BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005962
(667 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/623 (44%), Positives = 388/623 (62%), Gaps = 15/623 (2%)
Query: 50 DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIID---TDLGFPYF 106
DP SE + YVPRDE F +K F + S+ H ++P ++AI T F F
Sbjct: 252 DPNSEKPGEV-YVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESF 310
Query: 107 TTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWF 166
+ L+ G+ +P + + LP L + G+ VL+F P K
Sbjct: 311 EDVRSLYEGGIKLPT-----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVM 365
Query: 167 RDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEA 226
DEEF R+ +AG+NP IR + E+P +STLDP +YG S ITKE +E +GG+ TVEEA
Sbjct: 366 TDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGV-TVEEA 424
Query: 227 IKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGK 286
+ ++LFILDY D +PY+ ++ L Y +RT+ F GTL+PLAIEL++P DG
Sbjct: 425 LSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGD 484
Query: 287 PQWKQ--VFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
+ V P+ + +W LAKAHV+ +DSGYHQLVSHWL TH EP+ IATNR L
Sbjct: 485 NLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHL 544
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
S +HPI +LL PH+R T+ IN LAR++L+NA GIIE +F PGKYS+E+SS Y K+W F
Sbjct: 545 SVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFT 603
Query: 405 HEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPS 464
H+ALP DL+ RG+A+EDPSAP G++L IEDYP+A DGL++WDA+K WV ++V+ YYP +
Sbjct: 604 HQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDA 663
Query: 465 SVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQ 524
+V+ D EL++WW E GH D K++PWWP +T EDLI + I W AS HAAVNFGQ
Sbjct: 664 AVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQ 723
Query: 525 YTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLS 584
Y +GG NRPT+AR +P E + D ++ P+ L+ + + +++++ LS
Sbjct: 724 YPYGGLILNRPTLARRFIPAEGTPEYDE--MVKNPQKAYLRTITPKFETLIDLSVIEILS 781
Query: 585 SHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVP 644
H+ DE YLG++ W D AF+RF +L +EG I+ RN++ +L+NRTG +P
Sbjct: 782 RHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLP 841
Query: 645 YELMKPFSEPGVTGQGVPYSISI 667
Y L+ SE G+T +G+P SISI
Sbjct: 842 YTLLHRSSEEGLTFKGIPNSISI 864
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 532 bits (1371), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/623 (44%), Positives = 393/623 (63%), Gaps = 15/623 (2%)
Query: 50 DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDT--DLGFPYFT 107
DP SE Y+PRDEAF +K F A + SV ++P L A L F F
Sbjct: 241 DPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFA 300
Query: 108 TIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFR 167
+ KL+ GV +P F T +P + + G++ L++ P+ M DK W
Sbjct: 301 EVRKLYEGGVT--LPTNFLSNI---TPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMT 355
Query: 168 DEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAI 227
DEEF R+T+AGLNP I+++ E+PL S LD + YG ITKE +E +GG +TVE+AI
Sbjct: 356 DEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGG-LTVEQAI 414
Query: 228 KQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKP 287
+ KKLFILD+HD L+PY+ K+ T Y +RT+FF GTL PLAIEL++P G+
Sbjct: 415 QNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEE 473
Query: 288 QW--KQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLS 345
+V+ PS E ++W LAKA+V+ +D+ YHQ++SHWL TH EP++IATNR LS
Sbjct: 474 YGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLS 533
Query: 346 AMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDH 405
+HPI +LL PH+R TM IN+LAR++LVNA GIIE TF G+YS+E+S+V Y K W F
Sbjct: 534 VVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIY-KDWVFTD 592
Query: 406 EALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSS 465
+ALP DL+ RG+AV+DPSAP G++L IEDYP+A DGL++WDA+K WV ++V+ YY +
Sbjct: 593 QALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSDEE 652
Query: 466 VESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQY 525
++ D EL++WW E+ VGH D KD+PWW ++T E+L++ T+ W+AS HAAVNFGQY
Sbjct: 653 LQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQY 712
Query: 526 TFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSS 585
+GG NRPT++R MP + ++ + PE L+ + + + I++ LS
Sbjct: 713 PYGGLILNRPTISRRFMP--EKGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSR 770
Query: 586 HSPDEEYLGKQ-MEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVP 644
H+ DE YLG++ W D AF+RF L+E+E + E+N +E L+NR G +P
Sbjct: 771 HASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMP 830
Query: 645 YELMKPFSEPGVTGQGVPYSISI 667
Y L+ P SE G+T +G+P SISI
Sbjct: 831 YTLLYPSSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 530 bits (1366), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/625 (44%), Positives = 389/625 (62%), Gaps = 20/625 (3%)
Query: 50 DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFP----- 104
DP SESR+ Y+PRDEAF +K F L SV ++P L++A DL F
Sbjct: 246 DPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFD 302
Query: 105 YFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFF 164
F + L++ G+ +P K L P L + G++ L+F P+ + K
Sbjct: 303 SFDEVHGLYSGGIKLPTDIISKISPL-----PVLKEIFRTDGEQALKFPPPKVIQVSKSA 357
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W DEEF R+ LAG+NP IR + ++P RS LD ++YG S ITKE +E + G +TV+
Sbjct: 358 WMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVD 416
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELT--RPP 282
EAI+ K+LF+LD+HD ++PY+ ++ T Y +RT+ F GTLRPLAIEL+ P
Sbjct: 417 EAIQNKRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQ 475
Query: 283 MDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNR 342
D + QVF P+ E +W LAKA+V+ +DS YHQLVSHWL TH EP+IIATNR
Sbjct: 476 GDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNR 535
Query: 343 QLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWR 402
LS +HPI +LL PH+R TM IN LAR +LVN GG+IE TF G+YS+E+S+V Y K W
Sbjct: 536 HLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWV 594
Query: 403 FDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
F +ALP DLI RGMA+EDPS P GI+L IEDYP+ DGL++WDA+K WV ++V YY +
Sbjct: 595 FTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKS 654
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
++ D EL++ W E+ VGH DKK+EPWWP ++T E+L++ I W AS HAAVNF
Sbjct: 655 DDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNF 714
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQY +GG NRPT++R MP + +++ + P+ L+ + Q +++++
Sbjct: 715 GQYPYGGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEI 772
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGM 642
LS H+ DE YLG++ W D AF+RF +L ++E + ERN +E L+NR G
Sbjct: 773 LSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQ 832
Query: 643 VPYELMKPFSEPGVTGQGVPYSISI 667
+PY L+ P S+ G+T +G+P SISI
Sbjct: 833 MPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/625 (44%), Positives = 387/625 (61%), Gaps = 20/625 (3%)
Query: 50 DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFP----- 104
DP SESR+ Y+PRDEAF +K F L SV ++P L++A DL F
Sbjct: 246 DPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFD 302
Query: 105 YFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFF 164
F + L++ G+ +P K L P L + G++ L+F P+ + K
Sbjct: 303 SFDEVHGLYSGGIKLPTDIISKISPL-----PVLKEIFRTDGEQALKFPPPKVIQVSKSA 357
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W DEEF R+ LAG+NP IR + ++P RS LD ++YG S ITKE +E + G +TV+
Sbjct: 358 WMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVD 416
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELT--RPP 282
EAI+ K+LF+LD+HD ++PY+ ++ T Y +RT+ F GTLRPLAIEL+ P
Sbjct: 417 EAIQNKRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQ 475
Query: 283 MDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNR 342
D + QVF P+ E +W LAKA+V+ +DS YHQLVSH L TH EP+IIATNR
Sbjct: 476 GDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNR 535
Query: 343 QLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWR 402
LS +HPI +LL PH+R TM IN LAR + VN GG+IE TF G+YS+E+S+V Y K W
Sbjct: 536 HLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWV 594
Query: 403 FDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
F +ALP DLI RGMA+EDPS P GI+L IEDYP+ DGL++WDA+K WV ++V YY +
Sbjct: 595 FTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKS 654
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
++ D EL++ W E+ VGH DKK+EPWWP ++T E+L++ I W AS HAAVNF
Sbjct: 655 DDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNF 714
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQY +GG NRPT++R MP + +++ + P+ L+ + Q +++++
Sbjct: 715 GQYPYGGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEI 772
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGM 642
LS H+ DE YLG++ W D AF+RF +L ++E + ERN +E L+NR G
Sbjct: 773 LSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQ 832
Query: 643 VPYELMKPFSEPGVTGQGVPYSISI 667
+PY L+ P S+ G+T +G+P SISI
Sbjct: 833 MPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GI+E+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIVETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GI+E+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGILETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFG+Y +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGEYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YH+L+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 389/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GI E+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 389/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFG Y +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGNYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 390/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AV+FGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVHFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/630 (41%), Positives = 389/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ + G
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YH L+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 504 bits (1298), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/630 (41%), Positives = 388/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ +
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG--- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GIIE+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AV FGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVGFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/630 (41%), Positives = 388/630 (61%), Gaps = 26/630 (4%)
Query: 48 IADPASESRTLINYVPRDEAFSEIKQ---LQFSAKTLYSVLHGLVPSLETA--IIDTDLG 102
+ DP +E + + YVPRDE +K L+ K+L ++ P+ E+A + T +
Sbjct: 226 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQ---PAFESAFDLKSTPIE 282
Query: 103 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPR-LVKGIEDT-GKEVLRFETPETMDR 160
F F + L+ G+ +P + + TI+P ++K + T G+ +L+F P +
Sbjct: 283 FHSFQDVHDLYEGGIKLP-------RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQV 335
Query: 161 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 220
+ W DEEF R+ +AG+NP IR + E+P +S LDP IYG S IT + ++ +
Sbjct: 336 SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG--- 392
Query: 221 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 280
T++EA+ ++LF+LDYHD+ +PYV ++ +L Y +RT+ F GTL+P+AIEL+
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSL 452
Query: 281 PPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
P G QV P+ E +W LAKA+V+ +DS YHQL+SHWL TH EP++I
Sbjct: 453 PHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI 512
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYD 398
AT+R LS +HPI +LL PH+R M INALAR++L+NA GI E+TF P KYS+E+SS Y
Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIGETTFLPSKYSVEMSSAVY- 571
Query: 399 KHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNH 458
K+W F +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V
Sbjct: 572 KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPL 631
Query: 459 YYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHA 518
YY V++D EL+ WW E GH D KD+PWWP L+T EDL+++ I W+AS HA
Sbjct: 632 YYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHA 691
Query: 519 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA 578
AVNFGQY +GG NRPT +R +P + +++ + E L+ S++ ++
Sbjct: 692 AVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLS 749
Query: 579 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NR 637
+++ LS+H+ DE YLG++ W D AF++F +LKE+E + RN + +L+ NR
Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809
Query: 638 TGAGMVPYELMKPFSEPGVTGQGVPYSISI 667
G +PY L+ P SE G+T +G+P SISI
Sbjct: 810 LGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 218/472 (46%), Gaps = 42/472 (8%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W D FG Q L G NP IR TE P + +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLE 291
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD 284
+ ++Q +FI+D+ L K L L + + + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 285 GKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
P +F PS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
A+HPI +LL H R+T+ IN ARE L+ G+ + + G H +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHVQMV 454
Query: 405 HEALPKDLISRGMAVEDPSAPRGI--KLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
A+ KDL + + RG+ K I Y + DGL +W+A++ + + V+ YY
Sbjct: 455 QRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
VE D EL+ + ++ G +K + +K+ E L + +T + + AS HAAVNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQY + + PN P R P + +E+ D L P + ++ + +
Sbjct: 574 GQYDWASWIPNAPPTMRAP-----PPTAKGVVTIEQIVDTL----PDRGRSCWHLGAVWA 624
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENL 634
LS +E +LG E+ + + PV K A RF L+ + +I ERN N L
Sbjct: 625 LSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL 675
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 218/472 (46%), Gaps = 42/472 (8%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W D FG Q L G NP IR TE P + +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLE 291
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD 284
+ ++Q +FI+D+ L K L L + + + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 285 GKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
P +F PS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
A+HPI +LL H R+T+ IN ARE L+ G+ + + G H +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHVQMV 454
Query: 405 HEALPKDLISRGMAVEDPSAPRGI--KLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
A+ KDL + + RG+ K I Y + DGL +W+A++ + + V+ YY
Sbjct: 455 QRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
VE D EL+ + ++ G +K + +K+ E L + +T + + AS HAAVNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQY + + PN P R P + +E+ D L P + ++ + +
Sbjct: 574 GQYDWASWIPNAPPTMRAP-----PPTAKGVVTIEQIVDTL----PDRGRSCWHLGAVWA 624
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENL 634
LS +E +LG E+ + + PV K A RF L+ + +I ERN N L
Sbjct: 625 LSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL 675
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 218/472 (46%), Gaps = 42/472 (8%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W D FG Q L G NP IR TE P + +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLERQLSLE 291
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD 284
+ ++Q +FI+D+ L K L L + + + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 285 GKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
P +F PS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
A+HPI +LL H R+T+ IN ARE L+ G+ + + G H +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHVQMV 454
Query: 405 HEALPKDLISRGMAVEDPSAPRGI--KLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
A+ KDL + + RG+ K I Y + DGL +W+A++ + + V+ YY
Sbjct: 455 QRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
VE D EL+ + ++ G +K + +K+ E L + +T + + AS HAAVNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQY + + PN P R P + +E+ D L P + ++ + +
Sbjct: 574 GQYDWASWIPNAPPTMRAP-----PPTAKGVVTIEQIVDTL----PDRGRSCWHLGAVWA 624
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENL 634
LS +E +LG E+ + + PV K A RF L+ + +I ERN N L
Sbjct: 625 LSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL 675
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 227/499 (45%), Gaps = 63/499 (12%)
Query: 164 FWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTV 223
+W D FG Q L G NP IR + P + E++EK + T+
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 224 EEAIKQKKLFILDYHDL-LLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPP 282
E+A+K+ +FI DY L +P ++ + + T LF+ + + P+AI+L + P
Sbjct: 298 EKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 283 MDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNR 342
+ W TP TE W W +AK + D+ YHQ+++H LR H EP +++ R
Sbjct: 356 GENNSIW----TP-LKDTE-WDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWR 409
Query: 343 QLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWR 402
L ++HP+ +LL PH + M IN L R L+ GG + S G KH+R
Sbjct: 410 NLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGG---QVTLMQKHYR 466
Query: 403 ---FDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHY 459
FD L KDL RG+ + + + D L LW+ + Q+V D + Y
Sbjct: 467 SVTFDSYDLVKDLRQRGVD------------GLRKFYYKDDALLLWNVIHQFVQDIIQIY 514
Query: 460 YPNPSSVESDEELRSWWTEIRTVGH---ADKKDEPWWPVLKTPEDLIDIITTIAWVASGH 516
Y + SV+ D E++ W ++ G+ +D D+ + E+L+ +T + + S
Sbjct: 515 YNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCSCQ 574
Query: 517 HAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTV 576
HAAVNF Q G+ PN PT+ R P E V++ ++ QA T+
Sbjct: 575 HAAVNFSQMATYGFHPNSPTLMRQPPPTEKGKSN---------HKVIMASLANKHQAVTM 625
Query: 577 MAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKN 636
+++++ L++ P E++LG + +G D AA +F L + I ERN
Sbjct: 626 VSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERN------- 677
Query: 637 RTGAGMV-PYELMKPFSEP 654
GMV PY + P P
Sbjct: 678 ---QGMVSPYTWLIPGHVP 693
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 226/524 (43%), Gaps = 69/524 (13%)
Query: 154 TPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI 213
TP DR W D FG Q L G NP + P +T E +
Sbjct: 592 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 635
Query: 214 EKEIGGIMTVEEAIKQKKLFILDYHDLL----------------LPYVEKVRELKGTTLY 257
+ ++E IK ++I+D+ L+ +P K E
Sbjct: 636 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 695
Query: 258 GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDS 317
LF+ G L P+AI++ + P P W TP H W +AK + +S
Sbjct: 696 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 749
Query: 318 GYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGG 377
+HQL +H LRTH TE + ++T R L++ HPI +LLQPH + I+ + R+ L+ +GG
Sbjct: 750 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGG 809
Query: 378 IIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPF 437
I++ + S G K LP L RG V+DPS G + +
Sbjct: 810 IVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYY 860
Query: 438 AKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVG---HADKKDEPWWP 494
DGL LW+A++ ++ + + +Y N V+ D E++SW ++ G + +D
Sbjct: 861 RDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA 920
Query: 495 VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKL 554
++ E L +++T++ + S HAAVNF Q G+ PN P + R P K
Sbjct: 921 SFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KK 971
Query: 555 FLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERF 614
E +L PS+ QA +A + L+ S DE YLG AW D + A RF
Sbjct: 972 KGEATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRF 1030
Query: 615 SGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG 658
+L+++ I +R NENL+ VPY + P P T
Sbjct: 1031 QDKLEDISKKIKQR--NENLE-------VPYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 226/524 (43%), Gaps = 69/524 (13%)
Query: 154 TPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI 213
TP DR W D FG Q L G NP + P +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 214 EKEIGGIMTVEEAIKQKKLFILDYHDLL----------------LPYVEKVRELKGTTLY 257
+ ++E IK ++I+D+ L+ +P K E
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 258 GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDS 317
LF+ G L P+AI++ + P P W TP H W +AK + +S
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 318 GYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGG 377
+HQL +H LRTH TE + ++T R L++ HPI +LLQPH + I+ + R+ L+ +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGG 439
Query: 378 IIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPF 437
I++ + S G K LP L RG V+DPS G + +
Sbjct: 440 IVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYY 490
Query: 438 AKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVG---HADKKDEPWWP 494
DGL LW+A++ ++ + + +Y N V+ D E++SW ++ G + +D
Sbjct: 491 RDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA 550
Query: 495 VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKL 554
++ E L +++T++ + S HAAVNF Q G+ PN P + R P K
Sbjct: 551 SFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KK 601
Query: 555 FLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERF 614
E +L PS+ QA +A + L+ S DE YLG AW D + A RF
Sbjct: 602 KGEATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRF 660
Query: 615 SGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG 658
+L+++ I +R NENL+ VPY + P P T
Sbjct: 661 QDKLEDISKKIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 226/524 (43%), Gaps = 69/524 (13%)
Query: 154 TPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI 213
TP DR W D FG Q L G NP + P +T E +
Sbjct: 225 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 268
Query: 214 EKEIGGIMTVEEAIKQKKLFILDYHDLL----------------LPYVEKVRELKGTTLY 257
+ ++E IK ++I+D+ L+ +P K E
Sbjct: 269 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 328
Query: 258 GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDS 317
LF+ G L P+AI++ + P P W TP H W +AK + +S
Sbjct: 329 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 382
Query: 318 GYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGG 377
+HQL +H LRTH TE + ++T R L++ HP+ +LLQPH + I+ + R+ L+ +GG
Sbjct: 383 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGG 442
Query: 378 IIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPF 437
I++ + S G K LP L RG V+DPS G + +
Sbjct: 443 IVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYY 493
Query: 438 AKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVG---HADKKDEPWWP 494
DGL LW+A++ ++ + + +Y N V+ D E++SW ++ G + +D
Sbjct: 494 RDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA 553
Query: 495 VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKL 554
++ E L +++T++ + S HAAVNF Q G+ PN P V R P K
Sbjct: 554 SFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPP---------KK 604
Query: 555 FLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERF 614
E +L PS+ QA +A + L+ S DE YLG AW D + A RF
Sbjct: 605 KGEATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRF 663
Query: 615 SGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG 658
+L+++ I +R NENL+ VPY + P P T
Sbjct: 664 QDKLEDISKKIKQR--NENLE-------VPYIYLLPERIPNGTA 698
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 225/524 (42%), Gaps = 69/524 (13%)
Query: 154 TPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI 213
TP DR W D FG Q L G NP + P +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 214 EKEIGGIMTVEEAIKQKKLFILDYHDLL----------------LPYVEKVRELKGTTLY 257
+ ++E IK ++I+D+ L+ +P K E
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 258 GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDS 317
LF+ G L P+AI++ + P P W TP H W +AK + +S
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 318 GYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGG 377
+HQL +H LRTH TE + ++T R L++ HPI +LLQPH + I+ + R+ L +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGG 439
Query: 378 IIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPF 437
I++ + S G K LP L RG V+DPS G + +
Sbjct: 440 IVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYY 490
Query: 438 AKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVG---HADKKDEPWWP 494
DGL LW+A++ ++ + + +Y N V+ D E++SW ++ G + +D
Sbjct: 491 RDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA 550
Query: 495 VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKL 554
++ E L +++T++ + S HAAVNF Q G+ PN P + R P K
Sbjct: 551 SFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KK 601
Query: 555 FLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERF 614
E +L PS+ QA +A + L+ S DE YLG AW D + A RF
Sbjct: 602 KGEATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRF 660
Query: 615 SGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG 658
+L+++ I +R NENL+ VPY + P P T
Sbjct: 661 QDKLEDISKKIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 225/524 (42%), Gaps = 69/524 (13%)
Query: 154 TPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI 213
TP DR W D FG Q L G NP + P +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 214 EKEIGGIMTVEEAIKQKKLFILDYHDLL----------------LPYVEKVRELKGTTLY 257
+ ++E IK ++I+D+ L+ +P K E
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 258 GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDS 317
LF+ G L P+AI++ + P P W TP H W +AK + +S
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 318 GYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGG 377
+HQL +H LRTH TE + ++T R L++ HPI +LLQPH + I+ + R+ L +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGG 439
Query: 378 IIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPF 437
I++ + S G K LP L RG V+DPS G + +
Sbjct: 440 IVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYY 490
Query: 438 AKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVG---HADKKDEPWWP 494
DGL LW+A++ ++ + + +Y N V+ D E++SW ++ G + +D
Sbjct: 491 RDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA 550
Query: 495 VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKL 554
++ E L +++T++ + S HAAVNF Q G+ PN P + R P K
Sbjct: 551 SFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KK 601
Query: 555 FLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERF 614
E +L PS+ QA +A + L+ S DE YLG AW D + A RF
Sbjct: 602 KGEATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRF 660
Query: 615 SGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG 658
+L+++ I +R NENL+ VPY + P P T
Sbjct: 661 QDKLEDISKKIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 216/495 (43%), Gaps = 60/495 (12%)
Query: 159 DRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIG 218
+R + W D FG Q L G NP +R E P R + PP + +EKE+
Sbjct: 127 ERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPAR------LKFPPGMEELQAQLEKELQ 180
Query: 219 GIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIEL 278
G LF D+ LL V L + P G L P+ I+L
Sbjct: 181 G----------GTLFEADF-SLLDGIKANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQL 229
Query: 279 TRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII 338
+ P +G P +F P + +W LAK V + D H+L SH LR H E +
Sbjct: 230 -QLPREGSP-LPPLFLP---TDPPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAV 284
Query: 339 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIE---STFSPGKYSMELSSV 395
AT R L ++HPI +LL PHFRYTMEIN AR LV+ GI + ST G + +
Sbjct: 285 ATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAA 344
Query: 396 AYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDF 455
A + F P DL RG+ L +E +A+D L LW+ + ++V
Sbjct: 345 ALLTYSSF---CPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGI 389
Query: 456 VNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASG 515
V+ +Y SV+ D EL++W E +G +D + L++ E L +T + +G
Sbjct: 390 VSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTCTG 449
Query: 516 HHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATT 575
H++ + GQ + + PN P R + P+ +D L + ++ P+ QA+
Sbjct: 450 QHSSNHLGQLDWYTWVPNAPCTMR----LPPPTTKDATL------ETVMATLPNFHQASL 499
Query: 576 VMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK 635
M+I L P LG Q E+ + P KA +F L L+ I+ RNA L
Sbjct: 500 QMSITWQLGRCQPTMVALG-QHEEEYFSGPGPKAVLTKFREELAALDKDIEVRNAKLAL- 557
Query: 636 NRTGAGMVPYELMKP 650
PYE ++P
Sbjct: 558 --------PYEYLRP 564
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 211/489 (43%), Gaps = 60/489 (12%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W D FG Q L G NP +R + P R PP + +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD 284
K LF D+ LL V L + P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 285 GKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
P +F P+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGI---IESTFSPGKYSMELSSVAYDKHW 401
++HP+ +L+ PH RYT+EIN AR LV+ GI I ST G + + A+ +
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 402 RFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYP 461
F P DL RG+ L +E +A+D L LW+ + ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 462 NPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVN 521
+V D EL+SW EI +G + + + L++ +T + +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 522 FGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILD 581
GQ + + PN P R + P+ +D L + ++ P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMR----LPPPTTKDATL------ETVMATLPNLKQSSLQMSIVW 594
Query: 582 TLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAG 641
L P LG+ E+ + P +A E+F L ++ I+ RN +
Sbjct: 595 QLGRDQPIMVPLGQHQEEYF-SGPEPRAVLEKFREELAIMDKEIEVRNEKLD-------- 645
Query: 642 MVPYELMKP 650
+PYE ++P
Sbjct: 646 -IPYEYLRP 653
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 211/489 (43%), Gaps = 60/489 (12%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W D FG Q L G NP +R + P R PP + +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD 284
K LF D+ LL V L + P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 285 GKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
P +F P+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGI---IESTFSPGKYSMELSSVAYDKHW 401
++HP+ +L+ PH RYT+EIN AR LV+ GI I ST G + + A+ +
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 402 RFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYP 461
F P DL RG+ L +E +A+D L LW+ + ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 462 NPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVN 521
+V D EL+SW EI +G + + + L++ +T + +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 522 FGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILD 581
GQ + + PN P R + P+ +D L + ++ P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMR----LPPPTTKDATL------ETVMATLPNLHQSSLQMSIVW 594
Query: 582 TLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAG 641
L P LG+ E+ + P +A E+F L ++ I+ RN +
Sbjct: 595 QLGRDQPIMVPLGQHQEEYF-SGPEPRAVLEKFREELAIMDKEIEVRNEKLD-------- 645
Query: 642 MVPYELMKP 650
+PYE ++P
Sbjct: 646 -IPYEYLRP 653
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 199/488 (40%), Gaps = 57/488 (11%)
Query: 165 WFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVE 224
W DE F Q L G NP +R T P R L P + +EKE+
Sbjct: 68 WQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGMEELRAQLEKEL------- 114
Query: 225 EAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFF--SYPSGTLRPLAIELTRPP 282
+ LF D+ +LL + ++G Y + L P+G L+P+ I++
Sbjct: 115 ---QNGSLFEADF--ILLDGI-PANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQP-- 166
Query: 283 MDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNR 342
+ +F PS W LAK+ V D H++ H L TH E +AT R
Sbjct: 167 PNPSSPTPTLFLPS---DPPLAWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMR 223
Query: 343 QLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWR 402
L +HPI + L PH RYTMEIN AR L++ GGI + S G
Sbjct: 224 CLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLT 283
Query: 403 FDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN 462
+ P DL RG+ L + +A D L LW+ + ++V V+ +Y
Sbjct: 284 YCSLCPPDDLADRGL------------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQR 331
Query: 463 PSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF 522
V+ D EL++W EI VG +D + ++ L +T + + HAA+N
Sbjct: 332 DDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQ 391
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDT 582
GQ + + PN P R P + ED + ++ P QA MAI
Sbjct: 392 GQLDWYAWVPNAPCTMRMPPPT---TKEDVTM------ATVMGSLPDVRQACLQMAISWH 442
Query: 583 LSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGM 642
LS PD LG E+ + P KA +F L++LE I RN +
Sbjct: 443 LSRRQPDMVPLGHHKEK-YFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDW-------- 493
Query: 643 VPYELMKP 650
PYE +KP
Sbjct: 494 -PYEYLKP 500
>pdb|2KOD|A Chain A, A High-Resolution Nmr Structure Of The Dimeric C-Terminal
Domain Of Hiv-1 Ca
pdb|2KOD|B Chain B, A High-Resolution Nmr Structure Of The Dimeric C-Terminal
Domain Of Hiv-1 Ca
Length = 88
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 8 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAAT 67
Query: 502 LIDIITTIAWVAS-GHHAAV 520
L +++T V GH A V
Sbjct: 68 LEEMMTACQGVGGPGHKARV 87
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 502 LIDIITTIAWVAS-GHHAAV 520
L +++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|1A43|A Chain A, Structure Of The Hiv-1 Capsid Protein Dimerization Domain
At 2.6a Resolution
Length = 87
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 7 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGAT 66
Query: 502 LIDIITTIAWVAS-GHHAAV 520
L +++T V GH A V
Sbjct: 67 LEEMMTACQGVGGPGHKARV 86
>pdb|2BUO|A Chain A, Hiv-1 Capsid C-Terminal Domain In Complex With An
Inhibitor Of Particle Assembly
pdb|3LRY|A Chain A, Crystal Structure Of Synthetic Hiv-1 Capsid C-Terminal
Domain (Cca)
pdb|3LRY|B Chain B, Crystal Structure Of Synthetic Hiv-1 Capsid C-Terminal
Domain (Cca)
pdb|2XT1|A Chain A, Crystal Structure Of The Hiv-1 Capsid Protein C-Terminal
Domain (146-231) In Complex With A Camelid Vhh
Length = 86
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 502 LIDIITTIAWVAS-GHHAAV 520
L +++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|3GRR|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Homocysteine And Methanocaldococcus Jannaschi Dim1.
pdb|3GRU|A Chain A, Crystal Structure Of The Complex Between Amp And
Methanocaldococcus Jannaschi Dim1
pdb|3GRV|A Chain A, Crystal Structure Of The Complex Between Adenosine And
Methanocaldococcus Jannaschi Dim1
pdb|3GRY|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Methionine And Methanocaldococcus Jannaschi Dim1
Length = 295
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 205 ESA-ITKELIEKEIG---GIMTVEEAIKQKKLFILDYHDLLLPYVEKVREL 251
ESA +TK+ + EIG GI+T E A KK+++++ L PY K++EL
Sbjct: 44 ESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL 94
>pdb|3FYD|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 263
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 205 ESA-ITKELIEKEIG---GIMTVEEAIKQKKLFILDYHDLLLPYVEKVREL 251
ESA +TK+ + EIG GI+T E A KK+++++ L PY K++EL
Sbjct: 15 ESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL 65
>pdb|3FYC|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
pdb|3FYC|B Chain B, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 265
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 205 ESA-ITKELIEKEIG---GIMTVEEAIKQKKLFILDYHDLLLPYVEKVREL 251
ESA +TK+ + EIG GI+T E A KK+++++ L PY K++EL
Sbjct: 17 ESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL 67
>pdb|3DPH|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (L211s)
pdb|3DPH|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (L211s)
pdb|3DS4|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (L211s) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS4|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (L211s) In Complex
With An Inhibitor Of Particle Assembly (Cai)
Length = 86
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 502 LIDIITTIAWVAS-GHHAAV 520
+++T V GH A V
Sbjct: 66 SEEMMTACQGVGGPGHKARV 85
>pdb|2OYZ|A Chain A, Crystal Structure Of Unknown Function Protein Vpa0057 From
Vibrio Parahaemolyticus (Targeted Domain 2-94)
Length = 94
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLF 555
G+YTFG P R TV + + ++ + DW +
Sbjct: 33 GEYTFGTQAPERXTVVKGALVVKRVGEADWTTY 65
>pdb|1BAJ|A Chain A, Hiv-1 Capsid Protein C-Terminal Fragment Plus Gag P2
Domain
Length = 101
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 442 LDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPED 501
LD+ K+ D+V+ +Y + ++ +E+++W TE V +A+ + L
Sbjct: 7 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGAT 66
Query: 502 LIDIITTIAWVAS-GHHAAV 520
L +++T V GH A V
Sbjct: 67 LEEMMTACQGVGGPGHKARV 86
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,265,243
Number of Sequences: 62578
Number of extensions: 1003926
Number of successful extensions: 2610
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2429
Number of HSP's gapped (non-prelim): 49
length of query: 667
length of database: 14,973,337
effective HSP length: 105
effective length of query: 562
effective length of database: 8,402,647
effective search space: 4722287614
effective search space used: 4722287614
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)