Your job contains 1 sequence.
>005965
MASVHATTTSIVCKNGIHSTPAKLPSTSFLPGFDVVACKKEICSSMSSGISAALTFDPPT
ANSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSG
DEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCA
TREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEV
YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWE
VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY
EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE
GPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL
CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQF
ALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEAL
QQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYISSSQNSRSMLSYFPFVNDKVKGI
TSKRAQK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005965
(667 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060604 - symbol:THIC "AT2G29630" species:3702... 3004 3.5e-313 1
TIGR_CMR|BA_5463 - symbol:BA_5463 "thiamine biosynthesis ... 1785 5.1e-188 2
UNIPROTKB|P30136 - symbol:thiC "thiamin biosynthesis prot... 1691 2.9e-183 2
UNIPROTKB|Q9KVS8 - symbol:thiC "Phosphomethylpyrimidine s... 1708 6.1e-183 2
TIGR_CMR|VC_0061 - symbol:VC_0061 "thiamin biosynthesis p... 1708 6.1e-183 2
UNIPROTKB|P66911 - symbol:thiC "Phosphomethylpyrimidine s... 1773 9.7e-183 1
TIGR_CMR|CPS_0250 - symbol:CPS_0250 "thiamine biosynthesi... 1698 5.5e-182 2
TIGR_CMR|SO_2445 - symbol:SO_2445 "thiamin biosynthesis p... 1654 2.3e-181 3
TIGR_CMR|ECH_0798 - symbol:ECH_0798 "thiamin biosynthesis... 1500 2.2e-168 3
TIGR_CMR|CBU_0330 - symbol:CBU_0330 "thiamine biosynthesi... 1512 2.7e-167 2
TIGR_CMR|APH_0600 - symbol:APH_0600 "thiamine biosynthesi... 1479 2.0e-165 3
TIGR_CMR|DET_0775 - symbol:DET_0775 "thiamine biosynthesi... 955 4.7e-96 1
TIGR_CMR|CHY_0747 - symbol:CHY_0747 "thiamine biosynthesi... 954 5.9e-96 1
TIGR_CMR|GSU_0604 - symbol:GSU_0604 "thiamine biosynthesi... 919 3.0e-92 1
TIGR_CMR|CJE_0503 - symbol:CJE_0503 "thiamine biosynthesi... 900 3.1e-90 1
TIGR_CMR|GSU_3005 - symbol:GSU_3005 "thiamine biosynthesi... 752 1.5e-74 1
>TAIR|locus:2060604 [details] [associations]
symbol:THIC "AT2G29630" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=IEA;ISS;IMP]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016045 "detection
of bacterium" evidence=IMP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0010266 "response to vitamin B1" evidence=IEP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] [GO:0080041 "ADP-ribose
pyrophosphohydrolase activity" evidence=IGI] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0019760
"glucosinolate metabolic process" evidence=RCA] [GO:0043085
"positive regulation of catalytic activity" evidence=RCA]
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0051539
GO:GO:0051536 EMBL:AC005496 GO:GO:0009228 GO:GO:0009229
GO:GO:0016829 GO:GO:0010266 GO:GO:0080041 eggNOG:COG0422
HOGENOM:HOG000224484 KO:K03147 InterPro:IPR025747 Pfam:PF13667
TIGRFAMs:TIGR00190 EMBL:AY092989 EMBL:AY128756 IPI:IPI00519515
PIR:F84698 RefSeq:NP_001189634.1 RefSeq:NP_180524.1
RefSeq:NP_850135.1 UniGene:At.24797 ProteinModelPortal:O82392
SMR:O82392 STRING:O82392 PaxDb:O82392 PRIDE:O82392
EnsemblPlants:AT2G29630.1 EnsemblPlants:AT2G29630.2
EnsemblPlants:AT2G29630.3 GeneID:817513 KEGG:ath:AT2G29630
TAIR:At2g29630 InParanoid:O82392 OMA:FDWNKQF PhylomeDB:O82392
ProtClustDB:PLN02444 BioCyc:MetaCyc:AT2G29630-MONOMER
Genevestigator:O82392 Uniprot:O82392
Length = 644
Score = 3004 (1062.5 bits), Expect = 3.5e-313, P = 3.5e-313
Identities = 555/641 (86%), Positives = 594/641 (92%)
Query: 2 ASVHATTTSIVCKNGIHSTPAKLPSTSFLPGFDVVA-CKKEICSSMSSGISAALTFDPPT 60
ASVH T S+VC N HS KLP++S LPGFDVV ++ A LTFDPPT
Sbjct: 3 ASVHCTLMSVVCNNKNHSARPKLPNSSLLPGFDVVVQAAATRFKKETTTTRATLTFDPPT 62
Query: 61 ANSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSG 120
NS+ QRKHT DP+SPDF P+PSFE+CFPKS+KE++E+ HEESGH+L+VPFRR+HLSG
Sbjct: 63 TNSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTKEHKEVVHEESGHVLKVPFRRVHLSG 122
Query: 121 DEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCA 180
EP FD YDTSGPQN++ +GL KLRK+WIDRREKLG PRYTQMYYAKQG+ITEEMLYCA
Sbjct: 123 GEPAFDNYDTSGPQNVNAHIGLAKLRKEWIDRREKLGTPRYTQMYYAKQGIITEEMLYCA 182
Query: 181 TREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEV 240
TREKLDPEFVR+EVARGRAIIPSNKKHLELEPMIVGR FLVKVNANIGNSAVASSIEEEV
Sbjct: 183 TREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEEEV 242
Query: 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWE 300
YKVQWATMWGADT+MDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENL+WE
Sbjct: 243 YKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLNWE 302
Query: 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY 360
VFR+TLIEQAEQGVDYFTIHAGVLLRYIPLTAKR+TGIVSRGGSIHAKWCLAYHKENFAY
Sbjct: 303 VFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGGSIHAKWCLAYHKENFAY 362
Query: 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420
EHWD+ILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAW+KDVQVMNE
Sbjct: 363 EHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNE 422
Query: 421 GPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL 480
GPGH+PMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL
Sbjct: 423 GPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL 482
Query: 481 CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQF 540
CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAK HP AQ WDDALSKARFEFRWMDQF
Sbjct: 483 CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEFRWMDQF 542
Query: 541 ALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEAL 600
ALSLDPMTAMSFHDETLP++GAKVAHFCSMCGPKFCSMKITED+RKYAEE+GYGSAEEA+
Sbjct: 543 ALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAEENGYGSAEEAI 602
Query: 601 QQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYISSSQ 641
+QGMDAMS EF AKKT+SGEQHGEVGGEIYLPESY+ ++Q
Sbjct: 603 RQGMDAMSEEFNIAKKTISGEQHGEVGGEIYLPESYVKAAQ 643
>TIGR_CMR|BA_5463 [details] [associations]
symbol:BA_5463 "thiamine biosynthesis protein ThiC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0051539
GO:GO:0009228 GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422
HOGENOM:HOG000224484 KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284
InterPro:IPR025747 Pfam:PF13667 TIGRFAMs:TIGR00190
RefSeq:NP_847631.1 RefSeq:YP_022126.1 RefSeq:YP_031315.1
ProteinModelPortal:Q81WY7 IntAct:Q81WY7 DNASU:1085086
EnsemblBacteria:EBBACT00000012172 EnsemblBacteria:EBBACT00000014295
EnsemblBacteria:EBBACT00000020887 GeneID:1085086 GeneID:2819150
GeneID:2850885 KEGG:ban:BA_5463 KEGG:bar:GBAA_5463 KEGG:bat:BAS5076
BioCyc:BANT260799:GJAJ-5151-MONOMER
BioCyc:BANT261594:GJ7F-5329-MONOMER Uniprot:Q81WY7
Length = 586
Score = 1785 (633.4 bits), Expect = 5.1e-188, Sum P(2) = 5.1e-188
Identities = 337/459 (73%), Positives = 386/459 (84%)
Query: 153 REKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEP 212
R K GA TQM+YA+ G+I EM Y A RE +DPEFVR E+A GRAI+P+N H E EP
Sbjct: 121 RAKQGA-NVTQMHYARNGIIKSEMEYVAIREGVDPEFVRKEIAEGRAILPANINHPEAEP 179
Query: 213 MIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILR 272
MI+GRNF VKVNANIGNSAV+SSI EEV K+ WAT WGADT+MDLSTG++IH TREWI+R
Sbjct: 180 MIIGRNFHVKVNANIGNSAVSSSIAEEVEKMTWATRWGADTIMDLSTGKNIHTTREWIIR 239
Query: 273 NSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTA 332
N+ VPVGTVPIYQALEKV+GIAE+L+WEV+RDTLIEQAEQGVDYFTIHAGVLLRYIP+TA
Sbjct: 240 NAPVPVGTVPIYQALEKVNGIAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVLLRYIPITA 299
Query: 333 KRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDAN 392
KR TGIVSRGGSI A+WCL +HKENF Y H++EI +I QYDV+ S+GDGLRPGSI DAN
Sbjct: 300 KRTTGIVSRGGSIMAQWCLFHHKENFLYTHFEEICEIMKQYDVSFSLGDGLRPGSIADAN 359
Query: 393 DTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPL 452
D AQF+EL T GELT+ AW DVQVM EGPGH+PMH I ENM+K+L+ C APFYTLGPL
Sbjct: 360 DEAQFSELETLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMEKELDICQGAPFYTLGPL 419
Query: 453 TTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAAD 512
TTDIAPGYDHITSAIGAA IG GTA+LCYVTPKEHLGLPN+DDV+ GVI YKIAAHAAD
Sbjct: 420 TTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVREGVITYKIAAHAAD 479
Query: 513 LAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCG 572
LAKGH A DDALSKARFEFRW DQF LSLDP AM +HDETLP+EGAK AHFCSMCG
Sbjct: 480 LAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEGAKTAHFCSMCG 539
Query: 573 PKFCSMKITEDVRKYAEEHGYGSAEEALQQGMDAMSAEF 611
PKFCSM+I+ D+R+YA+E+ + E A+++GM + EF
Sbjct: 540 PKFCSMRISHDIREYAKENDLETTE-AIEKGMKEKAKEF 577
Score = 60 (26.2 bits), Expect = 5.1e-188, Sum P(2) = 5.1e-188
Identities = 25/72 (34%), Positives = 30/72 (41%)
Query: 91 PKSSKEYREITHEESGHILQVPFRRIHLSGDE--PN--FDTYDTSGPQN-----ISPRVG 141
P S K Y + E G ++VP R I S PN YDTSGP + G
Sbjct: 17 PGSKKVYVDGPRE--G--MKVPMREIEQSDTNGVPNPPIRVYDTSGPYTDPAYKVELEKG 72
Query: 142 LPKLRKDWIDRR 153
+P R WI R
Sbjct: 73 IPTPRHSWILER 84
>UNIPROTKB|P30136 [details] [associations]
symbol:thiC "thiamin biosynthesis protein ThiC"
species:83333 "Escherichia coli K-12" [GO:0009229 "thiamine
diphosphate biosynthetic process" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009228 "thiamine biosynthetic process" evidence=IEA]
HAMAP:MF_00089 InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 EMBL:U00006
GO:GO:0009228 GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422
HOGENOM:HOG000224484 KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284
InterPro:IPR025747 Pfam:PF13667 TIGRFAMs:TIGR00190 EMBL:M88701
PIR:E65206 RefSeq:NP_418422.1 RefSeq:YP_491466.1
ProteinModelPortal:P30136 SMR:P30136 DIP:DIP-10982N IntAct:P30136
PRIDE:P30136 EnsemblBacteria:EBESCT00000001535
EnsemblBacteria:EBESCT00000017169 GeneID:12930341 GeneID:948492
KEGG:ecj:Y75_p3202 KEGG:eco:b3994 PATRIC:32123511 EchoBASE:EB1544
EcoGene:EG11585 BioCyc:EcoCyc:THIC-MONOMER
BioCyc:ECOL316407:JW3958-MONOMER BioCyc:MetaCyc:THIC-MONOMER
Genevestigator:P30136 Uniprot:P30136
Length = 631
Score = 1691 (600.3 bits), Expect = 2.9e-183, Sum P(2) = 2.9e-183
Identities = 320/431 (74%), Positives = 363/431 (84%)
Query: 183 EKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYK 242
E + EFVR EVA GRAIIP+N H E EPMI+GRNFLVKVNANIGNSAV SSIEEEV K
Sbjct: 196 ENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEK 255
Query: 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVF 302
+ W+T WGADTVMDLSTGR+IHETREWILRNS VP+GTVPIYQALEKV+GIAE+L+WE F
Sbjct: 256 LVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAF 315
Query: 303 RDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEH 362
RDTL+EQAEQGVDYFTIHAGVLLRY+P+TAKR+TGIVSRGGSI AKWCL++H+ENF Y+H
Sbjct: 316 RDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQH 375
Query: 363 WDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422
+ EI +IC YDV+LS+GDGLRPGSI DAND AQFAEL T GELT+ AW+ DVQVM EGP
Sbjct: 376 FREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGP 435
Query: 423 GHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCY 482
GH+PM I NM ++LE C+EAPFYTLGPLTTDIAPGYDH TS IGAA IG G A+LCY
Sbjct: 436 GHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCY 495
Query: 483 VTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFAL 542
VTPKEHLGLPN++DVK G+I YKIAAHAADLAKGHP AQ D+A+SKARFEFRW DQF L
Sbjct: 496 VTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNL 555
Query: 543 SLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEALQQ 602
+LDP TA ++HDETLP E KVAHFCSMCGPKFCSMKI+++VR YA A + ++
Sbjct: 556 ALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYA-------ATQTIEM 608
Query: 603 GMDAMSAEFLA 613
GM MS F A
Sbjct: 609 GMADMSENFRA 619
Score = 109 (43.4 bits), Expect = 2.9e-183, Sum P(2) = 2.9e-183
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 141 GLPKLRKDWI--DRREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVAR 196
GL +LR + +R K G R TQ++YA+QG+IT EM + A RE + E +R+EV R
Sbjct: 126 GLDELRFSGVLTPKRAKAGR-RVTQLHYARQGIITPEMEFIAIRENMGRERIRSEVLR 182
Score = 81 (33.6 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
Identities = 43/166 (25%), Positives = 71/166 (42%)
Query: 90 FPKSSKEYREITH---EESGHILQVPFRRIHLSGDEPNFD------TYDTSGPQN----- 135
FP S + Y TH +Q+ I S ++P ++ YDTSGP
Sbjct: 27 FPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSKEQPQYEENEAIPVYDTSGPYGDPQIA 86
Query: 136 ISPRVGLPKLRKDWIDRR---EKLG--APRYTQMYYAKQGVITEEMLYCATREKLDPEFV 190
I+ + GL KLR+ WID R E+L + YT+ A G+ +E+ + L P+
Sbjct: 87 INVQQGLAKLRQPWIDARGDTEELTVRSSDYTKARLADDGL--DELRFSGV---LTPKRA 141
Query: 191 RAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSI 236
+A GR + + H + +I + + N+G + S +
Sbjct: 142 KA----GRRV---TQLHYARQGIITPEMEFIAIRENMGRERIRSEV 180
>UNIPROTKB|Q9KVS8 [details] [associations]
symbol:thiC "Phosphomethylpyrimidine synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009228
"thiamine biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0003824
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051539
GO:GO:0009228 GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 KO:K03147
OMA:IAENLTW ProtClustDB:PRK09284 InterPro:IPR025747 Pfam:PF13667
TIGRFAMs:TIGR00190 PIR:H82368 RefSeq:NP_229720.1
ProteinModelPortal:Q9KVS8 DNASU:2614465 GeneID:2614465
KEGG:vch:VC0061 PATRIC:20079180 Uniprot:Q9KVS8
Length = 645
Score = 1708 (606.3 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 323/437 (73%), Positives = 368/437 (84%)
Query: 185 LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244
+ PEFVR E+A GRAIIP N H E EPMI+GRNFLVKVNANIGNS+V+SSIEEEV K+
Sbjct: 194 ITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLV 253
Query: 245 WATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRD 304
WAT WGADTVMDLSTGR+IHETREWILRNS VP+GTVP+YQALEKV+G+AENL+WEV RD
Sbjct: 254 WATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRD 313
Query: 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD 364
TL+EQAEQGVDYFTIHAG+LLRY+P+TAKR+TGIVSRGGSI AKWCL++H+ENF Y H+
Sbjct: 314 TLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHHQENFLYTHFR 373
Query: 365 EILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424
EI +IC QYDVALS+GDGLRPGSI DAND AQFAEL T GELT+ AW+ DVQVM EGPGH
Sbjct: 374 EICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYDVQVMIEGPGH 433
Query: 425 IPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVT 484
+PMH I NM +QL+ C+EAPFYTLGPLTTDIAPGYDHITS IGAA IG G A+LCYVT
Sbjct: 434 VPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVT 493
Query: 485 PKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSL 544
PKEHLGLPN++DVK G+I YK+AAHAADLAKGHP AQ D+ALSKARFEFRW DQF L+L
Sbjct: 494 PKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLAL 553
Query: 545 DPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSA-------E 597
DP+TA +FHDETLP E KVAHFCSMCGPKFCSMKI+++VR YA +
Sbjct: 554 DPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTLDTTVIDLVMPA 613
Query: 598 EALQQGMDAMSAEFLAA 614
E++Q M S EFLA+
Sbjct: 614 ESIQLAMQDKSREFLAS 630
Score = 89 (36.4 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 142 LPKLRKDWIDR-REKLGAPRYTQMYYAKQGVITEEMLYCATRE 183
L +LR + R R +G R TQ++YA+QG+IT EM + A RE
Sbjct: 123 LDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRE 165
Score = 71 (30.1 bits), Expect = 4.9e-181, Sum P(2) = 4.9e-181
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 122 EPN--FDTYDTSG----PQN-ISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITE 174
EPN YDTSG P + I GLPKLR++WI+ R ++A++ + E
Sbjct: 62 EPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADE 121
Query: 175 EM 176
+
Sbjct: 122 TL 123
>TIGR_CMR|VC_0061 [details] [associations]
symbol:VC_0061 "thiamin biosynthesis protein ThiC"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0003824
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051539
GO:GO:0009228 GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 KO:K03147
OMA:IAENLTW ProtClustDB:PRK09284 InterPro:IPR025747 Pfam:PF13667
TIGRFAMs:TIGR00190 PIR:H82368 RefSeq:NP_229720.1
ProteinModelPortal:Q9KVS8 DNASU:2614465 GeneID:2614465
KEGG:vch:VC0061 PATRIC:20079180 Uniprot:Q9KVS8
Length = 645
Score = 1708 (606.3 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 323/437 (73%), Positives = 368/437 (84%)
Query: 185 LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244
+ PEFVR E+A GRAIIP N H E EPMI+GRNFLVKVNANIGNS+V+SSIEEEV K+
Sbjct: 194 ITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLV 253
Query: 245 WATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRD 304
WAT WGADTVMDLSTGR+IHETREWILRNS VP+GTVP+YQALEKV+G+AENL+WEV RD
Sbjct: 254 WATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRD 313
Query: 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD 364
TL+EQAEQGVDYFTIHAG+LLRY+P+TAKR+TGIVSRGGSI AKWCL++H+ENF Y H+
Sbjct: 314 TLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHHQENFLYTHFR 373
Query: 365 EILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424
EI +IC QYDVALS+GDGLRPGSI DAND AQFAEL T GELT+ AW+ DVQVM EGPGH
Sbjct: 374 EICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYDVQVMIEGPGH 433
Query: 425 IPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVT 484
+PMH I NM +QL+ C+EAPFYTLGPLTTDIAPGYDHITS IGAA IG G A+LCYVT
Sbjct: 434 VPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVT 493
Query: 485 PKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSL 544
PKEHLGLPN++DVK G+I YK+AAHAADLAKGHP AQ D+ALSKARFEFRW DQF L+L
Sbjct: 494 PKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLAL 553
Query: 545 DPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSA-------E 597
DP+TA +FHDETLP E KVAHFCSMCGPKFCSMKI+++VR YA +
Sbjct: 554 DPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTLDTTVIDLVMPA 613
Query: 598 EALQQGMDAMSAEFLAA 614
E++Q M S EFLA+
Sbjct: 614 ESIQLAMQDKSREFLAS 630
Score = 89 (36.4 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 142 LPKLRKDWIDR-REKLGAPRYTQMYYAKQGVITEEMLYCATRE 183
L +LR + R R +G R TQ++YA+QG+IT EM + A RE
Sbjct: 123 LDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRE 165
Score = 71 (30.1 bits), Expect = 4.9e-181, Sum P(2) = 4.9e-181
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 122 EPN--FDTYDTSG----PQN-ISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITE 174
EPN YDTSG P + I GLPKLR++WI+ R ++A++ + E
Sbjct: 62 EPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADE 121
Query: 175 EM 176
+
Sbjct: 122 TL 123
>UNIPROTKB|P66911 [details] [associations]
symbol:thiC "Phosphomethylpyrimidine synthase" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00089 InterPro:IPR002817 Pfam:PF01964
UniPathway:UPA00060 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0046872 EMBL:BX842573 GO:GO:0051539 GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 HOGENOM:HOG000224484
KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284 InterPro:IPR025747
Pfam:PF13667 TIGRFAMs:TIGR00190 PIR:E70630 RefSeq:NP_214937.1
RefSeq:NP_334847.1 RefSeq:YP_006513749.1 ProteinModelPortal:P66911
SMR:P66911 PRIDE:P66911 EnsemblBacteria:EBMYCT00000002153
EnsemblBacteria:EBMYCT00000072643 GeneID:13318290 GeneID:886379
GeneID:923737 KEGG:mtc:MT0437 KEGG:mtu:Rv0423c KEGG:mtv:RVBD_0423c
PATRIC:18122676 TubercuList:Rv0423c Uniprot:P66911
Length = 547
Score = 1773 (629.2 bits), Expect = 9.7e-183, P = 9.7e-183
Identities = 360/542 (66%), Positives = 411/542 (75%)
Query: 93 SSKEYREITHEESGHILQVPFRRIHLS-GDEPNFDTYDTSGPQNISPRVGLPKLRKDWID 151
S+K YREI SG LQVPFRR+HLS GD +FD YDTSGP + V L +
Sbjct: 17 SAKAYREIEAPGSGATLQVPFRRVHLSTGD--HFDLYDTSGPYTDTDTV--IDLTAG-LP 71
Query: 152 RREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELE 211
R + R TQ+ A+ G IT EM + A RE + E VR EVARGRA+IP+N H E E
Sbjct: 72 HRPGVVRDRGTQLQRARAGEITAEMAFIAAREDMSAELVRDEVARGRAVIPANHHHPESE 131
Query: 212 PMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL 271
PMI+G+ F VKVNANIGNSAV SSI EEV K+ WAT WGADT+MDLSTG++IHETREWIL
Sbjct: 132 PMIIGKAFAVKVNANIGNSAVTSSIAEEVDKMVWATRWGADTIMDLSTGKNIHETREWIL 191
Query: 272 RNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLT 331
RNS VPVGTVPIYQALEKV G L+WE++RDT+IEQ EQGVDY T+HAGVLLRY+PLT
Sbjct: 192 RNSPVPVGTVPIYQALEKVKGDPTELTWEIYRDTVIEQCEQGVDYMTVHAGVLLRYVPLT 251
Query: 332 AKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDA 391
AKR+TGIVSRGGSI A WCLA+H+E+F Y +++E+ DI +YDV S+GDGLRPGSI DA
Sbjct: 252 AKRVTGIVSRGGSIMAAWCLAHHRESFLYTNFEELCDIFARYDVTFSLGDGLRPGSIADA 311
Query: 392 NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGP 451
ND AQFAEL T GELT+ A QVM EGPGHIPMHKI EN++ + E C EAPFYTLGP
Sbjct: 312 NDAAQFAELRTLGELTKIAKAHGAQVMIEGPGHIPMHKIVENVRLEEELCEEAPFYTLGP 371
Query: 452 LTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAA 511
L TDIAP YDHITSAIGAA I GTA+LCYVTPKEHLGLP+R DVK GVIAYKIAAHAA
Sbjct: 372 LATDIAPAYDHITSAIGAAIIAQAGTAMLCYVTPKEHLGLPDRKDVKDGVIAYKIAAHAA 431
Query: 512 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMC 571
DLAKGHP AQ DDALS ARFEFRW DQFALSLDP TA FHDETLP+E AK AHFCSMC
Sbjct: 432 DLAKGHPRAQERDDALSTARFEFRWNDQFALSLDPDTAREFHDETLPAEPAKTAHFCSMC 491
Query: 572 GPKFCSMKITEDVRKYAEEHGYGSAEEALQQGMDAMSAEFLAAKKTVSGEQHGEVGGEIY 631
GPKFCSM+IT+DVR+YA EHG + EA ++A+ A +A K + E G +Y
Sbjct: 492 GPKFCSMRITQDVREYAAEHGLET--EA---DIEAVLAAGMAEKS----REFAEHGNRVY 542
Query: 632 LP 633
LP
Sbjct: 543 LP 544
>TIGR_CMR|CPS_0250 [details] [associations]
symbol:CPS_0250 "thiamine biosynthesis protein ThiC"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
GO:GO:0051539 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 HOGENOM:HOG000224484
KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284 InterPro:IPR025747
Pfam:PF13667 TIGRFAMs:TIGR00190 RefSeq:YP_267017.1
ProteinModelPortal:Q48A96 STRING:Q48A96 GeneID:3522568
KEGG:cps:CPS_0250 PATRIC:21463895
BioCyc:CPSY167879:GI48-353-MONOMER Uniprot:Q48A96
Length = 658
Score = 1698 (602.8 bits), Expect = 5.5e-182, Sum P(2) = 5.5e-182
Identities = 317/450 (70%), Positives = 369/450 (82%)
Query: 183 EKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYK 242
E++ PEFVR EVARGRAIIP N H E EPMI+GRNFL+KVNANIGNSAV SSIEEEV K
Sbjct: 205 EQITPEFVRDEVARGRAIIPVNINHPECEPMIIGRNFLIKVNANIGNSAVTSSIEEEVEK 264
Query: 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVF 302
+ W+T WGADTVMDLSTGR+IHETREWI+RNS VP+GTVPIYQALEKV+G+AE+L+WE+F
Sbjct: 265 LVWSTKWGADTVMDLSTGRNIHETREWIMRNSPVPIGTVPIYQALEKVNGVAEDLTWEIF 324
Query: 303 RDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEH 362
RDTLIEQAEQGVDYFTIHAGVLLRY+P+TAKR+TGIVSRGGSI AKWCLA+HKENF Y H
Sbjct: 325 RDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTH 384
Query: 363 WDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422
+++I +I QYDV+ S+GDGLRPGS+ DAND AQFAEL T GELT+ AW DVQ + EGP
Sbjct: 385 FEDICEILKQYDVSFSLGDGLRPGSVADANDEAQFAELHTLGELTKIAWKHDVQTIIEGP 444
Query: 423 GHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCY 482
GH+P+H I ENM++QLE C EAPFYTLGPLTTDIAPGYDHITS IGAANIG G A+LCY
Sbjct: 445 GHVPLHMIKENMEEQLEHCGEAPFYTLGPLTTDIAPGYDHITSGIGAANIGWYGCAMLCY 504
Query: 483 VTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFAL 542
VTPKEHLGLPN++DVK G++ YKIAAHA DLAKGHP AQ D+A+SKARFEFRW DQF +
Sbjct: 505 VTPKEHLGLPNKEDVKEGLMTYKIAAHAGDLAKGHPGAQIRDNAMSKARFEFRWYDQFNI 564
Query: 543 SLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAE-EALQ 601
LDP A ++HDETLP E KVAHFCSMCGPKFCSMKI+++VR+YA + + + L
Sbjct: 565 GLDPERARTYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAANLDKNAIKIQLLD 624
Query: 602 QGMDAMSAEFLAAKKTVSGEQHGEVGGEIY 631
+ + S E + + G EIY
Sbjct: 625 ETITLTSDEAIERAMQEKSAEFKATGSEIY 654
Score = 90 (36.7 bits), Expect = 5.5e-182, Sum P(2) = 5.5e-182
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 142 LPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVR 191
LPK+R I ++ K TQM+YA+QG+IT EM Y A RE L E V+
Sbjct: 144 LPKMR---IAKKGK----NVTQMHYARQGIITPEMEYIAIRENLKREEVK 186
Score = 90 (36.7 bits), Expect = 5.5e-182, Sum P(2) = 5.5e-182
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 62 NSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEY--REITHEESGHILQVPFRRIHLS 119
N Q + A+ FL S +Q FP S K Y EI H+ + ++ +S
Sbjct: 9 NPAKKPQTRREKREAAEAFLKNVS-DQSFPNSKKVYVQGEI-HDIKVGMREITLSDTLVS 66
Query: 120 G--DEPNFD------TYDTSG---PQNISPRV--GLPKLRKDWIDRREKLGAPRYTQMYY 166
G D+P ++ YDTSG +N+ V G+P+LR+ WID R+ + T +
Sbjct: 67 GSKDKPVYEKNEPLCVYDTSGFYTDENVEIDVHKGIPRLRETWIDARDDVETFTSTHSEF 126
Query: 167 AKQ 169
A+Q
Sbjct: 127 AQQ 129
>TIGR_CMR|SO_2445 [details] [associations]
symbol:SO_2445 "thiamin biosynthesis protein ThiC"
species:211586 "Shewanella oneidensis MR-1" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0009228 "thiamine biosynthetic process"
evidence=ISS] HAMAP:MF_00089 InterPro:IPR002817 Pfam:PF01964
UniPathway:UPA00060 GO:GO:0046872 GO:GO:0051539 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009228 GO:GO:0009229 GO:GO:0016829
eggNOG:COG0422 HOGENOM:HOG000224484 KO:K03147 ProtClustDB:PRK09284
InterPro:IPR025747 Pfam:PF13667 TIGRFAMs:TIGR00190
RefSeq:NP_718035.1 GeneID:1170160 KEGG:son:SO_2445 PATRIC:23524507
OMA:HLRFEAG Uniprot:Q8EED7
Length = 721
Score = 1654 (587.3 bits), Expect = 2.3e-181, Sum P(3) = 2.3e-181
Identities = 316/442 (71%), Positives = 359/442 (81%)
Query: 185 LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244
+ PEFVR E+ARGRAIIP N H E EPM +GRNFLVKVNANIGNSAV SSIEEEV K+
Sbjct: 215 ITPEFVRDEIARGRAIIPLNINHPEAEPMTIGRNFLVKVNANIGNSAVTSSIEEEVEKLV 274
Query: 245 WATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRD 304
W+T WGADTVMDLSTGR+IHETREWI+RNS VP+GTVPIYQALEKV+G+AE+L+WEVFRD
Sbjct: 275 WSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRD 334
Query: 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD 364
TLIEQAEQGVDYFTIHAGVLLRY+P+TAKR+TGIVSRGGSI AKWCL++H+ENF Y H+
Sbjct: 335 TLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFR 394
Query: 365 EILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424
EI ++C YDV+LS+GDG+RPGSI DAND AQFAEL T GEL AW+ DVQ + EGPGH
Sbjct: 395 EICELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVNIAWEYDVQTIIEGPGH 454
Query: 425 IPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVT 484
IPM I ENM KQL C EAPFYTLGP TDIAPGYDH TS IGAA I G A+LCYVT
Sbjct: 455 IPMQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVT 514
Query: 485 PKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSL 544
PKEHLGLPN+ DVK G+IAYKIAAHAAD+AKGHP AQ D+ALSKARFEFRW DQ+ L L
Sbjct: 515 PKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGL 574
Query: 545 DPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEALQQGM 604
DP TA ++HDE+LP E AKVAHFCSMCGPKFCSMKIT+DVR YA + ++L
Sbjct: 575 DPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLEADAKAQSLAAET 634
Query: 605 DAMSAEFLAAKKTVSGEQHGEV 626
D A + ++ SG H E+
Sbjct: 635 DGALAPLGSVQQVKSG--HSEL 654
Score = 86 (35.3 bits), Expect = 2.3e-181, Sum P(3) = 2.3e-181
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 153 REKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGR 198
R L R +Q++YA+QG+IT EM Y A RE + V+ E+ R
Sbjct: 156 RRALPGKRVSQLHYARQGIITPEMEYVAIRENMALADVQDEILNRR 201
Score = 58 (25.5 bits), Expect = 2.3e-181, Sum P(3) = 2.3e-181
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 123 PNFDTYDTSGPQN-----ISPRVGLPKLRKDWIDRRE 154
P YD +GP + I+ R GL KLR WI R+
Sbjct: 82 PPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQ 118
>TIGR_CMR|ECH_0798 [details] [associations]
symbol:ECH_0798 "thiamin biosynthesis protein ThiC"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0051539 GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 HOGENOM:HOG000224484
KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284 InterPro:IPR025747
Pfam:PF13667 TIGRFAMs:TIGR00190 RefSeq:YP_507596.1
ProteinModelPortal:Q2GG37 STRING:Q2GG37 GeneID:3927286
KEGG:ech:ECH_0798 PATRIC:20577024
BioCyc:ECHA205920:GJNR-801-MONOMER Uniprot:Q2GG37
Length = 554
Score = 1500 (533.1 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 283/406 (69%), Positives = 328/406 (80%)
Query: 184 KLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKV 243
++ PEFVR E+A GRAIIP+N H E EPMI+G+NFLVK+NANIGNS V+SSIE+E+ K+
Sbjct: 149 EITPEFVRQEIASGRAIIPANVNHPESEPMIIGKNFLVKINANIGNSVVSSSIEDELQKM 208
Query: 244 QWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFR 303
+A ++GADTVMDLSTG +IH REWI+RNS VP+GTVPIYQAL KV+G+ +L + +F+
Sbjct: 209 IYAIIYGADTVMDLSTGNNIHNIREWIIRNSPVPIGTVPIYQALNKVNGVVGDLDFNIFK 268
Query: 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHW 363
TLIEQAEQGVDYFTIHAGVL YI T R+TGIVSRGG+I A WC ++KENF Y ++
Sbjct: 269 KTLIEQAEQGVDYFTIHAGVLKNYIDYTDNRLTGIVSRGGAIMAHWCTIHNKENFLYTNF 328
Query: 364 DEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423
+EI DI YD+ S+GDGLRPGSI DANDTAQF EL T GELT AW D QVM EGPG
Sbjct: 329 EEICDIMKHYDITFSLGDGLRPGSIADANDTAQFLELKTLGELTDIAWKHDCQVMIEGPG 388
Query: 424 HIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYV 483
H+PMH I EN++KQ+ +C EAPFYTLGPLTTDIAPGYDHITSAIGAA IG GT++LCYV
Sbjct: 389 HVPMHLIKENVEKQVHFCKEAPFYTLGPLTTDIAPGYDHITSAIGAAIIGWYGTSMLCYV 448
Query: 484 TPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALS 543
TPKEHLGLPN DVK GVIAYKIAAHAADLAKG+P A D ALS ARF F+W DQF LS
Sbjct: 449 TPKEHLGLPNIQDVKDGVIAYKIAAHAADLAKGNPSAYIRDYALSYARFNFKWYDQFNLS 508
Query: 544 LDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAE 589
LDP TA S HDE+LPSE AK AHFCSMCGPKFCSMK+T ++ E
Sbjct: 509 LDPETAKSLHDESLPSENAKSAHFCSMCGPKFCSMKLTHQIKSIEE 554
Score = 103 (41.3 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 86 FEQCFPKSSKEYREITHEESGHILQVPFRRIHLSGDEPNFDTYDTSGP---QNISPRV-- 140
F FP S+KEY T + ++V RRIH++ + + TYDT GP Q I +
Sbjct: 5 FNTLFPSSTKEYISGTIYNN---IKVGMRRIHINDNSESILTYDTGGPHTDQKIKIDINQ 61
Query: 141 GLPKLRKDWI-DRRE 154
G+ K+R +WI DR++
Sbjct: 62 GIEKIRLNWIVDRQD 76
Score = 72 (30.4 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 162 TQMYYAKQGVITEEMLYCATRE 183
TQMYYA+ +IT EM Y A RE
Sbjct: 110 TQMYYARNNIITPEMEYVAIRE 131
>TIGR_CMR|CBU_0330 [details] [associations]
symbol:CBU_0330 "thiamine biosynthesis protein ThiC"
species:227377 "Coxiella burnetii RSA 493" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0009228 "thiamine biosynthetic process"
evidence=ISS] HAMAP:MF_00089 InterPro:IPR002817 Pfam:PF01964
UniPathway:UPA00060 GO:GO:0046872 GO:GO:0051539 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009228 GO:GO:0009229 GO:GO:0016829
eggNOG:COG0422 HOGENOM:HOG000224484 KO:K03147 OMA:IAENLTW
ProtClustDB:PRK09284 InterPro:IPR025747 Pfam:PF13667
TIGRFAMs:TIGR00190 RefSeq:NP_819372.2 ProteinModelPortal:Q83EJ0
GeneID:1208212 KEGG:cbu:CBU_0330 PATRIC:17929353
BioCyc:CBUR227377:GJ7S-335-MONOMER Uniprot:Q83EJ0
Length = 554
Score = 1512 (537.3 bits), Expect = 2.7e-167, Sum P(2) = 2.7e-167
Identities = 288/401 (71%), Positives = 328/401 (81%)
Query: 185 LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244
+ PEF+R E+A GRAI+P+N H E EPMI+GR+FLVKVNANIGNS++ SS+EEEV K+
Sbjct: 147 ITPEFIRNEIACGRAILPANINHPESEPMIIGRHFLVKVNANIGNSSLTSSVEEEVEKLI 206
Query: 245 WATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRD 304
WA WGADTVMDLSTG+ I E RE ILR+S VP+GTVP+Y+ALEKVDG + L+WE+FRD
Sbjct: 207 WALRWGADTVMDLSTGKKIKEIRETILRHSPVPIGTVPLYEALEKVDGDVKALTWEIFRD 266
Query: 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD 364
TLI QAEQGVDYFTIHAGVL R+IPLT KR+TGIVSRGGS+ AKWCL + +ENF Y H+
Sbjct: 267 TLISQAEQGVDYFTIHAGVLNRFIPLTQKRVTGIVSRGGSLMAKWCLLHREENFLYTHFT 326
Query: 365 EILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424
EI +I YDV+ S+GDGLRPGSI DAND AQFAEL QGEL R AW VQVMNEGPGH
Sbjct: 327 EICEIMRAYDVSFSLGDGLRPGSIADANDEAQFAELKIQGELNRIAWKYGVQVMNEGPGH 386
Query: 425 IPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVT 484
IP++ I ENM KQL +C EAPFYTLGPLTTDIAPGYDHI SAIGAA I G ALLCYVT
Sbjct: 387 IPLNLIEENMTKQLAYCREAPFYTLGPLTTDIAPGYDHIGSAIGAAFIAWQGCALLCYVT 446
Query: 485 PKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSL 544
PKEHLGLPN+ DVK G+IAYKIAAHAADLAKGHP A+ D LS+ARFEFRW DQF L+L
Sbjct: 447 PKEHLGLPNKQDVKEGLIAYKIAAHAADLAKGHPAARQRDYLLSQARFEFRWHDQFNLAL 506
Query: 545 DPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVR 585
D TA FHDETLP E AK AHFCS+CGPKFC+ K + +VR
Sbjct: 507 DAETARLFHDETLPKEAAKHAHFCSLCGPKFCAYKTSHEVR 547
Score = 137 (53.3 bits), Expect = 2.7e-167, Sum P(2) = 2.7e-167
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 109 LQVPFRRIHLSGDEPNFDTYDTSGPQ---NISPRV--GLPKLRKDWIDRREKLGAPRYTQ 163
++V R I L+ + + YDTSGP NIS + GLP+LR+ WI R PR TQ
Sbjct: 43 IRVGMREIQLTNGD-SLTLYDTSGPYSDPNISIKSPQGLPRLREPWIKVR-----PRKTQ 96
Query: 164 MYYAKQGVITEEMLYCATRE 183
+ +AK+GVIT EM Y A RE
Sbjct: 97 LAFAKEGVITPEMEYAAIRE 116
>TIGR_CMR|APH_0600 [details] [associations]
symbol:APH_0600 "thiamine biosynthesis protein ThiC"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
GO:GO:0051539 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 RefSeq:YP_505190.1
ProteinModelPortal:Q2GKB1 STRING:Q2GKB1 GeneID:3931309
KEGG:aph:APH_0600 PATRIC:20949862 eggNOG:COG0422
HOGENOM:HOG000224484 KO:K03147 OMA:IAENLTW ProtClustDB:PRK09284
BioCyc:APHA212042:GHPM-624-MONOMER InterPro:IPR025747 Pfam:PF13667
TIGRFAMs:TIGR00190 Uniprot:Q2GKB1
Length = 557
Score = 1479 (525.7 bits), Expect = 2.0e-165, Sum P(3) = 2.0e-165
Identities = 285/407 (70%), Positives = 333/407 (81%)
Query: 176 MLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASS 235
+L TR K+ PEFVR EVA GRA+IPSN H E EPMI+GRNFLVK+NANIGNSAV S+
Sbjct: 148 LLPTKTR-KITPEFVREEVACGRAVIPSNINHPESEPMIIGRNFLVKINANIGNSAVLSN 206
Query: 236 IEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAE 295
IE+EV K+ A +GADTVMDLSTG IH RE I+RNS VP+GTVPIYQAL KV+GI
Sbjct: 207 IEDEVKKMVLAVTYGADTVMDLSTGHDIHNIRELIVRNSPVPIGTVPIYQALNKVNGIVG 266
Query: 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHK 355
+LS+EVF++T+IEQAEQGVDYFTIHAGVL YI T R TGIVSRGG+I A+WCL ++K
Sbjct: 267 DLSFEVFKETIIEQAEQGVDYFTIHAGVLKSYIEHTRSRTTGIVSRGGAIMAQWCLLHNK 326
Query: 356 ENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDV 415
ENF YE+++EI +I YDV S+GDGLRPGSI DAND AQF EL T GEL + A D
Sbjct: 327 ENFLYENFEEICEIMRSYDVTFSLGDGLRPGSINDANDVAQFLELRTLGELVKIARAHDC 386
Query: 416 QVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGAL 475
QV+ EGPGH+PMH I EN++KQL++C+EAPFYTLGPLTTDIAPGYDHITSAIGAA IG
Sbjct: 387 QVIVEGPGHVPMHLIEENVKKQLDFCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWY 446
Query: 476 GTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFR 535
GTA+LCYVTPKEHLGLPN +DVKAGVI+YKIAAHAADLAKG+P + D ALS+AR++FR
Sbjct: 447 GTAMLCYVTPKEHLGLPNAEDVKAGVISYKIAAHAADLAKGNPASFARDYALSQARYDFR 506
Query: 536 WMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITE 582
W DQF LS+DP TA HDE+LP +G K AHFCSMCGPKFCSMK+++
Sbjct: 507 WEDQFNLSIDPATAKKLHDESLPGKGGKTAHFCSMCGPKFCSMKLSK 553
Score = 87 (35.7 bits), Expect = 2.0e-165, Sum P(3) = 2.0e-165
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 157 GAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELE 211
GAP TQ++YAK+G+IT EM Y A RE E +AE G ++P+ + + E
Sbjct: 109 GAP-VTQLFYAKKGIITPEMEYVAVRENALLE--QAEAIPG-LLLPTKTRKITPE 159
Score = 81 (33.6 bits), Expect = 2.0e-165, Sum P(3) = 2.0e-165
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 85 SFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSGDEPNFDTYDTSGPQN-----ISPR 139
+ + +P S+K Y T ++V R+I++ F YDT+GP ++
Sbjct: 4 NISEIYPSSNKIYINCTLYPD---VKVGMRQINIRNSSQRFLLYDTAGPYTDCDIKVNLT 60
Query: 140 VGLPKLRKDWIDRR 153
G+ +R+DWI RR
Sbjct: 61 EGISSIRRDWIARR 74
>TIGR_CMR|DET_0775 [details] [associations]
symbol:DET_0775 "thiamine biosynthesis protein ThiC"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
GO:GO:0051539 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 KO:K03147
TIGRFAMs:TIGR00190 HOGENOM:HOG000224483 OMA:VHCGVTR
ProtClustDB:PRK13352 RefSeq:YP_181507.1 ProteinModelPortal:Q3Z8E2
STRING:Q3Z8E2 GeneID:3229896 KEGG:det:DET0775 PATRIC:21608611
BioCyc:DETH243164:GJNF-776-MONOMER Uniprot:Q3Z8E2
Length = 431
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 208/427 (48%), Positives = 270/427 (63%)
Query: 162 TQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLV 221
TQ+ A++ +IT M A E L PEF+ VA G +IP+NK L+ +G+
Sbjct: 2 TQLKQARKNIITPGMKAIAKIEGLPPEFICQGVADGNIVIPANKLRKNLKLCGIGKGLST 61
Query: 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTV 281
KVNANIG S ++E EV K++ A M GADT+MDLSTG I+ R+ IL+N+ +P+GTV
Sbjct: 62 KVNANIGTSTDFGTVESEVEKLKMAEMAGADTIMDLSTGPKINSVRQSILKNTCLPLGTV 121
Query: 282 PIYQA-LEKVD--GIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAK---RM 335
P+YQA +E D G ++ + + QA++GVD+ T+H GV + I T K R+
Sbjct: 122 PVYQAAVEAKDRYGAMVKMTADDLFSAIESQAKEGVDFVTVHCGVTRQVID-TFKGQGRL 180
Query: 336 TGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTA 395
T IVSRGG+ A W + + EN YEH+D +LDIC +YDV LS+GDGLRPG I DA D A
Sbjct: 181 TDIVSRGGTFTAGWMVFHQAENPLYEHFDHLLDICREYDVTLSLGDGLRPGCIADATDRA 240
Query: 396 QFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTD 455
Q AELL GEL +RA + +VQVM EGPGH+P+++I N++ Q C +APFY LGPL TD
Sbjct: 241 QVAELLVLGELVKRAREAEVQVMVEGPGHVPLNQIEANIRLQKSVCEDAPFYVLGPLVTD 300
Query: 456 IAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAK 515
IAPGYDHIT AIG A A G LCYVTP EHL LP+ DV+ GVIA +IAAHAAD+ K
Sbjct: 301 IAPGYDHITGAIGGAVAAAAGADFLCYVTPAEHLSLPDVTDVRNGVIASRIAAHAADIVK 360
Query: 516 GHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKF 575
G A D ++ AR + W Q LSLDP A D ++G CSMCG F
Sbjct: 361 GVNGAAERDRQMAIARKKLDWDSQLNLSLDPEHAKLTRDR-FKTKGKA----CSMCGD-F 414
Query: 576 CSMKITE 582
C+M++ E
Sbjct: 415 CAMELAE 421
>TIGR_CMR|CHY_0747 [details] [associations]
symbol:CHY_0747 "thiamine biosynthesis protein ThiC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009228
"thiamine biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 KO:K03147
TIGRFAMs:TIGR00190 HOGENOM:HOG000224483 OMA:VHCGVTR
ProtClustDB:PRK13352 RefSeq:YP_359601.1 ProteinModelPortal:Q3AE33
STRING:Q3AE33 GeneID:3726669 KEGG:chy:CHY_0747 PATRIC:21274628
BioCyc:CHYD246194:GJCN-747-MONOMER Uniprot:Q3AE33
Length = 429
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 205/427 (48%), Positives = 266/427 (62%)
Query: 162 TQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLV 221
TQ+ AK+GVIT EM A E+ PE +R +VA G +IP+N H L P +G V
Sbjct: 2 TQLLKAKEGVITREMEVVAAEERKSPEEIRQKVALGEVVIPANVNHQNLHPKGIGAGLKV 61
Query: 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTV 281
KVNAN+G S E+E+ KV+ A GAD +MDLSTG ++ E R I++ S+VPVGTV
Sbjct: 62 KVNANLGTSENRCFYEDELKKVKVAIKAGADAIMDLSTGGNLDEIRRAIIKESSVPVGTV 121
Query: 282 PIYQAL-EKVD--GIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAK--RMT 336
P+YQA E ++ G L E+ D + +QA GVD+ T+H GV + + + R+T
Sbjct: 122 PLYQAAAETLNKYGDISRLDPELLFDVIEKQAADGVDFMTVHVGVTREILKVLDRFPRVT 181
Query: 337 GIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQ 396
+VSRGGS+ W +EN YE +D +L IC +YDV LS+GDGLRPGSI DA D Q
Sbjct: 182 EVVSRGGSLTIAWMEKNGRENPLYEQFDRLLAICRKYDVTLSLGDGLRPGSIADATDQLQ 241
Query: 397 FAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDI 456
EL+ GEL + A ++ VQVM EGPGH+P+++I N++ C APFY LGPL TDI
Sbjct: 242 IMELMKLGELVKYAQNQGVQVMVEGPGHVPINQIEMNVKLMKRLCANAPFYVLGPLVTDI 301
Query: 457 APGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKG 516
APGYDHIT+AIG A G LCYVTP EHLGLP +DV+ GVIA KIAAHAADLA+G
Sbjct: 302 APGYDHITAAIGGAWAAYFGADFLCYVTPAEHLGLPTVEDVEEGVIALKIAAHAADLARG 361
Query: 517 HPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFC 576
+ A D +S AR E W QF L+++P A E G++ CSMCG + C
Sbjct: 362 NREAWNRDYEMSVARKELNWERQFELAINPERARKMRIE----RGSQDIKSCSMCG-ELC 416
Query: 577 SMKITED 583
+MKI +
Sbjct: 417 AMKIMNE 423
>TIGR_CMR|GSU_0604 [details] [associations]
symbol:GSU_0604 "thiamine biosynthesis protein ThiC"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
GO:GO:0008270 GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0009228 GO:GO:0009229 GO:GO:0016829 KO:K03147
TIGRFAMs:TIGR00190 HOGENOM:HOG000224483 OMA:VHCGVTR
ProtClustDB:PRK13352 RefSeq:NP_951662.1 GeneID:2687308
KEGG:gsu:GSU0604 PATRIC:22023959 BioCyc:GSUL243231:GH27-589-MONOMER
Uniprot:Q74FK3
Length = 436
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 199/430 (46%), Positives = 265/430 (61%)
Query: 162 TQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLV 221
TQ+ YA+ G+IT++M A E + PEF++A +A G II N KH P+ VG
Sbjct: 4 TQLEYARNGIITDKMKEAALAEGVSPEFIKAGIADGTIIICHNNKHHNGRPLAVGTGLRT 63
Query: 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTV 281
KVNANIG SA + I +E+ K + A GAD +MDLSTG + E R I+ + +G+V
Sbjct: 64 KVNANIGTSADDTDITKELEKARVAVRHGADAIMDLSTGGPVDEIRRAIIAETNACIGSV 123
Query: 282 PIYQA-LEKV----DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAK--R 334
P+YQA L+ V I + ++F + +I+ AE GVD+ T+H GV + R
Sbjct: 124 PLYQAALDAVRTKKKAIVDMTVDDIF-EGIIKHAEDGVDFITVHCGVTRATVERMKNEGR 182
Query: 335 MTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDT 394
+ +VSRGG+ +W + EN +EH+D +LDI YD+ LS+GDG RPG + DA D
Sbjct: 183 IMDVVSRGGAFTVEWMTYNNAENPLFEHFDRLLDIVKAYDMTLSLGDGFRPGCLADATDR 242
Query: 395 AQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTT 454
AQ EL+ GELT+RA D VQVM EGPGH+P+++I N+ Q C+ APFY LGPL T
Sbjct: 243 AQIHELILLGELTQRAQDVGVQVMIEGPGHVPLNQIEANILLQKRLCHGAPFYVLGPLVT 302
Query: 455 DIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLA 514
DIAPGYDHIT AIG A A G LCYVTP EHL LP+ +DV+ GVIA +IAAHAAD+A
Sbjct: 303 DIAPGYDHITCAIGGAIAAAAGADFLCYVTPSEHLRLPSVEDVREGVIASRIAAHAADIA 362
Query: 515 KGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSE-GAKVAHFCSMCGP 573
KG A D A++K R + W QF +LDP A DE+ +E GA C+MCG
Sbjct: 363 KGVKGAMAKDIAMAKCRKKLDWEGQFEQALDPEKARRMRDESGVAEHGA-----CTMCG- 416
Query: 574 KFCSMKITED 583
+FC+ K+ +D
Sbjct: 417 EFCAYKVMDD 426
>TIGR_CMR|CJE_0503 [details] [associations]
symbol:CJE_0503 "thiamine biosynthesis protein ThiC"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0009228 "thiamine biosynthetic process"
evidence=ISS] HAMAP:MF_00089 InterPro:IPR002817 Pfam:PF01964
UniPathway:UPA00060 GO:GO:0046872 GO:GO:0051539 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0009228 GO:GO:0009229 GO:GO:0016829
eggNOG:COG0422 KO:K03147 TIGRFAMs:TIGR00190 RefSeq:YP_178521.1
STRING:Q5HW14 GeneID:3231264 KEGG:cjr:CJE0503 PATRIC:20042718
HOGENOM:HOG000224483 OMA:VHCGVTR ProtClustDB:PRK13352
BioCyc:CJEJ195099:GJC0-513-MONOMER Uniprot:Q5HW14
Length = 430
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 189/427 (44%), Positives = 259/427 (60%)
Query: 162 TQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLV 221
TQM YAK+G+ T+EM A +E L +F+ +A G+ IIP+N H L+P +G
Sbjct: 3 TQMNYAKEGIFTKEMQIVAQKENLSKDFLLENIACGKIIIPANINHKSLDPNGIGFGLRT 62
Query: 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTV 281
KVN N+G S EE+ KV+ A + + +MDLS R+ ++ S +GTV
Sbjct: 63 KVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYGKTSRFRDELVNVSKAMIGTV 122
Query: 282 PIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLR--YIPLTAKRMTGIV 339
P+Y A+ ++ + + + F D + A+ GVD+ TIHAG+ R +I +KR+T IV
Sbjct: 123 PVYDAVGFLEKDLKQIGAKDFLDVVYHHAKSGVDFMTIHAGINSRAAHIFKQSKRLTNIV 182
Query: 340 SRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE 399
SRGGS+ W + EN +E++D++LDIC +YDV LS+GD LRPGS +DA+D AQ +E
Sbjct: 183 SRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDVTLSLGDALRPGSTHDASDGAQISE 242
Query: 400 LLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPG 459
L+ LT+RAWD VQVM EGPGH+ +++I NMQ + C APFY LGPL TDI G
Sbjct: 243 LIELSLLTQRAWDVGVQVMIEGPGHMAINEIEANMQLEKRLCKGAPFYVLGPLVTDIGAG 302
Query: 460 YDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPL 519
YDHI+ AIG A A G +LCYVTP EHL LPN +DV+ G++A KIAAHA D+AK P
Sbjct: 303 YDHISGAIGGAVAAASGADMLCYVTPAEHLRLPNLEDVREGIVATKIAAHAGDIAK-LPK 361
Query: 520 AQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMK 579
+ DD +SKAR E W F L++D A +E P + + CSMCG K C+M
Sbjct: 362 ERARDDEMSKARQEIDWEKMFKLAIDGEKAKKMFNERRPDD----LNSCSMCG-KMCAMN 416
Query: 580 ITEDVRK 586
+ K
Sbjct: 417 TMNQILK 423
>TIGR_CMR|GSU_3005 [details] [associations]
symbol:GSU_3005 "thiamine biosynthesis protein ThiC"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00089
InterPro:IPR002817 Pfam:PF01964 UniPathway:UPA00060 GO:GO:0046872
GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009228
GO:GO:0009229 GO:GO:0016829 eggNOG:COG0422 KO:K03147
TIGRFAMs:TIGR00190 HOGENOM:HOG000224483 ProtClustDB:PRK13352
RefSeq:NP_954047.1 GeneID:2688215 KEGG:gsu:GSU3005 PATRIC:22028869
OMA:ICYITPA BioCyc:GSUL243231:GH27-2981-MONOMER Uniprot:P61425
Length = 435
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/425 (38%), Positives = 239/425 (56%)
Query: 162 TQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMI-VGRNFL 220
TQ+ A++G+IT +M A E + PE+V VA G+ +IP N H+ + +G+
Sbjct: 3 TQIEQAREGIITPQMAAVAAEEHVSPEYVCRMVAEGKVVIPWN--HVRAPKAVGIGKGLR 60
Query: 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGT 280
KVNA+IG S+ E EV K + A GADT+M+LS G + R ++ +PVG
Sbjct: 61 TKVNASIGTSSDIVDYEAEVRKARAAQESGADTLMELSVGGDLDRVRREVIAAVDLPVGN 120
Query: 281 VPIYQAL---EKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAK---R 334
VP+YQA + G L E+ D + Q G+ + +H G+ L I + R
Sbjct: 121 VPLYQAFCEAARKYGDPNRLDPEMLFDLIERQCADGMAFMAVHCGINLYTIERLRRQGYR 180
Query: 335 MTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDT 394
G+VS+GG W +A +EN YE +D ++ I +YD LS+G+GLR G+I+D++D
Sbjct: 181 YGGLVSKGGVSMVGWMMANGRENPLYEQFDRVVGILKKYDTVLSLGNGLRAGAIHDSSDR 240
Query: 395 AQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTT 454
AQ ELL EL + Q++ EGPGH+P+ ++ N+Q Q AP+Y LGP++T
Sbjct: 241 AQIQELLINCELAEMGREMGCQMLVEGPGHVPLDEVEGNIQLQKRMSGGAPYYMLGPIST 300
Query: 455 DIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLA 514
D+APG+DHIT+AIGAA G L+CY+TP EHL LPN +DV+ GV A ++AA+ D+
Sbjct: 301 DVAPGFDHITAAIGAAQSSRFGADLICYITPAEHLALPNEEDVRQGVKAARVAAYIGDMN 360
Query: 515 KGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPK 574
K + D +SKAR + W QF L+L P A + P + A C+MCG
Sbjct: 361 KYPEKGRERDREMSKARRDLDWQRQFELALYPEDARAIRASRTPEDEAT----CTMCGD- 415
Query: 575 FCSMK 579
FC+ +
Sbjct: 416 FCASR 420
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 667 667 0.00098 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 630 (67 KB)
Total size of DFA: 392 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.96u 0.17s 56.13t Elapsed: 00:00:03
Total cpu time: 55.97u 0.17s 56.14t Elapsed: 00:00:03
Start: Sat May 11 00:31:40 2013 End: Sat May 11 00:31:43 2013