Query 005959
Match_columns 667
No_of_seqs 595 out of 3112
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 12:09:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.7 8E-17 2.7E-21 165.7 9.5 128 219-358 10-138 (257)
2 3hnr_A Probable methyltransfer 99.6 2.3E-14 7.7E-19 140.9 17.2 102 254-360 46-150 (220)
3 1vl5_A Unknown conserved prote 99.6 9.7E-15 3.3E-19 147.8 13.1 112 235-358 27-143 (260)
4 1pjz_A Thiopurine S-methyltran 99.6 6.5E-15 2.2E-19 145.0 10.3 99 254-355 23-140 (203)
5 3dh0_A SAM dependent methyltra 99.6 1.6E-14 5.4E-19 141.9 12.0 135 254-389 38-177 (219)
6 4gek_A TRNA (CMO5U34)-methyltr 99.5 2.3E-14 8E-19 147.4 13.2 105 253-360 70-183 (261)
7 3l8d_A Methyltransferase; stru 99.5 5.9E-14 2E-18 139.7 15.5 132 254-389 54-196 (242)
8 3dlc_A Putative S-adenosyl-L-m 99.5 8.7E-14 3E-18 135.5 15.7 103 255-360 45-153 (219)
9 2p7i_A Hypothetical protein; p 99.5 3.9E-14 1.3E-18 140.5 13.5 102 254-360 43-146 (250)
10 3h2b_A SAM-dependent methyltra 99.5 2.6E-14 8.8E-19 139.0 11.7 134 254-390 42-179 (203)
11 3i9f_A Putative type 11 methyl 99.5 3.1E-14 1.1E-18 134.6 11.6 99 254-359 18-116 (170)
12 3ege_A Putative methyltransfer 99.5 3.5E-14 1.2E-18 144.5 11.4 113 232-358 21-133 (261)
13 1nkv_A Hypothetical protein YJ 99.5 4.3E-14 1.5E-18 142.1 11.7 115 231-357 22-142 (256)
14 2gs9_A Hypothetical protein TT 99.5 1.1E-13 3.9E-18 135.2 14.4 101 253-359 36-136 (211)
15 3g5l_A Putative S-adenosylmeth 99.5 5.5E-14 1.9E-18 141.5 12.3 103 253-358 44-148 (253)
16 3ujc_A Phosphoethanolamine N-m 99.5 3.8E-14 1.3E-18 142.6 11.0 105 253-359 55-163 (266)
17 3bus_A REBM, methyltransferase 99.5 8.3E-14 2.9E-18 141.6 13.0 103 253-358 61-169 (273)
18 2p35_A Trans-aconitate 2-methy 99.5 1E-13 3.5E-18 139.4 12.9 103 253-358 33-135 (259)
19 3kkz_A Uncharacterized protein 99.5 1E-13 3.5E-18 141.1 12.9 101 253-357 46-152 (267)
20 1xxl_A YCGJ protein; structura 99.5 1.3E-13 4.5E-18 138.3 13.3 101 254-358 22-127 (239)
21 2o57_A Putative sarcosine dime 99.5 9.3E-14 3.2E-18 143.3 12.5 103 253-358 82-190 (297)
22 2yqz_A Hypothetical protein TT 99.5 1.4E-13 4.9E-18 138.5 13.5 98 253-354 39-140 (263)
23 3ccf_A Cyclopropane-fatty-acyl 99.5 1.3E-13 4.5E-18 141.3 13.4 101 254-359 58-158 (279)
24 2avn_A Ubiquinone/menaquinone 99.5 1.4E-13 4.7E-18 139.9 12.4 102 253-358 54-155 (260)
25 3dli_A Methyltransferase; PSI- 99.5 1.1E-13 3.6E-18 138.7 11.4 101 253-360 41-145 (240)
26 3thr_A Glycine N-methyltransfe 99.5 9.3E-14 3.2E-18 142.9 11.0 115 231-357 43-177 (293)
27 3ofk_A Nodulation protein S; N 99.5 2.6E-13 8.8E-18 133.2 13.6 101 253-358 51-157 (216)
28 3ou2_A SAM-dependent methyltra 99.5 1.9E-13 6.6E-18 133.4 12.6 100 254-358 47-149 (218)
29 3f4k_A Putative methyltransfer 99.5 1.8E-13 6E-18 137.7 12.6 101 253-357 46-152 (257)
30 2gb4_A Thiopurine S-methyltran 99.5 1.7E-13 5.9E-18 140.3 12.5 99 254-355 69-191 (252)
31 3jwh_A HEN1; methyltransferase 99.5 2.6E-13 8.9E-18 133.6 13.2 101 254-356 30-142 (217)
32 1xtp_A LMAJ004091AAA; SGPP, st 99.5 9.9E-14 3.4E-18 139.1 10.3 103 253-357 93-199 (254)
33 3bkw_A MLL3908 protein, S-aden 99.5 2.8E-13 9.5E-18 134.7 13.4 101 254-357 44-146 (243)
34 4fsd_A Arsenic methyltransfera 99.5 1.5E-13 5.1E-18 148.4 11.5 105 253-358 83-206 (383)
35 3dtn_A Putative methyltransfer 99.5 1.1E-13 3.9E-18 137.4 9.8 105 253-360 44-153 (234)
36 3jwg_A HEN1, methyltransferase 99.5 3.6E-13 1.2E-17 132.6 13.2 101 254-356 30-142 (219)
37 4htf_A S-adenosylmethionine-de 99.5 2.2E-13 7.4E-18 140.0 11.8 101 254-358 69-176 (285)
38 3pfg_A N-methyltransferase; N, 99.5 3.7E-13 1.2E-17 136.5 13.3 98 254-356 51-152 (263)
39 3g5t_A Trans-aconitate 3-methy 99.5 1.4E-13 4.8E-18 142.7 10.2 101 253-355 36-149 (299)
40 2aot_A HMT, histamine N-methyl 99.4 8.6E-14 2.9E-18 144.1 8.3 104 253-358 52-175 (292)
41 3sm3_A SAM-dependent methyltra 99.4 8.6E-13 2.9E-17 130.1 15.1 103 254-360 31-146 (235)
42 2kw5_A SLR1183 protein; struct 99.4 7.4E-13 2.5E-17 128.5 13.5 100 256-360 32-136 (202)
43 3e23_A Uncharacterized protein 99.4 1.8E-13 6.2E-18 134.0 8.9 101 254-359 44-145 (211)
44 3gu3_A Methyltransferase; alph 99.4 6E-13 2.1E-17 137.2 13.1 103 253-357 22-128 (284)
45 1ve3_A Hypothetical protein PH 99.4 6.4E-13 2.2E-17 130.7 12.7 101 254-357 39-144 (227)
46 4e2x_A TCAB9; kijanose, tetron 99.4 8.5E-14 2.9E-18 151.2 6.9 102 253-358 107-211 (416)
47 2p8j_A S-adenosylmethionine-de 99.4 5E-13 1.7E-17 130.0 11.5 103 254-359 24-132 (209)
48 3e8s_A Putative SAM dependent 99.4 5.8E-13 2E-17 130.3 11.9 101 254-360 53-157 (227)
49 3bxo_A N,N-dimethyltransferase 99.4 7.2E-13 2.5E-17 131.4 12.6 102 253-358 40-144 (239)
50 3lcc_A Putative methyl chlorid 99.4 8.7E-13 3E-17 131.5 13.2 129 255-389 68-203 (235)
51 3vc1_A Geranyl diphosphate 2-C 99.4 8.7E-13 3E-17 137.8 13.8 103 253-359 117-225 (312)
52 3cgg_A SAM-dependent methyltra 99.4 1.9E-12 6.4E-17 123.5 15.0 103 253-358 46-150 (195)
53 2ex4_A Adrenal gland protein A 99.4 3.9E-13 1.3E-17 134.7 10.7 103 253-358 79-188 (241)
54 2pxx_A Uncharacterized protein 99.4 6.8E-13 2.3E-17 129.0 11.8 104 253-358 42-162 (215)
55 2xvm_A Tellurite resistance pr 99.4 1.1E-12 3.8E-17 126.2 13.2 100 254-357 33-138 (199)
56 3mgg_A Methyltransferase; NYSG 99.4 5.2E-13 1.8E-17 136.1 11.0 104 253-358 37-145 (276)
57 1dus_A MJ0882; hypothetical pr 99.4 1.4E-12 4.9E-17 124.2 13.2 131 216-359 21-161 (194)
58 1y8c_A S-adenosylmethionine-de 99.4 7.8E-13 2.7E-17 131.3 11.7 101 253-357 37-144 (246)
59 1kpg_A CFA synthase;, cyclopro 99.4 1.2E-12 4.2E-17 134.2 12.8 102 253-359 64-172 (287)
60 1vlm_A SAM-dependent methyltra 99.4 1.6E-12 5.4E-17 128.6 12.4 96 254-359 48-143 (219)
61 1zx0_A Guanidinoacetate N-meth 99.4 5.7E-13 2E-17 133.4 9.3 101 254-356 61-171 (236)
62 3mti_A RRNA methylase; SAM-dep 99.4 1.9E-12 6.5E-17 124.1 12.6 103 253-358 22-138 (185)
63 3g2m_A PCZA361.24; SAM-depende 99.4 7.9E-13 2.7E-17 137.0 10.6 102 255-360 84-195 (299)
64 3hem_A Cyclopropane-fatty-acyl 99.4 1.9E-12 6.6E-17 134.3 13.1 101 253-360 72-188 (302)
65 2vdw_A Vaccinia virus capping 99.4 7.5E-13 2.6E-17 139.0 9.7 101 254-357 49-171 (302)
66 3cc8_A Putative methyltransfer 99.4 2E-12 6.7E-17 126.8 11.7 101 253-359 32-134 (230)
67 3orh_A Guanidinoacetate N-meth 99.4 9.4E-13 3.2E-17 132.8 9.6 113 231-355 47-170 (236)
68 3ocj_A Putative exported prote 99.4 1.6E-12 5.5E-17 135.4 11.1 104 253-358 118-230 (305)
69 2a14_A Indolethylamine N-methy 99.4 6.2E-13 2.1E-17 135.9 7.8 104 253-358 55-200 (263)
70 3d2l_A SAM-dependent methyltra 99.4 2.8E-12 9.5E-17 127.4 11.9 98 254-357 34-139 (243)
71 2g72_A Phenylethanolamine N-me 99.4 1.2E-12 4.1E-17 135.0 9.5 102 253-356 71-216 (289)
72 1wzn_A SAM-dependent methyltra 99.3 5.4E-12 1.9E-16 126.6 13.1 101 253-357 41-147 (252)
73 2fk8_A Methoxy mycolic acid sy 99.3 4.7E-12 1.6E-16 132.1 12.8 102 253-360 90-199 (318)
74 3m70_A Tellurite resistance pr 99.3 6.2E-12 2.1E-16 129.1 13.4 100 254-357 121-225 (286)
75 1ri5_A MRNA capping enzyme; me 99.3 3.1E-12 1.1E-16 131.0 10.7 103 253-357 64-176 (298)
76 2i62_A Nicotinamide N-methyltr 99.3 2E-12 6.8E-17 130.2 9.1 104 253-358 56-201 (265)
77 3e05_A Precorrin-6Y C5,15-meth 99.3 3.1E-11 1.1E-15 117.8 17.2 99 254-357 41-144 (204)
78 3iv6_A Putative Zn-dependent a 99.3 3.8E-12 1.3E-16 131.4 11.1 100 254-358 46-151 (261)
79 3ggd_A SAM-dependent methyltra 99.3 2E-12 6.8E-17 129.5 8.8 104 253-360 56-168 (245)
80 1p91_A Ribosomal RNA large sub 99.3 4.1E-12 1.4E-16 129.1 11.0 99 253-360 85-183 (269)
81 3bgv_A MRNA CAP guanine-N7 met 99.3 3.4E-12 1.1E-16 133.3 10.3 102 253-357 34-157 (313)
82 3g07_A 7SK snRNA methylphospha 99.3 3.7E-12 1.3E-16 132.3 10.4 102 253-356 46-221 (292)
83 3p9n_A Possible methyltransfer 99.3 9.5E-12 3.2E-16 120.1 12.4 103 253-358 44-156 (189)
84 3bkx_A SAM-dependent methyltra 99.3 4.5E-12 1.5E-16 128.9 10.0 105 254-359 44-163 (275)
85 3m33_A Uncharacterized protein 99.3 3.7E-12 1.3E-16 126.8 8.3 89 254-352 49-139 (226)
86 2zfu_A Nucleomethylin, cerebra 99.3 9E-12 3.1E-16 122.2 10.7 109 254-390 68-176 (215)
87 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.1E-11 7.2E-16 115.3 12.8 99 254-358 26-130 (178)
88 3fpf_A Mtnas, putative unchara 99.3 1.6E-11 5.6E-16 128.7 12.7 97 253-356 122-223 (298)
89 3htx_A HEN1; HEN1, small RNA m 99.3 2E-11 6.9E-16 141.8 14.4 103 254-358 722-837 (950)
90 3eey_A Putative rRNA methylase 99.3 2.1E-11 7E-16 118.0 12.2 105 254-358 23-142 (197)
91 2yxd_A Probable cobalt-precorr 99.3 4.2E-11 1.4E-15 113.1 13.8 108 231-357 21-133 (183)
92 3dmg_A Probable ribosomal RNA 99.3 2.7E-11 9.2E-16 131.3 14.0 102 253-358 233-343 (381)
93 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.5E-11 8.5E-16 119.6 11.8 101 254-356 42-157 (214)
94 2fca_A TRNA (guanine-N(7)-)-me 99.2 1.8E-11 6.3E-16 121.3 10.7 101 254-356 39-154 (213)
95 3q87_B N6 adenine specific DNA 99.2 1.6E-11 5.6E-16 117.3 9.9 93 254-357 24-125 (170)
96 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.1E-11 3.9E-16 123.8 8.9 102 254-357 35-152 (218)
97 2qe6_A Uncharacterized protein 99.2 3.5E-11 1.2E-15 124.5 12.5 104 254-359 78-200 (274)
98 3grz_A L11 mtase, ribosomal pr 99.2 2.1E-11 7.2E-16 118.9 10.2 98 253-358 60-162 (205)
99 1nt2_A Fibrillarin-like PRE-rR 99.2 2.9E-11 9.8E-16 120.1 11.2 98 253-356 57-162 (210)
100 3njr_A Precorrin-6Y methylase; 99.2 7.5E-11 2.6E-15 116.2 14.0 96 254-358 56-157 (204)
101 2ift_A Putative methylase HI07 99.2 3.2E-11 1.1E-15 118.4 10.7 101 254-358 54-166 (201)
102 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.8E-11 9.5E-16 122.4 10.5 103 253-357 46-170 (235)
103 1l3i_A Precorrin-6Y methyltran 99.2 1.3E-10 4.4E-15 110.4 14.5 96 254-357 34-136 (192)
104 3uwp_A Histone-lysine N-methyl 99.2 2E-11 6.7E-16 133.1 9.7 119 230-359 158-292 (438)
105 1xdz_A Methyltransferase GIDB; 99.2 4.5E-11 1.5E-15 120.2 11.6 98 253-356 70-175 (240)
106 3evz_A Methyltransferase; NYSG 99.2 7.5E-11 2.6E-15 116.8 12.6 102 253-357 55-181 (230)
107 3lbf_A Protein-L-isoaspartate 99.2 6.7E-11 2.3E-15 115.6 11.8 94 254-357 78-176 (210)
108 3q7e_A Protein arginine N-meth 99.2 4.6E-11 1.6E-15 127.6 11.2 99 253-354 66-172 (349)
109 3mq2_A 16S rRNA methyltransfer 99.2 3.3E-11 1.1E-15 118.6 9.2 101 254-356 28-141 (218)
110 4df3_A Fibrillarin-like rRNA/T 99.2 5.6E-11 1.9E-15 120.7 10.9 104 250-356 74-183 (233)
111 1vbf_A 231AA long hypothetical 99.2 7.5E-11 2.6E-15 116.9 11.6 94 254-357 71-167 (231)
112 2fyt_A Protein arginine N-meth 99.2 4.7E-11 1.6E-15 127.1 10.6 96 254-352 65-168 (340)
113 3hp7_A Hemolysin, putative; st 99.2 1E-10 3.4E-15 122.5 12.3 130 253-388 85-227 (291)
114 2pjd_A Ribosomal RNA small sub 99.2 4.8E-11 1.6E-15 126.9 9.7 100 255-358 198-306 (343)
115 2fpo_A Methylase YHHF; structu 99.2 1.3E-10 4.3E-15 114.2 12.0 100 254-357 55-162 (202)
116 3dp7_A SAM-dependent methyltra 99.2 9.2E-11 3.1E-15 125.6 11.8 105 253-360 179-292 (363)
117 2r3s_A Uncharacterized protein 99.2 1.2E-10 4E-15 122.1 12.2 104 253-359 165-275 (335)
118 1ws6_A Methyltransferase; stru 99.2 4.4E-11 1.5E-15 112.2 7.7 100 254-359 42-151 (171)
119 2fhp_A Methylase, putative; al 99.2 8.9E-11 3E-15 111.9 9.9 118 230-358 28-157 (187)
120 3i53_A O-methyltransferase; CO 99.2 1.4E-10 4.7E-15 122.2 12.2 104 253-360 169-279 (332)
121 4dcm_A Ribosomal RNA large sub 99.2 1.4E-10 5E-15 125.3 12.7 100 255-357 224-336 (375)
122 1af7_A Chemotaxis receptor met 99.1 1.9E-10 6.5E-15 119.4 12.8 100 254-354 106-251 (274)
123 4dzr_A Protein-(glutamine-N5) 99.1 2.2E-11 7.5E-16 118.1 5.4 102 253-356 30-165 (215)
124 1ej0_A FTSJ; methyltransferase 99.1 4.7E-11 1.6E-15 111.4 7.3 98 254-359 23-140 (180)
125 1jsx_A Glucose-inhibited divis 99.1 1.9E-10 6.4E-15 111.9 11.7 96 254-356 66-166 (207)
126 3g89_A Ribosomal RNA small sub 99.1 1.8E-10 6.1E-15 117.5 11.9 98 253-356 80-185 (249)
127 2esr_A Methyltransferase; stru 99.1 8.8E-11 3E-15 111.6 8.9 101 254-358 32-141 (177)
128 3p2e_A 16S rRNA methylase; met 99.1 6.1E-11 2.1E-15 119.1 7.8 101 254-355 25-139 (225)
129 3u81_A Catechol O-methyltransf 99.1 1.3E-10 4.6E-15 115.1 9.9 103 254-358 59-173 (221)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.1 2.1E-10 7E-15 115.3 11.4 99 254-358 97-201 (258)
131 1i9g_A Hypothetical protein RV 99.1 1.8E-10 6.2E-15 117.6 11.2 99 254-358 100-206 (280)
132 3r0q_C Probable protein argini 99.1 1E-10 3.5E-15 126.2 9.8 100 253-356 63-170 (376)
133 3fzg_A 16S rRNA methylase; met 99.1 5.3E-11 1.8E-15 117.3 6.7 100 253-355 49-152 (200)
134 1dl5_A Protein-L-isoaspartate 99.1 1.8E-10 6.2E-15 121.1 11.2 110 232-356 62-176 (317)
135 1g6q_1 HnRNP arginine N-methyl 99.1 2.5E-10 8.7E-15 120.8 12.0 112 231-353 24-143 (328)
136 1yb2_A Hypothetical protein TA 99.1 2.5E-10 8.6E-15 117.2 11.6 98 253-357 110-213 (275)
137 3lpm_A Putative methyltransfer 99.1 2.6E-10 8.8E-15 116.0 11.5 102 254-357 50-178 (259)
138 2yxe_A Protein-L-isoaspartate 99.1 2.5E-10 8.7E-15 111.8 11.0 97 254-357 78-179 (215)
139 1fbn_A MJ fibrillarin homologu 99.1 2.8E-10 9.4E-15 113.6 11.5 94 253-354 74-177 (230)
140 2bm8_A Cephalosporin hydroxyla 99.1 8.8E-11 3E-15 118.6 7.9 99 254-356 82-188 (236)
141 3gdh_A Trimethylguanosine synt 99.1 9.1E-12 3.1E-16 124.5 0.6 96 254-354 79-180 (241)
142 3opn_A Putative hemolysin; str 99.1 3.6E-11 1.2E-15 121.6 5.0 96 254-355 38-137 (232)
143 3gwz_A MMCR; methyltransferase 99.1 4.8E-10 1.6E-14 120.3 13.5 102 253-359 202-311 (369)
144 3mb5_A SAM-dependent methyltra 99.1 2.4E-10 8.2E-15 115.1 10.5 98 254-358 94-197 (255)
145 3sso_A Methyltransferase; macr 99.1 3.9E-11 1.3E-15 130.4 4.9 99 253-357 216-326 (419)
146 2ld4_A Anamorsin; methyltransf 99.1 5.6E-11 1.9E-15 113.2 5.4 87 253-357 12-103 (176)
147 2frn_A Hypothetical protein PH 99.1 2.3E-10 7.9E-15 118.3 10.3 122 254-389 126-253 (278)
148 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.4E-10 8.3E-15 114.0 10.0 100 253-356 77-183 (233)
149 3tfw_A Putative O-methyltransf 99.1 5E-10 1.7E-14 113.5 12.3 100 254-357 64-172 (248)
150 2y1w_A Histone-arginine methyl 99.1 2.2E-10 7.5E-15 122.2 10.1 113 231-355 36-155 (348)
151 3ntv_A MW1564 protein; rossman 99.1 3.8E-10 1.3E-14 113.0 11.2 99 254-357 72-178 (232)
152 1i1n_A Protein-L-isoaspartate 99.1 5.5E-10 1.9E-14 110.4 11.9 98 253-357 77-184 (226)
153 1qzz_A RDMB, aclacinomycin-10- 99.1 4.2E-10 1.4E-14 120.0 11.5 100 253-356 182-288 (374)
154 2ozv_A Hypothetical protein AT 99.1 4.6E-10 1.6E-14 114.8 11.3 102 254-356 37-171 (260)
155 3id6_C Fibrillarin-like rRNA/T 99.1 4E-10 1.4E-14 114.3 10.7 100 252-356 75-182 (232)
156 2vdv_E TRNA (guanine-N(7)-)-me 99.1 4.2E-10 1.4E-14 113.6 10.9 102 254-357 50-175 (246)
157 1x19_A CRTF-related protein; m 99.1 6.2E-10 2.1E-14 118.5 12.5 102 253-358 190-298 (359)
158 3dr5_A Putative O-methyltransf 99.0 4E-10 1.4E-14 112.8 9.8 99 255-357 58-165 (221)
159 3giw_A Protein of unknown func 99.0 2.5E-10 8.5E-15 118.5 8.6 106 253-359 78-204 (277)
160 2pbf_A Protein-L-isoaspartate 99.0 5.4E-10 1.8E-14 110.6 10.6 97 254-357 81-195 (227)
161 2nxc_A L11 mtase, ribosomal pr 99.0 2.6E-10 9E-15 116.2 8.5 96 254-357 121-220 (254)
162 2plw_A Ribosomal RNA methyltra 99.0 4.8E-10 1.6E-14 108.5 9.8 98 254-358 23-157 (201)
163 2gpy_A O-methyltransferase; st 99.0 6.8E-10 2.3E-14 110.6 10.7 98 254-356 55-161 (233)
164 1fp1_D Isoliquiritigenin 2'-O- 99.0 3.7E-10 1.3E-14 121.0 8.9 98 253-357 209-308 (372)
165 1tw3_A COMT, carminomycin 4-O- 99.0 7.6E-10 2.6E-14 117.5 11.2 101 253-357 183-290 (360)
166 2ip2_A Probable phenazine-spec 99.0 5.4E-10 1.9E-14 117.4 10.0 100 255-358 169-275 (334)
167 1u2z_A Histone-lysine N-methyl 99.0 6.3E-10 2.2E-14 122.4 10.8 102 254-358 243-362 (433)
168 1ixk_A Methyltransferase; open 99.0 1.9E-09 6.4E-14 113.6 13.9 106 254-359 119-250 (315)
169 2yvl_A TRMI protein, hypotheti 99.0 1.3E-09 4.5E-14 108.7 12.0 95 254-357 92-192 (248)
170 3bwc_A Spermidine synthase; SA 99.0 7.1E-10 2.4E-14 116.3 10.5 104 253-358 95-213 (304)
171 3tr6_A O-methyltransferase; ce 99.0 5.5E-10 1.9E-14 110.2 9.0 100 254-357 65-176 (225)
172 3reo_A (ISO)eugenol O-methyltr 99.0 5.8E-10 2E-14 119.8 9.7 101 253-359 203-304 (368)
173 3p9c_A Caffeic acid O-methyltr 99.0 7.4E-10 2.5E-14 118.9 10.4 101 253-359 201-302 (364)
174 3c3p_A Methyltransferase; NP_9 99.0 9.8E-10 3.4E-14 107.7 10.3 98 254-356 57-161 (210)
175 1o9g_A RRNA methyltransferase; 99.0 8E-10 2.8E-14 111.5 9.9 104 253-356 51-215 (250)
176 1fp2_A Isoflavone O-methyltran 99.0 5.5E-10 1.9E-14 118.7 9.0 100 253-359 188-292 (352)
177 3mcz_A O-methyltransferase; ad 99.0 6.9E-10 2.4E-14 117.5 9.7 104 254-359 180-291 (352)
178 3lst_A CALO1 methyltransferase 99.0 1.2E-09 4.1E-14 116.0 11.5 102 253-359 184-290 (348)
179 1jg1_A PIMT;, protein-L-isoasp 99.0 8.9E-10 3E-14 110.2 9.9 109 232-358 78-192 (235)
180 3duw_A OMT, O-methyltransferas 99.0 1.4E-09 4.7E-14 107.3 11.0 100 254-357 59-169 (223)
181 2b3t_A Protein methyltransfera 99.0 3.3E-09 1.1E-13 108.8 14.0 102 254-357 110-240 (276)
182 1o54_A SAM-dependent O-methylt 99.0 1.6E-09 5.5E-14 111.1 11.3 97 254-357 113-215 (277)
183 2b25_A Hypothetical protein; s 99.0 1.1E-09 3.6E-14 115.8 10.2 98 254-357 106-221 (336)
184 1g8a_A Fibrillarin-like PRE-rR 99.0 1.6E-09 5.5E-14 107.3 10.8 99 253-355 73-178 (227)
185 3adn_A Spermidine synthase; am 99.0 1.9E-09 6.5E-14 112.8 11.8 102 253-356 83-199 (294)
186 3bzb_A Uncharacterized protein 99.0 2.6E-09 9E-14 110.4 12.4 101 253-356 79-206 (281)
187 2wa2_A Non-structural protein 99.0 2.9E-10 9.8E-15 118.1 5.1 97 253-358 82-196 (276)
188 1r18_A Protein-L-isoaspartate( 99.0 1.5E-09 5.1E-14 107.8 10.1 96 254-357 85-196 (227)
189 3tma_A Methyltransferase; thum 99.0 2.1E-09 7.1E-14 114.5 11.8 103 254-357 204-319 (354)
190 2oxt_A Nucleoside-2'-O-methylt 99.0 4.5E-10 1.5E-14 115.9 6.4 96 253-357 74-187 (265)
191 4azs_A Methyltransferase WBDD; 99.0 5.8E-10 2E-14 126.7 7.8 102 253-358 66-176 (569)
192 1xj5_A Spermidine synthase 1; 98.9 4.9E-09 1.7E-13 111.7 13.8 103 253-357 120-237 (334)
193 2hnk_A SAM-dependent O-methylt 98.9 2.4E-09 8.4E-14 107.2 10.5 99 254-356 61-182 (239)
194 1ne2_A Hypothetical protein TA 98.9 8.3E-09 2.8E-13 100.1 13.5 95 253-354 51-146 (200)
195 3b3j_A Histone-arginine methyl 98.9 1.7E-09 5.7E-14 120.7 9.1 98 253-354 158-262 (480)
196 3r3h_A O-methyltransferase, SA 98.9 5.2E-10 1.8E-14 113.4 4.0 100 254-357 61-172 (242)
197 2nyu_A Putative ribosomal RNA 98.9 2.9E-09 9.8E-14 102.4 8.9 99 254-358 23-148 (196)
198 3cbg_A O-methyltransferase; cy 98.9 3.6E-09 1.2E-13 106.1 9.9 100 254-357 73-184 (232)
199 1uir_A Polyamine aminopropyltr 98.9 3.2E-09 1.1E-13 111.8 10.0 102 253-356 77-196 (314)
200 2igt_A SAM dependent methyltra 98.9 3.6E-09 1.2E-13 112.5 10.3 102 254-358 154-275 (332)
201 3gjy_A Spermidine synthase; AP 98.9 4E-09 1.4E-13 111.6 10.6 100 255-356 91-201 (317)
202 1iy9_A Spermidine synthase; ro 98.9 8.5E-09 2.9E-13 106.6 12.8 103 253-357 75-191 (275)
203 2pt6_A Spermidine synthase; tr 98.9 6.3E-09 2.1E-13 110.1 12.0 104 253-358 116-233 (321)
204 2b2c_A Spermidine synthase; be 98.9 5.9E-09 2E-13 110.1 11.7 102 253-356 108-223 (314)
205 1inl_A Spermidine synthase; be 98.9 8.1E-09 2.8E-13 107.9 12.5 103 253-357 90-207 (296)
206 2i7c_A Spermidine synthase; tr 98.9 8.2E-09 2.8E-13 107.1 12.2 104 253-358 78-195 (283)
207 2o07_A Spermidine synthase; st 98.9 4.2E-09 1.4E-13 110.6 10.0 103 253-357 95-211 (304)
208 1sui_A Caffeoyl-COA O-methyltr 98.9 3.1E-09 1.1E-13 108.0 8.7 99 254-356 80-191 (247)
209 3ajd_A Putative methyltransfer 98.9 4.6E-09 1.6E-13 108.1 9.9 106 254-359 84-215 (274)
210 1zg3_A Isoflavanone 4'-O-methy 98.9 2.7E-09 9.1E-14 113.7 8.3 99 253-358 193-296 (358)
211 2yxl_A PH0851 protein, 450AA l 98.9 1.1E-08 3.9E-13 112.8 13.6 107 254-360 260-394 (450)
212 4hc4_A Protein arginine N-meth 98.9 4.9E-09 1.7E-13 113.4 10.2 96 254-353 84-187 (376)
213 2avd_A Catechol-O-methyltransf 98.9 4E-09 1.4E-13 104.3 8.6 100 254-357 70-181 (229)
214 3a27_A TYW2, uncharacterized p 98.9 9.8E-09 3.4E-13 105.8 11.6 99 253-358 119-222 (272)
215 2h00_A Methyltransferase 10 do 98.8 8.1E-10 2.8E-14 111.5 3.2 102 253-355 65-192 (254)
216 1nv8_A HEMK protein; class I a 98.8 1.2E-08 4E-13 106.0 11.1 98 255-356 125-250 (284)
217 1mjf_A Spermidine synthase; sp 98.8 8E-09 2.7E-13 107.0 9.4 100 253-356 75-194 (281)
218 2cmg_A Spermidine synthase; tr 98.8 1.2E-08 4.2E-13 104.9 10.6 92 253-356 72-172 (262)
219 2p41_A Type II methyltransfera 98.8 1.7E-09 5.8E-14 113.8 4.2 100 253-358 82-194 (305)
220 2qm3_A Predicted methyltransfe 98.8 3.6E-08 1.2E-12 106.0 14.6 100 253-356 172-279 (373)
221 4a6d_A Hydroxyindole O-methylt 98.8 3.1E-08 1E-12 105.8 13.4 103 253-359 179-287 (353)
222 3dou_A Ribosomal RNA large sub 98.8 1.2E-08 4.2E-13 99.7 9.3 95 254-358 26-142 (191)
223 1sqg_A SUN protein, FMU protei 98.8 1.7E-08 5.7E-13 110.7 11.3 105 254-359 247-378 (429)
224 3c3y_A Pfomt, O-methyltransfer 98.8 1.2E-08 4.1E-13 102.7 9.1 99 254-356 71-182 (237)
225 1wy7_A Hypothetical protein PH 98.8 1.3E-07 4.5E-12 91.8 16.1 95 253-354 49-148 (207)
226 3m6w_A RRNA methylase; rRNA me 98.8 1.6E-08 5.6E-13 112.2 10.7 107 254-360 102-234 (464)
227 3lec_A NADB-rossmann superfami 98.8 3.4E-08 1.2E-12 100.0 12.0 120 254-391 22-147 (230)
228 1zq9_A Probable dimethyladenos 98.8 1.7E-08 5.8E-13 104.8 9.9 108 231-352 14-144 (285)
229 3gnl_A Uncharacterized protein 98.8 3.8E-08 1.3E-12 100.4 11.9 119 254-390 22-146 (244)
230 3tm4_A TRNA (guanine N2-)-meth 98.7 5.3E-08 1.8E-12 104.9 12.8 100 254-356 218-330 (373)
231 2frx_A Hypothetical protein YE 98.7 3.7E-08 1.3E-12 109.8 11.4 106 254-359 118-250 (479)
232 4dmg_A Putative uncharacterize 98.7 3.6E-08 1.2E-12 107.2 9.8 103 254-359 215-330 (393)
233 3kr9_A SAM-dependent methyltra 98.7 9.3E-08 3.2E-12 96.5 12.1 118 254-390 16-140 (225)
234 2b78_A Hypothetical protein SM 98.7 3.5E-08 1.2E-12 106.8 9.1 104 254-359 213-335 (385)
235 3c0k_A UPF0064 protein YCCW; P 98.6 8.6E-08 2.9E-12 103.8 10.6 104 254-359 221-343 (396)
236 2f8l_A Hypothetical protein LM 98.6 7.4E-08 2.5E-12 102.2 9.5 104 253-357 130-258 (344)
237 2as0_A Hypothetical protein PH 98.6 4.4E-08 1.5E-12 106.1 7.8 104 254-359 218-339 (396)
238 2h1r_A Dimethyladenosine trans 98.6 9E-08 3.1E-12 100.1 9.8 86 232-331 29-119 (299)
239 3v97_A Ribosomal RNA large sub 98.6 4.4E-08 1.5E-12 114.0 8.1 102 254-357 540-659 (703)
240 1wxx_A TT1595, hypothetical pr 98.6 5.2E-08 1.8E-12 105.1 8.1 103 254-359 210-329 (382)
241 3frh_A 16S rRNA methylase; met 98.6 8.6E-08 2.9E-12 97.6 8.5 97 253-355 105-206 (253)
242 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.3E-07 4.4E-12 104.8 10.6 107 254-360 106-239 (456)
243 2xyq_A Putative 2'-O-methyl tr 98.6 2.4E-07 8.1E-12 96.9 11.2 94 253-358 63-174 (290)
244 1yub_A Ermam, rRNA methyltrans 98.5 4.6E-09 1.6E-13 106.2 -1.9 110 232-354 16-144 (245)
245 3k6r_A Putative transferase PH 98.5 3.7E-07 1.3E-11 94.9 12.3 96 254-357 126-227 (278)
246 2ih2_A Modification methylase 98.5 1.3E-07 4.5E-12 102.1 9.1 99 254-357 40-166 (421)
247 1qam_A ERMC' methyltransferase 98.5 1.8E-07 6.1E-12 94.9 9.4 70 253-326 30-103 (244)
248 2jjq_A Uncharacterized RNA met 98.5 7E-07 2.4E-11 98.0 14.2 95 253-356 290-388 (425)
249 3lcv_B Sisomicin-gentamicin re 98.5 2.9E-07 9.9E-12 94.7 10.3 101 253-356 132-237 (281)
250 2yx1_A Hypothetical protein MJ 98.5 2.7E-07 9.4E-12 97.9 9.7 94 254-359 196-295 (336)
251 3gru_A Dimethyladenosine trans 98.5 4.9E-07 1.7E-11 94.7 10.5 88 231-330 36-126 (295)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.4 9.1E-07 3.1E-11 97.1 13.0 95 254-356 287-390 (433)
253 2okc_A Type I restriction enzy 98.4 4.7E-07 1.6E-11 99.6 9.3 116 232-356 158-308 (445)
254 2qfm_A Spermine synthase; sper 98.3 9.7E-07 3.3E-11 94.8 8.6 103 253-357 188-316 (364)
255 3pfg_A N-methyltransferase; N, 98.3 5.3E-07 1.8E-11 91.0 6.1 133 517-660 52-249 (263)
256 3e8s_A Putative SAM dependent 98.3 6.2E-07 2.1E-11 87.3 6.3 132 517-660 54-227 (227)
257 3tqs_A Ribosomal RNA small sub 98.3 1.6E-06 5.6E-11 88.8 8.8 84 231-326 15-105 (255)
258 2xvm_A Tellurite resistance pr 98.3 3.7E-07 1.3E-11 87.3 3.7 116 517-645 34-171 (199)
259 3evf_A RNA-directed RNA polyme 98.2 1.8E-06 6E-11 89.3 8.1 103 254-358 75-187 (277)
260 3h2b_A SAM-dependent methyltra 98.2 8.7E-07 3E-11 85.6 5.5 131 517-657 43-192 (203)
261 3ldu_A Putative methylase; str 98.2 4.2E-06 1.4E-10 90.6 11.1 104 254-358 196-347 (385)
262 3k0b_A Predicted N6-adenine-sp 98.2 5.8E-06 2E-10 89.8 12.0 104 254-358 202-353 (393)
263 1kpg_A CFA synthase;, cyclopro 98.2 1.1E-06 3.7E-11 89.8 5.9 98 517-622 66-168 (287)
264 3ocj_A Putative exported prote 98.2 8.8E-07 3E-11 91.9 4.8 137 517-660 120-304 (305)
265 2b9e_A NOL1/NOP2/SUN domain fa 98.2 8.8E-06 3E-10 85.6 12.1 105 254-359 103-238 (309)
266 3jwg_A HEN1, methyltransferase 98.2 2.7E-06 9.2E-11 83.2 7.3 138 516-661 30-211 (219)
267 2efj_A 3,7-dimethylxanthine me 98.2 4.3E-06 1.5E-10 90.6 9.5 106 254-360 53-230 (384)
268 4hg2_A Methyltransferase type 98.2 7.1E-07 2.4E-11 91.4 3.2 93 517-621 41-134 (257)
269 3bxo_A N,N-dimethyltransferase 98.1 1.7E-06 5.7E-11 85.3 5.7 117 479-622 21-141 (239)
270 3ldg_A Putative uncharacterize 98.1 1.2E-05 4E-10 87.2 12.8 104 254-358 195-346 (384)
271 3b5i_A S-adenosyl-L-methionine 98.1 6.9E-06 2.4E-10 88.7 10.7 107 253-360 52-230 (374)
272 3dlc_A Putative S-adenosyl-L-m 98.1 2.6E-06 8.8E-11 82.4 6.6 129 518-659 46-213 (219)
273 3fut_A Dimethyladenosine trans 98.1 5.7E-06 2E-10 85.6 9.5 84 231-326 33-119 (271)
274 3i9f_A Putative type 11 methyl 98.1 2.1E-06 7.2E-11 80.5 5.7 127 516-660 18-160 (170)
275 3bt7_A TRNA (uracil-5-)-methyl 98.1 4.5E-06 1.5E-10 89.6 8.5 94 255-358 215-329 (369)
276 2p7i_A Hypothetical protein; p 98.1 9.6E-07 3.3E-11 87.0 2.8 92 518-622 45-141 (250)
277 3dh0_A SAM dependent methyltra 98.1 1.7E-06 5.8E-11 84.4 4.3 134 517-660 39-193 (219)
278 3dli_A Methyltransferase; PSI- 98.1 9.5E-07 3.2E-11 88.0 2.4 116 517-644 43-181 (240)
279 2zfu_A Nucleomethylin, cerebra 98.1 9.4E-06 3.2E-10 79.1 9.4 120 517-660 69-191 (215)
280 3uzu_A Ribosomal RNA small sub 98.1 4.6E-06 1.6E-10 86.6 7.5 77 231-315 28-106 (279)
281 1m6e_X S-adenosyl-L-methionnin 98.1 3.7E-06 1.3E-10 90.4 6.6 107 253-360 51-214 (359)
282 3dmg_A Probable ribosomal RNA 98.1 6.6E-05 2.2E-09 81.2 16.5 93 255-356 47-140 (381)
283 3hem_A Cyclopropane-fatty-acyl 98.1 2.7E-06 9.2E-11 87.9 5.2 98 517-622 74-183 (302)
284 1y8c_A S-adenosylmethionine-de 98.0 4.9E-06 1.7E-10 82.0 6.7 94 517-620 39-140 (246)
285 3grz_A L11 mtase, ribosomal pr 98.0 1.2E-05 4E-10 78.0 9.2 112 517-644 62-182 (205)
286 4gqb_A Protein arginine N-meth 98.0 2E-05 6.9E-10 90.4 12.1 120 231-352 335-464 (637)
287 3evz_A Methyltransferase; NYSG 98.0 1.1E-05 3.7E-10 79.5 8.6 138 517-660 57-220 (230)
288 3ftd_A Dimethyladenosine trans 98.0 2.3E-05 7.9E-10 79.8 11.3 85 231-325 17-103 (249)
289 1xtp_A LMAJ004091AAA; SGPP, st 98.0 1.3E-06 4.6E-11 86.9 1.9 122 516-646 94-237 (254)
290 2dul_A N(2),N(2)-dimethylguano 98.0 1.1E-05 3.8E-10 87.2 9.0 96 254-355 48-164 (378)
291 4dzr_A Protein-(glutamine-N5) 98.0 5.8E-06 2E-10 79.6 6.0 142 516-660 31-205 (215)
292 3ofk_A Nodulation protein S; N 98.0 2.9E-06 9.8E-11 82.7 3.8 98 515-622 51-154 (216)
293 1xxl_A YCGJ protein; structura 98.0 1.8E-06 6.2E-11 86.1 2.4 95 516-622 22-124 (239)
294 4e2x_A TCAB9; kijanose, tetron 98.0 2.9E-06 9.9E-11 91.8 4.1 153 467-645 74-251 (416)
295 3lcc_A Putative methyl chlorid 98.0 3.7E-06 1.3E-10 83.3 4.5 120 517-647 68-207 (235)
296 3hnr_A Probable methyltransfer 98.0 2.1E-05 7.1E-10 76.6 9.8 132 516-660 46-212 (220)
297 1nkv_A Hypothetical protein YJ 98.0 2.2E-06 7.7E-11 85.6 2.9 94 517-622 38-140 (256)
298 2ar0_A M.ecoki, type I restric 98.0 7.6E-06 2.6E-10 92.5 7.4 103 254-356 170-313 (541)
299 2fk8_A Methoxy mycolic acid sy 98.0 5.2E-06 1.8E-10 86.2 5.6 98 517-622 92-194 (318)
300 3hp7_A Hemolysin, putative; st 98.0 1.9E-05 6.6E-10 82.5 9.7 114 517-645 87-230 (291)
301 3hm2_A Precorrin-6Y C5,15-meth 98.0 1.4E-05 4.6E-10 75.1 7.8 115 517-644 27-150 (178)
302 2pxx_A Uncharacterized protein 98.0 2.8E-06 9.7E-11 82.0 3.1 137 517-659 44-197 (215)
303 1vl5_A Unknown conserved prote 97.9 3.5E-06 1.2E-10 84.8 3.7 95 516-622 38-140 (260)
304 2o57_A Putative sarcosine dime 97.9 2.7E-06 9.2E-11 87.3 2.8 95 517-622 84-187 (297)
305 3cgg_A SAM-dependent methyltra 97.9 6.9E-06 2.4E-10 77.7 5.5 134 517-660 48-195 (195)
306 3axs_A Probable N(2),N(2)-dime 97.9 1.7E-05 5.7E-10 86.3 8.8 97 254-355 53-158 (392)
307 3f4k_A Putative methyltransfer 97.9 3.6E-06 1.2E-10 84.1 3.2 116 517-644 48-193 (257)
308 3m70_A Tellurite resistance pr 97.9 5.2E-06 1.8E-10 84.8 4.4 116 517-645 122-258 (286)
309 3q87_B N6 adenine specific DNA 97.9 2.1E-05 7.2E-10 74.7 8.3 130 518-658 26-160 (170)
310 3mgg_A Methyltransferase; NYSG 97.9 3.3E-06 1.1E-10 85.6 2.7 96 517-622 39-142 (276)
311 1l3i_A Precorrin-6Y methyltran 97.9 7.9E-06 2.7E-10 77.1 5.0 113 517-644 35-157 (192)
312 3sm3_A SAM-dependent methyltra 97.9 2.3E-06 7.9E-11 83.8 1.3 98 517-622 32-141 (235)
313 2i62_A Nicotinamide N-methyltr 97.9 7.8E-06 2.7E-10 81.8 5.0 125 516-646 57-238 (265)
314 3ege_A Putative methyltransfer 97.9 5.2E-06 1.8E-10 84.0 3.8 93 516-621 35-129 (261)
315 3e23_A Uncharacterized protein 97.9 3.8E-06 1.3E-10 81.7 2.6 118 517-645 45-180 (211)
316 3g5l_A Putative S-adenosylmeth 97.9 8.6E-06 2.9E-10 81.4 5.2 94 517-621 46-144 (253)
317 3kkz_A Uncharacterized protein 97.9 4.7E-06 1.6E-10 84.2 3.3 116 517-644 48-193 (267)
318 3l8d_A Methyltransferase; stru 97.9 5.5E-06 1.9E-10 81.8 3.7 116 517-644 55-197 (242)
319 3ccf_A Cyclopropane-fatty-acyl 97.9 1E-05 3.4E-10 82.5 5.6 92 517-621 59-153 (279)
320 4dcm_A Ribosomal RNA large sub 97.9 0.00017 6E-09 77.6 15.5 132 517-662 224-368 (375)
321 3bus_A REBM, methyltransferase 97.9 3.7E-06 1.2E-10 85.0 2.2 95 517-622 63-166 (273)
322 2b3t_A Protein methyltransfera 97.9 1E-05 3.4E-10 82.7 5.5 138 517-659 111-275 (276)
323 3d2l_A SAM-dependent methyltra 97.9 9E-06 3.1E-10 80.2 4.9 93 517-620 35-135 (243)
324 3cc8_A Putative methyltransfer 97.9 7.6E-06 2.6E-10 79.6 4.3 94 516-622 33-130 (230)
325 3gu3_A Methyltransferase; alph 97.9 4.6E-06 1.6E-10 85.5 2.8 99 516-624 23-128 (284)
326 1dus_A MJ0882; hypothetical pr 97.9 5.3E-06 1.8E-10 78.4 3.1 116 517-644 54-180 (194)
327 3ujc_A Phosphoethanolamine N-m 97.9 2.6E-06 8.9E-11 85.2 0.8 97 517-622 57-159 (266)
328 3thr_A Glycine N-methyltransfe 97.9 3.8E-06 1.3E-10 85.9 1.9 100 517-623 59-176 (293)
329 1jsx_A Glucose-inhibited divis 97.9 5.6E-06 1.9E-10 80.1 3.0 127 517-660 67-205 (207)
330 2r6z_A UPF0341 protein in RSP 97.8 2.2E-05 7.7E-10 80.4 7.5 70 254-326 84-170 (258)
331 2aot_A HMT, histamine N-methyl 97.8 1.2E-05 4E-10 82.8 5.2 96 517-621 54-171 (292)
332 3eey_A Putative rRNA methylase 97.8 1.7E-05 5.9E-10 76.1 6.0 138 518-661 25-189 (197)
333 2yqz_A Hypothetical protein TT 97.8 5E-06 1.7E-10 83.1 2.3 93 517-621 41-140 (263)
334 1m6y_A S-adenosyl-methyltransf 97.8 2E-05 6.7E-10 82.7 6.9 73 231-312 12-88 (301)
335 3ou2_A SAM-dependent methyltra 97.8 3.4E-06 1.2E-10 81.7 0.7 94 518-622 49-146 (218)
336 4htf_A S-adenosylmethionine-de 97.8 4.4E-06 1.5E-10 85.3 1.6 94 517-622 70-173 (285)
337 3mti_A RRNA methylase; SAM-dep 97.8 1.3E-05 4.4E-10 76.2 4.7 138 517-659 24-183 (185)
338 2ex4_A Adrenal gland protein A 97.8 8.9E-06 3E-10 80.9 3.3 123 516-647 80-225 (241)
339 3jwh_A HEN1; methyltransferase 97.8 2.1E-05 7.2E-10 76.8 5.8 100 517-624 31-143 (217)
340 3opn_A Putative hemolysin; str 97.8 6E-05 2E-09 75.8 9.2 128 517-659 39-201 (232)
341 3ntv_A MW1564 protein; rossman 97.8 7.1E-06 2.4E-10 81.8 2.2 93 516-620 72-174 (232)
342 2avn_A Ubiquinone/menaquinone 97.8 1.7E-05 5.8E-10 80.0 4.9 96 517-623 56-153 (260)
343 3dp7_A SAM-dependent methyltra 97.8 1.6E-05 5.3E-10 84.9 4.9 101 515-622 179-287 (363)
344 2frn_A Hypothetical protein PH 97.8 2.2E-05 7.4E-10 80.9 5.7 112 517-644 127-254 (278)
345 1qyr_A KSGA, high level kasuga 97.8 2.3E-05 8E-10 80.0 5.9 84 232-326 8-99 (252)
346 2gs9_A Hypothetical protein TT 97.8 9.6E-06 3.3E-10 78.6 2.9 92 517-622 38-132 (211)
347 3i53_A O-methyltransferase; CO 97.7 2.3E-05 7.8E-10 82.2 5.8 136 512-659 166-331 (332)
348 3orh_A Guanidinoacetate N-meth 97.7 8.8E-06 3E-10 81.6 2.5 98 517-621 62-169 (236)
349 3bkw_A MLL3908 protein, S-aden 97.7 1.5E-05 5.2E-10 78.5 3.9 95 517-622 45-144 (243)
350 1ve3_A Hypothetical protein PH 97.7 1.9E-05 6.6E-10 77.0 4.4 97 517-623 40-143 (227)
351 3m33_A Uncharacterized protein 97.7 2E-05 6.9E-10 77.9 4.6 110 517-643 50-163 (226)
352 3dtn_A Putative methyltransfer 97.7 7.1E-06 2.4E-10 80.9 1.2 97 517-622 46-148 (234)
353 3e05_A Precorrin-6Y C5,15-meth 97.7 3.9E-05 1.3E-09 74.3 6.4 115 517-644 42-165 (204)
354 3g5t_A Trans-aconitate 3-methy 97.7 1.2E-05 4.1E-10 82.8 3.0 94 516-620 37-147 (299)
355 3v97_A Ribosomal RNA large sub 97.7 0.00012 4E-09 85.3 11.4 105 254-358 191-350 (703)
356 2p35_A Trans-aconitate 2-methy 97.7 2.5E-05 8.4E-10 77.9 4.9 93 517-622 35-132 (259)
357 3gcz_A Polyprotein; flavivirus 97.7 2.6E-05 8.8E-10 80.7 5.1 103 254-358 91-204 (282)
358 3o4f_A Spermidine synthase; am 97.7 0.00036 1.2E-08 72.9 13.8 103 253-357 83-200 (294)
359 1nt2_A Fibrillarin-like PRE-rR 97.7 3.4E-05 1.2E-09 76.1 5.8 114 518-644 60-192 (210)
360 3khk_A Type I restriction-modi 97.7 0.00011 3.9E-09 83.0 10.7 103 255-357 246-397 (544)
361 1xdz_A Methyltransferase GIDB; 97.7 2.8E-05 9.7E-10 77.6 5.0 132 516-660 71-219 (240)
362 3vc1_A Geranyl diphosphate 2-C 97.7 1.1E-05 3.9E-10 83.7 2.0 94 516-622 118-221 (312)
363 3lst_A CALO1 methyltransferase 97.7 6E-05 2.1E-09 79.7 7.5 134 513-658 182-346 (348)
364 1vlm_A SAM-dependent methyltra 97.7 1.6E-05 5.3E-10 78.1 2.7 113 517-645 49-186 (219)
365 4fsd_A Arsenic methyltransfera 97.7 1.5E-05 5E-10 85.8 2.7 116 517-642 85-246 (383)
366 1zx0_A Guanidinoacetate N-meth 97.7 1.4E-05 4.7E-10 79.5 2.3 98 517-622 62-170 (236)
367 3tfw_A Putative O-methyltransf 97.6 3.9E-05 1.3E-09 77.4 5.6 134 516-660 64-225 (248)
368 3duw_A OMT, O-methyltransferas 97.6 1.6E-05 5.5E-10 78.0 2.5 132 516-659 59-221 (223)
369 2plw_A Ribosomal RNA methyltra 97.6 3.3E-05 1.1E-09 74.2 4.7 132 517-659 24-195 (201)
370 1ej0_A FTSJ; methyltransferase 97.6 6.5E-05 2.2E-09 69.3 6.5 129 517-659 24-177 (180)
371 3ua3_A Protein arginine N-meth 97.6 5E-05 1.7E-09 87.5 6.7 99 254-352 410-531 (745)
372 1yzh_A TRNA (guanine-N(7)-)-me 97.6 6.5E-05 2.2E-09 73.5 6.3 123 517-644 43-179 (214)
373 2kw5_A SLR1183 protein; struct 97.6 3.1E-05 1.1E-09 74.5 3.8 113 518-644 32-168 (202)
374 3g2m_A PCZA361.24; SAM-depende 97.6 9.1E-06 3.1E-10 83.7 0.0 95 518-622 85-190 (299)
375 4gek_A TRNA (CMO5U34)-methyltr 97.6 1.6E-05 5.4E-10 81.5 1.4 99 518-622 73-178 (261)
376 1qzz_A RDMB, aclacinomycin-10- 97.6 5.9E-05 2E-09 80.0 5.8 136 514-660 181-356 (374)
377 2yxd_A Probable cobalt-precorr 97.6 6.5E-05 2.2E-09 70.3 5.3 110 517-645 37-155 (183)
378 3lkd_A Type I restriction-modi 97.5 0.00046 1.6E-08 77.9 13.0 123 231-357 203-360 (542)
379 3bgv_A MRNA CAP guanine-N7 met 97.5 2E-05 6.8E-10 81.8 1.7 101 516-623 35-156 (313)
380 1ri5_A MRNA capping enzyme; me 97.5 2.1E-05 7E-10 80.1 1.7 100 517-623 66-175 (298)
381 2g72_A Phenylethanolamine N-me 97.5 3.3E-05 1.1E-09 79.1 3.1 85 578-664 173-283 (289)
382 3c3p_A Methyltransferase; NP_9 97.5 2E-05 6.7E-10 76.8 1.2 93 517-622 58-160 (210)
383 2fca_A TRNA (guanine-N(7)-)-me 97.5 0.00013 4.4E-09 71.8 7.1 122 517-643 40-175 (213)
384 4auk_A Ribosomal RNA large sub 97.5 0.00078 2.7E-08 72.5 13.6 92 253-354 211-305 (375)
385 2p8j_A S-adenosylmethionine-de 97.5 2.9E-05 9.8E-10 74.9 2.3 97 517-622 25-128 (209)
386 3ll7_A Putative methyltransfer 97.5 6.1E-05 2.1E-09 82.3 4.9 68 254-324 94-170 (410)
387 3r3h_A O-methyltransferase, SA 97.5 4.4E-05 1.5E-09 77.0 3.5 137 516-665 61-225 (242)
388 2vdw_A Vaccinia virus capping 97.5 3.3E-05 1.1E-09 80.7 2.6 98 517-623 50-170 (302)
389 3gwz_A MMCR; methyltransferase 97.5 8.7E-05 3E-09 79.3 5.8 137 513-659 200-368 (369)
390 1wzn_A SAM-dependent methyltra 97.5 4.4E-05 1.5E-09 76.0 3.1 95 517-621 43-144 (252)
391 3lpm_A Putative methyltransfer 97.5 6.3E-05 2.2E-09 76.1 4.2 124 517-644 51-198 (259)
392 2nxc_A L11 mtase, ribosomal pr 97.5 4E-05 1.4E-09 77.7 2.7 112 517-644 122-241 (254)
393 3gdh_A Trimethylguanosine synt 97.5 1.8E-05 6.2E-10 78.6 0.2 93 517-622 80-181 (241)
394 3q7e_A Protein arginine N-meth 97.5 4.4E-05 1.5E-09 81.2 3.2 96 517-620 68-171 (349)
395 1x19_A CRTF-related protein; m 97.5 0.00012 4.2E-09 77.5 6.6 98 515-622 190-295 (359)
396 3g07_A 7SK snRNA methylphospha 97.5 2.5E-05 8.6E-10 80.7 1.2 47 576-622 174-220 (292)
397 3tr6_A O-methyltransferase; ce 97.5 3.4E-05 1.2E-09 75.6 2.1 129 517-660 66-224 (225)
398 3u81_A Catechol O-methyltransf 97.4 2.5E-05 8.7E-10 76.9 1.0 131 516-659 59-212 (221)
399 2ip2_A Probable phenazine-spec 97.4 7.3E-05 2.5E-09 78.2 4.6 132 517-659 169-333 (334)
400 1tw3_A COMT, carminomycin 4-O- 97.4 0.00015 5.3E-09 76.5 7.1 136 515-660 183-356 (360)
401 3r0q_C Probable protein argini 97.4 0.00013 4.5E-09 78.3 6.7 97 517-621 65-168 (376)
402 2oyr_A UPF0341 protein YHIQ; a 97.4 0.00011 3.6E-09 75.6 5.5 90 255-349 90-194 (258)
403 3s1s_A Restriction endonucleas 97.4 0.00045 1.5E-08 80.8 11.3 104 254-357 322-467 (878)
404 3dou_A Ribosomal RNA large sub 97.4 8.6E-05 2.9E-09 72.2 4.6 134 517-659 27-180 (191)
405 3mcz_A O-methyltransferase; ad 97.4 3.4E-05 1.2E-09 81.3 1.8 135 516-660 180-349 (352)
406 3njr_A Precorrin-6Y methylase; 97.4 0.00023 7.9E-09 69.6 7.4 111 517-644 57-177 (204)
407 2oxt_A Nucleoside-2'-O-methylt 97.4 0.00017 5.9E-09 74.1 6.8 135 517-658 76-226 (265)
408 3eld_A Methyltransferase; flav 97.4 0.00045 1.5E-08 72.0 9.8 103 253-358 81-194 (300)
409 2bm8_A Cephalosporin hydroxyla 97.4 9.8E-05 3.4E-09 74.1 4.8 114 517-641 83-213 (236)
410 1pjz_A Thiopurine S-methyltran 97.4 4.1E-05 1.4E-09 74.8 1.7 120 517-646 24-175 (203)
411 2qy6_A UPF0209 protein YFCK; s 97.4 0.00012 4.2E-09 75.0 5.4 101 253-353 60-211 (257)
412 3cvo_A Methyltransferase-like 97.4 0.00096 3.3E-08 66.0 11.6 92 254-355 31-154 (202)
413 2a14_A Indolethylamine N-methy 97.4 4E-05 1.4E-09 77.8 1.6 65 578-644 155-235 (263)
414 3ggd_A SAM-dependent methyltra 97.4 3.5E-05 1.2E-09 76.5 1.0 97 517-622 58-163 (245)
415 2gb4_A Thiopurine S-methyltran 97.4 7E-05 2.4E-09 76.2 3.2 120 517-646 70-226 (252)
416 2r3s_A Uncharacterized protein 97.4 0.00016 5.3E-09 75.4 5.9 136 515-660 165-335 (335)
417 3mb5_A SAM-dependent methyltra 97.4 9.6E-05 3.3E-09 73.9 4.0 106 517-638 95-211 (255)
418 3dxy_A TRNA (guanine-N(7)-)-me 97.3 0.00013 4.4E-09 72.4 4.8 115 516-636 35-165 (218)
419 2p41_A Type II methyltransfera 97.3 0.00022 7.5E-09 74.8 6.0 103 517-621 84-190 (305)
420 3g89_A Ribosomal RNA small sub 97.3 0.00012 4E-09 74.3 3.8 131 517-660 82-229 (249)
421 3sso_A Methyltransferase; macr 97.3 6.7E-05 2.3E-09 81.7 1.9 130 483-642 201-362 (419)
422 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00038 1.3E-08 65.6 6.8 83 254-356 36-122 (153)
423 1g6q_1 HnRNP arginine N-methyl 97.3 0.00015 5.1E-09 76.4 4.5 95 517-619 40-142 (328)
424 1vbf_A 231AA long hypothetical 97.3 6.2E-05 2.1E-09 74.1 1.3 89 517-623 72-166 (231)
425 3fpf_A Mtnas, putative unchara 97.3 9.5E-05 3.3E-09 77.4 2.7 129 517-660 124-264 (298)
426 3dr5_A Putative O-methyltransf 97.2 7.4E-05 2.5E-09 74.4 1.7 134 518-663 59-216 (221)
427 3cbg_A O-methyltransferase; cy 97.2 6.2E-05 2.1E-09 75.0 1.0 128 517-660 74-232 (232)
428 3p9n_A Possible methyltransfer 97.2 6.4E-05 2.2E-09 71.9 0.9 98 517-623 46-154 (189)
429 4df3_A Fibrillarin-like rRNA/T 97.2 0.00048 1.6E-08 69.7 7.4 104 508-621 72-181 (233)
430 1ws6_A Methyltransferase; stru 97.2 3.3E-05 1.1E-09 71.7 -1.3 94 517-623 43-148 (171)
431 2vdv_E TRNA (guanine-N(7)-)-me 97.2 0.00026 9E-09 70.9 5.2 118 517-639 51-191 (246)
432 3ckk_A TRNA (guanine-N(7)-)-me 97.2 0.00024 8.2E-09 71.4 4.9 123 516-642 47-190 (235)
433 3bkx_A SAM-dependent methyltra 97.2 0.00032 1.1E-08 70.6 5.8 100 517-622 45-159 (275)
434 2ipx_A RRNA 2'-O-methyltransfe 97.2 0.00024 8.2E-09 70.3 4.7 135 517-659 79-231 (233)
435 2gpy_A O-methyltransferase; st 97.2 5.7E-05 1.9E-09 74.8 0.1 94 517-622 56-160 (233)
436 2ozv_A Hypothetical protein AT 97.2 0.00079 2.7E-08 68.4 8.5 120 517-640 38-187 (260)
437 3iv6_A Putative Zn-dependent a 97.2 0.00015 5E-09 74.6 2.9 95 517-621 47-147 (261)
438 1g8a_A Fibrillarin-like PRE-rR 97.2 0.0003 1E-08 69.1 5.1 130 517-660 75-227 (227)
439 1fp1_D Isoliquiritigenin 2'-O- 97.2 8.9E-05 3E-09 79.1 1.3 97 515-622 209-306 (372)
440 3p2e_A 16S rRNA methylase; met 97.2 8.1E-05 2.8E-09 74.3 0.8 100 517-620 26-137 (225)
441 2esr_A Methyltransferase; stru 97.1 5.3E-05 1.8E-09 71.4 -0.5 96 517-623 33-139 (177)
442 2pwy_A TRNA (adenine-N(1)-)-me 97.1 0.00033 1.1E-08 69.8 4.9 108 517-640 98-217 (258)
443 2hnk_A SAM-dependent O-methylt 97.1 8.1E-05 2.8E-09 74.1 0.4 130 517-663 62-234 (239)
444 3lbf_A Protein-L-isoaspartate 97.1 0.00013 4.3E-09 70.8 1.7 90 517-624 79-176 (210)
445 2nyu_A Putative ribosomal RNA 97.1 0.00024 8.2E-09 67.7 3.5 97 517-622 24-145 (196)
446 1sui_A Caffeoyl-COA O-methyltr 97.1 0.00012 4.1E-09 74.0 1.2 96 516-622 80-190 (247)
447 2fyt_A Protein arginine N-meth 97.1 0.0003 1E-08 74.5 4.3 95 517-619 66-168 (340)
448 3c3y_A Pfomt, O-methyltransfer 97.1 0.00011 3.8E-09 73.6 0.9 96 516-622 71-181 (237)
449 2avd_A Catechol-O-methyltransf 97.1 7.1E-05 2.4E-09 73.5 -0.5 127 517-659 71-228 (229)
450 2y1w_A Histone-arginine methyl 97.1 0.00033 1.1E-08 74.3 4.6 96 517-621 52-154 (348)
451 2yvl_A TRMI protein, hypotheti 97.1 0.00047 1.6E-08 68.2 5.4 105 517-640 93-208 (248)
452 3reo_A (ISO)eugenol O-methyltr 97.0 0.00028 9.4E-09 75.5 3.7 97 513-622 201-300 (368)
453 1yb2_A Hypothetical protein TA 97.0 0.00048 1.6E-08 70.2 5.3 110 517-641 112-231 (275)
454 2wa2_A Non-structural protein 97.0 0.00075 2.6E-08 69.7 6.2 101 517-621 84-192 (276)
455 3c6k_A Spermine synthase; sper 97.0 0.0014 4.7E-08 70.7 8.3 102 253-356 205-332 (381)
456 1i1n_A Protein-L-isoaspartate 96.9 0.00021 7.3E-09 70.0 1.5 90 517-622 79-182 (226)
457 2ift_A Putative methylase HI07 96.9 0.00028 9.7E-09 68.6 2.2 98 517-625 55-166 (201)
458 1nv8_A HEMK protein; class I a 96.9 0.00048 1.6E-08 71.2 3.9 132 517-660 125-282 (284)
459 1p91_A Ribosomal RNA large sub 96.9 0.00032 1.1E-08 70.6 2.5 89 517-622 87-178 (269)
460 3mq2_A 16S rRNA methyltransfer 96.9 0.0006 2E-08 66.4 4.2 123 517-644 29-181 (218)
461 1o54_A SAM-dependent O-methylt 96.9 0.0013 4.5E-08 66.8 6.9 109 518-641 115-233 (277)
462 3id6_C Fibrillarin-like rRNA/T 96.9 0.00053 1.8E-08 69.2 3.8 96 517-621 78-180 (232)
463 2wk1_A NOVP; transferase, O-me 96.9 0.0062 2.1E-07 63.2 11.8 100 254-356 107-245 (282)
464 3lkz_A Non-structural protein 96.8 0.011 3.7E-07 61.6 13.2 102 254-360 95-209 (321)
465 3p9c_A Caffeic acid O-methyltr 96.8 0.00039 1.3E-08 74.3 2.5 96 514-622 200-298 (364)
466 2yxe_A Protein-L-isoaspartate 96.8 0.00023 8E-09 69.1 0.3 92 517-624 79-179 (215)
467 1fp2_A Isoflavone O-methyltran 96.8 0.00036 1.2E-08 73.7 1.8 95 515-622 188-288 (352)
468 2pjd_A Ribosomal RNA small sub 96.8 0.00029 1E-08 74.5 1.1 100 518-622 199-303 (343)
469 3a27_A TYW2, uncharacterized p 96.7 0.001 3.5E-08 68.1 4.8 111 517-643 121-247 (272)
470 4fzv_A Putative methyltransfer 96.7 0.0045 1.5E-07 66.4 9.6 107 253-360 148-289 (359)
471 2fhp_A Methylase, putative; al 96.7 0.00031 1.1E-08 66.2 0.2 96 517-623 46-155 (187)
472 1o9g_A RRNA methyltransferase; 96.6 0.00047 1.6E-08 69.0 1.5 106 517-624 53-216 (250)
473 1r18_A Protein-L-isoaspartate( 96.6 0.00049 1.7E-08 67.8 1.5 92 518-622 87-194 (227)
474 1zg3_A Isoflavanone 4'-O-methy 96.6 0.00048 1.7E-08 72.9 1.4 95 515-622 193-293 (358)
475 2qe6_A Uncharacterized protein 96.6 0.0011 3.8E-08 68.0 3.9 99 515-622 77-196 (274)
476 4a6d_A Hydroxyindole O-methylt 96.6 0.0015 5.3E-08 69.3 5.1 139 512-661 176-347 (353)
477 2fpo_A Methylase YHHF; structu 96.5 0.00069 2.4E-08 65.9 1.8 97 517-624 56-162 (202)
478 1fbn_A MJ fibrillarin homologu 96.5 0.0019 6.6E-08 63.7 5.1 130 517-660 76-228 (230)
479 1i9g_A Hypothetical protein RV 96.5 0.0022 7.6E-08 64.8 5.5 108 518-640 102-223 (280)
480 2px2_A Genome polyprotein [con 96.5 0.0085 2.9E-07 61.3 9.6 100 253-358 73-186 (269)
481 2xyq_A Putative 2'-O-methyl tr 96.5 0.0026 8.7E-08 66.3 5.8 131 517-659 65-210 (290)
482 2pbf_A Protein-L-isoaspartate 96.4 0.00063 2.1E-08 66.7 0.9 92 517-622 82-193 (227)
483 1jg1_A PIMT;, protein-L-isoasp 96.4 0.00059 2E-08 67.6 0.4 90 517-623 93-190 (235)
484 1dl5_A Protein-L-isoaspartate 96.4 0.0007 2.4E-08 70.7 0.8 93 517-624 77-177 (317)
485 2b25_A Hypothetical protein; s 96.4 0.0037 1.3E-07 65.5 6.3 93 517-623 107-220 (336)
486 1wy7_A Hypothetical protein PH 96.4 0.0049 1.7E-07 59.2 6.7 116 517-644 51-172 (207)
487 1ixk_A Methyltransferase; open 96.3 0.0018 6.2E-08 67.8 3.6 121 517-640 120-268 (315)
488 3b3j_A Histone-arginine methyl 96.3 0.0012 4.1E-08 73.4 1.8 94 517-620 160-261 (480)
489 1wg8_A Predicted S-adenosylmet 96.2 0.012 4E-07 61.1 8.7 55 231-296 8-62 (285)
490 1inl_A Spermidine synthase; be 96.2 0.004 1.4E-07 64.6 5.3 141 517-661 92-253 (296)
491 3htx_A HEN1; HEN1, small RNA m 96.2 0.0018 6.3E-08 76.0 2.9 99 517-622 723-834 (950)
492 3bzb_A Uncharacterized protein 96.1 0.0018 6.3E-08 66.4 2.3 94 517-620 81-203 (281)
493 3p8z_A Mtase, non-structural p 96.1 0.055 1.9E-06 54.8 12.8 101 254-360 79-191 (267)
494 2h00_A Methyltransferase 10 do 96.1 0.00091 3.1E-08 66.9 -0.2 101 517-620 67-190 (254)
495 3bwc_A Spermidine synthase; SA 96.0 0.0041 1.4E-07 64.7 4.3 139 517-660 97-258 (304)
496 1wxx_A TT1595, hypothetical pr 96.0 0.0026 9.1E-08 68.2 2.8 121 517-645 211-354 (382)
497 1iy9_A Spermidine synthase; ro 96.0 0.0099 3.4E-07 61.0 7.0 141 516-661 76-237 (275)
498 2igt_A SAM dependent methyltra 96.0 0.0021 7.2E-08 68.0 1.9 122 517-643 155-300 (332)
499 2vz8_A Fatty acid synthase; tr 96.0 0.0019 6.4E-08 84.8 1.8 103 254-357 1241-1350(2512)
500 3tma_A Methyltransferase; thum 95.9 0.0052 1.8E-07 65.0 4.8 134 516-659 204-353 (354)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.67 E-value=8e-17 Score=165.67 Aligned_cols=128 Identities=18% Similarity=0.254 Sum_probs=95.6
Q ss_pred ccccccccccch-hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc
Q 005959 219 SFRSASLIFDGV-EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 297 (667)
Q Consensus 219 ~F~~~~~~yd~~-~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er 297 (667)
.|.+.+..|+.. ..|...+.+.+....+ ...+|||||||+|.++..|++++ ..|+++|+|+.|++.|+++
T Consensus 10 ~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 10 HFTPVADAYRAFRPRYPRALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp ----------CCCCCCCHHHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc
Confidence 466666677543 4455555555543222 34689999999999999999885 4689999999999988653
Q ss_pred CCCceEEeecccCCCCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 298 GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 298 gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.++.+.+++++.+|+++++||+|+|..+ +||. +.+++++|+.|+|||||.|++.....
T Consensus 81 -~~v~~~~~~~e~~~~~~~sfD~v~~~~~-~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 -PRVTYAVAPAEDTGLPPASVDVAIAAQA-MHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp -TTEEEEECCTTCCCCCSSCEEEEEECSC-CTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CCceeehhhhhhhcccCCcccEEEEeee-hhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4678889999999999999999999988 6776 46789999999999999999987654
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=2.3e-14 Score=140.92 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=88.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. ++.+..+++..++++ ++||+|+|..+ +++.+
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~-l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYA-FHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESC-GGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcc-hhcCC
Confidence 3799999999999999999884 468999999999999988765 677888899999988 89999999988 55556
Q ss_pred CHHH--HHHHHHhcccCCeEEEEEeCCCCh
Q 005959 333 KDGI--LLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 333 d~~~--~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
+... +|+++.++|||||++++.++....
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 6655 999999999999999999876543
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.57 E-value=9.7e-15 Score=147.84 Aligned_cols=112 Identities=15% Similarity=0.269 Sum_probs=92.7
Q ss_pred HHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeeccc
Q 005959 235 HQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASK 309 (667)
Q Consensus 235 ~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~ 309 (667)
+.+.+.+...+ ..+|||||||+|.++..+++.+. .++++|+|+.|++.|+++ ++ ++.+..+|+.
T Consensus 27 ~~l~~~l~~~~--------~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 27 AKLMQIAALKG--------NEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp HHHHHHHTCCS--------CCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHhCCCC--------CCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH
Confidence 44555555433 47999999999999999998852 799999999999988765 33 4678889999
Q ss_pred CCCCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 310 QLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 310 ~Lpfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+|+++++||+|+|..+ +++.+++..+|.++.|+|||||+|++.++..
T Consensus 96 ~l~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 96 QMPFTDERFHIVTCRIA-AHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp CCCSCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hCCCCCCCEEEEEEhhh-hHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 99999999999999988 5566788899999999999999999987643
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.56 E-value=6.5e-15 Score=145.05 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=81.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----------------CCCceEEeecccCCCCCC-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------------GLPAMIGSFASKQLPYPS- 315 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-----------------gl~~~~~~~da~~Lpfpd- 315 (667)
..+|||+|||+|.++..|+++|. .|+|+|+|+.|++.|+++ ..++.+.++|+..+++++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 47999999999999999999864 699999999999999876 235778899999999876
Q ss_pred CCccEEEeccccccccc-CHHHHHHHHHhcccCCeEEEEEe
Q 005959 316 LSFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~~-d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
++||+|++..+++++.+ +...+++++.|+|||||++++..
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 89999999877554432 23569999999999999844443
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.55 E-value=1.6e-14 Score=141.93 Aligned_cols=135 Identities=19% Similarity=0.107 Sum_probs=102.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+.....++++|.++.+++.++++ ++ ++.+..+++..+++++++||+|++..+ +
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 116 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT-F 116 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC-G
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh-h
Confidence 37999999999999999998853346799999999999888765 33 477888899999999999999999988 5
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEee
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~ 389 (667)
++.++...+++++.++|||||++++.++................-..+..+.+..+|+.+.
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEE
Confidence 5557888999999999999999999986543311111111111234556666777777654
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=2.3e-14 Score=147.43 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=85.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC-CceeEEEEecCCHHHHHHHHHc----C--CCceEEeecccCCCCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g-~~~~sV~gvD~S~~ml~~A~er----g--l~~~~~~~da~~Lpfpd~sFDlV~~s~ 325 (667)
++.+|||||||+|.++..|+++. .....|+|+|+|+.|++.|+++ + .++.+.++|+..+|++ .||+|+++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeee
Confidence 45799999999999999998762 2346799999999999999875 2 3567888999988875 599999998
Q ss_pred cccccccCH--HHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 326 CGVDWDQKD--GILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 326 ~ll~~~~d~--~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
+ +|+.++. ..+|++++|+|||||.|++++.....
T Consensus 148 ~-l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 148 T-LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp C-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred e-eeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 8 5555433 46899999999999999999876543
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.54 E-value=5.9e-14 Score=139.73 Aligned_cols=132 Identities=20% Similarity=0.219 Sum_probs=102.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc--CCCceEEeecccCCCCCCCCccEEEecccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER--GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 331 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er--gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~ 331 (667)
..+|||||||+|.++..+++.+. .++++|+++.+++.++++ ..++.+..+++..+++++++||+|+|..+ +++.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINS-LEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESC-TTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcCh-Hhhc
Confidence 47999999999999999999853 689999999999999887 34667888999999999999999999988 5556
Q ss_pred cCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHH---------hhhhhhhhhhhccceEEee
Q 005959 332 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ---------KRWNFVRDFVENLCWELVS 389 (667)
Q Consensus 332 ~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~---------~~W~~ie~l~~~~~W~ll~ 389 (667)
+++..++.++.++|||||+++++++.............. ..-..+..+.+..+|+.+.
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 788899999999999999999998765432211110000 0112456667777777764
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.54 E-value=8.7e-14 Score=135.51 Aligned_cols=103 Identities=21% Similarity=0.242 Sum_probs=89.5
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+|||||||+|.++..+++. ....++++|+++.+++.|+++ ++ ++.+..+++..+++++++||+|+|..+ +
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l 121 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS-V 121 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC-G
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECch-H
Confidence 39999999999999999987 356899999999999988766 33 567888999999999999999999988 5
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
++.++...+++++.++|||||++++.++....
T Consensus 122 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 122 FFWEDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred hhccCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 55588889999999999999999999866543
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.54 E-value=3.9e-14 Score=140.51 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=88.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
+.+|||||||+|.++..+++.+. .++++|+|+.|++.|+++.. ++.+..+++..+ +++++||+|+|..+ +++.+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~-l~~~~ 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHV-LEHID 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESC-GGGCS
T ss_pred CCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhH-HHhhc
Confidence 46899999999999999998864 58999999999999998755 677888888887 57789999999988 55567
Q ss_pred CHHHHHHHHH-hcccCCeEEEEEeCCCCh
Q 005959 333 KDGILLLEVD-RVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 333 d~~~~L~Ei~-RvLKPGG~Lvis~p~~~~ 360 (667)
++..+|+++. |+|||||+++++++....
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 8899999999 999999999999986543
No 10
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=2.6e-14 Score=138.99 Aligned_cols=134 Identities=15% Similarity=0.086 Sum_probs=104.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccc-c
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-Q 332 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~-~ 332 (667)
..+|||||||+|.++..|++.+. .++++|+++.|++.++++..++.+..+++..+++++++||+|+|..++.|+. +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 37899999999999999999854 5899999999999999987788899999999999999999999998855554 3
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHH---HHhhhhhhhhhhhccceEEeec
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---NQKRWNFVRDFVENLCWELVSQ 390 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e---~~~~W~~ie~l~~~~~W~ll~~ 390 (667)
+...+|+++.++|||||+++++++.......+.... ....-..+..+.+..+|+.+..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 678999999999999999999987654311111000 0011244566666777776643
No 11
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.53 E-value=3.1e-14 Score=134.57 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=87.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccccC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d 333 (667)
..+|||||||+|.++..+++.+ ..++++|.++.+++.++++..++.+...+ +++++++||+|++..+ +++.++
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~-l~~~~~ 90 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS-FHDMDD 90 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC-STTCSC
T ss_pred CCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc-hhcccC
Confidence 4799999999999999999885 37999999999999999886677777766 7888999999999988 555578
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 334 DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 334 ~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
...+++++.++|||||++++.++...
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 88999999999999999999987654
No 12
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=3.5e-14 Score=144.53 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=94.6
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCC
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL 311 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L 311 (667)
.+.+.+.+.+... ...+|||||||+|.++..+++.+ ..|+++|+|+.|++.++++. ++.+..+|++.+
T Consensus 21 ~~~~~l~~~~~~~--------~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~ 88 (261)
T 3ege_A 21 RIVNAIINLLNLP--------KGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHHCCC--------TTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTSC
T ss_pred HHHHHHHHHhCCC--------CCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhhC
Confidence 4445555555433 34899999999999999999864 56999999999999887765 788889999999
Q ss_pred CCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 312 PYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 312 pfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
|+++++||+|+|..+ +++.++...+++++.|+|| ||++++.++..
T Consensus 89 ~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 89 ALPDKSVDGVISILA-IHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp CSCTTCBSEEEEESC-GGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCCCCCEeEEEEcch-HhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 999999999999988 5555888999999999999 99998888754
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.51 E-value=4.3e-14 Score=142.14 Aligned_cols=115 Identities=16% Similarity=0.160 Sum_probs=93.1
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEE
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 304 (667)
....+.+.+.+...+ ..+|||||||+|.++..+++.. ...++++|+|+.|++.|+++ ++ ++.+.
T Consensus 22 ~~~~~~l~~~~~~~~--------~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 22 EEKYATLGRVLRMKP--------GTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHHHHHHTCCCT--------TCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCC--------CCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 444555555554433 3799999999999999999873 34689999999999888754 43 47788
Q ss_pred eecccCCCCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 305 SFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 305 ~~da~~Lpfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.+++..+++ +++||+|+|..+ +++.++...+|+++.|+|||||++++.++.
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~-~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGA-TWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESC-GGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred ECChHhCCc-CCCCCEEEECCC-hHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 899999988 789999999888 455567889999999999999999998763
No 14
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.51 E-value=1.1e-13 Score=135.20 Aligned_cols=101 Identities=25% Similarity=0.317 Sum_probs=88.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
+..+|||||||+|.++..+ +. ..++++|+++.|++.++++...+.+..+++..+|+++++||+|++..+ +++.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTT-LEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESC-TTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcCh-hhhcC
Confidence 4579999999999999888 32 268999999999999998866678888899999999999999999988 55667
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
++..+++++.++|||||.++++++...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 888999999999999999999998654
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=5.5e-14 Score=141.54 Aligned_cols=103 Identities=14% Similarity=0.183 Sum_probs=90.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--CCceEEeecccCCCCCCCCccEEEeccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~ 330 (667)
...+|||||||+|.++..+++.+.. .++++|+++.+++.|+++. ..+.+..+++..+++++++||+|+|..+ +++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA-LHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC-GGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh-hhh
Confidence 4589999999999999999998642 7999999999999998874 4677888999999999999999999987 555
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 331 DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 331 ~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.++...+|+++.++|||||.++++++.+
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 6888999999999999999999987753
No 16
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.51 E-value=3.8e-14 Score=142.64 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=90.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
+..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++. .++.+..+|+..+|+++++||+|++..+++|
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 45799999999999999999872 357999999999999999875 4577888999999999999999999988444
Q ss_pred cc-cCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 330 WD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 330 ~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+. ++...+|+++.++|||||++++.++...
T Consensus 133 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred cChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 32 6677899999999999999999987543
No 17
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.50 E-value=8.3e-14 Score=141.57 Aligned_cols=103 Identities=26% Similarity=0.416 Sum_probs=88.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.. ...++++|+|+.+++.++++ ++ .+.+..+++..+|+++++||+|++..+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 34799999999999999998863 35799999999999888765 43 467888899999999999999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++.++...+|+++.++|||||++++.++..
T Consensus 139 -l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 139 -LHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp -TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred -hhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 5556778899999999999999999998653
No 18
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1e-13 Score=139.40 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=90.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..+++.. +...++++|+|+.|++.++++..++.+..+|+..++ ++++||+|+|..+ +++.+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~~~~ 109 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAV-FQWVP 109 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESC-GGGST
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCc-hhhCC
Confidence 45789999999999999998872 234689999999999999988767888889999988 7889999999988 66778
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+...+|+++.++|||||+++++++..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 88999999999999999999998754
No 19
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=1e-13 Score=141.05 Aligned_cols=101 Identities=21% Similarity=0.200 Sum_probs=87.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
++.+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++ ++ .+.+..+|+..+|+++++||+|+|..+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 45799999999999999999883 45799999999999988765 43 377888999999999999999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.+. +...+++++.++|||||++++.++.
T Consensus 124 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 124 IYNI--GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp GGGT--CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred ceec--CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 5554 6789999999999999999999864
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=1.3e-13 Score=138.32 Aligned_cols=101 Identities=24% Similarity=0.335 Sum_probs=87.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+ ..++++|+++.|++.++++ ++ ++.+..++++.+|+++++||+|+|..+ +
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-l 97 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA-A 97 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC-G
T ss_pred CCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc-h
Confidence 4799999999999999999885 3699999999999888754 33 467888899999999999999999988 4
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++.+++..++.++.++|||||++++.++..
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 455788899999999999999999988654
No 21
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.49 E-value=9.3e-14 Score=143.33 Aligned_cols=103 Identities=24% Similarity=0.306 Sum_probs=88.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.. ...++++|+|+.|++.|+++ ++ .+.+..+++..+|+++++||+|++..+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 34799999999999999999872 23799999999999888764 33 467888999999999999999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+. +.+++..+|+++.|+|||||++++.++..
T Consensus 160 l~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 160 FL-HSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp GG-GCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hh-hcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 44 45678899999999999999999998754
No 22
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=1.4e-13 Score=138.45 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=87.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
...+|||||||+|.++..+++.+ ..++++|+|+.|++.++++ ..++.+..+++..+++++++||+|++..+ +
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL-W 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC-G
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc-h
Confidence 45799999999999999999874 4699999999999999877 34677888999999999999999999988 6
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEE
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis 354 (667)
|+.++...++.++.++|||||++++.
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 67778889999999999999999988
No 23
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=1.3e-13 Score=141.31 Aligned_cols=101 Identities=15% Similarity=0.265 Sum_probs=89.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccccC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d 333 (667)
..+|||||||+|.++..+++.+ ..++++|+|+.|++.++++..++.+..+|+..+|+ +++||+|++..+ +++.++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~-l~~~~d 132 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAM-LHWVKE 132 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESC-GGGCSC
T ss_pred CCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcch-hhhCcC
Confidence 4799999999999999999853 57999999999999999886677788889999998 579999999988 666788
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 334 DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 334 ~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+..+|+++.|+|||||++++..+...
T Consensus 133 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 133 PEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 89999999999999999999987653
No 24
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.48 E-value=1.4e-13 Score=139.92 Aligned_cols=102 Identities=21% Similarity=0.346 Sum_probs=89.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++... .+..+++..+++++++||+|++..+++|+.+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 34799999999999999999885 3689999999999999988653 3777899999999999999999887788877
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++..+|+++.++|||||.+++.++..
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 88899999999999999999998753
No 25
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.48 E-value=1.1e-13 Score=138.71 Aligned_cols=101 Identities=19% Similarity=0.190 Sum_probs=86.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCC--CCCCCCccEEEeccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL--PYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L--pfpd~sFDlV~~s~~ll~~ 330 (667)
+..+|||||||+|.++..+++.+. .++++|+|+.|++.++++ +.+..+++..+ |+++++||+|+|..++.|
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~- 113 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH- 113 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGG-
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhh-
Confidence 347999999999999999998854 489999999999999887 66777777765 888999999999988444
Q ss_pred ccC--HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 331 DQK--DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 331 ~~d--~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.++ ...+++++.++|||||++++.++....
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 453 378999999999999999999987654
No 26
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.48 E-value=9.3e-14 Score=142.88 Aligned_cols=115 Identities=17% Similarity=0.303 Sum_probs=92.5
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPA 301 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~ 301 (667)
..+.+.+.+.+.... ..+|||||||+|.++..|++.+. .++++|+|+.|++.|+++. ..+
T Consensus 43 ~~~~~~l~~~l~~~~--------~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQHG--------CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHTT--------CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhcccC--------CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 444455555555333 37999999999999999999864 6899999999999987642 245
Q ss_pred eEEeecccCCC---CCCCCccEEEec-ccccccccC-------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 302 MIGSFASKQLP---YPSLSFDMLHCA-RCGVDWDQK-------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 302 ~~~~~da~~Lp---fpd~sFDlV~~s-~~ll~~~~d-------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.+..++...++ +++++||+|+|. .+ +++..+ ...+++++.++|||||+|++..+.
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~-l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNS-FAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTC-GGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecChhhCccccccCCCeEEEEEcChH-HhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 57778888888 888999999998 66 555556 678999999999999999999875
No 27
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.47 E-value=2.6e-13 Score=133.16 Aligned_cols=101 Identities=19% Similarity=0.257 Sum_probs=86.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
...+|||||||+|.++..+++.+ ..++++|+++.|++.|+++.. ++.+.++|+..++ ++++||+|+|+.+ ++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEV-LY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESC-GG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccH-HH
Confidence 34799999999999999999884 579999999999999987642 4678888998888 6789999999988 55
Q ss_pred cccCH---HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 330 WDQKD---GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 330 ~~~d~---~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+.+++ ..++.++.++|||||+++++++..
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 55555 468999999999999999988754
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.47 E-value=1.9e-13 Score=133.40 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=86.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-CCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg-l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
..+|||||||+|.++..+++.+ ..++++|+++.+++.+++.+ .++.+..+|+..+ +++++||+|+|+.+ +++.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~-l~~~~ 121 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW-LAHVP 121 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESC-GGGSC
T ss_pred CCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEech-hhcCC
Confidence 3699999999999999999884 46899999999999998877 4677888898888 78899999999988 44455
Q ss_pred CH--HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 333 KD--GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 333 d~--~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++ ..+|+++.++|||||.+++.++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 54 689999999999999999998765
No 29
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.47 E-value=1.8e-13 Score=137.74 Aligned_cols=101 Identities=18% Similarity=0.162 Sum_probs=87.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||||||+|.++..+++.+. ..++++|+|+.+++.|+++ ++. +.+..+|+..+|+++++||+|+|..+
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 347999999999999999998853 3799999999999988765 443 67888999999999999999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.|. +...+++++.++|||||+++++++.
T Consensus 124 l~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 124 IYNI--GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp SCCC--CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred Hhhc--CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 5554 6789999999999999999999864
No 30
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.47 E-value=1.7e-13 Score=140.27 Aligned_cols=99 Identities=10% Similarity=-0.016 Sum_probs=82.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------------CCceEEeecccCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------------LPAMIGSFASKQL 311 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------------------l~~~~~~~da~~L 311 (667)
..+|||+|||+|..+..|+++|. .|+|+|+|+.|++.|+++. .++.+.++|+..+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 47999999999999999999875 5899999999999987543 3567889999999
Q ss_pred CCCC-CCccEEEeccccccccc-CHHHHHHHHHhcccCCeEEEEEe
Q 005959 312 PYPS-LSFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 312 pfpd-~sFDlV~~s~~ll~~~~-d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
++++ ++||+|++..++.+..+ +...+++++.|+|||||+|++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9875 89999999877555433 34579999999999999997654
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.47 E-value=2.6e-13 Score=133.64 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=83.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CceEEeecccCCCCCCCCccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~Lpfpd~sFDlV~~ 323 (667)
..+|||||||+|.++..+++.+ ....++++|+++.+++.|+++. + ++.+.++++..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 4799999999999999999874 3357999999999999998762 2 567888888888888889999999
Q ss_pred cccccccccCH--HHHHHHHHhcccCCeEEEEEeC
Q 005959 324 ARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 324 s~~ll~~~~d~--~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..++.| .+++ ..+++++.++|||||+++++..
T Consensus 109 ~~~l~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 109 IEVIEH-LDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp ESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 988554 4544 6899999999999997776654
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.47 E-value=9.9e-14 Score=139.10 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=88.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
...+|||||||+|.++..+++.+ ...++++|+++.|++.|+++. ..+.+..+++..+++++++||+|+|..++.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 45799999999999999999875 346899999999999998875 2467788899999999999999999998555
Q ss_pred cc-cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 330 WD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 330 ~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+. ++...+|+++.++|||||++++.++.
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 43 34678999999999999999999864
No 33
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.47 E-value=2.8e-13 Score=134.71 Aligned_cols=101 Identities=22% Similarity=0.348 Sum_probs=88.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--CceEEeecccCCCCCCCCccEEEecccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 331 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~ 331 (667)
..+|||||||+|.++..+++.+. ..++++|+++.|++.|+++.. ++.+..+++..+++++++||+|++..+ +++.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLA-LHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESC-GGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecc-cccc
Confidence 47999999999999999998853 268999999999999988753 467788899899998899999999987 5556
Q ss_pred cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 332 QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 332 ~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++...+|+++.++|||||+++++++.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 78889999999999999999999864
No 34
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.46 E-value=1.5e-13 Score=148.40 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=90.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---------C----CCceEEeecccCC------CC
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------G----LPAMIGSFASKQL------PY 313 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er---------g----l~~~~~~~da~~L------pf 313 (667)
++.+|||||||+|.++..+++.......|+++|+|+.|++.|+++ | .++.+..+++..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 457999999999999999988632345799999999999999876 4 4678888898887 99
Q ss_pred CCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 314 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 314 pd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++++||+|+++.+ +++.++...+|+++.|+|||||+|+++++..
T Consensus 163 ~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 163 PDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEEEEEEccc-hhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9999999999987 6667788999999999999999999987654
No 35
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.46 E-value=1.1e-13 Score=137.37 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=88.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
+..+|||||||+|.++..+++.. +...++++|+|+.+++.|+++.. ++.+..+|+..++++ ++||+|+|..++.|
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCcccc
Confidence 45899999999999999999873 34679999999999999987733 577888999999988 89999999988444
Q ss_pred cccCHH--HHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 330 WDQKDG--ILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 330 ~~~d~~--~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.++.. .+++++.|+|||||+++++++....
T Consensus 122 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 122 -LEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp -SCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred -CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 45544 5999999999999999999876544
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.46 E-value=3.6e-13 Score=132.61 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=83.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CceEEeecccCCCCCCCCccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~Lpfpd~sFDlV~~ 323 (667)
..+|||||||+|.++..+++.+ ....++++|+|+.+++.|+++. + .+.+..+|+..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 4799999999999999999875 3367999999999999998762 1 567888888888888899999999
Q ss_pred cccccccccCH--HHHHHHHHhcccCCeEEEEEeC
Q 005959 324 ARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 324 s~~ll~~~~d~--~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..++.| .+++ ..+++++.++|||||+++....
T Consensus 109 ~~~l~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 109 IEVIEH-LDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp ESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHHh-CCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 988554 4544 6899999999999996665543
No 37
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.45 E-value=2.2e-13 Score=139.95 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=87.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCC-CCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lp-fpd~sFDlV~~s~~ 326 (667)
+.+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++ ++ .+.+..+++..++ +++++||+|+|..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 5799999999999999999885 4689999999999998765 33 4667888998888 78899999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++.+++..+|+++.++|||||++++.++..
T Consensus 146 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 146 -LEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp -GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred -hhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 5556788899999999999999999998753
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.45 E-value=3.7e-13 Score=136.45 Aligned_cols=98 Identities=17% Similarity=0.223 Sum_probs=85.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecc-cccccc-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD- 331 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~-~ll~~~- 331 (667)
..+|||||||+|.++..+++.+. .++++|+|+.|++.|+++...+.+..+|+..+++ +++||+|+|.. + +++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~-l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSS-IGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTG-GGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCch-hhhcC
Confidence 47999999999999999998853 6899999999999999987788899999999988 68999999997 6 5544
Q ss_pred --cCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 332 --QKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 332 --~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
++...+|+++.++|||||+|++.+.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3456799999999999999999854
No 39
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.4e-13 Score=142.67 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=86.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-------CCCceEEeecccCCCCCC------CCcc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------GLPAMIGSFASKQLPYPS------LSFD 319 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-------gl~~~~~~~da~~Lpfpd------~sFD 319 (667)
+..+|||||||+|.++..|++.......++++|+|+.|++.|+++ ..++.+.++++..+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 458999999999999999996311356799999999999998875 446788899999999887 8999
Q ss_pred EEEecccccccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 320 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 320 lV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
+|+|..+ +|+. +...++.++.++|||||.|++.+
T Consensus 116 ~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 116 MITAVEC-AHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeHhhH-HHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999988 5555 88999999999999999999844
No 40
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.45 E-value=8.6e-14 Score=144.12 Aligned_cols=104 Identities=15% Similarity=0.090 Sum_probs=78.6
Q ss_pred CCCEEEEeCCCCchHHHHH----hhcCCcee--EEEEecCCHHHHHHHHHc-----CCC-c--eEEeecccCCC------
Q 005959 253 GVRTILDIGCGYGSFGAHL----FSKELLTM--CIANYEASGSQVQLTLER-----GLP-A--MIGSFASKQLP------ 312 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~L----a~~g~~~~--sV~gvD~S~~ml~~A~er-----gl~-~--~~~~~da~~Lp------ 312 (667)
+..+|||||||+|.++..+ +.+. ... .++++|+|+.|++.|+++ ++. + .+..++++.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4579999999999876543 3322 223 359999999999988765 222 2 33455555443
Q ss_pred CCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 313 YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 313 fpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++++||+|+|..+ +||.+++..+|++++|+|||||+|++..+..
T Consensus 131 ~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67899999999988 7777899999999999999999999987643
No 41
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.45 E-value=8.6e-13 Score=130.06 Aligned_cols=103 Identities=27% Similarity=0.343 Sum_probs=87.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CceEEeecccCCCCCCCCccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~Lpfpd~sFDlV~~ 323 (667)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++. + .+.+...++..+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 4799999999999999999985 36899999999999998753 2 246788899999999999999999
Q ss_pred cccccccccCHH---HHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 324 ARCGVDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 324 s~~ll~~~~d~~---~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
..+ +++.+++. .+++++.++|||||++++.++....
T Consensus 108 ~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 108 QAF-LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp ESC-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred cch-hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 988 55555665 8999999999999999999876543
No 42
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.44 E-value=7.4e-13 Score=128.53 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=85.5
Q ss_pred EEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccccc-
Q 005959 256 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW- 330 (667)
Q Consensus 256 ~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~- 330 (667)
+|||||||+|.++..+++.+. .++++|.++.+++.|+++ +.++.+..+++..+++++++||+|+|+.. |+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCC
Confidence 899999999999999998853 699999999999988765 55778888899999998899999999643 33
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 331 DQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 331 ~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.++...++.++.++|||||++++.++....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 245678999999999999999999886644
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.43 E-value=1.8e-13 Score=133.98 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=84.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccc-c
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-Q 332 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~-~ 332 (667)
..+|||||||+|.++..+++.+ ..++++|+|+.+++.++++. .+.+..+++..++ ++++||+|+|..++.|+. +
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 4799999999999999999885 36899999999999998873 3445567888888 788999999998855543 2
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+...+|+++.++|||||+++++.+...
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 557899999999999999999976543
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.43 E-value=6e-13 Score=137.19 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=88.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
++.+|||||||+|.++..+++.......++++|+|+.+++.|+++ +.++.+.++|+..++++ ++||+|+|..+ +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~-l 99 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAF-L 99 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESC-G
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECCh-h
Confidence 458999999999999999998732236799999999999988765 33567888999999985 69999999988 5
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++.++...+++++.++|||||++++.++.
T Consensus 100 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 56678889999999999999999999986
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.43 E-value=6.4e-13 Score=130.71 Aligned_cols=101 Identities=22% Similarity=0.282 Sum_probs=85.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|+|+.++.+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 57999999999999999998864 799999999999988765 35678888999999988899999999976322
Q ss_pred c-ccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 330 W-DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 330 ~-~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+ .++...+++++.++|||||.+++.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 2 245678999999999999999998874
No 46
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.43 E-value=8.5e-14 Score=151.22 Aligned_cols=102 Identities=19% Similarity=0.243 Sum_probs=86.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCce---EEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAM---IGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~---~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
...+|||||||+|.++..|++++. .++++|+|+.|++.|++++++.. +...+...+|+++++||+|++..+ ++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v-l~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANT-LC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESC-GG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECCh-HH
Confidence 347999999999999999999864 68999999999999999876543 233455667788899999999998 55
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 330 ~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+.+++..+|+++.++|||||++++.++..
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 55789999999999999999999998753
No 47
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.43 E-value=5e-13 Score=130.02 Aligned_cols=103 Identities=20% Similarity=0.159 Sum_probs=84.8
Q ss_pred CCEEEEeCCCCchH-HHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSF-GAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~-t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||+|||+|.+ ...+++.+ ..++++|.|+.|++.|+++ +.++.+..+++..+++++++||+|+|..+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 47999999999998 44555544 4699999999999888754 4567788889999999999999999998755
Q ss_pred ccc-cCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 329 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 329 ~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
|+. ++...+++++.++|||||++++.++...
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 543 5567899999999999999999987543
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.42 E-value=5.8e-13 Score=130.34 Aligned_cols=101 Identities=20% Similarity=0.234 Sum_probs=84.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCC---CCCC-CCccEEEecccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L---pfpd-~sFDlV~~s~~ll~ 329 (667)
+.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ ....+...+...+ ++.. ++||+|+|..+ ++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~-l~ 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFA-LL 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC-CC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECch-hh
Confidence 47999999999999999998853 689999999999999988 3555666666655 5544 45999999988 44
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 330 ~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
..+...+++++.++|||||++++.++....
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 677889999999999999999999986643
No 49
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.42 E-value=7.2e-13 Score=131.38 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=86.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccc-
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD- 331 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~- 331 (667)
+..+|||||||+|.++..+++.+. .++++|.|+.|++.|+++..++.+..+++..+++ +++||+|+|....+++.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcC
Confidence 347999999999999999998853 6899999999999999887678888889988887 67999999766335555
Q ss_pred --cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 332 --QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 332 --~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++...+|+++.++|||||.+++.++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 344689999999999999999987644
No 50
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.42 E-value=8.7e-13 Score=131.45 Aligned_cols=129 Identities=15% Similarity=0.028 Sum_probs=94.7
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC------CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL------PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl------~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+|||||||+|.++..|++.+ ..++++|+|+.+++.|+++.. ++.+..+|+..++ ++++||+|+|..++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 599999999999999998864 569999999999999987643 2678888988877 456999999998844
Q ss_pred cccc-CHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEee
Q 005959 329 DWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (667)
Q Consensus 329 ~~~~-d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~ 389 (667)
++.+ +...+++++.++|||||++++.+.......... .....-..+..+.+..+|+.+.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP--PYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS--SCCCCHHHHHHHHGGGTEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC--CccCCHHHHHHHHHHcCCeEEE
Confidence 4432 667899999999999999999877543211000 0001123455666667776653
No 51
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.42 E-value=8.7e-13 Score=137.82 Aligned_cols=103 Identities=18% Similarity=0.144 Sum_probs=88.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||||||+|.++..++++. ...|+++|+++.+++.|+++ ++ ++.+..+|+..+|+++++||+|++..+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 45799999999999999999872 24689999999999988764 44 477888999999999999999999988
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+.|+ +...+|+++.++|||||++++.++...
T Consensus 195 l~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 195 TMYV--DLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp GGGS--CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred hhhC--CHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 5554 488999999999999999999986544
No 52
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=1.9e-12 Score=123.49 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=87.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccc-
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD- 331 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~- 331 (667)
+..+|||||||+|.++..+++.+ ..++++|.++.+++.++++..++.+...++..+++++++||+|++....+++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 34799999999999999999885 36899999999999999887678888889988888889999999983335544
Q ss_pred -cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 332 -QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 332 -~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++...++.++.++|+|||.+++..+..
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 334689999999999999999987654
No 53
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.42 E-value=3.9e-13 Score=134.65 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=86.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-----CceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-----~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
...+|||||||+|.++..+++.+ ...++++|+++.|++.|+++.. .+.+..+++..+++++++||+|+|..++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 35799999999999999999875 3579999999999999987642 3567788888999988899999999884
Q ss_pred cccccCH--HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKD--GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~--~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.| .++. ..+|+++.++|||||++++.++..
T Consensus 157 ~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 157 GH-LTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp GG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hh-CCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 44 4443 489999999999999999988644
No 54
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.42 E-value=6.8e-13 Score=129.01 Aligned_cols=104 Identities=24% Similarity=0.289 Sum_probs=87.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
...+|||||||+|.++..+++.+.. .++++|+++.+++.++++. ..+.+..+|+..+++++++||+|++..++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3478999999999999999988643 6899999999999998764 3567888899889999899999999876433
Q ss_pred cc--------------cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 330 WD--------------QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 330 ~~--------------~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.. .+...+++++.++|||||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 22 244689999999999999999999865
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=1.1e-12 Score=126.18 Aligned_cols=100 Identities=17% Similarity=0.280 Sum_probs=83.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+ ..++++|.++.+++.++++ ++ ++.+..+|+..+++ +++||+|++..++.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred CCeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 3799999999999999999885 3689999999999888754 44 57788889988888 78999999998855
Q ss_pred ccc-cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
|+. ++...+++++.++|||||++++.++.
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 443 25678999999999999998887643
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.41 E-value=5.2e-13 Score=136.12 Aligned_cols=104 Identities=22% Similarity=0.283 Sum_probs=89.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
+..+|||||||+|.++..+++.+ +...++++|+++.+++.|+++ ++ ++.+...|+..+++++++||+|++..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV- 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC-
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech-
Confidence 45799999999999999999873 346799999999999988765 33 567888899999999999999999988
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++.+++..+++++.++|||||++++.++..
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 6666788899999999999999999988643
No 57
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.41 E-value=1.4e-12 Score=124.18 Aligned_cols=131 Identities=16% Similarity=0.212 Sum_probs=96.2
Q ss_pred cccccccccccccch--hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH
Q 005959 216 EQISFRSASLIFDGV--EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL 293 (667)
Q Consensus 216 ~~~~F~~~~~~yd~~--~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~ 293 (667)
..+.|......|... ....+.+.+.+... ...+|||+|||+|.++..+++. ...++++|.++.+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~ 89 (194)
T 1dus_A 21 KKLKFKTDSGVFSYGKVDKGTKILVENVVVD--------KDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKL 89 (194)
T ss_dssp EEEEEEEETTSTTTTSCCHHHHHHHHHCCCC--------TTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHH
T ss_pred CceEEEeCCCcCCccccchHHHHHHHHcccC--------CCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHH
Confidence 334454444455222 24445555555433 3479999999999999999987 3579999999999988
Q ss_pred HHHc----CCC---ceEEeecccCCCCCCCCccEEEeccccccc-ccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 294 TLER----GLP---AMIGSFASKQLPYPSLSFDMLHCARCGVDW-DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 294 A~er----gl~---~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~-~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
++++ ++. +.+...++.. ++++++||+|+++.. +++ ..+...+++++.++|+|||.+++.++...
T Consensus 90 a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 90 AKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPP-IRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp HHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCC-STTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred HHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCC-cccchhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 8765 443 6777777766 455779999999876 444 34557899999999999999999988653
No 58
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.41 E-value=7.8e-13 Score=131.28 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=85.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEecc-cc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~-~l 327 (667)
+..+|||||||+|.++..+++.+ ..++++|.++.|++.|+++ +..+.+..+++..++++ ++||+|+|.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccc
Confidence 34799999999999999999885 3689999999999988765 34678888899998887 7999999998 74
Q ss_pred cccc--cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 328 VDWD--QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 328 l~~~--~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.|+. ++...+|+++.++|||||++++..+.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4442 45678999999999999999998774
No 59
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=1.2e-12 Score=134.23 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=84.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+..+|+..+| ++||+|+|..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGA 138 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCc
Confidence 34799999999999999999542 23799999999999998775 32 4667778887766 78999999998
Q ss_pred ccccc-cCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ll~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+.|+. ++...+|+++.++|||||.+++.++...
T Consensus 139 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred hhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 55554 5678899999999999999999987654
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.39 E-value=1.6e-12 Score=128.56 Aligned_cols=96 Identities=24% Similarity=0.297 Sum_probs=84.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccccC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d 333 (667)
..+|||||||+|.++..+++. +++|.++.+++.++++ .+.+..+++..+++++++||+|++..+ +++.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTT-ICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESC-GGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcch-HhhccC
Confidence 478999999999999998765 8999999999999987 566777888889999899999999988 555678
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 334 DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 334 ~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+..+|+++.++|+|||+++++++...
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 88999999999999999999987654
No 61
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=5.7e-13 Score=133.38 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=81.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCceEEeecccCC--CCCCCCccEEEe-ccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQL--PYPSLSFDMLHC-ARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~da~~L--pfpd~sFDlV~~-s~~ 326 (667)
..+|||||||+|.++..+++.+ ...++++|.|+.|++.|+++. .++.+..+++..+ ++++++||+|++ .+.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 4799999999999999998764 347999999999999998753 4567788888888 899999999999 544
Q ss_pred c-ccc--ccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 327 G-VDW--DQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 l-l~~--~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
. .+. ..+...+++++.|+|||||+|++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 2 111 12234679999999999999998765
No 62
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.39 E-value=1.9e-12 Score=124.07 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=77.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC-CCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp-fpd~sFDlV~~s~~ 326 (667)
...+|||+|||+|.++..|++. ...|+++|.|+.|++.|+++ ++ ++.+...+...++ +.+++||+|+++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 3479999999999999999987 35699999999999988765 43 4566666666654 55789999998743
Q ss_pred cccc--------ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~--------~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.++. ..+...++.++.++|||||++++.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 2322 1233578999999999999999987643
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.39 E-value=7.9e-13 Score=136.98 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=86.5
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--------CCceEEeecccCCCCCCCCccEEEeccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--------LPAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg--------l~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
.+|||||||+|.++..|++.+ ..|+++|+|+.|++.|+++. .++.+.++|+..+++ +++||+|+|...
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 589999999999999999985 35899999999999988652 357788999999988 679999998766
Q ss_pred ccccccC--HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 327 GVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 327 ll~~~~d--~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.+++.+. ...+|+++.++|||||+|++.++....
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 5776643 468999999999999999999986543
No 64
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.38 E-value=1.9e-12 Score=134.28 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=83.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-CCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~-g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~ 325 (667)
+..+|||||||+|.++..+++. + ..|+++|+|+.|++.|+++ ++ .+.+..+|+..+ +++||+|++..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG 145 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc
Confidence 3479999999999999999987 4 5699999999999988765 44 366777887766 68999999998
Q ss_pred cccccccCH---------HHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 326 CGVDWDQKD---------GILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 326 ~ll~~~~d~---------~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
++.|+ +++ ..+++++.++|||||++++.++....
T Consensus 146 ~~~~~-~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 146 AFEHF-ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp CGGGT-TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred hHHhc-CccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 85554 333 68999999999999999999886543
No 65
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.38 E-value=7.5e-13 Score=138.98 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-------ceEEeecc------cCC--CCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-------AMIGSFAS------KQL--PYP 314 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-------~~~~~~da------~~L--pfp 314 (667)
..+|||||||+|..+..++..+ ...|+|+|+|+.|++.|+++ +.. +.+.+.++ ..+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 5799999999998666666554 34699999999999999875 221 23545554 333 467
Q ss_pred CCCccEEEecccccccc---cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 315 SLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 315 d~sFDlV~~s~~ll~~~---~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+++||+|+|.++ +|+. ++...+|+++.|+|||||+|+++++.
T Consensus 127 ~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 789999999987 5442 34578999999999999999999875
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.37 E-value=2e-12 Score=126.82 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=86.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccC--CCCCCCCccEEEeccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ--LPYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~--Lpfpd~sFDlV~~s~~ll~~ 330 (667)
+..+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. .+..+++.. +++++++||+|++..+ +++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~-l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDV-LEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESC-GGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECCh-hhh
Confidence 45799999999999999999884 579999999999999987653 556667665 6788899999999988 555
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 331 DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 331 ~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.+++..++.++.++|+|||+++++++...
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 67788999999999999999999987653
No 67
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=9.4e-13 Score=132.80 Aligned_cols=113 Identities=15% Similarity=0.118 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEee
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSF 306 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~ 306 (667)
..+.+.+++.+.. .+.+|||||||+|..+..+++.. ..+++++|+|+.|++.|+++ +..+.+..+
T Consensus 47 ~~~m~~~a~~~~~---------~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 47 TPYMHALAAAASS---------KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp HHHHHHHHHHHTT---------TCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhcc---------CCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee
Confidence 3455555555431 34799999999999999998874 45789999999999999865 344556666
Q ss_pred cccCC--CCCCCCccEEEec-----ccccccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 307 ASKQL--PYPSLSFDMLHCA-----RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 307 da~~L--pfpd~sFDlV~~s-----~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
+++.+ ++++++||.|++- .. .++..+...++.++.|+|||||+|++..
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~-~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEE-TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGG-GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHhhcccccccCCceEEEeeeecccc-hhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 65543 5888999999752 22 3334567789999999999999998854
No 68
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.36 E-value=1.6e-12 Score=135.36 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=85.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CC--ceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LP--AMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~--~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||||||+|.++..++........++++|+++.+++.|+++. +. +.+.++|+..++++ ++||+|+|+.+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 3579999999999999999644345568999999999999998763 22 67888999999988 89999999987
Q ss_pred ccccccCHH---HHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d~~---~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++| .+++. .+++++.++|||||++++++...
T Consensus 197 ~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 197 NIY-EPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GGG-CCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 444 44554 37999999999999999998654
No 69
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.36 E-value=6.2e-13 Score=135.88 Aligned_cols=104 Identities=16% Similarity=0.056 Sum_probs=79.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------C---------------------------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------L--------------------------- 299 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg------l--------------------------- 299 (667)
++.+|||||||+|.++..++..++ .+|+++|+|+.|++.|+++. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 457899999999998888777753 47999999999999887531 0
Q ss_pred -Cc-eEEeecccC-CCCC---CCCccEEEecccccccc---cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 300 -PA-MIGSFASKQ-LPYP---SLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 300 -~~-~~~~~da~~-Lpfp---d~sFDlV~~s~~ll~~~---~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+ .+..+|+.. .|++ .++||+|+|+++++|.. ++...+++++.|+|||||+|++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 01 156677766 3443 57999999999955543 344689999999999999999997543
No 70
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.36 E-value=2.8e-12 Score=127.45 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=82.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEecc-ccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~-~ll 328 (667)
..+|||||||+|.++..+++. ..++++|.|+.|++.|+++ +.++.+..+++..++++ ++||+|+|.. + +
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~-~ 107 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDS-L 107 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTG-G
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCc-h
Confidence 379999999999999999876 4689999999999988765 45677888898888887 7999999986 5 4
Q ss_pred ccc---cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWD---QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~---~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++. ++...+++++.++|||||.+++..+.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 444 34467999999999999999998764
No 71
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.35 E-value=1.2e-12 Score=134.99 Aligned_cols=102 Identities=20% Similarity=0.118 Sum_probs=75.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCC--------------------------------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP-------------------------------- 300 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~-------------------------------- 300 (667)
.+.+|||||||+|.++..++... ...|+++|+|+.|++.|+++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 34799999999999554444432 34799999999999988763110
Q ss_pred ---ceEEeecccC-CCC-----CCCCccEEEeccccccc---ccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 301 ---AMIGSFASKQ-LPY-----PSLSFDMLHCARCGVDW---DQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 301 ---~~~~~~da~~-Lpf-----pd~sFDlV~~s~~ll~~---~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..+..+|+.. +|+ ++++||+|+|+.++.+. .++...+|+++.|+|||||+|++...
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2344557766 664 45679999999884442 34577899999999999999999853
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.34 E-value=5.4e-12 Score=126.62 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=83.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
+..+|||||||+|.++..+++.+. .++++|+|+.|++.|+++ +.++.+.++|+..++++ ++||+|+|....+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCch
Confidence 347999999999999999998853 689999999999988754 55778888899888876 6899999875444
Q ss_pred ccc--cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWD--QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~--~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++. ++...+++++.++|||||.+++..+.
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 443 34568999999999999999987764
No 73
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.34 E-value=4.7e-12 Score=132.11 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=85.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-CCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~-g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~ 325 (667)
+..+|||||||+|.++..+++. + ..|+++|+|+.+++.|+++ ++ .+.+..+|+..+| ++||+|++..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~ 163 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFD---VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE 163 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CcCEEEEEcccchHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeC
Confidence 4479999999999999999987 4 3799999999999998865 33 3667778887775 7899999998
Q ss_pred cccccc-cCHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 326 CGVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 326 ~ll~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
++.|+. ++...+++++.++|||||.+++.++....
T Consensus 164 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 164 AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 855544 56788999999999999999999987654
No 74
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.33 E-value=6.2e-12 Score=129.09 Aligned_cols=100 Identities=13% Similarity=0.229 Sum_probs=83.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
..+|||||||+|.++..|++.+. .|+++|+++.+++.|+++ ++++.+..+|+..+++ +++||+|+|+.+++|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 47999999999999999999853 689999999999887654 5577888889988887 789999999988554
Q ss_pred cc-cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 330 WD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 330 ~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.. ++...+++++.++|||||++++....
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 43 33458999999999999998876543
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.33 E-value=3.1e-12 Score=131.03 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=85.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCC-CCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY-PSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpf-pd~sFDlV~~s~ 325 (667)
+..+|||||||+|.++..+++.+ ...++++|+++.|++.|+++ +. ++.+..+|+..+++ ++++||+|+|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 34799999999999999998875 34799999999999988765 22 35678889988888 688999999998
Q ss_pred ccccc---ccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CGVDW---DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~ll~~---~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++++. .++...+|+++.++|||||++++.++.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 84331 345578999999999999999999875
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.33 E-value=2e-12 Score=130.20 Aligned_cols=104 Identities=17% Similarity=0.137 Sum_probs=83.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--C------------------------------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--P------------------------------ 300 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~------------------------------ 300 (667)
.+.+|||||||+|.++..+++.+. ..|+++|+|+.|++.|+++.. +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 457899999999999999988753 579999999999998876521 1
Q ss_pred --c-eEEeecccCCC-CCC---CCccEEEeccccccc---ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 301 --A-MIGSFASKQLP-YPS---LSFDMLHCARCGVDW---DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 301 --~-~~~~~da~~Lp-fpd---~sFDlV~~s~~ll~~---~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+ .+..+++..++ +++ ++||+|+|..++.+. .++...++.++.++|||||+|++.++..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 4 67778877764 355 899999999885432 3356789999999999999999998543
No 77
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.33 E-value=3.1e-11 Score=117.76 Aligned_cols=99 Identities=15% Similarity=0.009 Sum_probs=80.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+ ....++++|.++.+++.|+++ ++ ++.+..+++.......++||+|++... .
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 118 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-G 118 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-T
T ss_pred CCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-C
Confidence 4799999999999999999884 346799999999999988764 43 466777777554444468999999876 3
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+ +...++.++.++|||||++++..+.
T Consensus 119 ~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 6778999999999999999998764
No 78
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.33 E-value=3.8e-12 Score=131.37 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=78.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCC-----CCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY-----PSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpf-----pd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..|++++ ..|+++|.|+.|++.|+++.... +...+...++. .+++||+|+|+.+++
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred cCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhhhH
Confidence 4799999999999999999986 36899999999999998875332 23334444433 257899999998866
Q ss_pred ccc-cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 329 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 329 ~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
|+. ++...++.++.++| |||.++++....
T Consensus 122 ~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 122 RFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp GSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred hCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 654 34467999999999 999999998654
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=2e-12 Score=129.47 Aligned_cols=104 Identities=12% Similarity=0.038 Sum_probs=85.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--CceEEeecccCCCCCC-----CCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPS-----LSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~~~~~~~da~~Lpfpd-----~sFDlV~~s~ 325 (667)
...+|||||||+|.++..|++.+. .|+++|+|+.|++.|+++.. ++.+.++|+..+++.. .+||+|++..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 347899999999999999999864 68999999999999988743 5677888887765432 3499999998
Q ss_pred ccccccc--CHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 326 CGVDWDQ--KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 326 ~ll~~~~--d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
+ +|+.+ +...+++++.++|||||++++.++....
T Consensus 133 ~-~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 133 G-FHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp S-STTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred h-hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 7 55555 5678999999999999999999886544
No 80
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.32 E-value=4.1e-12 Score=129.09 Aligned_cols=99 Identities=22% Similarity=0.347 Sum_probs=85.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..+++.. ....++++|+++.|++.|++++..+.+..+++..+|+++++||+|++..+ .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~---- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P---- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C----
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h----
Confidence 34799999999999999999872 23479999999999999999887788888999999999999999998754 1
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 333 KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.++.++.++|||||.+++.++....
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3589999999999999999986543
No 81
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.32 E-value=3.4e-12 Score=133.27 Aligned_cols=102 Identities=23% Similarity=0.354 Sum_probs=83.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------------CCceEEeecccCCC----CC--
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------------LPAMIGSFASKQLP----YP-- 314 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg------------l~~~~~~~da~~Lp----fp-- 314 (667)
...+|||||||+|.++..+++.+ ...++++|+|+.|++.|+++. .++.+.++|+..++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 34799999999999999998763 457999999999999887652 14567888888876 64
Q ss_pred CCCccEEEecccccccc-cC---HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 315 SLSFDMLHCARCGVDWD-QK---DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 315 d~sFDlV~~s~~ll~~~-~d---~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+++||+|+|..+ +||. .+ ...+|.++.++|||||+|+++.+.
T Consensus 112 ~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 112 QMCFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TCCEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 459999999987 6665 33 458999999999999999999885
No 82
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.31 E-value=3.7e-12 Score=132.33 Aligned_cols=102 Identities=16% Similarity=0.240 Sum_probs=81.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------------------------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------------------------- 298 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------------------------------- 298 (667)
...+|||||||+|.++..++++. ....|+++|+++.|++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 45799999999999999999872 3457999999999999998752
Q ss_pred -----------------------------CCceEEeecccCCC-----CCCCCccEEEecccccccc------cCHHHHH
Q 005959 299 -----------------------------LPAMIGSFASKQLP-----YPSLSFDMLHCARCGVDWD------QKDGILL 338 (667)
Q Consensus 299 -----------------------------l~~~~~~~da~~Lp-----fpd~sFDlV~~s~~ll~~~------~d~~~~L 338 (667)
.++.+.++|....+ +.+++||+|+|..+ ++|. ++...+|
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHH
Confidence 13556666665443 57789999999987 4333 2456899
Q ss_pred HHHHhcccCCeEEEEEeC
Q 005959 339 LEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 339 ~Ei~RvLKPGG~Lvis~p 356 (667)
+++.++|||||+|++...
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 999999999999999754
No 83
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.31 E-value=9.5e-12 Score=120.14 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=83.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC--CCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp--fpd~sFDlV~~s~ 325 (667)
...+|||+|||+|.++..+++.+ ...|+++|.++.|++.|+++ ++ ++.+.++|+..++ +++++||+|+++.
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 34799999999999999888875 34699999999999988764 43 5678888877664 4578999999987
Q ss_pred cccccc-cCHHHHHHHHHh--cccCCeEEEEEeCCC
Q 005959 326 CGVDWD-QKDGILLLEVDR--VLKPGGYFVWTSPLT 358 (667)
Q Consensus 326 ~ll~~~-~d~~~~L~Ei~R--vLKPGG~Lvis~p~~ 358 (667)
. +++. ++...++.++.+ +|+|||++++.....
T Consensus 122 p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 P-YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp C-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred C-CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 6 4443 566789999999 999999999987643
No 84
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.30 E-value=4.5e-12 Score=128.86 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=83.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHH------HHHHHHHc----CC--CceEEeec---ccCCCCCCCCc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGS------QVQLTLER----GL--PAMIGSFA---SKQLPYPSLSF 318 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~------ml~~A~er----gl--~~~~~~~d---a~~Lpfpd~sF 318 (667)
..+|||||||+|.++..++++......++++|+|+. |++.|+++ ++ ++.+..+| ...+|+++++|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 479999999999999999987312357999999987 88887665 22 45677776 56678888999
Q ss_pred cEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 319 DMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 319 DlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
|+|+|..+ +++.+++..+++.+.++++|||++++.+....
T Consensus 124 D~v~~~~~-l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 124 DRVVLAHS-LWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp SEEEEESC-GGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEEEccc-hhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 99999988 45556777777777778888999999987653
No 85
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=3.7e-12 Score=126.75 Aligned_cols=89 Identities=19% Similarity=0.320 Sum_probs=79.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecc-cCCCCC-CCCccEEEecccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQLPYP-SLSFDMLHCARCGVDWD 331 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da-~~Lpfp-d~sFDlV~~s~~ll~~~ 331 (667)
..+|||||||+|.++..+++.+ ..|+++|+|+.|++.++++..++.+.++|+ +.+|++ +++||+|+|+
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 4799999999999999999985 469999999999999999877788888888 678988 8999999987
Q ss_pred cCHHHHHHHHHhcccCCeEEE
Q 005959 332 QKDGILLLEVDRVLKPGGYFV 352 (667)
Q Consensus 332 ~d~~~~L~Ei~RvLKPGG~Lv 352 (667)
.+...+++++.++|||||.++
T Consensus 119 ~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SCCSGGGGGHHHHEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCcEEE
Confidence 245578999999999999999
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.28 E-value=9e-12 Score=122.20 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=85.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccccC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d 333 (667)
..+|||||||+|.++..++ ..++++|+++. .+.+..+++..+|+++++||+|+|..++ |+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SC
T ss_pred CCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cC
Confidence 4789999999999998884 34899999976 4557778888899999999999999884 54 77
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEeec
Q 005959 334 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (667)
Q Consensus 334 ~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~~ 390 (667)
...++.++.++|+|||++++.++.... ..-..+..+.+..+|+.+..
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRF----------EDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGC----------SCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCC----------CCHHHHHHHHHHCCCEEEEE
Confidence 889999999999999999999864321 01233455566667766543
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.28 E-value=2.1e-11 Score=115.30 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=76.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-ceEEeecc-cCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFAS-KQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da-~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||||||+|.++..+++.. ....++++|.++.+++.|+++ +.. ..+...+. +.++..+++||+|++..+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~- 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG- 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC--
T ss_pred CCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc-
Confidence 4799999999999999998873 456799999999999998865 443 12555554 333433379999999987
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++ ..+++++.++|||||++++.++..
T Consensus 104 ~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 104 LTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred ccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 333 569999999999999999988753
No 88
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.28 E-value=1.6e-11 Score=128.68 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=78.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
++.+|||||||+|.++..++.+- ....|+++|.+++|++.|+++ ++ ++.+.++|+..+| +++||+|++...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 45899999999998775544331 346799999999999998865 54 5678888888775 789999998643
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.++..++++++.|+|||||+|++...
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 46778999999999999999999874
No 89
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.27 E-value=2e-11 Score=141.82 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=86.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----------C-CCceEEeecccCCCCCCCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------G-LPAMIGSFASKQLPYPSLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----------g-l~~~~~~~da~~Lpfpd~sFDlV~ 322 (667)
+.+|||||||+|.++..|++.+.....|+++|+++.|++.|+++ + .++.+.++|+..+++++++||+|+
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 47999999999999999998863346799999999999999762 2 246788999999999999999999
Q ss_pred ecccccccccCHH--HHHHHHHhcccCCeEEEEEeCCC
Q 005959 323 CARCGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 323 ~s~~ll~~~~d~~--~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
|..++.| .+++. .+++++.|+|||| .++++++..
T Consensus 802 ~~eVLeH-L~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 802 CLEVIEH-MEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EESCGGG-SCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EeCchhh-CChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9988554 44443 5899999999999 888888754
No 90
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.27 E-value=2.1e-11 Score=118.02 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=82.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCC-CCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lp-fpd~sFDlV~~s~~ 326 (667)
..+|||+|||+|.++..+++..-....++++|.++.+++.|+++ ++ ++.+..+|+..++ +.+++||+|++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 47999999999999999998721234799999999999988765 33 5678888888776 66789999999865
Q ss_pred cccc--------ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~--------~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+.. ..+...++.++.++|||||++++..+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 3221 1133579999999999999999988643
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=4.2e-11 Score=113.11 Aligned_cols=108 Identities=12% Similarity=0.182 Sum_probs=85.3
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEe
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGS 305 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~ 305 (667)
......+.+.+.... ..+|||+|||+|.++..+++. ...++++|.++.+++.++++ ++ ++.+..
T Consensus 21 ~~~~~~~~~~~~~~~--------~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 89 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNK--------DDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK 89 (183)
T ss_dssp HHHHHHHHHHHCCCT--------TCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHcCCCC--------CCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 334445555554333 379999999999999999883 45799999999999988765 33 466777
Q ss_pred ecccCCCCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 306 FASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 306 ~da~~Lpfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... ++++++||+|++..+ .+...++.++.++ |||.+++.++.
T Consensus 90 ~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 90 GRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp SCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred CCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 78776 777789999999876 5567899999999 99999999874
No 92
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=2.7e-11 Score=131.33 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=85.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
...+|||+|||+|.++..+++.+ ..|+++|+++.+++.|+++ ++.+.+...|+...+.++++||+|+|+.. +
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~ 308 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP-F 308 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-C
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc-h
Confidence 34799999999999999999985 3799999999999888754 55678888899888887789999999977 4
Q ss_pred cc-----ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 329 DW-----DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 329 ~~-----~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
|+ .++...++.++.++|||||.++++....
T Consensus 309 ~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 309 HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 54 3445689999999999999999987643
No 93
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.25 E-value=2.5e-11 Score=119.64 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=82.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC--CCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp--fpd~sFDlV~~s~~ 326 (667)
..+|||||||+|.++..+++.. +...++++|+++.+++.|+++ ++ ++.+..+|+..++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 4689999999999999999873 346799999999999888754 43 5678888888887 78889999999865
Q ss_pred cccccc--------CHHHHHHHHHhcccCCeEEEEEeC
Q 005959 327 GVDWDQ--------KDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~~~--------d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..|.. ....++.++.++|+|||.+++...
T Consensus 121 -~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 -DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred -CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 33322 125799999999999999999865
No 94
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.25 E-value=1.8e-11 Score=121.30 Aligned_cols=101 Identities=13% Similarity=0.202 Sum_probs=81.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC--CCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp--fpd~sFDlV~~s~~ 326 (667)
..+|||||||+|.++..|++.. +...++|+|+|+.|++.|+++ ++ ++.+..+|+..++ +++++||.|++.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 3689999999999999999873 346799999999999888764 44 5678888888876 78889999998754
Q ss_pred ccccccC--------HHHHHHHHHhcccCCeEEEEEeC
Q 005959 327 GVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~~~d--------~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..|... ...++.++.++|||||.|++.+.
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 333321 25799999999999999999875
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.25 E-value=1.6e-11 Score=117.35 Aligned_cols=93 Identities=10% Similarity=0.022 Sum_probs=76.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccccC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~d 333 (667)
..+|||+|||+|.++..+++++ .++++|+++.|++. ..++.+.++|+.. ++++++||+|+|+.. +++.++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPP-YVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCC-CccCCc
Confidence 4699999999999999999885 79999999999987 3456677888776 677789999999876 444322
Q ss_pred ---------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 334 ---------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 334 ---------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
...++.++.+.| |||.+++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 246889999999 99999998764
No 96
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.24 E-value=1.1e-11 Score=123.83 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=81.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCC-C--CCCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQL-P--YPSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~L-p--fpd~sFDlV~~s~ 325 (667)
..+|||||||+|.++..+++.. +...|+|+|+|+.|++.|+++ ++ ++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 4689999999999999999874 346799999999999887654 44 567888887774 4 7889999999986
Q ss_pred cccccccCH--------HHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CGVDWDQKD--------GILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~ll~~~~d~--------~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. ..|.... ..++.++.|+|||||+|++++..
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 5 4443222 25999999999999999998763
No 97
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.24 E-value=3.5e-11 Score=124.46 Aligned_cols=104 Identities=11% Similarity=0.035 Sum_probs=81.5
Q ss_pred CCEEEEeCCCC---chHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccCCC-----------CCCC
Q 005959 254 VRTILDIGCGY---GSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLP-----------YPSL 316 (667)
Q Consensus 254 ~~~VLDIGCGt---G~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~Lp-----------fpd~ 316 (667)
..+|||||||+ |.++..+.+.. +...|+++|+|+.|++.|+++. ..+.+..+|+...+ ++..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 47999999999 99887766542 3467999999999999998762 35677888875421 3334
Q ss_pred CccEEEecccccccccC--HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 317 SFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 317 sFDlV~~s~~ll~~~~d--~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+||+|+++.+ +|+.++ ...+|+++.++|||||+|++++....
T Consensus 157 ~~d~v~~~~v-lh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 157 RPAAIMLVGM-LHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp SCCEEEETTT-GGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred CCEEEEEech-hhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 8999999988 555544 67899999999999999999987653
No 98
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.23 E-value=2.1e-11 Score=118.88 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-ceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
...+|||||||+|.++..+++.+ ...++++|.++.+++.|+++ +.. +.+..+|+.. +.+++||+|+++..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~- 134 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANIL- 134 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESC-
T ss_pred CCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCc-
Confidence 34799999999999999998874 34799999999999988765 443 6777777654 45689999999866
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.++ ...+++++.++|||||+++++++..
T Consensus 135 ~~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 135 AEI---LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HHH---HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HHH---HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 332 4679999999999999999987643
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.23 E-value=2.9e-11 Score=120.12 Aligned_cols=98 Identities=20% Similarity=0.124 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHH----HHHHcCCCceEEeecccC----CCCCCCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ----LPYPSLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~----~A~ergl~~~~~~~da~~----Lpfpd~sFDlV~~s 324 (667)
++.+|||||||+|.++..+++... ...|+++|+|+.|++ .|+++ .++.+..+|+.. .+++ ++||+|+|.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 457999999999999999988732 357999999998654 34433 355666667665 3555 799999998
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. . ......++.++.|+|||||+|+++..
T Consensus 134 ~~-~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 IA-Q--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CC-S--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-C--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 32 2 22234569999999999999999853
No 100
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.23 E-value=7.5e-11 Score=116.24 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=78.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||||||+|.++..+++. ...|+++|.++.|++.|+++ +++ +.+..+|+........+||+|++...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 479999999999999999988 35689999999999988765 443 67788887773333357999998764
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
. +.. ++.++.++|||||++++.....
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 2 455 9999999999999999998753
No 101
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.22 E-value=3.2e-11 Score=118.40 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=80.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CceEEeecccCCCC--CCCC-ccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY--PSLS-FDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~Lpf--pd~s-FDlV~~ 323 (667)
..+|||+|||+|.++..++.++. ..|+++|.|+.|++.|+++ ++ ++.+..+|+..+.. ++++ ||+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 37899999999999998877753 4699999999999988764 43 56778888766432 3678 999999
Q ss_pred cccccccccCHHHHHHHH--HhcccCCeEEEEEeCCC
Q 005959 324 ARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 324 s~~ll~~~~d~~~~L~Ei--~RvLKPGG~Lvis~p~~ 358 (667)
... ++ ..+...++.++ .++|||||.++++....
T Consensus 132 ~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 876 44 34556788888 77899999999987643
No 102
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.22 E-value=2.8e-11 Score=122.42 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=79.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----------CC-CceEEeecccC-CC--CCCCCc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GL-PAMIGSFASKQ-LP--YPSLSF 318 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----------gl-~~~~~~~da~~-Lp--fpd~sF 318 (667)
...+|||||||+|.++..|++.. ....++|+|+|+.|++.|+++ +. ++.+..+|+.. ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34689999999999999999873 446799999999999887642 22 56788888876 77 888999
Q ss_pred cEEEecccccccccC--------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 319 DMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 319 DlV~~s~~ll~~~~d--------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
|.|++.+. ..|... ...+++++.++|||||.|++....
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99998754 333211 146999999999999999998764
No 103
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.22 E-value=1.3e-10 Score=110.38 Aligned_cols=96 Identities=20% Similarity=0.263 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCC-CCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPS-LSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd-~sFDlV~~s~~ 326 (667)
..+|||+|||+|.++..+++.+ ..++++|.++.+++.++++ +. .+.+..++... ++++ ++||+|++..+
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCc
Confidence 4799999999999999999885 5799999999999988764 33 45666667655 3333 58999999866
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. .+...++.++.++|+|||.+++..+.
T Consensus 110 ~----~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 110 G----GELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp T----TCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred h----HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2 24578999999999999999998874
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.21 E-value=2e-11 Score=133.09 Aligned_cols=119 Identities=13% Similarity=0.129 Sum_probs=92.0
Q ss_pred hhhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----------C
Q 005959 230 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------G 298 (667)
Q Consensus 230 ~~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-----------g 298 (667)
....+..+.+.+...++ .+|||||||+|.++..++... ....++|+|+++.+++.|++. +
T Consensus 158 ~~~~i~~il~~l~l~~g--------d~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDD--------DLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp HHHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 35555566666655444 899999999999999998652 233599999999998877642 3
Q ss_pred ---CCceEEeecccCCCCCC--CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 299 ---LPAMIGSFASKQLPYPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 299 ---l~~~~~~~da~~Lpfpd--~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.++.+.++|+..+|+++ ..||+|+++.. + +.++....|.++.|+|||||.|++.++...
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-A-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-T-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEccc-c-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 35678899999988864 47999999865 3 346677899999999999999999877554
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.21 E-value=4.5e-11 Score=120.16 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCC---CCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfp---d~sFDlV~~s 324 (667)
...+|||||||+|.++..++... ....|+++|.++.|++.|+++ ++ ++.+..+++..++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 45799999999999999998642 245799999999999888653 44 477888888888764 6799999997
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. .+...++.++.++|||||++++...
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 53 5578899999999999999998753
No 106
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.20 E-value=7.5e-11 Score=116.82 Aligned_cols=102 Identities=17% Similarity=0.067 Sum_probs=79.9
Q ss_pred CCCEEEEeCCC-CchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCC-CCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCG-tG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~L-pfpd~sFDlV~~s~~ 326 (667)
+..+|||+||| +|.++..+++.. ...|+++|.++.+++.|+++ ++++.+..+|+..+ ++++++||+|+++..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 35799999999 999999999873 45799999999999888754 55677888886433 466789999999855
Q ss_pred ccccccC-------------------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQK-------------------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d-------------------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++...+ ...++.++.++|||||++++..+.
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 133 -YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp -CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred -CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 322211 367999999999999999998664
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.20 E-value=6.7e-11 Score=115.57 Aligned_cols=94 Identities=18% Similarity=0.080 Sum_probs=78.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+ ..++++|.++.+++.|+++ +. ++.+..+|....+.++++||+|++..++.
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchh
Confidence 4799999999999999999883 5689999999999988765 33 46778888877777778999999997744
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+ ..+ ++.++|||||++++..+.
T Consensus 155 ~-~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 155 E-IPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp S-CCT------HHHHTEEEEEEEEEEECS
T ss_pred h-hhH------HHHHhcccCcEEEEEEcC
Confidence 4 433 689999999999999875
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.19 E-value=4.6e-11 Score=127.58 Aligned_cols=99 Identities=18% Similarity=0.219 Sum_probs=81.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.+ ...|+++|.| +|++.|+++ ++. +.+..+++..+++++++||+|++..+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 34799999999999999999985 3479999999 588877653 443 67889999999999999999999653
Q ss_pred c--cccccCHHHHHHHHHhcccCCeEEEEE
Q 005959 327 G--VDWDQKDGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 327 l--l~~~~d~~~~L~Ei~RvLKPGG~Lvis 354 (667)
. ++...+...++.++.|+|||||++++.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 2 333466788999999999999999743
No 109
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=3.3e-11 Score=118.56 Aligned_cols=101 Identities=19% Similarity=0.182 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHH----HH----cCC-CceEEeecccCCCCCCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT----LE----RGL-PAMIGSFASKQLPYPSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A----~e----rgl-~~~~~~~da~~Lpfpd~sFDlV~~s 324 (667)
..+|||||||+|.++..|++.. +...|+++|+|+.|++.+ ++ .+. ++.+.++|+..+|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 4789999999999999999873 346799999999988753 21 233 567889999999998877 887744
Q ss_pred ccc--c--ccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCG--V--DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~l--l--~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
... . |+.+++..+++++.|+|||||.++++..
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 321 1 2445667899999999999999999753
No 110
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.19 E-value=5.6e-11 Score=120.66 Aligned_cols=104 Identities=14% Similarity=0.032 Sum_probs=80.4
Q ss_pred cccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecc---cCCCCCCCCccEEEe
Q 005959 250 ILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS---KQLPYPSLSFDMLHC 323 (667)
Q Consensus 250 ~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da---~~Lpfpd~sFDlV~~ 323 (667)
...++.+|||+|||+|.++..+++.-.+...|+++|+++.|++.++++. .++..+.++. ...++..++||+|++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 3446689999999999999999987334567999999999998887653 2344444443 345677789999997
Q ss_pred cccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 324 s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. .+.++...++.++.++|||||+++++..
T Consensus 154 d~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 154 DV---AQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp CC---CCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ec---cCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 63 3345667899999999999999999864
No 111
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.19 E-value=7.5e-11 Score=116.91 Aligned_cols=94 Identities=13% Similarity=0.027 Sum_probs=76.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CceEEeecccCCCCCCCCccEEEeccccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~ 330 (667)
..+|||||||+|.++..+++.+ ..++++|.++.+++.++++.. ++.+..+|+.....++++||+|++..++.+.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHH
Confidence 4799999999999999999885 579999999999999987632 5677777876633346799999999874443
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 331 DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 331 ~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. .++.++|||||++++..+.
T Consensus 148 ~-------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 L-------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp C-------HHHHHTEEEEEEEEEEECS
T ss_pred H-------HHHHHHcCCCcEEEEEEcC
Confidence 2 3789999999999999764
No 112
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.18 E-value=4.7e-11 Score=127.15 Aligned_cols=96 Identities=16% Similarity=0.248 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||||||+|.++..+++.+ ...|+++|.++ |++.|+++ +. .+.+..+++..+++++++||+|++..+.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4799999999999999999885 34799999996 88887654 33 5678888999999998899999997631
Q ss_pred --cccccCHHHHHHHHHhcccCCeEEE
Q 005959 328 --VDWDQKDGILLLEVDRVLKPGGYFV 352 (667)
Q Consensus 328 --l~~~~d~~~~L~Ei~RvLKPGG~Lv 352 (667)
+.+..+...++.++.++|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3334456789999999999999998
No 113
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.17 E-value=1e-10 Score=122.52 Aligned_cols=130 Identities=12% Similarity=0.147 Sum_probs=86.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceE-EeecccCCC---CCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLP---YPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~-~~~da~~Lp---fpd~sFDlV~~s~~ll 328 (667)
...+|||||||||.++..|++++ ...|+++|+++.|++.+.++...+.. ...++..++ ++..+||+|+|..+++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 34799999999999999999885 34699999999999886654433322 122333333 3445699999986633
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCCCChh--------hhhhhHH-HHhhhhhhhhhhhccceEEe
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQ--------AFLRNKE-NQKRWNFVRDFVENLCWELV 388 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~--------~~lr~~e-~~~~W~~ie~l~~~~~W~ll 388 (667)
+ ...+|.++.|+|||||.|++...+.... +..++.. ....-+.+..+....+|...
T Consensus 163 s----l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 163 S----LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp C----GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred h----HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 2 3679999999999999999974221110 1111111 12233555666677777654
No 114
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=4.8e-11 Score=126.90 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=80.1
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~ 330 (667)
.+|||||||+|.++..+++.+ ....++++|.|+.|++.++++ ++...+...|... +.+++||+|+|+.. +|+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Iv~~~~-~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISNPP-FHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEECCC-CCS
T ss_pred CeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--cccCCeeEEEECCC-ccc
Confidence 689999999999999999875 234789999999999888764 5566676666654 34679999999987 443
Q ss_pred -----ccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 331 -----DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 331 -----~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
..+...+++++.++|||||.+++..+..
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2344689999999999999999987643
No 115
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.17 E-value=1.3e-10 Score=114.20 Aligned_cols=100 Identities=12% Similarity=0.025 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccC-CCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~-Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++++. ..|+++|.++.|++.|+++ ++ ++.+.++|+.. ++..+++||+|++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 37999999999999998887763 3799999999999988754 33 56788888766 5667789999999865
Q ss_pred cccccCHHHHHHHHHh--cccCCeEEEEEeCC
Q 005959 328 VDWDQKDGILLLEVDR--VLKPGGYFVWTSPL 357 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~R--vLKPGG~Lvis~p~ 357 (667)
++ ......++.++.+ +|+|||+++++...
T Consensus 132 ~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 44 3455678888865 69999999998763
No 116
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.16 E-value=9.2e-11 Score=125.59 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=85.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC--CCCCCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL--PYPSLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L--pfpd~sFDlV~~s 324 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.|+++ ++ .+.+..+|+... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 35799999999999999999873 4467999999 9999988865 32 467788887775 576 789999999
Q ss_pred ccccccccCH-HHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 325 RCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 325 ~~ll~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.++++|.++. ..+|++++++|||||++++.++....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 9866665332 57899999999999999999876543
No 117
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.16 E-value=1.2e-10 Score=122.10 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=84.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||||||+|.++..+++.. +...++++|.+ .+++.|+++ ++ .+.+..+|+...+++++ ||+|++..+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 34799999999999999999873 34579999999 999888765 33 36778888887777764 999999988
Q ss_pred ccccc-cCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ll~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
++++. ++...+|+++.++|+|||++++.++...
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 66654 2336899999999999999999987654
No 118
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.15 E-value=4.4e-11 Score=112.17 Aligned_cols=100 Identities=23% Similarity=0.223 Sum_probs=77.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccC-CCC---CCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQ-LPY---PSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~-Lpf---pd~sFDlV~~s~ 325 (667)
..+|||+|||+|.++..+++.+.. ++++|.++.+++.|+++ ++++.+..+|+.. ++. .+++||+|++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 378999999999999999998643 89999999999888764 4467777777665 221 134899999986
Q ss_pred cccccccCHHHHHHHHH--hcccCCeEEEEEeCCCC
Q 005959 326 CGVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~--RvLKPGG~Lvis~p~~~ 359 (667)
. ++ .+...++..+. ++|||||.++++.+...
T Consensus 119 ~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 P-YA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp C-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred C-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 6 33 34456777777 99999999999887543
No 119
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.15 E-value=8.9e-11 Score=111.86 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=85.9
Q ss_pred hhhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceE
Q 005959 230 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMI 303 (667)
Q Consensus 230 ~~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~ 303 (667)
...+.+.+.+.+... ....+|||+|||+|.++..+++.+ ...++++|.++.+++.|+++ ++ ++.+
T Consensus 28 ~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 98 (187)
T 2fhp_A 28 TDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKFEV 98 (187)
T ss_dssp CHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEE
T ss_pred HHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcceEE
Confidence 344555555555311 134799999999999999988864 35799999999999888754 33 3667
Q ss_pred EeecccCC----CCCCCCccEEEecccccccccCHHHHHHHH--HhcccCCeEEEEEeCCC
Q 005959 304 GSFASKQL----PYPSLSFDMLHCARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 304 ~~~da~~L----pfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei--~RvLKPGG~Lvis~p~~ 358 (667)
..+|+... ++++++||+|++... ++ .......+..+ .++|+|||++++..+..
T Consensus 99 ~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 99 RKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 77776552 233679999999866 33 24456677777 99999999999987754
No 120
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.15 E-value=1.4e-10 Score=122.18 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=83.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.. +...++++|. +.+++.|+++ ++ .+.+..+|+. .+++. +||+|++..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 45799999999999999999863 4467899999 9999888764 33 4677778875 46665 8999999999
Q ss_pred ccccccC-HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 327 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 327 ll~~~~d-~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
+++|.++ ..++|++++++|||||++++.++....
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 6666533 368999999999999999999876543
No 121
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=1.4e-10 Score=125.26 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=78.5
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC----CceEEeecccCCCCCCCCccEEEeccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl----~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
.+|||+|||+|.++..+++.+ +...|+++|.++.|++.|+++ ++ ++.+...|... ++++++||+|+|+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 799999999999999999884 346799999999999888754 32 35567777665 577789999999977
Q ss_pred ccccc----cC-HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWD----QK-DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~----~d-~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+|.. .. ...++.++.++|||||.++++...
T Consensus 302 -fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 302 -FHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp -C-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred -cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4422 12 136899999999999999998653
No 122
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.15 E-value=1.9e-10 Score=119.38 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=77.1
Q ss_pred CCEEEEeCCCCch----HHHHHhhc-CC-c-eeEEEEecCCHHHHHHHHHcC----------------------------
Q 005959 254 VRTILDIGCGYGS----FGAHLFSK-EL-L-TMCIANYEASGSQVQLTLERG---------------------------- 298 (667)
Q Consensus 254 ~~~VLDIGCGtG~----~t~~La~~-g~-~-~~sV~gvD~S~~ml~~A~erg---------------------------- 298 (667)
..+|||+|||+|. ++..|++. +. . ...|+|+|+|+.|++.|++..
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999998 55556654 21 1 257999999999999998641
Q ss_pred --------CCceEEeecccCCCCC-CCCccEEEecccccccccCH--HHHHHHHHhcccCCeEEEEE
Q 005959 299 --------LPAMIGSFASKQLPYP-SLSFDMLHCARCGVDWDQKD--GILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 299 --------l~~~~~~~da~~Lpfp-d~sFDlV~~s~~ll~~~~d~--~~~L~Ei~RvLKPGG~Lvis 354 (667)
..+.|.+.|....|++ .++||+|+|.++++++. +. .+++.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~-~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFD-KTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSC-HHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCC-HHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1355677787776665 57899999998855553 33 67999999999999999984
No 123
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=2.2e-11 Score=118.06 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=64.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCceEEeecccCCCCCC-----CCccEEEe
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQLPYPS-----LSFDMLHC 323 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~da~~Lpfpd-----~sFDlV~~ 323 (667)
...+|||+|||+|.++..+++.+ ....++++|+++.+++.|+++. .++.+.++|+.. ++++ ++||+|+|
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 34799999999999999999884 3467999999999999887652 245566667665 5665 89999999
Q ss_pred cccccccc------cC-------------------HHHHHHHHHhcccCCeEEEEEeC
Q 005959 324 ARCGVDWD------QK-------------------DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 324 s~~ll~~~------~d-------------------~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
+...+... +. ...+++++.++|||||++++.+.
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 74422111 00 05688999999999999444443
No 124
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.14 E-value=4.7e-11 Score=111.37 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=78.4
Q ss_pred CCEEEEeCCCCchHHHHHhhc-CCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCC--------CCCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~-g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lp--------fpd~sFDlV~~s 324 (667)
..+|||+|||+|.++..+++. + ....++++|.++ +++. .++.+..+|+...+ +++++||+|++.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~-~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIG-GKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-TTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhC-CCCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 479999999999999999887 3 235799999998 7543 35667777887776 778899999998
Q ss_pred ccccccccCH-----------HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 RCGVDWDQKD-----------GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 ~~ll~~~~d~-----------~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.. +++..+. ..++.++.++|+|||.+++.++...
T Consensus 96 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 96 MA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred CC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 66 4444443 5799999999999999999887554
No 125
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.14 E-value=1.9e-10 Score=111.92 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=78.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.. ....++++|.++.+++.++++ ++ ++.+..+++..++ ++++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4799999999999999998762 345799999999999888754 44 3677778877766 4578999998642
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.+...++.++.++|+|||++++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4567899999999999999999865
No 126
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.14 E-value=1.8e-10 Score=117.47 Aligned_cols=98 Identities=19% Similarity=0.104 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCC---CCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfp---d~sFDlV~~s 324 (667)
...+|||||||+|..+..++... ....|+++|.++.+++.|+++ ++ ++.+..++++.++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45799999999999999998763 346799999999999888754 54 477888888887753 4799999997
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.+ .+...++.++.++|||||+|++...
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 43 3467899999999999999998664
No 127
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.13 E-value=8.8e-11 Score=111.61 Aligned_cols=101 Identities=11% Similarity=0.066 Sum_probs=77.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccC-CCCCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-Lpfpd~sFDlV~~s~~ 326 (667)
..+|||+|||+|.++..+++.+ ...++++|.++.+++.|+++ ++ .+.+..+|+.. ++..+++||+|++...
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 4799999999999999999874 35799999999999988764 33 35677777665 4444567999999855
Q ss_pred ccccccCHHHHHHHHH--hcccCCeEEEEEeCCC
Q 005959 327 GVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~--RvLKPGG~Lvis~p~~ 358 (667)
++. .....++..+. ++|+|||++++.....
T Consensus 110 -~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 -YAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp -SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred -CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 322 23456777776 9999999999988754
No 128
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.13 E-value=6.1e-11 Score=119.07 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=71.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCC-HHHHHHH---HHc----CC-CceEEeecccCCCCC-CCCccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEAS-GSQVQLT---LER----GL-PAMIGSFASKQLPYP-SLSFDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S-~~ml~~A---~er----gl-~~~~~~~da~~Lpfp-d~sFDlV~~ 323 (667)
..+|||||||+|.++..|+++. ....|+|+|+| +.|++.| +++ ++ ++.+..+++..+|.. .+.||.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 4789999999999999998653 35679999999 7777776 432 43 467888888888632 134555544
Q ss_pred cccc----cccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 324 ARCG----VDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 324 s~~l----l~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
++.. .+...+...+|.++.|+|||||+|++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 4320 1111233568999999999999999944
No 129
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.12 E-value=1.3e-10 Score=115.07 Aligned_cols=103 Identities=18% Similarity=0.183 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccC-CCCC-----CCCccEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYP-----SLSFDML 321 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-Lpfp-----d~sFDlV 321 (667)
+.+|||||||+|..+..+++.-.....|+++|.++.+++.|+++ ++ .+.+..+|+.. ++.. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 47999999999999999998522246799999999999988764 44 36677777644 3322 2689999
Q ss_pred EecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 322 ~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++... .+...+...++.++ ++|||||++++.+...
T Consensus 139 ~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 139 FLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EECSC-GGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEcCC-cccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 99865 33333344577777 9999999999987653
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.12 E-value=2.1e-10 Score=115.31 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=81.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----C-CCceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-----g-l~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++.-.+...++++|.++.+++.|+++ + .++.+..+|+...++++++||+|++.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~--- 173 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD--- 173 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE---
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC---
Confidence 47999999999999999998711235799999999999988765 4 34677888888888888899999984
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+++..++.++.++|+|||++++.++..
T Consensus 174 ---~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 174 ---LMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp ---SSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred ---CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 2455679999999999999999998753
No 131
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.12 E-value=1.8e-10 Score=117.59 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=81.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----C---CCceEEeecccCCCCCCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G---LPAMIGSFASKQLPYPSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-----g---l~~~~~~~da~~Lpfpd~sFDlV~~s~ 325 (667)
..+|||+|||+|.++..+++.......++++|.++.+++.|+++ + .++.+..+|+...++++++||+|++..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM 179 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC
Confidence 37999999999999999998521235799999999999888765 3 356778888888888888999999842
Q ss_pred cccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++..++.++.++|+|||++++..+..
T Consensus 180 ------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 180 ------LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 345579999999999999999998853
No 132
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.12 E-value=1e-10 Score=126.17 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=80.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++++. ..|+++|.| .|++.|+++ ++. +.+..+++..++++ ++||+|+|...
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 457999999999999999999863 379999999 999887654 443 67888999999888 79999999654
Q ss_pred cccc--ccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 327 GVDW--DQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~--~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.+.. ......++.++.++|||||+++++..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 2222 24567899999999999999986543
No 133
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.12 E-value=5.3e-11 Score=117.32 Aligned_cols=100 Identities=10% Similarity=0.229 Sum_probs=77.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+.+|||||||+|.++..++.... ...++++|+++.|++.++++ |+...+...+.... .+.++||+|.+..+ +
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~-L 125 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKM-L 125 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETC-H
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhH-H
Confidence 357999999999999999977643 34899999999999988754 55534444454333 45678999999988 5
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
|+.++.+..+.++.+.|+|||+||-..
T Consensus 126 HlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 555666677779999999999988655
No 134
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.12 E-value=1.8e-10 Score=121.06 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=84.5
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEee
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 306 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~ 306 (667)
.....+.+.+...+ +.+|||||||+|.++..+++.+.....|+++|.++.+++.|+++ ++ ++.+..+
T Consensus 62 ~~~~~l~~~l~~~~--------~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWVGLDK--------GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHTTCCT--------TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCC--------cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 34445555555433 37999999999999999998753335699999999999988765 43 3677788
Q ss_pred cccCCCCCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 307 ASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 307 da~~Lpfpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|....+.++++||+|++..++.+. . .++.++|||||++++...
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~-~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEV-P------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCC-C------HHHHHHEEEEEEEEEEBC
T ss_pred ChhhccccCCCeEEEEEcCCHHHH-H------HHHHHhcCCCcEEEEEEC
Confidence 887766566899999999874443 2 578899999999999864
No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.11 E-value=2.5e-10 Score=120.76 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=85.2
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEE
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 304 (667)
..|.+.+.+.+.... ..+|||||||+|.++..+++.+ ...|+++|.+ .|++.|+++ ++ .+.+.
T Consensus 24 ~~y~~ai~~~~~~~~--------~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~ 92 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFK--------DKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNGFSDKITLL 92 (328)
T ss_dssp HHHHHHHHHHHHHHT--------TCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhhHhhcC--------CCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEE
Confidence 344455544444333 3799999999999999999875 3479999999 588877654 43 36778
Q ss_pred eecccCCCCCCCCccEEEecccc--cccccCHHHHHHHHHhcccCCeEEEE
Q 005959 305 SFASKQLPYPSLSFDMLHCARCG--VDWDQKDGILLLEVDRVLKPGGYFVW 353 (667)
Q Consensus 305 ~~da~~Lpfpd~sFDlV~~s~~l--l~~~~d~~~~L~Ei~RvLKPGG~Lvi 353 (667)
.+++..+++++++||+|+|.... +........++.++.++|||||.++.
T Consensus 93 ~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 93 RGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88999999888899999998532 22335567899999999999999984
No 136
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.11 E-value=2.5e-10 Score=117.23 Aligned_cols=98 Identities=11% Similarity=0.134 Sum_probs=80.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----CC-CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----GL-PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||+|||+|.++..+++.-.....++++|.++.+++.|+++ +. ++.+..+|+.. ++++++||+|++.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~-- 186 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD-- 186 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC--
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc--
Confidence 347999999999999999998611235799999999999988765 33 46777788776 6777899999983
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.+++..++.++.++|||||++++.++.
T Consensus 187 ----~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 187 ----IPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp ----CSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 245668999999999999999999874
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.11 E-value=2.6e-10 Score=116.01 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCC--CCCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP--YPSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lp--fpd~sFDlV~~s~ 325 (667)
..+|||+|||+|.++..+++++. ..|+++|+++.+++.|+++ ++ .+.+..+|+..++ +++++||+|+|+.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 47999999999999999998853 2799999999999988764 44 3678888887776 5678999999974
Q ss_pred ccccc----c---------------cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CGVDW----D---------------QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~ll~~----~---------------~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
..+.. . .+...++.++.++|||||+|++..+.
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 42221 0 12356999999999999999997653
No 138
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.11 E-value=2.5e-10 Score=111.82 Aligned_cols=97 Identities=16% Similarity=0.089 Sum_probs=75.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||||||+|.++..+++.+.....++++|.++.+++.++++ +. ++.+..++.......+++||+|++..++.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGP 157 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchH
Confidence 47999999999999999998742225799999999999988765 33 35666667643222367899999998744
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.. .++.++|||||.+++..+.
T Consensus 158 ~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 158 KIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SCC-------HHHHHTEEEEEEEEEEESS
T ss_pred HHH-------HHHHHHcCCCcEEEEEECC
Confidence 432 4889999999999998764
No 139
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.11 E-value=2.8e-10 Score=113.64 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=75.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccC----CCCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQ----LPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~----Lpfpd~sFDlV~~s~ 325 (667)
+..+|||||||+|.++..+++... ...|+++|.++.|++.++++. .++.+..+|+.. ++++ ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe-
Confidence 457999999999999999998721 357999999999998887652 346677778877 7777 789999933
Q ss_pred cccccccCH---HHHHHHHHhcccCCeEEEEE
Q 005959 326 CGVDWDQKD---GILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 326 ~ll~~~~d~---~~~L~Ei~RvLKPGG~Lvis 354 (667)
.+++ ..++.++.++|||||+++++
T Consensus 151 -----~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 -----VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -----CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 2233 67899999999999999997
No 140
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.11 E-value=8.8e-11 Score=118.62 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=79.4
Q ss_pred CCEEEEeCCCCchHHHHHhhc---CCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCC---CCCC-CCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSK---ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~---g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L---pfpd-~sFDlV~~s~~ 326 (667)
+.+|||||||+|..+..|++. ......|+++|.++.|++.|+....++.+.++|+..+ ++.+ .+||+|++...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 379999999999999999886 1234679999999999988764445677888888774 5544 47999998754
Q ss_pred ccccccCHHHHHHHHHh-cccCCeEEEEEeC
Q 005959 327 GVDWDQKDGILLLEVDR-VLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~R-vLKPGG~Lvis~p 356 (667)
| .+...+|.++.| +|||||+|++.+.
T Consensus 162 --~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 --H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp --C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred --h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 2 356789999998 9999999999876
No 141
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.10 E-value=9.1e-12 Score=124.52 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=79.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++.+ ..|+++|+++.|++.|+++ ++ ++.+.++|+..++ ++++||+|+++..
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~- 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP- 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-
T ss_pred CCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-
Confidence 4799999999999999999985 5689999999999888754 44 5678888888777 6679999999977
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEE
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis 354 (667)
+++..+....+.++.++|+|||++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 555555555788999999999997764
No 142
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.10 E-value=3.6e-11 Score=121.56 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=65.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEE-eecccCCC---CCCCCccEEEecccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP---YPSLSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~-~~da~~Lp---fpd~sFDlV~~s~~ll~ 329 (667)
..+|||||||+|.++..|++++. ..|+++|+|+.|++.|+++....... ..+...+. ++...||.+.+..++.+
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 46999999999999999999853 37999999999999987765432211 01111111 11112444444333222
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 330 WDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 330 ~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
. ..+|.++.|+|||||.|++..
T Consensus 116 l----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 116 L----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp G----GGTHHHHHHHSCTTCEEEEEE
T ss_pred H----HHHHHHHHHhccCCCEEEEEE
Confidence 1 579999999999999999974
No 143
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.09 E-value=4.8e-10 Score=120.28 Aligned_cols=102 Identities=24% Similarity=0.246 Sum_probs=83.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.|+++ ++ .+.+..+|+. .+++. .||+|++..+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred cCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 45899999999999999999873 4567899999 9999888764 33 4677888876 56776 8999999999
Q ss_pred ccccccCHH--HHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 GVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ll~~~~d~~--~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+++|. +.. ++|+++.++|||||++++.++...
T Consensus 278 lh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 278 LHDWD-DDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp GGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred hccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 65554 443 799999999999999999886554
No 144
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.09 E-value=2.4e-10 Score=115.13 Aligned_cols=98 Identities=20% Similarity=0.240 Sum_probs=79.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
+.+|||+|||+|.++..+++.-.+...++++|.++.+++.|+++ ++. +.+..+|+... +++++||+|++..
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 47999999999999999998711346799999999999988765 443 67777787654 7788999999852
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++..++.++.++|+|||++++..+..
T Consensus 171 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 171 ----PQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 355679999999999999999988753
No 145
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.09 E-value=3.9e-11 Score=130.41 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=80.4
Q ss_pred CCCEEEEeCCC------CchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCC------CCCccE
Q 005959 253 GVRTILDIGCG------YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP------SLSFDM 320 (667)
Q Consensus 253 ~~~~VLDIGCG------tG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfp------d~sFDl 320 (667)
.+.+||||||| +|..+..+++..++...|+++|+|+.|. ....++.+.++|+..+||. +++||+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 35799999999 7777777776533456899999999984 2345678899999999887 789999
Q ss_pred EEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 321 V~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
|+|..+ |+..+...+|+++.|+|||||+|++.+..
T Consensus 292 Visdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999743 44566788999999999999999999865
No 146
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.09 E-value=5.6e-11 Score=113.24 Aligned_cols=87 Identities=20% Similarity=0.174 Sum_probs=73.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CceEEeecccCCCC---CCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPY---PSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~Lpf---pd~sFDlV~~s~~ll 328 (667)
++.+|||||||. +.+|.|+.|++.|+++.. .+.+.++++..+++ ++++||+|+|+.+ +
T Consensus 12 ~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~-l 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV-P 73 (176)
T ss_dssp TTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCS-T
T ss_pred CCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECCh-h
Confidence 458999999996 128999999999988742 47788889999887 8899999999987 5
Q ss_pred ccc-cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DWD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~~-~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
|+. ++...+|++++|+|||||+|++..+.
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 555 77889999999999999999997653
No 147
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.09 E-value=2.3e-10 Score=118.26 Aligned_cols=122 Identities=7% Similarity=0.115 Sum_probs=90.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++.+.. .|+++|.++.+++.|+++ ++. +.+.++|+..++. +++||+|++...
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 479999999999999999998643 699999999999888754 443 5688889888877 679999998643
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEee
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~ 389 (667)
.....++.++.++|||||++++.+....... .....+.+....+..+|+...
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc------cccHHHHHHHHHHHcCCeeEE
Confidence 2335789999999999999999887532110 012233445556666666543
No 148
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.09 E-value=2.4e-10 Score=113.97 Aligned_cols=100 Identities=16% Similarity=0.116 Sum_probs=75.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHH----HHHHcCCCceEEeecccC---CCCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ---LPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~----~A~ergl~~~~~~~da~~---Lpfpd~sFDlV~~s~ 325 (667)
...+|||+|||+|.++..|++.......++++|.++.|++ .|+++ .++.+..+|+.. +++.+++||+|++..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 3579999999999999999987212357899999987654 44443 466777788776 556678999999964
Q ss_pred cccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
. ..+....++.++.++|||||+++++..
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 3 122224568899999999999999754
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.08 E-value=5e-10 Score=113.50 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=78.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccC-CCCC--CCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYP--SLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-Lpfp--d~sFDlV~~s 324 (667)
+.+|||||||+|..+..+++.......|+++|.++.+++.|+++ ++ ++.+..+|+.. ++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 47999999999999999998732246799999999999988765 44 36677777655 4432 3489999986
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.. ..+...++.++.++|||||++++.+..
T Consensus 144 ~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 144 AD----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SC----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred Cc----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 42 344567999999999999999998764
No 150
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.08 E-value=2.2e-10 Score=122.21 Aligned_cols=113 Identities=20% Similarity=0.178 Sum_probs=85.8
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEE
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 304 (667)
..|.+.+.+.+... +..+|||||||+|.++..+++.+ ...|+++|.++ |++.|+++ ++ .+.+.
T Consensus 36 ~~y~~~i~~~l~~~--------~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 36 GTYQRAILQNHTDF--------KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp HHHHHHHHHTGGGT--------TTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhccccC--------CcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEE
Confidence 34445555544433 34799999999999999999875 34799999996 88777653 43 46778
Q ss_pred eecccCCCCCCCCccEEEecccccccc-cCHHHHHHHHHhcccCCeEEEEEe
Q 005959 305 SFASKQLPYPSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 305 ~~da~~Lpfpd~sFDlV~~s~~ll~~~-~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
.+++..++++ ++||+|++....+|+. +.....+.++.++|||||.+++..
T Consensus 105 ~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 105 PGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 8888888876 5899999997756655 344678889999999999999654
No 151
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.08 E-value=3.8e-10 Score=113.01 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=79.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-C-CCCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-p-fpd~sFDlV~~s~ 325 (667)
..+|||||||+|.++..|++.. ....|+++|.++.+++.|+++ ++ ++.+..+++... + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 4799999999999999999842 356799999999999988764 43 467787887553 3 3368999999764
Q ss_pred cccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. ..+...++.++.++|||||+|++.+..
T Consensus 151 ~----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 151 A----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp T----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred c----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 3 345678999999999999999986653
No 152
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.07 E-value=5.5e-10 Score=110.42 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=77.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C------CCceEEeecccCCCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----g------l~~~~~~~da~~Lpfpd~sFDlV~ 322 (667)
+..+|||||||+|.++..+++..-....|+++|.++.+++.++++ + .++.+..+|....+.++++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 347999999999999999987621235799999999999888654 2 256677778776666677899999
Q ss_pred ecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 323 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 323 ~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.....+ ++.++.++|||||+++++...
T Consensus 157 ~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAAAPV-------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSBBSS-------CCHHHHHTEEEEEEEEEEESC
T ss_pred ECCchHH-------HHHHHHHhcCCCcEEEEEEec
Confidence 9876333 346889999999999998764
No 153
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.07 E-value=4.2e-10 Score=119.98 Aligned_cols=100 Identities=23% Similarity=0.336 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|+.. +++. .||+|++..+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 35799999999999999999874 3467899999 9999988764 33 46777778754 4554 4999999998
Q ss_pred ccccccCH-HHHHHHHHhcccCCeEEEEEeC
Q 005959 327 GVDWDQKD-GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
++++.+.. ..+|+++.++|||||++++.++
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 66654322 4799999999999999999987
No 154
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=4.6e-10 Score=114.79 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCC---------ceEEeecccCC-------CCCCCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP---------AMIGSFASKQL-------PYPSLS 317 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~---------~~~~~~da~~L-------pfpd~s 317 (667)
..+|||+|||+|.++..++++. ....|+++|+++.+++.|+++-.. +.+..+|+..+ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4799999999999999999874 346899999999999999875322 56778888776 366789
Q ss_pred ccEEEecccccc----------------c-ccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 318 FDMLHCARCGVD----------------W-DQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 318 FDlV~~s~~ll~----------------~-~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
||+|+|+..... . ......++.++.++|||||+|++..+
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999999833111 1 12356789999999999999999765
No 155
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.07 E-value=4e-10 Score=114.32 Aligned_cols=100 Identities=14% Similarity=-0.000 Sum_probs=73.2
Q ss_pred cCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHH----HHHHHcCCCceEEeecccCCC---CCCCCccEEEec
Q 005959 252 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQV----QLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCA 324 (667)
Q Consensus 252 ~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml----~~A~ergl~~~~~~~da~~Lp---fpd~sFDlV~~s 324 (667)
.++.+|||+|||+|.++..+++.......|+++|.++.|+ +.++++ .++.+..+|+.... ...++||+|++.
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEec
Confidence 3568999999999999999988632345799999999885 344444 46677777876532 124689999998
Q ss_pred ccccccccCHHH-HHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGI-LLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~-~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. . ++... ++..+.++|||||+|+++..
T Consensus 154 ~a-~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 154 IA-Q---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CC-C---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-C---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 54 2 34444 45566779999999999854
No 156
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.06 E-value=4.2e-10 Score=113.55 Aligned_cols=102 Identities=23% Similarity=0.230 Sum_probs=78.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc------------CC-CceEEeecccC-CC--CCCCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------------GL-PAMIGSFASKQ-LP--YPSLS 317 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er------------gl-~~~~~~~da~~-Lp--fpd~s 317 (667)
..+|||||||+|.++..+++.+ ....++++|+|+.+++.|+++ ++ ++.+..+|+.. ++ +++++
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4689999999999999999875 345799999999999887643 43 56778888776 66 77889
Q ss_pred ccEEEecccccccccC--------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 318 FDMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 318 FDlV~~s~~ll~~~~d--------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
||.|+.... -.|... ...++.++.++|+|||+|++.+..
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 999986543 122100 047999999999999999997653
No 157
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.06 E-value=6.2e-10 Score=118.50 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=83.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.|+++ ++ .+.+..+|+...++++. |+|++..+
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~v 265 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRI 265 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESC
T ss_pred CCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEech
Confidence 34799999999999999999873 3467899999 9999888764 43 36788888888877754 99999998
Q ss_pred ccccccC-HHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 327 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d-~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++|.++ ...+|+++.++|||||++++.++..
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 6666532 5689999999999999999988654
No 158
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=4e-10 Score=112.81 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=77.0
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---ceEEeecccCC-C-CCCCCccEEEecc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQL-P-YPSLSFDMLHCAR 325 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~L-p-fpd~sFDlV~~s~ 325 (667)
.+|||||||+|..+..|++.-.....|+++|.++.+++.|+++ ++. +.+..+++..+ + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999998622346799999999999888754 443 56777776543 2 4468999999864
Q ss_pred cccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. ..+...++.++.++|||||++++.+..
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3 344567999999999999999996553
No 159
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.05 E-value=2.5e-10 Score=118.52 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=77.8
Q ss_pred CCCEEEEeCCCC--chHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-----CceEEeecccCCC----CC--CCCcc
Q 005959 253 GVRTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLP----YP--SLSFD 319 (667)
Q Consensus 253 ~~~~VLDIGCGt--G~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-----~~~~~~~da~~Lp----fp--d~sFD 319 (667)
+.++|||||||+ +.++..++++-.+...|+++|.|+.|++.|+++-. .+.+.++|+..++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 357999999997 33444554442345689999999999998877521 3568888887752 11 35566
Q ss_pred -----EEEecccccccccC---HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 320 -----MLHCARCGVDWDQK---DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 320 -----lV~~s~~ll~~~~d---~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.|+++.+ +||.++ +..+++++.++|+|||+|++++....
T Consensus 158 ~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 5777665 777766 45799999999999999999987654
No 160
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.05 E-value=5.4e-10 Score=110.56 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCC----ceeEEEEecCCHHHHHHHHHc----C------CCceEEeecccCCC----CCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKEL----LTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLP----YPS 315 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~----~~~sV~gvD~S~~ml~~A~er----g------l~~~~~~~da~~Lp----fpd 315 (667)
..+|||||||+|.++..+++... ....|+++|.++.+++.|+++ + .++.+..+|..... ..+
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 47999999999999999998743 335799999999999988765 3 25677778877765 556
Q ss_pred CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 316 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++||+|++.....+ ++.++.++|||||++++..+.
T Consensus 161 ~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASE-------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSS-------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHH-------HHHHHHHhcCCCcEEEEEEcc
Confidence 78999999876332 347889999999999998763
No 161
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.05 E-value=2.6e-10 Score=116.18 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
..+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++.+.+..++... ++++++||+|+++.. .+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~-~~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLY-AE 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECC-HH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCc-HH
Confidence 47999999999999999998864 799999999999888764 4446666666554 245678999999754 22
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 330 WDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 330 ~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
....++.++.++|||||+++++...
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 2467999999999999999998764
No 162
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.04 E-value=4.8e-10 Score=108.51 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=73.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-eeEEEEecCCHHHHHHHHHcCCCceEEeecccCCC--------------------
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-------------------- 312 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~-~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lp-------------------- 312 (667)
..+|||||||+|.++..++++... ...|+++|.++.+ ....+.+.++|+...+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDY 96 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhHH
Confidence 478999999999999999987321 4679999999831 1124567778887776
Q ss_pred -----CCCCCccEEEecccccccc----cCH-------HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 313 -----YPSLSFDMLHCARCGVDWD----QKD-------GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 313 -----fpd~sFDlV~~s~~ll~~~----~d~-------~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+++++||+|+|..+ .++. .+. ..++.++.++|||||.|++..+..
T Consensus 97 ~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 97 KLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 56789999999865 4442 122 137899999999999999977643
No 163
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.03 E-value=6.8e-10 Score=110.56 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=78.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-CCC--CCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP--SLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-pfp--d~sFDlV~~s 324 (667)
..+|||||||+|.++..+++.. ....|+++|.++.+++.|+++ ++ .+.+..+++... +.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 4799999999999999999873 246799999999999988765 44 366777776653 433 5789999987
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. . .+...++.++.++|||||++++.+.
T Consensus 134 ~~-~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 134 AA-K---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GG-G---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CC-H---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 55 2 3567899999999999999999865
No 164
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.02 E-value=3.7e-10 Score=121.02 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=80.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..++++. ....++++|. +.+++.|++. ..+.+..+|+.. ++++ ||+|++..++++| +
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~-~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNW-S 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGS-C
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccC-C
Confidence 35799999999999999999885 3467889999 8999877653 346778888776 6765 9999999985555 4
Q ss_pred CHH--HHHHHHHhcccCCeEEEEEeCC
Q 005959 333 KDG--ILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 333 d~~--~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.. .+|++++++|||||++++.++.
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 555 8999999999999999998754
No 165
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.02 E-value=7.6e-10 Score=117.49 Aligned_cols=101 Identities=23% Similarity=0.339 Sum_probs=80.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.. ....++++|. +.+++.|+++ ++ .+.+..+|+.. +++. .||+|++..+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred cCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 34799999999999999999874 3467899999 8899888754 34 46777777654 4554 4999999998
Q ss_pred ccccccCH-HHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKD-GILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++++.+.. ..+++++.++|||||++++.++.
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 66654322 47999999999999999999886
No 166
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.02 E-value=5.4e-10 Score=117.41 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=81.5
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------CCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg------l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+|||||||+|.++..++++. +...++++|. +.+++.|+++- ..+.+..+|... +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 799999999999999999873 3457899999 99998887652 246777788766 666 6899999999866
Q ss_pred ccccCH-HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 329 DWDQKD-GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 329 ~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+|.++. ..+++++.++|+|||++++.++..
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 664322 489999999999999999998754
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.02 E-value=6.3e-10 Score=122.41 Aligned_cols=102 Identities=16% Similarity=0.046 Sum_probs=76.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHH-------HHc----C---CCceEEeecccCC--CC--CC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT-------LER----G---LPAMIGSFASKQL--PY--PS 315 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A-------~er----g---l~~~~~~~da~~L--pf--pd 315 (667)
..+|||||||+|.++..+++.. ....|+|+|.++.+++.| +++ | .++.+..++.... ++ ..
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4799999999999999999862 234699999999998877 443 4 2455655543322 22 24
Q ss_pred CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 316 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++||+|+++..+ +.++...+|.++.++|||||.+++.++..
T Consensus 322 ~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 322 PQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp GGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred CCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 689999997653 34667788999999999999999987543
No 168
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.02 E-value=1.9e-09 Score=113.62 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=80.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccc--
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC-- 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~-- 326 (667)
+.+|||+|||+|..+..+++.......|+++|.++.+++.++++ ++ ++.+.++|+..++..+++||+|++...
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 47999999999999999998632346799999999999887654 55 567788888887765678999998421
Q ss_pred ---ccccccC----------------HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 ---GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ---ll~~~~d----------------~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.++..++ ...+|.++.++|||||++++++....
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 1221111 14789999999999999999887544
No 169
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.02 E-value=1.3e-09 Score=108.73 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=77.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++. ...++++|.++.+++.|+++ ++ ++.+...++....+++++||+|++..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 379999999999999999987 35799999999999988765 33 45677777766543667899999842
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+++..++.++.++|+|||.+++..+.
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35567899999999999999999885
No 170
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.02 E-value=7.1e-10 Score=116.25 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccCCCC--CCCCccEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPY--PSLSFDML 321 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~Lpf--pd~sFDlV 321 (667)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++. ..+.+..+|+..++. ++++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 45799999999999999999762 3467999999999999988653 346677778766554 47899999
Q ss_pred EecccccccccCH----HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 322 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 322 ~~s~~ll~~~~d~----~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++... .++.+.. ..+++++.++|||||++++....+
T Consensus 174 i~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 174 IIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 99754 3332222 579999999999999999987643
No 171
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=5.5e-10 Score=110.19 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCC-C-CC----CCCccEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL-P-YP----SLSFDML 321 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~L-p-fp----d~sFDlV 321 (667)
+.+|||||||+|.++..+++.-.....|+++|.++.+++.|+++ ++. +.+..+++... + +. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 47999999999999999998622246799999999999888765 443 66777776432 2 11 1789999
Q ss_pred EecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... ..+...++.++.++|||||++++.+..
T Consensus 145 ~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 145 YIDAD----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EECSC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 97542 345678999999999999999998765
No 172
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=5.8e-10 Score=119.75 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=82.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.+++. ..+.+..+|+.. |++++ |+|++..++++|.+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 45799999999999999999874 4567899999 8888877654 367788888776 77764 99999999666754
Q ss_pred CH-HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 333 KD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 333 d~-~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+. .++|++++++|||||++++.+....
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 32 4799999999999999999987643
No 173
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.01 E-value=7.4e-10 Score=118.86 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=82.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.|++. ..+.+..+|+.. |++++ |+|++..++++|.+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCH
Confidence 45799999999999999999873 4567899999 8888777654 467788888877 78764 99999999667753
Q ss_pred C-HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 333 K-DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 333 d-~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+ ...+|++++++|||||++++.+....
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3 35799999999999999999987643
No 174
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.00 E-value=9.8e-10 Score=107.68 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccC-CCCCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-Lpfpd~sFDlV~~s~~ 326 (667)
..+|||||||+|..+..+++.......++++|.++.+++.|+++ ++ .+.+..+++.. ++..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 47999999999999999988632246799999999999988754 33 35667777654 355456 999998732
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
..+...++.++.++|||||++++.+.
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 34567899999999999999999764
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.00 E-value=8e-10 Score=111.50 Aligned_cols=104 Identities=15% Similarity=0.017 Sum_probs=76.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC-CceeEEEEecCCHHHHHHHHHc---C----C--C----------------------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER---G----L--P---------------------- 300 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g-~~~~sV~gvD~S~~ml~~A~er---g----l--~---------------------- 300 (667)
...+|||+|||+|.++..+++.. .....|+++|+++.+++.|+++ . + .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 34789999999999999998761 1356799999999999988743 1 1 1
Q ss_pred ---ce-------------EEeecccCCCC-----CCCCccEEEecccccccc--------cCHHHHHHHHHhcccCCeEE
Q 005959 301 ---AM-------------IGSFASKQLPY-----PSLSFDMLHCARCGVDWD--------QKDGILLLEVDRVLKPGGYF 351 (667)
Q Consensus 301 ---~~-------------~~~~da~~Lpf-----pd~sFDlV~~s~~ll~~~--------~d~~~~L~Ei~RvLKPGG~L 351 (667)
+. +.++|+..... ..++||+|+|+...++.. +....++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 33 77777655321 345899999986533322 12347999999999999999
Q ss_pred EEEeC
Q 005959 352 VWTSP 356 (667)
Q Consensus 352 vis~p 356 (667)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99554
No 176
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.00 E-value=5.5e-10 Score=118.73 Aligned_cols=100 Identities=12% Similarity=0.133 Sum_probs=80.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..++++. +...++++|. +.|++.|++.. .+.+..+|+.. ++++ ||+|++..++++| +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~-~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILHNW-T 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGGGS-C
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhccC-C
Confidence 45799999999999999999873 3457999999 99998876542 46777788755 6663 9999999986666 4
Q ss_pred CHH--HHHHHHHhcccC---CeEEEEEeCCCC
Q 005959 333 KDG--ILLLEVDRVLKP---GGYFVWTSPLTN 359 (667)
Q Consensus 333 d~~--~~L~Ei~RvLKP---GG~Lvis~p~~~ 359 (667)
+.. .+|+++.++||| ||++++.++...
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 444 899999999999 999999987543
No 177
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.00 E-value=6.9e-10 Score=117.46 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=82.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCC-CCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lp-fpd~sFDlV~~s~~ 326 (667)
..+|||||||+|.++..++++. +...++++|. +.+++.++++ ++ .+.+..+|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 5899999999999999999873 3467899999 7788877654 33 3667778877765 23457999999998
Q ss_pred ccccccC-HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 327 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 327 ll~~~~d-~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+++|.++ ...+|+++.++|||||++++.++...
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 6666432 36899999999999999999986543
No 178
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.00 E-value=1.2e-09 Score=116.04 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH--cC--CCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE--RG--LPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~e--rg--l~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
...+|||||||+|.++..++++. +...++++|.+ .++..++. .+ ..+.+..+|+. .++| +||+|++..+++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh 258 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILH 258 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGG
T ss_pred CCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhcc
Confidence 35799999999999999999874 45678999994 44441110 12 23667777875 4555 899999999866
Q ss_pred ccccCH-HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 329 DWDQKD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 329 ~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+|.+.. ..+|++++++|||||+|++.+....
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 664322 5899999999999999999987543
No 179
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.00 E-value=8.9e-10 Score=110.15 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=80.6
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEee
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 306 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~ 306 (667)
.....+.+.+...+ ..+|||||||+|.++..+++.+. ..++++|.++.+++.|+++ ++ ++.+..+
T Consensus 78 ~~~~~~~~~l~~~~--------~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 78 HMVAIMLEIANLKP--------GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp HHHHHHHHHHTCCT--------TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCC--------CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 34445555554433 37899999999999999998742 5689999999999988764 33 4566666
Q ss_pred cccCCCCCCC-CccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 307 ASKQLPYPSL-SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 307 da~~Lpfpd~-sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+. ..+++++ .||+|++..++.++. .++.++|||||.+++..+..
T Consensus 148 d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 148 DG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred Cc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEecC
Confidence 75 4556554 499999997744332 37899999999999998743
No 180
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.99 E-value=1.4e-09 Score=107.34 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-C-CC---CCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP---SLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-p-fp---d~sFDlV~ 322 (667)
+.+|||||||+|.++..+++.......++++|.++.+++.|+++ ++ .+.+..+++... + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 47999999999999999998732245799999999999888754 44 356777776442 1 11 25799999
Q ss_pred ecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 323 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 323 ~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+... ......++.++.++|||||++++.+..
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8744 234568999999999999999988764
No 181
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.99 E-value=3.3e-09 Score=108.83 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||+|||+|.++..+++.. ....++++|+|+.+++.|+++ ++ ++.+..+|... ++++++||+|+++...+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCB
T ss_pred CCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCC
Confidence 4689999999999999998652 345799999999999988765 44 46677777655 34467899999984311
Q ss_pred c------------cc------------cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 D------------WD------------QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~------------~~------------~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. +. .....++.++.++|||||++++....
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 1 11 12357899999999999999998653
No 182
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.98 E-value=1.6e-09 Score=111.10 Aligned_cols=97 Identities=22% Similarity=0.179 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..+++.-.+...++++|.++.+++.|+++ ++ .+.+...|+... +++++||+|++..
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV-- 189 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC--
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC--
Confidence 37999999999999999998722345799999999999988765 43 456777777666 6778999999852
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+++..++.++.++|+|||.+++.++.
T Consensus 190 ----~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 190 ----PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp ----SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 45567999999999999999999874
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.98 E-value=1.1e-09 Score=115.80 Aligned_cols=98 Identities=17% Similarity=0.073 Sum_probs=74.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------CCceEEeecccCC--CCCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------LPAMIGSFASKQL--PYPS 315 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------------l~~~~~~~da~~L--pfpd 315 (667)
+.+|||+|||+|.++..+++.......++++|.++.+++.|+++. .++.+..+|+..+ ++++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 379999999999999999987212357999999999999887641 2466777888776 5677
Q ss_pred CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 316 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++||+|++... ++..++.++.++|||||.|++..+.
T Consensus 186 ~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 186 LTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp --EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 88999998632 2334899999999999999998874
No 184
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.98 E-value=1.6e-09 Score=107.26 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=73.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---CCCceEEeecccCCC---CCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---GLPAMIGSFASKQLP---YPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er---gl~~~~~~~da~~Lp---fpd~sFDlV~~s~~ 326 (667)
...+|||+|||+|.++..+++.......++++|.++.|++.++++ ..++.+..+|+.... ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 457999999999999999997621224789999999998777543 235667777776632 12358999998744
Q ss_pred ccccccCH-HHHHHHHHhcccCCeEEEEEe
Q 005959 327 GVDWDQKD-GILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 327 ll~~~~d~-~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
.++. ..++.++.++|||||++++..
T Consensus 153 ----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 ----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2333 345999999999999999983
No 185
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.98 E-value=1.9e-09 Score=112.82 Aligned_cols=102 Identities=18% Similarity=0.149 Sum_probs=75.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------CCceEEeecccC-CCCCCCCccEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQ-LPYPSLSFDML 321 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~-Lpfpd~sFDlV 321 (667)
.+.+|||||||+|.++..++++ .....|+++|+++.+++.|++.. .++.+..+|+.. +...+++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4589999999999999999987 24567999999999999998641 245677777654 34456899999
Q ss_pred EecccccccccCH----HHHHHHHHhcccCCeEEEEEeC
Q 005959 322 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 322 ~~s~~ll~~~~d~----~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
++... .++.+.. ..+++++.++|+|||+|++...
T Consensus 162 i~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99644 3332221 5699999999999999999764
No 186
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.97 E-value=2.6e-09 Score=110.37 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=75.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecC-CHHHHHHHHHcC---------C------CceEEeecccCCC--C-
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA-SGSQVQLTLERG---------L------PAMIGSFASKQLP--Y- 313 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~-S~~ml~~A~erg---------l------~~~~~~~da~~Lp--f- 313 (667)
...+|||||||+|.++..+++.+. ..|+++|. ++.+++.|+++. + ++.+..++..... +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 347999999999999999998753 36999999 899998886542 1 2334433322211 1
Q ss_pred ---CCCCccEEEecccccccccCHHHHHHHHHhccc---C--CeEEEEEeC
Q 005959 314 ---PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLK---P--GGYFVWTSP 356 (667)
Q Consensus 314 ---pd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLK---P--GG~Lvis~p 356 (667)
++++||+|+++.+ +++.++...++.++.++|+ | ||.+++...
T Consensus 157 ~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred hhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 3578999999888 4446677889999999999 9 998877543
No 187
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=2.9e-10 Score=118.09 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=73.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------CceEE--eecccCCCCCCCCccEEEe
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------~~~~~--~~da~~Lpfpd~sFDlV~~ 323 (667)
+..+|||||||+|.++..++++ ..|+++|+++ |+..++++.. ++.+. ++|+..+| +++||+|+|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 3479999999999999999987 3589999998 6544433322 45677 78888776 679999999
Q ss_pred cccccccccC----HH---HHHHHHHhcccCCe--EEEEEeCCC
Q 005959 324 ARCGVDWDQK----DG---ILLLEVDRVLKPGG--YFVWTSPLT 358 (667)
Q Consensus 324 s~~ll~~~~d----~~---~~L~Ei~RvLKPGG--~Lvis~p~~ 358 (667)
..+ ++..+ .. .+|.++.++||||| .|++.++.+
T Consensus 155 d~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 155 DIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp CCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred CCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 865 22211 11 37899999999999 999987763
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.97 E-value=1.5e-09 Score=107.82 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=74.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-----eeEEEEecCCHHHHHHHHHcC----------CCceEEeecccCCCCCC-CC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELL-----TMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQLPYPS-LS 317 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~-----~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~Lpfpd-~s 317 (667)
..+|||||||+|.++..+++..-. ...|+++|.++.+++.|+++. .++.+..+|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 479999999999999999875211 137999999999998887641 256677777766 5554 78
Q ss_pred ccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 318 FDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 318 FDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
||+|++...+.+ . +.++.++|||||++++....
T Consensus 164 fD~I~~~~~~~~-~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAAAPD-T------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSCBSS-C------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCchHH-H------HHHHHHHhcCCCEEEEEEec
Confidence 999999977433 2 26889999999999998764
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.96 E-value=2.1e-09 Score=114.55 Aligned_cols=103 Identities=17% Similarity=0.027 Sum_probs=82.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+|||+|||+|.++..++..+.....++++|+++.|++.|+++ ++ .+.+.++|+..++.+.++||+|+++.. +
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP-y 282 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP-H 282 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC-S
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC-C
Confidence 47899999999999999998642235689999999999988764 44 578889999999888888999999744 2
Q ss_pred cc-c-------cCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 329 DW-D-------QKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 329 ~~-~-------~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.. . .....++.++.++|||||.+++.++.
T Consensus 283 g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 283 GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 21 1 11257899999999999999998873
No 190
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=4.5e-10 Score=115.92 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=71.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------CceEE--eecccCCCCCCCCccEEEe
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------~~~~~--~~da~~Lpfpd~sFDlV~~ 323 (667)
+..+|||||||+|.++..++++ ..|+++|+++ |+..++++.. ++.+. ++|+..++ +++||+|+|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEE
Confidence 3479999999999999999987 3589999998 6433322222 45667 78887766 679999999
Q ss_pred cccccccccCH----H---HHHHHHHhcccCCe--EEEEEeCC
Q 005959 324 ARCGVDWDQKD----G---ILLLEVDRVLKPGG--YFVWTSPL 357 (667)
Q Consensus 324 s~~ll~~~~d~----~---~~L~Ei~RvLKPGG--~Lvis~p~ 357 (667)
..+ ++..+. . .+|.++.++||||| .|++.++.
T Consensus 147 d~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 855 222111 1 37899999999999 99998876
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.96 E-value=5.8e-10 Score=126.68 Aligned_cols=102 Identities=15% Similarity=0.038 Sum_probs=80.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C-CCceEEeecccCC--CCCCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQL--PYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----g-l~~~~~~~da~~L--pfpd~sFDlV~~s~ 325 (667)
.+.+|||||||.|.++..|+++|. .|+|+|.++.+|+.|+.+ + +++.+.+++++++ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 346999999999999999999974 589999999999888643 3 5678888898887 57788999999999
Q ss_pred cccccccCHH--HHHHHHHhcccCCeEEEEEeCCC
Q 005959 326 CGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 326 ~ll~~~~d~~--~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
++.| .+++. ..+..+.+.|+++|..++.....
T Consensus 143 ~~eh-v~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 143 VFHH-IVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp CHHH-HHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred chhc-CCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 8555 44553 34556778888888777665443
No 192
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.95 E-value=4.9e-09 Score=111.67 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccCC-C-CCCCCccEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL-P-YPSLSFDML 321 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~L-p-fpd~sFDlV 321 (667)
.+.+|||||||+|.++..++++. ....|+++|+++.+++.|+++. ..+.+..+|+... + +++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45799999999999999999872 3568999999999999988642 2466777776543 2 346799999
Q ss_pred Eecccccccc--cC--HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWD--QK--DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~--~d--~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... .++. .. ...+++++.++|+|||+|++....
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99643 2221 11 257999999999999999997543
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.94 E-value=2.4e-09 Score=107.23 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=76.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccC-CC--------------
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQ-LP-------------- 312 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~-Lp-------------- 312 (667)
..+|||||||+|.++..+++.......++++|.++.+++.|+++ +.. +.+..+++.. ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 47999999999999999998732245799999999999988765 432 5566666533 12
Q ss_pred CCC--CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 313 YPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 313 fpd--~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|++ ++||+|++... .++...++.++.++|||||++++.+.
T Consensus 141 f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 333 78999998744 24456899999999999999999864
No 194
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.93 E-value=8.3e-09 Score=100.13 Aligned_cols=95 Identities=8% Similarity=0.041 Sum_probs=72.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++..++.+.++|+..++ ++||+|+++..+.++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 34799999999999999999874 34699999999999999887556788888888875 68999999977444332
Q ss_pred C-HHHHHHHHHhcccCCeEEEEE
Q 005959 333 K-DGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 333 d-~~~~L~Ei~RvLKPGG~Lvis 354 (667)
. ...+++++.++| |+.+++.
T Consensus 126 ~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp --CHHHHHHHHHHE--EEEEEEE
T ss_pred chhHHHHHHHHHhc--CcEEEEE
Confidence 1 246899999998 5544444
No 195
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=1.7e-09 Score=120.68 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=77.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++.+ ...|+++|.++ |++.|+++ ++ .+.+..+++..++++ ++||+|+|+..
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred CCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc
Confidence 34799999999999999998864 45799999998 88777653 44 467888888888776 48999999866
Q ss_pred ccccc-cCHHHHHHHHHhcccCCeEEEEE
Q 005959 327 GVDWD-QKDGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 327 ll~~~-~d~~~~L~Ei~RvLKPGG~Lvis 354 (667)
.+++. ++....+.++.++|||||++++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 45544 33356778999999999999853
No 196
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.90 E-value=5.2e-10 Score=113.39 Aligned_cols=100 Identities=7% Similarity=-0.037 Sum_probs=77.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-CCC-----CCCccEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP-----SLSFDML 321 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-pfp-----d~sFDlV 321 (667)
+.+|||||||+|..+..|++.......|+++|.++.+++.|+++ ++ .+.+..+++... +.. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 47999999999999999998632246799999999988665543 44 466777776543 221 4789999
Q ss_pred EecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... ..+...++.++.++|||||++++.+..
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 98743 345567999999999999999997654
No 197
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.90 E-value=2.9e-09 Score=102.44 Aligned_cols=99 Identities=16% Similarity=0.067 Sum_probs=70.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCce--------eEEEEecCCHHHHHHHHHcCCCceEE-eecccCCC--------CCCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLT--------MCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP--------YPSL 316 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~--------~sV~gvD~S~~ml~~A~ergl~~~~~-~~da~~Lp--------fpd~ 316 (667)
..+|||||||+|.++..++++.... ..|+++|.++.+ ....+.+. .+|+...+ ++++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 4799999999999999999872111 579999999732 01234566 66655433 3456
Q ss_pred CccEEEecccc---cccccCH-------HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 317 SFDMLHCARCG---VDWDQKD-------GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 317 sFDlV~~s~~l---l~~~~d~-------~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+||+|+|..+. .++..+. ..++.++.++|||||.|++.++..
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 89999996531 1222222 378999999999999999987743
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.90 E-value=3.6e-09 Score=106.05 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeeccc----CCCCCC--CCccEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASK----QLPYPS--LSFDML 321 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~----~Lpfpd--~sFDlV 321 (667)
+.+|||||||+|..+..+++.......++++|.++.+++.|+++ ++ .+.+..+++. .++..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 47999999999999999998632245799999999999988754 44 3556666643 233444 789999
Q ss_pred EecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... ..+...++.++.++|+|||++++.+..
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 98743 345578999999999999999998654
No 199
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.89 E-value=3.2e-09 Score=111.80 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=79.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------CCceEEeecccC-CCCCCCCccEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQ-LPYPSLSFDML 321 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~-Lpfpd~sFDlV 321 (667)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++- ..+.+..+|+.. ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35799999999999999999862 3467999999999999987642 245677777655 34456799999
Q ss_pred Eeccccccc---cc--C--HHHHHHHHHhcccCCeEEEEEeC
Q 005959 322 HCARCGVDW---DQ--K--DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 322 ~~s~~ll~~---~~--d--~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
++... .++ .+ . ...+++++.++|||||.+++...
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99855 444 21 1 25799999999999999999753
No 200
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.89 E-value=3.6e-09 Score=112.48 Aligned_cols=102 Identities=11% Similarity=0.022 Sum_probs=78.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---ceEEeecccCCCC----CCCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLPY----PSLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~Lpf----pd~sFDlV~ 322 (667)
..+|||+|||+|.++..+++.+. .|+++|.|+.+++.|+++ ++. +.+.++|+..+.. .+++||+|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 36999999999999999998863 699999999999988764 443 6777777765432 156899999
Q ss_pred ecccc---------cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 323 CARCG---------VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 323 ~s~~l---------l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+..-. .++..+...++.++.++|+|||+|++.....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 95321 1223445689999999999999988876543
No 201
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.89 E-value=4e-09 Score=111.60 Aligned_cols=100 Identities=15% Similarity=0.075 Sum_probs=77.1
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-----CCceEEeecccCC--CCCCCCccEEEecccc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQL--PYPSLSFDMLHCARCG 327 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg-----l~~~~~~~da~~L--pfpd~sFDlV~~s~~l 327 (667)
.+|||||||+|.++..++++. ....++++|+++.+++.|++.. ..+.+..+|+... .+++++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 499999999999999999852 3447999999999999998763 2456777776554 345689999999643
Q ss_pred cccc-cC---HHHHHHHHHhcccCCeEEEEEeC
Q 005959 328 VDWD-QK---DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 328 l~~~-~d---~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.+.. +. ...++++++++|+|||+|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 11 15799999999999999998765
No 202
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.89 E-value=8.5e-09 Score=106.62 Aligned_cols=103 Identities=11% Similarity=0.078 Sum_probs=78.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..++++ .....++++|+++.+++.|++.. ..+.+..+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3579999999999999999987 23467999999999999998642 245677777554 344467999999
Q ss_pred ecccccccccC----HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 323 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 323 ~s~~ll~~~~d----~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+... .++.+. ...+++++.++|+|||.+++....
T Consensus 154 ~d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9744 332221 257999999999999999998643
No 203
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.89 E-value=6.3e-09 Score=110.10 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=78.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++. .++.+..+|+.. ++..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 34799999999999999999762 3567999999999999998753 235566676544 333457899999
Q ss_pred eccccccccc--CH--HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 323 CARCGVDWDQ--KD--GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 323 ~s~~ll~~~~--d~--~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+... .++.+ .. ..+++++.++|+|||++++.....
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 8743 22221 11 579999999999999999986543
No 204
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.89 E-value=5.9e-09 Score=110.11 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=75.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++- ..+.+..+|+.. ++..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 34799999999999999999873 4568999999999999998753 235566666654 334567899999
Q ss_pred ecccccccccCH----HHHHHHHHhcccCCeEEEEEeC
Q 005959 323 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 323 ~s~~ll~~~~d~----~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
+... .++.+.. ..+++++.++|+|||.+++...
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 8753 3332221 5789999999999999999863
No 205
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.88 E-value=8.1e-09 Score=107.86 Aligned_cols=103 Identities=15% Similarity=0.034 Sum_probs=77.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++. .++.+..+|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999999872 3467999999999999887652 245677777544 344567899999
Q ss_pred eccccccccc-----CHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 323 CARCGVDWDQ-----KDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 323 ~s~~ll~~~~-----d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+... .++.. ....+++++.++|+|||.+++....
T Consensus 169 ~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 8633 22111 1257999999999999999998654
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.88 E-value=8.2e-09 Score=107.11 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=79.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|++.- .++.+..+|+.. ++..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45799999999999999999773 3568999999999999998752 235667677654 233367899999
Q ss_pred ecccccccccCH----HHHHHHHHhcccCCeEEEEEeCCC
Q 005959 323 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 323 ~s~~ll~~~~d~----~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
+... .++.+.. ..+++++.++|+|||.+++....+
T Consensus 157 ~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 157 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 9643 3332221 579999999999999999986543
No 207
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.88 E-value=4.2e-09 Score=110.65 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---------CCCceEEeecccC-CCCCCCCccEEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------GLPAMIGSFASKQ-LPYPSLSFDMLH 322 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er---------gl~~~~~~~da~~-Lpfpd~sFDlV~ 322 (667)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++ ..++.+..+|+.. ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999999873 356799999999999998864 2345667777654 445567999999
Q ss_pred ecccccccccC----HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 323 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 323 ~s~~ll~~~~d----~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+... .++.+. ...+++++.++|+|||.+++....
T Consensus 174 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9644 332211 236899999999999999998743
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.87 E-value=3.1e-09 Score=107.97 Aligned_cols=99 Identities=13% Similarity=0.035 Sum_probs=76.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccC-CCC------CCCCccE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPY------PSLSFDM 320 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-Lpf------pd~sFDl 320 (667)
+.+|||||||+|..+..+++.......++++|.++.+++.|+++ ++ .+.+..+++.. ++. ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 47999999999999999998632246799999999999888754 44 35566677644 232 2578999
Q ss_pred EEecccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 321 V~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|++... ..+...++.++.++|||||++++.+.
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 998743 34567899999999999999998764
No 209
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.87 E-value=4.6e-09 Score=108.15 Aligned_cols=106 Identities=18% Similarity=0.112 Sum_probs=80.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCC----CCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY----PSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpf----pd~sFDlV~~s 324 (667)
+.+|||+|||+|..+..+++.......|+++|.++.+++.++++ ++ ++.+..+|+..++. .+++||+|++.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 47999999999999999998522235799999999999887654 44 56677778777654 36789999986
Q ss_pred ccc-----cc------------cccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 RCG-----VD------------WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 ~~l-----l~------------~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
... ++ .......++.++.++|||||++++++....
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 210 11 113446799999999999999999987554
No 210
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.87 E-value=2.7e-09 Score=113.69 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=79.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
...+|||||||+|.++..++++. +...++++|. +.+++.+++. ..+.+..+|+.. +++ +||+|++..++++| +
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~-~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDW-N 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGS-C
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCC-C
Confidence 34799999999999999999874 3457899999 7888776542 246777778766 666 49999999985555 4
Q ss_pred CHH--HHHHHHHhcccC---CeEEEEEeCCC
Q 005959 333 KDG--ILLLEVDRVLKP---GGYFVWTSPLT 358 (667)
Q Consensus 333 d~~--~~L~Ei~RvLKP---GG~Lvis~p~~ 358 (667)
+.. .+|+++.++||| ||++++.++..
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 544 899999999999 99999988754
No 211
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.87 E-value=1.1e-08 Score=112.77 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=81.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC--CCCCCccEEEec--
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCA-- 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp--fpd~sFDlV~~s-- 324 (667)
+.+|||+|||+|..+..+++.......|+++|.++.+++.++++ |+ ++.+..+|+..++ +++++||+|++.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 47999999999999999998632235799999999999887655 55 5677788887776 666789999962
Q ss_pred ---ccccccccCH----------------HHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 325 ---RCGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 325 ---~~ll~~~~d~----------------~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
...++..++. ..+|.++.++|||||++++++.....
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 2223322222 46899999999999999999876543
No 212
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.86 E-value=4.9e-09 Score=113.43 Aligned_cols=96 Identities=22% Similarity=0.225 Sum_probs=74.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH----cCC--CceEEeecccCCCCCCCCccEEEeccc-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE----RGL--PAMIGSFASKQLPYPSLSFDMLHCARC- 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~e----rgl--~~~~~~~da~~Lpfpd~sFDlV~~s~~- 326 (667)
..+|||||||+|.++..+++.|. ..|+++|.|+ |++.|++ .++ .+.+..++++.+.++ +.||+|+|...
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred CCEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 47899999999999999888874 4689999985 6666653 354 366788888888887 58999999532
Q ss_pred -ccccccCHHHHHHHHHhcccCCeEEEE
Q 005959 327 -GVDWDQKDGILLLEVDRVLKPGGYFVW 353 (667)
Q Consensus 327 -ll~~~~d~~~~L~Ei~RvLKPGG~Lvi 353 (667)
.+.+......++....|.|||||.++.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccchhhhHHHHHHhhCCCCceECC
Confidence 123334567889999999999999873
No 213
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.86 E-value=4e-09 Score=104.28 Aligned_cols=100 Identities=14% Similarity=0.070 Sum_probs=76.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-C-CCC----CCccEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPS----LSFDML 321 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-p-fpd----~sFDlV 321 (667)
..+|||||||+|.++..+++.......++++|.++.+++.|+++ ++ .+.+..+++... + +++ ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 47999999999999999998632246799999999999888764 43 456666665432 1 211 689999
Q ss_pred EecccccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++... ..+...++.++.++|+|||++++.+..
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 98743 344568999999999999999997653
No 214
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=9.8e-09 Score=105.75 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=80.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
...+|||+|||+|.++..+++.+ ....|+++|.++.+++.|+++ ++ ++.+..+|+..++. +++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 34799999999999999999873 245799999999999888753 43 45678888887744 6789999988652
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
....++.++.++|+|||.+++++...
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 45678999999999999999988754
No 215
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.85 E-value=8.1e-10 Score=111.46 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=70.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCC---CCC---CCCccE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL---PYP---SLSFDM 320 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~L---pfp---d~sFDl 320 (667)
...+|||+|||+|.++..++++. ....++++|+++.|++.|+++ ++. +.+..+|+... +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 35799999999999999988762 235799999999999988754 443 67777776652 455 368999
Q ss_pred EEecccccccc--------------cCHHHHHHHHHhcccCCeEEEEEe
Q 005959 321 LHCARCGVDWD--------------QKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 321 V~~s~~ll~~~--------------~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
|+|+...++.. .....++.++.|+|||||.+.+..
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 99985533221 011245778999999999887653
No 216
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.82 E-value=1.2e-08 Score=106.05 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=74.2
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCc---cEEEecc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSF---DMLHCAR 325 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sF---DlV~~s~ 325 (667)
.+|||+|||+|.++..+++. ....|+++|+|+.+++.|+++ ++. +.+.++|... +++ ++| |+|+++.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 68999999999999999987 456799999999999988764 443 6777777665 233 479 9999972
Q ss_pred cccc----------cc--------cCHHHHHHHHH-hcccCCeEEEEEeC
Q 005959 326 CGVD----------WD--------QKDGILLLEVD-RVLKPGGYFVWTSP 356 (667)
Q Consensus 326 ~ll~----------~~--------~d~~~~L~Ei~-RvLKPGG~Lvis~p 356 (667)
-.+. +. .+...+++++. +.|+|||++++...
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2110 11 11226899999 99999999998654
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.81 E-value=8e-09 Score=106.99 Aligned_cols=100 Identities=13% Similarity=0.053 Sum_probs=75.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------------CCceEEeecccC-CCCCCC
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------LPAMIGSFASKQ-LPYPSL 316 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------------l~~~~~~~da~~-Lpfpd~ 316 (667)
.+.+|||||||+|.++..++++ ....++++|+++.+++.|++.- ..+.+..+|+.. ++. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 3479999999999999999987 3568999999999999988652 234566666543 222 57
Q ss_pred CccEEEeccccccccc--C--HHHHHHHHHhcccCCeEEEEEeC
Q 005959 317 SFDMLHCARCGVDWDQ--K--DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 317 sFDlV~~s~~ll~~~~--d--~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
+||+|++... .++.+ . ...+++++.++|+|||.+++...
T Consensus 152 ~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8999998754 33221 1 25689999999999999999754
No 218
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.81 E-value=1.2e-08 Score=104.90 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=74.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCceEEeecccCCCCCCCCccEEEe
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPYPSLSFDMLHC 323 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~Lpfpd~sFDlV~~ 323 (667)
.+.+|||||||+|.++..++++ . ..++++|+++.+++.|++.- ..+.+..+|+.... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 3579999999999999999987 3 68999999999999887542 23566667766554 78999998
Q ss_pred cccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 324 s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.. .++..+++++.++|+|||.+++...
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 72 2345699999999999999999754
No 219
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.81 E-value=1.7e-09 Score=113.79 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=68.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecC----CHHHHHHHHHc--C-CCceEEee-cccCCCCCCCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA----SGSQVQLTLER--G-LPAMIGSF-ASKQLPYPSLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~----S~~ml~~A~er--g-l~~~~~~~-da~~Lpfpd~sFDlV~~s 324 (667)
+..+|||||||+|.++..+++++ .|+++|. ++.+++.+..+ + ..+.+.++ |+..++ .++||+|+|.
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 34799999999999999999872 4788888 45443222111 1 13456666 665554 5689999997
Q ss_pred cccc--ccccCHH---HHHHHHHhcccCCeEEEEEeCCC
Q 005959 325 RCGV--DWDQKDG---ILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 325 ~~ll--~~~~d~~---~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+.. ++..+.. .+|.++.++|||||.|++..+..
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 5521 2222222 47899999999999999987754
No 220
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.81 E-value=3.6e-08 Score=105.99 Aligned_cols=100 Identities=15% Similarity=0.066 Sum_probs=78.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccC-CCC-CCCCccEEEecc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPY-PSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~-Lpf-pd~sFDlV~~s~ 325 (667)
.+.+|||+| |+|.++..++..+. ...|+++|+++.|++.|+++ ++ ++.+..+|+.. +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 357999999 99999999988753 25799999999999988765 55 67788888887 764 457899999986
Q ss_pred cccccccCHHHHHHHHHhcccCCeE-EEEEeC
Q 005959 326 CGVDWDQKDGILLLEVDRVLKPGGY-FVWTSP 356 (667)
Q Consensus 326 ~ll~~~~d~~~~L~Ei~RvLKPGG~-Lvis~p 356 (667)
. ++... ...++.++.++|||||. ++++..
T Consensus 250 p-~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 P-ETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp C-SSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred C-CchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 5 33222 46799999999999994 455554
No 221
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.79 E-value=3.1e-08 Score=105.80 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=82.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-----CCceEEeecccCCCCCCCCccEEEecccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg-----l~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
...+|||||||+|.++..++++. +...++..|. +.+++.|+++- -++.+..+|+...|.+ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 44799999999999999999884 5567788887 78888887652 2466777887665555 47999999997
Q ss_pred cccccCH-HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 328 VDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 328 l~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
++|.++. .++|++++++|+|||.++|.+....
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 7776433 4789999999999999999987654
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.79 E-value=1.2e-08 Score=99.71 Aligned_cols=95 Identities=12% Similarity=0.015 Sum_probs=70.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCC-----------CCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-----------SLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfp-----------d~sFDlV~ 322 (667)
..+|||+|||+|.++..++++ ...|+++|+++.. ....+.+.++|+...+.. .++||+|+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 479999999999999999988 4579999998641 123567788887776521 14899999
Q ss_pred eccccccc----ccC-------HHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 323 CARCGVDW----DQK-------DGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 323 ~s~~ll~~----~~d-------~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
|... ... ..+ ...++.++.++|||||.|++..+..
T Consensus 97 sd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 97 SDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp ECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 9643 111 111 2467899999999999999887643
No 223
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.79 E-value=1.7e-08 Score=110.70 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=81.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCC--CCCCCccEEEec---
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP--YPSLSFDMLHCA--- 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lp--fpd~sFDlV~~s--- 324 (667)
+.+|||+|||+|..+..+++.... ..|+++|.++.+++.++++ ++++.+..+|+..++ +++++||+|++.
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred cCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 479999999999999999987432 6799999999998877654 667778888887776 666799999962
Q ss_pred -c-cccccccCH----------------HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 -R-CGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 -~-~ll~~~~d~----------------~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
. ..++..++. ..+|.++.++|||||++++++....
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 1 112222221 3689999999999999999987554
No 224
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.78 E-value=1.2e-08 Score=102.71 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=76.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCC-C-C-----CCCCccE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFDM 320 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-p-f-----pd~sFDl 320 (667)
+.+|||||||+|..+..+++.-.....++++|.++.+++.|+++ ++ .+.+..+++... + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 47999999999999999998632246799999999999888754 44 255666665442 2 2 2578999
Q ss_pred EEecccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 321 V~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|++... ..+...++.++.++|||||++++.+.
T Consensus 151 I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEECCc----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 998632 34557899999999999999998764
No 225
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.78 E-value=1.3e-07 Score=91.85 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=73.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
...+|||+|||+|.++..+++.+. ..++++|.++.+++.++++ ++++.+..+|+..++ ++||+|+++....
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 347999999999999999998853 3699999999999998865 336778888888764 4899999987633
Q ss_pred ccc-cCHHHHHHHHHhcccCCeEEEEE
Q 005959 329 DWD-QKDGILLLEVDRVLKPGGYFVWT 354 (667)
Q Consensus 329 ~~~-~d~~~~L~Ei~RvLKPGG~Lvis 354 (667)
... .....++.++.++| ||.+++.
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE
Confidence 332 22357899999998 6655554
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.77 E-value=1.6e-08 Score=112.16 Aligned_cols=107 Identities=22% Similarity=0.277 Sum_probs=80.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCC-CCCCCccEEEec----
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP-YPSLSFDMLHCA---- 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lp-fpd~sFDlV~~s---- 324 (667)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+.+.+..+|+..++ +.+++||+|++.
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCS 181 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcC
Confidence 47999999999999999997632335799999999999887654 666677777877766 346799999952
Q ss_pred cc-ccccccC----------------HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 325 RC-GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 325 ~~-ll~~~~d----------------~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.. .+...++ ...+|.++.++|||||+|++++.....
T Consensus 182 g~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 182 GEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 11 1111111 156899999999999999999876543
No 227
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.77 E-value=3.4e-08 Score=100.02 Aligned_cols=120 Identities=14% Similarity=0.058 Sum_probs=89.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
+.+|||||||+|.++..+++.+ ....|+++|+++.+++.|+++ ++ .+.+..+|......+++.||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 4789999999999999999885 456799999999999988754 44 3667777876666555579998765431
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEeecc
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~~~ 391 (667)
- +-...++.+..+.|+++|+|+++.... ...++.+....+|....+.
T Consensus 101 g---~lI~~IL~~~~~~l~~~~~lIlqp~~~--------------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 101 G---RLIADILNNDIDKLQHVKTLVLQPNNR--------------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHTTEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCcCCEEEEECCCC--------------hHHHHHHHHHCCCEEEEEE
Confidence 1 223568889999999999999986421 2345666677788777543
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.76 E-value=1.7e-08 Score=104.84 Aligned_cols=108 Identities=20% Similarity=0.149 Sum_probs=78.0
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------CCceEE
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIG 304 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg------l~~~~~ 304 (667)
....+.+.+.+.... ..+|||||||+|.++..|++.+ ..++++|+++.|++.++++. .++.+.
T Consensus 14 ~~i~~~i~~~~~~~~--------~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 14 PLIINSIIDKAALRP--------TDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp HHHHHHHHHHTCCCT--------TCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHHHHHhcCCCC--------CCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 344555666554433 3799999999999999999885 36899999999999887652 246778
Q ss_pred eecccCCCCCCCCccEEEecccccccccCHH-HHH--------------HHH--HhcccCCeEEE
Q 005959 305 SFASKQLPYPSLSFDMLHCARCGVDWDQKDG-ILL--------------LEV--DRVLKPGGYFV 352 (667)
Q Consensus 305 ~~da~~Lpfpd~sFDlV~~s~~ll~~~~d~~-~~L--------------~Ei--~RvLKPGG~Lv 352 (667)
.+|+..++++ +||+|+++.. +++..+.- .++ +|+ +++|+|||.++
T Consensus 83 ~~D~~~~~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred Ecceecccch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 8888887776 7999999755 55543221 222 233 36899999863
No 229
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.75 E-value=3.8e-08 Score=100.43 Aligned_cols=119 Identities=15% Similarity=0.091 Sum_probs=88.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
+.+|||||||+|.++..|++.+ ....|+++|+++.+++.|+++ ++. +.+..+|......++..||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 4789999999999999999885 456799999999999988765 553 567777766655554469998865431
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEeec
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~~ 390 (667)
- +-...+|.+..+.|+++|+|+++-... ...++.+....+|..+.+
T Consensus 101 g---~lI~~IL~~~~~~L~~~~~lIlq~~~~--------------~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 101 G---TLIRTILEEGAAKLAGVTKLILQPNIA--------------AWQLREWSEQNNWLITSE 146 (244)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHHTEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCCEEEEEcCCC--------------hHHHHHHHHHCCCEEEEE
Confidence 1 223568899999999999999986421 224456666777876544
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.73 E-value=5.3e-08 Score=104.86 Aligned_cols=100 Identities=17% Similarity=0.005 Sum_probs=76.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++..++..+. ...|+++|+++.|++.|+++ ++ .+.+.++|+..+++++++||+|+|+...
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 47899999999999999998853 23689999999999988765 55 5788899999999988999999997541
Q ss_pred cccc------cC-HHHHHHHHHhcccCCeEEEEEeC
Q 005959 328 VDWD------QK-DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 328 l~~~------~d-~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.... .+ ...++.++.++| ||.+++...
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 1111 11 156889999999 555555544
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.72 E-value=3.7e-08 Score=109.81 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=79.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCC-CCCCccEEEec---
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY-PSLSFDMLHCA--- 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpf-pd~sFDlV~~s--- 324 (667)
+.+|||+|||+|..+..+++..-....|+++|+++.+++.++++ |+ ++.+..+|+..++. .+++||+|++.
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 47999999999999999998632245799999999999887654 55 46677788777664 46789999973
Q ss_pred -c-cccccccC----------------HHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 -R-CGVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 -~-~ll~~~~d----------------~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
. ..+...++ ...+|.++.++|||||+|++++....
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 1 11111111 23689999999999999999987553
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.68 E-value=3.6e-08 Score=107.22 Aligned_cols=103 Identities=15% Similarity=0.016 Sum_probs=77.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCC-CCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~L-pfpd~sFDlV~~s~~ll 328 (667)
+.+|||+|||+|.++..+++.|. .|+++|.|+.+++.|+++ ++...+.++|+..+ +...+.||+|++....+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 47999999999999999998863 289999999999888754 56656667776553 22233499999974422
Q ss_pred cc--------ccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 329 DW--------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 329 ~~--------~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.. ..+...++.++.++|+|||+|++++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 21 12334788999999999999998776543
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.68 E-value=9.3e-08 Score=96.49 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=85.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecc-cCCCCCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFAS-KQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da-~~Lpfpd~sFDlV~~s~~ 326 (667)
+.+|||||||+|.++..+++.+ +...|+++|+++.+++.|+++ ++. +.+..+|. ..++.. ..||+|+.+..
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCC
Confidence 4789999999999999999875 456799999999999888754 553 56666665 233322 26999887643
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCCCChhhhhhhHHHHhhhhhhhhhhhccceEEeec
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~ie~l~~~~~W~ll~~ 390 (667)
.- .-...++.+....|+|+|+|+++-.. . -..++.+....+|..+.+
T Consensus 94 Gg---~~i~~Il~~~~~~L~~~~~lVlq~~~-~-------------~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 94 GG---RLIARILEEGLGKLANVERLILQPNN-R-------------EDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CH---HHHHHHHHHTGGGCTTCCEEEEEESS-C-------------HHHHHHHHHHTTEEEEEE
T ss_pred Ch---HHHHHHHHHHHHHhCCCCEEEEECCC-C-------------HHHHHHHHHHCCCEEEEE
Confidence 11 12357899999999999999997552 1 123455666778877755
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.67 E-value=3.5e-08 Score=106.80 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=77.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CceEEeecccC-CCC---CCCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQ-LPY---PSLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~-Lpf---pd~sFDlV~ 322 (667)
..+|||+|||+|.++..+++.+ ...|+++|.|+.+++.|+++ ++ ++.+.++|+.. ++. ..++||+|+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4799999999999999999875 34799999999999888754 44 46778888655 221 245899999
Q ss_pred eccccc----ccc----cCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 323 CARCGV----DWD----QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 323 ~s~~ll----~~~----~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+..... ... .+...++.++.++|+|||+++++.....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 864322 112 2234577888999999999999986543
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.62 E-value=8.6e-08 Score=103.82 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=79.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CceEEeecccCCCC----CCCCccEEE
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY----PSLSFDMLH 322 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~Lpf----pd~sFDlV~ 322 (667)
..+|||+|||+|.++..+++.+ ...|+++|+++.+++.|+++ ++ ++.+..+|+..+.. .+++||+|+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4799999999999999999886 34799999999999888754 55 46777777665421 146899999
Q ss_pred eccccc--------ccccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 323 CARCGV--------DWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 323 ~s~~ll--------~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
+..-.. ........++.++.++|+|||+++++.....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 974311 1123446789999999999999999886543
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.61 E-value=7.4e-08 Score=102.21 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=78.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCc----eeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEec
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELL----TMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCA 324 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~----~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s 324 (667)
...+|||+|||+|.++..+++.... ...++|+|+++.+++.|+.+ ++.+.+..+|+.. +.+.+.||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEEC
Confidence 3479999999999999988876311 26799999999999888753 6677787777655 3345789999999
Q ss_pred ccccccccC----------------H-HHHHHHHHhcccCCeEEEEEeCC
Q 005959 325 RCGVDWDQK----------------D-GILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 325 ~~ll~~~~d----------------~-~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
....++..+ . ..++.++.+.|+|||++++..+.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 652222111 1 15899999999999999999874
No 237
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.61 E-value=4.4e-08 Score=106.05 Aligned_cols=104 Identities=14% Similarity=0.013 Sum_probs=79.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCC----CCCCccEEEe
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY----PSLSFDMLHC 323 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpf----pd~sFDlV~~ 323 (667)
..+|||+|||+|.++..+++.+ ...|+++|.++.+++.|+++ ++ ++.+..+|+..+.. .+++||+|++
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4799999999999999999875 34799999999999888654 44 46777777665431 2578999999
Q ss_pred cccccc--------cccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 324 ARCGVD--------WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 324 s~~ll~--------~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
..-.+. ...+...++.++.++|+|||+++++.....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 643221 113345789999999999999999887543
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.61 E-value=9e-08 Score=100.08 Aligned_cols=86 Identities=15% Similarity=0.258 Sum_probs=62.0
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEee
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 306 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~ 306 (667)
...+.+.+.+.... ..+|||||||+|.++..|++.+ ..|+++|+++.|++.++++ +. ++.+..+
T Consensus 29 ~i~~~i~~~~~~~~--------~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~ 97 (299)
T 2h1r_A 29 GILDKIIYAAKIKS--------SDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHCCCT--------TCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC---
T ss_pred HHHHHHHHhcCCCC--------cCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 34455666554433 3799999999999999999874 4699999999999988764 33 4667778
Q ss_pred cccCCCCCCCCccEEEecccccccc
Q 005959 307 ASKQLPYPSLSFDMLHCARCGVDWD 331 (667)
Q Consensus 307 da~~Lpfpd~sFDlV~~s~~ll~~~ 331 (667)
|+..++++ +||+|+++.. +++.
T Consensus 98 D~~~~~~~--~~D~Vv~n~p-y~~~ 119 (299)
T 2h1r_A 98 DAIKTVFP--KFDVCTANIP-YKIS 119 (299)
T ss_dssp -CCSSCCC--CCSEEEEECC-GGGH
T ss_pred chhhCCcc--cCCEEEEcCC-cccc
Confidence 88777764 7999999855 5554
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.60 E-value=4.4e-08 Score=113.97 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=79.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---ceEEeecccC-CCCCCCCccEEEecc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQ-LPYPSLSFDMLHCAR 325 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~-Lpfpd~sFDlV~~s~ 325 (667)
+.+|||+|||+|.++..++..|. ..|+++|.|+.+++.|+++ ++. +.+.++|+.. ++...++||+|++..
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 47999999999999999998763 4699999999999988764 443 6777788765 445567999999964
Q ss_pred cc----------cccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 326 CG----------VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 326 ~l----------l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
-. .....+...++.++.++|+|||+|+++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 32 122234457899999999999999998765
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.60 E-value=5.2e-08 Score=105.11 Aligned_cols=103 Identities=18% Similarity=0.116 Sum_probs=78.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-ceEEeecccCCCC----CCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPY----PSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~Lpf----pd~sFDlV~~s 324 (667)
..+|||+|||+|.++..+++. ...|+++|.++.+++.|+++ ++. +.+..+|+..+.. .+++||+|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 378999999999999999987 46799999999999888754 443 6777777765432 25789999996
Q ss_pred cccccc--------ccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 RCGVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 ~~ll~~--------~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
.-.+.. ......++.++.++|+|||+++++.....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 432111 12345689999999999999999987543
No 241
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.58 E-value=8.6e-08 Score=97.65 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=75.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+.+|||||||+|.++..+. ....++++|+++.|++++++. +.+..+...|....+.+. +||+|++.-+ +
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~-l 178 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKL-L 178 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESC-H
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHH-H
Confidence 46899999999999999887 246799999999999888754 666778888887777665 8999999877 4
Q ss_pred ccccCH-HHHHHHHHhcccCCeEEEEEe
Q 005959 329 DWDQKD-GILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 329 ~~~~d~-~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
|+.++. .....++...|+++|.++-..
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 444333 234448888999997766543
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.58 E-value=1.3e-07 Score=104.77 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-ceEEeecccCCC-CCCCCccEEEeccc-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLP-YPSLSFDMLHCARC- 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~Lp-fpd~sFDlV~~s~~- 326 (667)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+. +.+...|+..++ +.+++||+|++.--
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 47999999999999999987622235799999999999877654 553 556677776665 34579999997421
Q ss_pred ----ccc--------cccC--------HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 327 ----GVD--------WDQK--------DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 327 ----ll~--------~~~d--------~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
.+. |..+ ...+|.++.++|||||+|++++.....
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 111 1111 126799999999999999999876543
No 243
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.55 E-value=2.4e-07 Score=96.90 Aligned_cols=94 Identities=12% Similarity=-0.058 Sum_probs=66.9
Q ss_pred CCCEEEEeCC------CCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceE-EeecccCCCCCCCCccEEEecc
Q 005959 253 GVRTILDIGC------GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLPYPSLSFDMLHCAR 325 (667)
Q Consensus 253 ~~~~VLDIGC------GtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~-~~~da~~Lpfpd~sFDlV~~s~ 325 (667)
+..+|||||| |+|. ..+++.-.....|+++|+++. + .++.+ .++|+..++++ ++||+|+|+.
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~Vvsn~ 131 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------SDADSTLIGDCATVHTA-NKWDLIISDM 131 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------CSSSEEEESCGGGCCCS-SCEEEEEECC
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------CCCEEEEECccccCCcc-CcccEEEEcC
Confidence 4579999999 5576 334433212357999999987 2 24667 88899888876 6899999974
Q ss_pred cccccc-----------cCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 326 CGVDWD-----------QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 326 ~ll~~~-----------~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
. .++. .....+++++.|+|||||.|++.++..
T Consensus 132 ~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 132 Y-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp C-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred C-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3 2211 112479999999999999999987644
No 244
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.55 E-value=4.6e-09 Score=106.17 Aligned_cols=110 Identities=16% Similarity=0.167 Sum_probs=76.9
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecc
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS 308 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da 308 (667)
...+.+.+.+.... ..+|||||||+|.++..+++.+ ..++++|+++.|++.++++. .++.+..+|+
T Consensus 16 ~~~~~i~~~~~~~~--------~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~ 84 (245)
T 1yub_A 16 KVLNQIIKQLNLKE--------TDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI 84 (245)
T ss_dssp TTHHHHHHHCCCCS--------SEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC
T ss_pred HHHHHHHHhcCCCC--------CCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECCh
Confidence 34455666655433 3789999999999999999885 56999999999998876642 2466788899
Q ss_pred cCCCCCC-CCccEEEecccccccc-----------cCHHHHH----HHHHhcccCCeEEEEE
Q 005959 309 KQLPYPS-LSFDMLHCARCGVDWD-----------QKDGILL----LEVDRVLKPGGYFVWT 354 (667)
Q Consensus 309 ~~Lpfpd-~sFDlV~~s~~ll~~~-----------~d~~~~L----~Ei~RvLKPGG~Lvis 354 (667)
..+++++ ++| .|+++.. ++.. .....++ +.+.|+|+|||.+++.
T Consensus 85 ~~~~~~~~~~f-~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp TTTTCCCSSEE-EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred hhcCcccCCCc-EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 8888874 689 6777632 2211 1111233 5578888888876654
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.55 E-value=3.7e-07 Score=94.89 Aligned_cols=96 Identities=9% Similarity=0.114 Sum_probs=75.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--ceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
+.+|||+|||+|.++..+++++ ...|+++|.++.+++.++++ ++. +.+..+|+..++. .+.||.|+++..
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p- 201 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-
Confidence 4799999999999999999886 34699999999999887653 443 4567778777654 468999998733
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
.....+|..+.++|||||.+.+....
T Consensus 202 ----~~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----CcHHHHHHHHHHHcCCCCEEEEEeee
Confidence 22346788889999999999887654
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.54 E-value=1.3e-07 Score=102.07 Aligned_cols=99 Identities=19% Similarity=0.119 Sum_probs=73.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccc---
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW--- 330 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~--- 330 (667)
..+|||+|||+|.++..++++......++|+|+++.+++.| ..+.+.++|....+. +++||+|+++--....
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcCc-cCCCCEEEECcCccCcccc
Confidence 36999999999999999987521235799999999998777 356677778776643 4689999997321111
Q ss_pred ------c-cC------------------HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 331 ------D-QK------------------DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 331 ------~-~d------------------~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
. ++ ...++..+.++|+|||++++..+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 0 11 125688999999999999999874
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.53 E-value=1.8e-07 Score=94.87 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=56.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeecccCCCCCC-CCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS-LSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~Lpfpd-~sFDlV~~s~~ 326 (667)
...+|||||||+|.++..+++++ ..++++|.++.|++.++++. .++.+..+|+..+++++ ..| .|+++..
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nlP 103 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNIP 103 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEECC
T ss_pred CCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeCC
Confidence 34799999999999999999985 56999999999999998763 35678889999999875 456 5666643
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.52 E-value=7e-07 Score=98.03 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=72.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
...+|||+|||+|.++..|++.+ ..|+++|.++.|++.|+++ ++.+.+..+|+..+... +||+|++.....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA 364 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT
T ss_pred CCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc
Confidence 34799999999999999999874 4699999999999888654 55577888888776432 899999874311
Q ss_pred ccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 329 DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 329 ~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.....++..+. .|+|||+++++..
T Consensus 365 ---g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 ---GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ---CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred ---chHHHHHHHHH-hcCCCcEEEEECC
Confidence 11234555554 5999999999863
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.51 E-value=2.9e-07 Score=94.74 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=77.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCceEEeecccCCCCCCCCccEEEeccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll 328 (667)
.+.+|||||||+|-++..++... ....++++|+++.|+++++++ |++..+...|...-+ +.+.||+|++.-+ +
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkt-i 208 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKT-L 208 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTC-H
T ss_pred CCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHH-H
Confidence 36799999999999999988763 567899999999999887654 677777777754444 5578999999977 5
Q ss_pred ccccCH-HHHHHHHHhcccCCeEEEEEeC
Q 005959 329 DWDQKD-GILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 329 ~~~~d~-~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|+.++. .....++...|+|+|.+|-...
T Consensus 209 ~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 209 PCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred HHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 555443 2233399999999999886544
No 250
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.49 E-value=2.7e-07 Score=97.89 Aligned_cols=94 Identities=10% Similarity=0.071 Sum_probs=75.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CceEEeecccCCCCCCCCccEEEecccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~l 327 (667)
..+|||+|||+|.++.. ++. ...|+++|.++.+++.|+++ ++ ++.+..+|+.... ++||+|++...
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT-
T ss_pred CCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc-
Confidence 47999999999999999 773 45799999999999888754 44 4678888887765 78999998732
Q ss_pred cccccCHHHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 328 l~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
. ....++.++.++|+|||.+++.+....
T Consensus 268 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 268 K----FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp T----TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred H----hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 1 123689999999999999999876543
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.45 E-value=4.9e-07 Score=94.69 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=70.6
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeec
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFA 307 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~d 307 (667)
....+.+.+.+....+ .+|||||||+|.++..|++.+ ..|+++|.++.|++.++++. .++.+..+|
T Consensus 36 ~~i~~~Iv~~l~~~~~--------~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD 104 (295)
T 3gru_A 36 KNFVNKAVESANLTKD--------DVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECc
Confidence 4455566666654443 799999999999999999874 56899999999999887652 467888999
Q ss_pred ccCCCCCCCCccEEEeccccccc
Q 005959 308 SKQLPYPSLSFDMLHCARCGVDW 330 (667)
Q Consensus 308 a~~Lpfpd~sFDlV~~s~~ll~~ 330 (667)
+..+++++.+||+|+++.. +++
T Consensus 105 ~l~~~~~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 105 ALKVDLNKLDFNKVVANLP-YQI 126 (295)
T ss_dssp TTTSCGGGSCCSEEEEECC-GGG
T ss_pred hhhCCcccCCccEEEEeCc-ccc
Confidence 9999998889999998855 444
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.45 E-value=9.1e-07 Score=97.09 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=71.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccC----CCCCCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ----LPYPSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~----Lpfpd~sFDlV~~s 324 (667)
..+|||+|||+|.++..|++. ...|+++|.|+.+++.|+++ ++ ++.+..+|+.. +++++++||+|++.
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 478999999999999999987 35699999999999888754 44 56788888766 45677899999987
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.-... . ..++..+. .++|++.++++..
T Consensus 364 PPr~g---~-~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 364 PARAG---A-AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CCTTC---C-HHHHHHHH-HHCCSEEEEEESC
T ss_pred CCCcc---H-HHHHHHHH-hcCCCeEEEEECC
Confidence 43111 1 24555554 3789999888754
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.40 E-value=4.7e-07 Score=99.63 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=83.0
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcC------------CceeEEEEecCCHHHHHHHHH---
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE------------LLTMCIANYEASGSQVQLTLE--- 296 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g------------~~~~sV~gvD~S~~ml~~A~e--- 296 (667)
...+.+.+.+... ...+|||.|||+|.++..+++.- .....++|+|+++.+++.|+.
T Consensus 158 ~v~~~mv~~l~~~--------~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINPQ--------MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCCC--------TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--------CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 3445555555432 33689999999999998887641 023468999999999988865
Q ss_pred -cCC---CceEEeecccCCCCCCCCccEEEeccccccc--ccC--------------HHHHHHHHHhcccCCeEEEEEeC
Q 005959 297 -RGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW--DQK--------------DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 297 -rgl---~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~--~~d--------------~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
+++ ...+.++|+...+... .||+|+++...... ... ...++..+.+.|||||++++..|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~~-~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPST-LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCSS-CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCcccC-CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 355 5667778877666543 89999998542221 110 13689999999999999999887
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.31 E-value=9.7e-07 Score=94.83 Aligned_cols=103 Identities=13% Similarity=0.018 Sum_probs=75.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CceEEeecccCCCC----CC
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQLPY----PS 315 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------------~~~~~~~da~~Lpf----pd 315 (667)
.+.+|||||||+|.++..+++++. ..|+.+|+++.+++.|++.-. .+.+..+|+...-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 568999999999999999998863 679999999999999987621 24566666554321 35
Q ss_pred CCccEEEecccccccc--c---CHHHHHHHH----HhcccCCeEEEEEeCC
Q 005959 316 LSFDMLHCARCGVDWD--Q---KDGILLLEV----DRVLKPGGYFVWTSPL 357 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~--~---d~~~~L~Ei----~RvLKPGG~Lvis~p~ 357 (667)
++||+|++........ + ....+++++ .++|+|||++++..-.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 7899999874321211 1 113566666 8999999999987643
No 255
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.30 E-value=5.3e-07 Score=90.95 Aligned_cols=133 Identities=14% Similarity=0.030 Sum_probs=91.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc--cccccccccccCCCCCCCccccccccC-ccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEG-LLSLE 592 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R--Glig~~~~~c~~f~typ~tyDl~H~~~-~~~~~ 592 (667)
..|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ .+-=+..|.. .++. +.+||+|.|.. +|...
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG-----TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCCC-SCCEEEEEECTTGGGGS
T ss_pred CcEEEeCCcCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCCc-cCCcCEEEEcCchhhhc
Confidence 5799999999999999987422 45555554 555555554 2222223332 2443 78999999987 77766
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEcC-------------------------------------------------
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------------------------------------- 623 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------------------------------------------- 623 (667)
. +.-....+|-++-|+|+|||++++.+-
T Consensus 125 ~---~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (263)
T 3pfg_A 125 A---GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDR 201 (263)
T ss_dssp C---HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTT
T ss_pred C---CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCC
Confidence 4 333455789999999999999999520
Q ss_pred ------------HHHHHHHHHHHhhCCCeeEEeeeccCCCccEEEEEcc
Q 005959 624 ------------ARLIESARALTTRLKWDARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 624 ------------~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~~K~ 660 (667)
.-..++++.+++.--+++...... .....++|++|+
T Consensus 202 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~ 249 (263)
T 3pfg_A 202 GITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEEC
T ss_pred cEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecC
Confidence 002688889999988887765322 235678999997
No 256
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.30 E-value=6.2e-07 Score=87.26 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=89.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccccCC---CCCC-CccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAF---PTYP-RTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c~~f---~typ-~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++.+|.+. .. +|+-+|-. ..+..+-+++-+.....-.+.+ +..+ .+||+|.+..++.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR--GI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT--TC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-
T ss_pred CEEEEeCCCCCHHHHHHHHC--CC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-
Confidence 68999999999999999873 22 45555554 6677777775433322111112 2233 4599999998887
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEcCH--------------------------------HHHHHHHHHHhhCCC
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------------------------RLIESARALTTRLKW 639 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------------------------------~~~~~~~~~~~~~~W 639 (667)
. .....+|-|+-|+|+|||++++.+.. ...++++++++.--+
T Consensus 128 -~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 128 -H-----QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp -S-----SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred -h-----hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 2 34557999999999999999996431 146888889999899
Q ss_pred eeEEeeeccC-----CCccEEEEEcc
Q 005959 640 DARVIEIESN-----SDERLLICQKP 660 (667)
Q Consensus 640 ~~~~~~~~~~-----~~~~~li~~K~ 660 (667)
++........ +..-++|++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 202 RLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred eEEEEecCCCCCCCCceeEEEEeecC
Confidence 8776543221 12456777774
No 257
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.27 E-value=1.6e-06 Score=88.79 Aligned_cols=84 Identities=17% Similarity=0.121 Sum_probs=65.1
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCceEEeec
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFA 307 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~d 307 (667)
....+.+.+.+....+ .+|||||||+|.+|..|++++ ..|+++|.++.|++.++++. .++.+..+|
T Consensus 15 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D 83 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKT--------DTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcc
Confidence 3455566666654443 799999999999999999985 46999999999999988762 467788899
Q ss_pred ccCCCCCC----CCccEEEeccc
Q 005959 308 SKQLPYPS----LSFDMLHCARC 326 (667)
Q Consensus 308 a~~Lpfpd----~sFDlV~~s~~ 326 (667)
+..+++++ +.|| |+++.-
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEECC
T ss_pred hHhCCHHHhccCCCeE-EEecCC
Confidence 99888753 4688 666643
No 258
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.27 E-value=3.7e-07 Score=87.35 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=76.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--c-ccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--V-GVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--i-g~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-+ .|+ + -+..|..+ ++. +.+||+|.+..+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~ 106 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY-----DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVV 106 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESC
T ss_pred CeEEEEcCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcch
Confidence 4899999999999999987422 44444443 33433332 232 1 12233332 343 789999999998
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC--------------HHHHHHHHHHHhhCCCeeEEee
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~ 645 (667)
+.... .-....+|-++-|+|+|||++++-+. .-.-++++++.+. |++...+
T Consensus 107 l~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 107 LMFLE----AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGGSC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhhCC----HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 87653 23456789999999999999877431 0134567777776 8877654
No 259
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=1.8e-06 Score=89.26 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=69.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH---cCCCceEEeecccCCCCCCCCccEEEecccccc-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD- 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~e---rgl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~- 329 (667)
..+|||||||+|.++..++++. ....+.++|++..+...... .+.++.....+++...++++.||+|+|..+ .+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a-pns 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG-ESS 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CCC
T ss_pred CCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc-cCc
Confidence 4689999999999999988762 24567788877432100100 122334444455556778889999999864 33
Q ss_pred ---cccCHH--HHHHHHHhcccCC-eEEEEEeCCC
Q 005959 330 ---WDQKDG--ILLLEVDRVLKPG-GYFVWTSPLT 358 (667)
Q Consensus 330 ---~~~d~~--~~L~Ei~RvLKPG-G~Lvis~p~~ 358 (667)
+.+... .+|..+.++|+|| |.|++-.+.+
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 333222 3578889999999 9999988764
No 260
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.23 E-value=8.7e-07 Score=85.58 Aligned_cols=131 Identities=8% Similarity=0.020 Sum_probs=89.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc--ccccccccccCCCCCCCccccccccCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG--lig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
..|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++. +-=+..|.. .++.-+.+||+|.+..++.+..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH-----QIEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC-----CEEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC
T ss_pred CeEEEecCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC
Confidence 4799999999999999998432 44444544 5555555552 211222322 2332248999999998887763
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEEcCH----------------HHHHHHHHHHhhCCCeeEEeeeccCCCccEEEE
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEIESNSDERLLIC 657 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~ 657 (667)
.-....+|-|+-|+|+|||++++.+.. ...++++.+++...|++.............++.
T Consensus 117 ----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~ 192 (203)
T 3h2b_A 117 ----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTA 192 (203)
T ss_dssp ----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEE
T ss_pred ----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhh
Confidence 235668999999999999999996421 236788899999999988776655533444433
No 261
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.21 E-value=4.2e-06 Score=90.62 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 296 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 296 (667)
..+|||.+||+|.++..++..+.. ...|+|+|+++.|++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 478999999999999888765321 1469999999999998875
Q ss_pred c----CC--CceEEeecccCCCCCCCCccEEEecccccccc---cCHHHHHHHHHhcccC--CeEEEEEeCCC
Q 005959 297 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 358 (667)
Q Consensus 297 r----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~---~d~~~~L~Ei~RvLKP--GG~Lvis~p~~ 358 (667)
+ ++ .+.+.+.|+..++.+ .+||+|+++--..... .+...+.+++.++||+ ||.+++.+...
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 4 55 467888898888776 4899999985522211 2234577777778877 88888877644
No 262
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.21 E-value=5.8e-06 Score=89.85 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=75.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 296 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 296 (667)
...|||.+||+|.++..++..+.. ...|+++|+++.|++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 478999999999998877764321 1459999999999998875
Q ss_pred c----CC--CceEEeecccCCCCCCCCccEEEecccccccc---cCHHHHHHHHHhcccC--CeEEEEEeCCC
Q 005959 297 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 358 (667)
Q Consensus 297 r----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~---~d~~~~L~Ei~RvLKP--GG~Lvis~p~~ 358 (667)
+ |+ .+.+.++|+..++.++ +||+|+++.-..... .+...+..++.++||+ ||.+++.+...
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4 44 3678889999888764 899999994411111 2233466666677766 88888877643
No 263
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.20 E-value=1.1e-06 Score=89.78 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=66.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
..|||+|||.|+++.+|.+. .+. +|+-+|-. ..+..+-++ |+..-+.-.+..+..+|.+||+|.+..+|.+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEK-YDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEECCcccHHHHHHHHH-cCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 47999999999999999842 233 45555544 566555554 4322111112222234489999999999887
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. .-....+|-|+-|+|+|||.+++.+
T Consensus 142 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FG----HERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TC----TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC----hHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 63 1345678999999999999999864
No 264
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.18 E-value=8.8e-07 Score=91.88 Aligned_cols=137 Identities=16% Similarity=0.108 Sum_probs=90.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----cccc---c-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGli---g-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
..|||+|||.|.++.+|.....+- .+|+-+|-. ..+..+-+ .|+- - +..|..+ ++ ++.+||+|.+..
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 469999999999999984211221 134444443 44444433 3332 1 2233333 33 348999999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH---------------------------------------HHHH
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------------------------------RLIE 628 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------------------------------~~~~ 628 (667)
++.+.. +.-....+|-|+-|+|||||++++.+-. ...+
T Consensus 196 ~~~~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEP---DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCC---CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcC---CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 887764 3333335799999999999999987611 1367
Q ss_pred HHHHHHhhCCCeeEEeeeccCCCccEEEEEcc
Q 005959 629 SARALTTRLKWDARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 629 ~~~~~~~~~~W~~~~~~~~~~~~~~~li~~K~ 660 (667)
+++++++.--++...........-.+++++||
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 88888888889887665444445678899986
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.17 E-value=8.8e-06 Score=85.61 Aligned_cols=105 Identities=8% Similarity=-0.067 Sum_probs=73.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCCCCC---CCccEEEec-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPS---LSFDMLHCA- 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lpfpd---~sFDlV~~s- 324 (667)
+.+|||+|||+|..+..+++.-.....|+++|.++.+++.++++ ++ ++.+..+|+..++... ++||.|++.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcC
Confidence 37999999999999999997521235799999999999877654 54 4667778877775432 579999972
Q ss_pred ---c-cccccc-----------cCH-------HHHHHHHHhcccCCeEEEEEeCCCC
Q 005959 325 ---R-CGVDWD-----------QKD-------GILLLEVDRVLKPGGYFVWTSPLTN 359 (667)
Q Consensus 325 ---~-~ll~~~-----------~d~-------~~~L~Ei~RvLKPGG~Lvis~p~~~ 359 (667)
. ..+... .+. ..+|..+.++|+ ||+++.++-...
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 1 111110 111 246777888887 999999876544
No 266
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.16 E-value=2.7e-06 Score=83.21 Aligned_cols=138 Identities=12% Similarity=0.083 Sum_probs=87.5
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------------cccccccccccCCCCCCCcccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------------GFVGVLHDWCEAFPTYPRTYDL 582 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------------Glig~~~~~c~~f~typ~tyDl 582 (667)
-.+|||+|||.|.++.+|.+.. +. -+|+-+|-. ..+..+-++ .+-=+..|. +..+.-+.+||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SF--EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDA 105 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TC--CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CC--CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCE
Confidence 3589999999999999998632 21 234444443 444444333 221122233 223323479999
Q ss_pred ccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCHH----------------------HHHHHH----HHHhh
Q 005959 583 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR----------------------LIESAR----ALTTR 636 (667)
Q Consensus 583 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~----------------------~~~~~~----~~~~~ 636 (667)
|.|..++..... -.+..+|-|+-|+|+|||.+|.....+ .-++++ .+++.
T Consensus 106 V~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 181 (219)
T 3jwg_A 106 ATVIEVIEHLDE----NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEK 181 (219)
T ss_dssp EEEESCGGGCCH----HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHH
T ss_pred EEEHHHHHhCCH----HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHH
Confidence 999999887641 234578999999999999888643221 123334 77777
Q ss_pred CCCeeEEeeeccC-----CCccEEEEEccc
Q 005959 637 LKWDARVIEIESN-----SDERLLICQKPF 661 (667)
Q Consensus 637 ~~W~~~~~~~~~~-----~~~~~li~~K~~ 661 (667)
--+++.....-+. ...++.||+|.=
T Consensus 182 ~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 182 YGYSVRFLQIGEIDDEFGSPTQMGVFTLGA 211 (219)
T ss_dssp HTEEEEEEEESCCCTTSCCSEEEEEEEECC
T ss_pred CCcEEEEEecCCccccCCCCeEEEEEeccC
Confidence 7888877644332 257899999863
No 267
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.15 E-value=4.3e-06 Score=90.60 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=73.8
Q ss_pred CCEEEEeCCCCchHHHHHhhc----------------CCceeEEEEecCC-----------HHHHHHHHH-cC--CCceE
Q 005959 254 VRTILDIGCGYGSFGAHLFSK----------------ELLTMCIANYEAS-----------GSQVQLTLE-RG--LPAMI 303 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~----------------g~~~~sV~gvD~S-----------~~ml~~A~e-rg--l~~~~ 303 (667)
..+|+|+||++|..|..+... ..+...|...|.. +.+.+.+.+ .+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999998877654 1245778888877 444443322 23 23445
Q ss_pred Eeec---ccCCCCCCCCccEEEecccccccccCHH---------------------------------------HHHHHH
Q 005959 304 GSFA---SKQLPYPSLSFDMLHCARCGVDWDQKDG---------------------------------------ILLLEV 341 (667)
Q Consensus 304 ~~~d---a~~Lpfpd~sFDlV~~s~~ll~~~~d~~---------------------------------------~~L~Ei 341 (667)
..+. ...-.||+++||+|+++.+ +||..+.. .+|+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 3335689999999999988 99974432 125666
Q ss_pred HhcccCCeEEEEEeCCCCh
Q 005959 342 DRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 342 ~RvLKPGG~Lvis~p~~~~ 360 (667)
.+.|+|||.++++..+...
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 8999999999999887644
No 268
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.15 E-value=7.1e-07 Score=91.43 Aligned_cols=93 Identities=17% Similarity=0.065 Sum_probs=62.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccccCCCCCCCccccccccCccccccCC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 595 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~~ 595 (667)
.+|||+|||.|.++..|.+.... |+-+|-. ..+..+-++.=|-..+.=-|.++.=+.+||+|.|..+|. |.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~-----v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h-~~-- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFER-----VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMH-WF-- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSE-----EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCT-TC--
T ss_pred CCEEEEcCCCCHHHHHHHHhCCE-----EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehh-Hh--
Confidence 37999999999999999874433 4444443 444444333212222222344443348999999998883 43
Q ss_pred CCCCCcchhheeccccccCCcEEEEE
Q 005959 596 RHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
+.+..+-|+-|+|||||.+++-
T Consensus 113 ----~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 ----DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEE
Confidence 2457899999999999999873
No 269
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.15 E-value=1.7e-06 Score=85.33 Aligned_cols=117 Identities=12% Similarity=0.062 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhH
Q 005959 479 ENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI 557 (667)
Q Consensus 479 ~~w~~~v~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~ 557 (667)
..|...+..+.+.+...+ ..-.+|||+|||.|.++..|.+... +|+-+|-. ..+..+
T Consensus 21 ~~~~~~~~~~~~~l~~~~-----------------~~~~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRT-----------------PEASSLLDVACGTGTHLEHFTKEFG-----DTAGLELSEDMLTHA 78 (239)
T ss_dssp CCHHHHHHHHHHHHHHHC-----------------TTCCEEEEETCTTSHHHHHHHHHHS-----EEEEEESCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhc-----------------CCCCeEEEecccCCHHHHHHHHhCC-----cEEEEeCCHHHHHHH
Confidence 556666666666665433 1135799999999999999987422 44555554 455555
Q ss_pred hccc--ccccccccccCCCCCCCccccccccC-ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 558 LDRG--FVGVLHDWCEAFPTYPRTYDLVHAEG-LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 558 ~~RG--lig~~~~~c~~f~typ~tyDl~H~~~-~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
-++. +--+..|.. .++. +.+||+|.|.. ++.+.. +.-....+|-++-|+|+|||.+++.+
T Consensus 79 ~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 79 RKRLPDATLHQGDMR-DFRL-GRKFSAVVSMFSSVGYLK---TTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHCTTCEEEECCTT-TCCC-SSCEEEEEECTTGGGGCC---SHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHhCCCCEEEECCHH-Hccc-CCCCcEEEEcCchHhhcC---CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 5442 211222332 2343 68999999643 666553 22345678999999999999999963
No 270
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.15 E-value=1.2e-05 Score=87.22 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=76.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 296 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 296 (667)
...+||.+||+|.++..++..+.. ...++++|+++.|++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 378999999999998887754321 1459999999999998875
Q ss_pred c----CC--CceEEeecccCCCCCCCCccEEEecccccccc---cCHHHHHHHHHhcccC--CeEEEEEeCCC
Q 005959 297 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 358 (667)
Q Consensus 297 r----gl--~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~---~d~~~~L~Ei~RvLKP--GG~Lvis~p~~ 358 (667)
+ |+ .+.+.+.|+..++.++ +||+|+++--.-.-. .+...+..++.+.||+ ||.+++.++..
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 4 44 3678888999888764 899999984411111 2234577777777776 99988887743
No 271
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.14 E-value=6.9e-06 Score=88.71 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=71.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhc--------------CCceeEEEEecCCHHHHHHHHHc-----------------CCCc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK--------------ELLTMCIANYEASGSQVQLTLER-----------------GLPA 301 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~--------------g~~~~sV~gvD~S~~ml~~A~er-----------------gl~~ 301 (667)
...+|+|+|||+|..|..++.. ..+...|...|...+.....-+. +.+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3578999999999999887321 12356777778765553221110 0011
Q ss_pred eEEe---ecccCCCCCCCCccEEEecccccccccC--------------------------------------HHHHHHH
Q 005959 302 MIGS---FASKQLPYPSLSFDMLHCARCGVDWDQK--------------------------------------DGILLLE 340 (667)
Q Consensus 302 ~~~~---~da~~Lpfpd~sFDlV~~s~~ll~~~~d--------------------------------------~~~~L~E 340 (667)
.+.. +....-.||+++||+|+++.+ +||..+ ...+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 223334589999999999988 899752 2346888
Q ss_pred HHhcccCCeEEEEEeCCCCh
Q 005959 341 VDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 341 i~RvLKPGG~Lvis~p~~~~ 360 (667)
..+.|+|||.++++......
T Consensus 211 ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCC
T ss_pred HHHHhCCCCEEEEEEecCCC
Confidence 99999999999999876543
No 272
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.13 E-value=2.6e-06 Score=82.36 Aligned_cols=129 Identities=19% Similarity=0.214 Sum_probs=83.5
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cc-cccccccCCCCCCCccccccccCc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig-~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
+|||+|||.|.++..|.+. + -.+|+-+|-. ..+..+-++ |+ +- +..|..+ ++.-+.+||+|.+..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--S--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN-IPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--S--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB-CSSCTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHc--C--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH-CCCCcccccEEEECch
Confidence 8999999999999999873 2 2355555654 555555444 33 11 2233322 3322389999999988
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC------------------------------HHHHHHHHHHHhhCC
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------------------ARLIESARALTTRLK 638 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------------------------~~~~~~~~~~~~~~~ 638 (667)
+.++. ....+|-|+-|+|+|||.+++.+. ....++++.+++.--
T Consensus 121 l~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 194 (219)
T 3dlc_A 121 VFFWE------DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIG 194 (219)
T ss_dssp GGGCS------CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHT
T ss_pred Hhhcc------CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcC
Confidence 87663 345789999999999999999742 122366777777777
Q ss_pred CeeEEeeeccCCCccEEEEEc
Q 005959 639 WDARVIEIESNSDERLLICQK 659 (667)
Q Consensus 639 W~~~~~~~~~~~~~~~li~~K 659 (667)
++......++ ....++..|
T Consensus 195 f~~v~~~~~~--~~~~~~~~k 213 (219)
T 3dlc_A 195 ISSYEIILGD--EGFWIIISK 213 (219)
T ss_dssp CSSEEEEEET--TEEEEEEBC
T ss_pred CCeEEEEecC--CceEEEEec
Confidence 8755443222 233445544
No 273
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.13 E-value=5.7e-06 Score=85.55 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=65.9
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--CCceEEeecc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFAS 308 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da 308 (667)
....+.+.+.+... .. +|||||||+|.+|..|++++ ..|+++|.++.|++.++++. .++.+..+|+
T Consensus 33 ~~i~~~Iv~~~~~~--------~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~ 100 (271)
T 3fut_A 33 EAHLRRIVEAARPF--------TG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA 100 (271)
T ss_dssp HHHHHHHHHHHCCC--------CS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCG
T ss_pred HHHHHHHHHhcCCC--------CC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECCh
Confidence 34455566655421 34 89999999999999999986 46899999999999998763 3577888999
Q ss_pred cCCCCCCC-CccEEEeccc
Q 005959 309 KQLPYPSL-SFDMLHCARC 326 (667)
Q Consensus 309 ~~Lpfpd~-sFDlV~~s~~ 326 (667)
..+++++. .||.|+++.-
T Consensus 101 l~~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 101 LLYPWEEVPQGSLLVANLP 119 (271)
T ss_dssp GGSCGGGSCTTEEEEEEEC
T ss_pred hhCChhhccCccEEEecCc
Confidence 99888753 6999999854
No 274
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.13 E-value=2.1e-06 Score=80.47 Aligned_cols=127 Identities=14% Similarity=0.126 Sum_probs=84.3
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc--cccccccccccCCCCCCCccccccccCccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 592 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R--Glig~~~~~c~~f~typ~tyDl~H~~~~~~~~ 592 (667)
-.+|||+|||.|.++.+|.+. . - +|+-+|-. ..+..+-++ .+--+..| .+|+ +.+||+|.+..++...
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~--~--~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~--~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEF--A--T-KLYCIDINVIALKEVKEKFDSVITLSDP--KEIP--DNSVDFILFANSFHDM 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTT--E--E-EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSC--TTCEEEEEEESCSTTC
T ss_pred CCeEEEECCCCCHHHHHHHhh--c--C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCC--CCceEEEEEccchhcc
Confidence 468999999999999999862 2 2 66667765 566666555 22222333 4444 3799999999988766
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEcCH-------------HHHHHHHHHHhhCCCeeEEeeeccCCCccEEEEEc
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------RLIESARALTTRLKWDARVIEIESNSDERLLICQK 659 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~~K 659 (667)
. +...+|-|+-|+|+|||++++.+-. -..++++.+++ .|+..... +..+..-.+++.|
T Consensus 89 ~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~-~~~~~~~~l~~~~ 159 (170)
T 3i9f_A 89 D------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF-NPTPYHFGLVLKR 159 (170)
T ss_dssp S------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE-CSSTTEEEEEEEE
T ss_pred c------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc-CCCCceEEEEEec
Confidence 4 3457899999999999999996321 12456666666 66554432 2223445566655
Q ss_pred c
Q 005959 660 P 660 (667)
Q Consensus 660 ~ 660 (667)
+
T Consensus 160 ~ 160 (170)
T 3i9f_A 160 K 160 (170)
T ss_dssp C
T ss_pred C
Confidence 4
No 275
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.11 E-value=4.5e-06 Score=89.56 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=68.3
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CceEEeecccCCC--CCC------------
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPS------------ 315 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~Lp--fpd------------ 315 (667)
.+|||+|||+|.++..+++. ...|+++|.++.+++.|+++ ++ ++.+..+|+..+. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 68999999999999999875 34799999999999888653 44 4667777765542 221
Q ss_pred --CCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeCCC
Q 005959 316 --LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 316 --~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.+||+|++..-.. .+..++.+.|+++|.+++....+
T Consensus 292 ~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEESCH
T ss_pred ccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEECCH
Confidence 3799998753211 23456677778999988877643
No 276
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.10 E-value=9.6e-07 Score=87.02 Aligned_cols=92 Identities=20% Similarity=0.311 Sum_probs=64.2
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc---cccccccccccCCCCCCCccccccccCcccccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R---Glig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
.|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++--+..|..+.+ .+.+||+|++.+++.+..
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN-----DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS-----CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGCS
T ss_pred cEEEECCCCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhhc
Confidence 599999999999999987432 34444443 444444444 3222223333333 358999999999988765
Q ss_pred CCCCCCCcchhheecc-ccccCCcEEEEEc
Q 005959 594 GHRHRCSTLDIFTEID-RILRPEGWVIIRD 622 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~d-RiLRP~G~~i~~d 622 (667)
+...+|-|+- |+|+|||++++.+
T Consensus 118 ------~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 ------DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ------SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2357999999 9999999999965
No 277
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.09 E-value=1.7e-06 Score=84.38 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=87.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++.+|.+...+-. .|+-+|-. ..+..+-++ |+ -=+..|.. .++.-+.+||+|.+..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCSSCEEEEEEESC
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCCCCeeEEEeehh
Confidence 4799999999999999987421111 33444443 444444333 22 11222332 22322378999999998
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCH-------------HHHHHHHHHHhhCCCeeEEeeeccCCCccEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------RLIESARALTTRLKWDARVIEIESNSDERLL 655 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~l 655 (667)
+.... +...+|-|+-|+|+|||++++.+-. ...++++.+++.-.++..... +..+...++
T Consensus 116 l~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-~~~~~~~~~ 188 (219)
T 3dh0_A 116 FHELS------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV-EVGKYCFGV 188 (219)
T ss_dssp GGGCS------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE-EETTTEEEE
T ss_pred hhhcC------CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE-eeCCceEEE
Confidence 87764 2357899999999999999997411 225788888888889866553 223356677
Q ss_pred EEEcc
Q 005959 656 ICQKP 660 (667)
Q Consensus 656 i~~K~ 660 (667)
+++|+
T Consensus 189 ~~~k~ 193 (219)
T 3dh0_A 189 YAMIV 193 (219)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88876
No 278
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.08 E-value=9.5e-07 Score=87.97 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=78.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccc---cCCCCCCCccccccccCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWC---EAFPTYPRTYDLVHAEGLLSLE 592 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c---~~f~typ~tyDl~H~~~~~~~~ 592 (667)
.+|||+|||.|.|+.+|.+.+. +|+-+|-. ..+..+-++ +--+..|.. ++|+. .+||+|.+..++.+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~--~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI-----ESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPD--KYLDGVMISHFVEHL 114 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC-----CEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCT--TCBSEEEEESCGGGS
T ss_pred CeEEEEeCCCCHHHHHHHhCCC-----cEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCC--CCeeEEEECCchhhC
Confidence 5799999999999999987433 34444544 666666666 211222222 24543 899999999988776
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEcCH-------------------HHHHHHHHHHhhCCCeeEEe
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------RLIESARALTTRLKWDARVI 644 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------------~~~~~~~~~~~~~~W~~~~~ 644 (667)
. .-.+..+|-|+-|+|+|||++++.... -..++++.+++.--++....
T Consensus 115 ~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 D----PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp C----GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred C----cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 4 234567999999999999999996321 11256666666666665443
No 279
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.08 E-value=9.4e-06 Score=79.09 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=80.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhcccccccccccccCCCCCCCccccccccCccccccCCC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHR 596 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~~~ 596 (667)
.+|||+|||.|.++..|. ..|..+-+.+. .+.+ . .+ |. +.++.-+.+||+|.+..++. +.
T Consensus 69 ~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----~~~~--~---~~---d~-~~~~~~~~~fD~v~~~~~l~-~~--- 128 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR---NPVHCFDLASL----DPRV--T---VC---DM-AQVPLEDESVDVAVFCLSLM-GT--- 128 (215)
T ss_dssp SCEEEETCTTCHHHHHCC---SCEEEEESSCS----STTE--E---ES---CT-TSCSCCTTCEEEEEEESCCC-SS---
T ss_pred CeEEEECCcCCHHHHHhh---ccEEEEeCCCC----CceE--E---Ee---cc-ccCCCCCCCEeEEEEehhcc-cc---
Confidence 479999999999999884 34544444333 1111 1 11 21 11232247899999988874 22
Q ss_pred CCCCcchhheeccccccCCcEEEEEcCHH---HHHHHHHHHhhCCCeeEEeeeccCCCccEEEEEcc
Q 005959 597 HRCSTLDIFTEIDRILRPEGWVIIRDTAR---LIESARALTTRLKWDARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 597 ~~c~~~~~l~E~dRiLRP~G~~i~~d~~~---~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~~K~ 660 (667)
....+|-|+-|+|+|||++++.+-.. ..+++..+++..-+++...+. ....--+++++|.
T Consensus 129 ---~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 ---NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL-TNSHFFLFDFQKT 191 (215)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC-CSTTCEEEEEEEC
T ss_pred ---CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec-CCCeEEEEEEEec
Confidence 34678999999999999999986544 457788888888887766432 2223467778775
No 280
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.07 E-value=4.6e-06 Score=86.60 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=59.3
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCc-eeEEEEecCCHHHHHHHHHc-CCCceEEeecc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLER-GLPAMIGSFAS 308 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~-~~sV~gvD~S~~ml~~A~er-gl~~~~~~~da 308 (667)
....+.+.+.+....+ .+|||||||+|.++..|++++.. ...|+++|+++.|++.++++ ..++.+..+|+
T Consensus 28 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERG--------ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 3455566666654443 79999999999999999987432 13389999999999999876 33567888999
Q ss_pred cCCCCCC
Q 005959 309 KQLPYPS 315 (667)
Q Consensus 309 ~~Lpfpd 315 (667)
..+++++
T Consensus 100 ~~~~~~~ 106 (279)
T 3uzu_A 100 LTFDFGS 106 (279)
T ss_dssp GGCCGGG
T ss_pred hcCChhH
Confidence 9988764
No 281
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.06 E-value=3.7e-06 Score=90.38 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=77.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhc---------------CCceeEEEEecCCHHHHHHHHHcCC------CceEEee---cc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK---------------ELLTMCIANYEASGSQVQLTLERGL------PAMIGSF---AS 308 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~---------------g~~~~sV~gvD~S~~ml~~A~ergl------~~~~~~~---da 308 (667)
..-+|+|+||++|..|..+... ..+...|...|...+..+..-+.-. +..+..+ ..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999888776654 3456788899988877765543311 2244333 33
Q ss_pred cCCCCCCCCccEEEecccccccccCHH---------------------------------HHHHHHHhcccCCeEEEEEe
Q 005959 309 KQLPYPSLSFDMLHCARCGVDWDQKDG---------------------------------ILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 309 ~~Lpfpd~sFDlV~~s~~ll~~~~d~~---------------------------------~~L~Ei~RvLKPGG~Lvis~ 355 (667)
..-.||+++||+|+|+.+ +||..+.. .+|+...+.|+|||.++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 446699999999999988 89974421 34888899999999999998
Q ss_pred CCCCh
Q 005959 356 PLTNP 360 (667)
Q Consensus 356 p~~~~ 360 (667)
.+...
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76543
No 282
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.06 E-value=6.6e-05 Score=81.18 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=59.7
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEecccccccc-cC
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-QK 333 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~-~d 333 (667)
.+||.++-+.|.++..+... ..++.+..|....+..+.+|...... ..+..+...||+|+.-.- -+-. ..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~d~v~~~~P-k~k~~~~ 117 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLA----LPWEAAAGAYDLVVLALP-AGRGTAY 117 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEEC----CGGGSCTTCEEEEEEECC-GGGCHHH
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCcccc----CCccCCcCCCCEEEEECC-cchhHHH
Confidence 68999999999887777533 23455555665555566667665331 112234568999875411 0000 11
Q ss_pred HHHHHHHHHhcccCCeEEEEEeC
Q 005959 334 DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 334 ~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
....|.++.+.|+|||.+++...
T Consensus 118 ~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 118 VQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEEc
Confidence 35688899999999999998864
No 283
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.05 E-value=2.7e-06 Score=87.86 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=67.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc----ccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli----g~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.+. .+ .+|+-+|-. ..+..+-++ |+- -+..|+.+ + +.+||+|.+..
T Consensus 74 ~~vLDiGcG~G~~~~~la~~-~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~~~fD~v~~~~ 145 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAE-YD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-F---DEPVDRIVSLG 145 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-C---CCCCSEEEEES
T ss_pred CEEEEeeccCcHHHHHHHHh-CC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-c---CCCccEEEEcc
Confidence 47999999999999999873 13 244555544 556555444 432 22334432 3 78999999999
Q ss_pred ccccccCCC---CCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHR---HRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~---~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+|.+..... ..-....+|-|+-|+|+|||.+++.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 988774100 11334578999999999999999863
No 284
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.05 E-value=4.9e-06 Score=82.03 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=63.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cc-cccccccCCCCCCCccccccccC-c
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEG-L 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~c~~f~typ~tyDl~H~~~-~ 588 (667)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ |+ +- +..|.. .++ ++.+||+|.+.. +
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~~~-----~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPKFK-----NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLN-INRKFDLITCCLDS 111 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSS-----EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCC-CSCCEEEEEECTTG
T ss_pred CeEEEeCCCCCHHHHHHHHCCC-----cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCC-ccCCceEEEEcCcc
Confidence 4799999999999999987422 34555544 444444433 21 11 122222 233 348899999998 8
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
|.+.. ..-....+|-++-|+|+|||.+++
T Consensus 112 l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 112 TNYII---DSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCC---SHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccC---CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 87763 223456789999999999999998
No 285
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.04 E-value=1.2e-05 Score=77.96 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=75.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccc---cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG---VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig---~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++.+|.+ .+. .+|+-+|-. ..+..+-++ |+-. +..|+ ++..+.+||+|.++..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~--~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~fD~i~~~~~ 134 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHK--LGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSL---LADVDGKFDLIVANIL 134 (205)
T ss_dssp CEEEEETCTTSHHHHHHHH--TTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST---TTTCCSCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHH--CCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc---cccCCCCceEEEECCc
Confidence 4799999999999999886 322 134444543 444444443 4322 22233 2233589999999876
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCeeEEe
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
+... ..++-++-|+|+|||++++.+ .....+.+..++....++....
T Consensus 135 ~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 135 AEIL---------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp HHHH---------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred HHHH---------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 6543 368999999999999999974 3344667777777777776554
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.02 E-value=2e-05 Score=90.36 Aligned_cols=120 Identities=16% Similarity=0.116 Sum_probs=77.5
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchH---HHHHhhcCCceeEEEEecCCHHHHHHHH----HcCC--Cc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSF---GAHLFSKELLTMCIANYEASGSQVQLTL----ERGL--PA 301 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~---t~~La~~g~~~~sV~gvD~S~~ml~~A~----ergl--~~ 301 (667)
..|.+.+.+.+...............|||||||+|.+ +...++++...+.|+++|.++. ...|+ +.+. .+
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkV 413 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQV 413 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGE
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeE
Confidence 4555566655532211111112345799999999988 5555555545668999999974 33333 2333 46
Q ss_pred eEEeecccCCCCCCCCccEEEecccccccc-cCHHHHHHHHHhcccCCeEEE
Q 005959 302 MIGSFASKQLPYPSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFV 352 (667)
Q Consensus 302 ~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~-~d~~~~L~Ei~RvLKPGG~Lv 352 (667)
.++.++++.+..| +.+|+|++.....-.. +.....+....|.|||||.++
T Consensus 414 tVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 414 TVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 6788899998887 4899999974322111 223357788899999999976
No 287
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.02 E-value=1.1e-05 Score=79.49 Aligned_cols=138 Identities=13% Similarity=0.081 Sum_probs=87.7
Q ss_pred eEEEecccc-chhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc-ccc-cccc--ccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAH-FGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VGV-LHDW--CEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~-~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl-ig~-~~~~--c~~f~typ~tyDl~H~~ 586 (667)
.+|||+||| .|.++.+|... . .-+|+-+|-. ..+..+-+ .|+ +-+ ..|+ -++++ +.+||+|-++
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~--~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~I~~n 130 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKF--F--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV--EGTFDVIFSA 130 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHH--H--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC--CSCEEEEEEC
T ss_pred CEEEEcCCCHHHHHHHHHHHh--c--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc--cCceeEEEEC
Confidence 579999999 99999998873 1 1244444543 34443332 243 222 2232 23333 2899999988
Q ss_pred CccccccCC-------------CCCCCcchhheeccccccCCcEEEE--EcCHHHHHHHHHHHhhCCCeeEEeeeccCC-
Q 005959 587 GLLSLESGH-------------RHRCSTLDIFTEIDRILRPEGWVII--RDTARLIESARALTTRLKWDARVIEIESNS- 650 (667)
Q Consensus 587 ~~~~~~~~~-------------~~~c~~~~~l~E~dRiLRP~G~~i~--~d~~~~~~~~~~~~~~~~W~~~~~~~~~~~- 650 (667)
-.|...... .....+..++-++-|+|+|||++++ ....+..+++.++++...|++.......+.
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~ 210 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTR 210 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCe
Confidence 665432200 0111135688899999999999998 445577888999999999988877665554
Q ss_pred CccEEEEEcc
Q 005959 651 DERLLICQKP 660 (667)
Q Consensus 651 ~~~~li~~K~ 660 (667)
--.+++++|.
T Consensus 211 ~~~~l~f~~~ 220 (230)
T 3evz_A 211 WRHSLIFFKG 220 (230)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEecc
Confidence 3567777764
No 288
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.02 E-value=2.3e-05 Score=79.83 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=63.2
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-CCCceEEeeccc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASK 309 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-gl~~~~~~~da~ 309 (667)
....+.+.+.+.... ..+|||||||+|.++..|++++ ...++++|.++.|++.++++ ..++.+..+|+.
T Consensus 17 ~~i~~~iv~~~~~~~--------~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 17 EGVLKKIAEELNIEE--------GNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHHHHTTCCT--------TCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT
T ss_pred HHHHHHHHHhcCCCC--------cCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchh
Confidence 345556666665433 3799999999999999999884 35799999999999999876 224578889999
Q ss_pred CCCCCCCC-ccEEEecc
Q 005959 310 QLPYPSLS-FDMLHCAR 325 (667)
Q Consensus 310 ~Lpfpd~s-FDlV~~s~ 325 (667)
.+++++.. ...|+++.
T Consensus 87 ~~~~~~~~~~~~vv~Nl 103 (249)
T 3ftd_A 87 KFPFCSLGKELKVVGNL 103 (249)
T ss_dssp TCCGGGSCSSEEEEEEC
T ss_pred hCChhHccCCcEEEEEC
Confidence 98887532 22555553
No 289
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.01 E-value=1.3e-06 Score=86.95 Aligned_cols=122 Identities=16% Similarity=0.115 Sum_probs=81.2
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc-----ccccccccccCCCCCCCccccccccCcc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----FVGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG-----lig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
-.+|||+|||.|.++..|++.. .-+|+-+|-. ..+..+-++- +--+..|..+ ++.-+.+||+|.+..++
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 168 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL----YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQWTA 168 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH----CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHhh----cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEcchh
Confidence 4589999999999999998631 1134444543 4555554442 1112233332 33324799999999988
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEcCH----------------HHHHHHHHHHhhCCCeeEEeee
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEI 646 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~ 646 (667)
.++. . -....+|-|+-|+|+|||++++.+.. ...++++++++.--++......
T Consensus 169 ~~~~---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 169 IYLT---D-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GGSC---H-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hhCC---H-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 7763 1 23557899999999999999997631 1246778888888888765543
No 290
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.00 E-value=1.1e-05 Score=87.17 Aligned_cols=96 Identities=16% Similarity=0.059 Sum_probs=71.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-------------------CCC-ceEEeecccCCCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------------------GLP-AMIGSFASKQLPY 313 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er-------------------gl~-~~~~~~da~~Lpf 313 (667)
+.+|||+|||+|.++..++++. ....|+++|.++.+++.++++ ++. +.+..+|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4789999999999999999872 234699999999999877643 443 5666677654421
Q ss_pred -CCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 314 -PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 314 -pd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
..++||+|++.-- .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP~-----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF-----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1357999996521 123578999999999999988875
No 291
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.99 E-value=5.8e-06 Score=79.60 Aligned_cols=142 Identities=11% Similarity=-0.000 Sum_probs=79.2
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c--ccccccccccCCCC---CCCccccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--FVGVLHDWCEAFPT---YPRTYDLVHA 585 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G--lig~~~~~c~~f~t---yp~tyDl~H~ 585 (667)
=.+|||+|||.|.++.+|.+.... .+|+-+|-. ..+..+-++ | +-=+..|..++++. .+.+||+|.+
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPG---VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTT---EEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCEEEEecCCHhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 358999999999999999874212 133333332 223222221 2 22233455554442 2378999999
Q ss_pred cCccccccCC----------CCCCC----------cchhheeccccccCCcE-EEEEcCHHHHHHHHHHHh--hCCCeeE
Q 005959 586 EGLLSLESGH----------RHRCS----------TLDIFTEIDRILRPEGW-VIIRDTARLIESARALTT--RLKWDAR 642 (667)
Q Consensus 586 ~~~~~~~~~~----------~~~c~----------~~~~l~E~dRiLRP~G~-~i~~d~~~~~~~~~~~~~--~~~W~~~ 642 (667)
+--|...... ..... +..++-++-|+|+|||+ +++.-.....+++..+.. .-.|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 6554321100 00011 15788999999999999 777555555667777777 5556543
Q ss_pred EeeeccCCCccEEEEEcc
Q 005959 643 VIEIESNSDERLLICQKP 660 (667)
Q Consensus 643 ~~~~~~~~~~~~li~~K~ 660 (667)
....+..+..++++++|.
T Consensus 188 ~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CEEECTTSCEEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEEc
Confidence 333334445788888764
No 292
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.99 E-value=2.9e-06 Score=82.71 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=68.6
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc----cccc-ccccccCCCCCCCccccccccCc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGV-LHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG----lig~-~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.-.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++. -+-+ ..|. +.++ -+.+||+|.|..+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC-----KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEV 123 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE-----EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESC
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC-----CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccH
Confidence 45789999999999999998731 366666664 5555554442 1222 2232 2233 2589999999999
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+.+.. +.-.+..+|-|+-|+|+|||++++.+
T Consensus 124 l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 124 LYYLE---DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GGGSS---SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhCC---CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 88765 33344567999999999999999964
No 293
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.99 E-value=1.8e-06 Score=86.08 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=65.4
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cc-cccccccCCCCCCCccccccccC
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
-.+|||+|||.|.++.+|.+... +|+-+|-. ..+..+-+ .|+ +- +..|. +.++.-+.+||+|.+..
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRY 95 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEES
T ss_pred CCEEEEEccCcCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECC
Confidence 35799999999999999987422 45555544 44444333 233 11 22233 33443348999999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
++.++. +...+|-|+-|+|+|||++++.+
T Consensus 96 ~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHFS------DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcc------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 887664 34678999999999999999964
No 294
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.99 E-value=2.9e-06 Score=91.81 Aligned_cols=153 Identities=8% Similarity=0.072 Sum_probs=105.0
Q ss_pred cccCccccccchhhhHHHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEEeccccchhhhhhhhhcCCCeEEEEee
Q 005959 467 YGVHPEEFAEDTENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVV 546 (667)
Q Consensus 467 ~~~~~~~f~~d~~~w~~~v~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~ 546 (667)
+......|...+..|......+.+.+-..+. + ..=..|||+|||.|.++.+|.+. .. +|+
T Consensus 74 y~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~-------------~--~~~~~VLDiGcG~G~~~~~l~~~--g~---~v~ 133 (416)
T 4e2x_A 74 FHEVYPYHSSGSSVMREHFAMLARDFLATEL-------------T--GPDPFIVEIGCNDGIMLRTIQEA--GV---RHL 133 (416)
T ss_dssp SSTTCCCCGGGCHHHHHHHHHHHHHHHHTTT-------------C--SSSCEEEEETCTTTTTHHHHHHT--TC---EEE
T ss_pred ccCCccCcCcCCHHHHHHHHHHHHHHHHHhC-------------C--CCCCEEEEecCCCCHHHHHHHHc--CC---cEE
Confidence 3334555667778898888888776544431 1 12348999999999999999873 32 566
Q ss_pred cCCCC-CchhhHhccccccccccc----ccCCCCCCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 547 PTIGT-NHLPMILDRGFVGVLHDW----CEAFPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 547 p~~~~-~~l~~~~~RGlig~~~~~----c~~f~typ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
-+|-. +.+..+-++|+-.....+ .+.++.-+.+||+|.+.++|.+.. +...+|-|+-|+|+|||++++.
T Consensus 134 gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~------d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 134 GFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP------YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp EECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcC------CHHHHHHHHHHHcCCCeEEEEE
Confidence 66665 778888888753322111 111221138999999999998774 3568999999999999999997
Q ss_pred cCH--------------------HHHHHHHHHHhhCCCeeEEee
Q 005959 622 DTA--------------------RLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 622 d~~--------------------~~~~~~~~~~~~~~W~~~~~~ 645 (667)
... ...++++.+++.--+++....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 208 DPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp EECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred eCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 421 113577888888888766554
No 295
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.98 E-value=3.7e-06 Score=83.30 Aligned_cols=120 Identities=13% Similarity=0.004 Sum_probs=80.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccc----cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig----~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.+. . .+|+-+|-. ..+..+-++ |... +..|..+.. .+.+||+|.+..
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~ 140 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP--E---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--PTELFDLIFDYV 140 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT--T---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--CSSCEEEEEEES
T ss_pred CCEEEeCCCCCHHHHHHHhC--C---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--CCCCeeEEEECh
Confidence 38999999999999999863 2 234555544 444444333 2211 223333322 236899999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-----------HHHHHHHHHHhhCCCeeEEeeec
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------RLIESARALTTRLKWDARVIEIE 647 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~~~~~~~~~~~~~~W~~~~~~~~ 647 (667)
+|.... ......+|-++-|+|+|||++++.+-. -..++++.+++.--|+....+..
T Consensus 141 ~l~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 141 FFCAIE----PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp STTTSC----GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred hhhcCC----HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 887653 234567899999999999999985321 13578888899888987765443
No 296
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.98 E-value=2.1e-05 Score=76.64 Aligned_cols=132 Identities=15% Similarity=0.194 Sum_probs=83.7
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc---cccccccccccCCCCCCCccccccccCcccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R---Glig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
-..|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ .+--+..|..+ ++. +.+||+|.+..++..
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR-----TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FEV-PTSIDTIVSTYAFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC-----EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CCC-CSCCSEEEEESCGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC-----eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cCC-CCCeEEEEECcchhc
Confidence 35899999999999999987322 44555544 445545444 22222223322 232 389999999998877
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEcC----HH---------------------------HHHHHHHHHhhCCCe
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----AR---------------------------LIESARALTTRLKWD 640 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----~~---------------------------~~~~~~~~~~~~~W~ 640 (667)
... . ....+|-|+-|+|+|||++++.+. .. ..++++++++.--++
T Consensus 119 ~~~---~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 119 LTD---D-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp SCH---H-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred CCh---H-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 651 1 112388999999999999999742 11 126677788888887
Q ss_pred eEEeeeccCCCccEEEEEcc
Q 005959 641 ARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 641 ~~~~~~~~~~~~~~li~~K~ 660 (667)
+..... .+-.=++.++|+
T Consensus 195 v~~~~~--~~~~w~~~~~~~ 212 (220)
T 3hnr_A 195 VTFTRL--NHFVWVMEATKQ 212 (220)
T ss_dssp EEEEEC--SSSEEEEEEEEC
T ss_pred EEEeec--cceEEEEeehhh
Confidence 665532 222335555554
No 297
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.98 E-value=2.2e-06 Score=85.57 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=63.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----cccc---c-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGli---g-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++.+|.+. ... +|+-+|-. ..+..+-+ .|+- - +..|+.+ ++. +.+||+|.|.+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARD-HGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACVG 111 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHH-TCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHh-cCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEECC
Confidence 47999999999999999863 121 33444443 44444433 3431 1 2233332 333 68999999988
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
++.... +...+|-|+-|+|||||++++.+
T Consensus 112 ~~~~~~------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIAG------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGTS------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhcC------CHHHHHHHHHHHcCCCeEEEEec
Confidence 776553 35678999999999999999964
No 298
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.98 E-value=7.6e-06 Score=92.46 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=74.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcC---C--------------ceeEEEEecCCHHHHHHHHHc----CCC------ceEEee
Q 005959 254 VRTILDIGCGYGSFGAHLFSKE---L--------------LTMCIANYEASGSQVQLTLER----GLP------AMIGSF 306 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g---~--------------~~~sV~gvD~S~~ml~~A~er----gl~------~~~~~~ 306 (667)
..+|||.+||+|.++..+++.- . ....++|+|+++.+++.|+.+ ++. ..+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 4789999999999988776541 0 123699999999999988753 444 456767
Q ss_pred cccCCC-CCCCCccEEEecccccccc------------cC-HHHHHHHHHhcccCCeEEEEEeC
Q 005959 307 ASKQLP-YPSLSFDMLHCARCGVDWD------------QK-DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 307 da~~Lp-fpd~sFDlV~~s~~ll~~~------------~d-~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
|+...+ .+.+.||+|+++.-..... .+ ...++..+.+.|||||++++..|
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 754433 3457899999985422111 01 13689999999999999999877
No 299
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.97 E-value=5.2e-06 Score=86.21 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=65.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++..|.+. ... +|+-+|-. ..+..+-++ |+-..+.-.+..+..+|.+||+|.+..+|.+
T Consensus 92 ~~vLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVER-FDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEEcccchHHHHHHHHH-CCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 37999999999999999863 122 44555544 555555544 4422111112222333589999999998876
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. .-....+|-|+-|+|+|||.+++.+
T Consensus 168 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FG----HENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TC----GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC----HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 63 1245578999999999999999863
No 300
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.96 E-value=1.9e-05 Score=82.49 Aligned_cols=114 Identities=17% Similarity=0.189 Sum_probs=76.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc--ccc----cccccc-cCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVG----VLHDWC-EAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG--lig----~~~~~c-~~f~typ~tyDl~H~~~~ 588 (667)
++|||+|||+|+|+..|++.+ . -.|+-+|-. ++|...+.+- ++. -+.... +.++. .+||++-|+-.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~g--a--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~d~s 160 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNG--A--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASIDVS 160 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTT--C--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEECCS
T ss_pred cEEEecCCCccHHHHHHHhCC--C--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC--CCCCEEEEEee
Confidence 589999999999999998732 1 134555554 7776644321 110 111111 22332 45999999888
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC----------------------HHHHHHHHHHHhhCCCeeEEee
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----------------------ARLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----------------------~~~~~~~~~~~~~~~W~~~~~~ 645 (667)
|... ..+|-|+-|+|+|||.+|+--+ ...++++..++...-|.+....
T Consensus 161 f~sl---------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 161 FISL---------NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp SSCG---------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HhhH---------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 7644 3699999999999999987410 1367888899999999877654
No 301
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.96 E-value=1.4e-05 Score=75.06 Aligned_cols=115 Identities=17% Similarity=0.164 Sum_probs=77.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+. .+- ..|+-+|-. ..+..+-++ |+ +-+..|..+.++..+.+||+|.++..
T Consensus 27 ~~vldiG~G~G~~~~~l~~~-~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRS-TPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTT-SSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CeEEEeCCCCCHHHHHHHHH-CCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc
Confidence 58999999999999999863 221 234444543 445444433 43 22334555666665588999998777
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCeeEEe
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 644 (667)
+.. ..++-++-|+|+|||.+++.+. .+....+..+.+...+++...
T Consensus 104 ~~~----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 104 LTA----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TTC----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEEE
T ss_pred ccH----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEEE
Confidence 654 3589999999999999999764 455667777777776665543
No 302
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.96 E-value=2.8e-06 Score=81.97 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=78.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-----cccccccccccCCCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----Glig~~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
.+|||+|||.|.++..|.+.... +|+-+|-. ..+..+-++ .+--+..|..+ ++.-+.+||+|.+..+|.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP----NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC----CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC----cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchh
Confidence 47999999999999999874321 33334433 333333332 12122233333 222237999999988886
Q ss_pred cccCCC---------CCCCcchhheeccccccCCcEEEEEcCHHHHHHHHHHH--hhCCCeeEEeeeccCCCccEEEEEc
Q 005959 591 LESGHR---------HRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALT--TRLKWDARVIEIESNSDERLLICQK 659 (667)
Q Consensus 591 ~~~~~~---------~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~--~~~~W~~~~~~~~~~~~~~~li~~K 659 (667)
...+.. +......+|-|+-|+|+|||.+++.+-...- ..+.+. ....|+......+++..-.+.+++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHK 197 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcceEEEEEEEe
Confidence 543100 0123468999999999999999998654321 112222 3346876655443333334555554
No 303
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.95 E-value=3.5e-06 Score=84.76 Aligned_cols=95 Identities=21% Similarity=0.161 Sum_probs=65.0
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccccccccCCCCCCCccccccccC
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
-.+|||+|||.|.++..|.+... .|+-+|-. ..+..+-++ |+ --+..|..+ +|.-+.+||+|++..
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFVK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MPFTDERFHIVTCRI 111 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CCSCTTCEEEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh-CCCCCCCEEEEEEhh
Confidence 45899999999999999987422 55555544 455444332 43 112233322 332238999999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
++..+. +...+|-|+-|+|||||++++.+
T Consensus 112 ~l~~~~------d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP------NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 887664 34578999999999999999963
No 304
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.95 E-value=2.7e-06 Score=87.30 Aligned_cols=95 Identities=23% Similarity=0.364 Sum_probs=65.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.+. .+. +|+-+|-. ..+..+-+ .|+ +- +..|..+ +|.-+.+||+|++..
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRK-FGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE-IPCEDNSYDFIWSQD 158 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS-CSSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHH-hCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc-CCCCCCCEeEEEecc
Confidence 48999999999999999873 122 45555554 55554443 343 11 2223322 332237999999999
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
++.++. + ...+|-|+-|+|||||++++.+
T Consensus 159 ~l~~~~---~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHSP---D---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGCS---C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcC---C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 988775 3 5689999999999999999974
No 305
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.95 E-value=6.9e-06 Score=77.67 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=83.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc--ccccccccccCCCCCCCcccccccc-Cccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAE-GLLSLE 592 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG--lig~~~~~c~~f~typ~tyDl~H~~-~~~~~~ 592 (667)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.++ .++...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH-----DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CeEEEECCCCCHHHHHHHHCCC-----cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4799999999999999987422 44444443 3344443332 2112223332 22213789999998 566544
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEcCH---HHHHHHHHHHhhCCCeeEEeeecc-------CCCccEEEEEcc
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---RLIESARALTTRLKWDARVIEIES-------NSDERLLICQKP 660 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---~~~~~~~~~~~~~~W~~~~~~~~~-------~~~~~~li~~K~ 660 (667)
. .-....+|-++-|+|+|||.+++.... ...+++..+++...+++....... ...--++|++|+
T Consensus 122 ~----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 A----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp C----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred C----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 2 122357889999999999999996432 246677778888788766553221 112336777764
No 306
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.93 E-value=1.7e-05 Score=86.28 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=72.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---ceEEeecccCCC--CCCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLP--YPSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~Lp--fpd~sFDlV~~s 324 (667)
+.+|||++||+|.++..++.+.-....|+++|.++.+++.++++ ++. +.+..+|+..+- ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 47899999999999999998521235799999999999887653 553 566777764431 124579999987
Q ss_pred ccccccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 325 ~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
- . .....++..+.+.|+|||+++++.
T Consensus 133 P--~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P--F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1 123468899999999999988876
No 307
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.92 E-value=3.6e-06 Score=84.10 Aligned_cols=116 Identities=13% Similarity=0.193 Sum_probs=77.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----cccc----ccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGli----g~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
..|||+|||.|.++..|.+.. +. .|+-+|-. ..+..+-+ .|+- -+..|. +.++.-+.+||+|++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~-~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYV-KG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHC-CS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEES
T ss_pred CeEEEeCCCCCHHHHHHHHhC-CC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecC
Confidence 389999999999999998742 32 44555544 45554433 3432 223344 44443348999999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-----------H----------HHHHHHHHHhhCCCeeEEe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARVI 644 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~----------~~~~~~~~~~~~~W~~~~~ 644 (667)
++.+. +...+|-|+-|+|||||++++.+.. . ..+++.++++.--++...+
T Consensus 123 ~l~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 123 AIYNI-------GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CSCCC-------CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hHhhc-------CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 87654 3457899999999999999997521 1 2355667777777765543
No 308
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.92 E-value=5.2e-06 Score=84.80 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=75.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc-cc-cccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl-ig-~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
..|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+|
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY-----DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVF 194 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSG
T ss_pred CcEEEECCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccch
Confidence 4799999999999999997422 45555544 44443333 343 11 1223322 232 6899999999998
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEcC--------------HHHHHHHHHHHhhCCCeeEEee
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~ 645 (667)
.... .-.+..+|-++-|+|+|||++++-.. .-.-++++++... |++...+
T Consensus 195 ~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 195 MFLN----RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GGSC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCC----HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 7653 23455799999999999999777321 0113456666665 8877654
No 309
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.92 E-value=2.1e-05 Score=74.67 Aligned_cols=130 Identities=16% Similarity=0.129 Sum_probs=86.1
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccccCCCCCCCccccccccCccccccCCC
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHR 596 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~~~ 596 (667)
.|||+|||.|.++.+|.+. - +|+-+|-. ..+.. ...+--+..|..++++. .+||+|-++..|.......
T Consensus 26 ~vLD~GcG~G~~~~~l~~~--~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKR--N----TVVSTDLNIRALES--HRGGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEEEETCTTCHHHHHHTTT--S----EEEEEESCHHHHHT--CSSSCEEECSTTTTBCG--GGCSEEEECCCCBTTCCCT
T ss_pred eEEEeccCccHHHHHHHhc--C----cEEEEECCHHHHhc--ccCCeEEECChhhhccc--CCCCEEEECCCCccCCccc
Confidence 7999999999999999863 2 66666654 33333 33333344555555553 8999999987776433100
Q ss_pred ---CCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCeeEEeeeccCCCccEEEEE
Q 005959 597 ---HRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIEIESNSDERLLICQ 658 (667)
Q Consensus 597 ---~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~~ 658 (667)
.......++-++=|.| |||.+++.. .....+++.++++...|+.........+.+++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 1112235666666777 999999965 335577888888899999877765555566666554
No 310
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.91 E-value=3.3e-06 Score=85.61 Aligned_cols=96 Identities=15% Similarity=0.250 Sum_probs=64.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc--ccc-ccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGV-LHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl--ig~-~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+..... .|+-+|-. ..+..+-++ |+ +-+ ..|.. .++.-+.+||+|++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESC
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEech
Confidence 589999999999999998741122 33444443 444444333 33 111 22322 23333489999999998
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+.... +...+|-++-|+|+|||++++.+
T Consensus 115 l~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHLQ------SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcC------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88765 23478999999999999999964
No 311
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.90 E-value=7.9e-06 Score=77.07 Aligned_cols=113 Identities=18% Similarity=0.146 Sum_probs=75.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc----cccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl----ig~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.... -+|+-+|.. ..+..+-+ .|+ --+..|+.+.++.. .+||+|.++.
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 108 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRV-----RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGG 108 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTS-----SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHhc-----CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECC
Confidence 489999999999999998632 245555543 34443333 232 11233444434432 4799999877
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCeeEEe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 644 (667)
.+... ..++-++-|+|+|||.+++.+. .+...++.++++...|++...
T Consensus 109 ~~~~~---------~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 109 SGGEL---------QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp CTTCH---------HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred chHHH---------HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 65433 4689999999999999999753 566778888888777765544
No 312
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.90 E-value=2.3e-06 Score=83.77 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=64.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc-------cccccccccCCCCCCCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-------VGVLHDWCEAFPTYPRTYDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl-------ig~~~~~c~~f~typ~tyDl~H 584 (667)
.+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+ .|+ +-+...=.+.++.-+.+||+|.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY-----SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 4799999999999999997422 44444543 44444433 232 1111111223333348999999
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+..++.... +.-....+|-++-|+|||||.+++.+
T Consensus 107 ~~~~l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVP---DPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCC---CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCC---CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 998888765 33333468999999999999999964
No 313
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.89 E-value=7.8e-06 Score=81.77 Aligned_cols=125 Identities=12% Similarity=0.080 Sum_probs=78.2
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c-----------------------------
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G----------------------------- 561 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G----------------------------- 561 (667)
-.+|||+|||.|.++..|... .. -+|+-+|-. ..+..+-++ +
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~--~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACE--SF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGG--TE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhc--cc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 468999999999999988763 22 345555544 334433221 1
Q ss_pred ---c-cccccccccCCCCCC---CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH----------
Q 005959 562 ---F-VGVLHDWCEAFPTYP---RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------- 624 (667)
Q Consensus 562 ---l-ig~~~~~c~~f~typ---~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------- 624 (667)
+ --+..|..+.-+.-+ .+||+|.+..++..... +.-....+|-|+-|+|+|||++|+.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACP--DLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcC--ChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 1 112233333222123 79999999988874331 1123457899999999999999997511
Q ss_pred ------HHHHHHHHHHhhCCCeeEEeee
Q 005959 625 ------RLIESARALTTRLKWDARVIEI 646 (667)
Q Consensus 625 ------~~~~~~~~~~~~~~W~~~~~~~ 646 (667)
-..+++..++...-+++.....
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 1245777888877787665543
No 314
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.89 E-value=5.2e-06 Score=83.96 Aligned_cols=93 Identities=19% Similarity=0.143 Sum_probs=61.6
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc-ccccccccccCCCCCCCccccccccCcccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-FVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG-lig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
-.+|||+|||.|.++..|.+.+.. |+-+|-. ..+..+-++. +--+..|. +.++.-+.+||+||+..++.++.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~~-----v~gvD~s~~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGLF-----VYAVEPSIVMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHFS 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTCE-----EEEECSCHHHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGCS
T ss_pred CCEEEEEcCcccHHHHHHHhCCCE-----EEEEeCCHHHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhcc
Confidence 358999999999999999874333 3333332 3333333332 21122233 33443348999999999887664
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEE
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
+...+|-|+-|+|| ||++++.
T Consensus 109 ------~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 109 ------HLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp ------SHHHHHHHHHHHBC-SSCEEEE
T ss_pred ------CHHHHHHHHHHHhC-CcEEEEE
Confidence 34578999999999 9988875
No 315
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.89 E-value=3.8e-06 Score=81.65 Aligned_cols=118 Identities=23% Similarity=0.206 Sum_probs=81.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-cccccccccccCCCCCCCccccccccCccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 594 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-Glig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~ 594 (667)
..|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ ++--+..|.. .++ .+.+||+|.|..++....
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~- 116 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF-----DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP- 116 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC-
T ss_pred CcEEEECCCCCHHHHHHHHcCC-----eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC-
Confidence 4799999999999999997422 44555544 555555555 4322333332 234 458999999998887653
Q ss_pred CCCCCCcchhheeccccccCCcEEEEEcCH---------------HHHHHHHHHHhhCC-CeeEEee
Q 005959 595 HRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLK-WDARVIE 645 (667)
Q Consensus 595 ~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------~~~~~~~~~~~~~~-W~~~~~~ 645 (667)
.-....+|-|+-|+|+|||++++.... ...++++.+++.-- ++.....
T Consensus 117 ---~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 117 ---RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp ---HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred ---HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 124457899999999999999986221 24677888888887 8876554
No 316
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.89 E-value=8.6e-06 Score=81.40 Aligned_cols=94 Identities=21% Similarity=0.191 Sum_probs=65.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc----ccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG----lig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++.+|.+.... +|+-+|-. ..+..+-++. +--+..|. +.++.-+.+||+|.|..++..
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAK----KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhh
Confidence 58999999999999999874321 44555543 4555554442 21122232 234433489999999998876
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
.. ....+|-|+-|+|+|||.+++.
T Consensus 121 ~~------~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 121 IA------SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CS------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hh------hHHHHHHHHHHHcCCCcEEEEE
Confidence 64 3567899999999999999996
No 317
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.88 E-value=4.7e-06 Score=84.24 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=76.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc---c-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---G-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli---g-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.+. ... +|+-+|-. ..+..+-++ |+- - +..|+ +.++.-+.+||+|+|.+
T Consensus 48 ~~vLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGH-VTG---QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTT-CSS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESS
T ss_pred CEEEEeCCCCCHHHHHHHhc-cCC---EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcC
Confidence 58999999999999999873 122 33444433 445444433 431 1 23344 33443248999999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-----------H----------HHHHHHHHHhhCCCeeEEe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARVI 644 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~----------~~~~~~~~~~~~~W~~~~~ 644 (667)
++... +...+|-++-|+|+|||++++.+.. . ..+++.++++..-++....
T Consensus 123 ~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 123 AIYNI-------GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp CGGGT-------CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred Cceec-------CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 88654 3467899999999999999997421 1 2346667777777776543
No 318
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.88 E-value=5.5e-06 Score=81.84 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=79.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc----cccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF----VGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl----ig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+++. --+..|.. .++.-+.+||+|.+.+++.+
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY-----KAVGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTS
T ss_pred CeEEEEcCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhh
Confidence 3899999999999999998422 44555544 56666666631 11222222 23322489999999988876
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEcCH----------------------HHHHHHHHHHhhCCCeeEEe
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------RLIESARALTTRLKWDARVI 644 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~~~~~ 644 (667)
.. ....+|-|+-|+|+|||++++.+.. ...++++.+++.--+++...
T Consensus 129 ~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 129 TE------EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SS------CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cc------CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 54 2347899999999999999997410 12356788888888886654
No 319
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.87 E-value=1e-05 Score=82.46 Aligned_cols=92 Identities=15% Similarity=0.209 Sum_probs=63.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc--cccccccccccCCCCCCCccccccccCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R--Glig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++--+..|.. .++ ++.+||+|++..++....
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGA-----EVLGTDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGCS
T ss_pred CEEEEecCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhCc
Confidence 5899999999999999987332 33444433 444444444 2222222332 344 378999999998887653
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEE
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
+...+|-|+-|+|||||++++.
T Consensus 132 ------d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 132 ------EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHhcCCCcEEEEE
Confidence 3457899999999999999986
No 320
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.87 E-value=0.00017 Score=77.62 Aligned_cols=132 Identities=11% Similarity=0.137 Sum_probs=72.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHh----cccccc------cccccccCCCCCCCccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGFVG------VLHDWCEAFPTYPRTYDLVHA 585 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~----~RGlig------~~~~~c~~f~typ~tyDl~H~ 585 (667)
..|||+|||+|.|+.+|....... .|+-+|.. ..+..+- +.|+-. +..|..+.++ +.+||+|-+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--CCCeeEEEE
Confidence 679999999999999998742111 23333433 2332222 233211 2334444444 279999999
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcC--HHHHHHHHHHHhhCCCeeEEeeeccCCCccEEEEEcccc
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--ARLIESARALTTRLKWDARVIEIESNSDERLLICQKPFF 662 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~li~~K~~~ 662 (667)
+..|..... -.+-....++-++-|+|+|||.+++..+ ...-..++++-. ..+.... +.++.|.+-.+-
T Consensus 299 nppfh~~~~-~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg--~~~~~a~------~~~F~V~~~~~~ 368 (375)
T 4dcm_A 299 NPPFHQQHA-LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG--NCTTIAT------NNKFVVLKAVKL 368 (375)
T ss_dssp CCCC--------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--CCEEEEE------CSSEEEEEEECC
T ss_pred CCCcccCcc-cCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC--CEEEEee------CCCEEEEEEcCc
Confidence 888764220 0112223578899999999999998532 223334444333 1222222 356666665543
No 321
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.87 E-value=3.7e-06 Score=84.97 Aligned_cols=95 Identities=24% Similarity=0.282 Sum_probs=64.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc---c-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---G-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli---g-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++..|.+. .. .+|+-+|-. ..+..+-++ |+- - +..|..+ +|.-+.+||+|.+..
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~-~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATA-RD---VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASFDAVWALE 137 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHH-SC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHh-cC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCccEEEEec
Confidence 48999999999999999863 12 244444544 445444433 432 1 2223322 232137999999999
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+|.+.. + ...+|-|+-|+|+|||.+++.+
T Consensus 138 ~l~~~~---~---~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHMP---D---RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTSS---C---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhCC---C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888764 2 3678999999999999999875
No 322
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.87 E-value=1e-05 Score=82.75 Aligned_cols=138 Identities=12% Similarity=0.178 Sum_probs=88.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++.+|... .+- .+|+-+|-. ..+.++-++ |+ -=+..|+.++++ +.+||+|-++--
T Consensus 111 ~~vLDlG~GsG~~~~~la~~-~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASE-RPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHH-CTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CEEEEecCCccHHHHHHHHh-CCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 37999999999999999853 221 145555554 444444332 32 223446666655 478999999754
Q ss_pred cccccC---------CCCC----------CCcchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEEeeeccC
Q 005959 589 LSLESG---------HRHR----------CSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESN 649 (667)
Q Consensus 589 ~~~~~~---------~~~~----------c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~~~~ 649 (667)
+..... .... -.+..++-++-|+|+|||++++.......++++++.+...|+......+..
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~ 265 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYG 265 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTT
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCC
Confidence 432210 0000 122467788999999999999986666667778877777776544433455
Q ss_pred CCccEEEEEc
Q 005959 650 SDERLLICQK 659 (667)
Q Consensus 650 ~~~~~li~~K 659 (667)
+.+++++++|
T Consensus 266 g~~r~~~~~~ 275 (276)
T 2b3t_A 266 DNERVTLGRY 275 (276)
T ss_dssp SSEEEEEEEC
T ss_pred CCCcEEEEEE
Confidence 6788888875
No 323
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.87 E-value=9e-06 Score=80.22 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=63.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cc-cccccccCCCCCCCccccccccC-c
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEG-L 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~c~~f~typ~tyDl~H~~~-~ 588 (667)
.+|||+|||.|.++..|.+ . .+|+-+|-. ..+..+-++ |. +- +..|..+ ++ .+.+||+|.+.. +
T Consensus 35 ~~vLdiG~G~G~~~~~l~~--~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~ 106 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLAD--H----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDS 106 (243)
T ss_dssp CEEEEESCTTCHHHHHHTT--T----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTG
T ss_pred CeEEEecCCCCHHHHHHhh--C----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCc
Confidence 5899999999999999986 3 355555554 445444443 21 11 1223222 22 358999999875 6
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
+.... +.-....+|-++-|+|+|||.+++
T Consensus 107 ~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 107 LNYLQ---TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GGGCC---SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcC---CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 66653 334556789999999999999998
No 324
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.86 E-value=7.6e-06 Score=79.64 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=65.8
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccc---cCCCCCCCccccccccCcccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWC---EAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c---~~f~typ~tyDl~H~~~~~~~ 591 (667)
-.+|||+|||.|.++.+|.+. + .+|+-+|-. ..+..+-++..--+..|.. .+|+ +.+||+|.+..++.+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN--G---TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYE--EEQFDCVIFGDVLEH 105 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT--T---CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSC--TTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHhc--C---CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCC--CCccCEEEECChhhh
Confidence 358999999999999999873 4 345555554 4455555443211222333 3333 289999999998877
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. +...+|-|+-|+|+|||++++..
T Consensus 106 ~~------~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 106 LF------DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp SS------CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred cC------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 64 23578999999999999999963
No 325
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.86 E-value=4.6e-06 Score=85.52 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=63.8
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c--ccccccccccCCCCCCCccccccccCc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--FVGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G--lig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
-.+|||+|||.|.++..|.+.-.+- -.|+-+|-. ..+..+-++ | +-=+..|.. .++ ++.+||+||+..+
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEG--SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICHAF 98 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTT--CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEESC
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEECCh
Confidence 3589999999999999998631110 123333332 333333322 2 111223333 344 3789999999998
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCH
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 624 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 624 (667)
+.... +...+|-|+-|+|+|||++++.+..
T Consensus 99 l~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT------TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS------SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC------CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 87664 3357899999999999999987543
No 326
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.86 E-value=5.3e-06 Score=78.40 Aligned_cols=116 Identities=13% Similarity=0.141 Sum_probs=73.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-----cccccccccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-----VGVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-----ig~~~~~c~~f~typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++ |+ --+..|+.+.++ +.+||+|.++
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~-----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEV-----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGS-----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CeEEEeCCCCCHHHHHHHHcC-----CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 479999999999999998732 244444443 444444333 32 223445555554 5799999997
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-HHHHHHHHHHhhCCCeeEEe
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARVI 644 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-~~~~~~~~~~~~~~W~~~~~ 644 (667)
..|... .-....++-++-|+|+|||.+++.+.. ....++.+..+..-+++...
T Consensus 127 ~~~~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 127 PPIRAG-----KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp CCSTTC-----HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred CCcccc-----hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence 766531 123457899999999999999997543 33444555444443444444
No 327
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.86 E-value=2.6e-06 Score=85.17 Aligned_cols=97 Identities=21% Similarity=0.190 Sum_probs=67.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc-----ccccccccccCCCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----FVGVLHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG-----lig~~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
.+|||+|||.|.++..|.+. .. .+|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|++..++.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~-~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEK-YG---AHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHH-cC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHH
Confidence 58999999999999999873 12 245555544 5565555553 2122334433 232248999999998887
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+.. .-....+|-|+-|+|||||++++.+
T Consensus 132 ~~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 132 ALS----LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC----hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 762 1234578999999999999999974
No 328
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.85 E-value=3.8e-06 Score=85.89 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=66.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc-------cccccccc-C---CCCCCCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV-------GVLHDWCE-A---FPTYPRTY 580 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli-------g~~~~~c~-~---f~typ~ty 580 (667)
.+|||+|||.|.++..|.+. .. +|+-+|-. ..+..+-++ +.- -.-.|+.+ + |+ +.+|
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~--~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~f 131 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE--GF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA--GDGF 131 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC--TTCE
T ss_pred CEEEEecCCCCHHHHHHHHC--CC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc--CCCe
Confidence 57999999999999999984 22 66666765 566655443 110 01122221 1 33 3899
Q ss_pred cccccc-CccccccC-CCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 581 DLVHAE-GLLSLESG-HRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 581 Dl~H~~-~~~~~~~~-~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
|+|+|. .+|.+... ....-....+|-|+-|+|+|||++++...
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 999998 67766540 00123356799999999999999999753
No 329
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.85 E-value=5.6e-06 Score=80.08 Aligned_cols=127 Identities=9% Similarity=0.060 Sum_probs=76.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--ccc-ccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~-~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++.+|... .+- .+|+-+|.. ..+..+-+ .|+ +-+ ..|+.+..+ +.+||+|.+..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~-~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~~~~ 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIV-RPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS--EPPFDGVISRAF 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHH-CTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC--CSCEEEEECSCS
T ss_pred CeEEEECCCCCHHHHHHHHH-CCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc--cCCcCEEEEecc
Confidence 37999999999999998863 121 134444443 33333332 243 222 233333221 378999998542
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEEee---e-ccCCCccEEEEEcc
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIE---I-ESNSDERLLICQKP 660 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~---~-~~~~~~~~li~~K~ 660 (667)
.....++-++-|+|+|||++++......-++++.+.+ .|+..... . +.+....+++++|.
T Consensus 142 ----------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ----------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ----------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ----------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2234789999999999999999865544556666655 67755421 1 12334666777663
No 330
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.84 E-value=2.2e-05 Score=80.37 Aligned_cols=70 Identities=14% Similarity=0.084 Sum_probs=55.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCH-------HHHHHHHHc----CC--CceEEeecccCC-C-CCC--C
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASG-------SQVQLTLER----GL--PAMIGSFASKQL-P-YPS--L 316 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~-------~ml~~A~er----gl--~~~~~~~da~~L-p-fpd--~ 316 (667)
..+|||+|||+|.++..|++.+ ..|+++|.++ .+++.|+++ ++ .+.+..+|+..+ + +++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3789999999999999999875 3589999999 888888653 22 367777887663 3 444 6
Q ss_pred CccEEEeccc
Q 005959 317 SFDMLHCARC 326 (667)
Q Consensus 317 sFDlV~~s~~ 326 (667)
+||+|++...
T Consensus 161 ~fD~V~~dP~ 170 (258)
T 2r6z_A 161 KPDIVYLDPM 170 (258)
T ss_dssp CCSEEEECCC
T ss_pred CccEEEECCC
Confidence 8999999754
No 331
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.83 E-value=1.2e-05 Score=82.83 Aligned_cols=96 Identities=13% Similarity=0.176 Sum_probs=60.1
Q ss_pred eEEEeccccchhhhhh----hhhcCCCeEEEEeecCCCC-CchhhHhcc-----ccccccccc------------ccCCC
Q 005959 517 RNVLDMNAHFGGFNSA----LLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDW------------CEAFP 574 (667)
Q Consensus 517 R~vlDm~~~~g~faa~----l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----Glig~~~~~------------c~~f~ 574 (667)
..|||+|||.|.++.. |......+ ...++-+|.. .-+..+-+| |+-.+--.| ..+|+
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 4799999999987653 33211123 2233445544 445444443 332111111 11233
Q ss_pred CCCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 575 TYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 575 typ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
+.+||+|+|..++.++. +....|-||-|+|+|||++++.
T Consensus 133 --~~~fD~V~~~~~l~~~~------d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 --LQKWDFIHMIQMLYYVK------DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp --CCCEEEEEEESCGGGCS------CHHHHHHHHHHTEEEEEEEEEE
T ss_pred --CCceeEEEEeeeeeecC------CHHHHHHHHHHHcCCCcEEEEE
Confidence 38999999999988775 3457899999999999999985
No 332
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.83 E-value=1.7e-05 Score=76.11 Aligned_cols=138 Identities=9% Similarity=-0.009 Sum_probs=83.7
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---ccc-ccccccCCC-CCCCccccccccC
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGV-LHDWCEAFP-TYPRTYDLVHAEG 587 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~-~~~~c~~f~-typ~tyDl~H~~~ 587 (667)
+|||+|||.|.++.+|.+.-.+- -+|+-+|-. ..+..+-++ |+ +-+ ..|. +.++ ..+.+||+|.++.
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEEEE
T ss_pred EEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEEcC
Confidence 79999999999999988630011 145555554 445444333 33 222 2232 2233 3348999999876
Q ss_pred ccccccCCCCCC------CcchhheeccccccCCcEEEEEc------CHHHHHHHHHHHhhCC---CeeEEeeeccC--C
Q 005959 588 LLSLESGHRHRC------STLDIFTEIDRILRPEGWVIIRD------TARLIESARALTTRLK---WDARVIEIESN--S 650 (667)
Q Consensus 588 ~~~~~~~~~~~c------~~~~~l~E~dRiLRP~G~~i~~d------~~~~~~~~~~~~~~~~---W~~~~~~~~~~--~ 650 (667)
.+-... +.. ....++-++-|+|+|||++++.. ..+..+.+....+.+. |++...+.-+. .
T Consensus 102 ~~~~~~---~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~ 178 (197)
T 3eey_A 102 GYLPSG---DHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANC 178 (197)
T ss_dssp SBCTTS---CTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSC
T ss_pred CcccCc---ccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccC
Confidence 551111 111 12358999999999999999874 2234566666776665 87776655444 2
Q ss_pred CccEEEEEccc
Q 005959 651 DERLLICQKPF 661 (667)
Q Consensus 651 ~~~~li~~K~~ 661 (667)
..-++|.+|.+
T Consensus 179 pp~~~~~~~~~ 189 (197)
T 3eey_A 179 PPILVCIEKIS 189 (197)
T ss_dssp CCEEEEEEECC
T ss_pred CCeEEEEEEcc
Confidence 45677777754
No 333
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.82 E-value=5e-06 Score=83.06 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=64.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------cccccccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GFVGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------Glig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++..|.+.. .+|+-+|-. ..+..+-++ .+--+..|. +.++.-+.+||+|++..++
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARG-----YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTT-----CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCG
T ss_pred CEEEEeCCcCCHHHHHHHHCC-----CEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCch
Confidence 589999999999999998732 244445544 455555444 121223333 3344223799999998888
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
.... +...+|-|+-|+|+|||++++.
T Consensus 115 ~~~~------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC------CHHHHHHHHHHHCCCCcEEEEE
Confidence 7653 3457899999999999999985
No 334
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.82 E-value=2e-05 Score=82.73 Aligned_cols=73 Identities=12% Similarity=0.156 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCceEEee
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSF 306 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~ 306 (667)
....+.+.+.+...++ .+|||+|||+|.++..++++. ....|+++|.++.|++.|+++. .++.+..+
T Consensus 12 pvLl~e~l~~L~~~~g--------~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDE--------KIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHCCCTT--------CEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 4455566666654443 799999999999999999873 2457999999999999998753 23445555
Q ss_pred cccCCC
Q 005959 307 ASKQLP 312 (667)
Q Consensus 307 da~~Lp 312 (667)
++..++
T Consensus 83 d~~~l~ 88 (301)
T 1m6y_A 83 SYREAD 88 (301)
T ss_dssp CGGGHH
T ss_pred CHHHHH
Confidence 554443
No 335
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.81 E-value=3.4e-06 Score=81.70 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=66.7
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccc---cccccccCCCCCCCccccccccCcccccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVG---VLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig---~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-++|+.. +..|..+.++ +.+||+|.+..++.+..
T Consensus 49 ~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGLAD-----RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTP--DRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp EEEEESCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCC--SSCEEEEEEESCGGGSC
T ss_pred eEEEECCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCC--CCceeEEEEechhhcCC
Confidence 899999999999999987432 44445543 5566666666311 2233333333 48999999999888764
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+ -.+..+|-|+-|+|+|||.+++.+
T Consensus 122 ---~-~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 122 ---D-DRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ---H-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---H-HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 1 224578999999999999999874
No 336
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.81 E-value=4.4e-06 Score=85.29 Aligned_cols=94 Identities=16% Similarity=0.174 Sum_probs=65.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cc-cccccccCCC-CCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFP-TYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig-~~~~~c~~f~-typ~tyDl~H~~ 586 (667)
..|||+|||.|.++..|.+.+. .|+-+|-. ..+..+-++ |+ +- +..|.. .++ ..+.+||+|.|.
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH-----QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFH 143 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEEC
Confidence 4799999999999999987422 44444543 445444443 43 11 222333 333 334899999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.++.... +...+|-|+-|+|+|||++++.+
T Consensus 144 ~~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 144 AVLEWVA------DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SCGGGCS------CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhccc------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 9988764 23579999999999999999965
No 337
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.81 E-value=1.3e-05 Score=76.22 Aligned_cols=138 Identities=16% Similarity=0.094 Sum_probs=76.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cccccccccCCCCC-CCcccccccc-C
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPTY-PRTYDLVHAE-G 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~~~~~c~~f~ty-p~tyDl~H~~-~ 587 (667)
..|||+|||.|.++..|.+.. -.|+-+|-. ..+..+-+ .|+ +-+.++-.+.++.+ +.+||+|.++ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~-----~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLS-----KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTS-----SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CEEEEEcCCCCHHHHHHHHhC-----CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 379999999999999998732 234444543 44444433 244 33344434443323 4789999765 2
Q ss_pred ccccccCC--CCCCCcchhheeccccccCCcEEEEEcC------HHHHHHHHHHHhhCC---CeeEEeeeccC--CCccE
Q 005959 588 LLSLESGH--RHRCSTLDIFTEIDRILRPEGWVIIRDT------ARLIESARALTTRLK---WDARVIEIESN--SDERL 654 (667)
Q Consensus 588 ~~~~~~~~--~~~c~~~~~l~E~dRiLRP~G~~i~~d~------~~~~~~~~~~~~~~~---W~~~~~~~~~~--~~~~~ 654 (667)
.+..-... ...-.....|-|+-|+|+|||.+++..- .+..+.+...+..+. |.+.....-+. ....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 178 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFL 178 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEE
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeE
Confidence 22210000 0001122567899999999999998532 234456666666665 66655543332 12344
Q ss_pred EEEEc
Q 005959 655 LICQK 659 (667)
Q Consensus 655 li~~K 659 (667)
++.+|
T Consensus 179 ~~i~~ 183 (185)
T 3mti_A 179 VMLEK 183 (185)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44444
No 338
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.78 E-value=8.9e-06 Score=80.94 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=79.8
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc------cc-cccccccCCCCCCCccccccccC
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF------VG-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl------ig-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
-.+|||+|||.|.++.+|++.. . -+|+-+|-. ..+..+-++.- +- +..|. +.++.-+.+||+|.+..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-F---REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-C---SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHhc-C---CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcc
Confidence 3589999999999999998631 1 134444443 34444333320 11 12232 23343346899999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH---------------HHHHHHHHHHhhCCCeeEEeeec
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLKWDARVIEIE 647 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------~~~~~~~~~~~~~~W~~~~~~~~ 647 (667)
++.... + -.+..+|-|+-|+|+|||++++.+.. ...++++++++..-++.......
T Consensus 155 ~l~~~~---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLT---D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSC---H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCC---H-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 887664 1 12346899999999999999996521 13677888888888887766433
No 339
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.78 E-value=2.1e-05 Score=76.80 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=63.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc--------cccccccccCCCCCCCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--------VGVLHDWCEAFPTYPRTYDLV 583 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl--------ig~~~~~c~~f~typ~tyDl~ 583 (667)
.+|||+|||.|.|+.+|.+.. +. .+|+-+|-. ..+..+-++ |+ -=+..|. +..+.-+.+||+|
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~-~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 106 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDS-FF--EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAA 106 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCT-TC--SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEE
T ss_pred CEEEEeCCCCCHHHHHHHhhC-CC--CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEE
Confidence 589999999999999998732 21 134444443 444444433 22 1111222 1222222689999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 624 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 624 (667)
.|..++.... .-.+..+|-++-|+|+|||.+++.+..
T Consensus 107 ~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 107 TVIEVIEHLD----LSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp EEESCGGGCC----HHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred eeHHHHHcCC----HHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 9999988664 123457889999999999988886543
No 340
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.78 E-value=6e-05 Score=75.84 Aligned_cols=128 Identities=18% Similarity=0.143 Sum_probs=77.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc-cc-----cccccc-cCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VG-----VLHDWC-EAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl-ig-----~~~~~c-~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|+|+..|++. ..- .|+-+|-. +.|..+..+.- +. -+...+ +.++. .-||.+-++-+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~--g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQN--GAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHT--TCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CEEEEEccCCCHHHHHHHhc--CCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 47999999999999999873 211 44555544 66665554321 11 111111 23332 01344444444
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc-------------------CH---HHHHHHHHHHhhCCCeeEEeee
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-------------------TA---RLIESARALTTRLKWDARVIEI 646 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-------------------~~---~~~~~~~~~~~~~~W~~~~~~~ 646 (667)
|+.. ..+|-|+-|+|+|||++++-- .. ..++++..++++.-|++...+.
T Consensus 113 ~~~l---------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 113 FISL---------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp SSCG---------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred hhhH---------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 4333 469999999999999999741 11 2467788888888898776654
Q ss_pred cc-----CCCccEEEEEc
Q 005959 647 ES-----NSDERLLICQK 659 (667)
Q Consensus 647 ~~-----~~~~~~li~~K 659 (667)
.. ++-+-++.++|
T Consensus 184 ~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 184 SPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp CSSCBTTTBCCEEEEEEE
T ss_pred ccCCCCCCCHHHHHHHhh
Confidence 32 23455666666
No 341
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.76 E-value=7.1e-06 Score=81.83 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=59.5
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCC-CCCCccccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFP-TYPRTYDLVHA 585 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~-typ~tyDl~H~ 585 (667)
-.+|||+|||.|.++.+|.+. .+ .-.|+-+|-. ..+..+-+ .|+ |- +..|..+..+ ..+.+||+|.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~-~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASI-SD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTT-CT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHh-CC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 468999999999999999862 12 1234444443 33333322 343 11 2334444444 44589999987
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
+.-.. ....++-++-|+|||||++|+
T Consensus 149 ~~~~~---------~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 149 DAAKA---------QSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ETTSS---------SHHHHHHHHGGGEEEEEEEEE
T ss_pred cCcHH---------HHHHHHHHHHHhcCCCeEEEE
Confidence 54322 344688889999999999999
No 342
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.76 E-value=1.7e-05 Score=80.04 Aligned_cols=96 Identities=26% Similarity=0.304 Sum_probs=64.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc-cccccccccCCCCCCCccccccccCccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 594 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl-ig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~ 594 (667)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++.. .-+..|. +.++.-+.+||+|-+...+.++.
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~- 128 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGF-----EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSYV- 128 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTC-----EEEEEESCHHHHHHHHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHHC-
T ss_pred CeEEEeCCCcCHHHHHHHHcCC-----eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHCCCCCCCEEEEEEcchhhhcc-
Confidence 4799999999999999987322 44555544 55555555542 1111222 22332237999999987665554
Q ss_pred CCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 595 HRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 595 ~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
. +...+|-|+-|+|+|||.+++...
T Consensus 129 --~--~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 129 --E--NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp --S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --c--cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1 266899999999999999998643
No 343
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.76 E-value=1.6e-05 Score=84.89 Aligned_cols=101 Identities=16% Similarity=0.193 Sum_probs=65.4
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----cccc----ccccccccCCCCCCCcccccccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGli----g~~~~~c~~f~typ~tyDl~H~~ 586 (667)
..+.|||+|||.|.++.+|.+. .|-. .++-.|-+..+..+-+ .|+- =+-+|..+.-..+|.+||+|.+.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQY-NKEV--EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHH-STTC--EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHh-CCCC--EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 4689999999999999999873 2211 2333333333433333 2431 22334333210246889999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.++..|.. . ....+|-++-|.|+|||.++|.|
T Consensus 256 ~vlh~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSE--E--EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCH--H--HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCH--H--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 99987752 1 23368899999999999999864
No 344
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.75 E-value=2.2e-05 Score=80.85 Aligned_cols=112 Identities=15% Similarity=0.214 Sum_probs=75.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccccc---cc-cccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG---VL-HDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGlig---~~-~~~c~~f~typ~tyDl~H~~~ 587 (667)
..|||+|||.|+|+.++...... .|+-+|-. ..+..+-+ .|+-. .+ .|. +.++. +.+||+|.++.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~----~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-~~~~~-~~~fD~Vi~~~ 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA----KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMGY 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC----EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEECC
T ss_pred CEEEEecccCCHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-HHhcc-cCCccEEEECC
Confidence 47999999999999999874333 34444543 44443332 24422 22 222 22332 57999998854
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcC-------HHHHHHHHHHHhhCCCeeEEe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-------ARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-------~~~~~~~~~~~~~~~W~~~~~ 644 (667)
.++. ..++-++-|+|+|||++++.+. .+..+++.+.++...|++...
T Consensus 201 p~~~----------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 201 VVRT----------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp CSSG----------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred chhH----------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 4322 3578889999999999999543 356788899999999998874
No 345
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.75 E-value=2.3e-05 Score=80.00 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CceEEeecc
Q 005959 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFAS 308 (667)
Q Consensus 232 ~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da 308 (667)
...+.+.+.+.... ..+|||||||+|.+|. +. ++ ....|+++|.++.|++.++++.. ++.+..+|+
T Consensus 8 ~i~~~iv~~~~~~~--------~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~ 76 (252)
T 1qyr_A 8 FVIDSIVSAINPQK--------GQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHHHCCCT--------TCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG
T ss_pred HHHHHHHHhcCCCC--------cCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECch
Confidence 34455666655433 3789999999999999 65 43 22238999999999999987642 467888898
Q ss_pred cCCCCCCC-----CccEEEeccc
Q 005959 309 KQLPYPSL-----SFDMLHCARC 326 (667)
Q Consensus 309 ~~Lpfpd~-----sFDlV~~s~~ 326 (667)
..+++++. ..|.|+++.-
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECC
T ss_pred hhCCHHHhhcccCCceEEEECCC
Confidence 88876532 3467777743
No 346
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.75 E-value=9.6e-06 Score=78.64 Aligned_cols=92 Identities=22% Similarity=0.196 Sum_probs=62.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc--cccccccccccCCCCCCCccccccccCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R--Glig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
.+|||+|||.|.++..| . .. +|+-+|-. ..+..+-++ ++--+..|. +.++.-+.+||+|.+..++.+..
T Consensus 38 ~~vLdiG~G~G~~~~~l-~--~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL-P--YP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp SEEEEETCTTCHHHHHC-C--CS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS
T ss_pred CeEEEECCCCCHhHHhC-C--CC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC
Confidence 48999999999999888 3 20 34444544 445455444 221122222 22332237999999998887653
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
....+|-|+-|+|+|||.+++.+
T Consensus 110 ------~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 ------DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 34578999999999999999974
No 347
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.74 E-value=2.3e-05 Score=82.16 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=85.2
Q ss_pred CCCceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----cccc----ccccccccCCCCCCCccccc
Q 005959 512 PYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLV 583 (667)
Q Consensus 512 ~~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGli----g~~~~~c~~f~typ~tyDl~ 583 (667)
++....+|+|+|||.|.++.+|++....+- ++-.|-+..+..+-+ .|+- =+-+|..+++| ..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p---~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLS---GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP---AGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---CSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCe---EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC---CCCcEE
Confidence 345678999999999999999987322221 222233333333322 2431 23345545555 489999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH----------------------HHHHHHHHHHhhCCCee
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------RLIESARALTTRLKWDA 641 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~~ 641 (667)
.+..++..+.. -....+|-++=|+|+|||+++|.|.. ...++++++++.--++.
T Consensus 240 ~~~~vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 240 VLSAVLHDWDD----LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp EEESCGGGSCH----HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred EEehhhccCCH----HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 99999988762 12346899999999999999996531 11345666666666765
Q ss_pred EEeeeccCCCccEEEEEc
Q 005959 642 RVIEIESNSDERLLICQK 659 (667)
Q Consensus 642 ~~~~~~~~~~~~~li~~K 659 (667)
...... ++ ..++.++|
T Consensus 316 ~~~~~~-~~-~~vie~r~ 331 (332)
T 3i53_A 316 RAAHPI-SY-VSIVEMTA 331 (332)
T ss_dssp EEEEEC-SS-SEEEEEEE
T ss_pred EEEEEC-CC-cEEEEEee
Confidence 544322 22 55666654
No 348
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.74 E-value=8.8e-06 Score=81.60 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=63.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc----c--ccccccc---ccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----F--VGVLHDW---CEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG----l--ig~~~~~---c~~f~typ~tyDl~H~~ 586 (667)
..|||+|||.|.++.+|.+ ... -+|+-+|-+ ..+..+-++. . .=+..|| ...++. .+||.|..+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~--~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~FD~i~~D 135 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQE--API--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHTT--SCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEEC
T ss_pred CeEEEECCCccHHHHHHHH--hCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc--cCCceEEEe
Confidence 4699999999999999976 322 245555655 6666655433 1 1122344 445554 789999876
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
.+.+.... .+.-....++=|+-|+|||||.|++-
T Consensus 136 ~~~~~~~~-~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEET-WHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGG-TTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccch-hhhcchhhhhhhhhheeCCCCEEEEE
Confidence 66554431 01123446888999999999999974
No 349
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.72 E-value=1.5e-05 Score=78.54 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=63.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc----ccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG----lig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++..|.+.+.. +|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGAS----YVLGLDLSEKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CEEEEEcCcCCHHHHHHHHCCCC----eEEEEcCCHHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 58999999999999999874220 33334433 4444444443 2112233322 3322479999999988776
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. ....+|-++-|+|+|||.+++..
T Consensus 120 ~~------~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE------DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc------hHHHHHHHHHHhcCcCcEEEEEe
Confidence 53 34578999999999999999864
No 350
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.72 E-value=1.9e-05 Score=77.00 Aligned_cols=97 Identities=23% Similarity=0.249 Sum_probs=63.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c--ccccccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--FVGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G--lig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++..|.+.. + +|+-+|-. ..+..+-++ | +--+..|..+ ++.-+.+||+|.+..++
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~-~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYG-F----EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTT-C----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCG
T ss_pred CeEEEEeccCCHHHHHHHHcC-C----EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCch
Confidence 579999999999999998742 2 45555543 444444332 1 2222334333 23223799999998884
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
..+. .-....+|-++-|+|+|||.+++.+.
T Consensus 114 ~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 114 VHFE----PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GGCC----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCC----HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4432 12345789999999999999999754
No 351
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.71 E-value=2e-05 Score=77.88 Aligned_cols=110 Identities=8% Similarity=0.067 Sum_probs=72.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc--ccccccccccCCCCC-CCccccccccCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTY-PRTYDLVHAEGLLSLE 592 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG--lig~~~~~c~~f~ty-p~tyDl~H~~~~~~~~ 592 (667)
..|||+|||.|.++.+|.+.+. .|+-+|-. ..+..+-++. +-=+..|+.+.+|.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA-----RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 4799999999999999987422 45555554 5566665552 222345665655532 4799999985
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEE
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARV 643 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~ 643 (667)
-....+|-|+-|+|||||.++.-......+.+...+..-.++...
T Consensus 119 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 119 ------RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp ------SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEEE
T ss_pred ------CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 123468899999999999999443222334555555555555443
No 352
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.71 E-value=7.1e-06 Score=80.88 Aligned_cols=97 Identities=19% Similarity=0.250 Sum_probs=62.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-----cccccccccccCCCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----Glig~~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
..|||+|||.|.++.+|.+.... .+|+-+|-. ..+..+-++ .+--+..|.. .++ ++.+||+|.+..++.
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPE---ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYS-KYD-FEEKYDMVVSALSIH 120 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTT---CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTT-TCC-CCSCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchh-ccC-CCCCceEEEEeCccc
Confidence 68999999999999999874111 134444443 444444443 1211222322 222 238999999998887
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.... -....+|-|+-|+|+|||++++.+
T Consensus 121 ~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLED----EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCH----HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7641 112248899999999999999975
No 353
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.71 E-value=3.9e-05 Score=74.26 Aligned_cols=115 Identities=17% Similarity=0.078 Sum_probs=76.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc--c-ccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--V-GVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl--i-g~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+..... .|+-+|-. ..+..+-++ |+ + -+..|..+.++. ..+||+|-++..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 117 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGGS 117 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEESCC
T ss_pred CEEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEECCC
Confidence 579999999999999998742111 23444443 444444332 33 1 122344344433 257999988665
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCeeEEe
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
+. .+..++-++-|+|+|||.+++.. ..+..+++..+++...|++...
T Consensus 118 ~~---------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 165 (204)
T 3e05_A 118 GG---------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVA 165 (204)
T ss_dssp TT---------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEE
T ss_pred Cc---------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEE
Confidence 53 34478999999999999999984 4467788888888888865544
No 354
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.71 E-value=1.2e-05 Score=82.79 Aligned_cols=94 Identities=10% Similarity=-0.014 Sum_probs=61.1
Q ss_pred eeEEEeccccchhhhhhhhhcC-CCeEEEEeecCCCC-CchhhHhcc-----cccc----cccccccCCCCCC------C
Q 005959 516 VRNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILDR-----GFVG----VLHDWCEAFPTYP------R 578 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~-~~vwvmnv~p~~~~-~~l~~~~~R-----Glig----~~~~~c~~f~typ------~ 578 (667)
-.+|||+|||.|.++..|.+.- .. -+|+-+|-. ..+..+-++ |... +..|.. .++.-. .
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPF---EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQ 112 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCC---SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCC
Confidence 4689999999999999998410 11 234444443 555555443 2211 122222 222112 6
Q ss_pred ccccccccCccccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 579 TYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 579 tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
+||+|+|..++... ....+|-|+-|+|||||++++
T Consensus 113 ~fD~V~~~~~l~~~-------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-------CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-------CHHHHHHHHHHhcCCCcEEEE
Confidence 89999998877543 456899999999999999998
No 355
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.70 E-value=0.00012 Score=85.28 Aligned_cols=105 Identities=15% Similarity=0.071 Sum_probs=72.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCC-----------------------------------------ceeEEEEecCCHHHHH
Q 005959 254 VRTILDIGCGYGSFGAHLFSKEL-----------------------------------------LTMCIANYEASGSQVQ 292 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~-----------------------------------------~~~sV~gvD~S~~ml~ 292 (667)
...|||.+||+|.++..++..+. ....|+|+|+++.|++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 36899999999999887765310 1146999999999998
Q ss_pred HHHHc----CCC--ceEEeecccCC--CCCCCCccEEEecccc-ccccc--CHHH---HHHHHHhcccCCeEEEEEeCCC
Q 005959 293 LTLER----GLP--AMIGSFASKQL--PYPSLSFDMLHCARCG-VDWDQ--KDGI---LLLEVDRVLKPGGYFVWTSPLT 358 (667)
Q Consensus 293 ~A~er----gl~--~~~~~~da~~L--pfpd~sFDlV~~s~~l-l~~~~--d~~~---~L~Ei~RvLKPGG~Lvis~p~~ 358 (667)
.|+++ |+. +.+.++|+..+ |..+++||+|+++--. ..+.. +... .|.++.+.+.|||.+++.++..
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeCCH
Confidence 88754 554 56788888877 4444589999998431 11111 2223 3455556666899999887644
No 356
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.69 E-value=2.5e-05 Score=77.94 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=63.2
Q ss_pred eEEEeccccchhhhhhhhhc--CCCeEEEEeecCCCC-CchhhHhccc--ccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK--GKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~--~~~vwvmnv~p~~~~-~~l~~~~~RG--lig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.++..|.+. ...| +-+|-. ..+..+-++. +--+..|. +.++ -+.+||+|++..++..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v-----~~~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVI-----TGIDSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSE-----EEEESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEE-----EEEECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhh
Confidence 47999999999999999863 2223 333333 4455554442 11122232 3344 3589999999888876
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. +...+|-|+-|+|+|||++++..
T Consensus 108 ~~------~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 VP------DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ST------THHHHHHHHGGGEEEEEEEEEEE
T ss_pred CC------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 53 34578999999999999999974
No 357
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.69 E-value=2.6e-05 Score=80.72 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=66.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH---cCCCceEEeecccCCCCCCCCccEEEecccccc-
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD- 329 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~e---rgl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~- 329 (667)
..+|||||||+|.++.+++++. ...++.++|++..+...+.. .+.++.....+++-..++.+.+|+|+|-.+ .+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pns 168 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ESS 168 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cCC
Confidence 3689999999999999988652 35678899987653221111 011222222222233456789999999865 44
Q ss_pred ---cccCHH--HHHHHHHhcccCC--eEEEEEeCCC
Q 005959 330 ---WDQKDG--ILLLEVDRVLKPG--GYFVWTSPLT 358 (667)
Q Consensus 330 ---~~~d~~--~~L~Ei~RvLKPG--G~Lvis~p~~ 358 (667)
..+... .+|.-+.++|+|| |.|++-.+.+
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 112211 3566678999999 9999988863
No 358
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.69 E-value=0.00036 Score=72.95 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=75.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----------CCCceEEeecccC-CCCCCCCccEE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GLPAMIGSFASKQ-LPYPSLSFDML 321 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----------gl~~~~~~~da~~-Lpfpd~sFDlV 321 (667)
.+++||-||.|.|..++.+++.. ....|+.+|+++.+++.+++- ...+.+..+|+.. +.-..++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 56899999999999999999873 456799999999999988753 1245566666543 33456789999
Q ss_pred EecccccccccC----HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 322 HCARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 322 ~~s~~ll~~~~d----~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+.-.. -...+. -..+++.+++.|+|||+++.....
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 97632 111111 136899999999999999986543
No 359
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.69 E-value=3.4e-05 Score=76.11 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=64.0
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-C----chhhHhcc-cccccccccccC--CCCCCCccccccccCcc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-N----HLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~----~l~~~~~R-Glig~~~~~c~~--f~typ~tyDl~H~~~~~ 589 (667)
+|||+|||.|.++..|.+.-..- .|+-+|-. . .+..+-.+ ++.-+..|-.++ +..++.+||+|.++-
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~~~---~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~-- 134 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVDEG---IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI-- 134 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTS---EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC--
T ss_pred EEEEECCcCCHHHHHHHHHcCCC---EEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec--
Confidence 79999999999998887521011 23333333 1 11222222 233333444443 122358999999862
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEc---------CHHHH--HHHHHHHhhCCCeeEEe
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD---------TARLI--ESARALTTRLKWDARVI 644 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d---------~~~~~--~~~~~~~~~~~W~~~~~ 644 (667)
. ..-....++-|+-|+|||||.+++.- +.+.+ ++++.+.+. ++..-.
T Consensus 135 ---~---~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~--f~~~~~ 192 (210)
T 1nt2_A 135 ---A---QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD--FKIVKH 192 (210)
T ss_dssp ---C---STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT--SEEEEE
T ss_pred ---c---ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh--cEEeee
Confidence 1 11112245789999999999999851 11222 355566666 665543
No 360
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.68 E-value=0.00011 Score=82.96 Aligned_cols=103 Identities=16% Similarity=0.062 Sum_probs=72.7
Q ss_pred CEEEEeCCCCchHHHHHhhcC------C--------ceeEEEEecCCHHHHHHHHHc----CCCceE--EeecccCCC-C
Q 005959 255 RTILDIGCGYGSFGAHLFSKE------L--------LTMCIANYEASGSQVQLTLER----GLPAMI--GSFASKQLP-Y 313 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g------~--------~~~sV~gvD~S~~ml~~A~er----gl~~~~--~~~da~~Lp-f 313 (667)
.+|||.+||+|.+...+++.- . ....++|+|+++.+++.|+.+ ++...+ .++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 489999999999987765420 0 135799999999999888753 554444 555654443 5
Q ss_pred CCCCccEEEecccccc--ccc--------------------------CHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 314 PSLSFDMLHCARCGVD--WDQ--------------------------KDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 314 pd~sFDlV~~s~~ll~--~~~--------------------------d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
++..||+|+++--... |.. ..-.++..+.+.|+|||++++..|.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 5679999999743221 110 0125899999999999999998874
No 361
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.67 E-value=2.8e-05 Score=77.62 Aligned_cols=132 Identities=15% Similarity=0.164 Sum_probs=79.7
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cccccccccCCCC---CCCccccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPT---YPRTYDLVHA 585 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~~~~~c~~f~t---yp~tyDl~H~ 585 (667)
-.+|||+|||.|.++..|....... .|+-+|-. ..+.++-+ .|+ |-+++.=.+.++. .+.+||+|.+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3589999999999888887321121 34444443 33333322 244 3333322233332 3578999998
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcC---HHHHHHHHHHHhhCCCeeEEeee---ccC-CCccEEEEE
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT---ARLIESARALTTRLKWDARVIEI---ESN-SDERLLICQ 658 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~---~~~~~~~~~~~~~~~W~~~~~~~---~~~-~~~~~li~~ 658 (667)
..+ .....++-++-|+|+|||++++.+. .+.++++.+.++...++...... ... ....+++.+
T Consensus 148 ~~~----------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 148 RAV----------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIR 217 (240)
T ss_dssp ECC----------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred ecc----------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEE
Confidence 552 2345789999999999999998643 45566677777777777644321 111 234566666
Q ss_pred cc
Q 005959 659 KP 660 (667)
Q Consensus 659 K~ 660 (667)
|.
T Consensus 218 k~ 219 (240)
T 1xdz_A 218 KI 219 (240)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 362
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.67 E-value=1.1e-05 Score=83.74 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=63.0
Q ss_pred eeEEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHhc----cccc---c-cccccccCCCCCCCccccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHA 585 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~~----RGli---g-~~~~~c~~f~typ~tyDl~H~ 585 (667)
-.+|||+|||.|.++..|.+. +. .|+-+|-. ..+..+-+ .|+- - +..|.. .++.=+.+||+|.+
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGS-----RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWN 191 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEE
Confidence 357999999999999999873 22 34444443 44444443 3432 1 222332 23321289999999
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
..++... ....+|-|+-|+|+|||++++.+
T Consensus 192 ~~~l~~~-------~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 192 NESTMYV-------DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ESCGGGS-------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhC-------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 8887654 26689999999999999999853
No 363
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.66 E-value=6e-05 Score=79.71 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=80.4
Q ss_pred CCceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchh--hHhccccc----ccccccccCCCCCCCcccccccc
Q 005959 513 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLP--MILDRGFV----GVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 513 ~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~--~~~~RGli----g~~~~~c~~f~typ~tyDl~H~~ 586 (667)
+....+|||+|||.|.++.+|++....+- ++-.|-+..+. .+-+.|+- =+-+|..+++ | +||+|.+.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---p-~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQ---GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREV---P-HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEE---EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCC---C-CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCE---EEEecCHHHhhcccccccCCCCCeEEEecCCCCCC---C-CCcEEEEe
Confidence 34578999999999999999987322221 22222221110 01112321 2234444444 4 89999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-------------------------HHHHHHHHHHhhCCCee
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------------RLIESARALTTRLKWDA 641 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------------------~~~~~~~~~~~~~~W~~ 641 (667)
.++..|.. -....+|-|+-|+|||||.++|.|.. ...++++++++.--++.
T Consensus 255 ~vlh~~~d----~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 255 RILHNWGD----EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp SCGGGSCH----HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred hhccCCCH----HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 99988752 12236899999999999999996521 12355667777767766
Q ss_pred EEeeeccCCCccEEEEE
Q 005959 642 RVIEIESNSDERLLICQ 658 (667)
Q Consensus 642 ~~~~~~~~~~~~~li~~ 658 (667)
..... .++...++.++
T Consensus 331 ~~~~~-~~~~~~vie~~ 346 (348)
T 3lst_A 331 DRVVG-TSSVMSIAVGV 346 (348)
T ss_dssp EEEEE-CSSSCEEEEEE
T ss_pred EEEEE-CCCCcEEEEEE
Confidence 55433 23334444444
No 364
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.65 E-value=1.6e-05 Score=78.09 Aligned_cols=113 Identities=15% Similarity=0.179 Sum_probs=77.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccccccccccccCCCCCCCccccccccCccccccCC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 595 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~~~~ 595 (667)
.+|||+|||.|.++..|.. . +-+|.. ..+..+-++++--+..|. +.++.-+.+||+|.+..++....
T Consensus 49 ~~vLDiG~G~G~~~~~l~~--~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKI--K-------IGVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTC--C-------EEEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS--
T ss_pred CcEEEeCCCCCHHHHHHHH--H-------hccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc--
Confidence 4799999999999999975 3 233333 555566666542222232 22332237999999998887653
Q ss_pred CCCCCcchhheeccccccCCcEEEEEcCH------------------------HHHHHHHHHHhhCCCeeEEee
Q 005959 596 RHRCSTLDIFTEIDRILRPEGWVIIRDTA------------------------RLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------------------~~~~~~~~~~~~~~W~~~~~~ 645 (667)
....+|-++-|+|+|||++++.+.. -..++++++++..-++.....
T Consensus 117 ----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 117 ----DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 2357899999999999999996321 134677788888888765543
No 365
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.65 E-value=1.5e-05 Score=85.79 Aligned_cols=116 Identities=22% Similarity=0.203 Sum_probs=77.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc---------c-c----cc-ccccccc-------CC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---------G-F----VG-VLHDWCE-------AF 573 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R---------G-l----ig-~~~~~c~-------~f 573 (667)
..|||+|||.|.++..|.+.-.+- -.|+-+|-. ..+..+-++ | + +- +..|..+ +|
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 479999999999998887621011 134444544 556555554 4 1 11 2233333 34
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-----------------------HHHHHH
Q 005959 574 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------------------RLIESA 630 (667)
Q Consensus 574 ~typ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------------------~~~~~~ 630 (667)
+ +.+||+|++..++.... + ...+|-|+-|+|||||++++.+-. -..+++
T Consensus 163 ~--~~~fD~V~~~~~l~~~~---d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 163 P--DSSVDIVISNCVCNLST---N---KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp C--TTCEEEEEEESCGGGCS---C---HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred C--CCCEEEEEEccchhcCC---C---HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHH
Confidence 3 37999999999888764 2 457999999999999999997411 113677
Q ss_pred HHHHhhCCCeeE
Q 005959 631 RALTTRLKWDAR 642 (667)
Q Consensus 631 ~~~~~~~~W~~~ 642 (667)
.+++..--++..
T Consensus 235 ~~ll~~aGF~~v 246 (383)
T 4fsd_A 235 RRLVAEAGFRDV 246 (383)
T ss_dssp HHHHHHTTCCCE
T ss_pred HHHHHHCCCceE
Confidence 888888778644
No 366
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.65 E-value=1.4e-05 Score=79.53 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=60.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc------c---cccccccccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG------F---VGVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG------l---ig~~~~~c~~f~typ~tyDl~H~~ 586 (667)
..|||+|||.|.++..|.+ ... -+|+-+|-. ..+..+-++. + .|-..+.-.+|+. .+||+|.++
T Consensus 62 ~~vLDiGcGtG~~~~~l~~--~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~fD~V~~d 135 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQE--API--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHHT--SCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEEC
T ss_pred CeEEEEeccCCHHHHHHHh--cCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCC--CceEEEEEC
Confidence 4799999999999999975 222 145556655 5555554432 1 1222222224543 899999983
Q ss_pred -CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 -GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 -~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
..+ .... .+.-....++-|+-|+|||||.+++-+
T Consensus 136 ~~~~-~~~~-~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 136 TYPL-SEET-WHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCC-BGGG-TTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred Cccc-chhh-hhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 222 1110 011122356899999999999999864
No 367
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.65 E-value=3.9e-05 Score=77.38 Aligned_cols=134 Identities=9% Similarity=0.084 Sum_probs=77.8
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc----ccccccccCCCCCCC--cccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPR--TYDLVH 584 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli----g~~~~~c~~f~typ~--tyDl~H 584 (667)
-++|||+|||.|.++.+|.+.-.+- -.|+-+|-. ..+..+-++ |+- =+..|..+.++..+. +||+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4689999999999999998731000 123344433 444444333 442 123344443444433 899999
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------------HHHHHHHH----HHhhCCCeeEEee-ec
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARA----LTTRLKWDARVIE-IE 647 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~-~~ 647 (667)
++.-... ...++-++-|+|||||++|+.+.. .....+++ +...-+|+..... ..
T Consensus 142 ~d~~~~~---------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g 212 (248)
T 3tfw_A 142 IDADKPN---------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVG 212 (248)
T ss_dssp ECSCGGG---------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECS
T ss_pred ECCchHH---------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCC
Confidence 8653222 235788888999999999985431 22233333 3444567665542 11
Q ss_pred cCCCccEEEEEcc
Q 005959 648 SNSDERLLICQKP 660 (667)
Q Consensus 648 ~~~~~~~li~~K~ 660 (667)
....+++.|++|.
T Consensus 213 ~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 213 TKGWDGFTLAWVN 225 (248)
T ss_dssp TTCSEEEEEEEEC
T ss_pred CCCCCeeEEEEEe
Confidence 1224788888874
No 368
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.64 E-value=1.6e-05 Score=78.01 Aligned_cols=132 Identities=13% Similarity=0.118 Sum_probs=75.3
Q ss_pred eeEEEeccccchhhhhhhhhcCCC-eEEEEeecCCCC-CchhhHhc----ccccc----cccccccCCCCCC----Cccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP----RTYD 581 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~-vwvmnv~p~~~~-~~l~~~~~----RGlig----~~~~~c~~f~typ----~tyD 581 (667)
-.+|||+|||.|.++.+|.+. .+ - ..|+-+|-. ..+..+-+ .|+-. +..|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~-~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARG-LSSG--GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTT-CCSS--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHh-CCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 358999999999999999873 11 1 134444433 33433322 24421 1223333333222 5699
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------------HHHHHHHH----HHhhCCCeeEEee
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARA----LTTRLKWDARVIE 645 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~ 645 (667)
+|.++.....+ ..++-++-|+|||||++++.+.. .....+++ +...=+|++....
T Consensus 136 ~v~~d~~~~~~---------~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p 206 (223)
T 3duw_A 136 FIFIDADKQNN---------PAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQ 206 (223)
T ss_dssp EEEECSCGGGH---------HHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEEEcCCcHHH---------HHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 99986554333 36788889999999999985321 12233333 3334456666554
Q ss_pred e-ccCCCccEEEEEc
Q 005959 646 I-ESNSDERLLICQK 659 (667)
Q Consensus 646 ~-~~~~~~~~li~~K 659 (667)
. ...+.+++.|+.|
T Consensus 207 ~~~~~~~dG~~~~~~ 221 (223)
T 3duw_A 207 TVGSKGYDGFIMAVV 221 (223)
T ss_dssp EEETTEEEEEEEEEE
T ss_pred ccCCCCCCeeEEEEE
Confidence 3 1222467777765
No 369
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.64 E-value=3.3e-05 Score=74.22 Aligned_cols=132 Identities=12% Similarity=0.197 Sum_probs=69.8
Q ss_pred eEEEeccccchhhhhhhhhcC----CCeEEEEeecCCCCCchhhHhcccccccccccccC--------------------
Q 005959 517 RNVLDMNAHFGGFNSALLEKG----KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA-------------------- 572 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~----~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~~-------------------- 572 (667)
.+|||+|||.|+++.+|.+.- ..|..+-+.|..... ++.-+-.|..+.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~--------~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIP--------NVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCT--------TCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCC--------CceEEEccccchhhhhhccccccccccchhhH
Confidence 579999999999999998631 234544444421111 111111222221
Q ss_pred ------CCCCCCccccccccCccccccC--CCCC---CCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCe
Q 005959 573 ------FPTYPRTYDLVHAEGLLSLESG--HRHR---CSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWD 640 (667)
Q Consensus 573 ------f~typ~tyDl~H~~~~~~~~~~--~~~~---c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~ 640 (667)
|+ +.+||+|.++..+..... .... -....+|-++-|+|+|||.+++..- .+...++....... |.
T Consensus 96 ~~~~~~~~--~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~ 172 (201)
T 2plw_A 96 YKLKEILQ--DKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQ 172 (201)
T ss_dssp HHHHHHHT--TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EE
T ss_pred HHHHhhcC--CCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 22 268999999765432100 0000 0011367889999999999998521 12233344444443 43
Q ss_pred -eEEeeecc---CCCccEEEEEc
Q 005959 641 -ARVIEIES---NSDERLLICQK 659 (667)
Q Consensus 641 -~~~~~~~~---~~~~~~li~~K 659 (667)
+....... .+.|..+||++
T Consensus 173 ~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 173 LVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEEECCCC-----CCEEEEEEEE
T ss_pred eEEEECCcccCCcCceEEEEEec
Confidence 33332222 23578888876
No 370
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.64 E-value=6.5e-05 Score=69.33 Aligned_cols=129 Identities=11% Similarity=0.147 Sum_probs=72.4
Q ss_pred eEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHhcccccccccccccC---------CCCCCCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA---------FPTYPRTYDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~~---------f~typ~tyDl~H 584 (667)
.+|||+|||.|.++.+|.+. +..|..+-+.| ...+ ..+--+..|..+. ++ +.+||+|.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~--~~~~D~i~ 93 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDPI-----VGVDFLQGDFRDELVMKALLERVG--DSKVQVVM 93 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCCC-----TTEEEEESCTTSHHHHHHHHHHHT--TCCEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---cccc-----CcEEEEEcccccchhhhhhhccCC--CCceeEEE
Confidence 38999999999999999874 12344444433 1111 1111122233222 33 27899999
Q ss_pred ccCccccccCCCCC--CC------cchhheeccccccCCcEEEEEcCH-HHHHHHHHHHhhCCCeeEEeeeccC----CC
Q 005959 585 AEGLLSLESGHRHR--CS------TLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARVIEIESN----SD 651 (667)
Q Consensus 585 ~~~~~~~~~~~~~~--c~------~~~~l~E~dRiLRP~G~~i~~d~~-~~~~~~~~~~~~~~W~~~~~~~~~~----~~ 651 (667)
++..+.... .. -. ...+|-++-|+|+|||.+++.... .....+...... .|+......... +.
T Consensus 94 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 169 (180)
T 1ej0_A 94 SDMAPNMSG---TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSR 169 (180)
T ss_dssp ECCCCCCCS---CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCC
T ss_pred ECCCccccC---CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCc
Confidence 987765332 10 00 146888999999999999996321 223333333333 366444322221 24
Q ss_pred ccEEEEEc
Q 005959 652 ERLLICQK 659 (667)
Q Consensus 652 ~~~li~~K 659 (667)
+..+|+++
T Consensus 170 ~~~~~~~~ 177 (180)
T 1ej0_A 170 EVYIVATG 177 (180)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEcc
Confidence 66777765
No 371
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.63 E-value=5e-05 Score=87.48 Aligned_cols=99 Identities=19% Similarity=0.120 Sum_probs=67.9
Q ss_pred CCEEEEeCCCCchHHHHHhhc----C--------CceeEEEEecCCHHHHHHHHH---cC--CCceEEeecccCCCCC--
Q 005959 254 VRTILDIGCGYGSFGAHLFSK----E--------LLTMCIANYEASGSQVQLTLE---RG--LPAMIGSFASKQLPYP-- 314 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~----g--------~~~~sV~gvD~S~~ml~~A~e---rg--l~~~~~~~da~~Lpfp-- 314 (667)
...|||||||+|.+....+.. + .....|+++|.++..+...+. .+ -.+.++.++++.+..|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 357999999999996432211 1 124589999999866543332 23 2467888899888774
Q ss_pred ---CCCccEEEecccccccc-cCHHHHHHHHHhcccCCeEEE
Q 005959 315 ---SLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFV 352 (667)
Q Consensus 315 ---d~sFDlV~~s~~ll~~~-~d~~~~L~Ei~RvLKPGG~Lv 352 (667)
.+..|+|+|.....-.. +-....|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57899999985422111 222468888899999999876
No 372
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.60 E-value=6.5e-05 Score=73.47 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=75.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cc-cccccccCCCC-C-CCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPT-Y-PRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~c~~f~t-y-p~tyDl~H~~ 586 (667)
..|||+|||.|.|+.+|... .|- .+|+-+|-. ..+..+.+ .|+ +- +..|..+ ++. + +.+||+|.++
T Consensus 43 ~~vLDiGcG~G~~~~~la~~-~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQ-NPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHH-CTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHH-CCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 46999999999999998863 211 245555544 44444433 233 11 2233333 331 2 3789999986
Q ss_pred CccccccC---CCCCCCcchhheeccccccCCcEEEEE-cCHHHHHHHHHHHhhCCCeeEEe
Q 005959 587 GLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 587 ~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
... .|.. ...+-....+|-++-|+|+|||.+++. |..+..+.+.++.....|+....
T Consensus 119 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 432 1210 001112346899999999999999997 45566777777777767776554
No 373
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.59 E-value=3.1e-05 Score=74.49 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=72.0
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cccc-cccccCCCCCCCccccccccCccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig~~-~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
+|||+|||.|.++.+|.+. .. +|+-+|-. ..+..+-++ |+ +-++ .|. +.++.-+.+||+|.+. +.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CC
T ss_pred CEEEECCCCCHhHHHHHhC--CC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hh
Confidence 8999999999999999873 22 56666654 455554444 32 1111 222 2233223799999984 32
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEcC-----------------HHHHHHHHHHHhhCCCeeEEe
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----------------ARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----------------~~~~~~~~~~~~~~~W~~~~~ 644 (667)
++ ..-....+|-++-|+|+|||++++.+. .-..++++++++ .|++...
T Consensus 104 ~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 104 HL----PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CC----CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred cC----CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 22 112355789999999999999999631 122467777777 6776654
No 374
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.59 E-value=9.1e-06 Score=83.73 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=61.7
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c------ccccccccccCCCCCCCcccccccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G------FVGVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G------lig~~~~~c~~f~typ~tyDl~H~~ 586 (667)
.|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ | +-=+..|.. .++. +.+||+|.|+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW-----EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFAL-DKRFGTVVIS 157 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC-----CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCCC-SCCEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCCc-CCCcCEEEEC
Confidence 799999999999999997432 34444543 445444433 2 111223333 2443 7899999875
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
...-.+. ..-....+|-|+-|+|||||.+++..
T Consensus 158 ~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 158 SGSINEL---DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHHHTTS---CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccC---CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3322222 22335678999999999999999963
No 375
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.57 E-value=1.6e-05 Score=81.48 Aligned_cols=99 Identities=9% Similarity=0.085 Sum_probs=60.2
Q ss_pred EEEeccccchhhhhhhhhcC-CCeEEEEeecCCCC-CchhhHhcc----cccccccccccCCCCCC-CccccccccCccc
Q 005959 518 NVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYP-RTYDLVHAEGLLS 590 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~-~~vwvmnv~p~~~~-~~l~~~~~R----Glig~~~~~c~~f~typ-~tyDl~H~~~~~~ 590 (667)
+|||+|||.|.++.+|.+.- .+= .+|+-+|-. .-|..+-+| |+..-+.-.|.-+..+| ..||+|-+..++.
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~--~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDN--CKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSS--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCC--CEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 69999999999998887521 010 134444543 445444332 43222211222222223 4699999987766
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
... .-....+|-||-|+|+|||.+|+.|
T Consensus 151 ~~~----~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 151 FLE----PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecC----chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 543 1122358899999999999999975
No 376
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.56 E-value=5.9e-05 Score=80.04 Aligned_cols=136 Identities=19% Similarity=0.169 Sum_probs=84.1
Q ss_pred CceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----ccc----cccccccccCCCCCCCccccccc
Q 005959 514 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHA 585 (667)
Q Consensus 514 ~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGl----ig~~~~~c~~f~typ~tyDl~H~ 585 (667)
..-.+|||+|||.|.++.+|.+....+ .++-.|-+..+..+-+ .|+ -=+-+|..+++ |..||+|.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPL---PVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---CCCCCEEEE
Confidence 345789999999999999998742122 2222232223332222 233 22334554544 445999999
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcC--H--H-----------------------HHHHHHHHHhhCC
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--A--R-----------------------LIESARALTTRLK 638 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--~--~-----------------------~~~~~~~~~~~~~ 638 (667)
..++..+.. . ....+|-++-|+|+|||+++|.|. . + ..++++++++.--
T Consensus 255 ~~vl~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 330 (374)
T 1qzz_A 255 SFVLLNWSD--E--DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAG 330 (374)
T ss_dssp ESCGGGSCH--H--HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTT
T ss_pred eccccCCCH--H--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 999887752 1 123689999999999999998765 2 1 2345666777777
Q ss_pred CeeEEeeeccCCCc-----cEEEEEcc
Q 005959 639 WDARVIEIESNSDE-----RLLICQKP 660 (667)
Q Consensus 639 W~~~~~~~~~~~~~-----~~li~~K~ 660 (667)
++......- ++.. .++.++|+
T Consensus 331 f~~~~~~~~-~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 331 LALASERTS-GSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEEEEEE-CCSSCSSCEEEEEEEEC
T ss_pred CceEEEEEC-CCCcccCCcEEEEEEEC
Confidence 775544322 2233 67888775
No 377
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.55 E-value=6.5e-05 Score=70.25 Aligned_cols=110 Identities=8% Similarity=0.058 Sum_probs=76.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ |+ --+..|+.++++. .+||+|.++.+
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~ 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCK-----FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSS-----EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC
T ss_pred CEEEEeCCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc
Confidence 4899999999999999986222 33444433 334333332 32 2233455555554 68999999776
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCeeEEee
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 645 (667)
..+..++-++-|+ |||.+++.+ ..+...++.+.++...|++...+
T Consensus 110 ----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 110 ----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp ----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEEE
Confidence 2344788888888 999999986 66778888888888889887764
No 378
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.54 E-value=0.00046 Score=77.94 Aligned_cols=123 Identities=20% Similarity=0.148 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcC--CceeEEEEecCCHHHHHHHHH----cCC---Cc
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLTLE----RGL---PA 301 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g--~~~~sV~gvD~S~~ml~~A~e----rgl---~~ 301 (667)
....+.+.+++..... +....+|||.+||+|.+...+++.- .....++|+|+++.+++.|+. +|+ ..
T Consensus 203 ~~Vv~lmv~ll~~~~~----~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~ 278 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGRE----DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQ 278 (542)
T ss_dssp HHHHHHHHHHHHTTCT----TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHhcccC----CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCcc
Confidence 3344555555542110 1245799999999999987776651 124679999999999988875 355 23
Q ss_pred eEEeecccCC--C-CCCCCccEEEecccc-cccc------c--------------C-HHHHHHHHHhccc-CCeEEEEEe
Q 005959 302 MIGSFASKQL--P-YPSLSFDMLHCARCG-VDWD------Q--------------K-DGILLLEVDRVLK-PGGYFVWTS 355 (667)
Q Consensus 302 ~~~~~da~~L--p-fpd~sFDlV~~s~~l-l~~~------~--------------d-~~~~L~Ei~RvLK-PGG~Lvis~ 355 (667)
.+.++|+... | ++...||+|+++--. ..|. . + .-.++..+.+.|+ |||++++..
T Consensus 279 ~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 279 FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred ceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 5677776655 4 456789999997321 1110 0 0 1248999999999 999999988
Q ss_pred CC
Q 005959 356 PL 357 (667)
Q Consensus 356 p~ 357 (667)
|.
T Consensus 359 P~ 360 (542)
T 3lkd_A 359 PH 360 (542)
T ss_dssp ET
T ss_pred cc
Confidence 74
No 379
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.54 E-value=2e-05 Score=81.81 Aligned_cols=101 Identities=15% Similarity=0.052 Sum_probs=63.6
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc--------------cccccccccc-----CCCC
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--------------FVGVLHDWCE-----AFPT 575 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG--------------lig~~~~~c~-----~f~t 575 (667)
-.+|||+|||.|.++..|.+ .+. -+|+-+|-. ..+..+-+|- +--+..|..+ +|+.
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~--~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK--GRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH--TTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCEEEEECCCCcHHHHHHHh--cCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 35799999999999999986 222 144555544 4444444331 1112222221 2332
Q ss_pred CCCccccccccCccccc-cCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 576 YPRTYDLVHAEGLLSLE-SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 576 yp~tyDl~H~~~~~~~~-~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
-+.+||+|.+..++... . +.-....+|-|+-|+|+|||++++...
T Consensus 111 ~~~~fD~V~~~~~l~~~~~---~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFE---SYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TTCCEEEEEEETCGGGGGG---SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccC---CHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 23589999998877543 2 223345789999999999999999743
No 380
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.53 E-value=2.1e-05 Score=80.07 Aligned_cols=100 Identities=18% Similarity=0.067 Sum_probs=63.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cccc-cccccCCCC-CCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFPT-YPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig~~-~~~c~~f~t-yp~tyDl~H~~ 586 (667)
.+|||+|||.|.++..|...+. -+|+-+|-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.+.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI----GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQ 140 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC----SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEEC
Confidence 4799999999999999876321 134444443 444433333 32 2222 23222 222 25799999998
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
.++..... +.-....+|-|+-|+|+|||++++...
T Consensus 141 ~~l~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 141 FSFHYAFS--TSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp SCGGGGGS--SHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhhhhcC--CHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 88754110 223455789999999999999998753
No 381
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.52 E-value=3.3e-05 Score=79.12 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=55.0
Q ss_pred CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC----------------HHHHHHHHHHHhhCCCee
Q 005959 578 RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----------------ARLIESARALTTRLKWDA 641 (667)
Q Consensus 578 ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----------------~~~~~~~~~~~~~~~W~~ 641 (667)
.+||+|-+..+|..... +--....+|-|+-|+|||||++++.+. .-..+++++++..--++.
T Consensus 173 ~~fD~V~~~~~l~~~~~--~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 173 LPADALVSAFCLEAVSP--DLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp SSEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEEEehhhhhhhcC--CHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 67999999998876431 112456799999999999999998521 113567777777777765
Q ss_pred EEeeecc----------CCCccEEEEEcccccc
Q 005959 642 RVIEIES----------NSDERLLICQKPFFKR 664 (667)
Q Consensus 642 ~~~~~~~----------~~~~~~li~~K~~~~~ 664 (667)
....... ..+.-+.|++|+=|..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (289)
T 2g72_A 251 RDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGLE 283 (289)
T ss_dssp EEEEEEECCGGGCCTTBCCCEEEEEEEEECC--
T ss_pred EEeeEeeccccccccccCcceEEEEEEeccccc
Confidence 5443221 1123456677766553
No 382
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.52 E-value=2e-05 Score=76.84 Aligned_cols=93 Identities=13% Similarity=0.085 Sum_probs=57.1
Q ss_pred eEEEeccccchhhhhhhhhcCC-CeEEEEeecCCCC-CchhhHhc----cccc---cc-ccccccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFV---GV-LHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~-~vwvmnv~p~~~~-~~l~~~~~----RGli---g~-~~~~c~~f~typ~tyDl~H~~ 586 (667)
++|||+|||.|.++.+|.+.-. .. .|+-+|-. ..+..+-+ .|+- -+ ..|..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 5899999999999999986311 11 23333332 33333222 2431 12 2234443455557 9999875
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.- ......++-++-|+|+|||.+++.+
T Consensus 134 ~~---------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD---------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT---------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC---------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 22 2334578888999999999999854
No 383
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.51 E-value=0.00013 Score=71.82 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=73.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cc-cccccccCCCC-C-CCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPT-Y-PRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~c~~f~t-y-p~tyDl~H~~ 586 (667)
..|||+|||.|.|+.+|... .|- .+|+-+|-. ..+..+.+ .|+ +- +..|..+ ++. + +.+||.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~-~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQ-NPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHH-CTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred ceEEEEecCCCHHHHHHHHH-CCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 36999999999999999863 121 245555554 44444433 354 11 2233332 221 2 3789998763
Q ss_pred CccccccC---CCCCCCcchhheeccccccCCcEEEEE-cCHHHHHHHHHHHhhCCCeeEE
Q 005959 587 GLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARV 643 (667)
Q Consensus 587 ~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~ 643 (667)
.. ..|.. ...|-....+|-|+-|+|+|||.+++. |.....+.+.++.....|+...
T Consensus 116 ~~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 116 FS-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp SC-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CC-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 22 11210 002222457899999999999999986 5666666766666665665443
No 384
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.51 E-value=0.00078 Score=72.47 Aligned_cols=92 Identities=11% Similarity=0.057 Sum_probs=63.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCCCCccEEEeccccccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~~~~ 332 (667)
++++|||+||.+|.+|..+++++ ..|+++|..+ |-.... ....+.+...|+.....+.+.||+|+|-.+ .
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~ 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MAQSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMV-----E 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCS-----S
T ss_pred CCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cChhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCC-----C
Confidence 46899999999999999999996 4589999763 222222 223567778888887777788999999754 3
Q ss_pred CHHHHHHHHHhcccCC---eEEEEE
Q 005959 333 KDGILLLEVDRVLKPG---GYFVWT 354 (667)
Q Consensus 333 d~~~~L~Ei~RvLKPG---G~Lvis 354 (667)
++...+.-+.+.|..| +.++..
T Consensus 281 ~p~~~~~l~~~wl~~~~~~~aI~~l 305 (375)
T 4auk_A 281 KPAKVAALMAQWLVNGWCRETIFNL 305 (375)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEE
T ss_pred ChHHhHHHHHHHHhccccceEEEEE
Confidence 3445555555555444 544433
No 385
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.51 E-value=2.9e-05 Score=74.90 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=59.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cc-cccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.+++.++.. ... +|+-+|.. ..+..+-++ |. +- +..|.. .++.-+.+||+|.+..++
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~-~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVE-DGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHH-TTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCG
T ss_pred CEEEEECCCCCHHHHHHHHh-CCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChH
Confidence 58999999999985444321 222 44445544 344433332 21 11 122322 233223799999998877
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.++. .-....+|-|+-|+|+|||++++.+
T Consensus 100 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 100 FHMR----KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCC----HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 6552 1235578999999999999999864
No 386
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.50 E-value=6.1e-05 Score=82.25 Aligned_cols=68 Identities=16% Similarity=0.039 Sum_probs=54.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc------CC-CceEEeecccCC-CC-CCCCccEEEec
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GL-PAMIGSFASKQL-PY-PSLSFDMLHCA 324 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er------gl-~~~~~~~da~~L-pf-pd~sFDlV~~s 324 (667)
+.+|||+|||+|..+..|++.+ ..|+++|.++.|++.|+++ ++ ++.+.++|+... +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4799999999999999999874 4699999999999988754 44 466788887663 32 34689999996
No 387
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.50 E-value=4.4e-05 Score=77.02 Aligned_cols=137 Identities=11% Similarity=0.141 Sum_probs=75.7
Q ss_pred eeEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHhccccc---cc-ccccccCCCCC-----CCccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFV---GV-LHDWCEAFPTY-----PRTYDLV 583 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~~RGli---g~-~~~~c~~f~ty-----p~tyDl~ 583 (667)
-++|||+|||.|.++.+|.+. +..|..+-+-|.-....-..+-..|+- -+ ..|-.+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 468999999999999998862 223444444333222111222233442 11 12333333333 4789999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------------HHHHHHHHHHhhC----CCeeEEeeec
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARALTTRL----KWDARVIEIE 647 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~~~~~~----~W~~~~~~~~ 647 (667)
.++.....+ ..++-++-|+|||||++++.|.. ...+.++++.+.+ ++++.+...
T Consensus 141 ~~d~~~~~~---------~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 210 (242)
T 3r3h_A 141 FIDADKTNY---------LNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI- 210 (242)
T ss_dssp EEESCGGGH---------HHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS-
T ss_pred EEcCChHHh---------HHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc-
Confidence 886543333 25677888999999999985321 2223444444433 455544421
Q ss_pred cCCCccEEEEEccccccc
Q 005959 648 SNSDERLLICQKPFFKRQ 665 (667)
Q Consensus 648 ~~~~~~~li~~K~~~~~~ 665 (667)
.++++|++|.-=+||
T Consensus 211 ---~dG~~~~~k~~~~~~ 225 (242)
T 3r3h_A 211 ---ADGMFLVQPIAENLY 225 (242)
T ss_dssp ---SSCEEEEEEC-----
T ss_pred ---cCceEEEEEcCCCcc
Confidence 467888888655554
No 388
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.49 E-value=3.3e-05 Score=80.72 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=62.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc------------cccccccc--c----CC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF------------VGVLHDWC--E----AF 573 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl------------ig~~~~~c--~----~f 573 (667)
..|||+|||.|+....++. .... +|+=+|-. .-|..+-+| |+ ++..+.-+ + +|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~--~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFY--GEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CEEEETTCTTTTTHHHHHH--TTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CeEEEEecCCcHhHHHHHh--cCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 4799999999998777665 2222 45666655 556555554 21 11111111 2 23
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 574 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 574 ~typ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
+ +.+||+|-|..++...- +.-....+|-||-|+|||||+||+...
T Consensus 126 ~--~~~FD~V~~~~~lhy~~---~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 Y--FGKFNIIDWQFAIHYSF---HPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp C--SSCEEEEEEESCGGGTC---STTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--CCCeeEEEECchHHHhC---CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3 37999999877654321 111346899999999999999999754
No 389
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.48 E-value=8.7e-05 Score=79.26 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=85.9
Q ss_pred CCceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHh----cccc----cccccccccCCCCCCCcccccc
Q 005959 513 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF----VGVLHDWCEAFPTYPRTYDLVH 584 (667)
Q Consensus 513 ~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~----~RGl----ig~~~~~c~~f~typ~tyDl~H 584 (667)
+....+|+|+|||.|.++.+|++....+ .++-.|-+..+..+- +.|+ -=+-+|..+++| ..||+|.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p---~~~D~v~ 273 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGL---RGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIP---DGADVYL 273 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC---SSCSEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCC---eEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC---CCceEEE
Confidence 3456899999999999999998742122 122223222333222 2343 223345555554 4799999
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------------------------HHHHHHHHHHhhCCCe
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------------------RLIESARALTTRLKWD 640 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------------------~~~~~~~~~~~~~~W~ 640 (667)
+..++..+.. -....+|-++-|+|+|||+++|.|.. ...++.+++++.--++
T Consensus 274 ~~~vlh~~~d----~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 274 IKHVLHDWDD----DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EESCGGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred hhhhhccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 9999987752 11235899999999999999995421 1145666777777787
Q ss_pred eEEeeeccCCCccEEEEEc
Q 005959 641 ARVIEIESNSDERLLICQK 659 (667)
Q Consensus 641 ~~~~~~~~~~~~~~li~~K 659 (667)
.........+...++.++|
T Consensus 350 ~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 350 VERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEECSSSSEEEEEEEE
T ss_pred EEEEEECCCCCcEEEEEEe
Confidence 6655332334456776765
No 390
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.47 E-value=4.4e-05 Score=76.02 Aligned_cols=95 Identities=21% Similarity=0.231 Sum_probs=60.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cc-cccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ |+ +- +..|..+ ++ .+.+||+|.|....
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERGY-----EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFST 115 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSG
T ss_pred CEEEEeCCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCc
Confidence 5899999999999999987422 45555554 444444332 32 11 2233333 33 35789999875332
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
..+. ..-....+|-++-|+|+|||.+|+.
T Consensus 116 ~~~~---~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 116 IMYF---DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGS---CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2222 2223457889999999999999985
No 391
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.47 E-value=6.3e-05 Score=76.06 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=79.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCCCC-CCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTY-PRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~ty-p~tyDl~H~~ 586 (667)
.+|||+|||.|.++..|.+.. +. +|+-+|-. ..+..+-+ .|+ +- +..|..+..+.+ +.+||+|-++
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~-~~---~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRT-KA---KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTC-CC---EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CEEEEcCCchhHHHHHHHHhc-CC---cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 479999999999999998732 21 45555554 34433322 243 22 223443333323 3799999997
Q ss_pred CccccccC--------------CCCCCCcchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEEe
Q 005959 587 GLLSLESG--------------HRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 587 ~~~~~~~~--------------~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
--|..... ....+.+..++-++-|+|+|||.+++--..+...++...+....|+....
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEEE
Confidence 65533200 00124566899999999999999999777777788888888888876543
No 392
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.46 E-value=4e-05 Score=77.74 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=74.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc-cccc-cccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl-ig~~-~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++.++...+. +|+-+|-. ..+..+-++ |+ +-++ .|+.+.++ +.+||+|.++.++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~-----~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG-----KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CEEEEecCCCcHHHHHHHHhCC-----eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 4799999999999999887322 44555543 444444442 33 2222 23444343 3689999987554
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCeeEEe
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 644 (667)
... ..++-++-|+|+|||++++.+- ....+++.++.+...+++...
T Consensus 195 ~~~---------~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 195 ELH---------AALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HHH---------HHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred HHH---------HHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 432 3688999999999999999753 344677777777777876554
No 393
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.46 E-value=1.8e-05 Score=78.57 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=59.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|+++.+|.+.. ..|+-+|-. ..+..+-+ .|+ +- +..|..+.. -+.+||+|.++.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~ 152 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-----MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSP 152 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-----CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECC
T ss_pred CEEEECccccCHHHHHHHHcC-----CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECC
Confidence 479999999999999999743 234444443 33333322 233 11 223333322 237999999988
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.|..... ....+.|+-|+|+|||++|+..
T Consensus 153 ~~~~~~~------~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 153 PWGGPDY------ATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCSSGGG------GGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcCCcch------hhhHHHHHHhhcCCcceeHHHH
Confidence 8776441 1236789999999999988754
No 394
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.46 E-value=4.4e-05 Score=81.20 Aligned_cols=96 Identities=15% Similarity=0.152 Sum_probs=60.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhh----Hhcccc---cccccccccCCCCCC-CccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~----~~~RGl---ig~~~~~c~~f~typ-~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+. +. -.|+-+|....+.. +-+.|+ |-+++.=.+.++ +| .+||+|.+..+
T Consensus 68 ~~VLDvGcG~G~~~~~la~~--g~--~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKA--GA--RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHT--TC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CEEEEEeccchHHHHHHHHC--CC--CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 57999999999999999874 21 12222333222322 233454 233332223332 34 89999999766
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
..... ..-.+..++-+++|+|+|||.+|.
T Consensus 143 ~~~l~---~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCLF---YESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTBT---BTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccc---CchhHHHHHHHHHHhCCCCCEEcc
Confidence 55443 345566788999999999999974
No 395
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.46 E-value=0.00012 Score=77.49 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=63.1
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhcc----cccc----cccccccCCCCCCCcccccccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~R----Glig----~~~~~c~~f~typ~tyDl~H~~ 586 (667)
...+|||+|||.|.++.+|.+....+ .++-.|-+..+..+-++ |+-+ +-+|..+. .+|. +|+|.+.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v~~~ 263 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPEL---DSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAVLFC 263 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTC---EEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEEEEe
Confidence 45789999999999999998742122 22222333334433332 4422 23444332 1233 4999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.++..+. + -....+|-++-|+|+|||.++|-|
T Consensus 264 ~vlh~~~---d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 264 RILYSAN---E-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SCGGGSC---H-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred chhccCC---H-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9998775 1 224568999999999999998865
No 396
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.46 E-value=2.5e-05 Score=80.70 Aligned_cols=47 Identities=23% Similarity=0.282 Sum_probs=34.2
Q ss_pred CCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 576 YPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 576 yp~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.+.+||+|.|..++...+-......+..+|-++-|+|||||++|+..
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 35899999998887433100012345679999999999999999964
No 397
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.45 E-value=3.4e-05 Score=75.59 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=73.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----cccc---cc-ccccccCCCCCC-----Ccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---GV-LHDWCEAFPTYP-----RTYDL 582 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGli---g~-~~~~c~~f~typ-----~tyDl 582 (667)
.+|||+|||.|.++.+|.+.-.+- -.|+-+|-. ..+..+-+ .|+- -+ ..|..+.++..+ .+||+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 489999999999999998630001 123333433 33333322 2432 11 223334333333 68999
Q ss_pred ccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------------HHHHHHHHHH----hhCCCeeEEeee
Q 005959 583 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARALT----TRLKWDARVIEI 646 (667)
Q Consensus 583 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~~~----~~~~W~~~~~~~ 646 (667)
|.++..... ...++-++=|+|+|||++++.|-. .....++++. ..-+|+......
T Consensus 144 v~~~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 214 (225)
T 3tr6_A 144 IYIDADKAN---------TDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI 214 (225)
T ss_dssp EEECSCGGG---------HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred EEECCCHHH---------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 997553322 335778888999999999986432 1223334333 333466555421
Q ss_pred ccCCCccEEEEEcc
Q 005959 647 ESNSDERLLICQKP 660 (667)
Q Consensus 647 ~~~~~~~~li~~K~ 660 (667)
.+.++|++|.
T Consensus 215 ----~dG~~~~~k~ 224 (225)
T 3tr6_A 215 ----GDGLTLARKK 224 (225)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCccEEEEEC
Confidence 3678888774
No 398
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.45 E-value=2.5e-05 Score=76.88 Aligned_cols=131 Identities=11% Similarity=0.059 Sum_probs=75.3
Q ss_pred eeEEEeccccchhhhhhhhhcC-CCeEEEEeecCCCC-CchhhHhc----ccccc----cccccccCCCCCC-----Ccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP-----RTY 580 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~-~~vwvmnv~p~~~~-~~l~~~~~----RGlig----~~~~~c~~f~typ-----~ty 580 (667)
-++|||+|||.|.++..|.+.- ... .|+-+|-. ..+.++-+ .|+-. +..|..+.++..+ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 4689999999999999998620 111 33444433 33443333 24321 2334444455554 689
Q ss_pred ccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-----HHHHHHHHHHHhhCCCeeEEeee--ccC-CCc
Q 005959 581 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEI--ESN-SDE 652 (667)
Q Consensus 581 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~--~~~-~~~ 652 (667)
|+|.++.....+. ....++-++ |+|||||.+++.|- .+.++.+++ .=.++...... +.. ..+
T Consensus 136 D~V~~d~~~~~~~------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~d 205 (221)
T 3u81_A 136 DMVFLDHWKDRYL------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKVVD 205 (221)
T ss_dssp SEEEECSCGGGHH------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTEEE
T ss_pred EEEEEcCCcccch------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCCCC
Confidence 9999876555443 112355667 99999999998653 344444443 33566555432 111 135
Q ss_pred cEEEEEc
Q 005959 653 RLLICQK 659 (667)
Q Consensus 653 ~~li~~K 659 (667)
.+.|+.+
T Consensus 206 G~~~~~~ 212 (221)
T 3u81_A 206 GLEKAIY 212 (221)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 6766654
No 399
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.45 E-value=7.3e-05 Score=78.16 Aligned_cols=132 Identities=15% Similarity=0.159 Sum_probs=82.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhcc----c----ccccccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----G----FVGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~R----G----lig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|+|+|||.|.++.+|.+. .|-. .++-.|-+..+..+-++ | +--+-+|..++ +|..||+|.+..+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA-EPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH-CTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHH-CCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCCCEEEEchh
Confidence 89999999999999999874 2211 23333333344433322 2 22234555554 4578999999999
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCH-------------H------------HHHHHHHHHhhCCCeeEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------R------------LIESARALTTRLKWDARV 643 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~------------~~~~~~~~~~~~~W~~~~ 643 (667)
+..|.. . ....+|-++-|+|+|||+++|.|.. + ..++++++++.--++...
T Consensus 243 l~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 243 IGDLDE--A--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp GGGCCH--H--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ccCCCH--H--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 987752 2 2247899999999999999987421 0 134556666666666544
Q ss_pred eeeccCCCccEEEEEc
Q 005959 644 IEIESNSDERLLICQK 659 (667)
Q Consensus 644 ~~~~~~~~~~~li~~K 659 (667)
... .++...+++++|
T Consensus 319 ~~~-~~~~~~~i~~~~ 333 (334)
T 2ip2_A 319 IVD-LPMETRMIVAAR 333 (334)
T ss_dssp EEE-ETTTEEEEEEEE
T ss_pred EEE-CCCCCEEEEEEe
Confidence 322 223356777765
No 400
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.45 E-value=0.00015 Score=76.49 Aligned_cols=136 Identities=22% Similarity=0.261 Sum_probs=84.2
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----ccc----cccccccccCCCCCCCcccccccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGl----ig~~~~~c~~f~typ~tyDl~H~~ 586 (667)
.-.+|||+|||.|.++.+|.+....+-+ +-.|-+..+..+-+ .|+ -=+-+|+.+++ |..||+|.+.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSA---TVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---PRKADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SSCEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEE---EEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---CCCccEEEEc
Confidence 3468999999999999999874323322 22232333333332 233 22345555544 4569999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcCH--------H------------------HHHHHHHHHhhCCCe
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------R------------------LIESARALTTRLKWD 640 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------~------------------~~~~~~~~~~~~~W~ 640 (667)
.++..+.. . ....+|-++-|+|+|||++++.|.. . ..++++++++.--++
T Consensus 257 ~vl~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 257 FVLLNWPD--H--DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp SCGGGSCH--H--HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred ccccCCCH--H--HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 99877652 1 1236899999999999999986533 0 134566677777777
Q ss_pred eEEeeeccCC----CccEEEEEcc
Q 005959 641 ARVIEIESNS----DERLLICQKP 660 (667)
Q Consensus 641 ~~~~~~~~~~----~~~~li~~K~ 660 (667)
......-.+. ...+++++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 333 VEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEEeCCCCcccCccEEEEEEeC
Confidence 6544322221 1567777774
No 401
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00013 Score=78.34 Aligned_cols=97 Identities=19% Similarity=0.202 Sum_probs=61.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhh----Hhcccc---cccccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~----~~~RGl---ig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++..|.+.+. . .|+-+|....+.. +-+.|+ |-+++.=.+.++ +|.+||+|.+..+.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~-~---~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA-R---KVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMG 139 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC-S---EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCB
T ss_pred CEEEEeccCcCHHHHHHHhcCC-C---EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChh
Confidence 5799999999999999987422 1 3333333333332 223444 333332233333 35899999996544
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
.... ..-.+..++-+++|+|+|||.+|+.
T Consensus 140 ~~l~---~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFLL---RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTBT---TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hccc---chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3332 2234557889999999999999863
No 402
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.44 E-value=0.00011 Score=75.57 Aligned_cols=90 Identities=16% Similarity=0.055 Sum_probs=59.5
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH-------HHHc----C-C--CceEEeecccC-CCCCCCCcc
Q 005959 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL-------TLER----G-L--PAMIGSFASKQ-LPYPSLSFD 319 (667)
Q Consensus 255 ~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~-------A~er----g-l--~~~~~~~da~~-Lpfpd~sFD 319 (667)
.+|||+|||+|..+..++.++. .|+++|.++.+.+. ++++ + + ++.+..+|+.. ++....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 6899999999999999999864 48999999976433 3221 1 1 35577777655 443234799
Q ss_pred EEEecccccccccCHHHHHHHHHhcccCCe
Q 005959 320 MLHCARCGVDWDQKDGILLLEVDRVLKPGG 349 (667)
Q Consensus 320 lV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG 349 (667)
+|++... ++.. ....++++..++|++.+
T Consensus 167 vV~lDP~-y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPM-FPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCC-CCCC-CC-----HHHHHHHHHS
T ss_pred EEEEcCC-CCCc-ccchHHHHHHHHHHHhh
Confidence 9999866 3432 22356777778887755
No 403
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.43 E-value=0.00045 Score=80.77 Aligned_cols=104 Identities=15% Similarity=0.057 Sum_probs=71.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcC--CceeEEEEecCCHHHHHHH--HHc--------CCCc-eEEeecccCC-CCCCCCcc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLT--LER--------GLPA-MIGSFASKQL-PYPSLSFD 319 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g--~~~~sV~gvD~S~~ml~~A--~er--------gl~~-~~~~~da~~L-pfpd~sFD 319 (667)
..+|||.|||+|.++..++++. .....++|+|+++.+++.| +.. ++.. .+...+.... +...+.||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 4799999999999999988763 1235689999999999888 321 2222 3333333332 23457899
Q ss_pred EEEecccccc-ccc--------------------------C-HHHHHHHHHhcccCCeEEEEEeCC
Q 005959 320 MLHCARCGVD-WDQ--------------------------K-DGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 320 lV~~s~~ll~-~~~--------------------------d-~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+|+++--... +.. + ...++..+.+.|+|||++++..|.
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 9999854211 100 1 124678899999999999999884
No 404
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.43 E-value=8.6e-05 Score=72.22 Aligned_cols=134 Identities=12% Similarity=0.157 Sum_probs=71.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhcccccccccccccCC------CCCC----Ccccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAF------PTYP----RTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~~f------~typ----~tyDl~H~~ 586 (667)
.+|||+|||.|+|+.+|.+.+..|+-+-+.|..... |+--+-.|..+.- ..++ .+||+|-++
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccCHHHHHHHHHHhhcccCCcceEEecC
Confidence 589999999999999998743345555555532211 2222223332210 0011 379999886
Q ss_pred Ccccccc---C--CCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCee-EEeeec---cCCCccEEE
Q 005959 587 GLLSLES---G--HRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDA-RVIEIE---SNSDERLLI 656 (667)
Q Consensus 587 ~~~~~~~---~--~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~-~~~~~~---~~~~~~~li 656 (667)
.-..... . .........+|-++-|+|||||.|++.- .......+....+.. ++. .+.+.. +.+.|-.+|
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~v 177 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIYIM 177 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEEEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEEEE
Confidence 5321100 0 0000112356778889999999999742 112233444444443 443 333322 134688888
Q ss_pred EEc
Q 005959 657 CQK 659 (667)
Q Consensus 657 ~~K 659 (667)
|++
T Consensus 178 ~~~ 180 (191)
T 3dou_A 178 FFG 180 (191)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
No 405
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.43 E-value=3.4e-05 Score=81.30 Aligned_cols=135 Identities=12% Similarity=0.048 Sum_probs=84.8
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----cccc----ccccccccCCCCCCCccccccccC
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGli----g~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+.|||+|||.|.++.+|.+....+-+ +-.|-+..+..+-+ .|+- -+-+|..+.-+..|..||+|.+.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTG---QIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEE---EEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeE---EEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 789999999999999999874212222 22233333333322 2432 233444333212467899999999
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcC--------H-------------------HHHHHHHHHHhhCCCe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------A-------------------RLIESARALTTRLKWD 640 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------~-------------------~~~~~~~~~~~~~~W~ 640 (667)
++..+.. -....+|-++-|+|+|||.++|.|. . ...++++++++.--++
T Consensus 257 vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 257 CLHYFDA----REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp CGGGSCH----HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCE
T ss_pred ccccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCc
Confidence 9988752 1234689999999999999998641 0 0134456666666676
Q ss_pred eEEeeeccCCCccEEEEEcc
Q 005959 641 ARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 641 ~~~~~~~~~~~~~~li~~K~ 660 (667)
..... .+...+++++||
T Consensus 333 ~~~~~---~g~~~l~~a~kp 349 (352)
T 3mcz_A 333 VGERS---IGRYTLLIGQRS 349 (352)
T ss_dssp EEEEE---ETTEEEEEEECC
T ss_pred eeeec---cCceEEEEEecC
Confidence 55431 123678888986
No 406
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.42 E-value=0.00023 Score=69.59 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=71.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----ccc---c-cccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---G-VLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gli---g-~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
..|||+|||.|.++.+|..... .|+-+|-. ..+..+-++ |+- - +..|..+.++.. .+||+|-+..
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~-----~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~ 130 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGG-----RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGG 130 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECS
T ss_pred CEEEEecCCCCHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECC
Confidence 5799999999999999987422 34444443 444443332 432 1 122333323332 3699988644
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCCCeeEEe
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
.+ ... ++-++-|+|||||.+++.. ..+...++.++.+...+++...
T Consensus 131 ~~----------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 131 GG----------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp CC----------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEE
T ss_pred cc----------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEE
Confidence 22 234 8889999999999999975 4567777777777777776554
No 407
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.41 E-value=0.00017 Score=74.06 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=71.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCC--C-CchhhHhcc--ccccc--ccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG--T-NHLPMILDR--GFVGV--LHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~--~-~~l~~~~~R--Glig~--~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
..|||+|||.|+|+..|.+. ..|.-+-+.|.-. + +.+. .-.. ++.-+ -.|-. .++ +.+||+|-|+..+
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~~~-~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~ 150 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVPRI-TESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGE 150 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCCCC-CCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCC
T ss_pred CEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhhhh-hhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCcc
Confidence 58999999999999999874 5677766666311 1 1100 0000 11111 12222 244 5899999997552
Q ss_pred ccccCCC-CCCCcchhheeccccccCCc--EEEEE----cCHHHHHHHHHHHhhCCCeeEEeeec--cCCCccEEEEE
Q 005959 590 SLESGHR-HRCSTLDIFTEIDRILRPEG--WVIIR----DTARLIESARALTTRLKWDARVIEIE--SNSDERLLICQ 658 (667)
Q Consensus 590 ~~~~~~~-~~c~~~~~l~E~dRiLRP~G--~~i~~----d~~~~~~~~~~~~~~~~W~~~~~~~~--~~~~~~~li~~ 658 (667)
..-.... +.-.+ .+|-++.|+|+||| .|++. +..++++.++.+..... .+.+...- +.+.|-.+|+.
T Consensus 151 ~~~~~~~d~~~~l-~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~ 226 (265)
T 2oxt_A 151 SSPKWSVESERTI-KILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSR 226 (265)
T ss_dssp CCSCHHHHHHHHH-HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESS
T ss_pred cCCccchhHHHHH-HHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEec
Confidence 1100000 00011 26778999999999 99985 34434455554444322 33333311 23356666664
No 408
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.41 E-value=0.00045 Score=72.00 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=65.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHH---HcCCCceEEeecccCCCCCCCCccEEEecccccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTL---ERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~---ergl~~~~~~~da~~Lpfpd~sFDlV~~s~~ll~ 329 (667)
+..+||||||++|.++..++++. ...+|.++|+...+..... ..+.++......+.-..+..+.||+|+|..+ .+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-Pn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-ES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-CC
Confidence 45899999999999999999862 3567889998753211000 0011122222222223455678999999754 44
Q ss_pred cccCH-------HHHHHHHHhcccCC-eEEEEEeCCC
Q 005959 330 WDQKD-------GILLLEVDRVLKPG-GYFVWTSPLT 358 (667)
Q Consensus 330 ~~~d~-------~~~L~Ei~RvLKPG-G~Lvis~p~~ 358 (667)
.... ..+|.-+.++|+|| |.|++-.+.+
T Consensus 159 -sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 159 -SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 2111 13566678999999 9999988753
No 409
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.41 E-value=9.8e-05 Score=74.14 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=66.2
Q ss_pred eEEEeccccchhhhhhhhhc------CCCeEEEEeecCCCCCchhhHhcccccccccccccC--CCCCCC-ccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEK------GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA--FPTYPR-TYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~------~~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~~--f~typ~-tyDl~H~~~ 587 (667)
.+|||+|||.|.+++.|.+. +..|..+-+.|.-.. ... -+...+-=+..|..+. ++..+. +||+|+++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~-~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQ-IPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCC-CCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHH-HHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 48999999999999998763 233444443332211 110 0111121123344432 232223 699999754
Q ss_pred ccccccCCCCCCCcchhheeccc-cccCCcEEEEEcCHHH-----HHHHHHHHhhC--CCee
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDR-ILRPEGWVIIRDTARL-----IESARALTTRL--KWDA 641 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dR-iLRP~G~~i~~d~~~~-----~~~~~~~~~~~--~W~~ 641 (667)
. + -....+|-|+-| +|+|||++++.|.... -+.+..+.+.. .+++
T Consensus 161 ~----~-----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 161 A----H-----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp S----C-----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred c----h-----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 3 1 145578999998 9999999999764211 13566666666 4554
No 410
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.40 E-value=4.1e-05 Score=74.79 Aligned_cols=120 Identities=11% Similarity=0.040 Sum_probs=74.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-cc--------------cccccccccCCCCCC---
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF--------------VGVLHDWCEAFPTYP--- 577 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-Gl--------------ig~~~~~c~~f~typ--- 577 (667)
..|||+|||.|.++..|.+.+. .|+-+|-. .-|..+.+| +. ..-+.-.|--+-..|
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~-----~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY-----HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC-----EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC-----eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 3699999999999999987432 45555544 455555544 11 011111222222233
Q ss_pred -CccccccccCccccccCCCCCCCcchhheeccccccCCcEEE-E-EcCH----------HHHHHHHHHHhhCCCeeEEe
Q 005959 578 -RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVI-I-RDTA----------RLIESARALTTRLKWDARVI 644 (667)
Q Consensus 578 -~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i-~-~d~~----------~~~~~~~~~~~~~~W~~~~~ 644 (667)
.+||+|-+..+|.... ......++-||-|+|||||.++ + -+.. -..++++.+... .|++...
T Consensus 99 ~~~fD~v~~~~~l~~l~----~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALP----ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHSEEEEEEESCGGGSC----HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CCCEEEEEECcchhhCC----HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 6899999888876653 1233457889999999999833 2 2210 125677777777 7886655
Q ss_pred ee
Q 005959 645 EI 646 (667)
Q Consensus 645 ~~ 646 (667)
+.
T Consensus 174 ~~ 175 (203)
T 1pjz_A 174 GG 175 (203)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 411
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.39 E-value=0.00012 Score=74.96 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=63.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-------CCc----eeEEEEecCCH---HHHHHH-----------HHc--C-------
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK-------ELL----TMCIANYEASG---SQVQLT-----------LER--G------- 298 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~-------g~~----~~sV~gvD~S~---~ml~~A-----------~er--g------- 298 (667)
...+|||||+|+|..+..+++. +.. ...++++|..+ +++..+ ++. .
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999988776543 221 36788888665 555433 211 0
Q ss_pred ----------CCceEEeecccC-CCCCC----CCccEEEecccccccccC--HHHHHHHHHhcccCCeEEEE
Q 005959 299 ----------LPAMIGSFASKQ-LPYPS----LSFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVW 353 (667)
Q Consensus 299 ----------l~~~~~~~da~~-Lpfpd----~sFDlV~~s~~ll~~~~d--~~~~L~Ei~RvLKPGG~Lvi 353 (667)
.++.+..+|+.. ++.-+ ..||+|+.-...-.-.++ ...+|.++.++|+|||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 123355666554 44322 279999985211111122 25799999999999999885
No 412
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.39 E-value=0.00096 Score=66.05 Aligned_cols=92 Identities=10% Similarity=-0.053 Sum_probs=64.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC----CceEEeecccC---------------
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQ--------------- 310 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl----~~~~~~~da~~--------------- 310 (667)
.++||||||| ..|..|++. . ...|+.+|.++...+.|++. ++ ++.+..+++..
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4799999985 677778774 1 46799999999998887642 44 34556566432
Q ss_pred CC--------C-CCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEe
Q 005959 311 LP--------Y-PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (667)
Q Consensus 311 Lp--------f-pd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~ 355 (667)
++ . ..++||+|+.-.- .....+..+.+.|+|||++++..
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEeC
Confidence 22 2 2368999997642 22356666779999999997754
No 413
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.38 E-value=4e-05 Score=77.76 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=45.6
Q ss_pred CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH----------------HHHHHHHHHHhhCCCee
Q 005959 578 RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDA 641 (667)
Q Consensus 578 ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~ 641 (667)
.+||+|-|+.++..... +.-.+..+|-+|-|+|+|||+||+++.. -..+++++++..--.++
T Consensus 155 ~~fD~V~~~~~l~~i~~--~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 155 PLADCVLTLLAMECACC--SLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEeeehHHHHHhcC--CHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 58999999999876431 2234457899999999999999998411 13456777666665655
Q ss_pred EEe
Q 005959 642 RVI 644 (667)
Q Consensus 642 ~~~ 644 (667)
...
T Consensus 233 ~~~ 235 (263)
T 2a14_A 233 EQL 235 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 414
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.37 E-value=3.5e-05 Score=76.54 Aligned_cols=97 Identities=9% Similarity=-0.081 Sum_probs=62.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhccc----ccccccccccC-CC-CCC--CccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEA-FP-TYP--RTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RG----lig~~~~~c~~-f~-typ--~tyDl~H~~~ 587 (667)
..|||+|||.|.++..|.+... +|+-+|-. ..+..+-++- +--+..|..+. ++ .++ ..||+|.+..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP-----RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS-----CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CeEEEEcCCCCHHHHHHHHhCC-----CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 4699999999999999987433 45555544 4454444432 11112222220 00 111 2399999998
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
++.... .-....+|-|+-|+|+|||++++.+
T Consensus 133 ~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIP----VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSC----GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCC----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 887664 2345679999999999999988764
No 415
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.37 E-value=7e-05 Score=76.24 Aligned_cols=120 Identities=14% Similarity=0.064 Sum_probs=75.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-cc-------------------cccccccccCCCC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF-------------------VGVLHDWCEAFPT 575 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-Gl-------------------ig~~~~~c~~f~t 575 (667)
..|||+|||.|.++..|.+.+. +|+-+|-. .-+..+.++ ++ -.-+.-.|--+..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~-----~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH-----TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC-----EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CeEEEeCCCCcHHHHHHHHCCC-----eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 3699999999999999998432 45666654 445444332 11 0011111222222
Q ss_pred CC----CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc----C--------HHHHHHHHHHHhhCCC
Q 005959 576 YP----RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD----T--------ARLIESARALTTRLKW 639 (667)
Q Consensus 576 yp----~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d----~--------~~~~~~~~~~~~~~~W 639 (667)
.| .+||+|-+..+|.... ......++-||-|+|||||.+++-. . .-.-++++.+... .|
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~----~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f 219 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAIN----PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KC 219 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSC----GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TE
T ss_pred CCcccCCCEEEEEEhhhhhhCC----HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-Ce
Confidence 22 6899999988887654 2334568899999999999996421 0 0124677777776 48
Q ss_pred eeEEeee
Q 005959 640 DARVIEI 646 (667)
Q Consensus 640 ~~~~~~~ 646 (667)
++...+.
T Consensus 220 ~v~~~~~ 226 (252)
T 2gb4_A 220 SMQCLEE 226 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8766543
No 416
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.37 E-value=0.00016 Score=75.36 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=83.5
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----ccccc----cccccccCCCCCCCcccccccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGlig----~~~~~c~~f~typ~tyDl~H~~ 586 (667)
.-.+|||+|||.|.++.+|.+. .|-. .++-.|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+.
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~ 239 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQH-NPNA--EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLP 239 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHH-CTTC--EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHH-CCCC--eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEc
Confidence 3468999999999999999873 2211 3333333322332322 23322 23343331 245569999999
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcCH---------------------------HHHHHHHHHHhhCCC
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------------------RLIESARALTTRLKW 639 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------------------~~~~~~~~~~~~~~W 639 (667)
.++..+.. -....+|-++-|+|+|||++++.|.. ...++++++++.--+
T Consensus 240 ~~l~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf 315 (335)
T 2r3s_A 240 NFLHHFDV----ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGF 315 (335)
T ss_dssp SCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTC
T ss_pred chhccCCH----HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCC
Confidence 99887741 22347899999999999999985421 014566777777777
Q ss_pred eeEEeeeccCCCccEEEEEcc
Q 005959 640 DARVIEIESNSDERLLICQKP 660 (667)
Q Consensus 640 ~~~~~~~~~~~~~~~li~~K~ 660 (667)
+...... ......++++++|
T Consensus 316 ~~~~~~~-~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 316 SHSQLHS-LPTTQQQVIVAYK 335 (335)
T ss_dssp SEEEEEC-CTTSSSEEEEEEC
T ss_pred CeeeEEE-CCCCceeEEEecC
Confidence 7555432 2223567777654
No 417
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.35 E-value=9.6e-05 Score=73.91 Aligned_cols=106 Identities=15% Similarity=0.177 Sum_probs=71.3
Q ss_pred eEEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHhcc----ccc----ccccccccCCCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~~R----Gli----g~~~~~c~~f~typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++.+|.+. .... .|+-.|-. ..+..+-++ |+- -+..|..+.|+. .+||+|.++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEEC
Confidence 47999999999999999874 1111 23334443 445444443 542 245677777664 789999872
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc-CHHHHHHHHHHHhhCC
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLK 638 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~ 638 (667)
--....++-++-|+|+|||.+++.. ..+..+++.+.++...
T Consensus 170 -----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1222468999999999999999865 4566677777666665
No 418
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.35 E-value=0.00013 Score=72.44 Aligned_cols=115 Identities=14% Similarity=0.107 Sum_probs=67.9
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHh----cccccc---cccccccC----CCCCCCccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGFVG---VLHDWCEA----FPTYPRTYDLV 583 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~----~RGlig---~~~~~c~~----f~typ~tyDl~ 583 (667)
-..|||+|||.|.++.+|.+..... +|+-+|-. ..+..+. +.|+-. +.+|-.+. |+ +.+||+|
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~--~~~~d~v 109 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP--DNSLRMV 109 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC--TTCEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC--CCChheE
Confidence 3579999999999999998642232 34444544 4444333 335411 12232222 44 4899999
Q ss_pred cccCccccccCCC---CCCCcchhheeccccccCCcEEEEE-cCHHHHHHHHHHHhh
Q 005959 584 HAEGLLSLESGHR---HRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTR 636 (667)
Q Consensus 584 H~~~~~~~~~~~~---~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~ 636 (667)
++... ..|...+ .|-.-..++-|+-|+|+|||++++. |.....+.+.+++..
T Consensus 110 ~~~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 110 QLFFP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp EEESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred EEeCC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 97522 2222100 1111225888999999999999986 555556666665544
No 419
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.30 E-value=0.00022 Score=74.76 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=54.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhH-hc-ccc--cccccccccCCCCCCCccccccccCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI-LD-RGF--VGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 592 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~-~~-RGl--ig~~~~~c~~f~typ~tyDl~H~~~~~~~~ 592 (667)
..|||+|||.|+|+..|.+. ..|.-+-+....++..+..+ .+ .|. +-+... ...+..-+.+||+|.|+..++..
T Consensus 84 ~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccC
Confidence 58999999999999999874 34544433111111111100 01 111 111111 01111113689999998766410
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
....+.-....+|-++-|+|+|||.|++.
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 00000000113678899999999999985
No 420
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.29 E-value=0.00012 Score=74.28 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=80.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cccccccccCCC---CCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFP---TYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~~~~~c~~f~---typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++..|... .+- ..|+-+|.. ..+.++-+ -|+ |-+++.--+.++ .++.+||+|-+.
T Consensus 82 ~~vLDiG~G~G~~~i~la~~-~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPLKIV-RPE--LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CEEEEETCTTTTTHHHHHHH-CTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CEEEEEcCCCCHHHHHHHHH-CCC--CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 57999999999998887652 121 134444543 33433332 354 334444334444 345799999874
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEc---CHHHHHHHHHHHhhCCCeeEEeeec---cCCCc-cEEEEEc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD---TARLIESARALTTRLKWDARVIEIE---SNSDE-RLLICQK 659 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d---~~~~~~~~~~~~~~~~W~~~~~~~~---~~~~~-~~li~~K 659 (667)
.+ ..+..++-++-|+|+|||.+++-. ..+.+.+++..++.+.++......- ....+ .+++.+|
T Consensus 159 a~----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 159 AV----------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp SS----------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred Cc----------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 32 234568888999999999988743 4566777777777788876543221 12233 4555666
Q ss_pred c
Q 005959 660 P 660 (667)
Q Consensus 660 ~ 660 (667)
.
T Consensus 229 ~ 229 (249)
T 3g89_A 229 T 229 (249)
T ss_dssp C
T ss_pred C
Confidence 4
No 421
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.28 E-value=6.7e-05 Score=81.71 Aligned_cols=130 Identities=12% Similarity=0.169 Sum_probs=79.7
Q ss_pred HHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEEecccc------chhhhhhhhhc---CCCeEEEEeecCCCCCc
Q 005959 483 TAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAH------FGGFNSALLEK---GKSVWVMNVVPTIGTNH 553 (667)
Q Consensus 483 ~~v~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~~R~vlDm~~~------~g~faa~l~~~---~~~vwvmnv~p~~~~~~ 553 (667)
.-...|.+.|.++.. .-.+|||+||| .||....|... +..|..+-+.|.-
T Consensus 201 ~y~~~Ye~lL~~l~~-----------------~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m---- 259 (419)
T 3sso_A 201 WFTPHYDRHFRDYRN-----------------QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS---- 259 (419)
T ss_dssp BCHHHHHHHHGGGTT-----------------SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----
T ss_pred hHHHHHHHHHHhhcC-----------------CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----
Confidence 345677777765531 23689999999 78877777652 2234444444432
Q ss_pred hhhHhccccccccccccc-CCCCC----CCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-----
Q 005959 554 LPMILDRGFVGVLHDWCE-AFPTY----PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----- 623 (667)
Q Consensus 554 l~~~~~RGlig~~~~~c~-~f~ty----p~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----- 623 (667)
. .....+-=+..|-.+ +|... +.+||+|.+++. ++. ......|-|+=|+|||||++|+.|-
T Consensus 260 ~--~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs--H~~-----~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~ 330 (419)
T 3sso_A 260 H--VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS--HIN-----AHVRTSFAALFPHVRPGGLYVIEDMWTAYW 330 (419)
T ss_dssp G--GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC--CCH-----HHHHHHHHHHGGGEEEEEEEEEECGGGGGC
T ss_pred h--hcCCCcEEEEecccccchhhhhhcccCCccEEEECCc--ccc-----hhHHHHHHHHHHhcCCCeEEEEEecccccC
Confidence 1 111122112222221 12200 378999998754 222 2345689999999999999999632
Q ss_pred -------------HHHHHHHHHHHhhCCCeeE
Q 005959 624 -------------ARLIESARALTTRLKWDAR 642 (667)
Q Consensus 624 -------------~~~~~~~~~~~~~~~W~~~ 642 (667)
..+++.++++.+.++|.-.
T Consensus 331 p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~~ 362 (419)
T 3sso_A 331 PGFGGQADPQECSGTSLGLLKSLIDAIQHQEL 362 (419)
T ss_dssp TBTTCCSSTTCCTTSHHHHHHHHHHHHTGGGS
T ss_pred cccCCCccCCcchhHHHHHHHHHHHHhccccc
Confidence 3578999999999998643
No 422
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.28 E-value=0.00038 Score=65.56 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=58.0
Q ss_pred CCEEEEeCCCCc-hHHHHHhh-cCCceeEEEEecCCHHHHHHHHHcCCCceEEeecccCCCCCC--CCccEEEecccccc
Q 005959 254 VRTILDIGCGYG-SFGAHLFS-KELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPS--LSFDMLHCARCGVD 329 (667)
Q Consensus 254 ~~~VLDIGCGtG-~~t~~La~-~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~Lpfpd--~sFDlV~~s~~ll~ 329 (667)
..+|||||||.| ..+..|++ .|+ .|+++|+++..++ +.+.|+.+ |..+ ..||+|++.+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~----------~v~dDiF~-P~~~~Y~~~DLIYsirP--- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG----------IVRDDITS-PRMEIYRGAALIYSIRP--- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT----------EECCCSSS-CCHHHHTTEEEEEEESC---
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc----------eEEccCCC-CcccccCCcCEEEEcCC---
Confidence 469999999999 69999997 654 4899999987665 55556554 3332 47999998765
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 330 ~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.++....+.++.+.+ |.-++|...
T Consensus 99 -P~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 99 -PAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp -CTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred -CHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 344455666666544 456666544
No 423
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.28 E-value=0.00015 Score=76.36 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=59.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHh----cccc---cccccccccCCCCCC-CccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~----~RGl---ig~~~~~c~~f~typ-~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..+.+. +. -.|+-+|....+..+- +.|+ |-+++.-.+.++ .| .+||+|.+..+
T Consensus 40 ~~VLDiGcGtG~ls~~la~~--g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKH--GA--KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHT--CC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred CEEEEecCccHHHHHHHHHC--CC--CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 47999999999999988873 21 1233333332233222 2354 223332223333 34 78999999766
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 619 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i 619 (667)
+.... ..-.+..++-+++|+|+|||.+|
T Consensus 115 ~~~l~---~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 115 GYFLL---YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTBS---TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcc---cHHHHHHHHHHHHhhcCCCeEEE
Confidence 54443 33456678899999999999998
No 424
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.26 E-value=6.2e-05 Score=74.05 Aligned_cols=89 Identities=16% Similarity=0.095 Sum_probs=59.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-----cccccccccccCCCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----Glig~~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
.+|||+|||.|.++..|.+.. -+|+-+|-. ..+..+-++ .+--+..|..+.++ -+.+||+|.++.++.
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIV-----DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAP 145 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-----SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBS
T ss_pred CEEEEEcCCCCHHHHHHHHHc-----CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHH
Confidence 379999999999999998742 244444543 444444443 22222334444333 237899999987775
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
... -++-|+|+|||.+++...
T Consensus 146 ~~~------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 146 TLL------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SCC------------HHHHHTEEEEEEEEEEEC
T ss_pred HHH------------HHHHHHcCCCcEEEEEEc
Confidence 443 368899999999999754
No 425
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.25 E-value=9.5e-05 Score=77.43 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=74.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccccccccccCCCCC-CCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTY-PRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig~~~~~c~~f~ty-p~tyDl~H~~~~~~ 590 (667)
..|||+|||.|+++|.++..... -.|+-+|-. ..+..+-++ |+ .-+.-.|.-...+ +.+||+|..+..-
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~g---a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~- 198 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYG---MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA- 198 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTC---CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC-
T ss_pred CEEEEECCCccHHHHHHHHHccC---CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc-
Confidence 58999999999998776542112 234444443 455544443 55 2121112212222 3899999875431
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEcCHHHHH----HH-HHHHhhCCCeeEEeeeccCC-CccEEEEEcc
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIE----SA-RALTTRLKWDARVIEIESNS-DERLLICQKP 660 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~----~~-~~~~~~~~W~~~~~~~~~~~-~~~~li~~K~ 660 (667)
-....++-|+-|+|||||.+++++....-. .+ ..+.+ .|+.....+..+. .+.|++++|.
T Consensus 199 --------~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 199 --------EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp --------SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEEC
T ss_pred --------cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEcc
Confidence 123368999999999999999987532100 00 01222 5776665544443 3557777763
No 426
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.25 E-value=7.4e-05 Score=74.38 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=76.2
Q ss_pred EEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHh----ccccc----cc-ccccccCCCCC-CCccccccc
Q 005959 518 NVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMIL----DRGFV----GV-LHDWCEAFPTY-PRTYDLVHA 585 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~----~RGli----g~-~~~~c~~f~ty-p~tyDl~H~ 585 (667)
+|||+|||.|.++.+|.+. ...- .|+-+|-. ..+.++- +.|+- -+ ..|-.+..+.+ +.+||+|.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 8999999999999988762 0011 23333332 2332221 22332 11 12222333333 478999987
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcC------------HHHHHHHHHHHhhCCCeeEEeeeccCCCcc
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALTTRLKWDARVIEIESNSDER 653 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 653 (667)
+..... ...++-++-|+|||||++++.|- ......++++.+.++++-.+.-+----.+.
T Consensus 136 d~~~~~---------~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG 206 (221)
T 3dr5_A 136 QVSPMD---------LKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAG 206 (221)
T ss_dssp CCCTTT---------HHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTC
T ss_pred cCcHHH---------HHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccch
Confidence 643332 33577788899999999998422 133445666666666652221111111478
Q ss_pred EEEEEccccc
Q 005959 654 LLICQKPFFK 663 (667)
Q Consensus 654 ~li~~K~~~~ 663 (667)
++|++|+.-.
T Consensus 207 l~~~~~~~~~ 216 (221)
T 3dr5_A 207 LTVVTKALEH 216 (221)
T ss_dssp EEEEEECCCC
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 427
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.24 E-value=6.2e-05 Score=75.02 Aligned_cols=128 Identities=13% Similarity=0.130 Sum_probs=72.1
Q ss_pred eEEEeccccchhhhhhhhhcCC-CeEEEEeecCCCC-CchhhHhc----ccccc----cccccccCCCCCC-----Cccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP-----RTYD 581 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~-~vwvmnv~p~~~~-~~l~~~~~----RGlig----~~~~~c~~f~typ-----~tyD 581 (667)
++|||+|||.|.++.+|.+.-. .. .|+-.|-. ..+.++-+ .|+-. +..|..+.++..| .+||
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 5899999999999999986311 11 22333332 33333322 24311 1222222222222 6799
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC------------HHHHHHHHHHHh----hCCCeeEEee
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALTT----RLKWDARVIE 645 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~~~----~~~W~~~~~~ 645 (667)
+|.++..... ...++-++-|+|||||++++.+. ......++++.+ .-+++.....
T Consensus 151 ~V~~d~~~~~---------~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 221 (232)
T 3cbg_A 151 LIFIDADKRN---------YPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP 221 (232)
T ss_dssp EEEECSCGGG---------HHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred EEEECCCHHH---------HHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE
Confidence 9988654322 33578888899999999999532 223344444443 3456555543
Q ss_pred eccCCCccEEEEEcc
Q 005959 646 IESNSDERLLICQKP 660 (667)
Q Consensus 646 ~~~~~~~~~li~~K~ 660 (667)
+ .+.+.+++|.
T Consensus 222 ~----~dG~~~~~~~ 232 (232)
T 3cbg_A 222 L----GDGMTLALKK 232 (232)
T ss_dssp S----BTCEEEEEEC
T ss_pred c----CCeEEEEEeC
Confidence 2 2568888773
No 428
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.22 E-value=6.4e-05 Score=71.94 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=59.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cc-cccccccCCCCC-CCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTY-PRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~c~~f~ty-p~tyDl~H~~~ 587 (667)
.+|||+|||.|.++.++++.+.. .|+-+|-. ..+..+-+ .|+ +- +..|..+..+.+ +.+||+|-++.
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA----SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC----eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 47999999999999977763211 23444433 33333322 233 11 222332222222 47899999977
Q ss_pred ccccccCCCCCCCcchhheeccc--cccCCcEEEEEcC
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDR--ILRPEGWVIIRDT 623 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dR--iLRP~G~~i~~d~ 623 (667)
.|.... -.+..++-++-| +|+|||.+++...
T Consensus 122 p~~~~~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 122 PYNVDS-----ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CTTSCH-----HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCcch-----hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 655421 234578888888 9999999999753
No 429
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.22 E-value=0.00048 Score=69.68 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=63.4
Q ss_pred CCCCCCCceeEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHhccc-ccccccccccC--CCCCCCccc
Q 005959 508 DPSPPYNMVRNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRG-FVGVLHDWCEA--FPTYPRTYD 581 (667)
Q Consensus 508 ~~~~~~~~~R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~~RG-lig~~~~~c~~--f~typ~tyD 581 (667)
...+++|. +|||+|||.|.|+.+|.+. +-.|....+.|.-...-...+-+++ +.-+..|-+.+ .+.-+.++|
T Consensus 72 ~l~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 72 ELPVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred hcCCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEE
Confidence 34455554 8999999999999999852 1235555554432211122333444 44555555543 222336788
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
+|+++-.+. -....++-|+-|+|+|||.++|.
T Consensus 150 vVf~d~~~~--------~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 150 GLYADVAQP--------EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEECCCCT--------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccCC--------hhHHHHHHHHHHhccCCCEEEEE
Confidence 887642211 12346888999999999999986
No 430
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.21 E-value=3.3e-05 Score=71.75 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=56.8
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc-c-ccccccccCCCCCC---Ccccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-V-GVLHDWCEAFPTYP---RTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl-i-g~~~~~c~~f~typ---~tyDl~H~~ 586 (667)
.+|||+|||.|.++.+|.+.... |+-+|-. ..+..+-+ .|+ + =+..|..+..+..+ .+||+|.++
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~-----v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE-----AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE-----EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe-----EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 47999999999999999874322 4555544 34433332 232 1 11223333222222 379999998
Q ss_pred CccccccCCCCCCCcchhheecc--ccccCCcEEEEEcC
Q 005959 587 GLLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDT 623 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~d--RiLRP~G~~i~~d~ 623 (667)
..|. . . ...++-++- |+|+|||.+++...
T Consensus 118 ~~~~--~---~---~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 118 PPYA--M---D---LAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp CCTT--S---C---TTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred CCCc--h---h---HHHHHHHHHhhcccCCCcEEEEEeC
Confidence 7765 1 1 223444555 99999999999643
No 431
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.20 E-value=0.00026 Score=70.89 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=66.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------------ccc---ccccccccCCCC-C-CC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------------GFV---GVLHDWCEAFPT-Y-PR 578 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------------Gli---g~~~~~c~~f~t-y-p~ 578 (667)
..|||+|||.|+|+.+|...... .+|+-+|-. .-+..+-++ |+- -+..|..+.++. + +.
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE---DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT---SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC---CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 57999999999999999863212 244444543 333333221 431 122233222221 2 26
Q ss_pred ccccccccCccc-ccc---CCCCCCCcchhheeccccccCCcEEEE-EcCHHHHHHHHHHHhhCCC
Q 005959 579 TYDLVHAEGLLS-LES---GHRHRCSTLDIFTEIDRILRPEGWVII-RDTARLIESARALTTRLKW 639 (667)
Q Consensus 579 tyDl~H~~~~~~-~~~---~~~~~c~~~~~l~E~dRiLRP~G~~i~-~d~~~~~~~~~~~~~~~~W 639 (667)
++|.|... |. .+. ....|-....++-++-|+|+|||.+++ .|..+..+.+.+.+..-.+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 78877532 21 111 000112224789999999999999998 4776666666655554433
No 432
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.20 E-value=0.00024 Score=71.37 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=67.9
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----------ccc--cc-cccccccCCC--CCCCc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----------RGF--VG-VLHDWCEAFP--TYPRT 579 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----------RGl--ig-~~~~~c~~f~--typ~t 579 (667)
-..|||+|||.|.|+.+|....... +|+-+|-. ..+..+-+ .|+ |- +..|..+.++ .-+.+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~---~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDT---LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTS---EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCC---eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3579999999999999998632122 33333433 33322221 232 11 2223322222 11479
Q ss_pred cccccccCccccccC---CCCCCCcchhheeccccccCCcEEEEE-cCHHHHHHHHHHHhhCC-CeeE
Q 005959 580 YDLVHAEGLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLK-WDAR 642 (667)
Q Consensus 580 yDl~H~~~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~-W~~~ 642 (667)
||+|..... ..|.. .+.|.....+|-|+-|+|+|||.+++. |.....+.+.+.+..-- |+..
T Consensus 124 ~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 124 LTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred eeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 999875321 22210 113344457899999999999999985 66666666666554443 4433
No 433
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.20 E-value=0.00032 Score=70.65 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=57.8
Q ss_pred eEEEeccccchhhhhhhhhcCCC-eEEEEeecCCC----CCchhhHhcc----cc---ccc-ccc-cc-cCCCCCCCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIG----TNHLPMILDR----GF---VGV-LHD-WC-EAFPTYPRTYD 581 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~-vwvmnv~p~~~----~~~l~~~~~R----Gl---ig~-~~~-~c-~~f~typ~tyD 581 (667)
..|||+|||.|.++..|.+...+ .-|.-|=+... +..+..+-++ |+ +-+ ..| .. +..+.-+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 47999999999999999873111 32333333221 1255544332 32 111 122 21 22222238999
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+|++.+++.+.. + ...++-.+.++++|||++++.+
T Consensus 125 ~v~~~~~l~~~~---~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFA---S---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSS---C---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCC---C---HHHHHHHHHHHhCCCCEEEEEE
Confidence 999999987665 2 1234445566666799999963
No 434
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.19 E-value=0.00024 Score=70.30 Aligned_cols=135 Identities=16% Similarity=0.184 Sum_probs=71.2
Q ss_pred eEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHhcc-cccccccccccC--CCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~~R-Glig~~~~~c~~--f~typ~tyDl~H~~~~~~ 590 (667)
..|||+|||.|.|+..|.+. ...|..+-+.|.--...+..+-.+ ++--+..|..+. ++..+.+||+|.++.. .
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-~ 157 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-Q 157 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-C
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-C
Confidence 47999999999999999863 123333322221000112222222 232233444432 2323478999998443 1
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEcCHH----------HHHHHHHHHhhCCCeeEE-eeeccCC-CccEEEEE
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR----------LIESARALTTRLKWDARV-IEIESNS-DERLLICQ 658 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~----------~~~~~~~~~~~~~W~~~~-~~~~~~~-~~~~li~~ 658 (667)
.. ....++.++-|+|+|||.+++.-... .+.+..++++...|+... .+.+.-+ ..-+++++
T Consensus 158 ~~-------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 158 PD-------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp TT-------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred cc-------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 11 11235677999999999999953321 122223555666677654 3333222 23445555
Q ss_pred c
Q 005959 659 K 659 (667)
Q Consensus 659 K 659 (667)
|
T Consensus 231 ~ 231 (233)
T 2ipx_A 231 Y 231 (233)
T ss_dssp E
T ss_pred e
Confidence 4
No 435
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.18 E-value=5.7e-05 Score=74.76 Aligned_cols=94 Identities=11% Similarity=0.182 Sum_probs=60.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc---cc-cccccccCCCCC--CCccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFPTY--PRTYDLVHA 585 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl---ig-~~~~~c~~f~ty--p~tyDl~H~ 585 (667)
.+|||+|||.|.++.+|.+. .+ .-+|+-+|-. ..+..+-++ |+ |- +..|..+..+.. +.+||+|.+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~-~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQA-LP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHH-CT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHH-CC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 48999999999999999873 11 1234444543 444444443 43 11 233444433333 478999988
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+..... ...+|-++-|+|+|||.+++.+
T Consensus 133 ~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKGQ---------YRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGSC---------HHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHHH---------HHHHHHHHHHHcCCCeEEEEEc
Confidence 655432 3368889999999999999974
No 436
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.18 E-value=0.00079 Score=68.36 Aligned_cols=120 Identities=12% Similarity=0.043 Sum_probs=70.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc-------ccc---cccc-cccccCCC-----CC-CC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD-------RGF---VGVL-HDWCEAFP-----TY-PR 578 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~-------RGl---ig~~-~~~c~~f~-----ty-p~ 578 (667)
.+|||+|||.|.++-.|... .+- .+|+-+|-. ..+..+-+ .|+ +-++ .|..+..+ .+ +.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~-~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAAR-LEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHH-CTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CEEEEeCChHhHHHHHHHHh-CCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 57999999999999988863 221 234444443 32322221 233 1222 23332211 12 37
Q ss_pred ccccccccCccccccC------------CCCCCCcchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCe
Q 005959 579 TYDLVHAEGLLSLESG------------HRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWD 640 (667)
Q Consensus 579 tyDl~H~~~~~~~~~~------------~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~ 640 (667)
+||+|-++--|..... ....+.+..++-++-|+|+|||++++--..+...++...++.- |.
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~ 187 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FG 187 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CC
Confidence 8999999854432200 0033567788999999999999999876666666777766663 65
No 437
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.17 E-value=0.00015 Score=74.62 Aligned_cols=95 Identities=14% Similarity=0.018 Sum_probs=63.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc-cccccccccC-C---CCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VGVLHDWCEA-F---PTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl-ig~~~~~c~~-f---~typ~tyDl~H~~~~~~ 590 (667)
..|||+|||.|.++..|.+... .|+-+|.. .-+..+-++-- -.+-.+|... + ...+.+||+|-++.++.
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~-----~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA-----SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CEEEEEeCcchHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhH
Confidence 4799999999999999987433 34555554 45555444321 0122333221 1 12246899999998887
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
++. .-....+|-+|-|+| |||.++++
T Consensus 122 ~~~----~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 122 RFT----TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GSC----HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred hCC----HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 653 123556899999999 99999997
No 438
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.17 E-value=0.0003 Score=69.14 Aligned_cols=130 Identities=16% Similarity=0.265 Sum_probs=70.3
Q ss_pred eEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHh----cc-cccccccccccC--CCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMIL----DR-GFVGVLHDWCEA--FPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~----~R-Glig~~~~~c~~--f~typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++.+|.+. ...|..+-+.| ..+..+. ++ ++--+..|..+. +...+.+||+|.++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 37999999999999999863 12343333322 1111111 11 222223343331 22335689999975
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcC---------HH-H-HHHHHHHHhhCCCeeEEe-eeccCC-Ccc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT---------AR-L-IESARALTTRLKWDARVI-EIESNS-DER 653 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~---------~~-~-~~~~~~~~~~~~W~~~~~-~~~~~~-~~~ 653 (667)
.... -....++-++-|+|+|||++++.-. .. + -++++.+.+. ++.... +.+... +.-
T Consensus 151 ~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--f~~~~~~~~~~~~~~~~ 220 (227)
T 1g8a_A 151 VAQP--------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY--FEVIERLNLEPYEKDHA 220 (227)
T ss_dssp CCST--------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTTTSSSEE
T ss_pred CCCH--------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh--ceeeeEeccCcccCCCE
Confidence 4311 1112458899999999999998411 11 1 2456666333 775433 222222 344
Q ss_pred EEEEEcc
Q 005959 654 LLICQKP 660 (667)
Q Consensus 654 ~li~~K~ 660 (667)
+++++|+
T Consensus 221 ~~~~~~~ 227 (227)
T 1g8a_A 221 LFVVRKT 227 (227)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 6777763
No 439
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.16 E-value=8.9e-05 Score=79.12 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=63.0
Q ss_pred ceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc-ccccccccccccCCCCCCCccccccccCcccccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~-RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
....|||+|||.|.++.+|.+....+-+ +-.|-+..+..+-+ .++--+.+|..+++| . ||+|.+..++..+.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~---~-~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKG---INFDLPQVIENAPPLSGIEHVGGDMFASVP---Q-GDAMILKAVCHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHTTCCCCTTEEEEECCTTTCCC---C-EEEEEEESSGGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeE---EEeChHHHHHhhhhcCCCEEEeCCcccCCC---C-CCEEEEecccccCC
Confidence 4578999999999999999874323322 22222211211111 123333455555544 4 99999999998775
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
. . ....+|-++-|+|+|||.++|.|
T Consensus 282 d--~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 D--E--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp H--H--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred H--H--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 1 12368999999999999999863
No 440
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.15 E-value=8.1e-05 Score=74.29 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=53.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-Cch-hh---Hh----cccccc--cccccccCCCC-CCCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHL-PM---IL----DRGFVG--VLHDWCEAFPT-YPRTYDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l-~~---~~----~RGlig--~~~~~c~~f~t-yp~tyDl~H 584 (667)
..|||+|||.|.++.+|...... .+|+-+|-. .++ .+ +- +.|+-. ....=.+.+|. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~---~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQN---TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTT---EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCC---CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 57999999999999999842222 234445544 443 22 22 345422 11111233332 113445554
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
+...+..... ..+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~~~-~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLE-YVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHH-HHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhh-hhhcchHHHHHHHHHhcCCCcEEEE
Confidence 4322111000 0112234688999999999999999
No 441
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.15 E-value=5.3e-05 Score=71.37 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=59.2
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----cccc----ccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGli----g~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.++.+|.+. +. -+|+-+|-. ..+..+-+ .|+- =+..|+.+.++..+..||+|.++.
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~--~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSR--GM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHT--TC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHc--CC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 47999999999999999873 22 234555543 33433322 2331 123445443444457799999976
Q ss_pred ccccccCCCCCCCcchhheecc--ccccCCcEEEEEcC
Q 005959 588 LLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDT 623 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~d--RiLRP~G~~i~~d~ 623 (667)
.|... ....++-++- |+|+|||.+++...
T Consensus 109 ~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 109 PYAKE-------TIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp SSHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcc-------hHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 65321 1223444554 99999999999643
No 442
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.12 E-value=0.00033 Score=69.77 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=67.5
Q ss_pred eEEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHhcc-----cc---cccccccccC-CCCCCCccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----GF---VGVLHDWCEA-FPTYPRTYDLVHA 585 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~~R-----Gl---ig~~~~~c~~-f~typ~tyDl~H~ 585 (667)
.+|||+|||.|.++.+|.+. .... +|+-+|-. ..+..+-++ |. --+..|..+. |+. .+||+|.+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~--~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE--AAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT--TCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC--CCcCEEEE
Confidence 48999999999999999873 1011 33444433 444444433 42 1123344443 432 68999987
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH-HHHHHHHHHHhhCCCe
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWD 640 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-~~~~~~~~~~~~~~W~ 640 (667)
+ . -....+|-++-|+|+|||.+++.... +.+.++.+.++...|.
T Consensus 173 ~-----~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----L------MEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----S------SCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----C------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2 1 12236889999999999999987654 3566666656555555
No 443
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.12 E-value=8.1e-05 Score=74.14 Aligned_cols=130 Identities=12% Similarity=0.185 Sum_probs=74.6
Q ss_pred eEEEeccccchhhhhhhhhcCC-CeEEEEeecCCCC-CchhhHhcc----cccc---c-cc----------------ccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR----GFVG---V-LH----------------DWC 570 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~-~vwvmnv~p~~~~-~~l~~~~~R----Glig---~-~~----------------~~c 570 (667)
.+|||+|||.|.++..|.+.-. .. +|+-+|-. ..+..+-++ |+-. + .. .|-
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4799999999999999986310 11 23333332 333333222 3311 1 11 132
Q ss_pred cCCCCCC-CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC------------HHHHHHHHH----H
Q 005959 571 EAFPTYP-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARA----L 633 (667)
Q Consensus 571 ~~f~typ-~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~----~ 633 (667)
..|+. + .+||+|.++..... ...++-++-|+|||||.+++.+- ......++. +
T Consensus 139 ~~f~~-~~~~fD~I~~~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 208 (239)
T 2hnk_A 139 SDFAF-GPSSIDLFFLDADKEN---------YPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELV 208 (239)
T ss_dssp TTTCC-STTCEEEEEECSCGGG---------HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHH
T ss_pred ccccC-CCCCcCEEEEeCCHHH---------HHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHH
Confidence 33332 2 67999988644332 23678889999999999999651 122333333 4
Q ss_pred HhhCCCeeEEeeeccCCCccEEEEEccccc
Q 005959 634 TTRLKWDARVIEIESNSDERLLICQKPFFK 663 (667)
Q Consensus 634 ~~~~~W~~~~~~~~~~~~~~~li~~K~~~~ 663 (667)
...-.+++..... .+.+.+++|..-.
T Consensus 209 ~~~~~~~~~~~p~----~~g~~~~~~~~~~ 234 (239)
T 2hnk_A 209 YNDSLVDVSLVPI----ADGVSLVRKRLEH 234 (239)
T ss_dssp HHCTTEEEEEECS----TTCEEEEEECCCC
T ss_pred hhCCCeEEEEEEc----CCceEeeeehhhc
Confidence 4444566665532 2568889887654
No 444
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.11 E-value=0.00013 Score=70.75 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=58.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc--cc-cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl--ig-~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ |+ +- +..|..+.++. ..+||+|.++..
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 152 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLVQ-----HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RAPFDAIIVTAA 152 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEESSB
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-----EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CCCccEEEEccc
Confidence 4799999999999999987432 33444443 444444332 33 11 22344343222 478999999877
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCH
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 624 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 624 (667)
+.... =++-|+|+|||++++.-..
T Consensus 153 ~~~~~------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIP------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCC------------THHHHTEEEEEEEEEEECS
T ss_pred hhhhh------------HHHHHhcccCcEEEEEEcC
Confidence 76544 1578999999999996443
No 445
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.10 E-value=0.00024 Score=67.74 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=54.0
Q ss_pred eEEEeccccchhhhhhhhhcC-----------CCeEEEEeecCCCCCchhhHhccccccccccccc---------CCCCC
Q 005959 517 RNVLDMNAHFGGFNSALLEKG-----------KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCE---------AFPTY 576 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~-----------~~vwvmnv~p~~~~~~l~~~~~RGlig~~~~~c~---------~f~ty 576 (667)
.+|||+|||.|.++.+|.+.- ..|..+-+.|......+.++ . -.|... .++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~-- 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLP-- 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSG--
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcC--
Confidence 489999999999999998741 22444444332111111111 0 111111 122
Q ss_pred CCccccccccCcccccc----C-CCCCCCcchhheeccccccCCcEEEEEc
Q 005959 577 PRTYDLVHAEGLLSLES----G-HRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 577 p~tyDl~H~~~~~~~~~----~-~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
..+||+|-++..+.... . .........++-|+-|+|||||.+++.+
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 25899999865433210 0 0000011357889999999999999973
No 446
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.07 E-value=0.00012 Score=74.05 Aligned_cols=96 Identities=9% Similarity=0.072 Sum_probs=56.0
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHh----cccc---cccc-cccccCCCCC------CCcc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF---VGVL-HDWCEAFPTY------PRTY 580 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~----~RGl---ig~~-~~~c~~f~ty------p~ty 580 (667)
-++|||+|||.|.++..|.+.-.+- -.|+-.|-. ..+.++- +.|+ |-++ .|..+..+.. +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3589999999999999887631100 123333332 2232222 2344 1121 2333322322 4789
Q ss_pred ccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 581 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 581 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
|+|.++.... ....++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~~~---------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADKD---------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCST---------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCchH---------HHHHHHHHHHHhCCCCeEEEEec
Confidence 9998854322 23467778889999999999854
No 447
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.07 E-value=0.0003 Score=74.55 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=57.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHh----cccc---cccccccccCCCCCC-CccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~----~RGl---ig~~~~~c~~f~typ-~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..+.+.+. . .|+-+|....+..+- +.|+ |-+++.=.+.++ +| .+||+|-+..+
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~-~---~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA-K---KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWM 140 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-S---EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCC
T ss_pred CEEEEeeccCcHHHHHHHHcCC-C---EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCc
Confidence 4799999999999998887321 1 223333322233222 2343 222322222333 34 78999998764
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 619 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i 619 (667)
..... ..-.+..+|-++.|+|+|||.+|
T Consensus 141 ~~~l~---~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLL---FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBT---TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcc---CHHHHHHHHHHHHhhcCCCcEEE
Confidence 32222 22345568899999999999998
No 448
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.07 E-value=0.00011 Score=73.58 Aligned_cols=96 Identities=9% Similarity=0.040 Sum_probs=56.2
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHh----cccccc---c-ccccccCCCCC------CCcc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGFVG---V-LHDWCEAFPTY------PRTY 580 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~----~RGlig---~-~~~~c~~f~ty------p~ty 580 (667)
-++|||+|||.|..+.+|.+.-.+- -.|+-.|-. ..+.++- +.|+-. + ..|..+.++.. +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4689999999999999887630000 122333332 2333222 235411 1 22333333322 4789
Q ss_pred ccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 581 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 581 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
|+|.++.--. ....++-++-|+|||||++++.+
T Consensus 149 D~I~~d~~~~---------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP---------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH---------HHHHHHHHHHHhcCCCeEEEEec
Confidence 9998864322 23467778889999999999864
No 449
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.07 E-value=7.1e-05 Score=73.50 Aligned_cols=127 Identities=15% Similarity=0.121 Sum_probs=71.0
Q ss_pred eEEEeccccchhhhhhhhhcCC-CeEEEEeecCCCC-CchhhHhc----ccc---cccc-cccccCCCCCC-----Cccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGF---VGVL-HDWCEAFPTYP-----RTYD 581 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~-~vwvmnv~p~~~~-~~l~~~~~----RGl---ig~~-~~~c~~f~typ-----~tyD 581 (667)
++|||+|||.|.++.+|.+.-. .. .|+-+|-. ..+..+-+ .|+ +-++ .|..+.++..+ .+||
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 5899999999999999986211 11 23333332 33333322 243 1111 12222222222 6799
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC------------HHHHHHHHHH----HhhCCCeeEEee
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARAL----TTRLKWDARVIE 645 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~----~~~~~W~~~~~~ 645 (667)
+|.++... .....++-++-|+|||||.+++.+. ......++++ ...=++++....
T Consensus 148 ~v~~d~~~---------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 218 (229)
T 2avd_A 148 VAVVDADK---------ENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP 218 (229)
T ss_dssp EEEECSCS---------TTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEEECCCH---------HHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe
Confidence 99985432 2234678888899999999999532 2233344443 333445555543
Q ss_pred eccCCCccEEEEEc
Q 005959 646 IESNSDERLLICQK 659 (667)
Q Consensus 646 ~~~~~~~~~li~~K 659 (667)
. .+.++|++|
T Consensus 219 ~----~dGl~~~~k 228 (229)
T 2avd_A 219 L----GDGLTLAFK 228 (229)
T ss_dssp S----TTCEEEEEE
T ss_pred c----CCceEEEEE
Confidence 2 357888877
No 450
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.06 E-value=0.00033 Score=74.30 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=59.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc----ccc---cccccccccCCCCCCCccccccccCcc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~----RGl---ig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
.+|||+|||.|.++..+.+.+. . .|+-+|....+..+-+ .|+ |-+++.=-+.++ .|..||+|-+..++
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~-~---~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGA-R---KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMG 126 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-S---EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCB
T ss_pred CEEEEcCCCccHHHHHHHhCCC-C---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCch
Confidence 4899999999999998886321 1 2222332223333322 244 222222122222 35789999998887
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEE
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 621 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 621 (667)
.++. .-.+...+.++-|+|+|||.+++.
T Consensus 127 ~~~~----~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 127 YMLF----NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTBT----TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCC----hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 6654 133556778999999999999853
No 451
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.06 E-value=0.00047 Score=68.18 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=68.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc----cccccccccCC-CCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVLHDWCEAF-PTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl----ig~~~~~c~~f-~typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++.+|.+. ..+|+-+|-. ..+..+-++ |+ --+..|..+.+ + +.+||+|-++
T Consensus 93 ~~vldiG~G~G~~~~~l~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~ 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV-----AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP--EGIFHAAFVD 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH-----SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC--TTCBSEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHh-----CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC--CCcccEEEEC
Confidence 37999999999999999873 2355556654 555555443 33 12234555544 3 2689999872
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCe
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWD 640 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~ 640 (667)
- -....++-++-|+|+|||.+++... .+.+.++...++.. |.
T Consensus 166 ~-----------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 166 V-----------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp S-----------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred C-----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 1 1233678889999999999999766 45666666655554 44
No 452
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.05 E-value=0.00028 Score=75.47 Aligned_cols=97 Identities=15% Similarity=0.197 Sum_probs=63.2
Q ss_pred CCceeEEEeccccchhhhhhhhhcCCC--eEEEEeecCCCCCchhhHhcc-cccccccccccCCCCCCCccccccccCcc
Q 005959 513 YNMVRNVLDMNAHFGGFNSALLEKGKS--VWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLL 589 (667)
Q Consensus 513 ~~~~R~vlDm~~~~g~faa~l~~~~~~--vwvmnv~p~~~~~~l~~~~~R-Glig~~~~~c~~f~typ~tyDl~H~~~~~ 589 (667)
+...+.|||+|||.|.++.+|.+.... +.+.-+ +..+..+-++ ++-=+-+|.-+++| .. |+|.+..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~d~~~~~p---~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-----PHVIQDAPAFSGVEHLGGDMFDGVP---KG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-----HHHHHhhhhcCCCEEEecCCCCCCC---CC-CEEEEechh
Confidence 345789999999999999999873212 222222 1111111111 23223455555555 34 999999999
Q ss_pred ccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 590 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 590 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
..|.. . ....+|-++=|.|+|||.++|.|
T Consensus 272 h~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWSD--E--HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBCH--H--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCCH--H--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 88862 1 23368999999999999999964
No 453
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.03 E-value=0.00048 Score=70.22 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-----cc---cccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GF---VGVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----Gl---ig~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|+++..|.+.-.+- ..|+-+|-. ..+..+-++ |+ --+..|..++++. .+||+|-++
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~fD~Vi~~- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD--QMYDAVIAD- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS--CCEEEEEEC-
T ss_pred CEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC--CCccEEEEc-
Confidence 489999999999999998630011 133444443 444444333 42 1123455555543 689999872
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCHH-HHHHHHHHHhhCCCee
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR-LIESARALTTRLKWDA 641 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~-~~~~~~~~~~~~~W~~ 641 (667)
. -....+|-++-|+|+|||.+++.+... ..+++.+.+....|..
T Consensus 187 ~----------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 187 I----------PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp C----------SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred C----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 1 122468889999999999999976543 5666666666555553
No 454
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.99 E-value=0.00075 Score=69.73 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=56.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCC--C-Cchhh-Hhccccccc--ccccccCCCCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG--T-NHLPM-ILDRGFVGV--LHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~--~-~~l~~-~~~RGlig~--~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
..|||+|||.|+|+..|.+. ..|.-+-+.|.-. . +.+.. .+.-++.-+ -.|- +.++ +.+||+|-|+..+.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDV-TKME--PFQADTVLCDIGES 159 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCG-GGCC--CCCCSEEEECCCCC
T ss_pred CEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcH-hhCC--CCCcCEEEECCCcC
Confidence 58999999999999999874 5677666666310 0 10000 000011111 1222 2244 58999999875521
Q ss_pred cccCCCCCCCcchhheeccccccCCc--EEEEE
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEG--WVIIR 621 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G--~~i~~ 621 (667)
.-....+.-....+|-++.|+|+||| .|++.
T Consensus 160 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 10000000000126778999999999 99885
No 455
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.97 E-value=0.0014 Score=70.75 Aligned_cols=102 Identities=13% Similarity=0.038 Sum_probs=70.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CceEEeecccCC----CCCC
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQL----PYPS 315 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------------~~~~~~~da~~L----pfpd 315 (667)
++++||=||.|.|..++.+++.. ...|+.+|+++.+++.|++--. .+.+...|+... .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 46899999999999999999874 3679999999999999987421 123444443221 1134
Q ss_pred CCccEEEecccccccccC---------HHHHHHHHHhcccCCeEEEEEeC
Q 005959 316 LSFDMLHCARCGVDWDQK---------DGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 316 ~sFDlV~~s~~ll~~~~d---------~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
+.||+|+.-..-.....+ ...+++.++++|+|||+++...-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 689999975221110111 13578889999999999998643
No 456
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.93 E-value=0.00021 Score=70.02 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=54.3
Q ss_pred eEEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHhcc----c--------ccccccccccCCCCCCCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYDL 582 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~~R----G--------lig~~~~~c~~f~typ~tyDl 582 (667)
..|||+|||.|.+++.|.+. +... +|+-+|-. ..+..+-++ | +--+..|..+.++ -+.+||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 37999999999999998863 1111 23333433 333333221 1 2122334443322 1368999
Q ss_pred ccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 583 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 583 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
|+++..+. .++-++-|+|+|||.+++.-
T Consensus 155 i~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAP------------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSBBS------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 99866542 35567889999999999964
No 457
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.92 E-value=0.00028 Score=68.63 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=59.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc----ccc-ccccccCCCCC-CCc-ccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGV-LHDWCEAFPTY-PRT-YDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl----ig~-~~~~c~~f~ty-p~t-yDl~H 584 (667)
..|||+|||.|.|+..++... . -.|+-+|-. ..+..+-+ .|+ +-+ ..|..+..+.. +.+ ||+|-
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~--~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQ--A--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTT--C--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CeEEEcCCccCHHHHHHHHcc--C--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 379999999999999876532 1 134555554 44443333 233 111 22333322322 468 99999
Q ss_pred ccCccccccCCCCCCCcchhheec--cccccCCcEEEEEcCHH
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTAR 625 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d~~~ 625 (667)
++..|.. -....++-++ -|+|+|||.+++.....
T Consensus 131 ~~~~~~~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 131 LDPPFHF-------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECCCSSS-------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred ECCCCCC-------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8766531 1234566677 78999999999975543
No 458
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.90 E-value=0.00048 Score=71.17 Aligned_cols=132 Identities=14% Similarity=0.173 Sum_probs=80.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCCCCCCcc---cccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTY---DLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~typ~ty---Dl~H 584 (667)
.+|||+|||.|.++.+|... +- .+|+-+|-. ..+.++-+ .|+ +- +..||.++++ .+| |+|-
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Iv 197 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMIL 197 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEE
T ss_pred CEEEEEeCchhHHHHHHHHC--CC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEE
Confidence 36999999999999999873 21 134444543 44444433 244 22 3456666553 578 9998
Q ss_pred ccCccccccC--------C-----CCCCCcchhheecc-ccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEEeeeccCC
Q 005959 585 AEGLLSLESG--------H-----RHRCSTLDIFTEID-RILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESNS 650 (667)
Q Consensus 585 ~~~~~~~~~~--------~-----~~~c~~~~~l~E~d-RiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 650 (667)
++--+..... . -..++-..++-++= +.|+|||++++.-..+.-+.+.++.+.. .++ .+-.+
T Consensus 198 snPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~----~~~-~D~~g 272 (284)
T 1nv8_A 198 SNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT----VFL-KDSAG 272 (284)
T ss_dssp ECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC----EEE-ECTTS
T ss_pred EcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC----Cee-cccCC
Confidence 8633222110 0 01122236777888 9999999999975555566677766654 222 23445
Q ss_pred CccEEEEEcc
Q 005959 651 DERLLICQKP 660 (667)
Q Consensus 651 ~~~~li~~K~ 660 (667)
.++++++.++
T Consensus 273 ~~R~~~~~~k 282 (284)
T 1nv8_A 273 KYRFLLLNRR 282 (284)
T ss_dssp SEEEEEEECC
T ss_pred CceEEEEEEc
Confidence 6888887664
No 459
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.89 E-value=0.00032 Score=70.61 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=56.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcccc--cccccccccCCCCCCCccccccccCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF--VGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 593 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~RGl--ig~~~~~c~~f~typ~tyDl~H~~~~~~~~~ 593 (667)
.+|||+|||.|.++..|.+.-... +|+-+|-. ..+..+-+++- .=+..|.. .++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----
Confidence 479999999999999998731011 33444444 55555655541 11122222 23322378999998432
Q ss_pred CCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 594 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
...+-|+-|+|||||.+++.+
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEE
T ss_pred --------hhhHHHHHHhcCCCcEEEEEE
Confidence 136789999999999999864
No 460
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.88 E-value=0.0006 Score=66.42 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=67.0
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhH--------hcccc--cccccccccCCCCCCCccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI--------LDRGF--VGVLHDWCEAFPTYPRTYDLVHA 585 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~--------~~RGl--ig~~~~~c~~f~typ~tyDl~H~ 585 (667)
..|||+|||.|.++.+|.+..... +|+-+|-. ..|..+ ..+|+ +-+.+.=.+.++.-+.+ |.++.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR---LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE---EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 579999999999999998741122 34444443 333321 13443 11222112224432345 76662
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEc------------------CHH-HHHHHHHHHhhCCCeeEEe
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD------------------TAR-LIESARALTTRLKWDARVI 644 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d------------------~~~-~~~~~~~~~~~~~W~~~~~ 644 (667)
.-.+..... .+.-+...+|-|+-|+|||||.+++.- ... .-+.++.+...--|++...
T Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 105 LMPWGSLLR-GVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp ESCCHHHHH-HHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred Eccchhhhh-hhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 211111000 000111578999999999999999852 112 2344777888888876654
No 461
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.87 E-value=0.0013 Score=66.84 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=70.2
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc----cccccccccCCCCCCCccccccccCc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl----ig~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
+|||+|||.|.++.+|++.-.+- .+|+-+|-. ..+..+-++ |+ --+..|..+.++. .+||+|-++-
T Consensus 115 ~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~V~~~~- 189 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE--KDVDALFLDV- 189 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC--CSEEEEEECC-
T ss_pred EEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC--CccCEEEECC-
Confidence 79999999999999998630111 144455543 445444443 43 2233455555443 6899998721
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCCee
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDA 641 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~ 641 (667)
-....+|-++-|+|+|||.+++... .+.+.++.+.++...|..
T Consensus 190 ----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 190 ----------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp ----------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred ----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 1123578889999999999999765 446666666666666653
No 462
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.87 E-value=0.00053 Score=69.22 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=54.6
Q ss_pred eEEEeccccchhhhhhhhhc---CCCeEEEEeecCCCCCchhhHhcc-cccccccccccCC--CCCCCccccccccCccc
Q 005959 517 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAF--PTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~---~~~vwvmnv~p~~~~~~l~~~~~R-Glig~~~~~c~~f--~typ~tyDl~H~~~~~~ 590 (667)
-.|||+|||.|++++.|.+. +-.|..+-+.|.-...-+..+-+| .+.-+..|=..+. ...+.+||+|.++..+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 47999999999999988752 113444333222100112223333 3444455544432 1224689999886433
Q ss_pred cccCCCCCCCcchhhe-eccccccCCcEEEEE
Q 005959 591 LESGHRHRCSTLDIFT-EIDRILRPEGWVIIR 621 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~-E~dRiLRP~G~~i~~ 621 (667)
.....+|+ .+.|+|+|||.+++.
T Consensus 157 --------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 --------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 22223444 456799999999985
No 463
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.86 E-value=0.0062 Score=63.23 Aligned_cols=100 Identities=12% Similarity=0.028 Sum_probs=66.1
Q ss_pred CCEEEEeCCCCchHHHHHhhc----CCceeEEEEecCCHH--------------------------HHHHHH----HcCC
Q 005959 254 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGS--------------------------QVQLTL----ERGL 299 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~----g~~~~sV~gvD~S~~--------------------------ml~~A~----ergl 299 (667)
+..|||+|+..|..+..|++. +.....|+++|..+. .++.++ +.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 479999999999988887643 112345777774310 122232 2344
Q ss_pred ---CceEEeecccC-CC-CCCCCccEEEecccccccccCHHHHHHHHHhcccCCeEEEEEeC
Q 005959 300 ---PAMIGSFASKQ-LP-YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (667)
Q Consensus 300 ---~~~~~~~da~~-Lp-fpd~sFDlV~~s~~ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p 356 (667)
.+.+..+++.. +| +++++||+|+.-.- ........|..+.+.|+|||++++.+.
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 35667666533 44 44578999997632 112235789999999999999999886
No 464
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.82 E-value=0.011 Score=61.59 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=65.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH---HHHcCCC-ceEEee-cccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL---TLERGLP-AMIGSF-ASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~---A~ergl~-~~~~~~-da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+||||||++|.++.+.+... .+..|.++|+...--+. .++.+-+ +.+... |+..++- ..+|+|+|-..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-- 169 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-- 169 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC--
T ss_pred CCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc--
Confidence 3699999999999999887763 35579999987541100 0011111 334433 5555544 56999999754
Q ss_pred ccccCH----H---HHHHHHHhcccCC-eEEEEEeCCCCh
Q 005959 329 DWDQKD----G---ILLLEVDRVLKPG-GYFVWTSPLTNP 360 (667)
Q Consensus 329 ~~~~d~----~---~~L~Ei~RvLKPG-G~Lvis~p~~~~ 360 (667)
.-.+++ . ++|.-+.+.|++| |-|++-.+.+..
T Consensus 170 eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 170 ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC
Confidence 222232 1 2566667889999 999998887754
No 465
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.82 E-value=0.00039 Score=74.28 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=63.2
Q ss_pred CceeEEEeccccchhhhhhhhhcCC--CeEEEEeecCCCCCchhhHhcc-cccccccccccCCCCCCCccccccccCccc
Q 005959 514 NMVRNVLDMNAHFGGFNSALLEKGK--SVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 590 (667)
Q Consensus 514 ~~~R~vlDm~~~~g~faa~l~~~~~--~vwvmnv~p~~~~~~l~~~~~R-Glig~~~~~c~~f~typ~tyDl~H~~~~~~ 590 (667)
.....|||+|||.|.++.+|++... .+.+.-+ +..+..+-++ ++-=+-+|..+++| .. |+|.+..++.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~D~~~~~p---~~-D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-----PHVISEAPQFPGVTHVGGDMFKEVP---SG-DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-----HHHHHhhhhcCCeEEEeCCcCCCCC---CC-CEEEehHHhc
Confidence 4578999999999999999987321 2333222 2112111111 23233455555555 33 9999999998
Q ss_pred cccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 591 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 591 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.|.. -....+|-++=|.|+|||+++|.|
T Consensus 271 ~~~d----~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 271 DWSD----QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GSCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8852 123468999999999999999964
No 466
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.77 E-value=0.00023 Score=69.08 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=57.1
Q ss_pred eEEEeccccchhhhhhhhhcCCC-eEEEEeecCCCC-CchhhHhcc----cc--c-ccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILDR----GF--V-GVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~-vwvmnv~p~~~~-~~l~~~~~R----Gl--i-g~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|.+++.|.+...+ . +|+-+|-. ..+..+-++ |+ + -...|..+.++. +.+||+|.+..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-LAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG-GCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC-CCCeeEEEECC
Confidence 38999999999999999863211 1 23333433 444444333 32 1 122333344431 36899999987
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 624 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 624 (667)
.+.... -++-|+|+|||.+++.-..
T Consensus 155 ~~~~~~------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC------------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH------------HHHHHHcCCCcEEEEEECC
Confidence 766443 2788999999999987443
No 467
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.77 E-value=0.00036 Score=73.73 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=62.6
Q ss_pred ceeEEEeccccchhhhhhhhhcC--CCeEEEEeecCCCCCchhhHhc-ccccccccccccCCCCCCCccccccccCcccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~--~~vwvmnv~p~~~~~~l~~~~~-RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
...+|||+|||.|.++.+|.+.. ..+.+.-+ | ..+..+-+ .++-=+.+|..+++| . ||+|.+..++..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~p---~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTSIP---N-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTCCC---C-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCCCC---C-ccEEEeehhhcc
Confidence 45789999999999999998631 12333333 2 11111111 123223455555544 3 999999999988
Q ss_pred ccCCCCCCCcchhheeccccccC---CcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRP---EGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP---~G~~i~~d 622 (667)
+.. . ....+|-++-|+|+| ||+++|.|
T Consensus 259 ~~d--~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTD--K--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCH--H--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCH--H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 862 1 223689999999999 99999864
No 468
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.77 E-value=0.00029 Score=74.48 Aligned_cols=100 Identities=13% Similarity=0.105 Sum_probs=60.6
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccccccccccccCCCCCCCccccccccCccccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 592 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~~ 592 (667)
+|||+|||.|.++.+|.+..... +|+-+|.. .-+..+-+ .|+-..+ -+...++.-+.+||+|-++..|...
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSPKI---RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCTTC---BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSS
T ss_pred eEEEecCccCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccC
Confidence 69999999999999998642111 33334433 33333322 2332111 1222222225899999999887631
Q ss_pred cCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 593 SGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.. ...-....++-|+-|+|+|||.+++-.
T Consensus 275 ~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 275 MQ-TSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SH-HHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc-CCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 10 011234578999999999999999864
No 469
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.74 E-value=0.001 Score=68.12 Aligned_cols=111 Identities=17% Similarity=0.176 Sum_probs=65.7
Q ss_pred eEEEeccccchhhhhhhhhcCC--CeEEEEeecCCCCCchhhHhc----ccc---cccccccccCCCCCCCccccccccC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK--SVWVMNVVPTIGTNHLPMILD----RGF---VGVLHDWCEAFPTYPRTYDLVHAEG 587 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~--~vwvmnv~p~~~~~~l~~~~~----RGl---ig~~~~~c~~f~typ~tyDl~H~~~ 587 (667)
.+|||+|||.|+|+..|..... .|..+-+.| ..+..+-+ .|+ .-+..|..+ ++. +.+||+|-++.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~-~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRD-VEL-KDVADRVIMGY 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGG-CCC-TTCEEEEEECC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHH-cCc-cCCceEEEECC
Confidence 4799999999999999986322 333333322 22222211 232 212223322 232 57899997754
Q ss_pred ccccccCCCCCCCcchhheeccccccCCcEEEEEcCH------HHH-HHHHHHHhhCCCeeEE
Q 005959 588 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------RLI-ESARALTTRLKWDARV 643 (667)
Q Consensus 588 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------~~~-~~~~~~~~~~~W~~~~ 643 (667)
.. ....++.++-|+|+|||.+++.+.. +.. +.++.+.+.+.+++..
T Consensus 195 p~----------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (272)
T 3a27_A 195 VH----------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLID 247 (272)
T ss_dssp CS----------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEE
T ss_pred cc----------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEE
Confidence 33 3446888889999999999997442 233 4455556656555543
No 470
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.70 E-value=0.0045 Score=66.43 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=74.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C-------CCceEEeecccCCC-CCCCCccE
Q 005959 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-------LPAMIGSFASKQLP-YPSLSFDM 320 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~er----g-------l~~~~~~~da~~Lp-fpd~sFDl 320 (667)
++.+|||+-+|+|.=|.+|++.+ ....|+++|.++.-++..+++ + .++.+...|...++ ...+.||.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 34899999999999999998875 345799999998876554432 2 24556666666554 34578999
Q ss_pred EEe----cc---cccc--------cccC--------HHHHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 321 LHC----AR---CGVD--------WDQK--------DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 321 V~~----s~---~ll~--------~~~d--------~~~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
|++ +. ..+. +... ..++|....+.|||||+|+.++-....
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 995 32 1111 1100 125788899999999999999876543
No 471
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.66 E-value=0.00031 Score=66.21 Aligned_cols=96 Identities=14% Similarity=0.181 Sum_probs=56.4
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---cc-cccccccCCCCC---CCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTY---PRTYDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig-~~~~~c~~f~ty---p~tyDl~H 584 (667)
.+|||+|||.|.++.++++. +. -+|+-+|-. ..+..+-+ .|+ +- +..|+.+..+.. +.+||+|-
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~--~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSR--GM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHT--TC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEeCCccCHHHHHHHHc--CC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 48999999999999988763 21 133444433 33332222 232 11 223444432211 36899999
Q ss_pred ccCccccccCCCCCCCcchhheec--cccccCCcEEEEEcC
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDT 623 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d~ 623 (667)
++..|... ....++-++ -|+|+|||++++...
T Consensus 122 ~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAKQ-------EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp ECCCGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCch-------hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 98775421 123344445 899999999999643
No 472
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.65 E-value=0.00047 Score=69.04 Aligned_cols=106 Identities=11% Similarity=0.051 Sum_probs=62.2
Q ss_pred eEEEeccccchhhhhhhhhcC-CCeEEEEeecCCCC-CchhhHhc----c---cc-------------------------
Q 005959 517 RNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILD----R---GF------------------------- 562 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~-~~vwvmnv~p~~~~-~~l~~~~~----R---Gl------------------------- 562 (667)
..|||+|||.|.|+..|.+.- .+ ..+|+-+|-. ..+..+-+ . |+
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~--~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRS--LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGG--EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccC--CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 579999999999999987620 01 2355555543 33333321 1 32
Q ss_pred ---cc--------------cccccccCCCC----CCCccccccccCccccccCCCC---CCCcchhheeccccccCCcEE
Q 005959 563 ---VG--------------VLHDWCEAFPT----YPRTYDLVHAEGLLSLESGHRH---RCSTLDIFTEIDRILRPEGWV 618 (667)
Q Consensus 563 ---ig--------------~~~~~c~~f~t----yp~tyDl~H~~~~~~~~~~~~~---~c~~~~~l~E~dRiLRP~G~~ 618 (667)
+- ..+|..++++. -..+||+|-|+-.|.......+ .-....++-++-|+|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 11 22455444320 1248999999766543320000 122336788899999999999
Q ss_pred EEEcCH
Q 005959 619 IIRDTA 624 (667)
Q Consensus 619 i~~d~~ 624 (667)
++.+..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 996554
No 473
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.64 E-value=0.00049 Score=67.78 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=53.8
Q ss_pred EEEeccccchhhhhhhhhcCCCe---EEEEeecCCCC-CchhhHhcc----c--------ccccccccccCCCCCCCccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSV---WVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYD 581 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~v---wvmnv~p~~~~-~~l~~~~~R----G--------lig~~~~~c~~f~typ~tyD 581 (667)
.|||+|||.|.+++.|.+.-... ..-.|+-+|-. ..+..+-++ | +-=+..|..+.++. ..+||
T Consensus 87 ~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD 165 (227)
T 1r18_A 87 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPYN 165 (227)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSEE
T ss_pred EEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCcc
Confidence 79999999999999987621100 00022333332 333333222 1 11123344444432 26899
Q ss_pred cccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 582 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 582 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+|++...+. .++-++-|+|+|||.+++.-
T Consensus 166 ~I~~~~~~~------------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 166 AIHVGAAAP------------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEECSCBS------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEEECCchH------------HHHHHHHHHhcCCCEEEEEE
Confidence 999865543 24467889999999999863
No 474
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.61 E-value=0.00048 Score=72.93 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=62.1
Q ss_pred ceeEEEeccccchhhhhhhhhcCCC--eEEEEeecCCCCCchhhHhc-ccccccccccccCCCCCCCccccccccCcccc
Q 005959 515 MVRNVLDMNAHFGGFNSALLEKGKS--VWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 515 ~~R~vlDm~~~~g~faa~l~~~~~~--vwvmnv~p~~~~~~l~~~~~-RGlig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
...+|||+|||.|.++.+|.+.... +.+.-+ | ..+..+-+ .++--+-+|..+++| .||+|.+..++..
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 3579999999999999999874222 232222 2 11111111 123233455555444 3999999999988
Q ss_pred ccCCCCCCCcchhheeccccccC---CcEEEEEc
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRP---EGWVIIRD 622 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP---~G~~i~~d 622 (667)
+.. ..| ..+|-++-|+|+| ||.++|-|
T Consensus 264 ~~d--~~~--~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WND--EQS--LKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCH--HHH--HHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCH--HHH--HHHHHHHHHhCCCCCCCcEEEEEE
Confidence 762 222 3689999999999 99999853
No 475
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.60 E-value=0.0011 Score=68.05 Aligned_cols=99 Identities=11% Similarity=0.001 Sum_probs=61.9
Q ss_pred ceeEEEeccccc---hhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----c-ccccccccc------------cCC
Q 005959 515 MVRNVLDMNAHF---GGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G-FVGVLHDWC------------EAF 573 (667)
Q Consensus 515 ~~R~vlDm~~~~---g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----G-lig~~~~~c------------~~f 573 (667)
.++.|||+|||. |.+...+... .|= ..|+=+|-. ..|..+-++ + +-=+..|.. +.|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 478999999999 9887665431 111 134444442 333333222 1 111112222 123
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 574 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 574 ~typ~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+. .+||+|-+..+|..+. +. ....+|-|+-|+|+|||++++.+
T Consensus 154 d~--~~~d~v~~~~vlh~~~---d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLS---PD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CT--TSCCEEEETTTGGGSC---TT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CC--CCCEEEEEechhhhCC---cH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 32 4799999998888776 33 56789999999999999999975
No 476
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.59 E-value=0.0015 Score=69.28 Aligned_cols=139 Identities=9% Similarity=0.034 Sum_probs=88.4
Q ss_pred CCCceeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhhHhc---cc----ccccccccccCCCCCCCcccccc
Q 005959 512 PYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD---RG----FVGVLHDWCEAFPTYPRTYDLVH 584 (667)
Q Consensus 512 ~~~~~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~---RG----lig~~~~~c~~f~typ~tyDl~H 584 (667)
++...+.|+|+|||.|.++.+|++. .|=+. ++-.|-+..+..+-+ .+ +-=+-||.-+. -+..+|++.
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~-~p~~~--~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~---~~~~~D~~~ 249 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSL-YPGCK--ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD---PLPEADLYI 249 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHH-CSSCE--EEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS---CCCCCSEEE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHh-CCCce--eEeccCHHHHHHHHHhhhhcccCceeeecCccccC---CCCCceEEE
Confidence 4677899999999999999999974 44332 222333333332221 12 11123443221 123589999
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEEEcCH--------------------------HHHHHHHHHHhhCC
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------------------RLIESARALTTRLK 638 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------------------------~~~~~~~~~~~~~~ 638 (667)
+..++..|.. ..| ..||-++=|.|+|||.++|-|.. ...++.+++++.--
T Consensus 250 ~~~vlh~~~d--~~~--~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 250 LARVLHDWAD--GKC--SHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAG 325 (353)
T ss_dssp EESSGGGSCH--HHH--HHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred eeeecccCCH--HHH--HHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 9999998863 334 35899999999999999986531 11356677777777
Q ss_pred CeeEEeeeccCCCccEEEEEccc
Q 005959 639 WDARVIEIESNSDERLLICQKPF 661 (667)
Q Consensus 639 W~~~~~~~~~~~~~~~li~~K~~ 661 (667)
|+...+. ..++...+++++|.=
T Consensus 326 f~~v~v~-~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 326 FRDFQFK-KTGAIYDAILARKGT 347 (353)
T ss_dssp CEEEEEE-CCSSSCEEEEEECCC
T ss_pred CceEEEE-EcCCceEEEEEEecC
Confidence 8755442 234456789999863
No 477
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.54 E-value=0.00069 Score=65.92 Aligned_cols=97 Identities=9% Similarity=0.013 Sum_probs=57.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cc-cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.++..++... . -.|+-+|-. ..+..+-+ .|+ +- +..|..+..+.-+.+||+|-++..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~--~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRY--A--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTT--C--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CeEEEeCCCcCHHHHHHHhcC--C--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 479999999999999876532 1 145555554 44443332 233 11 223333323333478999988766
Q ss_pred cccccCCCCCCCcchhheec--cccccCCcEEEEEcCH
Q 005959 589 LSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTA 624 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d~~ 624 (667)
|.. -....++-++ -|+|+|||.+++....
T Consensus 132 ~~~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FRR-------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SST-------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCC-------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 431 1223455555 4679999999997554
No 478
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.54 E-value=0.0019 Score=63.74 Aligned_cols=130 Identities=14% Similarity=0.182 Sum_probs=68.5
Q ss_pred eEEEeccccchhhhhhhhhcC--CCeEEEEeecCCCCCchhhHhcc-----cccccccccccC---CCCCCCcccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILDR-----GFVGVLHDWCEA---FPTYPRTYDLVHAE 586 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~--~~vwvmnv~p~~~~~~l~~~~~R-----Glig~~~~~c~~---f~typ~tyDl~H~~ 586 (667)
.+|||+|||.|.++..|.+.- ..|..+-+.| ..+..+-++ .+.-+..|..++ ++ ++.+||+|..+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~D~v~~~ 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYAN-IVEKVDVIYED 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TSCCEEEEEEC
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccc-cCccEEEEEEe
Confidence 479999999999999998731 2233333332 222211111 122222333321 22 23689998631
Q ss_pred CccccccCCCCCCCcchhheeccccccCCcEEEEE----cCH------H-HHHHHHHHHhhCCCeeEEe-eeccC-CCcc
Q 005959 587 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR----DTA------R-LIESARALTTRLKWDARVI-EIESN-SDER 653 (667)
Q Consensus 587 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~----d~~------~-~~~~~~~~~~~~~W~~~~~-~~~~~-~~~~ 653 (667)
.. ..-....+|-++-|+|+|||++++. ... . .-++++ ++....++.... +.+.- .+.-
T Consensus 151 -----~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~ 221 (230)
T 1fbn_A 151 -----VA---QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHV 221 (230)
T ss_dssp -----CC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEE
T ss_pred -----cC---ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceE
Confidence 11 1111245789999999999999993 211 1 124555 555555654433 22221 2345
Q ss_pred EEEEEcc
Q 005959 654 LLICQKP 660 (667)
Q Consensus 654 ~li~~K~ 660 (667)
+++++|+
T Consensus 222 ~v~~~k~ 228 (230)
T 1fbn_A 222 MFVGIWE 228 (230)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 6777763
No 479
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.51 E-value=0.0022 Score=64.79 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=63.8
Q ss_pred EEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc-----c-cc----ccccccccC-CCCCCCccccccc
Q 005959 518 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----G-FV----GVLHDWCEA-FPTYPRTYDLVHA 585 (667)
Q Consensus 518 ~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R-----G-li----g~~~~~c~~-f~typ~tyDl~H~ 585 (667)
+|||+|||.|.++.+|...-.+- ..|+-+|-. ..+..+-++ | +. -+..|..+. ++ +.+||+|-+
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~--~~~~D~v~~ 177 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP--DGSVDRAVL 177 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC--TTCEEEEEE
T ss_pred EEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC--CCceeEEEE
Confidence 79999999999999998620010 134444543 444444333 3 11 122344332 22 378999987
Q ss_pred cCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhh-CCCe
Q 005959 586 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTR-LKWD 640 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~-~~W~ 640 (667)
+. - ....+|-++-|+|+|||++++... .+.+.++...... ..|.
T Consensus 178 ~~-~----------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 178 DM-L----------APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp ES-S----------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred CC-c----------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 21 1 223588999999999999998653 3444444443333 4553
No 480
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.51 E-value=0.0085 Score=61.31 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=58.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-CCc--eeEEEEecCCHHHHHHHHH-cCCCc-eEEee-cccCCCCCCCCccEEEeccc
Q 005959 253 GVRTILDIGCGYGSFGAHLFSK-ELL--TMCIANYEASGSQVQLTLE-RGLPA-MIGSF-ASKQLPYPSLSFDMLHCARC 326 (667)
Q Consensus 253 ~~~~VLDIGCGtG~~t~~La~~-g~~--~~sV~gvD~S~~ml~~A~e-rgl~~-~~~~~-da~~Lpfpd~sFDlV~~s~~ 326 (667)
+..+|||+||++|.++.+.++. ++. ...+.++|.. +...... .|.++ .+.++ |...+ +...+|+|+|-.+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~--~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDMA 148 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGH--EEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLCDIG 148 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTS--CCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEECCC
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccc--cCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEeCCC
Confidence 3489999999999999999886 111 1223444521 0000000 12222 22334 66553 3558999999754
Q ss_pred ccccccC----HH---HHHHHHHhcccCCe-EEEEEeCCC
Q 005959 327 GVDWDQK----DG---ILLLEVDRVLKPGG-YFVWTSPLT 358 (667)
Q Consensus 327 ll~~~~d----~~---~~L~Ei~RvLKPGG-~Lvis~p~~ 358 (667)
-. ... .. .+|.-+.++|+||| .|++-.+..
T Consensus 149 -Pn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 149 -ES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp -CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred -CC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 22 211 11 24655668999999 999988763
No 481
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.49 E-value=0.0026 Score=66.35 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=70.3
Q ss_pred eEEEeccc------cchh-hhhhhhhcCCCeEEEEeecCCCCCchhhHhcccccc-cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNA------HFGG-FNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVG-VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~------~~g~-faa~l~~~~~~vwvmnv~p~~~~~~l~~~~~RGlig-~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
..|||+|| |.|+ .+|.+...+..|.-+-+.|. + + ++-= +..|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 36999999 4476 23333321123444444443 1 1 2222 45566542 2 2478999998643
Q ss_pred ccc---c--cCCCCCCCcchhheeccccccCCcEEEEEcC-HHHHHHHHHHHhhCCC-eeEEeeeccCCCccEEEEEc
Q 005959 589 LSL---E--SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKW-DARVIEIESNSDERLLICQK 659 (667)
Q Consensus 589 ~~~---~--~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W-~~~~~~~~~~~~~~~li~~K 659 (667)
... + ...+..-.+..+|-|+-|+|||||.|++..- ....+++.++++...+ .+...-....+.|-+++++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 211 0 0000111123678899999999999998541 1223466667776644 44444222334577777764
No 482
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.45 E-value=0.00063 Score=66.69 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=53.9
Q ss_pred eEEEeccccchhhhhhhhhcCC----CeEEEEeecCCCC-CchhhHhcc----cc-------c-ccccccccCCC---CC
Q 005959 517 RNVLDMNAHFGGFNSALLEKGK----SVWVMNVVPTIGT-NHLPMILDR----GF-------V-GVLHDWCEAFP---TY 576 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~----~vwvmnv~p~~~~-~~l~~~~~R----Gl-------i-g~~~~~c~~f~---ty 576 (667)
.+|||+|||.|.+++.|.+... +-. +|+-+|-. ..+..+-++ |+ + -+..|..+.++ .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 4899999999999999986322 100 23333332 333333322 31 1 12223333220 11
Q ss_pred CCccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 577 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 577 p~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
+.+||+|++...+. .++-++-|+|+|||.+++.-
T Consensus 160 ~~~fD~I~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS------------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS------------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 36799999865543 25567889999999999863
No 483
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.40 E-value=0.00059 Score=67.64 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=54.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccc---cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG---VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig---~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
.+|||+|||.|.+++.|.+.. + .+|+-+|-. ..+..+-++ |+-. +..|...+++. ...||+|.++..
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~-~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIV-K---TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTAG 167 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHH-C---SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECSB
T ss_pred CEEEEEeCCcCHHHHHHHHHh-C---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEECCc
Confidence 479999999999999998732 1 133333432 333333332 3211 22333334432 124999998766
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
+.... -++-|+|+|||.+++.-.
T Consensus 168 ~~~~~------------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 168 APKIP------------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp BSSCC------------HHHHHTEEEEEEEEEEEC
T ss_pred HHHHH------------HHHHHhcCCCcEEEEEEe
Confidence 54332 367899999999998644
No 484
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.38 E-value=0.0007 Score=70.68 Aligned_cols=93 Identities=16% Similarity=0.054 Sum_probs=57.7
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccc---cccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG---VLHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig---~~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
..|||+|||.|.++..|.+.... .-+|+-+|-. ..+..+-++ |+-. +..|..+..+ -+.+||+|.+...
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGE--KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVG 153 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSB
T ss_pred CEEEEecCCchHHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCC
Confidence 37999999999999999863222 0013333333 455444443 5421 2234433222 2368999999877
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEEEcCH
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 624 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 624 (667)
+.... -++-|+|+|||.+++....
T Consensus 154 ~~~~~------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 154 VDEVP------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BSCCC------------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHHH------------HHHHHhcCCCcEEEEEECC
Confidence 75432 3677899999999997543
No 485
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.37 E-value=0.0037 Score=65.49 Aligned_cols=93 Identities=17% Similarity=0.120 Sum_probs=51.4
Q ss_pred eEEEeccccchhhhhhhhhc-CCCeEEEEeecCCCC-CchhhHhcc------------------cccccccccccCCCCC
Q 005959 517 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR------------------GFVGVLHDWCEAFPTY 576 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~-~~~vwvmnv~p~~~~-~~l~~~~~R------------------Glig~~~~~c~~f~ty 576 (667)
.+|||+|||.|.++.+|... +... .|+-+|-. ..+..+-++ .+-=+..|..+....+
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQG---RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCc---eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 47999999999999999863 1101 12222332 233333221 1111223444432223
Q ss_pred C-CccccccccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC
Q 005959 577 P-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 623 (667)
Q Consensus 577 p-~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 623 (667)
+ .+||+|.++. ... ..++-++-|+|+|||.+++...
T Consensus 184 ~~~~fD~V~~~~-~~~----------~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDM-LNP----------HVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECS-SST----------TTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECC-CCH----------HHHHHHHHHhcCCCcEEEEEeC
Confidence 3 5899998732 111 2377889999999999998643
No 486
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.36 E-value=0.0049 Score=59.21 Aligned_cols=116 Identities=9% Similarity=0.054 Sum_probs=70.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cccccccccccCCCCCCCccccccccCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 591 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Glig~~~~~c~~f~typ~tyDl~H~~~~~~~ 591 (667)
.+|||+|||.|.|+.+|...+.. +|+-+|-. ..+..+-++ |+ . ..-.+..+..+|.+||+|-++..|..
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK----EVICVEVDKEAVDVLIENLGEFKG-K-FKVFIGDVSEFNSRVDIVIMNPPFGS 124 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHTGGGTT-S-EEEEESCGGGCCCCCSEEEECCCCSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHHHHHcCC-C-EEEEECchHHcCCCCCEEEEcCCCcc
Confidence 47999999999999999873211 23444433 333333322 32 1 11112222224568999999887765
Q ss_pred ccCCCCCCCcchhheeccccccCCcEEEEE-cCHHHHHHHHHHHhhCCCeeEEe
Q 005959 592 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 644 (667)
Q Consensus 592 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 644 (667)
.. . -....++-++-|+| ||.+++. ......+.+.+++....|++...
T Consensus 125 ~~---~-~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 125 QR---K-HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SS---T-TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred cc---C-CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 54 2 12235666777777 6655554 36777788888888887876654
No 487
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.33 E-value=0.0018 Score=67.77 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=64.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc--cccc-cccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl--ig~~-~~~c~~f~typ~tyDl~H~~~~ 588 (667)
..|||+|||.|+++.+|.+.-.+- -.|+-.|-. ..+..+-++ |+ +-+. +|. +.++.++.+||+|-++--
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeCC
Confidence 379999999999999998631110 124444544 444444333 44 1122 222 223334578999997533
Q ss_pred cccccCCCCC---------CC-------cchhheeccccccCCcEEEEEcC----HHHHHHHHHHHhhCCCe
Q 005959 589 LSLESGHRHR---------CS-------TLDIFTEIDRILRPEGWVIIRDT----ARLIESARALTTRLKWD 640 (667)
Q Consensus 589 ~~~~~~~~~~---------c~-------~~~~l~E~dRiLRP~G~~i~~d~----~~~~~~~~~~~~~~~W~ 640 (667)
.|....-++. .. -..+|-++-|+|+|||.+++..- .+.-+.++.+++...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 2211000000 00 03678889999999999999521 22233445555554443
No 488
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.25 E-value=0.0012 Score=73.44 Aligned_cols=94 Identities=14% Similarity=0.174 Sum_probs=58.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCCCchhh----Hhcccc---ccc-ccccccCCCCCCCccccccccCc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGV-LHDWCEAFPTYPRTYDLVHAEGL 588 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~~~l~~----~~~RGl---ig~-~~~~c~~f~typ~tyDl~H~~~~ 588 (667)
..|||+|||.|.++..|.+. +. ..|+-+|....+.. +.+.|+ |-+ ..|+.+ + .+|..||+|-+..+
T Consensus 160 ~~VLDiGcGtG~la~~la~~--~~--~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQA--GA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHT--TC--SEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHc--CC--CEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCc
Confidence 58999999999999988863 21 12233332222222 233354 222 233433 2 24578999999877
Q ss_pred cccccCCCCCCCcchhheeccccccCCcEEEE
Q 005959 589 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 589 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
+..+. . -.+...+.++-|+|+|||++++
T Consensus 234 ~~~~~---~-e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLF---N-ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHT---C-HHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcC---c-HHHHHHHHHHHHhcCCCCEEEE
Confidence 65543 1 2344677799999999999985
No 489
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.19 E-value=0.012 Score=61.14 Aligned_cols=55 Identities=7% Similarity=0.100 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH
Q 005959 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE 296 (667)
Q Consensus 231 ~~y~~~l~~~L~l~~g~~l~~~~~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~A~e 296 (667)
.-+.+++.+.+...++ ..+||.+||.|..+..++++ ...|+|+|.++.+++.|++
T Consensus 8 pVLl~e~le~L~~~~g--------g~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPG--------GVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTHHHHHHHHTCCTT--------CEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH
T ss_pred hHHHHHHHHhhCCCCC--------CEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh
Confidence 4455666677665444 79999999999999999997 3469999999999999876
No 490
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.19 E-value=0.004 Score=64.60 Aligned_cols=141 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------cc----cc-cccccccCCCCCCCcccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPTYPRTYDLVH 584 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------Gl----ig-~~~~~c~~f~typ~tyDl~H 584 (667)
++|||+|||.|+++..|++. .++ .+|+-+|-. .-+.++-++ |+ +- +..|..+..+..+.+||+|-
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~-~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKH-DSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTS-TTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhc-CCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 68999999999999999862 232 233333332 222222211 11 11 12232222233357899999
Q ss_pred ccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-----HHHHHHHHHHHhhCCCeeEEeeec----cCCCccEE
Q 005959 585 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE----SNSDERLL 655 (667)
Q Consensus 585 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~~----~~~~~~~l 655 (667)
++. +..+.+....-....++-++-|+|+|||.+++... .+....+.+..++.--.+...... .++...++
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEE
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEE
Confidence 753 22211000001124677889999999999999722 233444433333333333333211 12345678
Q ss_pred EEEccc
Q 005959 656 ICQKPF 661 (667)
Q Consensus 656 i~~K~~ 661 (667)
++.|.+
T Consensus 248 ~as~~~ 253 (296)
T 1inl_A 248 FASKGI 253 (296)
T ss_dssp EEESSC
T ss_pred EecCCC
Confidence 888863
No 491
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.17 E-value=0.0018 Score=75.99 Aligned_cols=99 Identities=10% Similarity=0.130 Sum_probs=62.9
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----------ccc--cccccccccCCCCCCCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----------RGF--VGVLHDWCEAFPTYPRTYDLV 583 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----------RGl--ig~~~~~c~~f~typ~tyDl~ 583 (667)
..|||+|||.|.++.+|.+...+. -.|+-+|-. ..+..+-+ .|+ |-+++.=-+.++..+.+||+|
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~--a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSL--QTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCC--CEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC--CeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 579999999999999998742111 133444443 44444433 243 222221123355545899999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEc
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 622 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 622 (667)
.|..++.+.. + -....++-|+-|+|||| ++|+..
T Consensus 801 V~~eVLeHL~---d-p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 801 TCLEVIEHME---E-DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEESCGGGSC---H-HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEeCchhhCC---h-HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999988765 1 12234778999999999 777753
No 492
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.12 E-value=0.0018 Score=66.37 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=57.5
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCC-C-CchhhHhc---------ccc-------c-ccccccccCCCCC-
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG-T-NHLPMILD---------RGF-------V-GVLHDWCEAFPTY- 576 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~-~-~~l~~~~~---------RGl-------i-g~~~~~c~~f~ty- 576 (667)
.+|||+|||.|.++.+|...+. -.|+-+|- . ..+..+-+ .|+ + -...+|.......
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~----~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA----DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC----SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 4799999999999988876322 13344444 2 33333222 222 2 1225676643222
Q ss_pred ----CCccccccccCccccccCCCCCCCcchhheecccccc---C--CcEEEE
Q 005959 577 ----PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILR---P--EGWVII 620 (667)
Q Consensus 577 ----p~tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLR---P--~G~~i~ 620 (667)
+.+||+|-++.++-.. -....++-++.|+|+ | ||.+++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~------~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH------QAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG------GGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hhccCCCCCEEEEeCcccCh------HHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 3789999887765432 234578889999999 9 996544
No 493
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.10 E-value=0.055 Score=54.77 Aligned_cols=101 Identities=19% Similarity=0.153 Sum_probs=66.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH---HHHcCC-CceEEee-cccCCCCCCCCccEEEeccccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL---TLERGL-PAMIGSF-ASKQLPYPSLSFDMLHCARCGV 328 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~g~~~~sV~gvD~S~~ml~~---A~ergl-~~~~~~~-da~~Lpfpd~sFDlV~~s~~ll 328 (667)
..+||||||++|.++.+.+... ....|.++|....--+. .+..|- .+.+.+. |...++- ..+|+|+|-.. .
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIg-e 154 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIG-E 154 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCC-C
T ss_pred CCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccccEEEEecC-C
Confidence 3699999999999999887763 35579999987532210 011122 2445655 6555543 57999999754 2
Q ss_pred ccccCH----H---HHHHHHHhcccCCeEEEEEeCCCCh
Q 005959 329 DWDQKD----G---ILLLEVDRVLKPGGYFVWTSPLTNP 360 (667)
Q Consensus 329 ~~~~d~----~---~~L~Ei~RvLKPGG~Lvis~p~~~~ 360 (667)
-.+++ . ++|.-+.+.|++ |-|++-.+.+..
T Consensus 155 -Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 155 -SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp -CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred -CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 22222 1 256666889999 788888887655
No 494
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.09 E-value=0.00091 Score=66.87 Aligned_cols=101 Identities=12% Similarity=0.042 Sum_probs=49.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc---ccccc-c----cccCCCCC-CCcccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGVLH-D----WCEAFPTY-PRTYDL 582 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl---ig~~~-~----~c~~f~ty-p~tyDl 582 (667)
..|||+|||.|.++.+|...... ..|+-+|-. ..+..+-+ .|+ +-+++ | +-++++.. +.+||+
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNG---WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CEEEEeCCChhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 47999999999999888752101 234444443 33433322 243 22222 2 22344322 158999
Q ss_pred ccccCcccccc---C-C--C---CCCCcchhheeccccccCCcEEEE
Q 005959 583 VHAEGLLSLES---G-H--R---HRCSTLDIFTEIDRILRPEGWVII 620 (667)
Q Consensus 583 ~H~~~~~~~~~---~-~--~---~~c~~~~~l~E~dRiLRP~G~~i~ 620 (667)
|-++-.|.... . . + ....-..++-++-|+|+|||.+.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99975543221 0 0 0 001112345678888888776654
No 495
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.00 E-value=0.0041 Score=64.70 Aligned_cols=139 Identities=16% Similarity=0.158 Sum_probs=73.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------cc----cc-cccccccCCCC-CCCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPT-YPRTYDLV 583 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------Gl----ig-~~~~~c~~f~t-yp~tyDl~ 583 (667)
++|||+|||.|+++..|++. .++- +|+-+|-. .-+.++-++ ++ +- +..|..+-... -+.+||+|
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~-~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRH-GTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTC-TTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhC-CCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 68999999999999999862 2221 23333322 222222211 11 11 12232221111 24789999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-----HHHHHHHHHHHhhCCCeeE-Eeeec--c--CCCcc
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDAR-VIEIE--S--NSDER 653 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~-~~~~~--~--~~~~~ 653 (667)
-++........ ..---..++-++-|+|+|||.+++... ....+++.+.++..-+... ..... + ++.-.
T Consensus 174 i~d~~~~~~~~--~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 174 IIDTTDPAGPA--SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EECCCCccccc--hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 98644322110 111114678899999999999999632 2456666666666655433 33211 1 22345
Q ss_pred EEEEEcc
Q 005959 654 LLICQKP 660 (667)
Q Consensus 654 ~li~~K~ 660 (667)
++++.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 7888875
No 496
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.97 E-value=0.0026 Score=68.21 Aligned_cols=121 Identities=17% Similarity=0.187 Sum_probs=70.3
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhc----ccc--cccc-cccccCCCCC---CCccccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVL-HDWCEAFPTY---PRTYDLVHA 585 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~~-~~~c~~f~ty---p~tyDl~H~ 585 (667)
.+|||+|||.|+|+.+|... .-+|+-+|.. ..+..+-+ .|+ +-++ .|..+.++.. +.+||+|.+
T Consensus 211 ~~VLDlg~G~G~~~~~la~~-----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG-----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH-----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeeccCHHHHHHHHh-----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 57999999999999999862 3455555554 34433332 233 1111 1221211111 468999998
Q ss_pred cCccccccCCCCC------CCcchhheeccccccCCcEEEEEcCH------HHHHHHHHHHhhCCCeeEEee
Q 005959 586 EGLLSLESGHRHR------CSTLDIFTEIDRILRPEGWVIIRDTA------RLIESARALTTRLKWDARVIE 645 (667)
Q Consensus 586 ~~~~~~~~~~~~~------c~~~~~l~E~dRiLRP~G~~i~~d~~------~~~~~~~~~~~~~~W~~~~~~ 645 (667)
+--..... .. -....++.++-|+|+|||++++.... ...+.+++.+.....+..+.+
T Consensus 286 dpP~~~~~---~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 286 DPPAFAKG---KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp CCCCSCCS---TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCC---hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 64321111 00 12336888999999999999997432 234555556666665555543
No 497
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.97 E-value=0.0099 Score=60.95 Aligned_cols=141 Identities=14% Similarity=0.132 Sum_probs=74.1
Q ss_pred eeEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc------cc----ccc-ccccccCCCCCCCccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GF----VGV-LHDWCEAFPTYPRTYDLV 583 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R------Gl----ig~-~~~~c~~f~typ~tyDl~ 583 (667)
-++|||+|||.|+++..++.. .++- .|+-+|-. .-+.++-+. ++ +-+ ..|-.+-.+..+.+||+|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKH-PSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTC-TTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCEEEEECCchHHHHHHHHhC-CCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 478999999999999999862 2332 22222221 222222111 11 111 112111122235789999
Q ss_pred cccCccccccCCCCCCCcchhheeccccccCCcEEEEEcC-----HHHHHHHHHHHhhCCCeeEEeeec--c--CCCccE
Q 005959 584 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE--S--NSDERL 654 (667)
Q Consensus 584 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~~--~--~~~~~~ 654 (667)
-++.. ..+.. ...--...++-++-|+|+|||.+++... .+.+..+.+..++.=-.+...... . ++.-.+
T Consensus 153 i~d~~-~~~~~-~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~ 230 (275)
T 1iy9_A 153 MVDST-EPVGP-AVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTF 230 (275)
T ss_dssp EESCS-SCCSC-CCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEE
T ss_pred EECCC-CCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEE
Confidence 98543 22210 0111124678899999999999999732 344555555444443334433211 1 224567
Q ss_pred EEEEccc
Q 005959 655 LICQKPF 661 (667)
Q Consensus 655 li~~K~~ 661 (667)
+++.|.+
T Consensus 231 ~~ask~~ 237 (275)
T 1iy9_A 231 TIGSKKY 237 (275)
T ss_dssp EEEESSC
T ss_pred EEeeCCC
Confidence 8888863
No 498
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.96 E-value=0.0021 Score=68.02 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=67.6
Q ss_pred eEEEeccccchhhhhhhhhcCCCeEEEEeecCCCC-CchhhHhcc----cc----cccc-cccccCCCCC---CCccccc
Q 005959 517 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVL-HDWCEAFPTY---PRTYDLV 583 (667)
Q Consensus 517 R~vlDm~~~~g~faa~l~~~~~~vwvmnv~p~~~~-~~l~~~~~R----Gl----ig~~-~~~c~~f~ty---p~tyDl~ 583 (667)
..|||+|||.|+|+.++... .. .|+-+|.. ..+..+-++ |+ +-++ .|..+..+.. ..+||+|
T Consensus 155 ~~VLDlgcGtG~~sl~la~~--ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA--GA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT--TC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CcEEEcccccCHHHHHHHHc--CC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 47999999999999999873 22 45666654 444433322 33 1122 2222211111 3579999
Q ss_pred cccCc-cccccCC---CCCCCcchhheeccccccCCcEEEEEc------CH-HHHHHHHHHHhhCCCeeEE
Q 005959 584 HAEGL-LSLESGH---RHRCSTLDIFTEIDRILRPEGWVIIRD------TA-RLIESARALTTRLKWDARV 643 (667)
Q Consensus 584 H~~~~-~~~~~~~---~~~c~~~~~l~E~dRiLRP~G~~i~~d------~~-~~~~~~~~~~~~~~W~~~~ 643 (667)
-++-- |...... ...-....++-++-|+|+|||++++.. +. ...+.+++.+.....++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~ 300 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVAS 300 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 87543 2211000 000123468888999999999977742 12 3344445566666666553
No 499
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.96 E-value=0.0019 Score=84.76 Aligned_cols=103 Identities=13% Similarity=0.208 Sum_probs=49.5
Q ss_pred CCEEEEeCCCCchHHHHHhhc----CCceeEEEEecCCHHHHHHHHHcC--CCceEEeecccC-CCCCCCCccEEEeccc
Q 005959 254 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQ-LPYPSLSFDMLHCARC 326 (667)
Q Consensus 254 ~~~VLDIGCGtG~~t~~La~~----g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da~~-Lpfpd~sFDlV~~s~~ 326 (667)
..+|||||.|+|..+..+.+. .....+++-.|+|+...+.|+++. +.+.....+... .++..++||+|+++.+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 469999999999876654432 112356788899877665555441 112221123222 2445678999999987
Q ss_pred ccccccCHHHHHHHHHhcccCCeEEEEEeCC
Q 005959 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (667)
Q Consensus 327 ll~~~~d~~~~L~Ei~RvLKPGG~Lvis~p~ 357 (667)
+|-..+....|.+++++|||||++++.+..
T Consensus 1321 -l~~t~~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1321 -LATLGDPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp ---------------------CCEEEEEEC-
T ss_pred -ccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 676677788999999999999999987643
No 500
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.94 E-value=0.0052 Score=64.99 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=72.4
Q ss_pred eeEEEeccccchhhhhhhhhcC---CCeEEEEeecCCCC-CchhhHhc----ccc--cccccccccCCCCCCCccccccc
Q 005959 516 VRNVLDMNAHFGGFNSALLEKG---KSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPTYPRTYDLVHA 585 (667)
Q Consensus 516 ~R~vlDm~~~~g~faa~l~~~~---~~vwvmnv~p~~~~-~~l~~~~~----RGl--ig~~~~~c~~f~typ~tyDl~H~ 585 (667)
-..|||+|||.|+|+..+.... ..|. -.|-. ..+..+-+ .|+ |-+.+.=.+.++.....||+|-+
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~-----g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVY-----AGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEE-----EEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEE-----EEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEE
Confidence 3579999999999987776521 2232 33332 33333322 343 22221111223322356899999
Q ss_pred cCccccccCCCCCCC----cchhheeccccccCCcEEEEEcCHHHHHHHHHHHhhCCCeeEEee-eccCC-CccEEEEEc
Q 005959 586 EGLLSLESGHRHRCS----TLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIE-IESNS-DERLLICQK 659 (667)
Q Consensus 586 ~~~~~~~~~~~~~c~----~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~-~~~~~-~~~~li~~K 659 (667)
+--|..-.. ..-. ...++-++-|+|+|||.+++-..... -++.+.+ ..|+..... ..++. .-.+.+++|
T Consensus 279 npPyg~r~~--~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 279 NPPHGLRLG--RKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp CCCSCC------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBCCEEEEEEE
T ss_pred CCCCcCccC--CcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEEEEEEEEEc
Confidence 765532110 1111 14678899999999999988644332 2445555 777765432 22344 345666665
Done!