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC---------CCCCCcccccCCCCCCchhhHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG---------PNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~---------~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      +.||+|||++||+||||||+|||++. ++.+||+|||.|+......         +.|+|||++.....++.++||||+|
T Consensus       111 ~~aL~~lH~~~IvHrDiKP~NIli~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG  189 (292)
T d1unla_         111 LKGLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  189 (292)
T ss_dssp             HHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             HHHHHHhhcCCEeeecccCccccccc-CCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccc
Confidence            99999999999999999999999998 8899999999998765432         6788999777777789999999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCC-------------------CCCCCCcccccCCCHH
Q 005958          312 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNS-------------------SSGNTGFQILDRNWGA  372 (667)
Q Consensus       312 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~s~e  372 (667)
                      |++|||++|+.||.           .+.+.......+........                   .............+++
T Consensus       190 ~il~ell~g~~p~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  258 (292)
T d1unla_         190 CIFAELANAGRPLF-----------PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT  258 (292)
T ss_dssp             HHHHHHTTTSCCSC-----------CCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHH
T ss_pred             hHHHHHhhCCCCCC-----------CCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHH
Confidence            99999999998863           12222222121111111110                   0111222345577899


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHcCCCCCCCC
Q 005958          373 GWNLLSLLLATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       373 ~~dLI~~~L~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                      +++||.+||++||++||||+|+|+||||++..
T Consensus       259 ~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         259 GRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            99999999999999999999999999998754


No 29 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-49  Score=425.45  Aligned_cols=275  Identities=18%  Similarity=0.247  Sum_probs=210.9

Q ss_pred             CeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEEEE
Q 005958           87 DFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVS  166 (667)
Q Consensus        87 ~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~~~  166 (667)
                      +|+.+++||+|+||    +||+|+++.     +++.||||++....  ....+|+++|++++      ||||++++++|.
T Consensus        21 ~Y~~~k~LG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~--~~~~~Ei~il~~l~------h~niv~~~~~~~   83 (350)
T d1q5ka_          21 SYTDTKVIGNGSFG----VVYQAKLCD-----SGELVAIKKVLQDK--RFKNRELQIMRKLD------HCNIVRLRYFFY   83 (350)
T ss_dssp             EEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECCS--SSCCHHHHHHHHCC------CTTBCCEEEEEE
T ss_pred             CcEeeeEEeeCcCe----EEEEEEECC-----CCCEEEEEEECccc--hHHHHHHHHHHhcC------CCCCCcEEEEEE
Confidence            69999999999999    999999998     89999999997643  23357999999994      999999999996


Q ss_pred             eccc-CCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 005958          167 SHTT-SGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVN  245 (667)
Q Consensus       167 ~~~~-~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~aL~  245 (667)
                      .... .+..++||||| ||++ ++.+.+....     .....++|                    ..++.|++||+.||+
T Consensus        84 ~~~~~~~~~~~~lv~E-y~~~-~~~~~l~~~~-----~~~~~l~~--------------------~~~~~i~~qil~aL~  136 (350)
T d1q5ka_          84 SSGEKKDEVYLNLVLD-YVPE-TVYRVARHYS-----RAKQTLPV--------------------IYVKLYMYQLFRSLA  136 (350)
T ss_dssp             EC--CCSCCEEEEEEE-CCSE-EHHHHHHHHH-----HTTCCCCH--------------------HHHHHHHHHHHHHHH
T ss_pred             ecCccCCceEEEEEEe-ccCC-ccHHHHHhhh-----hccCCCCH--------------------HHHHHHHHHHHHHHH
Confidence            4422 24567899999 9998 5554443210     00124554                    567889999999999


Q ss_pred             HHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC--------CCCCCCcccccCCCCCCchhhHHHHHHHHHHH
Q 005958          246 YLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGFMMAKM  317 (667)
Q Consensus       246 yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~~~~~ys~ksDIWSLGviLyem  317 (667)
                      |||++||+||||||+|||++.++..+||+|||+|..+...        .+.|+|||++.+...|+.++||||+||++|||
T Consensus       137 yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el  216 (350)
T d1q5ka_         137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL  216 (350)
T ss_dssp             HHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEeh
Confidence            9999999999999999999984458999999999876443        27899999888888899999999999999999


Q ss_pred             HhCCCCChh---hhhhhhhhhccCCChhHHHHHHHHHh-ccCCCCC-CC--CcccccCCCHHHHHHHHHhhhcCcCCCCC
Q 005958          318 VLRELMDPL---IFTKFKSFLTKGIDPSCLREFLLQVL-NRNSSSG-NT--GFQILDRNWGAGWNLLSLLLATKPSKRIS  390 (667)
Q Consensus       318 ltG~~PF~~---~~~~~~~~~~~g~~~~~l~~~~~~~~-~~~~~~~-~~--~~~~~~~~s~e~~dLI~~~L~~DP~kRpS  390 (667)
                      ++|++||..   .+++..++...|.+............ ....+.. ..  .....+..++++++||.+||++||++|||
T Consensus       217 ~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  296 (350)
T d1q5ka_         217 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  296 (350)
T ss_dssp             HHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC
Confidence            999999973   34455555666766544332221111 1111100 00  01123467899999999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 005958          391 CLDALRHPFLCGPRW  405 (667)
Q Consensus       391 a~elL~HPwf~~~~~  405 (667)
                      |.|+|+||||++...
T Consensus       297 a~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         297 PLEACAHSFFDELRD  311 (350)
T ss_dssp             HHHHHTSGGGGGGGC
T ss_pred             HHHHhcCHhhccccC
Confidence            999999999988653


No 30 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-49  Score=421.69  Aligned_cols=273  Identities=21%  Similarity=0.294  Sum_probs=209.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch----hhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      -++|+++++||+|+||    +||+|+++.     +|+.||||++++.    ...+.+.+|+++|++++      |||||+
T Consensus        17 ~~~Y~~i~~lG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------hpniv~   81 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYG----AVCSAVDGR-----TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR------HENVIG   81 (346)
T ss_dssp             BSSEEEEEEC----------CEEEEEETT-----TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC------BTTBCC
T ss_pred             CCcEEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC------CCCeeE
Confidence            4789999999999999    999999998     8999999999752    22356789999999995      999999


Q ss_pred             EEEEEEeccc-CCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          161 VHGYVSSHTT-SGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       161 l~~~~~~~~~-~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      ++++|..... .....+||||| |++. +|..+++..          .|++                    ..++.+++|
T Consensus        82 l~~~~~~~~~~~~~~~~~lv~e-~~~~-~l~~~~~~~----------~l~~--------------------~~~~~~~~q  129 (346)
T d1cm8a_          82 LLDVFTPDETLDDFTDFYLVMP-FMGT-DLGKLMKHE----------KLGE--------------------DRIQFLVYQ  129 (346)
T ss_dssp             CSEEECSCSSTTTCCCCEEEEE-CCSE-EHHHHHHHC----------CCCH--------------------HHHHHHHHH
T ss_pred             EEEEeccCccccccceEEEEEe-cccc-cHHHHHHhc----------cccH--------------------HHHHHHHHH
Confidence            9999974321 23446899999 9965 888887653          4665                    457889999


Q ss_pred             HHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------CCCCCCcccccCCCCCCchhhHHHHHHH
Q 005958          240 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  313 (667)
Q Consensus       240 Il~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------~~~Y~APE~l~~~~~ys~ksDIWSLGvi  313 (667)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....      .+.|+|||++.+...++.++||||+||+
T Consensus       130 i~~aL~~LH~~~IiHrDiKp~NIL~~~-~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (346)
T d1cm8a_         130 MLKGLRYIHAAGIIHRDLKPGNLAVNE-DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  208 (346)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccccCcchhhccc-ccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHH
Confidence            999999999999999999999999998 999999999999876543      3789999988888888999999999999


Q ss_pred             HHHHHhCCCCChhh---hhhhhhhhccCCChhHHHHHH-----HHHhccCCCCCCCC-cccccCCCHHHHHHHHHhhhcC
Q 005958          314 MAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREFL-----LQVLNRNSSSGNTG-FQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       314 LyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~~-----~~~~~~~~~~~~~~-~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      +|||++|++||...   ..+.......+.++....+..     .............. .......+++++|||.+||++|
T Consensus       209 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  288 (346)
T d1cm8a_         209 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD  288 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCC
Confidence            99999999999742   233333334444443322111     11111111111111 2345678999999999999999


Q ss_pred             cCCCCCHHHHHcCCCCCCCCC
Q 005958          385 PSKRISCLDALRHPFLCGPRW  405 (667)
Q Consensus       385 P~kRpSa~elL~HPwf~~~~~  405 (667)
                      |++||||+|+|+||||++...
T Consensus       289 P~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         289 AEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             TTTSCCHHHHHHSGGGTTTC-
T ss_pred             hhHCcCHHHHhcChhhCcCCC
Confidence            999999999999999998763


No 31 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4.7e-49  Score=410.00  Aligned_cols=247  Identities=17%  Similarity=0.221  Sum_probs=204.2

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        80 ~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      .+++..++|++.+.||+|+||    +||+|+++.     +++.||||+++... ..+++.+|+++|++++      ||||
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~------HpnI   75 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYG----EVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNL   75 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTS----SEEEEEEGG-----GTEEEEEEECCTTCSCHHHHHHHHHHHHHCC------CTTB
T ss_pred             ccEecHHHeEEeeEEeeCCCe----EEEEEEECC-----CCeEEEEEEECCccchHHHHHHHHHHHHhCC------CCCE
Confidence            456677899999999999999    999999998     79999999997643 3456899999999995      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     +.+.+||||| ||++|+|.+++.....       ..+++                    ..+..|+.
T Consensus        76 v~~~~~~~-----~~~~~~iv~E-~~~~g~l~~~l~~~~~-------~~~~~--------------------~~~~~i~~  122 (287)
T d1opja_          76 VQLLGVCT-----REPPFYIITE-FMTYGNLLDYLRECNR-------QEVSA--------------------VVLLYMAT  122 (287)
T ss_dssp             CCEEEEEC-----SSSSCEEEEE-CCTTCBHHHHHHHSCT-------TTSCH--------------------HHHHHHHH
T ss_pred             ecCCccEe-----eCCeeEEEee-cccCcchHHHhhhccc-------cchHH--------------------HHHHHHHH
Confidence            99999998     7788999999 9999999999976431       23444                    45788999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC----------CCCCCcccccCCCCCCchhhHH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMR  308 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~----------~~Y~APE~l~~~~~ys~ksDIW  308 (667)
                      ||+.||+|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++|||
T Consensus       123 qi~~gL~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~k~Diw  200 (287)
T d1opja_         123 QISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVW  200 (287)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHH-HCCCSHHHHHH
T ss_pred             HHHHHHHHHHHCCcccCccccCeEEECC-CCcEEEccccceeecCCCCceeeccccccccccChHHHc-CCCCCchhhhh
Confidence            9999999999999999999999999998 8999999999998765432          5699999655 45699999999


Q ss_pred             HHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCC
Q 005958          309 CVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  388 (667)
Q Consensus       309 SLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kR  388 (667)
                      ||||++|||++|..||.           .+.+...+.+.+....         ..+.+..+++++++||.+||+.||++|
T Consensus       201 S~Gv~l~ell~~~~p~~-----------~~~~~~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~R  260 (287)
T d1opja_         201 AFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDR  260 (287)
T ss_dssp             HHHHHHHHHHTTSCCSS-----------TTCCHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hHHHHHHHHHhCCCCCC-----------CcchHHHHHHHHhcCC---------CCCCCccchHHHHHHHHHHcCCCHhHC
Confidence            99999999999766542           2333333333332211         123445788999999999999999999


Q ss_pred             CCHHHHHc
Q 005958          389 ISCLDALR  396 (667)
Q Consensus       389 pSa~elL~  396 (667)
                      ||++|+++
T Consensus       261 ps~~ei~~  268 (287)
T d1opja_         261 PSFAEIHQ  268 (287)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999976


No 32 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-48  Score=411.86  Aligned_cols=262  Identities=20%  Similarity=0.236  Sum_probs=198.6

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +++|+++++||+|+||    +||+|++..     +|+.||||++....    ....+.+|+++|++++      ||||++
T Consensus         9 ~~rY~i~~~LG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~nii~   73 (318)
T d3blha1           9 VSKYEKLAKIGQGTFG----EVFKARHRK-----TGQKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVN   73 (318)
T ss_dssp             GGGEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC------CTTBCC
T ss_pred             cCCEEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc------CCCccc
Confidence            5899999999999999    999999997     89999999986532    2356789999999995      999999


Q ss_pred             EEEEEEecc---cCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          161 VHGYVSSHT---TSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       161 l~~~~~~~~---~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      +++++....   ....+.+|+||| |++++.+..+.....         .+++                    ..++.++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iv~e-~~~~~~~~~~~~~~~---------~~~~--------------------~~~~~i~  123 (318)
T d3blha1          74 LIEICRTKASPYNRCKGSIYLVFD-FCEHDLAGLLSNVLV---------KFTL--------------------SEIKRVM  123 (318)
T ss_dssp             EEEEEEC----------CEEEEEE-CCCEEHHHHHTCTTC---------CCCH--------------------HHHHHHH
T ss_pred             eEeeeecccccccccCceEEEEEe-ccCCCccchhhhccc---------cccc--------------------HHHHHHH
Confidence            999986321   113567999999 999855544333222         3443                    5678899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC-------------CCCCCCCcccccCCCCCCch
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-------------DGPNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-------------~~~~Y~APE~l~~~~~ys~k  304 (667)
                      +||+.||.|||++||+||||||+|||++. ++.+||+|||+|+.+..             +++.|+|||++.+...|+.+
T Consensus       124 ~qil~~l~~lH~~~ivHrDlKp~NILl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k  202 (318)
T d3blha1         124 QMLLNGLYYIHRNKILHRDMKAANVLITR-DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPP  202 (318)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHhccCCEEecCcCchheeecC-CCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcH
Confidence            99999999999999999999999999998 89999999999975542             23679999988888889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCc-----------------cc--
Q 005958          305 FDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGF-----------------QI--  365 (667)
Q Consensus       305 sDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~--  365 (667)
                      +||||+||++|||++|++||.+            .........+........+......                 ..  
T Consensus       203 ~DiwSlGvil~el~~g~~pf~~------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T d3blha1         203 IDLWGAGCIMAEMWTRSPIMQG------------NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  270 (318)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCC------------SSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHH
T ss_pred             HHcccCCceeeeHhhCCCCCCC------------CCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchh
Confidence            9999999999999999999962            2222222222222222111110000                 00  


Q ss_pred             ---ccCCCHHHHHHHHHhhhcCcCCCCCHHHHHcCCCCCCCC
Q 005958          366 ---LDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       366 ---~~~~s~e~~dLI~~~L~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                         ....+++++|||.+||++||++||||+|+|+||||+..+
T Consensus       271 ~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         271 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             HHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCC
Confidence               012467899999999999999999999999999998753


No 33 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-48  Score=415.10  Aligned_cols=271  Identities=18%  Similarity=0.217  Sum_probs=204.6

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      ++|++++.||+|+||    +||+|+++.     +++.||||++.+..   ..+.+.+|+++|++++      ||||++++
T Consensus         8 ~rY~~~~~LG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~------hp~iv~~~   72 (345)
T d1pmea_           8 PRYTNLSYIGEGAYG----MVCSAYDNV-----NKVRVAIKKISPFEHQTYCQRTLREIKILLRFR------HENIIGIN   72 (345)
T ss_dssp             TTEEEEEECC---CC----CEEEEEETT-----TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC------CTTBCCCC
T ss_pred             CCeEEEEEEeeccCe----EEEEEEECC-----CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC------CCCCCcEE
Confidence            579999999999999    999999988     89999999997532   3346789999999994      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++..+.......+|++|+ ++ +|+|.+++...          .++|                    ..++.++.||+.
T Consensus        73 ~~~~~~~~~~~~~~~l~~~-~~-~g~L~~~l~~~----------~l~~--------------------~~i~~i~~qil~  120 (345)
T d1pmea_          73 DIIRAPTIEQMKDVYLVTH-LM-GADLYKLLKTQ----------HLSN--------------------DHICYFLYQILR  120 (345)
T ss_dssp             EEECCSSTTTCCCEEEEEE-CC-CEEHHHHHHHC----------CCCH--------------------HHHHHHHHHHHH
T ss_pred             EEEeeccccccceEEEEEe-ec-CCchhhhhhcC----------CCCH--------------------HHHHHHHHHHHH
Confidence            9997543334455677666 55 56999999764          4555                    467889999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC------------CCCCCCCcccccCCCCCCchhhHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE------------DGPNNSSPDSNMDRRQMMIAFDMRCV  310 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~------------~~~~Y~APE~l~~~~~ys~ksDIWSL  310 (667)
                      ||+|||++|||||||||+|||++. ++.+||+|||+|.....            +.+.|+|||++.....|+.++||||+
T Consensus       121 al~yLH~~~iiHRDIKp~NILl~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSl  199 (345)
T d1pmea_         121 GLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV  199 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHH
T ss_pred             HHHHHHHCCCcCCCCCcceEEECC-CCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhcc
Confidence            999999999999999999999998 89999999999975432            22679999987777889999999999


Q ss_pred             HHHHHHHHhCCCCChhh---hhhhhhhhccCCChhHHH------HHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhh
Q 005958          311 GFMMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLR------EFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLL  381 (667)
Q Consensus       311 GviLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L  381 (667)
                      ||++|||++|++||...   +.........+.+.....      .....................+..++++++||.+||
T Consensus       200 G~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  279 (345)
T d1pmea_         200 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML  279 (345)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHS
T ss_pred             CceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHc
Confidence            99999999999999732   122222222222221110      000011111111111111345678899999999999


Q ss_pred             hcCcCCCCCHHHHHcCCCCCCCC
Q 005958          382 ATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       382 ~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                      ++||++||||+|+|+||||+...
T Consensus       280 ~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         280 TFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             CSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             cCChhHCcCHHHHhcCHhhccCC
Confidence            99999999999999999998754


No 34 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-48  Score=412.08  Aligned_cols=272  Identities=14%  Similarity=0.107  Sum_probs=205.4

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      +++..++|++++.||+|+||    +||+|++...........||+|.+....   ....+.+|+.+|.++.     +|||
T Consensus        32 wei~~~~~~l~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~Hpn  102 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFG----KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-----SHEN  102 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSE----EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTT
T ss_pred             ccCCHHHeEEeeEEeeCCCe----EEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc-----CCCc
Confidence            45666899999999999999    9999999874333345689999986532   3345789999999995     5999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcC--CCCCCCCCccccHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVG--DDSIGGPAASRQLRLIRL  235 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~--~~~~~~~~~~~~~~~i~~  235 (667)
                      ||++++++.     +.+.+||||| ||++|+|.++|+.+..        .+++.......  .-........++...++.
T Consensus       103 Iv~l~~~~~-----~~~~~~lv~E-y~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  168 (325)
T d1rjba_         103 IVNLLGACT-----LSGPIYLIFE-YCCYGDLLNYLRSKRE--------KFSEDEIEYENQKRLEEEEDLNVLTFEDLLC  168 (325)
T ss_dssp             BCCEEEEEC-----SSSSCEEEEE-CCTTCBHHHHHHTTTT--------CC---------------------CCHHHHHH
T ss_pred             EeEEEEEEe-----eCCeEEEEEE-cCCCCcHHHHHHhccC--------CCcchhhhhccccccccccccCCCCHHHHHH
Confidence            999999998     7788999999 9999999999987542        11111100000  000011123455678899


Q ss_pred             HHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-----------CCCCCCcccccCCCCCCch
Q 005958          236 LMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       236 i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-----------~~~Y~APE~l~~~~~ys~k  304 (667)
                      |+.||+.||+|||++|||||||||+|||++. ++.+||+|||+|+.....           ++.|||||++. ...|+.+
T Consensus       169 i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~  246 (325)
T d1rjba_         169 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIK  246 (325)
T ss_dssp             HHHHHHHHHHHHHHTTEEETTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHH
T ss_pred             HHHHHHHHHHHHHhCCeeeccCchhcccccc-CCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc-CCCCCcc
Confidence            9999999999999999999999999999998 899999999999765433           25799999654 4569999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhc
Q 005958          305 FDMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLAT  383 (667)
Q Consensus       305 sDIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~  383 (667)
                      +|||||||++|||++ |++||.+.           .....+.+.+....         ..+.+..+++++++||.+||+.
T Consensus       247 ~DiwS~Gvil~emlt~g~~Pf~~~-----------~~~~~~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~  306 (325)
T d1rjba_         247 SDVWSYGILLWEIFSLGVNPYPGI-----------PVDANFYKLIQNGF---------KMDQPFYATEEIYIIMQSCWAF  306 (325)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTC-----------CCSHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCS
T ss_pred             eeccchhHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHhcCC---------CCCCCCcCCHHHHHHHHHHcCC
Confidence            999999999999997 89999632           11222333322211         1234457889999999999999


Q ss_pred             CcCCCCCHHHHHcC
Q 005958          384 KPSKRISCLDALRH  397 (667)
Q Consensus       384 DP~kRpSa~elL~H  397 (667)
                      ||++|||++||++|
T Consensus       307 dP~~RPt~~ei~~~  320 (325)
T d1rjba_         307 DSRKRPSFPNLTSF  320 (325)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999986


No 35 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-48  Score=397.59  Aligned_cols=241  Identities=16%  Similarity=0.173  Sum_probs=192.4

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      ..++|++++.||+|+||    +||+|++.      +++.||||+++... ..+++.+|++++++++      |||||+++
T Consensus         3 dp~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~   66 (263)
T d1sm2a_           3 DPSELTFVQEIGSGQFG----LVHLGYWL------NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------HPKLVQLY   66 (263)
T ss_dssp             CCSCEEEEEEEECCSSC----CEEEEEET------TTEEEEEEECCSSSSCHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             ChHHcEEEEEEeeCCCe----EEEEEEEC------CCCEEEEEEECCCcCcHHHHHHHHHHHHhcC------CCCccccc
Confidence            34789999999999999    99999987      46789999997633 4467899999999995      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++.     ..+.+|+||| |+++|+|.+++....        ..+++                    ..+..|+.||+.
T Consensus        67 g~~~-----~~~~~~lv~E-~~~~g~L~~~l~~~~--------~~~~~--------------------~~~~~i~~qia~  112 (263)
T d1sm2a_          67 GVCL-----EQAPICLVFE-FMEHGCLSDYLRTQR--------GLFAA--------------------ETLLGMCLDVCE  112 (263)
T ss_dssp             EEEC-----SSSSCEEEEE-CCTTCBHHHHHHTTT--------TCCCH--------------------HHHHHHHHHHHH
T ss_pred             ceec-----cCCceEEEEE-ecCCCcHHHHhhccc--------cCCCH--------------------HHHHHHHHHHHH
Confidence            9998     7788999999 999999999987643        13444                    456779999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC----------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~----------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      ||+|||+++|+||||||+|||++. ++.+||+|||+|+.....          .+.|+|||++. ...|+.++|||||||
T Consensus       113 gl~~lH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gv  190 (263)
T d1sm2a_         113 GMAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSRYSSKSDVWSFGV  190 (263)
T ss_dssp             HHHHHHHTTCCCTTCSGGGEEECG-GGCEEECSCC------------------CTTSCCHHHHT-TCCCCHHHHHHHHHH
T ss_pred             HHHhhhccceeecccchhheeecC-CCCeEecccchheeccCCCceeecceecCcccCChHHhc-CCCCCchhhhcchHH
Confidence            999999999999999999999998 899999999999865432          26799999654 556999999999999


Q ss_pred             HHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCH
Q 005958          313 MMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISC  391 (667)
Q Consensus       313 iLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa  391 (667)
                      ++|||++ |.+||.            +....++.+.+.....         ...+..+++++.+||.+||+.||++|||+
T Consensus       191 il~el~t~~~~~~~------------~~~~~~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~~p~~Rps~  249 (263)
T d1sm2a_         191 LMWEVFSEGKIPYE------------NRSNSEVVEDISTGFR---------LYKPRLASTHVYQIMNHCWKERPEDRPAF  249 (263)
T ss_dssp             HHHHHHTTSCCTTC------------SCCHHHHHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHCCCCCCC------------CCCHHHHHHHHHhcCC---------CCCccccCHHHHHHHHHHccCCHhHCcCH
Confidence            9999999 466653            2233333333322111         12234578899999999999999999999


Q ss_pred             HHHHcC
Q 005958          392 LDALRH  397 (667)
Q Consensus       392 ~elL~H  397 (667)
                      +|+++|
T Consensus       250 ~~il~~  255 (263)
T d1sm2a_         250 SRLLRQ  255 (263)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999986


No 36 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-48  Score=412.46  Aligned_cols=259  Identities=17%  Similarity=0.260  Sum_probs=208.6

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch------hhHHHHHHHHHHHHHHhhccCCCC
Q 005958           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV------QAQRRGRRAIEVLKKLVRRRLMYH  155 (667)
Q Consensus        82 ~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~------~~~~~~~rEi~iL~~L~~~~~~~H  155 (667)
                      .+.+++|++++.||+|+||    +||+|++...  ..+|+.||||++++.      ...+.+.+|+++|++++     +|
T Consensus        20 ~~~l~~y~~~~~IG~G~fg----~Vy~~~~~~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~-----h~   88 (322)
T d1vzoa_          20 KVGIENFELLKVLGTGAYG----KVFLVRKISG--HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QS   88 (322)
T ss_dssp             CCCGGGEEEEEEEEETTTE----EEEEEEECSS--TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-----TC
T ss_pred             ccchhceEEEEEEecCCCe----EEEEEEECcc--CCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc-----CC
Confidence            3467999999999999999    9999998542  127899999998752      12345689999999997     46


Q ss_pred             CcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHH
Q 005958          156 SYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRL  235 (667)
Q Consensus       156 pnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~  235 (667)
                      |||+++++++.     +...+++||| |+.+|+|.+++...+         .+.|                    ..++.
T Consensus        89 pnIv~~~~~~~-----~~~~~~~v~e-~~~~~~L~~~i~~~~---------~~~e--------------------~~~~~  133 (322)
T d1vzoa_          89 PFLVTLHYAFQ-----TETKLHLILD-YINGGELFTHLSQRE---------RFTE--------------------HEVQI  133 (322)
T ss_dssp             TTBCCEEEEEE-----ETTEEEEEEC-CCCSCBHHHHHHHHS---------CCCH--------------------HHHHH
T ss_pred             CeEEEeeeeec-----cCCceeeeee-cccccHHHHHHHhcc---------cccH--------------------HHHHH
Confidence            99999999999     7789999999 999999999998765         4444                    45778


Q ss_pred             HHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC----------CCCCCCcccccCCC-CCCch
Q 005958          236 LMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRR-QMMIA  304 (667)
Q Consensus       236 i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~----------~~~Y~APE~l~~~~-~ys~k  304 (667)
                      ++.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+...          .+.|+|||.+.+.. .++.+
T Consensus       134 ~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~k  212 (322)
T d1vzoa_         134 YVGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA  212 (322)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHHHHhhcCCEEeccCCccceeecC-CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCch
Confidence            9999999999999999999999999999998 899999999999765332          37899999776543 57889


Q ss_pred             hhHHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          305 FDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       305 sDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      +|||||||+||||++|++||....           ................       .+.+..+++++++||.+||++|
T Consensus       213 sDIWSlG~iLyelltG~~PF~~~~-----------~~~~~~~i~~~~~~~~-------~~~~~~~s~~~~~li~~~l~~d  274 (322)
T d1vzoa_         213 VDWWSLGVLMYELLTGASPFTVDG-----------EKNSQAEISRRILKSE-------PPYPQEMSALAKDLIQRLLMKD  274 (322)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTT-----------SCCCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSS
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHHhcccCC-------CCCcccCCHHHHHHHHHHcccC
Confidence            999999999999999999995221           1111222222222221       1234568999999999999999


Q ss_pred             cCCCC-----CHHHHHcCCCCCCCCC
Q 005958          385 PSKRI-----SCLDALRHPFLCGPRW  405 (667)
Q Consensus       385 P~kRp-----Sa~elL~HPwf~~~~~  405 (667)
                      |++||     |++|+|+||||+++.|
T Consensus       275 P~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         275 PKKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             GGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHcCCCCcccHHHHHcCHhhcCCCH
Confidence            99999     5899999999998774


No 37 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-48  Score=412.51  Aligned_cols=273  Identities=17%  Similarity=0.210  Sum_probs=205.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch----hhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      .++|+++++||+|+||    +||+|++..     +|+.||||++.+.    ...+.+.+|+++|++++      |||||+
T Consensus        17 ~~rY~i~~~LG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------h~~iv~   81 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYG----SVCAAFDTK-----TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIG   81 (348)
T ss_dssp             ETTEEEEEECGGGTTS----SEEEEEETT-----TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             CCCeEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC------CCCeee
Confidence            3789999999999999    999999998     8999999999753    23346789999999995      999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++......+....+++|+ ++.+|+|.+++...          +++|                    ..++.+++||
T Consensus        82 ~~~~~~~~~~~~~~~~~~i~~-~~~gg~L~~~~~~~----------~l~e--------------------~~~~~i~~qi  130 (348)
T d2gfsa1          82 LLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQ----------KLTD--------------------DHVQFLIYQI  130 (348)
T ss_dssp             CSEEECSCSSTTTCCCCEEEE-ECCSEEHHHHHTTC----------CCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEeeccccccCceEEEEE-eecCCchhhhcccc----------cccH--------------------HHHHHHHHHH
Confidence            999997443223334455566 56677999998653          4665                    4578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC------CCCCCcccccCCCCCCchhhHHHHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------PNNSSPDSNMDRRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~------~~Y~APE~l~~~~~ys~ksDIWSLGviL  314 (667)
                      +.||+|||++||+||||||+|||++. ++.+|++|||+|.......      +.|+|||++.+...++.++|||||||++
T Consensus       131 l~aL~~LH~~giiHrDiKp~NILi~~-~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l  209 (348)
T d2gfsa1         131 LRGLKYIHSADIIHRDLKPSNLAVNE-DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM  209 (348)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcccccCCccccccc-cccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHH
Confidence            99999999999999999999999998 8999999999997654432      6799999888888889999999999999


Q ss_pred             HHHHhCCCCChhh---hhhhhhhhccCCChhHHHHH-----HHHHhccCCCCCCCCc-ccccCCCHHHHHHHHHhhhcCc
Q 005958          315 AKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREF-----LLQVLNRNSSSGNTGF-QILDRNWGAGWNLLSLLLATKP  385 (667)
Q Consensus       315 yemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~-----~~~~~~~~~~~~~~~~-~~~~~~s~e~~dLI~~~L~~DP  385 (667)
                      |+|++|++||.+.   .....+....+.........     ...............+ ......+++++|||.+||++||
T Consensus       210 ~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP  289 (348)
T d2gfsa1         210 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS  289 (348)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCCh
Confidence            9999999999732   22222223333332221110     0111111111111111 2345689999999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCC
Q 005958          386 SKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       386 ~kRpSa~elL~HPwf~~~~  404 (667)
                      ++||||+|+|+||||++..
T Consensus       290 ~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         290 DKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             GGSCCHHHHHTSGGGTTTC
T ss_pred             hhCcCHHHHhcCHhhCCCC
Confidence            9999999999999999764


No 38 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-48  Score=402.84  Aligned_cols=247  Identities=17%  Similarity=0.191  Sum_probs=195.4

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcc----hhhHHHHHHHHHHHHHHhhccCCCCC
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLIS----VQAQRRGRRAIEVLKKLVRRRLMYHS  156 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~----~~~~~~~~rEi~iL~~L~~~~~~~Hp  156 (667)
                      +++..++|++++.||+|+||    +||+|+..        ..||||+++.    ....+.+.+|+++|++++      ||
T Consensus         3 wei~~~~~~~~~~lG~G~fg----~Vy~~~~~--------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~------Hp   64 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFG----TVYKGKWH--------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR------HV   64 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSC----EEEEEESS--------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC------CT
T ss_pred             cccccccEEEEEEEeeCCCc----EEEEEEEC--------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CC
Confidence            45667899999999999999    99999744        3599999874    233456789999999995      99


Q ss_pred             cceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHH
Q 005958          157 YSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  236 (667)
Q Consensus       157 nIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i  236 (667)
                      |||++++++.      .+.++|||| ||++|+|.+++...+        ..+++                    ..+..|
T Consensus        65 nIv~~~~~~~------~~~~~lv~E-y~~~g~L~~~l~~~~--------~~~~~--------------------~~~~~i  109 (276)
T d1uwha_          65 NILLFMGYST------APQLAIVTQ-WCEGSSLYHHLHIIE--------TKFEM--------------------IKLIDI  109 (276)
T ss_dssp             TBCCEEEEEC------SSSCEEEEE-CCCEEEHHHHHHTSC--------CCCCH--------------------HHHHHH
T ss_pred             CEeeeeEEEe------ccEEEEEEe-cCCCCCHHHHHhhcc--------CCCCH--------------------HHHHHH
Confidence            9999999864      356899999 999999999997643        14554                    456789


Q ss_pred             HHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC-----------CCCCCCCcccccC--CCCCCc
Q 005958          237 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMD--RRQMMI  303 (667)
Q Consensus       237 ~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~-----------~~~~Y~APE~l~~--~~~ys~  303 (667)
                      +.||+.||+|||++|||||||||+|||++. ++.+||+|||+|+....           +++.|||||++.+  ...|+.
T Consensus       110 ~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~  188 (276)
T d1uwha_         110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF  188 (276)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEEET-TSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCH
T ss_pred             HHHHHHHHHHHhcCCEeccccCHHHEEEcC-CCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCc
Confidence            999999999999999999999999999998 89999999999976532           2367999997654  346899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhc
Q 005958          304 AFDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLAT  383 (667)
Q Consensus       304 ksDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~  383 (667)
                      ++|||||||++|||++|+.||.+.           .+...+...+......  +   ........+++++++||.+||+.
T Consensus       189 ~sDiwS~Gv~l~el~tg~~Pf~~~-----------~~~~~~~~~~~~~~~~--p---~~~~~~~~~~~~l~~li~~cl~~  252 (276)
T d1uwha_         189 QSDVYAFGIVLYELMTGQLPYSNI-----------NNRDQIIFMVGRGYLS--P---DLSKVRSNCPKAMKRLMAECLKK  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTC-----------CCHHHHHHHHHHTSCC--C---CGGGSCTTCCHHHHHHHHHHTCS
T ss_pred             hhhhhhhHHHHHHHHHCCCCCCCC-----------ChHHHHHHHHhcCCCC--C---cchhccccchHHHHHHHHHHcCC
Confidence            999999999999999999999632           1122222222221111  0   11223456789999999999999


Q ss_pred             CcCCCCCHHHHHcC
Q 005958          384 KPSKRISCLDALRH  397 (667)
Q Consensus       384 DP~kRpSa~elL~H  397 (667)
                      ||++|||++|+++|
T Consensus       253 dp~~RPt~~~il~~  266 (276)
T d1uwha_         253 KRDERPLFPQILAS  266 (276)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999976


No 39 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-48  Score=401.22  Aligned_cols=249  Identities=16%  Similarity=0.219  Sum_probs=199.5

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        80 ~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      .+++..++|++.+.||+|+||    +||+|+++      +++.||||+++... ..+.+.+|+++|++++      ||||
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~------HpnI   70 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFG----EVWMGYYN------GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ------HQRL   70 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTE----EEEEEEET------TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC------CTTB
T ss_pred             CeecCHHHeEEeEEEecCCCc----EEEEEEEC------CCCEEEEEEEccCcCCHHHHHHHHHHHHhCC------CCCE
Confidence            445566899999999999999    99999986      47889999997633 3456899999999995      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.      .+.+||||| |+++|+|.+++....       ...+++                    ..+..|+.
T Consensus        71 v~~~g~~~------~~~~~iv~E-y~~~g~L~~~~~~~~-------~~~l~~--------------------~~~~~i~~  116 (272)
T d1qpca_          71 VRLYAVVT------QEPIYIITE-YMENGSLVDFLKTPS-------GIKLTI--------------------NKLLDMAA  116 (272)
T ss_dssp             CCEEEEEC------SSSCEEEEE-CCTTCBHHHHTTSHH-------HHTCCH--------------------HHHHHHHH
T ss_pred             eEEEeeec------cCCeEEEEE-eCCCCcHHHHHhhcC-------CCCCCH--------------------HHHHHHHH
Confidence            99999875      345799999 999999999875432       113454                    45778999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC----------CCCCCcccccCCCCCCchhhHH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMR  308 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~----------~~Y~APE~l~~~~~ys~ksDIW  308 (667)
                      ||+.||.|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++|||
T Consensus       117 qi~~gl~~lH~~~ivHrDiKp~NIll~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvw  194 (272)
T d1qpca_         117 QIAEGMAFIEERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN-YGTFTIKSDVW  194 (272)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH-HCEECHHHHHH
T ss_pred             HHHHHHHHHHhCCcccCccchhheeeec-ccceeeccccceEEccCCccccccccCCcccccChHHHh-CCCCCchhhhh
Confidence            9999999999999999999999999998 8999999999998764332          5799999654 45689999999


Q ss_pred             HHHHHHHHHHhC-CCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          309 CVGFMMAKMVLR-ELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       309 SLGviLyemltG-~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      ||||++|||+|| .+||.            +.....+...+.   ...      ....+..+++++++||.+||+.||++
T Consensus       195 S~Gvvl~ellt~~~~~~~------------~~~~~~~~~~i~---~~~------~~~~p~~~~~~l~~li~~cl~~~P~~  253 (272)
T d1qpca_         195 SFGILLTEIVTHGRIPYP------------GMTNPEVIQNLE---RGY------RMVRPDNCPEELYQLMRLCWKERPED  253 (272)
T ss_dssp             HHHHHHHHHHTTTCCSST------------TCCHHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhHHHHHHHHhCCCCCCC------------CCCHHHHHHHHH---hcC------CCCCcccChHHHHHHHHHHcCCCHhH
Confidence            999999999995 55543            222222222222   111      12234568899999999999999999


Q ss_pred             CCCHHHHHc--CCCCC
Q 005958          388 RISCLDALR--HPFLC  401 (667)
Q Consensus       388 RpSa~elL~--HPwf~  401 (667)
                      |||++|+++  |+||.
T Consensus       254 Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         254 RPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHhhhhhh
Confidence            999999998  77774


No 40 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1e-47  Score=402.12  Aligned_cols=246  Identities=16%  Similarity=0.148  Sum_probs=192.2

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcce
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnIv  159 (667)
                      +..++|++.+.||+|+||    +||+|+++.++.  ....||||.+...   ...+.+.+|+++|++++      |||||
T Consensus        23 i~~~~~~~~~~lG~G~fg----~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv   90 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFG----EVCSGHLKLPGK--REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNVI   90 (299)
T ss_dssp             CCGGGEEEEEEEEECSSS----EEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC------CTTBC
T ss_pred             hChhhcEEeeEEeeCCCe----EEEEEEEeCCCC--EEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCCc
Confidence            456789999999999999    999999986210  2236899998652   23456789999999995      99999


Q ss_pred             EEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          160 QVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       160 ~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      ++++++.     ..+.+|+||| ||++|+|.+++....        ..+++                    ..+..|+.|
T Consensus        91 ~l~g~~~-----~~~~~~iv~E-y~~~g~L~~~~~~~~--------~~l~~--------------------~~~~~i~~q  136 (299)
T d1jpaa_          91 HLEGVVT-----KSTPVMIITE-FMENGSLDSFLRQND--------GQFTV--------------------IQLVGMLRG  136 (299)
T ss_dssp             CEEEEEC-----SSSSCEEEEE-CCTTEEHHHHHHTTT--------TCSCH--------------------HHHHHHHHH
T ss_pred             cEEEEEe-----eCCEEEEEEE-ecCCCcceeeecccc--------CCCCH--------------------HHHHHHHHH
Confidence            9999998     7788999999 999999999988643        13554                    456789999


Q ss_pred             HHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC--------------CCCCCCcccccCCCCCCchh
Q 005958          240 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------------GPNNSSPDSNMDRRQMMIAF  305 (667)
Q Consensus       240 Il~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~--------------~~~Y~APE~l~~~~~ys~ks  305 (667)
                      |+.||.|||++||+||||||+|||++. ++.+||+|||+|+.....              .+.|+|||.+. ...|+.++
T Consensus       137 ia~gl~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~s  214 (299)
T d1jpaa_         137 IAAGMKYLADMNYVHRDLAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ-YRKFTSAS  214 (299)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC-----------------------CGGGSCHHHHH-SCCCCHHH
T ss_pred             HHHHHHHHhhCCCccCccccceEEECC-CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHh-cCCCCccc
Confidence            999999999999999999999999998 899999999999865432              25699999654 45699999


Q ss_pred             hHHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          306 DMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       306 DIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      |||||||++|||++ |++||.+            .....+...+..   .      ...+....+++++.+||.+||+.|
T Consensus       215 DvwS~Gvvl~el~t~g~~Pf~~------------~~~~~~~~~i~~---~------~~~~~~~~~~~~l~~li~~cl~~~  273 (299)
T d1jpaa_         215 DVWSYGIVMWEVMSYGERPYWD------------MTNQDVINAIEQ---D------YRLPPPMDCPSALHQLMLDCWQKD  273 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTT------------CCHHHHHHHHHT---T------CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccccchHHHHHHHhCCCCCCCC------------CCHHHHHHHHHc---C------CCCCCCccchHHHHHHHHHHcCCC
Confidence            99999999999998 8999852            233333333221   1      112334568899999999999999


Q ss_pred             cCCCCCHHHHHcC
Q 005958          385 PSKRISCLDALRH  397 (667)
Q Consensus       385 P~kRpSa~elL~H  397 (667)
                      |++|||+.|++++
T Consensus       274 P~~RPs~~ei~~~  286 (299)
T d1jpaa_         274 RNHRPKFGQIVNT  286 (299)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999998864


No 41 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-47  Score=397.82  Aligned_cols=248  Identities=16%  Similarity=0.186  Sum_probs=197.2

Q ss_pred             cccCCeEEEeE-eccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           83 FNMGDFKILDR-VSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        83 ~~~~~y~i~~~-LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      +..++|.+.+. ||+|+||    +||+|.++..+   ++..||||+++..   ...+.+.+|+++|++++      ||||
T Consensus         5 l~~~~~~~~~~~iG~G~fg----~Vy~~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~------HpnI   71 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFG----SVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------NPYI   71 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTE----EEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC------CTTB
T ss_pred             ecccCeEECCcEEecccCe----EEEEEEEecCC---CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC------CCCE
Confidence            34467889885 9999999    99999886522   4568999999753   23456789999999995      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     . +.+||||| ||++|+|.+++...+        ..+++                    ..+..|+.
T Consensus        72 v~l~g~~~-----~-~~~~lvmE-~~~~g~L~~~l~~~~--------~~l~~--------------------~~~~~i~~  116 (285)
T d1u59a_          72 VRLIGVCQ-----A-EALMLVME-MAGGGPLHKFLVGKR--------EEIPV--------------------SNVAELLH  116 (285)
T ss_dssp             CCEEEEEE-----S-SSEEEEEE-CCTTEEHHHHHTTCT--------TTSCH--------------------HHHHHHHH
T ss_pred             eeEeeeec-----c-CeEEEEEE-eCCCCcHHHHhhccc--------cCCCH--------------------HHHHHHHH
Confidence            99999987     3 35899999 999999999986542        14554                    45778999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC------------CCCCCcccccCCCCCCchhh
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------------PNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~------------~~Y~APE~l~~~~~ys~ksD  306 (667)
                      ||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+....            +.|+|||++. ...|+.++|
T Consensus       117 qi~~gL~ylH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksD  194 (285)
T d1u59a_         117 QVSMGMKYLEEKNFVHRDLAARNVLLVN-RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN-FRKFSSRSD  194 (285)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEEEE-TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH-HCEECHHHH
T ss_pred             HHHHHHHHHHhCCeecCcCchhheeecc-CCceeeccchhhhcccccccccccccccccCccccChHHHh-CCCCCccch
Confidence            9999999999999999999999999998 8999999999998654322            4699999654 456999999


Q ss_pred             HHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCc
Q 005958          307 MRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  385 (667)
Q Consensus       307 IWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP  385 (667)
                      ||||||++|||++ |++||.+            ....++...+..   ..      ..+.++.+++++.+||.+||+.||
T Consensus       195 VwS~Gv~l~E~lt~G~~Pf~~------------~~~~~~~~~i~~---~~------~~~~p~~~~~~l~~li~~cl~~~p  253 (285)
T d1u59a_         195 VWSYGVTMWEALSYGQKPYKK------------MKGPEVMAFIEQ---GK------RMECPPECPPELYALMSDCWIYKW  253 (285)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTT------------CCTHHHHHHHHT---TC------CCCCCTTCCHHHHHHHHHTTCSSG
T ss_pred             hhcchHHHHHHHhCCCCCCCC------------CCHHHHHHHHHc---CC------CCCCCCcCCHHHHHHHHHHcCCCH
Confidence            9999999999998 8999952            222233333221   11      123456788999999999999999


Q ss_pred             CCCCCHHHH---HcCCCCC
Q 005958          386 SKRISCLDA---LRHPFLC  401 (667)
Q Consensus       386 ~kRpSa~el---L~HPwf~  401 (667)
                      ++|||+.++   |+|+|+.
T Consensus       254 ~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         254 EDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHHHH
Confidence            999999887   5677763


No 42 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2.1e-47  Score=394.81  Aligned_cols=250  Identities=16%  Similarity=0.149  Sum_probs=196.6

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-----hHHHHHHHHHHHHHHhhccCCCCCcce
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnIv  159 (667)
                      .++|++.+.||+|+||    +||+|++..     +++.||||++++..     ....+.+|+++|+.+      +|||||
T Consensus         6 ~drY~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~------~hpniv   70 (277)
T d1o6ya_           6 SDRYELGEILGFGGMS----EVHLARDLR-----LHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL------NHPAIV   70 (277)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC------CCTTBC
T ss_pred             cceeEEeEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc------CCCCCC
Confidence            3779999999999999    999999998     89999999997522     234578999999998      499999


Q ss_pred             EEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          160 QVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       160 ~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      ++++++.... .....+||||| ||+||+|.+++...+         .++++                    .++.|+.|
T Consensus        71 ~~~~~~~~~~-~~~~~~~lvmE-~~~g~~L~~~~~~~~---------~l~~~--------------------~~~~i~~q  119 (277)
T d1o6ya_          71 AVYDTGEAET-PAGPLPYIVME-YVDGVTLRDIVHTEG---------PMTPK--------------------RAIEVIAD  119 (277)
T ss_dssp             CEEEEEEEEC-SSSEEEEEEEE-CCCEEEHHHHHHHHC---------SCCHH--------------------HHHHHHHH
T ss_pred             cccceeeecc-CCCceEEEEEE-CCCCCEehhhhcccC---------CCCHH--------------------HHHHHHHH
Confidence            9999997441 13346899999 999999999998765         56654                    56789999


Q ss_pred             HHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC------------CCCCCCCcccccCCCCCCchhhH
Q 005958          240 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE------------DGPNNSSPDSNMDRRQMMIAFDM  307 (667)
Q Consensus       240 Il~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~------------~~~~Y~APE~l~~~~~ys~ksDI  307 (667)
                      |+.||+|||++||+||||||+|||++. ++.++|+|||.+.....            +.+.|+|||++ ....|+.++||
T Consensus       120 i~~al~~lH~~~iiHrDiKP~NIll~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~-~~~~~~~~~Di  197 (277)
T d1o6ya_         120 ACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-RGDSVDARSDV  197 (277)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEET-TSCEEECCCTTCEECC----------------TTCCHHHH-TTCCCCHHHHH
T ss_pred             HHHHHHHHHhCCccCccccCcccccCc-cccceeehhhhhhhhccccccccccccccCcccccCHHHH-cCCCCCcceec
Confidence            999999999999999999999999998 89999999999865432            23789999965 45569999999


Q ss_pred             HHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          308 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       308 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      |||||++|||++|++||.+            ..+...   +...+.....   ......+.+++++++||.+||++||++
T Consensus       198 wSlGvilyelltG~~Pf~~------------~~~~~~---~~~~~~~~~~---~~~~~~~~~s~~l~~li~~~L~~dp~~  259 (277)
T d1o6ya_         198 YSLGCVLYEVLTGEPPFTG------------DSPVSV---AYQHVREDPI---PPSARHEGLSADLDAVVLKALAKNPEN  259 (277)
T ss_dssp             HHHHHHHHHHHHSSCSCCC------------SSHHHH---HHHHHHCCCC---CGGGTSSSCCHHHHHHHHHHTCSSGGG
T ss_pred             ccchHHHHHHHhCCCCCCC------------cCHHHH---HHHHHhcCCC---CCchhccCCCHHHHHHHHHHccCCHhH
Confidence            9999999999999999952            222221   1122221111   112334678999999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 005958          388 RISCLDALRHPFL  400 (667)
Q Consensus       388 RpSa~elL~HPwf  400 (667)
                      ||+..+.|.|+|+
T Consensus       260 R~~sa~~l~~~l~  272 (277)
T d1o6ya_         260 RYQTAAEMRADLV  272 (277)
T ss_dssp             SCSSHHHHHHHHH
T ss_pred             CHhHHHHHHHHHH
Confidence            9954444445553


No 43 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-47  Score=396.96  Aligned_cols=241  Identities=16%  Similarity=0.188  Sum_probs=192.5

Q ss_pred             eEEE-eEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh----hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           88 FKIL-DRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        88 y~i~-~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      +.+. ++||+|+||    +||+|.+....   +++.||||+++...    ..+.+.+|+++|++++      |||||+++
T Consensus         8 ~~le~k~iG~G~fG----~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~   74 (277)
T d1xbba_           8 LTLEDKELGSGNFG----TVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLD------NPYIVRMI   74 (277)
T ss_dssp             EEEEEEEEEECSSE----EEEEEEEECSS---SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC------CTTBCCEE
T ss_pred             CeecCCCcccCCCe----EEEEEEEccCC---cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC------CCCCceEE
Confidence            3443 479999999    99999876421   57899999997532    2356789999999994      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++.     . +..+|||| ||++|+|.+++.+..         .+++                    ..+..|+.||+.
T Consensus        75 g~~~-----~-~~~~lvmE-~~~~g~L~~~l~~~~---------~l~~--------------------~~~~~i~~qi~~  118 (277)
T d1xbba_          75 GICE-----A-ESWMLVME-MAELGPLNKYLQQNR---------HVKD--------------------KNIIELVHQVSM  118 (277)
T ss_dssp             EEEE-----S-SSEEEEEE-CCTTEEHHHHHHHCT---------TCCH--------------------HHHHHHHHHHHH
T ss_pred             EEec-----c-CCEEEEEE-cCCCCcHHHHHhhcc---------CCCH--------------------HHHHHHHHHHHH
Confidence            9987     3 34789999 999999999998764         4555                    456789999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------------CCCCCCcccccCCCCCCchhhHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------------GPNNSSPDSNMDRRQMMIAFDMRCV  310 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------------~~~Y~APE~l~~~~~ys~ksDIWSL  310 (667)
                      ||+|||++||+||||||+|||++. ++.+||+|||+|+.+...            .+.|+|||++. ...|+.++|||||
T Consensus       119 gl~ylH~~~iiHrDlKp~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDiwS~  196 (277)
T d1xbba_         119 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFSSKSDVWSF  196 (277)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEE-TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH-HCEEEHHHHHHHH
T ss_pred             HHhhHHhCCcccCCCcchhhcccc-cCcccccchhhhhhccccccccccccccCCCceecCchhhc-CCCCCchhhhccc
Confidence            999999999999999999999998 899999999999865432            25799999654 4568999999999


Q ss_pred             HHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCC
Q 005958          311 GFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  389 (667)
Q Consensus       311 GviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRp  389 (667)
                      ||++|||++ |++||.            +....++...+..   .      ...+.+..+++++++||.+||+.||++||
T Consensus       197 Gv~l~ellt~g~~Pf~------------~~~~~~~~~~i~~---~------~~~~~p~~~~~~~~~li~~cl~~dp~~RP  255 (277)
T d1xbba_         197 GVLMWEAFSYGQKPYR------------GMKGSEVTAMLEK---G------ERMGCPAGCPREMYDLMNLCWTYDVENRP  255 (277)
T ss_dssp             HHHHHHHHTTTCCSST------------TCCHHHHHHHHHT---T------CCCCCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             hhhhhHHhhCCCCCCC------------CCCHHHHHHHHHc---C------CCCCCCcccCHHHHHHHHHHcCCCHhHCc
Confidence            999999998 899985            2233333333321   1      11234457889999999999999999999


Q ss_pred             CHHHH---HcCCCC
Q 005958          390 SCLDA---LRHPFL  400 (667)
Q Consensus       390 Sa~el---L~HPwf  400 (667)
                      |++++   |+|+|+
T Consensus       256 s~~~i~~~L~~~~~  269 (277)
T d1xbba_         256 GFAAVELRLRNYYY  269 (277)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhCHHh
Confidence            99998   566665


No 44 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-47  Score=394.67  Aligned_cols=259  Identities=15%  Similarity=0.175  Sum_probs=204.6

Q ss_pred             cccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           79 HVIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        79 ~~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      ..+++..++|++++.||+|+||    +||+|+++.      ++.||||+++... ..+.+.+|+.+|++++      |||
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg----~Vy~~~~~~------~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~------h~n   73 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFG----EVWMGTWNG------TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEK   73 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSC----EEEEEEETT------TEEEEEEECCTTSSCHHHHHHHHHHHHHCC------CTT
T ss_pred             cceEcCHHHEEEeeEEeeCCCe----EEEEEEECC------CCEEEEEEECcccCCHHHHHHHHHHHHhcc------cCC
Confidence            4566778999999999999999    999999975      5679999997633 3456899999999994      999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      ||++++++.     + +.+++||| |+++|+|.+++....       ...+++                    ..+..|+
T Consensus        74 Iv~~~g~~~-----~-~~~~lv~E-y~~~g~l~~~~~~~~-------~~~l~~--------------------~~~~~i~  119 (285)
T d1fmka3          74 LVQLYAVVS-----E-EPIYIVTE-YMSKGSLLDFLKGET-------GKYLRL--------------------PQLVDMA  119 (285)
T ss_dssp             BCCEEEEEC-----S-SSCEEEEC-CCTTCBHHHHHSHHH-------HTTCCH--------------------HHHHHHH
T ss_pred             EeEEEEEEe-----c-CCeEEEEE-ecCCCchhhhhhhcc-------cccchH--------------------HHHHHHH
Confidence            999999986     3 45789999 999999999986531       113554                    4578899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC----------CCCCCCcccccCCCCCCchhhH
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDM  307 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~----------~~~Y~APE~l~~~~~ys~ksDI  307 (667)
                      .||+.||+|||++||+||||||+||||+. ++.+||+|||+|+.....          .+.|+|||++. ...++.++||
T Consensus       120 ~~i~~gl~~LH~~~ivH~DlKp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI  197 (285)
T d1fmka3         120 AQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDV  197 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCTTC--------------CCGGGSCHHHHH-HCCCCHHHHH
T ss_pred             HHHHHHHHHHhhhheecccccceEEEECC-CCcEEEcccchhhhccCCCceeeccccccccccChHHHh-CCCCCcHHhh
Confidence            99999999999999999999999999998 899999999999765332          26799999654 5568999999


Q ss_pred             HHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          308 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       308 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      |||||++|||++|..||.           .+....++...+....         ..+..+.+++++++||.+||+.||++
T Consensus       198 ~S~Giil~el~t~~~p~~-----------~~~~~~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~  257 (285)
T d1fmka3         198 WSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGY---------RMPCPPECPESLHDLMCQCWRKEPEE  257 (285)
T ss_dssp             HHHHHHHHHHHTTTCCSS-----------TTCCHHHHHHHHHTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hcchHHHHHHHhCCCCCC-----------CCCCHHHHHHHHHhcC---------CCCCCcccCHHHHHHHHHHcccCHhH
Confidence            999999999999654442           2333333333322211         12345678899999999999999999


Q ss_pred             CCCHHHHHc--CCCCCCCCCCCCC
Q 005958          388 RISCLDALR--HPFLCGPRWRVDP  409 (667)
Q Consensus       388 RpSa~elL~--HPwf~~~~~~~~~  409 (667)
                      |||++++++  |+||........|
T Consensus       258 Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         258 RPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             SCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             CcCHHHHHHHHhhhhcCCCCCCCC
Confidence            999999998  8999876543333


No 45 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-47  Score=391.60  Aligned_cols=241  Identities=16%  Similarity=0.178  Sum_probs=199.0

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch-hhHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~-~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      +.++|+++++||+|+||    +||+|+++      +++.||||+++.. ...+.+.+|+.++++++      ||||++++
T Consensus         2 ~~~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~------HpnIv~~~   65 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFG----VVKYGKWR------GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQLY   65 (258)
T ss_dssp             CCCCCCCCCCCCEETTE----EEEEEEET------TTEEEEEEEEESSSSCHHHHHHHHHHHHTCC------CTTBCCEE
T ss_pred             ChHHCEEeEEEecCCCe----EEEEEEEC------CCCEEEEEEECcCcCCHHHHHHHHHHHHhcC------CCceeeEE
Confidence            34789999999999999    99999986      5789999999863 34567899999999995      99999999


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  242 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~  242 (667)
                      +++.     +.+.+++||| |+++|+|.+++....        ..+++                    ..+..++.||++
T Consensus        66 g~~~-----~~~~~~iv~E-y~~~g~l~~~~~~~~--------~~~~~--------------------~~~~~i~~qi~~  111 (258)
T d1k2pa_          66 GVCT-----KQRPIFIITE-YMANGCLLNYLREMR--------HRFQT--------------------QQLLEMCKDVCE  111 (258)
T ss_dssp             EEEC-----CSSSEEEEEE-CCTTEEHHHHHHSGG--------GCCCH--------------------HHHHHHHHHHHH
T ss_pred             EEEe-----eCCceEEEEE-ccCCCcHHHhhhccc--------cCCcH--------------------HHHHHHHHHHHH
Confidence            9998     7788999999 999999999987542        13443                    457789999999


Q ss_pred             HHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC----------CCCCCcccccCCCCCCchhhHHHHHH
Q 005958          243 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       243 aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~----------~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      ||+|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++|||||||
T Consensus       112 gl~~LH~~~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~ksDiwS~G~  189 (258)
T d1k2pa_         112 AMEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGV  189 (258)
T ss_dssp             HHHHHHHTTBCCSCCSGGGEEECT-TCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHH-HCCCCHHHHHHHHHH
T ss_pred             HHHHHhhcCcccccccceeEEEcC-CCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhc-CCCCCcceeecccch
Confidence            999999999999999999999998 8999999999997654322          5699999554 456999999999999


Q ss_pred             HHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCH
Q 005958          313 MMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISC  391 (667)
Q Consensus       313 iLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa  391 (667)
                      ++|||++ |+.||.            +....++...+....         ....+...++++++||.+||+.||++|||+
T Consensus       190 ~l~el~t~g~~Pf~------------~~~~~~~~~~i~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~  248 (258)
T d1k2pa_         190 LMWEIYSLGKMPYE------------RFTNSETAEHIAQGL---------RLYRPHLASEKVYTIMYSCWHEKADERPTF  248 (258)
T ss_dssp             HHHHHHTTSCCTTT------------TSCHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             hhHhHHhcCCCCCC------------CCCHHHHHHHHHhCC---------CCCCcccccHHHHHHHHHHccCCHhHCcCH
Confidence            9999998 899985            223333333322211         123345678899999999999999999999


Q ss_pred             HHHHcC
Q 005958          392 LDALRH  397 (667)
Q Consensus       392 ~elL~H  397 (667)
                      +++|+|
T Consensus       249 ~eil~~  254 (258)
T d1k2pa_         249 KILLSN  254 (258)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999987


No 46 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-47  Score=395.09  Aligned_cols=268  Identities=16%  Similarity=0.130  Sum_probs=197.1

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      +++..++|+++++||+|+||    .||+|++.......+++.||||+++..   ...+.+.+|+.++.++.     +|+|
T Consensus         8 wei~~~~y~~~~~iG~G~fG----~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-----~h~~   78 (299)
T d1ywna1           8 WEFPRDRLKLGKPLGRGAFG----QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLN   78 (299)
T ss_dssp             HBCCGGGEEEEEEEEECSSC----EEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-----CCTT
T ss_pred             ccccHHHEEEeeEEeecCCe----EEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc-----CCCe
Confidence            34555889999999999999    999999987655567889999998753   23455688899999986     6999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      |+.+++++.    ..+..+++||| ||++|+|.++|........-   ....+.          ......++...++.|+
T Consensus        79 iv~~~~~~~----~~~~~~~iv~E-~~~~g~L~~~l~~~~~~~~~---~~~~~~----------~~~~~~l~~~~~~~~~  140 (299)
T d1ywna1          79 VVNLLGACT----KPGGPLMVIVE-FCKFGNLSTYLRSKRNEFVP---YKVAPE----------DLYKDFLTLEHLICYS  140 (299)
T ss_dssp             BCCEEEEEC----STTSCCEEEEE-CCTTCBHHHHHHHTGGGBCC------------------------CBCHHHHHHHH
T ss_pred             EEEeeeeec----cCCCeEEEEEE-ecCCCcHHHHHHhccccccc---cccchh----------hhhcccCCHHHHHHHH
Confidence            999999886    24567899999 99999999999875321100   000000          0011234557789999


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-----------CCCCCCcccccCCCCCCchhh
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-----------~~~Y~APE~l~~~~~ys~ksD  306 (667)
                      .||+.||+|||++||+||||||+|||++. ++++||+|||+|+.....           ++.|+|||++. ...|+.++|
T Consensus       141 ~qi~~gl~ylH~~~ivHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sD  218 (299)
T d1ywna1         141 FQVAKGMEFLASRKCIHRDLAARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSD  218 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECG-GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH-HCCCCHHHH
T ss_pred             HHHHHHHHHHHhCCCcCCcCCccceeECC-CCcEEEccCcchhhccccccccccCceeeCccccchhHhh-cCCCCcccc
Confidence            99999999999999999999999999998 899999999999754322           25799999655 456999999


Q ss_pred             HHHHHHHHHHHHhC-CCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCc
Q 005958          307 MRCVGFMMAKMVLR-ELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  385 (667)
Q Consensus       307 IWSLGviLyemltG-~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP  385 (667)
                      ||||||++|||++| .+||...           .....+...+....         ..+.+..+++++++||.+||+.||
T Consensus       219 iwS~Gvil~ellt~~~~p~~~~-----------~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP  278 (299)
T d1ywna1         219 VWSFGVLLWEIFSLGASPYPGV-----------KIDEEFCRRLKEGT---------RMRAPDYTTPEMYQTMLDCWHGEP  278 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTC-----------CCSHHHHHHHHHTC---------CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             eeehHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHhcCC---------CCCCCccCCHHHHHHHHHHcCCCh
Confidence            99999999999986 5677521           11222223222211         123345688999999999999999


Q ss_pred             CCCCCHHHHHcC
Q 005958          386 SKRISCLDALRH  397 (667)
Q Consensus       386 ~kRpSa~elL~H  397 (667)
                      ++|||++|+++|
T Consensus       279 ~~Rpt~~eil~~  290 (299)
T d1ywna1         279 SQRPTFSELVEH  290 (299)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999987


No 47 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.8e-47  Score=389.92  Aligned_cols=246  Identities=15%  Similarity=0.175  Sum_probs=191.5

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        82 ~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      ++..++|++++.||+|+||    +||+|++...+  ..+..||||.++..   ...+.+.+|+++|++++      ||||
T Consensus         3 ei~~~~~~l~~~iG~G~fg----~Vy~a~~~~~~--~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~------HpnI   70 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFG----DVHQGIYMSPE--NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD------HPHI   70 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSS----EEEEEEECCC----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC------CTTB
T ss_pred             CcCHHHeEEEEEEeeCCCc----EEEEEEEecCC--ceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCE
Confidence            4556899999999999999    99999987521  13567999998652   23356789999999994      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.      .+.+|+||| |+++|+|.+++....        ..+++                    ..++.++.
T Consensus        71 v~l~~~~~------~~~~~iv~E-~~~~g~l~~~~~~~~--------~~l~~--------------------~~~~~~~~  115 (273)
T d1mp8a_          71 VKLIGVIT------ENPVWIIME-LCTLGELRSFLQVRK--------YSLDL--------------------ASLILYAY  115 (273)
T ss_dssp             CCEEEEEC------SSSCEEEEE-CCTTEEHHHHHHHTT--------TTSCH--------------------HHHHHHHH
T ss_pred             eeEEEEEe------cCeEEEEEE-eccCCcHHhhhhccC--------CCCCH--------------------HHHHHHHH
Confidence            99999985      356899999 999999999987643        24554                    45788999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC----------CCCCCCcccccCCCCCCchhhHH
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDMR  308 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~----------~~~Y~APE~l~~~~~ys~ksDIW  308 (667)
                      ||+.||.|||++||+||||||+||+++. ++.+||+|||+|+.....          .+.|+|||++ ....|+.++|||
T Consensus       116 qi~~gl~ylH~~~iiHrDlKp~NIll~~-~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l-~~~~~~~~~Diw  193 (273)
T d1mp8a_         116 QLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVW  193 (273)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECC-------------------CCGGGCCHHHH-HHCCCSHHHHHH
T ss_pred             HHHHHhhhhcccCeeccccchhheeecC-CCcEEEccchhheeccCCcceeccceecCcccchhhHh-ccCCCCCccccc
Confidence            9999999999999999999999999998 899999999999865432          2579999955 455699999999


Q ss_pred             HHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          309 CVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       309 SLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      ||||++|||++ |.+||.            +.....+...+..   ..      ..+.++.+++++++||.+||+.||++
T Consensus       194 SlGvil~e~lt~g~~P~~------------~~~~~~~~~~i~~---~~------~~~~~~~~~~~~~~li~~cl~~dp~~  252 (273)
T d1mp8a_         194 MFGVCMWEILMHGVKPFQ------------GVKNNDVIGRIEN---GE------RLPMPPNCPPTLYSLMTKCWAYDPSR  252 (273)
T ss_dssp             HHHHHHHHHHTTSCCTTT------------TCCGGGHHHHHHT---TC------CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cchHHHHHHHhcCCCCCC------------CCCHHHHHHHHHc---CC------CCCCCCCCCHHHHHHHHHHcCCCHhH
Confidence            99999999998 899985            2233333333221   11      12345678999999999999999999


Q ss_pred             CCCHHHHHcC
Q 005958          388 RISCLDALRH  397 (667)
Q Consensus       388 RpSa~elL~H  397 (667)
                      |||+.|+++|
T Consensus       253 Rps~~ei~~~  262 (273)
T d1mp8a_         253 RPRFTELKAQ  262 (273)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999875


No 48 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-46  Score=402.46  Aligned_cols=270  Identities=21%  Similarity=0.269  Sum_probs=199.0

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch----hhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +++|+++++||+|+||    +||+|+++.     +|+.||||++...    .....+.+|+.+|++++      |||||+
T Consensus        16 ~~~Y~i~~~LG~G~fg----~V~~~~d~~-----t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~   80 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQG----IVCAAYDAV-----LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIS   80 (355)
T ss_dssp             ETTEEEEEECSCC--C----EEEEEEETT-----TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             cCCeEEEEEeecCcCe----EEEEEEECC-----CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC------CCCeeE
Confidence            4789999999999999    999999998     8999999999753    23345789999999994      999999


Q ss_pred             EEEEEEeccc-CCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHH
Q 005958          161 VHGYVSSHTT-SGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  239 (667)
Q Consensus       161 l~~~~~~~~~-~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~Q  239 (667)
                      ++++|..... +...++|+||| ||.+ +|.+.+..           .+++                    ..++.+++|
T Consensus        81 ~~~~f~~~~~~~~~~~~~iv~E-y~~~-~l~~~~~~-----------~~~~--------------------~~i~~~~~q  127 (355)
T d2b1pa1          81 LLNVFTPQKTLEEFQDVYLVME-LMDA-NLCQVIQM-----------ELDH--------------------ERMSYLLYQ  127 (355)
T ss_dssp             CSEEECSCCSTTTCCEEEEEEE-CCSE-EHHHHHTS-----------CCCH--------------------HHHHHHHHH
T ss_pred             EEEEEecccccccCceeEEEEe-ccch-HHHHhhhc-----------CCCH--------------------HHHHHHHHH
Confidence            9999974422 25579999999 9987 66666542           4554                    457889999


Q ss_pred             HHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC--------CCCCCCcccccCCCCCCchhhHHHHH
Q 005958          240 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVG  311 (667)
Q Consensus       240 Il~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~--------~~~Y~APE~l~~~~~ys~ksDIWSLG  311 (667)
                      |+.||.|||++||+||||||+|||++. ++.+|++|||+++.....        ++.|+|||++.+ ..|+.++||||+|
T Consensus       128 il~gl~~LH~~giiHrDlKP~Nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG  205 (355)
T d2b1pa1         128 MLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVG  205 (355)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCCCC---------------CCTTCCHHHHTT-CCCCTTHHHHHHH
T ss_pred             HHHHHHHhhhcccccccCCcccccccc-ccceeeechhhhhccccccccccccccccccChhhhcC-CCCCCCccccccc
Confidence            999999999999999999999999998 899999999998765543        378999997655 5799999999999


Q ss_pred             HHHHHHHhCCCCChh---hhhhhhhhhccCCChhHHH----HHHHHHhccCCCCCCCCc-------------ccccCCCH
Q 005958          312 FMMAKMVLRELMDPL---IFTKFKSFLTKGIDPSCLR----EFLLQVLNRNSSSGNTGF-------------QILDRNWG  371 (667)
Q Consensus       312 viLyemltG~~PF~~---~~~~~~~~~~~g~~~~~l~----~~~~~~~~~~~~~~~~~~-------------~~~~~~s~  371 (667)
                      |++|||++|++||.+   .....++....+.+.....    ..................             ......++
T Consensus       206 ~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  285 (355)
T d2b1pa1         206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS  285 (355)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred             chHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCH
Confidence            999999999999963   2222222222222221110    111111111111111111             11123467


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHcCCCCCCCC
Q 005958          372 AGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       372 e~~dLI~~~L~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                      +++|||.+||++||++||||+|+|+||||+...
T Consensus       286 ~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         286 QARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            899999999999999999999999999998743


No 49 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8e-46  Score=384.53  Aligned_cols=248  Identities=14%  Similarity=0.174  Sum_probs=192.2

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcc
Q 005958           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (667)
Q Consensus        82 ~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (667)
                      ++..+.|++.+.||+|+||    +||+|.++..+. .....||||+++..   .....+.+|+++|++++      ||||
T Consensus         3 ei~~~~~~~~~~iG~G~fG----~Vy~~~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~------H~nI   71 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFG----EVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS------HHNI   71 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSS----EEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC------CTTB
T ss_pred             cCCHHHeEeeeEEeeCCCe----EEEEEEEeCCCC-EEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC------CCCE
Confidence            3455789999999999999    999999886211 12357999999753   23345789999999995      9999


Q ss_pred             eEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHH
Q 005958          159 MQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  238 (667)
Q Consensus       159 v~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~  238 (667)
                      |++++++.     +.+.+++||| |+.+|+|.+++....        ..+++                    ..+..++.
T Consensus        72 v~~~g~~~-----~~~~~~~v~e-~~~~~~l~~~~~~~~--------~~~~~--------------------~~~~~i~~  117 (283)
T d1mqba_          72 IRLEGVIS-----KYKPMMIITE-YMENGALDKFLREKD--------GEFSV--------------------LQLVGMLR  117 (283)
T ss_dssp             CCEEEEEC-----SSSSEEEEEE-CCTTEEHHHHHHHTT--------TCSCH--------------------HHHHHHHH
T ss_pred             eeeeEEEe-----cCCceEEEEE-ecccCcchhhhhccc--------ccccH--------------------HHHHHHHH
Confidence            99999998     7788999999 999999999887643        13444                    45778999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------------CCCCCCcccccCCCCCCchhh
Q 005958          239 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------------GPNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       239 QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------------~~~Y~APE~l~~~~~ys~ksD  306 (667)
                      ||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....            .+.|+|||++. ...|+.++|
T Consensus       118 ~i~~gl~~lH~~~iiHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~~~~~sD  195 (283)
T d1mqba_         118 GIAAGMKYLANMNYVHRDLAARNILVNS-NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS-YRKFTSASD  195 (283)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCCCC-----------------CCCGGGSCHHHHH-SCCCCHHHH
T ss_pred             HHHHhhhhccccccccCccccceEEECC-CCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHc-cCCCCCccc
Confidence            9999999999999999999999999998 899999999999865332            24699999554 556999999


Q ss_pred             HHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcC
Q 005958          307 MRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  386 (667)
Q Consensus       307 IWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~  386 (667)
                      ||||||++|||++|..||.           .+....++...+....         ..+....+++++++||.+||+.||+
T Consensus       196 I~S~Gvil~el~t~~~~~~-----------~~~~~~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~  255 (283)
T d1mqba_         196 VWSFGIVMWEVMTYGERPY-----------WELSNHEVMKAINDGF---------RLPTPMDCPSAIYQLMMQCWQQERA  255 (283)
T ss_dssp             HHHHHHHHHHHHTTSCCTT-----------TTCCHHHHHHHHHTTC---------CCCCCTTCBHHHHHHHHHHTCSSTT
T ss_pred             ccccHHHHHHHHhCCCCcc-----------ccCCHHHHHHHHhccC---------CCCCchhhHHHHHHHHHHHCcCCHh
Confidence            9999999999999655542           2223333333322211         1233456789999999999999999


Q ss_pred             CCCCHHHHHc
Q 005958          387 KRISCLDALR  396 (667)
Q Consensus       387 kRpSa~elL~  396 (667)
                      +|||+.|+++
T Consensus       256 ~RPt~~eil~  265 (283)
T d1mqba_         256 RRPKFADIVS  265 (283)
T ss_dssp             TSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999986


No 50 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-46  Score=386.42  Aligned_cols=245  Identities=18%  Similarity=0.194  Sum_probs=195.2

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      +.+.+++|++++.||+|+||    .||+|+++       |..||||+++.....+.+.+|+++|++++      ||||++
T Consensus         2 w~i~~~~~~~~~~lG~G~fg----~Vy~~~~~-------~~~vAvK~i~~~~~~~~~~~E~~~l~~l~------HpnIv~   64 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFG----DVMLGDYR-------GNKVAVKCIKNDATAQAFLAEASVMTQLR------HSNLVQ   64 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSC----EEEEEEET-------TEEEEEEECCCCC--HHHHHTHHHHTTCC------CTTBCC
T ss_pred             CccCHHHeEEeEEEecCCCe----EEEEEEEC-------CeEEEEEEECcHHHHHHHHHHHHHHHhCC------CCCEee
Confidence            46778999999999999999    99999975       57899999988777788899999999995      999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++..    ..+.+|+||| |+++|+|.+++..++       ...+++                    ..+..|+.||
T Consensus        65 ~~g~~~~----~~~~~~lv~e-y~~~g~L~~~l~~~~-------~~~l~~--------------------~~~~~i~~~i  112 (262)
T d1byga_          65 LLGVIVE----EKGGLYIVTE-YMAKGSLVDYLRSRG-------RSVLGG--------------------DCLLKFSLDV  112 (262)
T ss_dssp             EEEEECC----C--CCEEEEC-CCTTEEHHHHHHHHH-------HHHCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEEe----cCCcEEEEEe-ccCCCCHHHHHHhcC-------CCCCCH--------------------HHHHHHHHHH
Confidence            9999861    3466899999 999999999997642       012443                    5578899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC------CCCCCCcccccCCCCCCchhhHHHHHHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGFMM  314 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~------~~~Y~APE~l~~~~~ys~ksDIWSLGviL  314 (667)
                      +.||.|||+++|+||||||+|||++. ++.+||+|||+++.....      ...|+|||++.+ ..|+.++|||||||++
T Consensus       113 ~~al~ylH~~~ivH~dlkp~Nil~~~-~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il  190 (262)
T d1byga_         113 CEAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILL  190 (262)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECT-TSCEEECCCCC------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHH
T ss_pred             HhhccccccCceeccccchHhheecC-CCCEeecccccceecCCCCccccccccCCChHHHhC-CCCChHHHHHhHHHHH
Confidence            99999999999999999999999998 899999999999865433      268999996654 5699999999999999


Q ss_pred             HHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHHH
Q 005958          315 AKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLD  393 (667)
Q Consensus       315 yemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~e  393 (667)
                      |||++ |++||.            +.+..++...+.   ..      ...+.+..+++++++||.+||..||++|||+.+
T Consensus       191 ~el~t~~~~p~~------------~~~~~~~~~~i~---~~------~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~  249 (262)
T d1byga_         191 WEIYSFGRVPYP------------RIPLKDVVPRVE---KG------YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ  249 (262)
T ss_dssp             HHHHTTSCCSCT------------TSCGGGHHHHHT---TT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHCCCCCCC------------CCCHHHHHHHHH---cC------CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHH
Confidence            99998 788874            223333333321   11      122345678899999999999999999999999


Q ss_pred             HHcC
Q 005958          394 ALRH  397 (667)
Q Consensus       394 lL~H  397 (667)
                      ++++
T Consensus       250 l~~~  253 (262)
T d1byga_         250 LREQ  253 (262)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874


No 51 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-46  Score=390.27  Aligned_cols=245  Identities=14%  Similarity=0.131  Sum_probs=195.9

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCcceE
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnIv~  160 (667)
                      ..++|++++.||+|+||    +||+|++..++. ....+||+|.++..   ...+.+.+|+++|++++      |||||+
T Consensus         7 k~~dy~~~~~lG~G~fG----~Vy~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~   75 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFG----TVYKGLWIPEGE-KVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCR   75 (317)
T ss_dssp             CTTTEEEEEEEEECSSE----EEEEEEECC-----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             CHHHCEEeeEEecCCCe----EEEEEEEcCCCC-EEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCEee
Confidence            34689999999999999    999999987211 11236899988652   23467899999999995      999999


Q ss_pred             EEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHH
Q 005958          161 VHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  240 (667)
Q Consensus       161 l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QI  240 (667)
                      +++++.     + +..+++|| ++.+|+|.+++....        ..+++                    ..+..|+.||
T Consensus        76 l~g~~~-----~-~~~~~v~e-~~~~~~l~~~~~~~~--------~~~~~--------------------~~~~~i~~qi  120 (317)
T d1xkka_          76 LLGICL-----T-STVQLITQ-LMPFGCLLDYVREHK--------DNIGS--------------------QYLLNWCVQI  120 (317)
T ss_dssp             EEEEEE-----S-SSEEEEEE-CCTTCBHHHHHHHTS--------SSCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEe-----c-CCeeEEEE-eccCCcccccccccc--------cCCCH--------------------HHHHHHHHHH
Confidence            999998     4 35678888 888889999987653        24554                    4567899999


Q ss_pred             HHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-----------CCCCCCcccccCCCCCCchhhHHH
Q 005958          241 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFDMRC  309 (667)
Q Consensus       241 l~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-----------~~~Y~APE~l~~~~~ys~ksDIWS  309 (667)
                      +.||+|||++||+||||||+|||++. ++++||+|||+|+.....           .+.|+|||++.+ ..|+.++||||
T Consensus       121 ~~gl~yLH~~~iiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDvwS  198 (317)
T d1xkka_         121 AKGMNYLEDRRLVHRDLAARNVLVKT-PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWS  198 (317)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHH-CCCCHHHHHHH
T ss_pred             HHHHHHHHHcCcccCcchhhcceeCC-CCCeEeeccccceecccccccccccccccCccccChHHHhc-CCCChhhhhhh
Confidence            99999999999999999999999998 899999999999865432           268999996654 46999999999


Q ss_pred             HHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCC
Q 005958          310 VGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  388 (667)
Q Consensus       310 LGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kR  388 (667)
                      |||++|||+| |.+||.            +.+..++...+....         ..+.++.+++++.+||.+||+.||++|
T Consensus       199 ~Gvil~el~t~g~~p~~------------~~~~~~~~~~i~~~~---------~~~~p~~~~~~~~~li~~cl~~dP~~R  257 (317)
T d1xkka_         199 YGVTVWELMTFGSKPYD------------GIPASEISSILEKGE---------RLPQPPICTIDVYMIMVKCWMIDADSR  257 (317)
T ss_dssp             HHHHHHHHHTTSCCTTT------------TSCGGGHHHHHHHTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHHHCCCCCCC------------CCCHHHHHHHHHcCC---------CCCCCcccCHHHHHHHHHhCCCChhhC
Confidence            9999999998 788885            333444444443221         123345678999999999999999999


Q ss_pred             CCHHHHHcC
Q 005958          389 ISCLDALRH  397 (667)
Q Consensus       389 pSa~elL~H  397 (667)
                      ||+.|+++|
T Consensus       258 Ps~~eil~~  266 (317)
T d1xkka_         258 PKFRELIIE  266 (317)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999987


No 52 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=6.5e-46  Score=388.42  Aligned_cols=272  Identities=14%  Similarity=0.139  Sum_probs=205.1

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch---hhHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      .++..++|++++.||+|+||    +||+|+++......+++.||||+++..   ...+++.+|+++|++++      |||
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~------h~n   77 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFG----RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------NPN   77 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSC----EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC------CTT
T ss_pred             ccCCHHHcEEeEEEeeCCCe----EEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC------CCC
Confidence            34556789999999999999    999999875444457789999999753   23456799999999995      999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      |+++++++.     ..+..++||| |+++|+|.+++...........  .....   .............++...+..|+
T Consensus        78 iv~~~~~~~-----~~~~~~~v~e-~~~~g~L~~~l~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~l~~~~~~~i~  146 (301)
T d1lufa_          78 IVKLLGVCA-----VGKPMCLLFE-YMAYGDLNEFLRSMSPHTVCSL--SHSDL---STRARVSSPGPPPLSCAEQLCIA  146 (301)
T ss_dssp             BCCEEEEEC-----SSSSCEEEEE-CCTTCBHHHHHHHTCC---------------------------CCCCHHHHHHHH
T ss_pred             cccceeeec-----cCCceEEEEE-ecCCCcHHHHHHhcCccccccc--ccccc---chhhhccccCCCCCCHHHHHHHH
Confidence            999999998     7789999999 9999999999987542111000  00000   00000112223346678899999


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-----------CCCCCCcccccCCCCCCchhh
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-----------~~~Y~APE~l~~~~~ys~ksD  306 (667)
                      .||+.||+|||++|||||||||+|||++. ++.+||+|||+|+.....           .+.|+|||.+. ...|+.++|
T Consensus       147 ~qi~~gl~ylH~~~ivHrDlKp~NILld~-~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~t~ksD  224 (301)
T d1lufa_         147 RQVAAGMAYLSERKFVHRDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESD  224 (301)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHH
T ss_pred             HHHHHHhhhcccCCeEeeEEcccceEECC-CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc-cCCCChhhh
Confidence            99999999999999999999999999998 899999999999754322           25799999554 556999999


Q ss_pred             HHHHHHHHHHHHhCC-CCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCc
Q 005958          307 MRCVGFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  385 (667)
Q Consensus       307 IWSLGviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP  385 (667)
                      ||||||++|||++|. +||.            +.+..++...+.   ...      ..+.+..+++++.+||.+||+.||
T Consensus       225 VwS~Gvvl~ell~~~~~p~~------------~~~~~e~~~~v~---~~~------~~~~p~~~~~~~~~li~~cl~~~P  283 (301)
T d1lufa_         225 VWAYGVVLWEIFSYGLQPYY------------GMAHEEVIYYVR---DGN------ILACPENCPLELYNLMRLCWSKLP  283 (301)
T ss_dssp             HHHHHHHHHHHHTTTCCTTT------------TSCHHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             hccchhhHHHHHccCCCCCC------------CCCHHHHHHHHH---cCC------CCCCCccchHHHHHHHHHHcCCCh
Confidence            999999999999985 6774            333333333322   111      123345788999999999999999


Q ss_pred             CCCCCHHHHHc
Q 005958          386 SKRISCLDALR  396 (667)
Q Consensus       386 ~kRpSa~elL~  396 (667)
                      ++|||+.|+++
T Consensus       284 ~~RPt~~ev~~  294 (301)
T d1lufa_         284 ADRPSFCSIHR  294 (301)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999965


No 53 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4e-45  Score=384.28  Aligned_cols=270  Identities=15%  Similarity=0.117  Sum_probs=207.4

Q ss_pred             cccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCC
Q 005958           79 HVIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYH  155 (667)
Q Consensus        79 ~~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~H  155 (667)
                      ..+++..++|+++++||+|+||    .||+|++.......+++.||||+++...   ....+.+|+.+++++.     +|
T Consensus        16 ~~~~~~~~~~~l~~~iG~G~fg----~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-----~H   86 (311)
T d1t46a_          16 HKWEFPRNRLSFGKTLGAGAFG----KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NH   86 (311)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSE----EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CC
T ss_pred             ccccCCHHHeEEeeEEeecCCe----EEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc-----CC
Confidence            3455667999999999999999    9999998654444578999999997532   3345789999999996     69


Q ss_pred             CcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHH
Q 005958          156 SYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRL  235 (667)
Q Consensus       156 pnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~  235 (667)
                      ||||++++++.     +.+.+||||| ||++|+|.+++............           ...........+++..+..
T Consensus        87 pnIv~~~g~~~-----~~~~~~lvmE-~~~~g~l~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~  149 (311)
T d1t46a_          87 MNIVNLLGACT-----IGGPTLVITE-YCCYGDLLNFLRRKRDSFICSKT-----------SPAIMEDDELALDLEDLLS  149 (311)
T ss_dssp             TTBCCEEEEEC-----SSSSCEEEEE-CCTTEEHHHHHHHTTTTC-------------------------CCCCHHHHHH
T ss_pred             CCEEEEEEEEe-----eCCEEEEEEE-cCCCCCHHHHHHhcccccccccc-----------ccccccccccCCCHHHHHH
Confidence            99999999998     7788999999 99999999999875421110000           0000111223455678899


Q ss_pred             HHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC-----------CCCCCcccccCCCCCCch
Q 005958          236 LMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-----------PNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       236 i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~-----------~~Y~APE~l~~~~~ys~k  304 (667)
                      |+.||+.||+|||++||+||||||+|||++. ++.+||+|||.++......           +.|+|||++. ...|+.+
T Consensus       150 ~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~-~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~  227 (311)
T d1t46a_         150 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFE  227 (311)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHH
T ss_pred             HHHHHHHHHHHHHhCCeeecccccccccccc-cCcccccccchheeccCCCcceEeeecccChHHcCHHHhc-CCCCCCc
Confidence            9999999999999999999999999999998 8999999999998765432           5799999654 5569999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhc
Q 005958          305 FDMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLAT  383 (667)
Q Consensus       305 sDIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~  383 (667)
                      +|||||||++|||++ |.+||..           ......+.+.+.....         .......++++.+||.+||++
T Consensus       228 ~DIwS~G~~l~ellt~g~p~~~~-----------~~~~~~~~~~i~~~~~---------~~~~~~~~~~l~~Li~~cl~~  287 (311)
T d1t46a_         228 SDVWSYGIFLWELFSLGSSPYPG-----------MPVDSKFYKMIKEGFR---------MLSPEHAPAEMYDIMKTCWDA  287 (311)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTT-----------CCSSHHHHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCS
T ss_pred             ccccchHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHhcCCC---------CCCcccccHHHHHHHHHHcCC
Confidence            999999999999998 6666632           1122333343332221         122345789999999999999


Q ss_pred             CcCCCCCHHHHHc
Q 005958          384 KPSKRISCLDALR  396 (667)
Q Consensus       384 DP~kRpSa~elL~  396 (667)
                      ||++|||++|+++
T Consensus       288 dP~~RPs~~~il~  300 (311)
T d1t46a_         288 DPLKRPTFKQIVQ  300 (311)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHHH
Confidence            9999999999986


No 54 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-45  Score=383.14  Aligned_cols=265  Identities=17%  Similarity=0.149  Sum_probs=199.9

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCC--CCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCC
Q 005958           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNS--PLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYH  155 (667)
Q Consensus        81 ~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~--~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~H  155 (667)
                      +.+..++|++++.||+|+||    .||+|++.....  ..++..||||+++...   ...++.+|+..+.++.     +|
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg----~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-----~H   78 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFG----QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KH   78 (299)
T ss_dssp             TBCCGGGEEEEEECC---------CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-----CC
T ss_pred             CcccHHHeEEeeEEeecCCc----EEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc-----CC
Confidence            55667999999999999999    999999876321  1234689999997633   3356688999999995     59


Q ss_pred             CcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHH
Q 005958          156 SYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRL  235 (667)
Q Consensus       156 pnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~  235 (667)
                      ||||++++++.     +.+.+++||| ||++|+|.++|..+........             ..........++...+..
T Consensus        79 pnIv~~~~~~~-----~~~~~~~v~e-~~~~g~l~~~i~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~  139 (299)
T d1fgka_          79 KNIINLLGACT-----QDGPLYVIVE-YASKGNLREYLQARRPPGLEYS-------------YNPSHNPEEQLSSKDLVS  139 (299)
T ss_dssp             TTBCCEEEEEC-----SSSSCEEEEC-CCTTCBHHHHHHTTSCC-------------------------CCCCCHHHHHH
T ss_pred             CeEEecccccc-----cCCeEEEEEE-ccCCCcHHHHHHhhcCCccccc-------------cccccCccccCCHHHHHH
Confidence            99999999998     7788999999 9999999999987642111000             000112223455677899


Q ss_pred             HHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC-----------CCCCCcccccCCCCCCch
Q 005958          236 LMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-----------PNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       236 i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~-----------~~Y~APE~l~~~~~ys~k  304 (667)
                      ++.||+.||+|||++|||||||||+|||++. ++.+||+|||+++......           +.|+|||.+. ...|+.+
T Consensus       140 ~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~-~~~y~~k  217 (299)
T d1fgka_         140 CAYQVARGMEYLASKKCIHRDLAARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQ  217 (299)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH-HCCCCHH
T ss_pred             HHHHHHHHHHHhhhCCEEeeeecccceeecC-CCCeEeccchhhccccccccccccccCCCChhhhhhhHhc-CCCCCch
Confidence            9999999999999999999999999999998 8999999999998664332           5799999654 4579999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhc
Q 005958          305 FDMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLAT  383 (667)
Q Consensus       305 sDIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~  383 (667)
                      +|||||||++|||++ |.+||.            +.+...+.+.+..   ..      ..+.+..+++++++||.+||++
T Consensus       218 ~DiwS~Gvvl~ell~~g~~p~~------------~~~~~~~~~~i~~---~~------~~~~p~~~~~~l~~li~~cl~~  276 (299)
T d1fgka_         218 SDVWSFGVLLWEIFTLGGSPYP------------GVPVEELFKLLKE---GH------RMDKPSNCTNELYMMMRDCWHA  276 (299)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSST------------TCCHHHHHHHHHT---TC------CCCCCSSCCHHHHHHHHHHTCS
T ss_pred             hhhHHhHHHHHHhccCCCCCCC------------CCCHHHHHHHHHc---CC------CCCCCccchHHHHHHHHHHccC
Confidence            999999999999998 788885            3333333333321   11      1234457889999999999999


Q ss_pred             CcCCCCCHHHHHc
Q 005958          384 KPSKRISCLDALR  396 (667)
Q Consensus       384 DP~kRpSa~elL~  396 (667)
                      ||++|||+.|+++
T Consensus       277 dP~~Rps~~eil~  289 (299)
T d1fgka_         277 VPSQRPTFKQLVE  289 (299)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999986


No 55 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-45  Score=387.29  Aligned_cols=262  Identities=18%  Similarity=0.154  Sum_probs=202.2

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCc--EEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCC
Q 005958           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNT--KVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMY  154 (667)
Q Consensus        80 ~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~--~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~  154 (667)
                      .+.+..++|++.++||+|+||    +||+|+++.     ++.  .||||.++...   ..+.+.+|+++|+++.     +
T Consensus         4 ~~~i~~~~~~~~~~iG~G~fg----~Vy~~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~   69 (309)
T d1fvra_           4 YPVLDWNDIKFQDVIGEGNFG----QVLKARIKK-----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----H   69 (309)
T ss_dssp             SSBCCGGGCEEEEEEECGGGC----EEEEEEEEE-----TTEEEEEEEEEEECC------CHHHHHHHHHTTCC-----C
T ss_pred             CCccCHHHcEEEEEEeeCCCc----EEEEEEECC-----CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc-----C
Confidence            345677999999999999999    999999987     555  57788876422   3345789999999985     5


Q ss_pred             CCcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHH
Q 005958          155 HSYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIR  234 (667)
Q Consensus       155 HpnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~  234 (667)
                      |||||++++++.     +++.+||||| |+++|+|.++|........       .....      ........+++..+.
T Consensus        70 HpnIv~~~~~~~-----~~~~~~iV~e-y~~~g~L~~~l~~~~~~~~-------~~~~~------~~~~~~~~l~~~~~~  130 (309)
T d1fvra_          70 HPNIINLLGACE-----HRGYLYLAIE-YAPHGNLLDFLRKSRVLET-------DPAFA------IANSTASTLSSQQLL  130 (309)
T ss_dssp             CTTBCCEEEEEE-----ETTEEEEEEC-CCTTCBHHHHHHTTCHHHH-------CHHHH------HHTTBSCSSCHHHHH
T ss_pred             CCCEeeEEEEEe-----cCCeeEEEEE-ecCCCcHHHHHhhcccccc-------chhhh------ccccccCCCCHHHHH
Confidence            999999999999     7789999999 9999999999986531100       00000      001112234557789


Q ss_pred             HHHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccC--------CCCCCCCcccccCCCCCCchhh
Q 005958          235 LLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE--------DGPNNSSPDSNMDRRQMMIAFD  306 (667)
Q Consensus       235 ~i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~--------~~~~Y~APE~l~~~~~ys~ksD  306 (667)
                      .++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|+....        +...|+|||.+. ...|+.++|
T Consensus       131 ~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~-~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sD  208 (309)
T d1fvra_         131 HFAADVARGMDYLSQKQFIHRDLAARNILVGE-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSD  208 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECG-GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHH-HCEECHHHH
T ss_pred             HHHHHHHHHHHhhhcCCccccccccceEEEcC-CCceEEccccccccccccccccceecCCcccchHHhc-cCCCCccce
Confidence            99999999999999999999999999999998 89999999999975432        236899999654 456999999


Q ss_pred             HHHHHHHHHHHHhCC-CCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCc
Q 005958          307 MRCVGFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  385 (667)
Q Consensus       307 IWSLGviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP  385 (667)
                      ||||||++|||++|. +||.            +.+...+...   +....      ..+.+..+++++++||.+||+.||
T Consensus       209 vwSfGvil~ell~~~~~p~~------------~~~~~~~~~~---i~~~~------~~~~~~~~~~~~~~li~~cl~~dP  267 (309)
T d1fvra_         209 VWSYGVLLWEIVSLGGTPYC------------GMTCAELYEK---LPQGY------RLEKPLNCDDEVYDLMRQCWREKP  267 (309)
T ss_dssp             HHHHHHHHHHHHTTSCCTTT------------TCCHHHHHHH---GGGTC------CCCCCTTBCHHHHHHHHHHTCSSG
T ss_pred             eehhHHHHHHHHhcCCCCCC------------CCCHHHHHHH---HHhcC------CCCCCccCCHHHHHHHHHHcCCCh
Confidence            999999999999975 5663            3333333222   22211      123445688999999999999999


Q ss_pred             CCCCCHHHHHcC
Q 005958          386 SKRISCLDALRH  397 (667)
Q Consensus       386 ~kRpSa~elL~H  397 (667)
                      ++|||++|+++|
T Consensus       268 ~~RPs~~eil~~  279 (309)
T d1fvra_         268 YERPSFAQILVS  279 (309)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999986


No 56 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-45  Score=377.12  Aligned_cols=245  Identities=17%  Similarity=0.163  Sum_probs=188.7

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcch-----hhHHHHHHHHHHHHHHhhccCCCCCc
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-----QAQRRGRRAIEVLKKLVRRRLMYHSY  157 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~-----~~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (667)
                      +..++|++.+.||+|+||    +||+|++....  .....||||++++.     ...+.+.+|+.+|++++      |||
T Consensus         5 i~~~d~~~~~~iG~G~fg----~Vy~~~~~~~~--~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~------H~n   72 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFG----VVRRGEWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD------HRN   72 (273)
T ss_dssp             CCGGGEEEEEECC----C----CCEEEEEECTT--SCEEEEEEEC--------CHHHHHHHHHHHHHHHCC------CTT
T ss_pred             EchHHeEEEEEEecCCCe----EEEEEEEECCC--CcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC------CCC
Confidence            345789999999999999    99999976521  13357999998752     22356789999999995      999


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  237 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~  237 (667)
                      ||++++++.     + ..+++||| ||++|+|.+++..+.        ..+++                    ..+..++
T Consensus        73 Iv~~~g~~~-----~-~~~~lv~e-~~~~~~l~~~~~~~~--------~~l~~--------------------~~~~~~~  117 (273)
T d1u46a_          73 LIRLYGVVL-----T-PPMKMVTE-LAPLGSLLDRLRKHQ--------GHFLL--------------------GTLSRYA  117 (273)
T ss_dssp             BCCEEEEEC-----S-SSCEEEEE-CCTTCBHHHHHHHHG--------GGSCH--------------------HHHHHHH
T ss_pred             EEEEEEEEe-----e-cchheeee-eecCcchhhhhhccc--------CCCCH--------------------HHHHHHH
Confidence            999999997     3 35789999 999999999887642        13554                    4577899


Q ss_pred             HHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCC------------CCCCCcccccCCCCCCchh
Q 005958          238 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------------PNNSSPDSNMDRRQMMIAF  305 (667)
Q Consensus       238 ~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~------------~~Y~APE~l~~~~~ys~ks  305 (667)
                      .||+.||.|||++||+||||||+|||++. ++.+||+|||+++......            ..|+|||++. ...|+.++
T Consensus       118 ~qi~~gl~ylH~~~iiHrDikp~NIll~~-~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~  195 (273)
T d1u46a_         118 VQVAEGMGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TRTFSHAS  195 (273)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH-HCEEEHHH
T ss_pred             HHHHHHHHHhhhCCEeeeeecHHHhcccc-ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHh-CCCCCcch
Confidence            99999999999999999999999999999 8999999999998764432            4689999655 45699999


Q ss_pred             hHHHHHHHHHHHHh-CCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          306 DMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       306 DIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      |||||||++|||++ |++||.            +.+.....   ..+....     ...+....+++++++||.+||+.|
T Consensus       196 Di~S~Gvil~emlt~G~~Pf~------------~~~~~~~~---~~i~~~~-----~~~~~~~~~~~~l~~li~~cl~~d  255 (273)
T d1u46a_         196 DTWMFGVTLWEMFTYGQEPWI------------GLNGSQIL---HKIDKEG-----ERLPRPEDCPQDIYNVMVQCWAHK  255 (273)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTT------------TCCHHHHH---HHHHTSC-----CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             hhhhhHHHHHHHHhCCCCCCC------------CcCHHHHH---HHHHhCC-----CCCCCcccccHHHHHHHHHHcCCC
Confidence            99999999999998 899985            22222222   2222211     122345678899999999999999


Q ss_pred             cCCCCCHHHHHc
Q 005958          385 PSKRISCLDALR  396 (667)
Q Consensus       385 P~kRpSa~elL~  396 (667)
                      |++|||++|+++
T Consensus       256 p~~RPt~~ei~~  267 (273)
T d1u46a_         256 PEDRPTFVALRD  267 (273)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999864


No 57 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-44  Score=379.91  Aligned_cols=265  Identities=17%  Similarity=0.200  Sum_probs=206.1

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---hHHHHHHHHHHHHHHhhccCCCCC
Q 005958           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHS  156 (667)
Q Consensus        80 ~~~~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~Hp  156 (667)
                      .+++..++|+++++||+|+||    +||+|.++......+++.||||+++...   ....+.+|+++++++      +||
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l------~h~   83 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFG----MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCH   83 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSS----EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC------CCT
T ss_pred             ceeecHHHeEEeeEEeeCCCe----EEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc------CCC
Confidence            356777999999999999999    9999998743333356899999997532   223468999999999      599


Q ss_pred             cceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHH
Q 005958          157 YSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  236 (667)
Q Consensus       157 nIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i  236 (667)
                      |||++++++.     ..+..++||| |+++|+|.+++........  .                 ......++...+..+
T Consensus        84 nIv~~~~~~~-----~~~~~~lv~e-~~~~g~l~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~~~i  138 (308)
T d1p4oa_          84 HVVRLLGVVS-----QGQPTLVIME-LMTRGDLKSYLRSLRPAMA--N-----------------NPVLAPPSLSKMIQM  138 (308)
T ss_dssp             TBCCEEEEEC-----SSSSCEEEEE-CCTTCBHHHHHHHHHHHHH--H-----------------CTTCCCCCHHHHHHH
T ss_pred             CEeeeeeEEe-----cCCceeEEEe-ecCCCCHHHHHHhcccccc--c-----------------ccccCCCCHHHHHHH
Confidence            9999999998     7788999999 9999999999976421000  0                 001112234567889


Q ss_pred             HHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-----------CCCCCCcccccCCCCCCchh
Q 005958          237 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAF  305 (667)
Q Consensus       237 ~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-----------~~~Y~APE~l~~~~~ys~ks  305 (667)
                      +.|++.||.|||+++|+||||||+|||++. ++++||+|||+|+.....           .+.|+|||.+. ...|+.++
T Consensus       139 ~~~ia~gl~~LH~~~ivHrDlk~~NiLld~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~-~~~~~~~~  216 (308)
T d1p4oa_         139 AGEIADGMAYLNANKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYS  216 (308)
T ss_dssp             HHHHHHHHHHHHHTTCBCSCCSGGGEEECT-TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHH
T ss_pred             HHHHHHHHHHHhhCCeeeceEcCCceeecC-CceEEEeecccceeccCCcceeeccceecccccCCHHHHc-cCCCCccc
Confidence            999999999999999999999999999998 899999999999855432           27799999654 55689999


Q ss_pred             hHHHHHHHHHHHHhC-CCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          306 DMRCVGFMMAKMVLR-ELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       306 DIWSLGviLyemltG-~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      |||||||++|||++| .+||.            +.+..+....+.   ...      ..+.++.+++++.+||.+||+.|
T Consensus       217 Dv~S~G~il~El~t~~~~p~~------------~~~~~~~~~~i~---~~~------~~~~p~~~~~~l~~li~~cl~~~  275 (308)
T d1p4oa_         217 DVWSFGVVLWEIATLAEQPYQ------------GLSNEQVLRFVM---EGG------LLDKPDNCPDMLFELMRMCWQYN  275 (308)
T ss_dssp             HHHHHHHHHHHHHHTSCCTTT------------TSCHHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccccHHHHHHHHHhCCCCCCC------------CCCHHHHHHHHH---hCC------CCCCcccchHHHHHHHHHHcCCC
Confidence            999999999999998 47764            333333333322   111      12344578899999999999999


Q ss_pred             cCCCCCHHHHHc------CCCCCC
Q 005958          385 PSKRISCLDALR------HPFLCG  402 (667)
Q Consensus       385 P~kRpSa~elL~------HPwf~~  402 (667)
                      |++|||+.|+++      +|+|++
T Consensus       276 P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         276 PKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             GGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             hhHCcCHHHHHHHHHHhcCCCCcC
Confidence            999999999997      566543


No 58 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=6.7e-43  Score=364.52  Aligned_cols=251  Identities=10%  Similarity=0.083  Sum_probs=191.7

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYV  165 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~~  165 (667)
                      ++|++++.||+|+||    +||+|++..     +++.||||++........+.+|+++++.++     .|++|+.+.+++
T Consensus         7 ~rY~l~~~iG~G~fG----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~-----~~~~i~~~~~~~   72 (299)
T d1ckia_           7 NRYRLGRKIGSGSFG----DIYLGTDIA-----AGEEVAIKLECVKTKHPQLHIESKIYKMMQ-----GGVGIPTIRWCG   72 (299)
T ss_dssp             TTEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEESCTTSCCHHHHHHHHHHST-----TSTTCCCEEEEE
T ss_pred             CEEEEeEEEeeCCCc----EEEEEEECC-----CCCEEEEEEEchhccCHHHHHHHHHHHHcc-----CCCcccEEEEEE
Confidence            579999999999999    999999987     799999999887655567889999999996     355566666666


Q ss_pred             EecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 005958          166 SSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVN  245 (667)
Q Consensus       166 ~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~aL~  245 (667)
                      .     +.+..++||| |+++ +|.+.+....        ..+++                    ..+..++.|++.||+
T Consensus        73 ~-----~~~~~~ivme-~~~~-~l~~~~~~~~--------~~~~~--------------------~~~~~~~~qi~~~l~  117 (299)
T d1ckia_          73 A-----EGDYNVMVME-LLGP-SLEDLFNFCS--------RKFSL--------------------KTVLLLADQMISRIE  117 (299)
T ss_dssp             E-----ETTEEEEEEE-CCCC-BHHHHHHHTT--------TCCCH--------------------HHHHHHHHHHHHHHH
T ss_pred             e-----cCCEEEEEEE-EcCC-chhhhhhhcc--------CCCcH--------------------HHHHHHHHHHHHHHH
Confidence            6     6788999999 9977 8877776533        14554                    457889999999999


Q ss_pred             HHHHCCCcccCCCCCcEEEcC--CCCeEEEeeecccccccC----------------CCCCCCCcccccCCCCCCchhhH
Q 005958          246 YLHSHGLAHTELRLENVHISP--VDRHIKVGILGNAADFYE----------------DGPNNSSPDSNMDRRQMMIAFDM  307 (667)
Q Consensus       246 yLHs~gIvHrDLKPeNILl~~--~~~~vKL~DFGlA~~~~~----------------~~~~Y~APE~l~~~~~ys~ksDI  307 (667)
                      |||++||+||||||+|||++.  .+..+||+|||+|+.+..                +.+.|+|||++. +..|+.++||
T Consensus       118 ~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di  196 (299)
T d1ckia_         118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDL  196 (299)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT-TBCCCHHHHH
T ss_pred             HHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHh-CCCCCChhhE
Confidence            999999999999999999864  245799999999986542                237899999654 5569999999


Q ss_pred             HHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCC
Q 005958          308 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  387 (667)
Q Consensus       308 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~k  387 (667)
                      |||||++|||++|++||.......        ................      .....+.+++++.+||.+||+.||++
T Consensus       197 wSlG~~l~el~tg~~P~~~~~~~~--------~~~~~~~~~~~~~~~~------~~~~~~~~p~~~~~li~~cl~~~p~~  262 (299)
T d1ckia_         197 ESLGYVLMYFNLGSLPWQGLKAAT--------KRQKYERISEKKMSTP------IEVLCKGYPSEFATYLNFCRSLRFDD  262 (299)
T ss_dssp             HHHHHHHHHHHHSSCTTCCCC---------------HHHHHHHHHHSC------HHHHTTTSCHHHHHHHHHHHHSCTTC
T ss_pred             EecCHHHHHHHhCCCcccccchHH--------HHHHHHHhhcccCCCC------hhHhccCCCHHHHHHHHHHccCChhH
Confidence            999999999999999996321100        0001111111111110      01123467889999999999999999


Q ss_pred             CCCHHH---HHcCCCC
Q 005958          388 RISCLD---ALRHPFL  400 (667)
Q Consensus       388 RpSa~e---lL~HPwf  400 (667)
                      ||++++   +|+|+|.
T Consensus       263 RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         263 KPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             CCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHH
Confidence            999875   4666654


No 59 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-43  Score=368.00  Aligned_cols=242  Identities=14%  Similarity=0.159  Sum_probs=187.5

Q ss_pred             EEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcc---hhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEEE
Q 005958           89 KILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLIS---VQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYV  165 (667)
Q Consensus        89 ~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~---~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~~  165 (667)
                      .+.++||+|+||    +||+|++....  .+...||||+++.   ....+++.+|+++|++++      |||||++++++
T Consensus        30 ~~~~~iG~G~fg----~Vyk~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~g~~   97 (311)
T d1r0pa_          30 HFNEVIGRGHFG----CVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS------HPNVLSLLGIC   97 (311)
T ss_dssp             EEEEEEEEETTE----EEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC------CTTBCCCCEEE
T ss_pred             ccceEEeecCCe----EEEEEEEECCC--CEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCEeEEeEEE
Confidence            346889999999    99999987621  1234699999874   223356799999999995      99999999997


Q ss_pred             EecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 005958          166 SSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVN  245 (667)
Q Consensus       166 ~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~aL~  245 (667)
                      ..    .++.+++||| ||++|+|.+++.....        .++                    ...+..++.|++.||.
T Consensus        98 ~~----~~~~~~lv~E-~~~~g~l~~~~~~~~~--------~~~--------------------~~~~~~i~~qia~gL~  144 (311)
T d1r0pa_          98 LR----SEGSPLVVLP-YMKHGDLRNFIRNETH--------NPT--------------------VKDLIGFGLQVAKGMK  144 (311)
T ss_dssp             EE----TTTEEEEEEE-CCTTCBHHHHHHCTTC--------CCB--------------------HHHHHHHHHHHHHHHH
T ss_pred             Ee----cCCceEEEEE-EeecCchhhhhccccc--------cch--------------------HHHHHHHHHHHHHhhh
Confidence            62    4568999999 9999999999886431        222                    2456789999999999


Q ss_pred             HHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-------------CCCCCCcccccCCCCCCchhhHHHHHH
Q 005958          246 YLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------------GPNNSSPDSNMDRRQMMIAFDMRCVGF  312 (667)
Q Consensus       246 yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-------------~~~Y~APE~l~~~~~ys~ksDIWSLGv  312 (667)
                      |||+.||+||||||+|||++. ++.+||+|||+++.....             .+.|+|||.+. ...|+.++|||||||
T Consensus       145 ~lH~~~iiHrDLK~~NILl~~-~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI~SfGi  222 (311)
T d1r0pa_         145 FLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGV  222 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEECT-TCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHH-HCCCCHHHHHHHHHH
T ss_pred             hhcccCcccCCccHHhEeECC-CCCEEEecccchhhccccccccceecccccccccccChHHHh-cCCCCChhHhhhhHH
Confidence            999999999999999999998 899999999999865432             25699999554 456999999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcCcCCCCCHH
Q 005958          313 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  392 (667)
Q Consensus       313 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~  392 (667)
                      ++|||++|..||...           .....+...+   ....      ....++.+++++.+||.+||+.||++|||+.
T Consensus       223 vl~El~t~~~p~~~~-----------~~~~~~~~~i---~~g~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~  282 (311)
T d1r0pa_         223 LLWELMTRGAPPYPD-----------VNTFDITVYL---LQGR------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS  282 (311)
T ss_dssp             HHHHHHTTSCCSCC-----------------CHHHH---HTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHCCCCCCCC-----------CCHHHHHHHH---HcCC------CCCCcccCcHHHHHHHHHHcCCCHhHCcCHH
Confidence            999999977776421           1111111221   1111      1123456789999999999999999999999


Q ss_pred             HHHcC
Q 005958          393 DALRH  397 (667)
Q Consensus       393 elL~H  397 (667)
                      |+++|
T Consensus       283 ei~~~  287 (311)
T d1r0pa_         283 ELVSR  287 (311)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987


No 60 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.8e-43  Score=374.99  Aligned_cols=280  Identities=18%  Similarity=0.206  Sum_probs=200.9

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccC-----CCCCc
Q 005958           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRL-----MYHSY  157 (667)
Q Consensus        84 ~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~-----~~Hpn  157 (667)
                      .-++|+++++||+|+||    +||+|+++.     +|+.||||++++.. ..+...+|+.+++.+.+...     +.|+|
T Consensus        11 ~~~rY~i~~~LG~G~fg----~Vy~~~~~~-----~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_          11 KDARYILVRKLGWGHFS----TVWLAKDMV-----NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             TTTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             cCCcEEEEEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            33579999999999999    999999998     89999999998643 33566899999999864332     24799


Q ss_pred             ceEEEEEEEecccCCCCeEEEEEccCCCCC-CHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHH
Q 005958          158 SMQVHGYVSSHTTSGRSLFTLVHGQYHGSF-SLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  236 (667)
Q Consensus       158 Iv~l~~~~~~~~~~~~~~~~lVmE~~~~~G-sL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i  236 (667)
                      |+++++++...   .....+++|+ ++..+ +.........       ...+++                    ..++.+
T Consensus        82 iv~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~--------------------~~i~~i  130 (362)
T d1q8ya_          82 ILKLLDHFNHK---GPNGVHVVMV-FEVLGENLLALIKKYE-------HRGIPL--------------------IYVKQI  130 (362)
T ss_dssp             BCCCCEEEEEE---ETTEEEEEEE-ECCCCEEHHHHHHHTT-------TSCCCH--------------------HHHHHH
T ss_pred             eEEEEEEeeec---cccceeeeee-eccccccccccccccc-------ccCCcH--------------------HHHHHH
Confidence            99999998744   4456666776 44433 4444333321       113343                    568899


Q ss_pred             HHHHHHHHHHHHH-CCCcccCCCCCcEEEcCCC-----CeEEEeeecccccccCCC------CCCCCcccccCCCCCCch
Q 005958          237 MRDLLIGVNYLHS-HGLAHTELRLENVHISPVD-----RHIKVGILGNAADFYEDG------PNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       237 ~~QIl~aL~yLHs-~gIvHrDLKPeNILl~~~~-----~~vKL~DFGlA~~~~~~~------~~Y~APE~l~~~~~ys~k  304 (667)
                      +.||+.||+|||+ +||+||||||+|||++..+     ..++|+|||.|.......      +.|+|||++.. ..|+.+
T Consensus       131 ~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~  209 (362)
T d1q8ya_         131 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCG  209 (362)
T ss_dssp             HHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTH
T ss_pred             HHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhhccc-cCCCcc
Confidence            9999999999998 8999999999999998622     159999999998655432      67999996664 568999


Q ss_pred             hhHHHHHHHHHHHHhCCCCChhh---------hhhhhhhhccCCChhHHHHHHH---HHhccC------CCCCC------
Q 005958          305 FDMRCVGFMMAKMVLRELMDPLI---------FTKFKSFLTKGIDPSCLREFLL---QVLNRN------SSSGN------  360 (667)
Q Consensus       305 sDIWSLGviLyemltG~~PF~~~---------~~~~~~~~~~g~~~~~l~~~~~---~~~~~~------~~~~~------  360 (667)
                      +||||+||++++|++|++||...         ......+...|..+........   ......      .....      
T Consensus       210 ~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (362)
T d1q8ya_         210 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDV  289 (362)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHH
T ss_pred             ccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhh
Confidence            99999999999999999999631         2233334445555443322110   000000      00000      


Q ss_pred             --CCcccccCCCHHHHHHHHHhhhcCcCCCCCHHHHHcCCCCCCCC
Q 005958          361 --TGFQILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  404 (667)
Q Consensus       361 --~~~~~~~~~s~e~~dLI~~~L~~DP~kRpSa~elL~HPwf~~~~  404 (667)
                        .........+++++|||.+||++||.+||||+|+|+||||++..
T Consensus       290 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         290 LTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence              01112234567899999999999999999999999999999754


No 61 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-43  Score=368.01  Aligned_cols=258  Identities=14%  Similarity=0.137  Sum_probs=184.8

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHH--HHHhhccCCCCCcceEEEE
Q 005958           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVL--KKLVRRRLMYHSYSMQVHG  163 (667)
Q Consensus        86 ~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL--~~L~~~~~~~HpnIv~l~~  163 (667)
                      .+|.+.+.||+|+||    +||+|++.       |+.||||+++.... +...+|.+++  ..+      +|||||++++
T Consensus         3 ~~~~l~~~iG~G~fg----~Vy~~~~~-------g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~------~HpnIv~~~~   64 (303)
T d1vjya_           3 RTIVLQESIGKGRFG----EVWRGKWR-------GEEVAVKIFSSREE-RSWFREAEIYQTVML------RHENILGFIA   64 (303)
T ss_dssp             GGEEEEEEEECCSSS----EEEEEEET-------TEEEEEEEECGGGH-HHHHHHHHHHTSTTC------CCTTBCCEEE
T ss_pred             cEEEEEEEEeeCCCe----EEEEEEEC-------CEEEEEEEECccch-hHHHHHHHHHHHhhC------CCCcCcceEE
Confidence            568999999999999    99999853       68999999976543 3344455444  445      5999999999


Q ss_pred             EEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHH
Q 005958          164 YVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  243 (667)
Q Consensus       164 ~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~a  243 (667)
                      ++.... .....+|+||| ||++|+|.++|++.          .+++                    ..+..++.|++.|
T Consensus        65 ~~~~~~-~~~~~~~lv~E-y~~~g~L~~~l~~~----------~l~~--------------------~~~~~~~~~ia~g  112 (303)
T d1vjya_          65 ADNKDN-GTWTQLWLVSD-YHEHGSLFDYLNRY----------TVTV--------------------EGMIKLALSTASG  112 (303)
T ss_dssp             EEEEEC-SSSEEEEEEEE-CCTTCBHHHHHHHC----------CBCH--------------------HHHHHHHHHHHHH
T ss_pred             EEEeCC-CcceEEEEEEe-cccCCCHHHHHhcC----------CCCH--------------------HHHHHHHHHHHHH
Confidence            997441 12347899999 99999999999874          2443                    4567899999999


Q ss_pred             HHHHHH--------CCCcccCCCCCcEEEcCCCCeEEEeeecccccccCC-------------CCCCCCcccccCCC---
Q 005958          244 VNYLHS--------HGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------------GPNNSSPDSNMDRR---  299 (667)
Q Consensus       244 L~yLHs--------~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~-------------~~~Y~APE~l~~~~---  299 (667)
                      |.|||+        +||+||||||+|||++. ++.+||+|||+++.....             ++.|+|||++.+..   
T Consensus       113 l~~lH~~~~~~~~~~~IvHrDlKp~NILl~~-~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  191 (303)
T d1vjya_         113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK  191 (303)
T ss_dssp             HHHHHCCBCSTTCBCEEECSCCCGGGEEECT-TSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTT
T ss_pred             HHHHHHhhhhhccCCCeeccccCccceEEcC-CCCeEEEecCccccccCCCcceeccccceecccCcCChhhcccccccc
Confidence            999996        59999999999999998 899999999999865332             37899999665432   


Q ss_pred             --CCCchhhHHHHHHHHHHHHhCCCCChhhhh---hhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHH
Q 005958          300 --QMMIAFDMRCVGFMMAKMVLRELMDPLIFT---KFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGW  374 (667)
Q Consensus       300 --~ys~ksDIWSLGviLyemltG~~PF~~~~~---~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~  374 (667)
                        .++.++|||||||++|||++|.+||.....   .+.................   ....................++.
T Consensus       192 ~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~l~  268 (303)
T d1vjya_         192 HFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV---CEQKLRPNIPNRWQSCEALRVMA  268 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH---TTSCCCCCCCGGGGGCHHHHHHH
T ss_pred             CCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH---hccccCCCCCcccCChHHHHHHH
Confidence              257799999999999999999988753111   1111111111122222221   11111000000001112234689


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHcC
Q 005958          375 NLLSLLLATKPSKRISCLDALRH  397 (667)
Q Consensus       375 dLI~~~L~~DP~kRpSa~elL~H  397 (667)
                      +|+.+||+.||++|||+.|++++
T Consensus       269 ~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         269 KIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcccCHhHCcCHHHHHHH
Confidence            99999999999999999999863


No 62 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1.4e-41  Score=354.02  Aligned_cols=248  Identities=13%  Similarity=0.057  Sum_probs=195.0

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGY  164 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~  164 (667)
                      -++|++++.||+|+||    +||+|++..     +++.||||++........+.+|+++++.|+     .|+||+.++++
T Consensus         4 g~~Y~i~~~iG~G~fG----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~   69 (293)
T d1csna_           4 GVHYKVGRRIGEGSFG----VIFEGTNLL-----NNQQVAIKFEPRRSDAPQLRDEYRTYKLLA-----GCTGIPNVYYF   69 (293)
T ss_dssp             TTTEEEEEEEEECSSC----EEEEEEETT-----TTEEEEEEEEECCTTSCCHHHHHHHHHHTT-----TCTTCCCEEEE
T ss_pred             CCceEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEEccccCcHHHHHHHHHHHHhc-----CCCCCCEEEEE
Confidence            4789999999999999    999999998     899999999877655566789999999997     57999999999


Q ss_pred             EEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 005958          165 VSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  244 (667)
Q Consensus       165 ~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~~~~~~i~~i~~QIl~aL  244 (667)
                      +.     .....++||| |+++ +|.+++...+        ..+++                    ..+..++.|++.||
T Consensus        70 ~~-----~~~~~~~vme-~~~~-~l~~~~~~~~--------~~~~~--------------------~~~~~i~~q~~~~l  114 (293)
T d1csna_          70 GQ-----EGLHNVLVID-LLGP-SLEDLLDLCG--------RKFSV--------------------KTVAMAAKQMLARV  114 (293)
T ss_dssp             EE-----ETTEEEEEEE-CCCC-BHHHHHHHTT--------TCCCH--------------------HHHHHHHHHHHHHH
T ss_pred             ee-----cCCccEEEEE-ecCC-CHHHHHHhhc--------cchhh--------------------HHHHHHHHHHHHHH
Confidence            98     7789999999 9865 9999998754        13443                    45678999999999


Q ss_pred             HHHHHCCCcccCCCCCcEEEcC----CCCeEEEeeecccccccC----------------CCCCCCCcccccCCCCCCch
Q 005958          245 NYLHSHGLAHTELRLENVHISP----VDRHIKVGILGNAADFYE----------------DGPNNSSPDSNMDRRQMMIA  304 (667)
Q Consensus       245 ~yLHs~gIvHrDLKPeNILl~~----~~~~vKL~DFGlA~~~~~----------------~~~~Y~APE~l~~~~~ys~k  304 (667)
                      +|||++||+||||||+|||++.    .++.+||+|||+|+.+..                +++.|||||++. ...|+.+
T Consensus       115 ~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~-~~~~~~~  193 (293)
T d1csna_         115 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL-GREQSRR  193 (293)
T ss_dssp             HHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHH
T ss_pred             HHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhc-CCCCChH
Confidence            9999999999999999999974    257899999999986532                237899999655 4569999


Q ss_pred             hhHHHHHHHHHHHHhCCCCChhhhhhhhhhhccCCChhHHHHHHHHHhccCCCCCCCCcccccCCCHHHHHHHHHhhhcC
Q 005958          305 FDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  384 (667)
Q Consensus       305 sDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~e~~dLI~~~L~~D  384 (667)
                      +|||||||++|||++|++||......        ................ +     ......++++++.+|+..|+..+
T Consensus       194 ~DiwSlG~~l~elltg~~Pf~~~~~~--------~~~~~~~~i~~~~~~~-~-----~~~l~~~~p~~l~~ii~~~~~~~  259 (293)
T d1csna_         194 DDLEALGHVFMYFLRGSLPWQGLKAA--------TNKQKYERIGEKKQST-P-----LRELCAGFPEEFYKYMHYARNLA  259 (293)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSSCCSC--------CHHHHHHHHHHHHHHS-C-----HHHHTTTSCHHHHHHHHHHHHCC
T ss_pred             HHHHHhhHHHHHHHhCCCcCCCccch--------hHHHHHHHHHhccCCC-C-----hHHhcCCCCHHHHHHHHHHhcCC
Confidence            99999999999999999999622110        0001111111111100 0     01123457789999999999999


Q ss_pred             cCCCCCHHHHHc
Q 005958          385 PSKRISCLDALR  396 (667)
Q Consensus       385 P~kRpSa~elL~  396 (667)
                      |++||+.+.+.+
T Consensus       260 ~~~rP~y~~l~~  271 (293)
T d1csna_         260 FDATPDYDYLQG  271 (293)
T ss_dssp             TTCCCCHHHHHH
T ss_pred             cccCcCHHHHHH
Confidence            999999876643


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.88  E-value=2e-23  Score=202.29  Aligned_cols=163  Identities=17%  Similarity=0.086  Sum_probs=119.0

Q ss_pred             eEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh--------------------hHHHHHHHHHHHHHH
Q 005958           88 FKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--------------------AQRRGRRAIEVLKKL  147 (667)
Q Consensus        88 y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~--------------------~~~~~~rEi~iL~~L  147 (667)
                      +.++++||+|+||    +||+|++.      +|+.||||+++...                    ......+|...+.++
T Consensus         2 ~~vg~~IG~G~~g----~Vy~a~~~------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l   71 (191)
T d1zara2           2 DAIGKLMGEGKES----AVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL   71 (191)
T ss_dssp             SEEEEEEEECSSE----EEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             chhCCEeeeCcce----EEEEEECC------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            5689999999999    99999986      58999999876311                    012235688888888


Q ss_pred             hhccCCCCCcceEEEEEEEecccCCCCeEEEEEccCCCCCCHHHHHHhcCCCcccccccCCCHHHHhhcCCCCCCCCCcc
Q 005958          148 VRRRLMYHSYSMQVHGYVSSHTTSGRSLFTLVHGQYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAAS  227 (667)
Q Consensus       148 ~~~~~~~HpnIv~l~~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~i~~~~~~~~l~~~~~l~E~~a~~~~~~~~~~~~~~  227 (667)
                      .      |++++..+++..         .+++|| |++++.+.+                +++                 
T Consensus        72 ~------~~~v~~~~~~~~---------~~lvme-~~~~~~~~~----------------l~~-----------------  102 (191)
T d1zara2          72 Q------GLAVPKVYAWEG---------NAVLME-LIDAKELYR----------------VRV-----------------  102 (191)
T ss_dssp             T------TSSSCCEEEEET---------TEEEEE-CCCCEEGGG----------------CCC-----------------
T ss_pred             c------CCCcceEEEecC---------CEEEEE-eeccccccc----------------hhh-----------------
Confidence            4      999998886542         279999 999844322                221                 


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccccccCCCC-CCCCcc--cc--cCCCCCC
Q 005958          228 RQLRLIRLLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDGP-NNSSPD--SN--MDRRQMM  302 (667)
Q Consensus       228 ~~~~~i~~i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~~~~~~~~-~Y~APE--~l--~~~~~ys  302 (667)
                         ..+..++.||+.||.|||++||+||||||+|||+++  +.++|+|||.|.....+.. .|....  .+  ...+.|+
T Consensus       103 ---~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~--~~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~  177 (191)
T d1zara2         103 ---ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE--EGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYR  177 (191)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET--TEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC--CCEEEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence               124669999999999999999999999999999995  5699999999987754431 111110  00  1134588


Q ss_pred             chhhHHHHHHHH
Q 005958          303 IAFDMRCVGFMM  314 (667)
Q Consensus       303 ~ksDIWSLGviL  314 (667)
                      .++|+||+.--+
T Consensus       178 ~~~d~~s~~~~~  189 (191)
T d1zara2         178 TEKDINSAIDRI  189 (191)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CcccHHHHHHHH
Confidence            899999986433


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.19  E-value=5e-06  Score=81.38  Aligned_cols=86  Identities=9%  Similarity=-0.007  Sum_probs=60.8

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh--hHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~--~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      +..|++.+..+-++.+    .||+...       .++.+++|+.....  ....+.+|..++..++     .+--+.+++
T Consensus        13 ~~~~~~~~~~~G~s~~----~v~rv~~-------~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~-----~~vpvP~vl   76 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPA----KVYKLVG-------ENENLYLKMTDSRYKGTTYDVEREKDMMLWLE-----GKLPVPKVL   76 (263)
T ss_dssp             HTTSEEEECSCCCSSS----EEEEEEC-------SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-----TTSCCCCEE
T ss_pred             hhceEEEEcCCCCCCC----cEEEEEe-------CCCeEEEEEcCCCcccchhhHHHHHHHHHHHh-----ccCCCCcEE
Confidence            4678877765545555    8998753       36778899876532  2234688999999996     344456777


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCHHHH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSLRHW  192 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL~~~  192 (667)
                      .+..     +.+..++||+ +.+|.++.+.
T Consensus        77 ~~~~-----~~~~~~lv~~-~l~G~~~~~~  100 (263)
T d1j7la_          77 HFER-----HDGWSNLLMS-EADGVLCSEE  100 (263)
T ss_dssp             EEEE-----ETTEEEEEEE-CCSSEEHHHH
T ss_pred             EEEe-----cCCceEEEEE-eccccccccc
Confidence            7776     5678899999 9998777554


No 65 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.59  E-value=0.00012  Score=76.49  Aligned_cols=78  Identities=13%  Similarity=0.113  Sum_probs=50.0

Q ss_pred             EeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchh---------hHHHHHHHHHHHHHHhhccCCCCCcceEE
Q 005958           91 LDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---------AQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (667)
Q Consensus        91 ~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~---------~~~~~~rEi~iL~~L~~~~~~~HpnIv~l  161 (667)
                      .+.||.|...    .||++.+..     .++.|+||.-...-         ..++..+|.++|+.+...   ....+.++
T Consensus        31 ~~eig~G~~N----~vfrV~~~~-----~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~---~p~~vP~v   98 (392)
T d2pula1          31 CQEIGDGNLN----YVFHIYDQE-----HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH---VPHLVPRV   98 (392)
T ss_dssp             EEECCSSSSE----EEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTT---CGGGSCCE
T ss_pred             EEEeCCCceE----eEEEEEeCC-----CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhh---CCCCcceE
Confidence            5678999999    999998775     57889999764310         123456799999988521   12345666


Q ss_pred             EEEEEecccCCCCeEEEEEccCCCCCC
Q 005958          162 HGYVSSHTTSGRSLFTLVHGQYHGSFS  188 (667)
Q Consensus       162 ~~~~~~~~~~~~~~~~lVmE~~~~~Gs  188 (667)
                      +.+.       ....++||| ++++..
T Consensus        99 ~~~d-------~~~~~lvmE-~L~~~~  117 (392)
T d2pula1          99 FYSD-------TEMAVTVME-DLSHLK  117 (392)
T ss_dssp             EEEE-------TTTTEEEEC-CCTTSE
T ss_pred             EEEc-------CCCCEEEEe-ccCCcc
Confidence            6543       234578999 887644


No 66 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.58  E-value=0.00015  Score=70.15  Aligned_cols=77  Identities=18%  Similarity=0.080  Sum_probs=52.8

Q ss_pred             EeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEEEEEEecccCC
Q 005958           93 RVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVSSHTTSG  172 (667)
Q Consensus        93 ~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~~~~~~~~~~~  172 (667)
                      .+..|..+   ..||+....      .+..+++|.-... ....+.+|...|+.|...    .-.+.+++.+..     +
T Consensus        17 ~~~~G~s~---~~v~r~~~~------~~~~~vlK~~~~~-~~~~l~~E~~~l~~L~~~----gvpvP~v~~~~~-----~   77 (255)
T d1nd4a_          17 QQTIGCSD---AAVFRLSAQ------GRPVLFVKTDLSG-ALNELQDEAARLSWLATT----GVPCAAVLDVVT-----E   77 (255)
T ss_dssp             ECSCTTSS---CEEEEEECT------TSCCEEEEEECSC-TTSCHHHHHHHHHHHHTT----TCCBCCEEEEEE-----C
T ss_pred             EcCCcccC---CeEEEEEeC------CCCEEEEEeCCcc-CHhHHHHHHHHHHHHHhc----CCCCCceeeecc-----c
Confidence            45555543   178988765      4677899986654 334578899999998631    122566777766     6


Q ss_pred             CCeEEEEEccCCCCCCH
Q 005958          173 RSLFTLVHGQYHGSFSL  189 (667)
Q Consensus       173 ~~~~~lVmE~~~~~GsL  189 (667)
                      .+..++||+ +++|.++
T Consensus        78 ~~~~~~v~~-~i~G~~~   93 (255)
T d1nd4a_          78 AGRDWLLLG-EVPGQDL   93 (255)
T ss_dssp             SSCEEEEEE-CCSSEET
T ss_pred             ccceEEEEE-eeecccc
Confidence            678899999 9987554


No 67 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.61  E-value=0.0052  Score=63.44  Aligned_cols=85  Identities=20%  Similarity=0.286  Sum_probs=55.7

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCC--CCCcEEEEEEEcchhhHHHHHHHHHHHHHHhhccCCCCCcceEEE
Q 005958           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSP--LHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (667)
Q Consensus        85 ~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~--~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~  162 (667)
                      .+++++ +.|+.|-.-    .+|++........  ...+.|.+++.-.....-...+|..+++.+.     .+.-..+++
T Consensus        42 ~~~l~v-~~l~GGltN----~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls-----~~gl~Pkll  111 (395)
T d1nw1a_          42 LEHLRI-SRIKGGMSN----MLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS-----ERHLGPKLY  111 (395)
T ss_dssp             GGGEEE-EEECCCTTE----EEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHH-----HTTSSSCEE
T ss_pred             ccceEE-EEcCCcccc----ceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHH-----hCCCCCeEE
Confidence            345555 577777777    9999987642111  1346788887653323334578999999997     354455788


Q ss_pred             EEEEecccCCCCeEEEEEccCCCCCCH
Q 005958          163 GYVSSHTTSGRSLFTLVHGQYHGSFSL  189 (667)
Q Consensus       163 ~~~~~~~~~~~~~~~lVmE~~~~~GsL  189 (667)
                      +++.     +    .+||| |++|..|
T Consensus       112 ~~~~-----~----g~I~e-fi~g~~l  128 (395)
T d1nw1a_         112 GIFS-----G----GRLEE-YIPSRPL  128 (395)
T ss_dssp             EEET-----T----EEEEC-CCCEEEC
T ss_pred             EEcC-----C----ceEEE-EeccccC
Confidence            8764     2    58899 8887433


No 68 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.35  E-value=0.0048  Score=61.97  Aligned_cols=69  Identities=9%  Similarity=0.092  Sum_probs=45.3

Q ss_pred             eEEEEEEcCCCCCCCCcEEEEEEEcchh-hHHHHHHHHHHHHHHhhccCCCCCcceEEE--EEEEecccCCCCeEEEEEc
Q 005958          105 VVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH--GYVSSHTTSGRSLFTLVHG  181 (667)
Q Consensus       105 ~Vy~a~~~~~~~~~tg~~vAvK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnIv~l~--~~~~~~~~~~~~~~~lVmE  181 (667)
                      .||+++..      +|..|++|+.+... ..+++..|...+..|.... +..+..+..-  ..+.     ..+..+.+++
T Consensus        37 ~vy~v~~~------dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~g-ipv~~p~~~~g~~~~~-----~~~~~~~l~~  104 (325)
T d1zyla1          37 RVYQFQDE------DRRRFVVKFYRPERWTADQILEEHQFALQLVNDE-VPVAAPVAFNGQTLLN-----HQGFYFAVFP  104 (325)
T ss_dssp             EEEEECCT------TCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTT-CSBCCCCCBTTBSCEE-----ETTEEEEEEE
T ss_pred             eeEEEEcC------CCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcC-CCCCCceecCCCeeee-----eeeEEEEEEe
Confidence            89999886      48899999987643 3466788999999997431 1112111110  1111     4567888999


Q ss_pred             cCCCC
Q 005958          182 QYHGS  186 (667)
Q Consensus       182 ~~~~~  186 (667)
                       +++|
T Consensus       105 -~~~G  108 (325)
T d1zyla1         105 -SVGG  108 (325)
T ss_dssp             -CCCC
T ss_pred             -ecCC
Confidence             8876


No 69 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.72  E-value=0.012  Score=58.25  Aligned_cols=56  Identities=9%  Similarity=0.167  Sum_probs=36.1

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEEcchhhHHHHHHHHHHHHHHhh
Q 005958           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVR  149 (667)
Q Consensus        83 ~~~~~y~i~~~LG~G~fG~~~~~Vy~a~~~~~~~~~tg~~vAvK~i~~~~~~~~~~rEi~iL~~L~~  149 (667)
                      +.++...-.+.|..|---    +.|+.....       ..|++|+.......+++..|++++..|..
T Consensus        15 Y~lg~~~~~~~i~~G~~N----~ny~v~t~~-------g~yVLri~~~~~~~~~l~~~~~~l~~L~~   70 (316)
T d2ppqa1          15 YDVGSLTSYKGIAEGVEN----SNFLLHTTK-------DPLILTLYEKRVEKNDLPFFLGLMQHLAA   70 (316)
T ss_dssp             BCCCCEEEEEEECC---E----EEEEEEESS-------CCEEEEEECC---CCHHHHHHHHHHHHHH
T ss_pred             CCCCCceEeecCCCCccc----CeEEEEECC-------CcEEEEEcCCCCCHHHHHHHHHHHHhhhh
Confidence            344555556667777666    889887553       45999998765455667889999999964


No 70 
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=28.89  E-value=33  Score=33.56  Aligned_cols=45  Identities=11%  Similarity=0.012  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCcccCCCCCcEEEcCCCCeEEEeeecccc
Q 005958          233 IRLLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAA  280 (667)
Q Consensus       233 i~~i~~QIl~aL~yLHs~gIvHrDLKPeNILl~~~~~~vKL~DFGlA~  280 (667)
                      ...+++.++-.---.+=.||  +|=.++||||+. +|++.=+|||..-
T Consensus       200 ~~nF~~S~A~~sv~~YiLGi--gDRH~~NILi~~-~G~l~HIDFG~il  244 (369)
T d1e7ua4         200 VERFVYSCAGYCVATFVLGI--GDRHNDNIMISE-TGNLFHIDFGHIL  244 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEET-TCCEEECCCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHhcc--CCCCCCeeEEeC-CCCEEecchhhhh
Confidence            34455555443333333455  788999999997 8999999999874


No 71 
>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.94  E-value=20  Score=32.18  Aligned_cols=50  Identities=18%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             CchHHHHHHHHHHhc--CC-cccccccccc-ccccccceeEEEeccCCceeE-Ee
Q 005958          614 NVDAAKNIVQEVRTQ--IP-PEMFDLSKFV-CGTYVDSRFLVLRGVNGSALL-FT  663 (667)
Q Consensus       614 ~~~~~~~~~~~~~~~--~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~  663 (667)
                      -++.-++-++|.+.-  .+ |+.+-|+=.- =.-+.++|.+|||||+...++ ||
T Consensus        12 P~~~f~~W~~~A~~~~~~~~p~a~~LATvd~~~G~P~~RtVllr~~~~~g~~fft   66 (205)
T d1ci0a_          12 PIDLFTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYS   66 (205)
T ss_dssp             HHHHHHHHHHHHHHCSSCSCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEeecCCCccchhhHHHHhhccceEEEEE
Confidence            345667778888653  22 6777777653 234789999999999986664 55


Done!