Query 005965
Match_columns 667
No_of_seqs 320 out of 707
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 12:19:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3epo_A Thiamine biosynthesis p 100.0 5E-246 2E-250 1940.7 47.1 529 86-634 15-611 (612)
2 3lmz_A Putative sugar isomeras 93.7 0.2 6.7E-06 47.2 8.3 88 219-322 16-111 (257)
3 3p6l_A Sugar phosphate isomera 93.5 0.29 1E-05 45.9 9.1 69 242-322 27-113 (262)
4 3noy_A 4-hydroxy-3-methylbut-2 92.7 5.7 0.00019 42.3 18.2 208 212-485 23-246 (366)
5 2h9a_B CO dehydrogenase/acetyl 91.1 1.2 4.2E-05 45.7 10.8 125 300-439 74-229 (310)
6 1i60_A IOLI protein; beta barr 90.8 3.4 0.00012 38.3 12.6 39 402-440 124-164 (278)
7 2q02_A Putative cytoplasmic pr 89.5 0.88 3E-05 42.4 7.6 76 241-323 23-108 (272)
8 3f4w_A Putative hexulose 6 pho 87.9 2.6 8.9E-05 38.8 9.5 173 230-484 6-188 (211)
9 3kws_A Putative sugar isomeras 87.7 2.8 9.7E-05 39.7 9.9 92 220-323 25-127 (287)
10 2h9a_A Carbon monoxide dehydro 87.2 0.96 3.3E-05 48.7 7.0 114 361-492 187-302 (445)
11 3iix_A Biotin synthetase, puta 87.1 4.8 0.00016 39.7 11.4 50 296-378 83-134 (348)
12 3b0p_A TRNA-dihydrouridine syn 86.8 5.2 0.00018 40.9 11.9 126 222-384 59-207 (350)
13 1ub3_A Aldolase protein; schif 86.2 0.97 3.3E-05 44.2 5.9 117 220-344 54-185 (220)
14 3khj_A Inosine-5-monophosphate 85.7 5.1 0.00018 41.6 11.3 69 223-319 98-172 (361)
15 2yzr_A Pyridoxal biosynthesis 85.7 1.6 5.6E-05 45.7 7.6 80 240-321 27-149 (330)
16 3tva_A Xylose isomerase domain 84.5 2.8 9.6E-05 39.7 8.1 115 242-382 26-160 (290)
17 2rdx_A Mandelate racemase/muco 83.0 4.5 0.00015 41.2 9.3 26 297-322 144-169 (379)
18 2i6j_A Ssoptp, sulfolobus solf 82.1 4.3 0.00015 35.3 7.7 73 300-408 79-151 (161)
19 3ctl_A D-allulose-6-phosphate 81.2 3 0.0001 40.8 7.0 81 222-323 2-90 (231)
20 1q7z_A 5-methyltetrahydrofolat 81.1 11 0.00038 41.5 12.1 119 298-427 338-479 (566)
21 1f6y_A 5-methyltetrahydrofolat 80.4 8 0.00027 38.5 9.9 141 296-442 21-185 (262)
22 3gnh_A L-lysine, L-arginine ca 79.5 7.4 0.00025 38.0 9.2 116 243-379 94-225 (403)
23 2zvr_A Uncharacterized protein 79.3 32 0.0011 32.6 13.3 87 300-422 41-133 (290)
24 1muw_A Xylose isomerase; atomi 79.1 3.8 0.00013 41.6 7.2 117 241-382 37-182 (386)
25 4fo4_A Inosine 5'-monophosphat 79.0 4.1 0.00014 42.6 7.6 106 170-319 56-176 (366)
26 3aam_A Endonuclease IV, endoiv 78.7 2.2 7.5E-05 40.1 5.0 109 241-382 18-141 (270)
27 2rdx_A Mandelate racemase/muco 78.6 25 0.00086 35.7 13.1 163 220-439 134-310 (379)
28 2pgw_A Muconate cycloisomerase 78.0 37 0.0013 34.6 14.1 150 220-421 136-299 (384)
29 2qgy_A Enolase from the enviro 77.9 41 0.0014 34.5 14.4 152 220-422 135-304 (391)
30 2yci_X 5-methyltetrahydrofolat 77.7 15 0.0005 36.9 10.8 184 297-519 31-240 (271)
31 1bf6_A Phosphotriesterase homo 77.1 48 0.0017 31.0 14.3 109 237-382 33-161 (291)
32 1r30_A Biotin synthase; SAM ra 76.7 13 0.00043 37.5 10.2 28 295-322 97-124 (369)
33 3b0p_A TRNA-dihydrouridine syn 76.7 19 0.00064 36.9 11.5 192 298-530 68-299 (350)
34 3p6l_A Sugar phosphate isomera 75.3 13 0.00043 34.7 9.1 78 295-422 58-136 (262)
35 3obe_A Sugar phosphate isomera 74.9 11 0.00037 36.9 8.9 93 298-421 77-170 (305)
36 3r2g_A Inosine 5'-monophosphat 74.5 85 0.0029 32.9 15.9 85 219-322 37-121 (361)
37 1i60_A IOLI protein; beta barr 74.3 35 0.0012 31.5 11.7 60 361-424 46-107 (278)
38 3r2g_A Inosine 5'-monophosphat 74.0 13 0.00045 39.0 9.7 103 170-319 52-168 (361)
39 4fxs_A Inosine-5'-monophosphat 73.5 9.4 0.00032 41.1 8.7 77 218-319 217-299 (496)
40 3kws_A Putative sugar isomeras 73.1 41 0.0014 31.7 12.1 90 301-427 39-130 (287)
41 2a4a_A Deoxyribose-phosphate a 72.7 3.5 0.00012 42.1 4.9 98 216-322 85-194 (281)
42 3be7_A Zn-dependent arginine c 72.6 42 0.0014 32.9 12.4 113 242-378 92-223 (408)
43 1xla_A D-xylose isomerase; iso 72.6 7.9 0.00027 39.5 7.5 116 241-381 37-181 (394)
44 1aj0_A DHPS, dihydropteroate s 71.7 27 0.00093 35.3 11.1 132 362-509 121-271 (282)
45 3lmz_A Putative sugar isomeras 71.5 22 0.00076 33.2 9.8 63 360-438 88-152 (257)
46 2ps2_A Putative mandelate race 71.4 38 0.0013 34.3 12.1 164 221-439 136-312 (371)
47 2vp8_A Dihydropteroate synthas 71.3 19 0.00064 37.3 10.0 132 364-509 150-303 (318)
48 3ayv_A Putative uncharacterize 71.3 3 0.0001 38.8 3.8 63 300-382 76-138 (254)
49 2o7s_A DHQ-SDH PR, bifunctiona 71.2 6.8 0.00023 41.9 7.0 88 233-326 13-105 (523)
50 1tx2_A DHPS, dihydropteroate s 70.8 76 0.0026 32.4 14.2 123 364-509 149-290 (297)
51 3ffs_A Inosine-5-monophosphate 70.1 19 0.00065 38.2 9.9 73 221-320 135-212 (400)
52 4gmf_A Yersiniabactin biosynth 70.0 1.6 5.3E-05 45.3 1.7 38 334-376 33-70 (372)
53 2yr1_A 3-dehydroquinate dehydr 68.3 7.6 0.00026 38.5 6.1 104 210-322 10-123 (257)
54 3feq_A Putative amidohydrolase 68.3 17 0.00058 35.7 8.6 116 241-379 92-230 (423)
55 1wa3_A 2-keto-3-deoxy-6-phosph 68.1 43 0.0015 30.6 10.8 151 235-484 20-179 (205)
56 1n7k_A Deoxyribose-phosphate a 67.4 5 0.00017 39.8 4.6 93 221-323 72-171 (234)
57 2p8b_A Mandelate racemase/muco 67.1 1.1E+02 0.0037 30.8 14.4 149 235-439 141-310 (369)
58 3tva_A Xylose isomerase domain 66.8 17 0.00058 34.3 8.0 71 360-439 101-173 (290)
59 2nql_A AGR_PAT_674P, isomerase 66.8 26 0.00091 35.8 10.0 163 220-439 152-331 (388)
60 3cny_A Inositol catabolism pro 66.3 7.5 0.00026 36.6 5.4 80 235-322 32-112 (301)
61 3pnz_A Phosphotriesterase fami 66.3 76 0.0026 32.4 13.2 89 234-323 43-152 (330)
62 4djd_D C/Fe-SP, corrinoid/iron 66.2 27 0.00091 36.3 9.9 172 299-486 79-305 (323)
63 3i6e_A Muconate cycloisomerase 66.1 1E+02 0.0035 31.7 14.2 157 221-439 138-316 (385)
64 3o1n_A 3-dehydroquinate dehydr 64.9 6.9 0.00024 39.4 5.1 100 211-321 31-141 (276)
65 1jcn_A Inosine monophosphate d 64.2 38 0.0013 36.0 10.9 119 218-384 241-368 (514)
66 3tr9_A Dihydropteroate synthas 64.1 40 0.0014 34.9 10.7 210 234-510 46-289 (314)
67 1ccw_B Protein (glutamate muta 63.9 6.8 0.00023 43.0 5.1 303 185-539 47-385 (483)
68 1tzz_A Hypothetical protein L1 63.8 18 0.00061 37.1 8.0 114 281-455 133-267 (392)
69 2c46_A MRNA capping enzyme; ph 63.8 20 0.00068 34.9 8.0 112 247-402 79-197 (241)
70 4erc_A Dual specificity protei 63.3 24 0.00083 30.1 7.6 119 237-403 25-145 (150)
71 2qw5_A Xylose isomerase-like T 63.2 64 0.0022 31.4 11.5 97 301-426 32-133 (335)
72 1eep_A Inosine 5'-monophosphat 63.2 69 0.0024 33.0 12.3 73 223-319 144-221 (404)
73 3l9c_A 3-dehydroquinate dehydr 62.9 8.3 0.00028 38.6 5.2 108 211-329 26-139 (259)
74 2qdd_A Mandelate racemase/muco 62.7 20 0.00068 36.5 8.1 27 297-323 144-170 (378)
75 3ngj_A Deoxyribose-phosphate a 62.6 13 0.00044 37.2 6.5 97 219-323 77-180 (239)
76 1fpz_A Cyclin-dependent kinase 62.5 39 0.0013 31.3 9.4 125 235-407 59-196 (212)
77 2ps2_A Putative mandelate race 61.3 18 0.00061 36.7 7.4 25 298-322 146-170 (371)
78 3tn4_A Phosphotriesterase; lac 61.2 13 0.00045 38.6 6.6 81 239-324 85-178 (360)
79 1vcv_A Probable deoxyribose-ph 61.1 10 0.00035 37.4 5.5 94 221-323 51-151 (226)
80 3qc0_A Sugar isomerase; TIM ba 60.9 33 0.0011 31.7 8.6 63 361-426 45-108 (275)
81 2oo0_A ODC, ornithine decarbox 60.8 1.5E+02 0.0053 31.3 14.7 101 297-424 182-287 (471)
82 3ovp_A Ribulose-phosphate 3-ep 60.7 9.4 0.00032 37.1 5.1 85 219-322 3-96 (228)
83 2c6q_A GMP reductase 2; TIM ba 60.5 1.6E+02 0.0054 30.3 14.3 74 223-319 109-188 (351)
84 3oa3_A Aldolase; structural ge 60.3 14 0.00047 38.1 6.4 93 220-322 109-210 (288)
85 3paj_A Nicotinate-nucleotide p 60.0 11 0.00039 39.1 5.8 59 243-319 244-302 (320)
86 3cqj_A L-ribulose-5-phosphate 59.7 1.2E+02 0.004 28.7 14.8 123 297-440 63-186 (295)
87 2og9_A Mandelate racemase/muco 59.5 1.5E+02 0.0053 30.3 14.1 181 165-419 116-314 (393)
88 1p1x_A Deoxyribose-phosphate a 59.3 6.7 0.00023 39.5 3.8 96 220-323 68-173 (260)
89 3rhg_A Putative phophotriester 59.1 55 0.0019 33.8 10.7 80 233-315 71-155 (365)
90 3ngf_A AP endonuclease, family 58.7 58 0.002 30.5 10.0 78 359-440 91-175 (269)
91 3rz2_A Protein tyrosine phosph 58.7 81 0.0028 28.7 10.7 120 234-402 48-171 (189)
92 1jub_A Dihydroorotate dehydrog 58.6 23 0.00079 34.8 7.5 79 234-323 103-195 (311)
93 2img_A Dual specificity protei 58.5 35 0.0012 29.0 7.8 111 236-391 25-137 (151)
94 1eye_A DHPS 1, dihydropteroate 58.5 28 0.00096 35.2 8.2 131 364-508 114-268 (280)
95 3k2g_A Resiniferatoxin-binding 58.3 78 0.0027 32.7 11.7 79 234-315 83-166 (364)
96 3inp_A D-ribulose-phosphate 3- 57.4 14 0.00048 36.7 5.7 85 221-324 28-120 (246)
97 4avf_A Inosine-5'-monophosphat 57.3 19 0.00064 38.7 7.1 77 218-319 215-297 (490)
98 2ob3_A Parathion hydrolase; me 57.2 13 0.00046 37.1 5.7 109 242-380 52-167 (330)
99 3r12_A Deoxyribose-phosphate a 56.6 11 0.00037 38.2 4.9 98 219-322 93-195 (260)
100 2qul_A D-tagatose 3-epimerase; 56.4 41 0.0014 31.4 8.5 90 302-424 19-110 (290)
101 2zad_A Muconate cycloisomerase 55.6 58 0.002 32.6 9.9 92 298-439 139-233 (345)
102 1sfl_A 3-dehydroquinate dehydr 55.6 10 0.00034 37.1 4.3 85 235-323 15-107 (238)
103 4e4u_A Mandalate racemase/muco 55.5 2E+02 0.0068 30.0 15.7 41 220-261 124-169 (412)
104 2r8c_A Putative amidohydrolase 55.5 29 0.001 34.5 7.7 77 243-321 94-196 (426)
105 2qdd_A Mandelate racemase/muco 55.5 41 0.0014 34.2 8.9 78 356-439 220-310 (378)
106 3k13_A 5-methyltetrahydrofolat 55.4 36 0.0012 34.9 8.5 126 296-428 33-185 (300)
107 3gnn_A Nicotinate-nucleotide p 55.2 9.9 0.00034 39.2 4.4 61 243-321 222-282 (298)
108 1tkk_A Similar to chloromucona 54.8 1.8E+02 0.0061 29.2 15.2 142 235-424 140-299 (366)
109 1mdl_A Mandelate racemase; iso 54.8 1.8E+02 0.0061 29.2 13.8 149 221-422 134-299 (359)
110 3qc0_A Sugar isomerase; TIM ba 54.8 69 0.0024 29.5 9.6 79 360-440 82-168 (275)
111 2qjg_A Putative aldolase MJ040 54.7 39 0.0013 32.4 8.2 70 238-319 166-236 (273)
112 1w8s_A FBP aldolase, fructose- 54.7 48 0.0016 32.7 9.0 180 280-482 20-230 (263)
113 2zc8_A N-acylamino acid racema 54.6 1.8E+02 0.0062 29.2 13.9 148 235-439 141-305 (369)
114 3ngf_A AP endonuclease, family 54.6 1.2E+02 0.0039 28.5 11.3 65 362-427 49-118 (269)
115 2fli_A Ribulose-phosphate 3-ep 54.3 20 0.00069 33.0 6.0 75 234-324 13-95 (220)
116 1to3_A Putative aldolase YIHT; 54.3 39 0.0013 34.3 8.5 114 304-452 112-231 (304)
117 3u0h_A Xylose isomerase domain 53.8 23 0.00078 32.9 6.2 78 360-440 83-169 (281)
118 1eix_A Orotidine 5'-monophosph 53.6 38 0.0013 32.9 8.0 27 300-326 79-105 (245)
119 1xim_A D-xylose isomerase; iso 53.0 53 0.0018 33.4 9.3 124 235-381 34-181 (393)
120 2pgw_A Muconate cycloisomerase 53.0 1.2E+02 0.004 30.9 11.8 26 297-322 146-171 (384)
121 2hzg_A Mandelate racemase/muco 52.9 2.1E+02 0.007 29.4 14.7 153 234-439 144-319 (401)
122 2e0t_A Dual specificity phosph 52.8 54 0.0019 28.3 8.1 96 246-372 23-124 (151)
123 1yn9_A BVP, polynucleotide 5'- 52.6 43 0.0015 29.8 7.6 122 222-389 32-159 (169)
124 2lp1_A C99; alzheimer'S D memb 57.9 2.9 0.0001 38.5 0.0 35 349-383 81-115 (122)
125 2vef_A Dihydropteroate synthas 52.4 48 0.0016 34.0 8.9 152 235-440 31-220 (314)
126 3cny_A Inositol catabolism pro 52.4 87 0.003 29.3 10.1 81 359-439 88-179 (301)
127 2pp0_A L-talarate/galactarate 52.2 82 0.0028 32.4 10.6 95 296-439 173-269 (398)
128 2qde_A Mandelate racemase/muco 52.0 2.1E+02 0.0072 29.2 13.8 150 220-421 134-298 (397)
129 3dx5_A Uncharacterized protein 51.6 23 0.00077 33.3 5.9 118 235-381 16-143 (286)
130 1nu5_A Chloromuconate cycloiso 51.0 1.7E+02 0.0057 29.5 12.5 104 281-440 118-238 (370)
131 1mdl_A Mandelate racemase; iso 50.8 1E+02 0.0035 30.9 10.9 27 297-323 143-169 (359)
132 2q02_A Putative cytoplasmic pr 50.5 1.5E+02 0.0053 27.2 12.0 75 360-440 84-161 (272)
133 1qap_A Quinolinic acid phospho 50.5 21 0.00072 36.4 5.8 61 243-321 221-281 (296)
134 2g6z_A Dual specificity protei 50.2 46 0.0016 31.9 7.9 112 247-404 28-141 (211)
135 3my9_A Muconate cycloisomerase 50.1 2.2E+02 0.0076 29.0 14.0 72 361-440 229-316 (377)
136 1yx1_A Hypothetical protein PA 50.1 17 0.00057 34.1 4.7 73 241-323 27-107 (264)
137 3cu2_A Ribulose-5-phosphate 3- 49.7 7.4 0.00025 38.3 2.3 87 222-324 15-103 (237)
138 1k77_A EC1530, hypothetical pr 49.5 1E+02 0.0035 28.2 9.9 79 359-440 83-168 (260)
139 1vrd_A Inosine-5'-monophosphat 49.3 1E+02 0.0035 32.5 11.0 64 239-319 238-305 (494)
140 1ypf_A GMP reductase; GUAC, pu 49.3 76 0.0026 32.1 9.7 113 237-395 105-226 (336)
141 2qjg_A Putative aldolase MJ040 49.3 1.3E+02 0.0045 28.7 11.0 184 241-484 49-238 (273)
142 3l0g_A Nicotinate-nucleotide p 49.2 15 0.00052 38.0 4.6 62 241-320 218-279 (300)
143 3tqv_A Nicotinate-nucleotide p 49.1 9.3 0.00032 39.2 3.0 61 241-319 209-269 (287)
144 3cm3_A Late protein H1, dual s 49.1 40 0.0014 30.3 6.9 115 247-400 51-170 (176)
145 2nv1_A Pyridoxal biosynthesis 49.1 22 0.00076 35.3 5.7 37 241-278 32-81 (305)
146 2v82_A 2-dehydro-3-deoxy-6-pho 48.9 65 0.0022 29.6 8.5 73 294-419 13-85 (212)
147 3dx5_A Uncharacterized protein 48.5 1.2E+02 0.0042 28.3 10.4 79 359-440 82-162 (286)
148 1mzh_A Deoxyribose-phosphate a 48.3 13 0.00044 35.8 3.7 87 221-317 54-149 (225)
149 2og9_A Mandelate racemase/muco 47.9 1.5E+02 0.0051 30.4 11.7 27 296-322 160-186 (393)
150 2z6i_A Trans-2-enoyl-ACP reduc 47.8 1.2E+02 0.0041 30.4 10.8 175 243-503 29-212 (332)
151 2ovl_A Putative racemase; stru 47.8 2.4E+02 0.008 28.6 15.0 182 165-420 101-299 (371)
152 2zad_A Muconate cycloisomerase 47.6 2.3E+02 0.0077 28.3 15.4 149 221-423 129-294 (345)
153 3obe_A Sugar phosphate isomera 47.6 22 0.00076 34.7 5.3 110 241-379 40-168 (305)
154 2y96_A Dual specificity phosph 47.3 1.3E+02 0.0045 28.5 10.5 123 246-409 75-201 (219)
155 3o8l_A 6-phosphofructokinase, 46.9 14 0.00048 42.5 4.3 79 291-376 409-491 (762)
156 2e6f_A Dihydroorotate dehydrog 46.6 18 0.00062 35.6 4.6 79 234-323 103-198 (314)
157 3tsh_A Pollen allergen PHL P 4 46.6 16 0.00056 38.7 4.5 42 377-424 45-86 (500)
158 1r0m_A N-acylamino acid racema 46.3 2.5E+02 0.0084 28.4 13.7 150 235-439 148-312 (375)
159 1a0c_A Xylose isomerase; ketol 45.9 2.9E+02 0.0098 29.4 13.8 165 244-436 87-284 (438)
160 2oz8_A MLL7089 protein; struct 45.7 2.3E+02 0.008 28.9 12.7 148 220-420 132-296 (389)
161 3uuw_A Putative oxidoreductase 45.4 26 0.0009 33.9 5.5 145 333-515 32-176 (308)
162 3o3r_A Aldo-keto reductase fam 45.2 44 0.0015 33.1 7.1 89 296-385 83-219 (316)
163 3ktc_A Xylose isomerase; putat 44.9 1.2E+02 0.004 29.7 10.0 89 301-424 34-130 (333)
164 2hk0_A D-psicose 3-epimerase; 44.7 83 0.0028 30.1 8.8 81 360-440 106-193 (309)
165 3rr1_A GALD, putative D-galact 44.4 1.6E+02 0.0055 30.7 11.5 196 165-440 81-302 (405)
166 1tkk_A Similar to chloromucona 44.3 92 0.0032 31.3 9.4 25 298-322 140-164 (366)
167 2oz8_A MLL7089 protein; struct 44.2 1.4E+02 0.0048 30.5 10.9 28 296-323 143-170 (389)
168 2dqw_A Dihydropteroate synthas 44.2 1.4E+02 0.0049 30.4 10.8 131 363-508 135-283 (294)
169 2j16_A SDP-1, tyrosine-protein 44.0 70 0.0024 29.9 7.9 93 249-372 64-156 (182)
170 2y5s_A DHPS, dihydropteroate s 44.0 52 0.0018 33.6 7.5 128 364-509 130-286 (294)
171 3jr2_A Hexulose-6-phosphate sy 43.9 20 0.00069 33.7 4.2 29 227-257 9-37 (218)
172 2y88_A Phosphoribosyl isomeras 43.7 49 0.0017 30.9 6.8 76 301-425 32-107 (244)
173 3cqj_A L-ribulose-5-phosphate 43.6 1.4E+02 0.0049 28.1 10.1 61 360-421 65-128 (295)
174 1vzw_A Phosphoribosyl isomeras 43.5 44 0.0015 31.4 6.5 53 301-384 33-85 (244)
175 3tsm_A IGPS, indole-3-glycerol 43.5 1.8E+02 0.0063 29.2 11.3 102 241-343 83-200 (272)
176 4h3d_A 3-dehydroquinate dehydr 43.2 29 0.00098 34.4 5.4 106 210-324 10-124 (258)
177 4az3_B Lysosomal protective pr 42.7 8.2 0.00028 35.0 1.3 31 416-446 123-154 (155)
178 1v77_A PH1877P, hypothetical p 42.3 39 0.0013 32.1 6.0 109 297-429 62-175 (212)
179 1vrd_A Inosine-5'-monophosphat 42.2 55 0.0019 34.5 7.6 66 405-482 240-305 (494)
180 3rxz_A Polysaccharide deacetyl 42.0 27 0.00091 34.4 4.9 75 360-448 61-144 (300)
181 1rvk_A Isomerase/lactonizing e 41.8 2.9E+02 0.0099 27.9 17.5 139 234-420 148-309 (382)
182 3ndo_A Deoxyribose-phosphate a 41.8 17 0.00058 36.1 3.5 98 217-323 60-169 (231)
183 2nli_A Lactate oxidase; flavoe 41.7 2.4E+02 0.0083 29.1 12.2 173 204-420 64-256 (368)
184 3dxe_B Amyloid beta A4 protein 41.7 8.2 0.00028 28.9 0.9 18 348-365 15-32 (35)
185 3rgo_A Protein-tyrosine phosph 41.6 71 0.0024 27.4 7.1 121 247-404 25-147 (157)
186 3f4w_A Putative hexulose 6 pho 41.3 52 0.0018 30.1 6.5 66 243-323 70-137 (211)
187 3eez_A Putative mandelate race 41.1 75 0.0026 32.6 8.3 27 296-322 143-169 (378)
188 3mwc_A Mandelate racemase/muco 41.0 3.2E+02 0.011 28.2 13.9 148 219-421 148-313 (400)
189 3ayv_A Putative uncharacterize 40.6 29 0.00099 32.1 4.7 62 360-422 75-138 (254)
190 1zxx_A 6-phosphofructokinase; 40.5 20 0.00068 37.1 3.9 77 301-382 19-104 (319)
191 4dwd_A Mandelate racemase/muco 40.5 3.3E+02 0.011 28.2 14.0 198 165-439 92-313 (393)
192 3vni_A Xylose isomerase domain 40.2 1.8E+02 0.0062 27.2 10.2 87 301-419 18-106 (294)
193 1ep3_A Dihydroorotate dehydrog 39.8 1.1E+02 0.0037 29.6 8.8 22 363-384 230-251 (311)
194 3o8o_B 6-phosphofructokinase s 39.7 19 0.00066 41.4 4.0 80 291-376 402-486 (766)
195 1z41_A YQJM, probable NADH-dep 39.7 2.8E+02 0.0094 28.0 12.0 63 296-384 225-287 (338)
196 3ro6_B Putative chloromuconate 39.5 1.6E+02 0.0055 29.8 10.3 164 221-439 130-309 (356)
197 1bxb_A Xylose isomerase; xylos 39.4 3.2E+02 0.011 27.7 14.0 65 360-424 68-139 (387)
198 1pfk_A Phosphofructokinase; tr 39.0 25 0.00085 36.4 4.4 85 291-381 11-104 (320)
199 1tqx_A D-ribulose-5-phosphate 38.9 20 0.0007 34.9 3.5 32 219-254 4-35 (227)
200 1w8s_A FBP aldolase, fructose- 38.5 88 0.003 30.8 8.0 72 237-319 158-230 (263)
201 3zwt_A Dihydroorotate dehydrog 38.2 67 0.0023 33.4 7.4 29 295-323 229-257 (367)
202 2hxp_A Dual specificity protei 37.9 1E+02 0.0035 27.1 7.7 54 300-373 72-125 (155)
203 1y0e_A Putative N-acetylmannos 37.8 97 0.0033 28.6 7.8 174 235-484 21-205 (223)
204 3ozy_A Putative mandelate race 37.6 3.6E+02 0.012 27.7 18.0 156 221-439 139-319 (389)
205 3ajx_A 3-hexulose-6-phosphate 37.3 48 0.0016 30.3 5.6 66 243-324 70-138 (207)
206 3opy_B 6-phosphofructo-1-kinas 37.3 18 0.0006 42.7 3.2 80 291-376 580-664 (941)
207 2qgy_A Enolase from the enviro 37.2 1.9E+02 0.0065 29.6 10.5 27 296-322 147-173 (391)
208 2poz_A Putative dehydratase; o 37.1 1.3E+02 0.0043 30.8 9.2 111 296-439 135-248 (392)
209 2r14_A Morphinone reductase; H 36.8 78 0.0027 32.9 7.7 166 239-422 86-276 (377)
210 4adt_A Pyridoxine biosynthetic 36.7 50 0.0017 33.7 6.1 37 241-278 32-81 (297)
211 2x7v_A Probable endonuclease 4 36.7 2.1E+02 0.0072 26.5 9.9 117 296-439 43-166 (287)
212 2p9b_A Possible prolidase; pro 36.7 1.3E+02 0.0044 30.3 9.1 80 242-321 120-206 (458)
213 1to3_A Putative aldolase YIHT; 36.7 91 0.0031 31.5 8.0 110 291-420 36-161 (304)
214 3l23_A Sugar phosphate isomera 36.3 83 0.0028 30.5 7.4 104 298-421 60-166 (303)
215 3sfw_A Dihydropyrimidinase; hy 36.3 2E+02 0.0068 29.4 10.5 152 243-439 78-254 (461)
216 1f76_A Dihydroorotate dehydrog 36.2 1.5E+02 0.0051 29.5 9.3 29 295-323 220-248 (336)
217 1ka9_F Imidazole glycerol phos 36.2 51 0.0018 30.9 5.7 56 300-385 31-86 (252)
218 1zzw_A Dual specificity protei 36.0 1.4E+02 0.0048 25.7 8.1 71 300-403 70-140 (149)
219 3dci_A Arylesterase; SGNH_hydr 36.0 1.4E+02 0.0049 27.1 8.5 90 360-455 89-202 (232)
220 3upl_A Oxidoreductase; rossman 36.0 19 0.00063 38.9 2.9 49 360-423 144-192 (446)
221 2qs8_A XAA-Pro dipeptidase; am 35.9 1.4E+02 0.0048 29.4 9.1 77 242-321 98-197 (418)
222 3gr7_A NADPH dehydrogenase; fl 35.5 40 0.0014 34.5 5.2 154 235-419 80-247 (340)
223 2hk0_A D-psicose 3-epimerase; 35.3 1.3E+02 0.0043 28.9 8.4 60 361-422 66-127 (309)
224 1tv5_A Dhodehase, dihydroorota 35.3 88 0.003 33.6 7.9 30 295-324 306-335 (443)
225 3mil_A Isoamyl acetate-hydroly 35.1 93 0.0032 27.7 7.0 59 361-423 61-122 (240)
226 3eoo_A Methylisocitrate lyase; 34.8 69 0.0024 32.8 6.8 78 235-327 169-246 (298)
227 2oud_A Dual specificity protei 34.8 1.4E+02 0.0048 26.9 8.2 54 300-373 74-127 (177)
228 3glc_A Aldolase LSRF; TIM barr 34.7 1.2E+02 0.004 31.0 8.4 93 242-349 194-287 (295)
229 2zds_A Putative DNA-binding pr 34.6 84 0.0029 30.1 7.0 26 299-324 110-135 (340)
230 2nt2_A Protein phosphatase sli 34.5 1.6E+02 0.0055 25.2 8.2 94 247-373 26-121 (145)
231 3vni_A Xylose isomerase domain 34.4 2.9E+02 0.01 25.8 16.2 122 298-440 45-174 (294)
232 3eez_A Putative mandelate race 34.3 4E+02 0.014 27.3 12.7 164 220-440 134-311 (378)
233 1wrm_A Dual specificity phosph 34.1 2.2E+02 0.0075 25.2 9.2 93 247-373 29-123 (165)
234 3o8o_A 6-phosphofructokinase s 34.0 28 0.00094 40.3 4.1 79 291-376 402-485 (787)
235 1qop_A Tryptophan synthase alp 34.0 3.4E+02 0.012 26.4 12.2 37 304-376 113-149 (268)
236 3jva_A Dipeptide epimerase; en 33.7 3.9E+02 0.013 27.0 13.5 134 234-420 138-291 (354)
237 2ocz_A 3-dehydroquinate dehydr 33.5 42 0.0014 32.7 4.7 121 234-373 13-140 (231)
238 3dgb_A Muconate cycloisomerase 33.4 4.1E+02 0.014 27.2 13.0 77 357-438 227-317 (382)
239 2gl5_A Putative dehydratase pr 33.3 1.4E+02 0.0046 30.7 8.7 111 296-439 148-267 (410)
240 1w4r_A Thymidine kinase; type 33.1 36 0.0012 32.9 4.2 90 300-421 35-124 (195)
241 2hcm_A Dual specificity protei 33.1 1.4E+02 0.0048 26.2 7.8 114 247-406 34-149 (164)
242 3btn_A Antizyme inhibitor 1; T 32.9 4.5E+02 0.015 27.5 14.9 66 297-386 172-240 (448)
243 3l5a_A NADH/flavin oxidoreduct 32.9 2.2E+02 0.0076 30.1 10.4 160 235-419 101-283 (419)
244 2qde_A Mandelate racemase/muco 32.8 1.6E+02 0.0056 30.1 9.2 26 297-322 144-169 (397)
245 3v5n_A Oxidoreductase; structu 32.5 81 0.0028 32.4 6.9 94 334-448 66-166 (417)
246 2zds_A Putative DNA-binding pr 32.5 1.5E+02 0.0051 28.4 8.4 79 360-440 110-199 (340)
247 2a5h_A L-lysine 2,3-aminomutas 32.4 1E+02 0.0036 32.1 7.8 104 295-422 143-260 (416)
248 3iwp_A Copper homeostasis prot 32.3 21 0.00071 36.8 2.5 77 240-321 49-132 (287)
249 3va8_A Probable dehydratase; e 32.1 3.7E+02 0.013 28.5 12.0 126 297-427 190-348 (445)
250 2orv_A Thymidine kinase; TP4A 31.8 40 0.0014 33.6 4.3 114 300-445 34-159 (234)
251 3ik4_A Mandelate racemase/muco 31.7 3E+02 0.01 28.0 10.9 117 296-421 141-297 (365)
252 2qul_A D-tagatose 3-epimerase; 31.6 2.4E+02 0.0081 26.2 9.4 78 360-440 87-175 (290)
253 2x7v_A Probable endonuclease 4 31.4 2.2E+02 0.0076 26.4 9.2 97 302-426 14-114 (287)
254 3oqb_A Oxidoreductase; structu 31.2 78 0.0027 31.6 6.4 89 337-448 50-139 (383)
255 3s5s_A Mandelate racemase/muco 31.1 2.6E+02 0.0087 28.9 10.4 122 297-421 143-298 (389)
256 2qw5_A Xylose isomerase-like T 30.7 99 0.0034 30.0 6.9 80 360-439 108-205 (335)
257 2g0w_A LMO2234 protein; putati 30.6 1.6E+02 0.0054 28.1 8.2 20 302-321 38-57 (296)
258 1k77_A EC1530, hypothetical pr 30.6 1.4E+02 0.0048 27.3 7.6 62 363-426 42-110 (260)
259 3go2_A Putative L-alanine-DL-g 30.6 4.7E+02 0.016 27.0 14.7 21 234-254 142-162 (409)
260 2g0w_A LMO2234 protein; putati 30.5 2.6E+02 0.0088 26.7 9.6 71 360-441 104-175 (296)
261 3krb_A Aldose reductase; ssgci 30.5 38 0.0013 34.1 4.0 30 357-387 202-235 (334)
262 2pp0_A L-talarate/galactarate 30.5 4.6E+02 0.016 26.9 14.2 182 166-419 130-327 (398)
263 3opy_A 6-phosphofructo-1-kinas 30.4 34 0.0012 40.6 4.1 79 291-376 607-690 (989)
264 1vc4_A Indole-3-glycerol phosp 30.3 72 0.0025 31.4 5.9 84 362-462 94-194 (254)
265 3toy_A Mandelate racemase/muco 30.2 4.7E+02 0.016 26.9 12.7 146 220-419 156-320 (383)
266 1qtw_A Endonuclease IV; DNA re 30.2 3.1E+02 0.011 25.3 9.9 98 301-426 13-114 (285)
267 3gtx_A Organophosphorus hydrol 30.1 2E+02 0.0067 29.4 9.2 76 235-315 61-149 (339)
268 3vc5_A Mandelate racemase/muco 30.1 4.3E+02 0.015 27.9 12.1 126 297-427 187-345 (441)
269 7odc_A Protein (ornithine deca 29.7 4.9E+02 0.017 27.0 17.9 99 296-420 171-274 (424)
270 3lnp_A Amidohydrolase family p 29.5 3.1E+02 0.011 27.5 10.4 97 295-420 222-332 (468)
271 3t7v_A Methylornithine synthas 29.4 1.1E+02 0.0037 30.4 7.0 28 296-323 90-117 (350)
272 1z41_A YQJM, probable NADH-dep 29.3 1.2E+02 0.0039 30.7 7.3 154 238-422 83-250 (338)
273 2ovl_A Putative racemase; stru 29.1 3.5E+02 0.012 27.3 10.8 93 296-439 144-240 (371)
274 1e8g_A Vanillyl-alcohol oxidas 29.0 96 0.0033 33.6 7.1 61 361-426 438-506 (560)
275 2ln3_A De novo designed protei 29.0 43 0.0015 28.4 3.4 50 362-418 11-60 (83)
276 2yci_X 5-methyltetrahydrofolat 29.0 1.2E+02 0.0043 30.2 7.4 72 361-438 112-187 (271)
277 3bjs_A Mandelate racemase/muco 28.7 4.2E+02 0.014 27.6 11.6 71 237-317 187-260 (428)
278 1p0k_A Isopentenyl-diphosphate 28.6 4.6E+02 0.016 26.3 14.0 123 239-420 75-208 (349)
279 3tjl_A NADPH dehydrogenase; OL 28.6 81 0.0028 33.6 6.3 130 237-377 91-239 (407)
280 2nql_A AGR_PAT_674P, isomerase 28.5 2.8E+02 0.0095 28.3 10.0 25 298-322 164-188 (388)
281 1rvk_A Isomerase/lactonizing e 28.5 4.4E+02 0.015 26.6 11.4 96 297-439 148-249 (382)
282 3ih1_A Methylisocitrate lyase; 28.3 1.1E+02 0.0037 31.5 6.9 79 235-328 173-251 (305)
283 3sbf_A Mandelate racemase / mu 28.1 2.8E+02 0.0097 28.6 10.1 63 166-254 90-152 (401)
284 2p8b_A Mandelate racemase/muco 28.0 1.9E+02 0.0066 29.0 8.7 25 298-322 141-165 (369)
285 1wa3_A 2-keto-3-deoxy-6-phosph 28.0 3.4E+02 0.012 24.6 10.5 30 293-322 15-44 (205)
286 3tsm_A IGPS, indole-3-glycerol 28.0 70 0.0024 32.2 5.4 20 402-421 157-176 (272)
287 3p3b_A Mandelate racemase/muco 27.9 1E+02 0.0035 31.7 6.7 94 300-439 150-249 (392)
288 1gte_A Dihydropyrimidine dehyd 27.9 5.4E+02 0.019 29.8 13.3 26 298-323 646-671 (1025)
289 1f76_A Dihydroorotate dehydrog 27.6 1.6E+02 0.0055 29.3 7.9 87 298-419 151-243 (336)
290 2h9a_A Carbon monoxide dehydro 27.4 89 0.0031 33.7 6.4 129 361-518 141-294 (445)
291 4e5t_A Mandelate racemase / mu 27.4 5.3E+02 0.018 26.6 17.5 29 233-262 149-177 (404)
292 1tlt_A Putative oxidoreductase 27.2 1.2E+02 0.0041 29.5 6.8 108 334-468 32-139 (319)
293 3qbu_A Putative uncharacterize 27.2 74 0.0025 31.9 5.4 74 361-448 74-156 (326)
294 1mzh_A Deoxyribose-phosphate a 27.1 1.8E+02 0.0062 27.8 7.9 65 239-319 133-203 (225)
295 1xim_A D-xylose isomerase; iso 27.0 2.8E+02 0.0095 28.1 9.7 64 360-424 68-139 (393)
296 3qxb_A Putative xylose isomera 27.0 1.7E+02 0.0057 28.2 7.7 77 361-440 114-200 (316)
297 3vk5_A MOEO5; TIM barrel, tran 26.8 91 0.0031 32.2 6.0 53 230-282 46-104 (286)
298 3rcy_A Mandelate racemase/muco 26.7 5.8E+02 0.02 26.8 12.4 116 281-440 112-253 (433)
299 1sjd_A N-acylamino acid racema 26.7 2.5E+02 0.0084 28.2 9.2 105 281-440 117-232 (368)
300 2hxt_A L-fuconate dehydratase; 26.7 2.3E+02 0.0078 29.5 9.2 92 297-440 197-292 (441)
301 1zfj_A Inosine monophosphate d 26.6 2.2E+02 0.0077 29.7 9.1 109 240-384 235-346 (491)
302 2gou_A Oxidoreductase, FMN-bin 26.6 1.9E+02 0.0065 29.8 8.4 27 297-323 247-273 (365)
303 4hkt_A Inositol 2-dehydrogenas 26.4 99 0.0034 30.2 6.1 92 333-448 28-119 (331)
304 4hnl_A Mandelate racemase/muco 26.0 92 0.0031 32.3 6.0 126 297-424 152-333 (421)
305 1p4c_A L(+)-mandelate dehydrog 25.9 5.6E+02 0.019 26.4 13.6 170 209-420 61-252 (380)
306 4dye_A Isomerase; enolase fami 25.9 5.7E+02 0.02 26.5 16.4 77 356-441 244-336 (398)
307 3bjs_A Mandelate racemase/muco 25.8 1.8E+02 0.0063 30.3 8.3 26 297-322 183-209 (428)
308 2zbt_A Pyridoxal biosynthesis 25.8 21 0.00072 35.0 1.2 19 241-260 91-109 (297)
309 1p0k_A Isopentenyl-diphosphate 25.7 5.2E+02 0.018 25.9 11.3 66 245-324 135-215 (349)
310 3aam_A Endonuclease IV, endoiv 25.6 4E+02 0.014 24.6 12.5 21 301-321 15-35 (270)
311 1geq_A Tryptophan synthase alp 25.6 4.2E+02 0.014 24.8 11.0 18 304-321 99-116 (248)
312 2esb_A Dual specificity protei 25.5 1.6E+02 0.0056 26.9 7.0 94 300-430 84-177 (188)
313 2kv9_B Integrin beta-3; platel 25.4 21 0.00071 30.5 0.9 14 335-348 11-24 (75)
314 2q05_A Late protein H1, dual s 25.4 2.3E+02 0.0079 26.1 8.1 114 247-399 68-186 (195)
315 1rpx_A Protein (ribulose-phosp 25.3 1.1E+02 0.0036 28.7 5.8 80 222-322 12-100 (230)
316 4awe_A Endo-beta-D-1,4-mannana 25.3 32 0.0011 31.8 2.3 81 297-379 34-119 (387)
317 4gac_A Alcohol dehydrogenase [ 25.1 56 0.0019 32.1 4.0 59 334-393 156-226 (324)
318 4a3s_A 6-phosphofructokinase; 24.8 49 0.0017 34.0 3.7 75 301-380 19-101 (319)
319 4ab4_A Xenobiotic reductase B; 24.8 2.4E+02 0.0082 29.3 8.8 163 237-419 78-260 (362)
320 3usb_A Inosine-5'-monophosphat 24.7 1.5E+02 0.0052 31.9 7.6 75 221-319 245-324 (511)
321 1vhn_A Putative flavin oxidore 24.5 64 0.0022 32.2 4.4 20 304-323 144-163 (318)
322 3gr7_A NADPH dehydrogenase; fl 24.4 1.8E+02 0.0061 29.7 7.7 63 296-384 225-287 (340)
323 2j6v_A UV endonuclease, UVDE; 24.2 15 0.00053 36.9 -0.1 136 240-379 64-220 (301)
324 3hgj_A Chromate reductase; TIM 24.2 2.6E+02 0.0091 28.3 8.9 28 296-323 235-262 (349)
325 1xla_A D-xylose isomerase; iso 24.0 2.9E+02 0.01 28.0 9.2 99 301-425 34-140 (394)
326 2ftp_A Hydroxymethylglutaryl-C 23.8 89 0.0031 31.1 5.3 73 241-320 87-179 (302)
327 3qld_A Mandelate racemase/muco 23.7 3.7E+02 0.012 27.7 10.0 122 298-421 149-298 (388)
328 3nvt_A 3-deoxy-D-arabino-heptu 23.6 4E+02 0.014 28.1 10.4 89 235-324 154-288 (385)
329 1h5y_A HISF; histidine biosynt 23.5 1.4E+02 0.0048 27.3 6.2 55 300-384 33-87 (253)
330 1pii_A N-(5'phosphoribosyl)ant 23.5 82 0.0028 34.0 5.2 19 402-420 145-163 (452)
331 2poz_A Putative dehydratase; o 23.5 5.9E+02 0.02 25.8 15.1 61 362-423 238-310 (392)
332 3s4o_A Protein tyrosine phosph 23.5 3.5E+02 0.012 23.1 11.8 121 233-401 33-163 (167)
333 3lut_A Voltage-gated potassium 23.5 1.1E+02 0.0039 30.9 6.1 33 356-388 217-255 (367)
334 3ohs_X Trans-1,2-dihydrobenzen 23.3 1.4E+02 0.0046 29.4 6.4 110 334-467 30-139 (334)
335 3gip_A N-acyl-D-glutamate deac 23.0 3.9E+02 0.013 27.5 10.1 55 359-420 226-280 (480)
336 3stp_A Galactonate dehydratase 23.0 5.7E+02 0.02 26.7 11.4 113 281-439 154-279 (412)
337 1yx1_A Hypothetical protein PA 22.8 80 0.0028 29.5 4.5 47 361-422 84-133 (264)
338 1yz4_A DUSP15, dual specificit 22.8 3.8E+02 0.013 23.3 9.1 92 247-372 30-123 (160)
339 3oa3_A Aldolase; structural ge 22.7 6.4E+02 0.022 25.9 14.5 167 235-451 71-242 (288)
340 2pq5_A Dual specificity protei 22.5 1.3E+02 0.0045 27.9 5.8 99 247-372 68-170 (205)
341 3ugv_A Enolase; enzyme functio 22.5 5.7E+02 0.02 26.3 11.1 152 220-420 157-327 (390)
342 3fok_A Uncharacterized protein 22.5 93 0.0032 32.4 5.2 109 299-420 70-182 (307)
343 1afs_A 3-alpha-HSD, 3-alpha-hy 22.3 41 0.0014 33.5 2.5 29 357-386 194-226 (323)
344 3fst_A 5,10-methylenetetrahydr 22.1 1.5E+02 0.0053 30.1 6.7 130 231-439 157-289 (304)
345 3ln3_A Dihydrodiol dehydrogena 22.1 1.1E+02 0.0036 30.4 5.4 26 357-383 195-224 (324)
346 1ny1_A Probable polysaccharide 22.0 3E+02 0.01 26.2 8.3 129 186-377 84-223 (240)
347 2r0b_A Serine/threonine/tyrosi 22.0 1.8E+02 0.0061 25.1 6.3 54 300-373 77-130 (154)
348 3eoo_A Methylisocitrate lyase; 22.0 85 0.0029 32.2 4.8 134 343-499 50-201 (298)
349 3i65_A Dihydroorotate dehydrog 21.8 2.2E+02 0.0074 30.5 8.0 96 223-324 184-307 (415)
350 3dg3_A Muconate cycloisomerase 21.6 6.4E+02 0.022 25.5 14.7 156 221-438 129-307 (367)
351 3oa2_A WBPB; oxidoreductase, s 21.5 52 0.0018 32.6 3.0 109 334-467 29-146 (318)
352 3lye_A Oxaloacetate acetyl hyd 21.2 84 0.0029 32.4 4.5 101 388-499 92-208 (307)
353 4g9p_A 4-hydroxy-3-methylbut-2 21.1 1.5E+02 0.0053 32.0 6.7 216 213-485 16-265 (406)
354 4e8g_A Enolase, mandelate race 20.9 3.5E+02 0.012 28.0 9.1 27 297-323 163-189 (391)
355 1dxe_A 2-dehydro-3-deoxy-galac 20.9 3.2E+02 0.011 26.5 8.4 30 243-274 84-113 (256)
356 2y5s_A DHPS, dihydropteroate s 20.9 98 0.0033 31.6 4.9 39 243-283 110-148 (294)
357 1x1o_A Nicotinate-nucleotide p 20.7 63 0.0021 32.8 3.5 61 241-319 207-267 (286)
358 1f3t_A ODC, ornithine decarbox 20.7 7E+02 0.024 25.6 15.7 101 297-424 172-277 (425)
359 3f81_A Dual specificity protei 20.7 1.4E+02 0.0048 26.6 5.5 101 247-373 50-155 (183)
360 3cl6_A PUUE allantoinase; URIC 20.6 1.1E+02 0.0037 30.3 5.1 72 361-446 81-161 (308)
361 3mz0_A Inositol 2-dehydrogenas 20.6 1.3E+02 0.0044 29.6 5.6 93 333-446 28-120 (344)
362 3fw9_A Reticuline oxidase; BI- 20.4 75 0.0026 34.2 4.2 44 376-425 37-80 (495)
363 2vyo_A ECU11_0510, chitooligos 20.4 1.7E+02 0.0057 28.3 6.3 75 362-448 40-125 (254)
364 4eiv_A Deoxyribose-phosphate a 20.3 1.2E+02 0.0042 31.5 5.5 98 219-322 82-188 (297)
365 1aj0_A DHPS, dihydropteroate s 20.2 1.4E+02 0.0048 30.1 5.9 72 243-323 103-188 (282)
366 2vc7_A Aryldialkylphosphatase; 20.1 1.1E+02 0.0036 29.4 4.8 57 361-419 109-169 (314)
367 3vte_A Tetrahydrocannabinolic 20.1 73 0.0025 34.6 4.0 43 377-425 46-88 (518)
368 2yl6_A Beta-N-acetylhexosamini 20.0 62 0.0021 34.2 3.4 26 296-321 18-43 (434)
No 1
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=100.00 E-value=4.5e-246 Score=1940.72 Aligned_cols=529 Identities=66% Similarity=1.075 Sum_probs=450.0
Q ss_pred ccccCCCCceeeeccccCCCC-CccccccEEEeecC--CCCceecccCCCCC-----CCCccCCCCCCCchhhhhhhhc-
Q 005965 86 FEQCFPKSSKEYREITHEESG-HILQVPFRRIHLSG--DEPNFDTYDTSGPQ-----NISPRVGLPKLRKDWIDRREKL- 156 (667)
Q Consensus 86 ~~~~~p~S~KiY~~~~~~g~~-~~lrVP~ReI~Ls~--~~~~~~vYDTSGPy-----~id~~~GLp~~R~~Wi~~R~d~- 156 (667)
.+.+||+|+|+|++| ++ ++||||||+|+|++ +++||+|||||||| .||+++|||++|++||.+|+|+
T Consensus 15 ~~~~~p~s~k~y~~g----~~~~~~~vp~r~i~l~~~~~~~~~~~ydtsgpy~d~~~~~d~~~glp~~r~~wi~~r~d~~ 90 (612)
T 3epo_A 15 STGPIPGSRKVYQAG----ELFPELRVPFREVAVHPSANEPPVTIYDPSGPYSDPAIQIDIEKGLPRTREALVVARGDVE 90 (612)
T ss_dssp CCSCCTTCEEEEEEC----SSSTTCEEEEEEECCCGGGCCCCEEECCCCGGGGCTTSCCCTTTCSCCTTHHHHHHTTCEE
T ss_pred ccCCCCCCeeEecCC----CCCCCCccceEEEecCCCCCCCCcceecCCCCCCCCCCccchhhCCchhhHHHHHccCCcc
Confidence 567899999999984 45 68999999999998 48899999999999 6999999999999999999863
Q ss_pred ------------------------------------CCCcccHHHHHHcCCCCHHHHHHHHHcC----------------
Q 005965 157 ------------------------------------GAPRYTQMYYAKQGVITEEMLYCATREK---------------- 184 (667)
Q Consensus 157 ------------------------------------~~~~mTQm~~Ar~GiIT~EMe~VA~~E~---------------- 184 (667)
.+++||||++||+|+|||||++||++||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ra~~g~~~TQm~~Ar~GiIT~EMe~VA~~E~~~~~~~~~~~~~g~~~ 170 (612)
T 3epo_A 91 EVADPRQVKPEDNGFAQGKHLAPEFPDTGRKIYRAKPGKLVTQLEYARAGIITAEMEYVAIRENLRREQDRPCVRDGEDF 170 (612)
T ss_dssp ECSSCCCC--------------CCCCCCSCCCEEECTTCCCSHHHHHHTTCCCHHHHHHHHHHHTTCCSSSCCCCCSCCS
T ss_pred cccccCcCChhhccccccccccccCCCcCCCCcccCCCCchhHHHHHhcCCCCHHHHHHHHHccccchhhhhhcccCccc
Confidence 1457999999999999999999999999
Q ss_pred -------CCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeec
Q 005965 185 -------LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDL 257 (667)
Q Consensus 185 -------i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDL 257 (667)
++|||||++||+||+|||+|+|||+++||+||+||+||||||||||++++|+++||||++||++|||||||||
T Consensus 171 ~~~~~~~i~pE~vR~~VA~Gr~VIPaN~nh~~~~P~~IG~~l~tKVNaNIGtS~~~~~ie~EveK~~~A~~~GADtvMDL 250 (612)
T 3epo_A 171 GASIPDFVTPEFVRQEIARGRAIIPANINHGELEPMAIGRNFLVKINANIGNSAVLSTVADEVDKLVWATRWGADTVMDL 250 (612)
T ss_dssp SCCCCSSCCHHHHHHHHHHTSEECCCCTTCTTCCCCCEETTSCCEEEEEECC-----CHHHHHHHHHHHHHTTCSEEEEC
T ss_pred cccCCCCcCHHHHHHHHhCCeEEeecCCCCCCCCeeEECCCceeEEeeeecCCCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccC
Q 005965 258 STGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTG 337 (667)
Q Consensus 258 STGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~Rvtg 337 (667)
||||||++||+|||+||||||||||||||++|++|++++||||+|||+|++||+||||||||||||++++++++.+|+||
T Consensus 251 STGgdi~~~R~~Il~~spvPiGTVPIYqA~~k~~g~~~~lt~e~~~d~ie~QAeqGVDfmTIHaGv~~~~v~~~~~R~tg 330 (612)
T 3epo_A 251 STGRNIHNIRDWIIRNSSVPIGTVPIYQALEKVNGVAEDLNWEVFRDTLIEQCEQGVDYFTIHAGVRLPFIPMTAKRVTG 330 (612)
T ss_dssp CCSTTHHHHHHHHHTTCSSCEEECHHHHHHHHTTTCGGGCCHHHHHHHHHHHHHHTCCEEEECTTCCGGGGGGGTTSSSC
T ss_pred cCCCCHHHHHHHHHHcCCCCccCcchHHHHHHhCCChhhCCHHHHHHHHHHHHHhCCCEEEEcccccHHHHHHhcCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeE
Q 005965 338 IVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQV 417 (667)
Q Consensus 338 IVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQV 417 (667)
|||||||||++||++|++|||||+|||+|||||++||||||||||||||||+||||+|||+||++|||||+|||++||||
T Consensus 331 IVSRGGSima~Wml~~~kENplYe~FD~ileI~k~YDVtlSLGDglRPG~iaDA~D~AQ~~EL~~LGELtkrAwe~gVQV 410 (612)
T 3epo_A 331 IVSRGGSIMAKWCLAHHKENFLYERFDEICEIMRAYDVSFSLGDGLRPGSTADANDEAQFSELRTLGELTKVAWKHGVQV 410 (612)
T ss_dssp CCCHHHHHHHHHHHHHTCCCHHHHTHHHHHHHHTTTTCEEEECCTTCCSSGGGTTCHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred eecCcHHHHHHHHHHcCCcChHHHHHHHHHHHHHHhCeEEecccccCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhhcccceeeecCcccccCCCChhHH
Q 005965 418 MNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDV 497 (667)
Q Consensus 418 MIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDV 497 (667)
|||||||||||+|++||++||++|++|||||||||||||||||||||||||||+|||+||||||||||||||||||+|||
T Consensus 411 MIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIAPGYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDV 490 (612)
T 3epo_A 411 MIEGPGHVAMHKIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDV 490 (612)
T ss_dssp EEECCCBCCHHHHHHHHHHHHHHTTTCCEEEECCBSCSSCTTCHHHHHHHHHHHHHHHTCCEEECCCTTTTTSCCCHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCCccccCccccccCCCchHHHHHHHHHHHHHhchhheeeccHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCcchhhHHHHHHHHHhhcCHHHHHhccCChHHHHhhhhccCCCCCCCCCCcccCCCCCchh
Q 005965 498 KAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCS 577 (667)
Q Consensus 498 reGVIA~kIAAHaaDlaKg~p~A~~rD~~mS~AR~~~dWe~Qf~LalDPe~Ar~~~~~~~p~~~~k~~~~CSMCGp~fCa 577 (667)
|+|||||||||||||||||+|+|++||++||+||++|||++||+||||||+||+||++++|.+.+|+++|||||||+|||
T Consensus 491 keGVIA~KIAAHaaDlAKg~pgA~~rD~~mS~AR~~~dWe~Qf~LalDPe~Ar~~~~e~~p~~~~k~~~~CSMCGp~fCa 570 (612)
T 3epo_A 491 KTGVITYKLAAHAADLAKGHPGAAMWDDAISRARFEFRWEDQFNLGLDPETARKFHDETLPKEAHKTAHFCSMCGPKFCS 570 (612)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHTTCHHHHHHTSSCHHHHHHHC------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHCCHHHHHHHcCCHHHHHHHHHhhCccccCCCCCccCCCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred hhhhHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccCCCccCccCCeeeecC
Q 005965 578 MKITEDVRKYAEEHGYGSAEEALQQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPE 634 (667)
Q Consensus 578 mki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~y~~~ 634 (667)
|||++++++++...+. +++++||++||+||++ .|++||+|.
T Consensus 571 mki~~~~~~~~~~~~~----~~~~~gm~~~~~~f~~------------~g~~~y~~~ 611 (612)
T 3epo_A 571 MKISQEVRDFAAGKAP----NSAELGMAEMSEKFRE------------QGSEIYLKT 611 (612)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHHHhhcccch----hHHHHHHHHHHHHHHh------------cCCceeccC
Confidence 9999999998776543 3567899999999999 899999975
No 2
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=93.70 E-value=0.2 Score=47.15 Aligned_cols=88 Identities=8% Similarity=-0.114 Sum_probs=48.5
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCC--------CChHHHHHHHHhcCCCCcccchhhhHHHHh
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTG--------RHIHETREWILRNSAVPVGTVPIYQALEKV 290 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTG--------gdi~~~R~~Il~nspvPVGTVPIYqAl~k~ 290 (667)
.+.|+-.+.-+-.. .++++ .++.+-++|.|.| +|... .++.++|+.+ +...+.+-.+-.+-.
T Consensus 16 ~~~klg~~~~~~~~-~~~~~---~l~~~~~~G~~~v-El~~~~~~~~~~~~~~~~~~~~l-~~~gl~i~~~~~~~~---- 85 (257)
T 3lmz_A 16 NPFHLGMAGYTFVN-FDLDT---TLKTLERLDIHYL-CIKDFHLPLNSTDEQIRAFHDKC-AAHKVTGYAVGPIYM---- 85 (257)
T ss_dssp CSSEEEECGGGGTT-SCHHH---HHHHHHHTTCCEE-EECTTTSCTTCCHHHHHHHHHHH-HHTTCEEEEEEEEEE----
T ss_pred CceEEEEEEEeecC-CCHHH---HHHHHHHhCCCEE-EEecccCCCCCCHHHHHHHHHHH-HHcCCeEEEEecccc----
Confidence 33444444333332 24543 4566778999998 35433 1234555543 455555544332211
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
-+.+.+.+.|+.-.+-|+.++.+|.|
T Consensus 86 ------~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 86 ------KSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp ------CSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ------CCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 24567777777777778888877743
No 3
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.49 E-value=0.29 Score=45.86 Aligned_cols=69 Identities=9% Similarity=0.161 Sum_probs=41.0
Q ss_pred HHHHHHHhCCcEeeecCCCC------------------ChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHH
Q 005965 242 KVQWATMWGADTVMDLSTGR------------------HIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFR 303 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGg------------------di~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~ 303 (667)
.++.+.++|.|.| +|.... ++.++|+. ++...+.+-.+=.|- +.+.+.+.
T Consensus 27 ~l~~~~~~G~~~v-El~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gl~i~~~~~~~----------~~~~~~~~ 94 (262)
T 3p6l_A 27 ALDKTQELGLKYI-EIYPGHKLGGKWGDKVFDFNLDAQTQKEIKEL-AASKGIKIVGTGVYV----------AEKSSDWE 94 (262)
T ss_dssp HHHHHHHTTCCEE-EECTTEECCGGGTTCEESTTCCHHHHHHHHHH-HHHTTCEEEEEEEEC----------CSSTTHHH
T ss_pred HHHHHHHcCCCEE-eecCCcccccccccccccccCCHHHHHHHHHH-HHHcCCeEEEEeccC----------CccHHHHH
Confidence 4556678999998 455431 24556554 355555544332221 12446677
Q ss_pred HHHHHHHhcCCCEEEEecc
Q 005965 304 DTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaG 322 (667)
+.|+.-.+-|++++++|.|
T Consensus 95 ~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp HHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEecCC
Confidence 7777777788888888754
No 4
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.74 E-value=5.7 Score=42.30 Aligned_cols=208 Identities=18% Similarity=0.209 Sum_probs=141.1
Q ss_pred ceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHH--HHHHHHhcCCCCcccchhhhHHHH
Q 005965 212 PMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHE--TREWILRNSAVPVGTVPIYQALEK 289 (667)
Q Consensus 212 p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~--~R~~Il~nspvPVGTVPIYqAl~k 289 (667)
.+.||-+..++|-.=+ ..++.|++.=+++...-.++|+|-| +++.-. ... .=+.|-+.+++|+
T Consensus 23 ~v~IGG~~Pi~VQSMt--nt~T~D~~atv~Qi~~l~~aG~diV-Rvavp~-~~~a~al~~I~~~~~vPl----------- 87 (366)
T 3noy_A 23 NVKIGGDAPIVVQSMT--STKTHDVEATLNQIKRLYEAGCEIV-RVAVPH-KEDVEALEEIVKKSPMPV----------- 87 (366)
T ss_dssp TEEESTTSCCEEEEEC--CSCTTCHHHHHHHHHHHHHTTCCEE-EEECCS-HHHHHHHHHHHHHCSSCE-----------
T ss_pred CEEEcCCCcEEEEEec--CCCCcCHHHHHHHHHHHHHcCCCEE-EeCCCC-hHHHHHHHHHHhcCCCCE-----------
Confidence 4788889999998776 4456899999999999999999965 676654 221 2233444455543
Q ss_pred hcCCCCC--CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHH
Q 005965 290 VDGIAEN--LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEIL 367 (667)
Q Consensus 290 ~~g~~~~--lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~il 367 (667)
+.| ++... +.+-++.|||-+-|..| | |.+ -++|++++
T Consensus 88 ----vaDiHf~~~l----al~a~e~G~dklRINPG-N-------------ig~-------------------~~~~~~vv 126 (366)
T 3noy_A 88 ----IADIHFAPSY----AFLSMEKGVHGIRINPG-N-------------IGK-------------------EEIVREIV 126 (366)
T ss_dssp ----EEECCSCHHH----HHHHHHTTCSEEEECHH-H-------------HSC-------------------HHHHHHHH
T ss_pred ----EEeCCCCHHH----HHHHHHhCCCeEEECCc-c-------------cCc-------------------hhHHHHHH
Confidence 122 34433 33468899999999888 1 110 13589999
Q ss_pred HHHhHhceeEeccCCCCCCCccC--------CCcHHHHHHHHHHHHHHHHHHhcCC-eEEeeCCCCCCCCchHHHHHHHH
Q 005965 368 DICNQYDVALSIGDGLRPGSIYD--------ANDTAQFAELLTQGELTRRAWDKDV-QVMNEGPGHIPMHKIPENMQKQL 438 (667)
Q Consensus 368 eI~k~YDVtlSLGDGLRPG~iaD--------A~D~AQ~~EL~~LGEL~krA~e~gV-QVMIEGPGHVPl~~I~~Nv~lqk 438 (667)
+.|++|++.+=+| .=-||+.+ -+=++-+ ...-+.++++.+.|. ++.|-=..+=+...|+++-.+-+
T Consensus 127 ~~ak~~~~piRIG--vN~GSL~~~ll~~yg~~~~eamV---eSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~ayr~la~ 201 (366)
T 3noy_A 127 EEAKRRGVAVRIG--VNSGSLEKDLLEKYGYPSAEALA---ESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAE 201 (366)
T ss_dssp HHHHHHTCEEEEE--EEGGGCCHHHHHHHSSCCHHHHH---HHHHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEe--cCCcCCCHHHHHhcCCCCHHHHH---HHHHHHHHHHHhCCCCeEEEeeecCChHHHHHHHHHHHh
Confidence 9999999999886 22344432 1212222 334467788889998 55554445656678888888877
Q ss_pred HhcCCCCccccCccccccCCCch---hHHHhHHHHHhhhcccceeeecCc
Q 005965 439 EWCNEAPFYTLGPLTTDIAPGYD---HITSAIGAANIGALGTALLCYVTP 485 (667)
Q Consensus 439 ~lC~~APfYvLGPLvTDIApGYD---HItsAIGaA~aa~~GadfLCYVTP 485 (667)
+ | +-|+. || +|-.+.+.| --+.+||+.+.--.|--+-.-+|+
T Consensus 202 ~-~-dyPLH-lG--vTEAG~~~~G~ikSsigiG~LL~dGIGDTIRVSLt~ 246 (366)
T 3noy_A 202 R-T-DVPLH-IG--ITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTD 246 (366)
T ss_dssp H-C-CCCEE-EC--CSSCCSHHHHHHHHHHHHHHHHHTTCCSEECCCCSS
T ss_pred c-c-CCCEE-Ec--cCCCCCCcceeeehHHHHHHHHHhcccceEEEeCCC
Confidence 7 5 48885 77 788888887 445566777777788777777774
No 5
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=91.05 E-value=1.2 Score=45.74 Aligned_cols=125 Identities=9% Similarity=-0.060 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEecccccc------------ccccccCcccCccccccH----H---HHHHHHHcCC-cCch
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLR------------YIPLTAKRMTGIVSRGGS----I---HAKWCLAYHK-ENFA 359 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~------------~l~~~~~RvtgIVSRGGS----i---~a~Wml~h~~-ENpL 359 (667)
+...+.-++|.++|.|++-|...=++. .++....++.=.+|=++| . .+.-.+.... ++|+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~i 153 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCL 153 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCE
Confidence 556677789999999999999954442 222222332223565555 2 2233344444 3554
Q ss_pred h-----hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCC--eEEeeCCCCCCCC----
Q 005965 360 Y-----EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDV--QVMNEGPGHIPMH---- 428 (667)
Q Consensus 360 Y-----e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gV--QVMIEGPGHVPl~---- 428 (667)
- .+|+++++++++|++.+-+-- +| | +..+-+++++|.++|| .=+|==||.-|+-
T Consensus 154 INdvs~~~~~~~~~~aa~~g~~vv~m~-~~--------d------v~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e 218 (310)
T 2h9a_B 154 LSSATKDNYKPIVATCMVHGHSVVASA-PL--------D------INLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIE 218 (310)
T ss_dssp EEEECTTTHHHHHHHHHHHTCEEEEEC-SS--------C------HHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHH
T ss_pred EEECCCCccHHHHHHHHHhCCCEEEEC-hh--------H------HHHHHHHHHHHHHCCCChhhEEEeCCCccccCchH
Confidence 1 479999999999999887632 11 2 3667788999999999 4466678888765
Q ss_pred chHHHHHHHHH
Q 005965 429 KIPENMQKQLE 439 (667)
Q Consensus 429 ~I~~Nv~lqk~ 439 (667)
+-..|+++-++
T Consensus 219 ~~~~~l~~ir~ 229 (310)
T 2h9a_B 219 YSYSIIERMRL 229 (310)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 54477888887
No 6
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=90.76 E-value=3.4 Score=38.33 Aligned_cols=39 Identities=18% Similarity=0.063 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCCeEEeeCCCCC--CCCchHHHHHHHHHh
Q 005965 402 TQGELTRRAWDKDVQVMNEGPGHI--PMHKIPENMQKQLEW 440 (667)
Q Consensus 402 ~LGEL~krA~e~gVQVMIEGPGHV--Pl~~I~~Nv~lqk~l 440 (667)
.|.+|.+.|.++||++.+|--.+- .++...+-.++-+++
T Consensus 124 ~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~ 164 (278)
T 1i60_A 124 VLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTV 164 (278)
T ss_dssp HHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHh
Confidence 456666666667777777654443 455555555555544
No 7
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=89.53 E-value=0.88 Score=42.35 Aligned_cols=76 Identities=9% Similarity=0.090 Sum_probs=45.9
Q ss_pred HHHHHHHHhCCcEeeecC---------CCCChHHHHHHHHhcCCCCcccch-hhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 241 YKVQWATMWGADTVMDLS---------TGRHIHETREWILRNSAVPVGTVP-IYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLS---------TGgdi~~~R~~Il~nspvPVGTVP-IYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
+.++.+.++|.|.| +|. .+.++.++|+.+ +...+.+-++= .|. + +. ..+-..+.+.+.|+--+
T Consensus 23 ~~l~~~~~~G~~~v-El~~~~~~~~~~~~~~~~~~~~~~-~~~gl~~~~~~~~~~-~---~~-~~~~~~~~~~~~i~~a~ 95 (272)
T 2q02_A 23 AFFRLVKRLEFNKV-ELRNDMPSGSVTDDLNYNQVRNLA-EKYGLEIVTINAVYP-F---NQ-LTEEVVKKTEGLLRDAQ 95 (272)
T ss_dssp HHHHHHHHTTCCEE-EEETTSTTSSTTTTCCHHHHHHHH-HHTTCEEEEEEEETT-T---TS-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-EeeccccccccccccCHHHHHHHH-HHcCCeEEechhhhc-c---CC-cHHHHHHHHHHHHHHHH
Confidence 34566678999987 333 345678887765 55666664331 111 1 00 00112356777777788
Q ss_pred hcCCCEEEEeccc
Q 005965 311 EQGVDYFTIHAGV 323 (667)
Q Consensus 311 eqGVDfmTIHaGv 323 (667)
+-|++++.+|.|.
T Consensus 96 ~lG~~~v~~~~g~ 108 (272)
T 2q02_A 96 GVGARALVLCPLN 108 (272)
T ss_dssp HHTCSEEEECCCC
T ss_pred HhCCCEEEEccCC
Confidence 8899999999873
No 8
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=87.92 E-value=2.6 Score=38.84 Aligned_cols=173 Identities=11% Similarity=0.050 Sum_probs=97.4
Q ss_pred CCCCCChHHHHHHHHHHHHhCCcEeeec-----CCCCC-hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHH
Q 005965 230 SAVASSIEEEVYKVQWATMWGADTVMDL-----STGRH-IHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFR 303 (667)
Q Consensus 230 S~~~~~ieeEveKl~~A~~~GADtVMDL-----STGgd-i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~ 303 (667)
+.|..+++++++-++.+. -|+|.|||= +.|-+ |.++|+. .+.+|| |- +-...+ ..+
T Consensus 6 a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~---~~~~~i-----~~-----~~~~~~-~~~--- 67 (211)
T 3f4w_A 6 ALDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEK---YPHKEV-----LA-----DAKIMD-GGH--- 67 (211)
T ss_dssp EECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHH---CTTSEE-----EE-----EEEECS-CHH---
T ss_pred EeCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHh---CCCCEE-----EE-----EEEecc-chH---
Confidence 557789999999888775 699999983 33321 2233321 133444 21 111111 112
Q ss_pred HHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCC
Q 005965 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGL 383 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGL 383 (667)
..+++-++.|+|++++|+-.. .++..++++.+++|++.+-+ +=+
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~-----------------------------------~~~~~~~~~~~~~~g~~~~v-~~~ 111 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTD-----------------------------------VLTIQSCIRAAKEAGKQVVV-DMI 111 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSC-----------------------------------HHHHHHHHHHHHHHTCEEEE-ECT
T ss_pred HHHHHHHhcCCCEEEEeCCCC-----------------------------------hhHHHHHHHHHHHcCCeEEE-Eec
Confidence 237778889999999997521 14678899999999765432 101
Q ss_pred CCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC----CCCCchHHHHHHHHHhcCCCCccccCccccccCCC
Q 005965 384 RPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH----IPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPG 459 (667)
Q Consensus 384 RPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH----VPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApG 459 (667)
-| . +.-+.++++.+.|+..+-=.||. .+.. ..+.++.-++.+.+.|+.+-|=+.
T Consensus 112 ~~------~---------t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~-~~~~i~~l~~~~~~~~i~~~gGI~------ 169 (211)
T 3f4w_A 112 CV------D---------DLPARVRLLEEAGADMLAVHTGTDQQAAGRK-PIDDLITMLKVRRKARIAVAGGIS------ 169 (211)
T ss_dssp TC------S---------SHHHHHHHHHHHTCCEEEEECCHHHHHTTCC-SHHHHHHHHHHCSSCEEEEESSCC------
T ss_pred CC------C---------CHHHHHHHHHHcCCCEEEEcCCCcccccCCC-CHHHHHHHHHHcCCCcEEEECCCC------
Confidence 12 1 12355677778887765444652 1111 223455556666566776555431
Q ss_pred chhHHHhHHHHHhhhcccceeeecC
Q 005965 460 YDHITSAIGAANIGALGTALLCYVT 484 (667)
Q Consensus 460 YDHItsAIGaA~aa~~GadfLCYVT 484 (667)
-+++..+ ..+|||.++--+
T Consensus 170 ~~~~~~~------~~~Gad~vvvGs 188 (211)
T 3f4w_A 170 SQTVKDY------ALLGPDVVIVGS 188 (211)
T ss_dssp TTTHHHH------HTTCCSEEEECH
T ss_pred HHHHHHH------HHcCCCEEEECH
Confidence 2444433 245777776544
No 9
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=87.74 E-value=2.8 Score=39.69 Aligned_cols=92 Identities=14% Similarity=0.245 Sum_probs=55.0
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCC---CChHHHHHHHHhcCCCCcccchh-hhHHHHhcCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTG---RHIHETREWILRNSAVPVGTVPI-YQALEKVDGIAE 295 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTG---gdi~~~R~~Il~nspvPVGTVPI-YqAl~k~~g~~~ 295 (667)
..|+-.+.-+-.. .++++ .++.+.++|.|.|= |... .++.++|+.+ +...+.+-++-. |. +.+.
T Consensus 25 ~mklg~~~~~~~~-~~~~~---~l~~~~~~G~~~vE-l~~~~~~~~~~~~~~~l-~~~gl~v~~~~~~~~------~~l~ 92 (287)
T 3kws_A 25 ELKLSFQEGIAPG-ESLNE---KLDFMEKLGVVGFE-PGGGGLAGRVNEIKQAL-NGRNIKVSAICAGFK------GFIL 92 (287)
T ss_dssp CCEEEEETTSSCC-SSHHH---HHHHHHHTTCCEEE-CBSTTCGGGHHHHHHHH-TTSSCEECEEECCCC------SCTT
T ss_pred eeeEEEEecccCC-CCHHH---HHHHHHHcCCCEEE-ecCCchHHHHHHHHHHH-HHcCCeEEEEecCCC------CcCC
Confidence 4454444333322 24544 45566688999874 5443 5677887765 666676644311 11 1111
Q ss_pred CCC-------HHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 296 NLS-------WEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 296 ~lt-------~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
..+ .+.+.+.|+.-++-|++++.+|.|.
T Consensus 93 ~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~ 127 (287)
T 3kws_A 93 STDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAF 127 (287)
T ss_dssp BSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 112 3577788888889999999999985
No 10
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=87.22 E-value=0.96 Score=48.72 Aligned_cols=114 Identities=13% Similarity=0.173 Sum_probs=71.0
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCe-EEeeCCCCCCCCchHHHHHHHHH
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQ-VMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQ-VMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
++|+++++++++||+.+-+ .+ + | +..+-+|+++|.++|+. +++. ||=--+-+.-+|+++.++
T Consensus 187 en~~~~~~la~~y~~~vV~----~~-~-----~------l~~l~~lv~~a~~~Gi~~IiLD-P~~~~~~~sl~~~~~IR~ 249 (445)
T 2h9a_A 187 DNYEQMVELAKKYNVPLTV----SA-K-----G------LDALAELVQKITALGYKNLILD-PQPENISEGLFYQTQIRR 249 (445)
T ss_dssp TTHHHHHHHHHHHTCCEEE----EC-S-----S------HHHHHHHHHHHHHTTCCCEEEE-CCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEE----Ec-C-----C------HHHHHHHHHHHHHCCCCcEEEc-CCchhHHHHHHHHHHHHH
Confidence 3689999999999986655 11 1 2 55688999999999995 4444 661114445557777777
Q ss_pred hcCCCCccccC-ccccccCCCchhHHHhHHHHHhhhcccceeeecCcccccCCC
Q 005965 440 WCNEAPFYTLG-PLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLP 492 (667)
Q Consensus 440 lC~~APfYvLG-PLvTDIApGYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP 492 (667)
+-=..+|-.|| |+++.+.-- |-.--|.-|+++...||++|-.=.+++|-.||
T Consensus 250 ~al~~~d~~lg~P~i~~vs~~-d~~~ea~lA~~~~~~GasIl~~~~~~~~~rlp 302 (445)
T 2h9a_A 250 LAIKKLFRPFGYPTIAFALDE-NPYQAVMEASVYIAKYAGIIVLNTVEPADILP 302 (445)
T ss_dssp HHHHSCCGGGCSCBEEECCCS-SHHHHHHHHHHHHHTTCSEEEECCCCHHHHHH
T ss_pred hhhcCCCcccCCCeeecCCch-hHHHHHHHHHHHHHcCCeEEEecCccHHHhcc
Confidence 63111444444 454444322 44456666666677777777665555554444
No 11
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=87.11 E-value=4.8 Score=39.66 Aligned_cols=50 Identities=14% Similarity=0.197 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh--hhHHHHHHHHhHh
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY--EHWDEILDICNQY 373 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY--e~FD~ileI~k~Y 373 (667)
.|+.|++.+.+++-.+.|+..+.+.-| |+|++ ++|.++++.+++.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~gG---------------------------------e~p~~~~~~~~~li~~i~~~ 129 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQSG---------------------------------EDPYXMPDVISDIVKEIKKM 129 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEEES---------------------------------CCGGGTTHHHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEEeC---------------------------------CCCCccHHHHHHHHHHHHhc
Confidence 589999999999988899988877544 46666 5666777777776
Q ss_pred ceeEe
Q 005965 374 DVALS 378 (667)
Q Consensus 374 DVtlS 378 (667)
++.+.
T Consensus 130 ~~~i~ 134 (348)
T 3iix_A 130 GVAVT 134 (348)
T ss_dssp SCEEE
T ss_pred CceEE
Confidence 66555
No 12
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=86.81 E-value=5.2 Score=40.93 Aligned_cols=126 Identities=18% Similarity=0.286 Sum_probs=70.4
Q ss_pred eEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHH-------------------HHHHhcCCCCcccch
Q 005965 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETR-------------------EWILRNSAVPVGTVP 282 (667)
Q Consensus 222 KVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R-------------------~~Il~nspvPVGTVP 282 (667)
++.++|+. ++++.=.+-++.+.++|+|-| ||-.|-.....| +++-+.+.+||+-
T Consensus 59 p~~vQL~g----~~p~~~~~aA~~a~~~G~D~I-eIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~v-- 131 (350)
T 3b0p_A 59 PIALQLAG----SDPKSLAEAARIGEAFGYDEI-NLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTV-- 131 (350)
T ss_dssp SEEEEEEC----SCHHHHHHHHHHHHHTTCSEE-EEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEE--
T ss_pred eEEEEeCC----CCHHHHHHHHHHHHHcCCCEE-EECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEE--
Confidence 34446653 245666666778889999987 676543332222 3343444455432
Q ss_pred hhhHHHHhc-CCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch--
Q 005965 283 IYQALEKVD-GIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-- 359 (667)
Q Consensus 283 IYqAl~k~~-g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-- 359 (667)
|.. |.-...+.+++.+.+..-.+.|||+++||.+.... |. ..++|+.
T Consensus 132 ------KiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~----------g~--------------~g~~~~~~~ 181 (350)
T 3b0p_A 132 ------KMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALL----------AL--------------STKANREIP 181 (350)
T ss_dssp ------EEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------------------------------CC
T ss_pred ------EEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhc----------cc--------------CcccccCCC
Confidence 111 11123455677777777778999999999753210 11 0111111
Q ss_pred hhhHHHHHHHHhHh-ceeEeccCCCC
Q 005965 360 YEHWDEILDICNQY-DVALSIGDGLR 384 (667)
Q Consensus 360 Ye~FD~ileI~k~Y-DVtlSLGDGLR 384 (667)
-..|+.|-+|.+.. ++.+...-|++
T Consensus 182 ~~~~~~i~~ik~~~~~iPVianGgI~ 207 (350)
T 3b0p_A 182 PLRHDWVHRLKGDFPQLTFVTNGGIR 207 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEESSCC
T ss_pred cccHHHHHHHHHhCCCCeEEEECCcC
Confidence 12577788888887 88887665544
No 13
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.15 E-value=0.97 Score=44.24 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=78.5
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHHHHhcCCCC-cccch-hhhHHHHhcC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREWILRNSAVP-VGTVP-IYQALEKVDG 292 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~Il~nspvP-VGTVP-IYqAl~k~~g 292 (667)
.+||.+.+|......+.+.-+.-.+.|++.|||-| +++.- .++-+.+.+.|-+-...- --.+| |++.
T Consensus 54 ~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet------ 127 (220)
T 1ub3_A 54 PFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILET------ 127 (220)
T ss_dssp SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCG------
T ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEec------
Confidence 47888888876666777777888899999999988 66553 358888887765432211 01455 5543
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEeccc-----ccccccc---ccCcccCccccccH
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAGV-----LLRYIPL---TAKRMTGIVSRGGS 344 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv-----~~~~l~~---~~~RvtgIVSRGGS 344 (667)
..||.|.+....+--++.|.||+=.=.|. +.+.+.+ ..+.-+||+--||-
T Consensus 128 --~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v~VkaaGGi 185 (220)
T 1ub3_A 128 --GYFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRAQVKAAGGI 185 (220)
T ss_dssp --GGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEESSC
T ss_pred --CCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEECCC
Confidence 22688999999999999999999665443 3344442 11333466666663
No 14
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=85.71 E-value=5.1 Score=41.55 Aligned_cols=69 Identities=26% Similarity=0.335 Sum_probs=40.8
Q ss_pred EeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCChHHHH---HHHHhcCCCCc--ccchhhhHHHHhcCCCCC
Q 005965 223 VNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRHIHETR---EWILRNSAVPV--GTVPIYQALEKVDGIAEN 296 (667)
Q Consensus 223 VNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgdi~~~R---~~Il~nspvPV--GTVPIYqAl~k~~g~~~~ 296 (667)
|.+|+|... .+.++.++++|+|.|. |.+-| +-..+. ++|-+..++|| |+|
T Consensus 98 vga~ig~~~--------~e~a~~l~eaGad~I~ld~a~G-~~~~~~~~i~~i~~~~~~~Vivg~v--------------- 153 (361)
T 3khj_A 98 VGAAIGVNE--------IERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSKMNIDVIVGNV--------------- 153 (361)
T ss_dssp CEEEECTTC--------HHHHHHHHHTTCSEEEECCSCC-SBHHHHHHHHHHHHHCCCEEEEEEE---------------
T ss_pred EEEEeCCCH--------HHHHHHHHHcCcCeEEEeCCCC-CcHHHHHHHHHHHHhcCCcEEEccC---------------
Confidence 455666543 6788899999999874 55554 433222 23334435554 343
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEE
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
.|.+. .++-.+.|+||+.+
T Consensus 154 ~t~e~----A~~l~~aGaD~I~V 172 (361)
T 3khj_A 154 VTEEA----TKELIENGADGIKV 172 (361)
T ss_dssp CSHHH----HHHHHHTTCSEEEE
T ss_pred CCHHH----HHHHHHcCcCEEEE
Confidence 23333 33445689999998
No 15
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=85.68 E-value=1.6 Score=45.69 Aligned_cols=80 Identities=23% Similarity=0.225 Sum_probs=54.2
Q ss_pred HHHHHHHHHhCCcEeeec--------CCCC-----ChHHHHHHHHhcCCCCc------ccchhhhHHHHhcCCCCC----
Q 005965 240 VYKVQWATMWGADTVMDL--------STGR-----HIHETREWILRNSAVPV------GTVPIYQALEKVDGIAEN---- 296 (667)
Q Consensus 240 veKl~~A~~~GADtVMDL--------STGg-----di~~~R~~Il~nspvPV------GTVPIYqAl~k~~g~~~~---- 296 (667)
.+-++.|.+.||+.||+| ..|| |.+.+++ |.+.+++|| |-+--||.++..|=++.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~-I~~av~iPV~~K~rig~~~e~qilea~GaD~Id~s~~ 105 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEE-IMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEV 105 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHH-HHHHCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHH-HHHhcCCCeEEEEeecchHHHHHHHHcCCCEEehhcc
Confidence 456889999999999999 3455 6666654 456778886 667778888887544432
Q ss_pred CCHHH--------------------HHHHHHHHHhcCCCEEEEec
Q 005965 297 LSWEV--------------------FRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 297 lt~e~--------------------~~d~ieeQAeqGVDfmTIHa 321 (667)
||+.+ +-+.++. +..|+|+++.|-
T Consensus 106 l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~-~~~Ga~~i~t~g 149 (330)
T 2yzr_A 106 LTQADPFFHIYKKKFNVPFVCGARNLGEAVRR-IWEGAAMIRTKG 149 (330)
T ss_dssp SCCSCSSCCCCGGGCSSCEEEECSSHHHHHHH-HHHTCSEEEECC
T ss_pred CCHHHHHHHhhhhhcccchhhccccHHHHHHH-HhcCcceeeccC
Confidence 12112 3334444 489999999997
No 16
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=84.51 E-value=2.8 Score=39.67 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=70.1
Q ss_pred HHHHHHHhCCcEeeecCCCC-------ChHHHHHHHHhcCCCCcccc--h----hhhHHHH--h-cCCC----CCCCHHH
Q 005965 242 KVQWATMWGADTVMDLSTGR-------HIHETREWILRNSAVPVGTV--P----IYQALEK--V-DGIA----ENLSWEV 301 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGg-------di~~~R~~Il~nspvPVGTV--P----IYqAl~k--~-~g~~----~~lt~e~ 301 (667)
.++.+.++|.|.|- |.... ++.++|+. ++...+.+..+ + .|.-+.. . -+.. .+-..+.
T Consensus 26 ~l~~~~~~G~~~vE-l~~~~~~~~~~~~~~~~~~~-l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~ 103 (290)
T 3tva_A 26 HLEVAQDLKVPTVQ-VHAPHPHTRTREHAQAFRAK-CDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAE 103 (290)
T ss_dssp CHHHHHHTTCSEEE-EECCCGGGCSHHHHHHHHHH-HHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHH
T ss_pred HHHHHHHcCCCEEE-ecCCCCCcCCHHHHHHHHHH-HHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHH
Confidence 56778889999984 44432 26667664 46677776554 1 1221110 0 0111 1123467
Q ss_pred HHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccC
Q 005965 302 FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGD 381 (667)
Q Consensus 302 ~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGD 381 (667)
+.+.|+--++-|++++.+|.|..... +. ..| .-+.+.|.++++++++|+|+|.|=.
T Consensus 104 ~~~~i~~a~~lG~~~v~~~~G~~~~~------------~~-----~~~-------~~~~~~l~~l~~~a~~~Gv~l~lE~ 159 (290)
T 3tva_A 104 MKEISDFASWVGCPAIGLHIGFVPES------------SS-----PDY-------SELVRVTQDLLTHAANHGQAVHLET 159 (290)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCCT------------TS-----HHH-------HHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCccc------------ch-----HHH-------HHHHHHHHHHHHHHHHcCCEEEEec
Confidence 78888888889999999999842110 00 111 1235778888888999999888876
Q ss_pred C
Q 005965 382 G 382 (667)
Q Consensus 382 G 382 (667)
-
T Consensus 160 ~ 160 (290)
T 3tva_A 160 G 160 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=83.00 E-value=4.5 Score=41.24 Aligned_cols=26 Identities=27% Similarity=0.280 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
-+.+.|.+..++-.++|.|.+=||.|
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g 169 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVG 169 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc
Confidence 46789999999999999999999987
No 18
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=82.13 E-value=4.3 Score=35.31 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
..+++.|.+..+.| -|||. + | ++|-|.+.+.|++.... -.++++++.+++.
T Consensus 79 ~~~~~~i~~~~~~~----lVHC~---------a----G-~~Rtg~~~~~~l~~~~~-----~~~~~a~~~~r~~------ 129 (161)
T 2i6j_A 79 LTIMKWLLSEKEGN----LVHCV---------G----G-IGRTGTILASYLILTEG-----LEVESAIDEVRLV------ 129 (161)
T ss_dssp HHHHHHHHHCCTTE----EEECS---------S----S-SHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHH------
T ss_pred HHHHHHHHHhCCCC----EEECC---------C----C-CCHHHHHHHHHHHHHcC-----CCHHHHHHHHHHh------
Confidence 45666666655666 79994 2 3 48999999999887632 3467788888874
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHHHHHHH
Q 005965 380 GDGLRPGSIYDANDTAQFAELLTQGELTR 408 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~EL~~LGEL~k 408 (667)
||+++- ...|+.-|.......+
T Consensus 130 ----R~~~~~---~~~q~~~l~~~~~~l~ 151 (161)
T 2i6j_A 130 ----RPGAVQ---TYEQEMFLLRVEGMRK 151 (161)
T ss_dssp ----STTCSC---SHHHHHHHHHHHHTHH
T ss_pred ----CcccCC---CHHHHHHHHHHHHHHH
Confidence 999885 3456666655554443
No 19
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=81.21 E-value=3 Score=40.78 Aligned_cols=81 Identities=16% Similarity=0.244 Sum_probs=43.6
Q ss_pred eEeeccccCCCCCChHHHHHHHHHHHHhCCcEe-eecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHh-------cCC
Q 005965 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTV-MDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKV-------DGI 293 (667)
Q Consensus 222 KVNANIGtS~~~~~ieeEveKl~~A~~~GADtV-MDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~-------~g~ 293 (667)
||..+| -|.+..++++|++.+ +.|||-+ +|.-.|.=. -| +..| .|+.+++.+. +=.
T Consensus 2 ~i~pSi-la~D~~~l~~~i~~~----~~gad~lHvDvmDG~fv--------pn--~t~G-~~~v~~lr~~~~~~~dvhLm 65 (231)
T 3ctl_A 2 KISPSL-MCMDLLKFKEQIEFI----DSHADYFHIDIMDGHFV--------PN--LTLS-PFFVSQVKKLATKPLDCHLM 65 (231)
T ss_dssp EEEEBG-GGSCGGGHHHHHHHH----HTTCSCEEEEEECSSSS--------SC--CCBC-HHHHHHHHTTCCSCEEEEEE
T ss_pred eEEeeh-hhCChhhHHHHHHHH----HcCCCEEEEEEEeCccC--------cc--chhc-HHHHHHHHhccCCcEEEEEE
Confidence 455555 367778899998776 7899964 332222100 00 1111 1233333221 111
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 294 AENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 294 ~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
+. +++. .++.-++.|.|++|+|+..
T Consensus 66 v~--dp~~---~i~~~~~aGAd~itvh~Ea 90 (231)
T 3ctl_A 66 VT--RPQD---YIAQLARAGADFITLHPET 90 (231)
T ss_dssp SS--CGGG---THHHHHHHTCSEEEECGGG
T ss_pred ec--CHHH---HHHHHHHcCCCEEEECccc
Confidence 12 2333 3466677899999999876
No 20
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.13 E-value=11 Score=41.46 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCcc-----------ccccHHHHHHHHHc-C--------CcC
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIV-----------SRGGSIHAKWCLAY-H--------KEN 357 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIV-----------SRGGSi~a~Wml~h-~--------~EN 357 (667)
++|..++..++|.++|.|++-|-.|......+..-.|+..+| |.=-..+.+=..+. + -+|
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iINdis~~~ 417 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDE 417 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEEEEEESCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEEEECCcch
Confidence 467777778999999999999998763222221223444444 22223333333331 1 233
Q ss_pred chhhhHHHHHHHHhHhceeEecc--CCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCC-eEEeeCCCCCCC
Q 005965 358 FAYEHWDEILDICNQYDVALSIG--DGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDV-QVMNEGPGHIPM 427 (667)
Q Consensus 358 pLYe~FD~ileI~k~YDVtlSLG--DGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gV-QVMIEGPGHVPl 427 (667)
+.|+++++++++|++.+=+- ||-.|-. ..| =+..+-+++++|.++|| .=+|==||-.|+
T Consensus 418 ---~~~~~~~~~~~~~g~~vV~m~~~~~~p~t---~~~-----~~~~l~~~~~~a~~~Gi~~~IilDPg~~~i 479 (566)
T 1q7z_A 418 ---EELEMKINLLKKYGGTLIVLLMGKDVPKS---FEE-----RKEYFEKALKILERHDFSDRVIFDPGVLPL 479 (566)
T ss_dssp ---HHHHHHHHHHHHHCCEEEEESCSSSCCCS---HHH-----HHHHHHHHHHHHHHTTCGGGEEEECCCCCT
T ss_pred ---hhHHHHHHHHHHhCCeEEEEeCCCCCcCC---HHH-----HHHHHHHHHHHHHHCCCCCcEEEeCCCCcc
Confidence 77899999999999877652 2113322 111 25667889999999999 445556888776
No 21
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=80.44 E-value=8 Score=38.49 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccc-----------cccHHHHHHHHHc-CC-----cCc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVS-----------RGGSIHAKWCLAY-HK-----ENF 358 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVS-----------RGGSi~a~Wml~h-~~-----ENp 358 (667)
..+++...+..++|.++|.|++-|-+|.....-+..-.|+..+|. .=-..+.+=..+. ++ =|-
T Consensus 21 ~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~ 100 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNA 100 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECS
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCC
Confidence 356788888999999999999999987533211111123333332 2223333333321 21 123
Q ss_pred hhhhHHHHHHHHhHhceeEeccCCCC-CCCccCCCcHHHHHHHHHHHHHHHHHHhcCCe--EEeeCCCCCCCC----chH
Q 005965 359 AYEHWDEILDICNQYDVALSIGDGLR-PGSIYDANDTAQFAELLTQGELTRRAWDKDVQ--VMNEGPGHIPMH----KIP 431 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVtlSLGDGLR-PG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQ--VMIEGPGHVPl~----~I~ 431 (667)
+.+.|+++++++++|++.+=|== ++ .|--.+..+ -+..+-+++++|.++||. =+|==||.-|+. +-.
T Consensus 101 ~~d~~~~~~~~~a~~~~~vvlmh-~~~~G~p~t~~~-----~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~~~~~~ 174 (262)
T 1f6y_A 101 EREKVEKLFPLAVEHGAALIGLT-MNKTGIPKDSDT-----RLAFAMELVAAADEFGLPMEDLYIDPLILPANVAQDHAP 174 (262)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEES-CCSSCSCSSHHH-----HHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTTCTTHHH
T ss_pred CcccHHHHHHHHHHhCCcEEEEc-CCCCCCCCCHHH-----HHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCCChHHHH
Confidence 34778899999999998765521 11 121111111 234567899999999995 344457776653 333
Q ss_pred HHHHHHHHhcC
Q 005965 432 ENMQKQLEWCN 442 (667)
Q Consensus 432 ~Nv~lqk~lC~ 442 (667)
++++..+++..
T Consensus 175 ~~l~~l~~l~~ 185 (262)
T 1f6y_A 175 EVLKTLQQIKM 185 (262)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 45555555443
No 22
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=79.53 E-value=7.4 Score=37.96 Aligned_cols=116 Identities=17% Similarity=0.147 Sum_probs=65.7
Q ss_pred HHHHHHhCCcEeeecCCCCC-hHHHHHHHHhcC-CCC--cccchh---------hhHHH-Hh--cCCCCCCCHHHHHHHH
Q 005965 243 VQWATMWGADTVMDLSTGRH-IHETREWILRNS-AVP--VGTVPI---------YQALE-KV--DGIAENLSWEVFRDTL 306 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgd-i~~~R~~Il~ns-pvP--VGTVPI---------YqAl~-k~--~g~~~~lt~e~~~d~i 306 (667)
+..+++.|.-||.|+.+... ...+|+.+-... +-| .-..+. +.-+. .. .+...--+.+++++.+
T Consensus 94 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (403)
T 3gnh_A 94 AKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAV 173 (403)
T ss_dssp HHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHH
T ss_pred HHHHHhCCeeEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCCcccCCHHHHHHHH
Confidence 46889999999999865433 334555543321 000 000010 00000 00 0011234679999999
Q ss_pred HHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 307 IEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 307 eeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
+++.++|+|++-++.. -++.|+++. +..-.+-.+.|.++++.++++++.+.+
T Consensus 174 ~~~~~~g~~~ik~~~~-------------G~~~~~~~~--------~~~~~~~~e~l~~~~~~A~~~g~~v~~ 225 (403)
T 3gnh_A 174 RTLKKYGAQVIKICAT-------------GGVFSRGNE--------PGQQQLTYEEMKAVVDEAHMAGIKVAA 225 (403)
T ss_dssp HHHHHTTCSEEEEECB-------------CCSSSSSCC--------TTCBCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEEeec-------------CCcCCCCCC--------CccccCCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999988862 123333332 333445556777777777777766653
No 23
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=79.35 E-value=32 Score=32.60 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE-e
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL-S 378 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl-S 378 (667)
..+.+.++.-++.|.|++-+...-. .....+++.+++++|++.+ |
T Consensus 41 ~~~~~~l~~~~~~G~~~vEl~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 86 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQAVEIAVRDP----------------------------------SIVDWNEVKILSEELNLPICA 86 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCG----------------------------------GGSCHHHHHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCCc----------------------------------chhhHHHHHHHHHHcCCeEEE
Confidence 4566777777888999998876410 0145789999999999988 6
Q ss_pred ccCCC----CCCCccCCCcHHHH-HHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 379 IGDGL----RPGSIYDANDTAQF-AELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 379 LGDGL----RPG~iaDA~D~AQ~-~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
++-++ ....+.+. |.... +-+..+-+..+.|.+.|+.+++ +|
T Consensus 87 ~~~~~p~~~~~~~l~~~-d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~ 133 (290)
T 2zvr_A 87 IGTGQAYLADGLSLTHP-NDEIRKKAIERVVKHTEVAGMFGALVII-GL 133 (290)
T ss_dssp EECTHHHHTTCCCTTCS-SHHHHHHHHHHHHHHHHHHHHHTCEEEE-SG
T ss_pred EeccCccccCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCEEE-ec
Confidence 65422 12344433 33222 2345667788889999999999 76
No 24
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=79.11 E-value=3.8 Score=41.60 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=71.3
Q ss_pred HHHHHHHHhCCcEeeecCC-------------CCChHHHHHHHHhcCCCCcccc-------hhhhHHHHhcCCCCCCCH-
Q 005965 241 YKVQWATMWGADTVMDLST-------------GRHIHETREWILRNSAVPVGTV-------PIYQALEKVDGIAENLSW- 299 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLST-------------Ggdi~~~R~~Il~nspvPVGTV-------PIYqAl~k~~g~~~~lt~- 299 (667)
++++.+.++|.|.| +|.. ..++.++|+.+ +...+.+..+ |.|. .|....-+.
T Consensus 37 e~l~~aa~~G~~~V-El~~~~~~p~~~~~~~~~~~~~~l~~~l-~~~GL~i~~~~~~~~~~p~~~-----~g~l~~~d~~ 109 (386)
T 1muw_A 37 ETVQRLAELGAHGV-TFHDDDLIPFGSSDTERESHIKRFRQAL-DATGMTVPMATTNLFTHPVFK-----DGGFTANDRD 109 (386)
T ss_dssp HHHHHHHHHTCCEE-EEEHHHHSCTTCCHHHHHHHHHHHHHHH-HHHTCBCCEEECCCSSSGGGT-----TCSTTCSSHH
T ss_pred HHHHHHHHcCCCEE-EeeCCCCCcccCcccccHHHHHHHHHHH-HHhCCeEEEEecccccccccc-----cCCCCCCCHH
Confidence 45667778899998 3432 23566777655 4555555443 3221 123333332
Q ss_pred ------HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 300 ------EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 300 ------e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+.+.+.|+--++-|++++++|.|..-...+ .+...-..| .-+-+.|.+|++++++|
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~-----------~~~~~~~~~-------~~~~e~L~~l~~~A~~~ 171 (386)
T 1muw_A 110 VRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESG-----------AAKDVRVAL-------DRMKEAFDLLGEYVTSQ 171 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESST-----------TSCCHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccc-----------ccCCHHHHH-------HHHHHHHHHHHHHHHhc
Confidence 567788888888999999999984210000 001111222 12467889999999999
Q ss_pred c--eeEeccCC
Q 005965 374 D--VALSIGDG 382 (667)
Q Consensus 374 D--VtlSLGDG 382 (667)
+ |+|.|=.-
T Consensus 172 G~~v~l~lE~~ 182 (386)
T 1muw_A 172 GYDIRFAIEPK 182 (386)
T ss_dssp TCCCEEEECCC
T ss_pred CCCeEEEEeeC
Confidence 8 99988663
No 25
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=78.96 E-value=4.1 Score=42.58 Aligned_cols=106 Identities=22% Similarity=0.207 Sum_probs=59.1
Q ss_pred CCCCHHHH-HHHHHcC-------CCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHH
Q 005965 170 GVITEEML-YCATREK-------LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVY 241 (667)
Q Consensus 170 GiIT~EMe-~VA~~E~-------i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEve 241 (667)
++-+++|. .+|+.-| +++|.++++|.+=+-. + +..||+++|++.+ -.+
T Consensus 56 ~vs~~~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~---------------~---~l~vga~vg~~~~------~~~ 111 (366)
T 4fo4_A 56 TVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIS---------------G---GLRVGAAVGAAPG------NEE 111 (366)
T ss_dssp TTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTT---------------T---SCCCEEECCSCTT------CHH
T ss_pred CCChHHHHHHHHHcCCceEeecCCCHHHHHHHHHHHHhc---------------C---ceeEEEEeccChh------HHH
Confidence 34456666 3333333 6888888877652210 1 2346777776432 245
Q ss_pred HHHHHHHhCCcEee-ecCCCCChHHH---HHHHHhcC-CCCc--ccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 242 KVQWATMWGADTVM-DLSTGRHIHET---REWILRNS-AVPV--GTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 242 Kl~~A~~~GADtVM-DLSTGgdi~~~---R~~Il~ns-pvPV--GTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
.++.++++|+|.|- |.+-| +-... -++|-+.. .+|| |+|. |.++... -.+.|+
T Consensus 112 ~~~~lieaGvd~I~idta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~v~---------------t~e~A~~----a~~aGA 171 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSSHG-HSEGVLQRIRETRAAYPHLEIIGGNVA---------------TAEGARA----LIEAGV 171 (366)
T ss_dssp HHHHHHHTTCSEEEEECSCT-TSHHHHHHHHHHHHHCTTCEEEEEEEC---------------SHHHHHH----HHHHTC
T ss_pred HHHHHHhCCCCEEEEeCCCC-CCHHHHHHHHHHHHhcCCCceEeeeeC---------------CHHHHHH----HHHcCC
Confidence 67889999999874 65554 32222 23444443 3443 4443 3343333 335699
Q ss_pred CEEEE
Q 005965 315 DYFTI 319 (667)
Q Consensus 315 DfmTI 319 (667)
||+.+
T Consensus 172 D~I~v 176 (366)
T 4fo4_A 172 SAVKV 176 (366)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99998
No 26
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=78.68 E-value=2.2 Score=40.08 Aligned_cols=109 Identities=20% Similarity=0.174 Sum_probs=67.4
Q ss_pred HHHHHHHHhCCcEeeecCCC------------CChHHHHHHHHhcCCC-CcccchhhhH-HHHhcCCCCCCCHHHHHHHH
Q 005965 241 YKVQWATMWGADTVMDLSTG------------RHIHETREWILRNSAV-PVGTVPIYQA-LEKVDGIAENLSWEVFRDTL 306 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTG------------gdi~~~R~~Il~nspv-PVGTVPIYqA-l~k~~g~~~~lt~e~~~d~i 306 (667)
+.++.|.++|.|.|- |... .++.++|+.+ +...+ .+..-.-|-. +.. .....+-+.+.+.+.|
T Consensus 18 ~~~~~~~~~G~~~vE-l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gl~~~~~h~~~~~~l~s-~~~~r~~~~~~~~~~i 94 (270)
T 3aam_A 18 GAVEEATALGLTAFQ-IFAKSPRSWRPRALSPAEVEAFRALR-EASGGLPAVIHASYLVNLGA-EGELWEKSVASLADDL 94 (270)
T ss_dssp HHHHHHHHHTCSCEE-EESSCTTCCSCCCCCHHHHHHHHHHH-HHTTCCCEEEECCTTCCTTC-SSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEE-EeCCCCCcCcCCCCCHHHHHHHHHHH-HHcCCceEEEecCcccCCCC-CHHHHHHHHHHHHHHH
Confidence 456778899999973 3221 2466676664 45555 4322111310 100 1111122456778888
Q ss_pred HHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHh-HhceeEeccCC
Q 005965 307 IEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICN-QYDVALSIGDG 382 (667)
Q Consensus 307 eeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k-~YDVtlSLGDG 382 (667)
+--++-|+.++++|.|-. + . .-+.+.|.++++.++ +|+|+|.|=.-
T Consensus 95 ~~a~~lGa~~vv~h~g~~--------~----------~------------~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 95 EKAALLGVEYVVVHPGSG--------R----------P------------ERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp HHHHHHTCCEEEECCCBS--------C----------H------------HHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred HHHHHcCCCEEEECCCCC--------C----------H------------HHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 888889999999999853 0 0 224677888899888 88999988654
No 27
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=78.58 E-value=25 Score=35.74 Aligned_cols=163 Identities=9% Similarity=0.006 Sum_probs=92.3
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcc-cchhhhHHHHhcCCCCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVG-TVPIYQALEKVDGIAENLS 298 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVG-TVPIYqAl~k~~g~~~~lt 298 (667)
++.+++.+|. .++++=.+.++.+.+.|-|+| .+-.|.++....+.|- ...=-+| .+||. .+++ ..+|
T Consensus 134 ~v~~~~~~~~----~~~~~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~~e~v~-avr~a~g~d~~l~---vDan---~~~~ 201 (379)
T 2rdx_A 134 GAPMYRVAPQ----RSEAETRAELARHRAAGYRQF-QIKVGADWQSDIDRIR-ACLPLLEPGEKAM---ADAN---QGWR 201 (379)
T ss_dssp SEEBCEECCC----SCSHHHHHHHHHHHHTTCCEE-EEECCSCHHHHHHHHH-HHGGGSCTTCEEE---EECT---TCSC
T ss_pred ceeEEEEecC----CCHHHHHHHHHHHHHcCCCEE-EEeccCCHHHHHHHHH-HHHHhcCCCCEEE---EECC---CCCC
Confidence 3455555553 366777788888999998887 4766666554443332 1111112 23331 1223 2357
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
.++..+.+.+-.+.|| |+ |-|+. +++.+-++.++.++-+.
T Consensus 202 ~~~a~~~~~~l~~~~i-~i--------------------------------------E~P~~-~~~~~~~l~~~~~iPI~ 241 (379)
T 2rdx_A 202 VDNAIRLARATRDLDY-IL--------------------------------------EQPCR-SYEECQQVRRVADQPMK 241 (379)
T ss_dssp HHHHHHHHHHTTTSCC-EE--------------------------------------ECCSS-SHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHHHhCCe-EE--------------------------------------eCCcC-CHHHHHHHHhhCCCCEE
Confidence 7888777766556677 76 34555 77777778777788777
Q ss_pred ccCCCCCCCccCC-------------CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 379 IGDGLRPGSIYDA-------------NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 379 LGDGLRPG~iaDA-------------~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
++..++- ..|+ -|..++.-+...-++++.|.++|++||+-+ +.-.-|-...-+|.-
T Consensus 242 ~de~i~~--~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~---~~es~i~~~a~~~la 310 (379)
T 2rdx_A 242 LDECVTG--LHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED---SWGGEIASAAVAHFA 310 (379)
T ss_dssp ECTTCCS--HHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC---SBCSHHHHHHHHHHH
T ss_pred EeCCcCC--HHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee---ccCcHHHHHHHHHHH
Confidence 7765531 0000 012222223334467778999999999964 333344444444444
No 28
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=77.97 E-value=37 Score=34.59 Aligned_cols=150 Identities=9% Similarity=0.019 Sum_probs=94.2
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcccchhhhHHHHhcCCCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVGTVPIYQALEKVDGIAENL 297 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVGTVPIYqAl~k~~g~~~~l 297 (667)
++.++..+|. .++++=.+.++.+.+.|-|+| .+-.|+++....+.|- |+. ++ .+||- + .++ ..+
T Consensus 136 ~v~~~~~~~~----~~~e~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~~e~v~avr~a-~g--d~~l~--v-D~n---~~~ 201 (384)
T 2pgw_A 136 AVGYFYFLQG----ETAEELARDAAVGHAQGERVF-YLKVGRGEKLDLEITAAVRGE-IG--DARLR--L-DAN---EGW 201 (384)
T ss_dssp EEEBCEECCC----SSHHHHHHHHHHHHHTTCCEE-EEECCSCHHHHHHHHHHHHTT-ST--TCEEE--E-ECT---TCC
T ss_pred ceEEEEECCC----CCHHHHHHHHHHHHHcCCCEE-EECcCCCHHHHHHHHHHHHHH-cC--CcEEE--E-ecC---CCC
Confidence 3455544442 467777788888999998887 4777766665544332 222 23 44441 1 223 346
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhcee
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVA 376 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVt 376 (667)
|.++..+.+..-.+.||+|+. -|+ -.+++.+-++.++.++-
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~~~~~~~~l~~~~~iP 243 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIE--------------------------------------QPTVSWSIPAMAHVREKVGIP 243 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEE--------------------------------------CCSCTTCHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHhcCCCEEe--------------------------------------CCCChhhHHHHHHHHhhCCCC
Confidence 788888888776778999875 011 14577777888888888
Q ss_pred EeccCCCCCC---------CccC--CCcHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 377 LSIGDGLRPG---------SIYD--ANDTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 377 lSLGDGLRPG---------~iaD--A~D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
+.++..++-- .-+| .-|..++.-+-..-++++.|.++|++||+-+
T Consensus 244 I~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 244 IVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 8888776520 0011 1144454445555677888999999999965
No 29
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=77.87 E-value=41 Score=34.51 Aligned_cols=152 Identities=11% Similarity=0.080 Sum_probs=85.5
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCC-hHHHHHH---HHhcCCCCcc-cchhhhHHHHhcCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRH-IHETREW---ILRNSAVPVG-TVPIYQALEKVDGIA 294 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgd-i~~~R~~---Il~nspvPVG-TVPIYqAl~k~~g~~ 294 (667)
++.+++| |......++++=.+.++.+.+.|-++|= |-.|.+ .....+. |.+.. | .+||. ..++
T Consensus 135 ~vp~~~~-g~~~~~~~~~~~~~~a~~~~~~Gf~~vK-ik~g~~~~~~~~e~v~avR~a~----G~d~~l~---vDan--- 202 (391)
T 2qgy_A 135 NVPIYAT-CWSDLKKDTNDYLRQIEKFYGKKYGGIK-IYPMLDSLSISIQFVEKVREIV----GDELPLM---LDLA--- 202 (391)
T ss_dssp EEEEEEE-CCCSSCCCHHHHHHHHHHHHHTTCSCEE-ECCCCSSHHHHHHHHHHHHHHH----CSSSCEE---EECC---
T ss_pred CcceEEe-cccCCCCCHHHHHHHHHHHHHcCCCEEE-EccCCChHHHHHHHHHHHHHHh----CCCCEEE---EEcC---
Confidence 4455554 2222135777778888999999998874 655534 2221111 11111 1 12221 1222
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHh
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQY 373 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~Y 373 (667)
...|.++..+.+++-.+.||+|+- -|+ ..+++.+-++.++.
T Consensus 203 ~~~~~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~ 244 (391)
T 2qgy_A 203 VPEDLDQTKSFLKEVSSFNPYWIE--------------------------------------EPVDGENISLLTEIKNTF 244 (391)
T ss_dssp CCSCHHHHHHHHHHHGGGCCSEEE--------------------------------------CSSCTTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEe--------------------------------------CCCChhhHHHHHHHHhhC
Confidence 246788888888887778999862 111 13567777777777
Q ss_pred ceeEeccCCCCC----------CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 374 DVALSIGDGLRP----------GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 374 DVtlSLGDGLRP----------G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
++-+.++..++- |+ +|. -|..++.-+...-++++.|.++|++||+-+.
T Consensus 245 ~iPIa~dE~~~~~~~~~~~i~~~~-~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 245 NMKVVTGEKQSGLVHFRELISRNA-ADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp SSCEEECTTCCSHHHHHHHHHTTC-CSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CCCEEEcCCcCCHHHHHHHHHcCC-CCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 888877766542 00 010 1222222333444677788899999997654
No 30
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=77.67 E-value=15 Score=36.92 Aligned_cols=184 Identities=11% Similarity=0.126 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH-hce
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ-YDV 375 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~-YDV 375 (667)
.+++...+..++|.++|.|++-|-++-.. .| =.+.+-.+++.+++ .|+
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~-----------------------------~e--E~~rv~~vi~~l~~~~~~ 79 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTA-----------------------------DD--PVRVMEWLVKTIQEVVDL 79 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCS-----------------------------SC--HHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-----------------------------hh--HHHHHHHHHHHHHHhCCC
Confidence 45688888999999999999999987510 11 12222233333333 366
Q ss_pred eEeccCCCCCCCc-------------cCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC--CCCCCC--chHHHHHHHH
Q 005965 376 ALSIGDGLRPGSI-------------YDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP--GHIPMH--KIPENMQKQL 438 (667)
Q Consensus 376 tlSLGDGLRPG~i-------------aDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP--GHVPl~--~I~~Nv~lqk 438 (667)
.||+ |..+|-.+ -|-+=. + ..+-++...|.++|+-|.+--. .-.|-+ ++.+-.+...
T Consensus 80 pisI-DT~~~~v~~aal~a~~Ga~iINdvs~~-~----d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~ 153 (271)
T 2yci_X 80 PCCL-DSTNPDAIEAGLKVHRGHAMINSTSAD-Q----WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELV 153 (271)
T ss_dssp CEEE-ECSCHHHHHHHHHHCCSCCEEEEECSC-H----HHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHH
T ss_pred eEEE-eCCCHHHHHHHHHhCCCCCEEEECCCC-c----cccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHH
Confidence 6666 55544322 111111 0 1122344445566666665432 112322 1111111111
Q ss_pred Hhc--CCCCc--cccCccccccCCCchhHHHhHHHHHhh-hc---ccceeeecCcccccCCCChhHHHHHHHHHHHHHHH
Q 005965 439 EWC--NEAPF--YTLGPLTTDIAPGYDHITSAIGAANIG-AL---GTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHA 510 (667)
Q Consensus 439 ~lC--~~APf--YvLGPLvTDIApGYDHItsAIGaA~aa-~~---GadfLCYVTPaEHLgLP~~eDVreGVIA~kIAAHa 510 (667)
+.| .|-|= .+|=|++.-++-+++|--.-+-..-.- .. |.-+||-+.-+-. |+|.. +.-+|..++-..+.-
T Consensus 154 ~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksf-g~~~r-~~l~~t~~~~a~~~g 231 (271)
T 2yci_X 154 ANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQ-KCPDR-PLINRTYLVMAMTAG 231 (271)
T ss_dssp HHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGT-TCSSH-HHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCcccc-CCchH-HHHHHHHHHHHHHHh
Confidence 112 23332 455555555555666554444333221 12 4778888887766 78844 444666555444444
Q ss_pred hhhhcCCcc
Q 005965 511 ADLAKGHPL 519 (667)
Q Consensus 511 aDlaKg~p~ 519 (667)
.|++--||.
T Consensus 232 ~~~~iv~~~ 240 (271)
T 2yci_X 232 LDAAIMDVD 240 (271)
T ss_dssp CCEEEECTT
T ss_pred CCcEEECCC
Confidence 455544554
No 31
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=77.14 E-value=48 Score=31.03 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHhCCcEeeecCCC---CChHHHHHHHHhcCCCCc----cc-----chhhhHHHHhcCCCCCCCHHHHHH
Q 005965 237 EEEVYKVQWATMWGADTVMDLSTG---RHIHETREWILRNSAVPV----GT-----VPIYQALEKVDGIAENLSWEVFRD 304 (667)
Q Consensus 237 eeEveKl~~A~~~GADtVMDLSTG---gdi~~~R~~Il~nspvPV----GT-----VPIYqAl~k~~g~~~~lt~e~~~d 304 (667)
+.-.+-+..|.+.|..+|+|.++. .|+..+++. .+..++-| |- -|-+- .+.+.+++.+
T Consensus 33 ~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~G~~~~~~hP~~~---------~~~~~~~l~~ 102 (291)
T 1bf6_A 33 AFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDV-MRETGINVVACTGYYQDAFFPEHV---------ATRSVQELAQ 102 (291)
T ss_dssp HHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHH-HHHHCCEEEEEECCCCGGGCCTHH---------HHSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHH-HHhcCCeEEEeeccccCccCcHhh---------hcCCHHHHHH
Confidence 443455667789999999999973 467777664 44444211 21 23221 1245678888
Q ss_pred HHHHHHhcCCC-----EEEE-eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 305 TLIEQAEQGVD-----YFTI-HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 305 ~ieeQAeqGVD-----fmTI-HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
.++++.++||+ +..| -+|+.. ... + ..--+-|..+++++++++..+.
T Consensus 103 ~~~~~l~~gi~~~~~~~~~iGe~gld~-------~~~----~----------------~~~~~~~~~~~~~a~~~~~pv~ 155 (291)
T 1bf6_A 103 EMVDEIEQGIDGTELKAGIIAEIGTSE-------GKI----T----------------PLEEKVFIAAALAHNQTGRPIS 155 (291)
T ss_dssp HHHHHHHTCSTTSSCCEEEEEEEECBT-------TBC----C----------------HHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHhccCCcCcceeeEEEEecCC-------CCC----C----------------HHHHHHHHHHHHHHHHHCCeEE
Confidence 88888888864 3332 223221 000 0 0012458889999999998887
Q ss_pred c--cCC
Q 005965 379 I--GDG 382 (667)
Q Consensus 379 L--GDG 382 (667)
+ ||+
T Consensus 156 iH~~~~ 161 (291)
T 1bf6_A 156 THTSFS 161 (291)
T ss_dssp EECGGG
T ss_pred EeCCCC
Confidence 7 654
No 32
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=76.69 E-value=13 Score=37.55 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
..++.|++.+.+++-.+.|++-+.|--|
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg 124 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAA 124 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 4589999999998888889987766544
No 33
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=76.67 E-value=19 Score=36.88 Aligned_cols=192 Identities=15% Similarity=0.145 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH-hcee
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ-YDVA 376 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~-YDVt 376 (667)
++++|.+..+.-.+.|+|.+-||+|--...+ |-- .-||+++. +. +...+|++-+++ .|+-
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~-----~~d---~~G~~l~~-------~~----~~~~eiv~av~~~v~~P 128 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKA-----QEG---GYGACLLL-------DL----ARVREILKAMGEAVRVP 128 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHH-----HHT---TCGGGGGG-------CH----HHHHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcC-----cCC---CcchhHHh-------CH----HHHHHHHHHHHHHhCCc
Confidence 4688888888877889999999999221111 111 13565531 11 222333333333 3444
Q ss_pred EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe-eCC----CCCCC-------CchHHHHHHHHHhcCCC
Q 005965 377 LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN-EGP----GHIPM-------HKIPENMQKQLEWCNEA 444 (667)
Q Consensus 377 lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI-EGP----GHVPl-------~~I~~Nv~lqk~lC~~A 444 (667)
+++ -+|+|.-.+ . .+...-++++++.++||...+ .|- |+.+- -.. .-+..-|+...+-
T Consensus 129 V~v--KiR~g~~~~-~------~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~-~~i~~ik~~~~~i 198 (350)
T 3b0p_A 129 VTV--KMRLGLEGK-E------TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRH-DWVHRLKGDFPQL 198 (350)
T ss_dssp EEE--EEESCBTTC-C------CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCH-HHHHHHHHHCTTS
T ss_pred eEE--EEecCcCcc-c------cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccH-HHHHHHHHhCCCC
Confidence 433 557774322 1 133456778888999998554 331 33321 111 2334444444356
Q ss_pred CccccCccccccCCCchhHHHhHHHHHhhhcccceeeecCcc--------c-------ccCCCChhHHHHHHHHH-----
Q 005965 445 PFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPK--------E-------HLGLPNRDDVKAGVIAY----- 504 (667)
Q Consensus 445 PfYvLGPLvTDIApGYDHItsAIGaA~aa~~GadfLCYVTPa--------E-------HLgLP~~eDVreGVIA~----- 504 (667)
|+..-|=+.| .+++..++- |||++..=++. + ...-|+..++.+-++-|
T Consensus 199 PVianGgI~s-----~eda~~~l~-------GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (350)
T 3b0p_A 199 TFVTNGGIRS-----LEEALFHLK-------RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEV 266 (350)
T ss_dssp EEEEESSCCS-----HHHHHHHHT-------TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECCcCC-----HHHHHHHHh-------CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 7766664322 244444431 55544332221 0 12356777776544432
Q ss_pred -------HHHHHHhhhhcCCcchhhHHHHHHHH
Q 005965 505 -------KIAAHAADLAKGHPLAQTWDDALSKA 530 (667)
Q Consensus 505 -------kIAAHaaDlaKg~p~A~~rD~~mS~A 530 (667)
.+--|..=+.||.|++..|=..++++
T Consensus 267 ~~g~~~~~~~kh~~~~~~g~~~~~~~r~~l~~~ 299 (350)
T 3b0p_A 267 LKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEG 299 (350)
T ss_dssp HHTCCHHHHHTTSTTTTTTSTTHHHHHHHHHHH
T ss_pred HcCccHHHHHHHHHHHHccCCCHHHHHHHHHCC
Confidence 23344444556666666555555544
No 34
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=75.25 E-value=13 Score=34.74 Aligned_cols=78 Identities=10% Similarity=0.179 Sum_probs=56.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhc
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYD 374 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YD 374 (667)
..++.+++.+.-..-.+.|+.+..+|+... ...+.|.+.+++|++.+
T Consensus 58 ~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~---------------------------------~~~~~~~~~i~~A~~lG 104 (262)
T 3p6l_A 58 FNLDAQTQKEIKELAASKGIKIVGTGVYVA---------------------------------EKSSDWEKMFKFAKAMD 104 (262)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEECC---------------------------------SSTTHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEeccCC---------------------------------ccHHHHHHHHHHHHHcC
Confidence 456676766666667788999998887632 13467999999999998
Q ss_pred ee-EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 375 VA-LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 375 Vt-lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
+. +.+. ||. .+ +.+|.+.|.++||++.+|--
T Consensus 105 a~~v~~~----~~~-------~~------~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 105 LEFITCE----PAL-------SD------WDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp CSEEEEC----CCG-------GG------HHHHHHHHHHHTCEEEEECC
T ss_pred CCEEEec----CCH-------HH------HHHHHHHHHHhCCEEEEEeC
Confidence 63 3332 331 22 35678889999999999974
No 35
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=74.94 E-value=11 Score=36.87 Aligned_cols=93 Identities=11% Similarity=0.068 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
+.+.+++.++ +.|+....+|++...... +++ .+ .-..++|++.+++|++.++..
T Consensus 77 ~~~~l~~~l~---~~GL~i~~~~~~~~~~~~-----------~~~-----------~~-~~~~~~~~~~i~~A~~lG~~~ 130 (305)
T 3obe_A 77 ASKDYKKMVD---DAGLRISSSHLTPSLREY-----------TKE-----------NM-PKFDEFWKKATDIHAELGVSC 130 (305)
T ss_dssp CHHHHHHHHH---HTTCEEEEEBCCCSCCCC-----------CGG-----------GH-HHHHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHH---HCCCeEEEeecccccccc-----------chh-----------hH-HHHHHHHHHHHHHHHHcCCCE
Confidence 4455555554 569999999987532211 010 00 123578999999999998643
Q ss_pred eccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeC
Q 005965 378 SIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 378 SLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEG 421 (667)
=.--|..++ .++.+++.+ ..|.+|++.|.++||.+-+|-
T Consensus 131 v~~~~~~~~-----~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 170 (305)
T 3obe_A 131 MVQPSLPRI-----ENEDDAKVVSEIFNRAGEITKKAGILWGYHN 170 (305)
T ss_dssp EEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred EEeCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 222133332 244455444 468899999999999999994
No 36
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=74.49 E-value=85 Score=32.92 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=56.4
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS 298 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt 298 (667)
+..++|..|..++.... -|.+=+.++.++|. ++=||+.-.++++++.+-+ ....++- .-| +
T Consensus 37 ~g~~l~~Pii~ApM~~v--te~~lA~A~a~~Gg--~gvi~~~~s~ee~~~~i~~-~~~~~~~---------~~g-----~ 97 (361)
T 3r2g_A 37 GKLTLNLPVISANMDTI--TESNMANFMHSKGA--MGALHRFMTIEENIQEFKK-CKGPVFV---------SVG-----C 97 (361)
T ss_dssp SSCEESSCEEECCSTTT--CSHHHHHHHHHTTC--EEBCCSCSCHHHHHHHHHT-CCSCCBE---------EEC-----S
T ss_pred CCEEcCCCEEECCCCCc--hHHHHHHHHHHcCC--CEEEeCCCCHHHHHHHHhh-cceEEEE---------EcC-----C
Confidence 44567777877776443 44555677788885 5557788899999988743 3222220 001 1
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecc
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.++..+.++.-.+.|||+++||+.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a 121 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVA 121 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCC
Confidence 256677788888899999999864
No 37
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=74.32 E-value=35 Score=31.45 Aligned_cols=60 Identities=7% Similarity=-0.012 Sum_probs=42.3
Q ss_pred hhHHHHHHHHhHhceeEe-ccCCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 361 EHWDEILDICNQYDVALS-IGDGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlS-LGDGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
...+++.+++++|++.++ ++-....++ .|....+ -+..+-+..+.|.+.|+.+++=-||.
T Consensus 46 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~ 107 (278)
T 1i60_A 46 HSLDDLAEYFQTHHIKPLALNALVFFNN----RDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLV 107 (278)
T ss_dssp SCHHHHHHHHHTSSCEEEEEEEEECCSS----CCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CCHHHHHHHHHHcCCCeeeecccccccc----CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 457899999999999986 554442222 2444433 35677888999999999988765553
No 38
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=73.97 E-value=13 Score=38.97 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=58.6
Q ss_pred CCCCHHHHHHHHHcC--------CCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHH
Q 005965 170 GVITEEMLYCATREK--------LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVY 241 (667)
Q Consensus 170 GiIT~EMe~VA~~E~--------i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEve 241 (667)
++.+.+|...+.+.| +++|.+++++.+-+- . +-+++|+. +.-.+
T Consensus 52 ~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~~~~------------~----------~~~~~g~~------~~~~e 103 (361)
T 3r2g_A 52 TITESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKG------------P----------VFVSVGCT------ENELQ 103 (361)
T ss_dssp TTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHTCCS------------C----------CBEEECSS------HHHHH
T ss_pred CchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhhcce------------E----------EEEEcCCC------HHHHH
Confidence 344556666655554 699999998864220 1 22455543 34566
Q ss_pred HHHHHHHhCCcEee-ecCCCCCh--HHHHHHHHhc---CCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCC
Q 005965 242 KVQWATMWGADTVM-DLSTGRHI--HETREWILRN---SAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVD 315 (667)
Q Consensus 242 Kl~~A~~~GADtVM-DLSTGgdi--~~~R~~Il~n---spvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVD 315 (667)
.++.++++|+|.|. |.+.|-.. .++=+||-+. .+|-+|+| .|.++. ++-.+.|+|
T Consensus 104 ~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V---------------~T~e~A----~~a~~aGaD 164 (361)
T 3r2g_A 104 RAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV---------------ATYAGA----DYLASCGAD 164 (361)
T ss_dssp HHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE---------------CSHHHH----HHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc---------------CCHHHH----HHHHHcCCC
Confidence 78899999999663 66665321 1222233332 23333333 344443 334578999
Q ss_pred EEEE
Q 005965 316 YFTI 319 (667)
Q Consensus 316 fmTI 319 (667)
++.+
T Consensus 165 ~I~V 168 (361)
T 3r2g_A 165 IIKA 168 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 39
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=73.53 E-value=9.4 Score=41.05 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=46.2
Q ss_pred CCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCC--hHHHHHHHHhcC-CCCc--ccchhhhHHHHhc
Q 005965 218 NFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRH--IHETREWILRNS-AVPV--GTVPIYQALEKVD 291 (667)
Q Consensus 218 gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgd--i~~~R~~Il~ns-pvPV--GTVPIYqAl~k~~ 291 (667)
+-+.-|++.+|+..+. ++.++..+++|+|.|- |.+.|.. .-++=++|-+.. .+|| |+|.
T Consensus 217 ~grL~v~aavG~~~d~------~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~--------- 281 (496)
T 4fxs_A 217 QGRLRVGAAVGAAPGN------EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA--------- 281 (496)
T ss_dssp TSCBCCEEECCSSSCC------HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEEC---------
T ss_pred ccceeeeeeeccccch------HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccC---------
Confidence 4466678889987543 5667778888999874 6666632 113334444444 3443 4432
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 292 GIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 292 g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
|.+.. ++-.+.|+|++.+
T Consensus 282 ------t~e~a----~~l~~aGaD~I~V 299 (496)
T 4fxs_A 282 ------TAEGA----RALIEAGVSAVKV 299 (496)
T ss_dssp ------SHHHH----HHHHHHTCSEEEE
T ss_pred ------cHHHH----HHHHHhCCCEEEE
Confidence 33332 3334579999986
No 40
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=73.14 E-value=41 Score=31.70 Aligned_cols=90 Identities=21% Similarity=0.113 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe-c
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS-I 379 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS-L 379 (667)
.+.+.|+.-++.|.|.+-+...- +....+++.+.+++|++.++ +
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~-----------------------------------~~~~~~~~~~~l~~~gl~v~~~ 83 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGG-----------------------------------LAGRVNEIKQALNGRNIKVSAI 83 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTT-----------------------------------CGGGHHHHHHHHTTSSCEECEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCc-----------------------------------hHHHHHHHHHHHHHcCCeEEEE
Confidence 34456666677899988876640 12568999999999999995 4
Q ss_pred cCCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCCCCC
Q 005965 380 GDGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGHIPM 427 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGHVPl 427 (667)
.-+. ++.+.. .|....+ -+..+-+..+.|.+.|+..++=.||..+.
T Consensus 84 ~~~~-~~~l~~-~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~ 130 (287)
T 3kws_A 84 CAGF-KGFILS-TDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQ 130 (287)
T ss_dssp ECCC-CSCTTB-SSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTC
T ss_pred ecCC-CCcCCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCc
Confidence 3332 344443 3444433 34567788999999999988877775543
No 41
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=72.74 E-value=3.5 Score=42.14 Aligned_cols=98 Identities=16% Similarity=0.120 Sum_probs=68.1
Q ss_pred ecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecC--CCCChH---HHHHHHHhcCCCCcccch---hh
Q 005965 216 GRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLS--TGRHIH---ETREWILRNSAVPVGTVP---IY 284 (667)
Q Consensus 216 G~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLS--TGgdi~---~~R~~Il~nspvPVGTVP---IY 284 (667)
|.++.|||.+-||=.......+.-+.-.+.|++.|||-| +++. -.+|.+ .+++.|-+-...- +.+| |.
T Consensus 85 gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~-~~~~lKVIl 163 (281)
T 2a4a_A 85 INPFKPKIACVINFPYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLL-TNKILKVII 163 (281)
T ss_dssp SSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTC-TTSEEEEEC
T ss_pred CCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHh-cCCceEEEE
Confidence 445578999888887777888888888999999999987 6554 134667 7777776544332 1256 44
Q ss_pred hHHHHhcCCCCCCCHHH-HHHHHHHHHhcCCCEEEEecc
Q 005965 285 QALEKVDGIAENLSWEV-FRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 285 qAl~k~~g~~~~lt~e~-~~d~ieeQAeqGVDfmTIHaG 322 (667)
+. ..|+.++ +....+--++.|.||+=-=.|
T Consensus 164 Et--------~~L~d~e~i~~A~~ia~eaGADfVKTSTG 194 (281)
T 2a4a_A 164 EV--------GELKTEDLIIKTTLAVLNGNADFIKTSTG 194 (281)
T ss_dssp CH--------HHHCSHHHHHHHHHHHHTTTCSEEECCCS
T ss_pred ec--------ccCCcHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 43 1234455 678888888999999865444
No 42
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=72.62 E-value=42 Score=32.92 Aligned_cols=113 Identities=16% Similarity=0.198 Sum_probs=64.9
Q ss_pred HHHHHHHhCCcEeeecCCCCChH-HHHHHHHhcCCCC------cc----------cchhhhHHHHhcC--CCCCCCHHHH
Q 005965 242 KVQWATMWGADTVMDLSTGRHIH-ETREWILRNSAVP------VG----------TVPIYQALEKVDG--IAENLSWEVF 302 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGgdi~-~~R~~Il~nspvP------VG----------TVPIYqAl~k~~g--~~~~lt~e~~ 302 (667)
-+..+++.|.-||.|..+....+ .+|+ .++...++ -| .+|-+.. ...+ .....+.+++
T Consensus 92 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~ 168 (408)
T 3be7_A 92 NAEKTLMAGFTTVRNVGAANYADVSVRD-AIERGVINGPTMLVSGPALGITGGHCDHNLLPP--EFNYSSEGVVDSPWEA 168 (408)
T ss_dssp HHHHHHTTTEEEEEECCCSTTHHHHHHH-HHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCT--TTCCCCTTBCCSHHHH
T ss_pred HHHHHHHcCCCEEEeCCCccccCHHHHH-HHHCCCCCCCEEEEccceeeccCCCCccccccc--cccccCCcccCCHHHH
Confidence 46778999999999987644444 4444 44433211 01 0110000 0000 0013467889
Q ss_pred HHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 303 RDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 303 ~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
.+.+++..+.|+|++-+.+. -|+.++++ ....-+.-.+.|.+++++++++++.+.
T Consensus 169 ~~~~~~~~~~g~~~ik~~~~-------------g~~~~~~~--------~~g~~~~~~~~l~~~~~~A~~~g~~v~ 223 (408)
T 3be7_A 169 RKMVRKNRKYGADLIKFCAT-------------GGVMSRNT--------DVNAKQFTLEEMKAIVDEAHNHGMKVA 223 (408)
T ss_dssp HHHHHHHHHTTCSEEEEECB-------------CCSSSSSC--------CTTSBCSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEEEec-------------CCcCCCCC--------CCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 99999999999998776531 12233322 012234456889999999999987764
No 43
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=72.55 E-value=7.9 Score=39.50 Aligned_cols=116 Identities=15% Similarity=0.173 Sum_probs=68.8
Q ss_pred HHHHHHHHhCCcEeeecCC-------------CCChHHHHHHHHhcCCCCcccc-------hhhhHHHHhcCCCCCCCH-
Q 005965 241 YKVQWATMWGADTVMDLST-------------GRHIHETREWILRNSAVPVGTV-------PIYQALEKVDGIAENLSW- 299 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLST-------------Ggdi~~~R~~Il~nspvPVGTV-------PIYqAl~k~~g~~~~lt~- 299 (667)
++++.+.++|.|.| +|.. ..++.++|+.+ +...+.|..+ |.|. .+.+...++
T Consensus 37 e~l~~aa~~G~d~V-El~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~GL~i~~~~~~~f~~p~~~-----~g~l~~~d~~ 109 (394)
T 1xla_A 37 EAVHKLAELGAYGI-TFHDNDLIPFDATEAEREKILGDFNQAL-KDTGLKVPMVTTNLFSHPVFK-----DGGFTSNDRS 109 (394)
T ss_dssp HHHHHHHHHTCCEE-EEEHHHHSCTTCCHHHHHHHHHHHHHHH-HHHCCBCCEEECCCSSSGGGT-----TCSTTCSSHH
T ss_pred HHHHHHHHcCCCEE-EecCCccCcccCCchhhHHHHHHHHHHH-HHcCCeEEEEecCccCCcccc-----CCccCCCCHH
Confidence 45677778999998 3332 12466677665 4444544322 2221 123333333
Q ss_pred ------HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 300 ------EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 300 ------e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+.+.+.|+--++-|++++.+|.|......+ + +...-..| .-+-+.|.+|++++++|
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~-------~----~~~~~~~~-------~~~~e~L~~l~~~A~~~ 171 (394)
T 1xla_A 110 IRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYD-------G----SKDLAAAL-------DRMREGVDTAAGYIKDK 171 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSG-------G----GCCHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccc-------c----ccCHHHHH-------HHHHHHHHHHHHHHHhc
Confidence 457778888889999999999984311000 0 01111122 12467889999999999
Q ss_pred c--eeEeccC
Q 005965 374 D--VALSIGD 381 (667)
Q Consensus 374 D--VtlSLGD 381 (667)
+ |+|.|=.
T Consensus 172 G~~v~l~lE~ 181 (394)
T 1xla_A 172 GYNLRIALEP 181 (394)
T ss_dssp TCCCEEEECC
T ss_pred CCCeEEEEec
Confidence 9 9998854
No 44
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=71.66 E-value=27 Score=35.32 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=80.2
Q ss_pred hHHHHHHHHhHhceeEecc--CCCCCCCccCCCc-HHHHHH-HHHHHHHHHHHHhcCCe---EEeeCCCCCCCCchHHHH
Q 005965 362 HWDEILDICNQYDVALSIG--DGLRPGSIYDAND-TAQFAE-LLTQGELTRRAWDKDVQ---VMNEGPGHIPMHKIPENM 434 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSLG--DGLRPG~iaDA~D-~AQ~~E-L~~LGEL~krA~e~gVQ---VMIEGPGHVPl~~I~~Nv 434 (667)
.++++++++++|++.+-|= .| .|....+..+ ..-+.| +..|.+++++|.++||. +++- ||.-.-...+.|+
T Consensus 121 ~d~~~~~~~a~~~~~vVlmh~~G-~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilD-Pg~gf~k~~~~n~ 198 (282)
T 1aj0_A 121 SEPGALEAAAETGLPVCLMHMQG-NPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLD-PGFGFGKNLSHNY 198 (282)
T ss_dssp CSTTHHHHHHHHTCCEEEECCSS-CTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE-CCTTSSCCHHHHH
T ss_pred CCHHHHHHHHHhCCeEEEEccCC-CCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEe-CCCCcccCHHHHH
Confidence 4578999999999876552 22 2332222111 012344 56788999999999996 7776 9988888999999
Q ss_pred HHHHHhcC----CCCccccCcc-------ccccCCCchhHH-HhHHHHHhhhcccceeeecCcccccCCCChhHHHHHHH
Q 005965 435 QKQLEWCN----EAPFYTLGPL-------TTDIAPGYDHIT-SAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVI 502 (667)
Q Consensus 435 ~lqk~lC~----~APfYvLGPL-------vTDIApGYDHIt-sAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDVreGVI 502 (667)
++-+.+-. +.|.. +|+= +|+. |-=|-+. ++.-.++++..||+++ .+.||++=+-
T Consensus 199 ~ll~~l~~~~~~g~P~l-~G~Srksfig~~~g~-~~~~rl~~t~a~~~~a~~~ga~Iv------------rvhdV~~~~~ 264 (282)
T 1aj0_A 199 SLLARLAEFHHFNLPLL-VGMSRKSMIGQLLNV-GPSERLSGSLACAVIAAMQGAHII------------RVHDVKETVE 264 (282)
T ss_dssp HHHHTGGGGGGGCSCBE-ECCTTCHHHHHHHTC-CGGGCHHHHHHHHHHHHHTTCSEE------------EESCHHHHHH
T ss_pred HHHHHHHHHhcCCCCEE-EEECccHhHHhhcCC-CHHHHHHHHHHHHHHHHHCCCeEE------------EeCCHHHHHH
Confidence 98887643 34432 2331 1121 1113222 2244667778888876 3345666666
Q ss_pred HHHHHHH
Q 005965 503 AYKIAAH 509 (667)
Q Consensus 503 A~kIAAH 509 (667)
|.+++.-
T Consensus 265 a~~~~~a 271 (282)
T 1aj0_A 265 AMRVVEA 271 (282)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 45
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=71.47 E-value=22 Score=33.15 Aligned_cols=63 Identities=14% Similarity=0.101 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC--CCCCCchHHHHHHH
Q 005965 360 YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG--HIPMHKIPENMQKQ 437 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG--HVPl~~I~~Nv~lq 437 (667)
.++|.+.+++|++.++..=.+ -||. ..|.+|.+.|.++||++-+|--+ .-.++..++-.++-
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~---~p~~-------------~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll 151 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVG---VPNY-------------ELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHT 151 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EECG-------------GGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEe---cCCH-------------HHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHH
Confidence 578999999999998754443 2541 23567888899999999999753 22445555555543
Q ss_pred H
Q 005965 438 L 438 (667)
Q Consensus 438 k 438 (667)
+
T Consensus 152 ~ 152 (257)
T 3lmz_A 152 K 152 (257)
T ss_dssp T
T ss_pred H
Confidence 3
No 46
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=71.38 E-value=38 Score=34.28 Aligned_cols=164 Identities=12% Similarity=0.004 Sum_probs=95.4
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcc-cchhhhHHHHhcCCCCCCCH
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVG-TVPIYQALEKVDGIAENLSW 299 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVG-TVPIYqAl~k~~g~~~~lt~ 299 (667)
+.+++.+|. .++++-.+.++.+.+.|-++| .+-.|+++....+.|-.--. -+| .+|| ...+++ ..|.
T Consensus 136 vp~~~~~~~----~~~~~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~~e~v~avr~-a~g~~~~l---~vDan~---~~~~ 203 (371)
T 2ps2_A 136 LPLISSIYV----GEPEDMRARVAKYRAKGYKGQ-SVKISGEPVTDAKRITAALA-NQQPDEFF---IVDANG---KLSV 203 (371)
T ss_dssp EEBEEEECS----CCHHHHHHHHHHHHTTTCCEE-EEECCSCHHHHHHHHHHHTT-TCCTTCEE---EEECTT---BCCH
T ss_pred eEEEEEeCC----CCHHHHHHHHHHHHHhChheE-EeecCCCHHHHHHHHHHHHH-hcCCCCEE---EEECCC---CcCH
Confidence 555665543 367777788888899998887 47777776544443321111 122 2333 112222 3466
Q ss_pred HHHHHHHHHH-HhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 300 EVFRDTLIEQ-AEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 300 e~~~d~ieeQ-AeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
++..+.+.+- .+.|| |+ |-|+. +++.+-++.++.++-+.
T Consensus 204 ~~a~~~~~~l~~~~~i-~i--------------------------------------E~P~~-~~~~~~~l~~~~~iPI~ 243 (371)
T 2ps2_A 204 ETALRLLRLLPHGLDF-AL--------------------------------------EAPCA-TWRECISLRRKTDIPII 243 (371)
T ss_dssp HHHHHHHHHSCTTCCC-EE--------------------------------------ECCBS-SHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHHhhcCC-cC--------------------------------------cCCcC-CHHHHHHHHhhCCCCEE
Confidence 7776666655 55566 54 34555 78888888888888888
Q ss_pred ccCCCCCCC---------ccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 379 IGDGLRPGS---------IYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 379 LGDGLRPG~---------iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
+++.++--. -+|. -|..++.-+-..-++++.|+++|++||+-+.. -.-|-...-+|.-
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~---es~i~~aa~~hla 312 (371)
T 2ps2_A 244 YDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETC---GSDIAFAAIVHLA 312 (371)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSS---CCHHHHHHHHHHH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCC---cCHHHHHHHHHHH
Confidence 887653100 0111 13344344444557788899999999985432 2334444444544
No 47
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=71.32 E-value=19 Score=37.32 Aligned_cols=132 Identities=12% Similarity=0.076 Sum_probs=76.1
Q ss_pred HHHHHHHhHhceeEeccC--CCCCCCccCCCc-----HHHHHHH-HHHHHHHHHHHhcCCe--EEeeCCCCCCCCchHHH
Q 005965 364 DEILDICNQYDVALSIGD--GLRPGSIYDAND-----TAQFAEL-LTQGELTRRAWDKDVQ--VMNEGPGHIPMHKIPEN 433 (667)
Q Consensus 364 D~ileI~k~YDVtlSLGD--GLRPG~iaDA~D-----~AQ~~EL-~~LGEL~krA~e~gVQ--VMIEGPGHVPl~~I~~N 433 (667)
+++++++++|++.+=|=- |..|....+..+ ..-+.|+ ..|.+++++|.++||. =+|==||.-.-...+.|
T Consensus 150 ~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~n 229 (318)
T 2vp8_A 150 PAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHG 229 (318)
T ss_dssp TTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHH
T ss_pred hHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHH
Confidence 478999999998876632 332543322221 2234554 6788999999999995 34445788888889999
Q ss_pred HHHHHHhc----CCCCccccCc-------cccccCCCchhH-HHhHHHHHhhhcccceeeecCcccccCCCChhHHHHHH
Q 005965 434 MQKQLEWC----NEAPFYTLGP-------LTTDIAPGYDHI-TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGV 501 (667)
Q Consensus 434 v~lqk~lC----~~APfYvLGP-------LvTDIApGYDHI-tsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDVreGV 501 (667)
+++-+.+- -+.|..+ |. -+++.-+ -|-+ .++.-.+++...||++| .+.||++=+
T Consensus 230 l~ll~~l~~l~~lg~PvL~-G~SrKsfig~~~g~~~-~~r~~~t~a~~~~a~~~Ga~Iv------------RvHDV~e~~ 295 (318)
T 2vp8_A 230 LLLLRHVADLVMTGWPVLM-ALSNKDVVGETLGVDL-TERLEGTLAATALAAAAGARMF------------RVHEVAATR 295 (318)
T ss_dssp HHHHHTHHHHHTTSSCBEE-CCC----------------CHHHHHHHHHHHHHTTCCEE------------EESCHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEE-EeCcchhhhhhcCCCh-HHhHHHHHHHHHHHHHCCCeEE------------EcCCHHHHH
Confidence 88877654 2455432 43 1222212 2333 33446678888899876 345676666
Q ss_pred HHHHHHHH
Q 005965 502 IAYKIAAH 509 (667)
Q Consensus 502 IA~kIAAH 509 (667)
-|.+++.-
T Consensus 296 ~a~~~~~a 303 (318)
T 2vp8_A 296 RVLEMVAS 303 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 48
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=71.31 E-value=3 Score=38.79 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
+.+.+.|+.-++-|+.++.+|.|......+ . + ...+. .-+.+.|.++++++++|+|+|.|
T Consensus 76 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~-----------~--~-~~~~~------~~~~~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 76 RRLLFGLDRAAELGADRAVFHSGIPHGRTP-----------E--E-ALERA------LPLAEALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTTCCH-----------H--H-HHHTH------HHHHHHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCccccc-----------c--c-HHHHH------HHHHHHHHHHHHHHhhcCCEEEE
Confidence 567778888889999999999985432110 0 0 01110 12356667777777777777776
Q ss_pred cCC
Q 005965 380 GDG 382 (667)
Q Consensus 380 GDG 382 (667)
=.-
T Consensus 136 En~ 138 (254)
T 3ayv_A 136 ENS 138 (254)
T ss_dssp ECS
T ss_pred cCC
Confidence 543
No 49
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=71.21 E-value=6.8 Score=41.93 Aligned_cols=88 Identities=26% Similarity=0.322 Sum_probs=61.5
Q ss_pred CCChHHHHHHHHHHHHhCCcEe---eecCCCCC-hHHHHHHHHhcCCCCcccchhhhHHHHh-cCCCCCCCHHHHHHHHH
Q 005965 233 ASSIEEEVYKVQWATMWGADTV---MDLSTGRH-IHETREWILRNSAVPVGTVPIYQALEKV-DGIAENLSWEVFRDTLI 307 (667)
Q Consensus 233 ~~~ieeEveKl~~A~~~GADtV---MDLSTGgd-i~~~R~~Il~nspvPVGTVPIYqAl~k~-~g~~~~lt~e~~~d~ie 307 (667)
..++++-++.+..+.+.|||.| +|+...-+ ...+++ +++.+++|+ ||--=.+. ||. -+.+++..++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~-l~~~~~~Pi----I~T~R~~~eGG~-~~~~~~~~~~ll~ 86 (523)
T 2o7s_A 13 ADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKT-IIKKSPLPT----LFTYRPKWEGGQ-YEGDENERRDVLR 86 (523)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHH-HHHHCSSCE----EEECCBGGGTSS-BCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHH-HHhcCCCcE----EEEecccccCCC-CCCCHHHHHHHHH
Confidence 3578888888888999999998 78775433 344544 446666664 33211111 454 5889999999999
Q ss_pred HHHhcCCCEEEEecccccc
Q 005965 308 EQAEQGVDYFTIHAGVLLR 326 (667)
Q Consensus 308 eQAeqGVDfmTIHaGv~~~ 326 (667)
.-++.|+||+.|-.....+
T Consensus 87 ~~~~~~~~yiDvEl~~~~~ 105 (523)
T 2o7s_A 87 LAMELGADYIDVELQVASE 105 (523)
T ss_dssp HHHHHTCSEEEEEHHHHHH
T ss_pred HHHHhCCCEEEEECCCchH
Confidence 9999999999987655433
No 50
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=70.78 E-value=76 Score=32.42 Aligned_cols=123 Identities=17% Similarity=0.210 Sum_probs=79.7
Q ss_pred HHHHHHHhHhceeEeccC--CCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCe---EEeeCCCCCCCCchHHHHHHH
Q 005965 364 DEILDICNQYDVALSIGD--GLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQ---VMNEGPGHIPMHKIPENMQKQ 437 (667)
Q Consensus 364 D~ileI~k~YDVtlSLGD--GLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQ---VMIEGPGHVPl~~I~~Nv~lq 437 (667)
+++++++++|++.+-|-= |. |. + .| -++| +..|.+++++|.++||. +++- ||.-+-...+.|..+-
T Consensus 149 ~~m~~~aa~~g~~vVlmh~~G~-p~--y--~d--~v~ev~~~l~~~i~~a~~~GI~~~~IilD-Pg~Gfgk~~~~n~~ll 220 (297)
T 1tx2_A 149 PKIAEVAAHYDVPIILMHNRDN-MN--Y--RN--LMADMIADLYDSIKIAKDAGVRDENIILD-PGIGFAKTPEQNLEAM 220 (297)
T ss_dssp THHHHHHHHHTCCEEEECCCSC-CC--C--SS--HHHHHHHHHHHHHHHHHHTTCCGGGEEEE-CCTTSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEeCCCC-CC--c--ch--HHHHHHHHHHHHHHHHHHcCCChhcEEEe-CCCCcCCCHHHHHHHH
Confidence 589999999998776532 21 33 1 12 2333 45688999999999997 7776 8987888899999888
Q ss_pred HHhcCCCCccccC-ccccccC-----------CCchhHHHh-HHHHHhhhcccceeeecCcccccCCCChhHHHHHHHHH
Q 005965 438 LEWCNEAPFYTLG-PLTTDIA-----------PGYDHITSA-IGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAY 504 (667)
Q Consensus 438 k~lC~~APfYvLG-PLvTDIA-----------pGYDHItsA-IGaA~aa~~GadfLCYVTPaEHLgLP~~eDVreGVIA~ 504 (667)
+++-. |--|| |+..=+. |--|-+.+. .-.++++..||+++=. .||++=+-|.
T Consensus 221 ~~l~~---l~~lg~Pvl~G~Srksfig~~~g~~~~~r~~~t~a~~~~a~~~ga~Ivrv------------hdV~e~~~a~ 285 (297)
T 1tx2_A 221 RNLEQ---LNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRV------------HDVKEMSRMA 285 (297)
T ss_dssp HTGGG---GGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEE------------SCHHHHHHHH
T ss_pred HHHHH---HHhCCCCEEEEeccchhhhhhcCCCHHHhHHHHHHHHHHHHHCCCcEEEe------------CCHHHHHHHH
Confidence 77642 22233 3322221 222333333 3567888889998743 5688777777
Q ss_pred HHHHH
Q 005965 505 KIAAH 509 (667)
Q Consensus 505 kIAAH 509 (667)
+++..
T Consensus 286 ~~~~a 290 (297)
T 1tx2_A 286 KMMDA 290 (297)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77644
No 51
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=70.11 E-value=19 Score=38.21 Aligned_cols=73 Identities=25% Similarity=0.339 Sum_probs=43.5
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCCh--HHHHHHHHhcCCCCc--ccchhhhHHHHhcCCCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRHI--HETREWILRNSAVPV--GTVPIYQALEKVDGIAE 295 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgdi--~~~R~~Il~nspvPV--GTVPIYqAl~k~~g~~~ 295 (667)
.-||+.+|+.. .+.++.++++|+|.|. |.+.|..- .++=+++-+..++|| |+|.
T Consensus 135 l~v~~~v~~~~--------~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~------------- 193 (400)
T 3ffs_A 135 LRVGAAIGVNE--------IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVV------------- 193 (400)
T ss_dssp BCCEEEECCC---------CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEEC-------------
T ss_pred eeEEeecCCCH--------HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecC-------------
Confidence 34667777652 5778899999999886 55555331 233344545445554 3442
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEe
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIH 320 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIH 320 (667)
|.++.. .-.+.|+|++.++
T Consensus 194 --t~e~A~----~a~~aGAD~I~vG 212 (400)
T 3ffs_A 194 --TEEATK----ELIENGADGIKVG 212 (400)
T ss_dssp --SHHHHH----HHHHTTCSEEEEC
T ss_pred --CHHHHH----HHHHcCCCEEEEe
Confidence 333332 2335699999983
No 52
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=70.02 E-value=1.6 Score=45.29 Aligned_cols=38 Identities=18% Similarity=0.315 Sum_probs=31.0
Q ss_pred cccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee
Q 005965 334 RMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA 376 (667)
Q Consensus 334 RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt 376 (667)
++.||+||+-.--.++...++- |.|+.||+|++ .-|+.
T Consensus 33 elvav~~~~~~~a~~~a~~~gv--~~~~~~~~l~~---~~D~v 70 (372)
T 4gmf_A 33 ELVGLLAQGSARSRELAHAFGI--PLYTSPEQITG---MPDIA 70 (372)
T ss_dssp EEEEEECCSSHHHHHHHHHTTC--CEESSGGGCCS---CCSEE
T ss_pred EEEEEECCCHHHHHHHHHHhCC--CEECCHHHHhc---CCCEE
Confidence 7999999999888888888775 68999999874 45654
No 53
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=68.28 E-value=7.6 Score=38.51 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=68.7
Q ss_pred CCceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCCCC-ChHHHHH---HHHhcCCCCcccch
Q 005965 210 LEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLSTGR-HIHETRE---WILRNSAVPVGTVP 282 (667)
Q Consensus 210 ~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLSTGg-di~~~R~---~Il~nspvPVGTVP 282 (667)
.+...||+|. .||=+.|- ..++++-++.+..+...|||.| +|+...- +...+.+ .+-+.. |.+|
T Consensus 10 v~~~~~g~~~-p~Icv~l~----~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~----~~~P 80 (257)
T 2yr1_A 10 VRNIWIGGTE-PCICAPVV----GEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIA----GEIP 80 (257)
T ss_dssp ETTEEESSSS-CEEEEEEC----CSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHS----SSCC
T ss_pred EeeeeeCCCC-cEEEEEec----CCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhc----cCCC
Confidence 4456677654 47777662 3577777888999999999997 7876543 3433332 222332 3445
Q ss_pred hhhHHH--HhcCCCCCCCHHHHHHHHHHHHhcC-CCEEEEecc
Q 005965 283 IYQALE--KVDGIAENLSWEVFRDTLIEQAEQG-VDYFTIHAG 322 (667)
Q Consensus 283 IYqAl~--k~~g~~~~lt~e~~~d~ieeQAeqG-VDfmTIHaG 322 (667)
|-=.+. .-||...+.+.+.+++.++.-++.| +||+.|-.-
T Consensus 81 iI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~ 123 (257)
T 2yr1_A 81 ILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELA 123 (257)
T ss_dssp EEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGG
T ss_pred EEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 433332 1256544899999999999999999 999998653
No 54
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=68.26 E-value=17 Score=35.67 Aligned_cols=116 Identities=15% Similarity=0.085 Sum_probs=64.1
Q ss_pred HHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcC-----------------------CCCCC
Q 005965 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDG-----------------------IAENL 297 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g-----------------------~~~~l 297 (667)
.-+..+++.|.-||.|+.. ....+|+.+-.....-..-++-...+...+| ...--
T Consensus 92 ~~~~~~l~~GvTtv~d~~~--~~~~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (423)
T 3feq_A 92 PILDAMLSRGFTSVRDAGG--ADWSLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVD 169 (423)
T ss_dssp HHHHHHHHTTEEEEEECSS--CCHHHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCTTCSEEECC
T ss_pred HHHHHHHhCCeEEEEeCCC--chHHHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccccccceecC
Confidence 3456679999999999854 4457887765432110000000000000000 01123
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
+.+++++.++++.+.|+|++-+++. + |+.|+.+ -+....+-.+.|.++++.++++++.+
T Consensus 170 ~~~~~~~~v~~~~~~g~~~ik~~~~----------g---~~~~~~~--------p~~~~~~~~e~l~~~~~~A~~~g~~v 228 (423)
T 3feq_A 170 GVEGVRLAVREEIQKGATQIKIMAS----------G---GVASPTD--------PIANTQYSEDEIRAIVDEAEAANTYV 228 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSSEEEECB----------C---CSSSSSC--------CTTSBCSCHHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc----------C---CcCCCCC--------CcccccCCHHHHHHHHHHHHHCCCeE
Confidence 5688999999999999999988863 1 1222210 01222334466777777777777666
Q ss_pred ec
Q 005965 378 SI 379 (667)
Q Consensus 378 SL 379 (667)
.+
T Consensus 229 ~~ 230 (423)
T 3feq_A 229 MA 230 (423)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 55
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=68.15 E-value=43 Score=30.61 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=83.5
Q ss_pred ChHHHHHHHHHHHHhCCcEee-ecCCCCC---hHHHHHHHHhcCCCCcc--cchhhhHHHHhcCCCCCCCHHHHHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVM-DLSTGRH---IHETREWILRNSAVPVG--TVPIYQALEKVDGIAENLSWEVFRDTLIE 308 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVM-DLSTGgd---i~~~R~~Il~nspvPVG--TVPIYqAl~k~~g~~~~lt~e~~~d~iee 308 (667)
+.++=.+-++.+.+.|+|.|- .+.+..- |.++|+.. . ..+++| || .|.++ +++
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~-~-~~~~ig~~~v---------------~~~~~----~~~ 78 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLK-E-KGAIIGAGTV---------------TSVEQ----CRK 78 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHH-H-TTCEEEEESC---------------CSHHH----HHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHC-C-CCcEEEeccc---------------CCHHH----HHH
Confidence 444444556677788999882 2244211 33444432 1 123333 33 24443 344
Q ss_pred HHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCc
Q 005965 309 QAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSI 388 (667)
Q Consensus 309 QAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~i 388 (667)
-.+.|+||+ +|.+.. .++++.|+++++.+-- |+.
T Consensus 79 a~~~Gad~i-v~~~~~---------------------------------------~~~~~~~~~~g~~vi~------g~~ 112 (205)
T 1wa3_A 79 AVESGAEFI-VSPHLD---------------------------------------EEISQFCKEKGVFYMP------GVM 112 (205)
T ss_dssp HHHHTCSEE-ECSSCC---------------------------------------HHHHHHHHHHTCEEEC------EEC
T ss_pred HHHcCCCEE-EcCCCC---------------------------------------HHHHHHHHHcCCcEEC------CcC
Confidence 455899999 887721 3688999999998753 331
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcC---CCCccccCccccccCCCchhHHH
Q 005965 389 YDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCN---EAPFYTLGPLTTDIAPGYDHITS 465 (667)
Q Consensus 389 aDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~---~APfYvLGPLvTDIApGYDHIts 465 (667)
+.. | +++|++.|+...---|+.. ..+..-++++. +.|+...|=+.. +.+..
T Consensus 113 ----t~~---e-------~~~a~~~Gad~vk~~~~~~------~g~~~~~~l~~~~~~~pvia~GGI~~------~~~~~ 166 (205)
T 1wa3_A 113 ----TPT---E-------LVKAMKLGHTILKLFPGEV------VGPQFVKAMKGPFPNVKFVPTGGVNL------DNVCE 166 (205)
T ss_dssp ----SHH---H-------HHHHHHTTCCEEEETTHHH------HHHHHHHHHHTTCTTCEEEEBSSCCT------TTHHH
T ss_pred ----CHH---H-------HHHHHHcCCCEEEEcCccc------cCHHHHHHHHHhCCCCcEEEcCCCCH------HHHHH
Confidence 111 1 5578999999765444210 12333333433 677777776532 44544
Q ss_pred hHHHHHhhhcccceeeecC
Q 005965 466 AIGAANIGALGTALLCYVT 484 (667)
Q Consensus 466 AIGaA~aa~~GadfLCYVT 484 (667)
.+ .+|||.++--|
T Consensus 167 ~~------~~Ga~~v~vGs 179 (205)
T 1wa3_A 167 WF------KAGVLAVGVGS 179 (205)
T ss_dssp HH------HHTCSCEEECH
T ss_pred HH------HCCCCEEEECc
Confidence 33 46777776654
No 56
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=67.37 E-value=5 Score=39.83 Aligned_cols=93 Identities=18% Similarity=0.117 Sum_probs=59.0
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCCCCChHHHHHHHHhcCCCCcc-cch---hhhHHHHhcCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLSTGRHIHETREWILRNSAVPVG-TVP---IYQALEKVDGI 293 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLSTGgdi~~~R~~Il~nspvPVG-TVP---IYqAl~k~~g~ 293 (667)
+||.+-+|-.....+.+.-+.-.+.|++.|||-| +++.-- ...+.+.|-+-...--+ -+| |++.
T Consensus 72 v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdEID~vinig~~--~~~v~~ei~~v~~a~~~~g~~lKvIlEt------- 142 (234)
T 1n7k_A 72 VKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATELDVVPHLSLG--PEAVYREVSGIVKLAKSYGAVVKVILEA------- 142 (234)
T ss_dssp CCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGGC--HHHHHHHHHHHHHHHHHTTCEEEEECCG-------
T ss_pred ceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccchHH--HHHHHHHHHHHHHHHhhcCCeEEEEEec-------
Confidence 6777777665555667777788899999999988 444322 22444443322111000 124 3332
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 294 AENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 294 ~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
..||.|.+....+--++.|.||+-.-.|.
T Consensus 143 -~~L~~e~i~~a~ria~eaGADfVKTsTG~ 171 (234)
T 1n7k_A 143 -PLWDDKTLSLLVDSSRRAGADIVKTSTGV 171 (234)
T ss_dssp -GGSCHHHHHHHHHHHHHTTCSEEESCCSS
T ss_pred -cCCCHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 23688999999999999999999766443
No 57
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=67.08 E-value=1.1e+02 Score=30.84 Aligned_cols=149 Identities=14% Similarity=0.170 Sum_probs=82.9
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHH-HHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENLSWEVFR-DTLIEQA 310 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~-d~ieeQA 310 (667)
+.++-++.++.+.+.|-++| .+-.|.++....+.|- |.. +| .+||. ..+++ ..|.++.. +.+.+-.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~~e~v~avr~a---~g~~~~l~---vDan~---~~~~~~a~~~~~~~l~ 210 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSF-KMKVGTNVKEDVKRIEAVRER---VGNDIAIR---VDVNQ---GWKNSANTLTALRSLG 210 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEE-EEECCSCHHHHHHHHHHHHHH---HCTTSEEE---EECTT---TTBSHHHHHHHHHTST
T ss_pred ChHHHHHHHHHHHHcCcCEE-EEEeCCCHHHHHHHHHHHHHH---hCCCCeEE---EECCC---CCCHHHHHHHHHHHHH
Confidence 56777788888999998877 4767766543333221 111 11 23330 11122 24556666 6666655
Q ss_pred hcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCCCcc
Q 005965 311 EQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPGSIY 389 (667)
Q Consensus 311 eqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~ia 389 (667)
+.||+|+- -|+ ..+++.+-++.++.++-+.+|+.+ .
T Consensus 211 ~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~iPI~~dE~~-----~ 247 (369)
T 2p8b_A 211 HLNIDWIE--------------------------------------QPVIADDIDAMAHIRSKTDLPLMIDEGL-----K 247 (369)
T ss_dssp TSCCSCEE--------------------------------------CCBCTTCHHHHHHHHHTCCSCEEESTTC-----C
T ss_pred hCCCcEEE--------------------------------------CCCCcccHHHHHHHHHhCCCCEEeCCCC-----C
Confidence 66787653 121 135677777777777777777654 2
Q ss_pred CCC----------------cHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 390 DAN----------------DTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 390 DA~----------------D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
+.. |..++.-+-..-++++.|.++|++||+-+.+. .-|-...-+|.-
T Consensus 248 ~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e---s~i~~~a~~~la 310 (369)
T 2p8b_A 248 SSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE---SSVASSAGFHVA 310 (369)
T ss_dssp SHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC---CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc---cHHHHHHHHHHH
Confidence 211 22222223333477888999999999755432 334444444444
No 58
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=66.83 E-value=17 Score=34.34 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHH
Q 005965 360 YEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQ 437 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lq 437 (667)
.+.|.+.+++|++.++. +.+.-|..|+. .++ ++.. ...|.+|.+.|.++||.+.+|- |. +...+-.++-
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~----~~~-~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~--~~~~~~~~l~ 171 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPES----SSP-DYSELVRVTQDLLTHAANHGQAVHLET--GQ--ESADHLLEFI 171 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCT----TSH-HHHHHHHHHHHHHHHHHTTTCEEEEEC--CS--SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCccc----chH-HHHHHHHHHHHHHHHHHHcCCEEEEec--CC--CCHHHHHHHH
Confidence 57899999999999864 44444555643 222 3333 3468899999999999999996 32 3444444444
Q ss_pred HH
Q 005965 438 LE 439 (667)
Q Consensus 438 k~ 439 (667)
++
T Consensus 172 ~~ 173 (290)
T 3tva_A 172 ED 173 (290)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 59
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=66.83 E-value=26 Score=35.78 Aligned_cols=163 Identities=9% Similarity=-0.019 Sum_probs=96.6
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCC-ChHH--HHHHHHhcC--CCCcccchhhhHHHHhcCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGR-HIHE--TREWILRNS--AVPVGTVPIYQALEKVDGIA 294 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGg-di~~--~R~~Il~ns--pvPVGTVPIYqAl~k~~g~~ 294 (667)
++.+++.+|.- .++++=.+.++.+.+.|-|+|= |-.|+ ++.. +=+.|.+.. .+++. ..++
T Consensus 152 ~vp~~~~~g~~---~~~e~~~~~a~~~~~~Gf~~vK-ik~g~~~~~~~e~v~avr~a~g~d~~l~--------vDan--- 216 (388)
T 2nql_A 152 SFPAYVSGLPE---RTLKARGELAKYWQDRGFNAFK-FATPVADDGPAAEIANLRQVLGPQAKIA--------ADMH--- 216 (388)
T ss_dssp EEEEEEECCCC---SSHHHHHHHHHHHHHTTCCEEE-EEGGGCTTCHHHHHHHHHHHHCTTSEEE--------EECC---
T ss_pred ceEeeEEeCCC---CCHHHHHHHHHHHHHhCCCEEE-EeCCCCChHHHHHHHHHHHHhCCCCEEE--------EECC---
Confidence 34556555421 3777778888999999988874 65554 4322 111111111 12222 0223
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHh
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQY 373 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~Y 373 (667)
..+|.++..+.+.+-.+.||+|+- -|+ ..+++.+-++.++.
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~ 258 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE--------------------------------------APVWTEDIAGLEKVSKNT 258 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE--------------------------------------CCSCTTCHHHHHHHHTSC
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE--------------------------------------CCCChhhHHHHHHHHhhC
Confidence 245778888888776677999862 122 13577777777778
Q ss_pred ceeEeccCCCCCC---------CccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 374 DVALSIGDGLRPG---------SIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 374 DVtlSLGDGLRPG---------~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
++-+.+++.++-- .-+|. -|..+ .-+-..-++++.|.++|++||+-+ +.-.-|-...-+|.-
T Consensus 259 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~h~---~~es~i~~aa~~hla 331 (388)
T 2nql_A 259 DVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVIPHA---TVGAGIFLAASLQAS 331 (388)
T ss_dssp CSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEECCCC---CSSCSHHHHHHHHHH
T ss_pred CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEeec---CCCcHHHHHHHHHHH
Confidence 8888887776520 00111 24455 556666678889999999999832 444555555555554
No 60
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=66.34 E-value=7.5 Score=36.63 Aligned_cols=80 Identities=4% Similarity=-0.081 Sum_probs=48.4
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCC-CChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTG-RHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTG-gdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
++++- ++.+.++|.|.| +|... .++.++|+.+ +...+.+-.++ |...-. ....+-..+.+.+.|+.-++-|
T Consensus 32 ~~~~~---l~~~~~~G~~~v-El~~~~~~~~~~~~~l-~~~gl~~~~~~-~~~~~~--~~~~~~~~~~~~~~i~~a~~lG 103 (301)
T 3cny_A 32 NLQQL---LSDIVVAGFQGT-EVGGFFPGPEKLNYEL-KLRNLEIAGQW-FSSYII--RDGIEKASEAFEKHCQYLKAIN 103 (301)
T ss_dssp CHHHH---HHHHHHHTCCEE-CCCTTCCCHHHHHHHH-HHTTCEECEEE-EEECHH--HHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHH---HHHHHHhCCCEE-EecCCCCCHHHHHHHH-HHCCCeEEEEe-ccCCCC--hhhHHHHHHHHHHHHHHHHHcC
Confidence 45544 445667899987 45411 1678887655 56667666652 221100 0001112467788888888999
Q ss_pred CCEEEEecc
Q 005965 314 VDYFTIHAG 322 (667)
Q Consensus 314 VDfmTIHaG 322 (667)
++++.+|.+
T Consensus 104 ~~~v~~~~~ 112 (301)
T 3cny_A 104 APVAVVSEQ 112 (301)
T ss_dssp CCEEEEEEC
T ss_pred CCEEEecCC
Confidence 999999974
No 61
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=66.33 E-value=76 Score=32.35 Aligned_cols=89 Identities=17% Similarity=0.294 Sum_probs=59.1
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecCC---CCChHHHHHHHHhcCCCCc--cc----chhhhHH--HHh----------cC
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLST---GRHIHETREWILRNSAVPV--GT----VPIYQAL--EKV----------DG 292 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLST---Ggdi~~~R~~Il~nspvPV--GT----VPIYqAl--~k~----------~g 292 (667)
.+.+.=+++|+...++|..||.|.++ |.|+..+++ |-+.+.|.| +| -|.|.+. .+. ..
T Consensus 43 ~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~-is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (330)
T 3pnz_A 43 DDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQ-ISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYE 121 (330)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHH-HHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHH
T ss_pred cCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHH-HHHHhCCEEEEeCCCCccccccccccccccccccccccCch
Confidence 35666667777788899999999984 778888766 556666654 11 2233110 000 01
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
-+..++.|++-+.+.+..++|++-.-|-|||
T Consensus 122 ~~~~~~~e~l~~~~~~ei~~Gi~~t~vkaGv 152 (330)
T 3pnz_A 122 WIENTTTDKLTEFVVNEVENGLEGTPYKAGQ 152 (330)
T ss_dssp HHHTSCHHHHHHHHHHHHHTCSTTSSCCEEE
T ss_pred hhccCCHHHHHHHHHHHHHhhCCCcCcCcCe
Confidence 1356788999999999999999765555555
No 62
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=66.21 E-value=27 Score=36.33 Aligned_cols=172 Identities=13% Similarity=0.056 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHH-hcCCCEEEEecc-ccccc-----------cccccCcccCccccc--------cHHHHHHHHHcCC-c
Q 005965 299 WEVFRDTLIEQA-EQGVDYFTIHAG-VLLRY-----------IPLTAKRMTGIVSRG--------GSIHAKWCLAYHK-E 356 (667)
Q Consensus 299 ~e~~~d~ieeQA-eqGVDfmTIHaG-v~~~~-----------l~~~~~RvtgIVSRG--------GSi~a~Wml~h~~-E 356 (667)
+++..+.-.+|. ++|.|++.|.+- ..... ++....++.=.+|=- -..+ .-.+.... .
T Consensus 79 ~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~-eaAleagag~ 157 (323)
T 4djd_D 79 INEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVL-EAVAEAAAGE 157 (323)
T ss_dssp TTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHH-HHHHHHTTTS
T ss_pred HHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHH-HHHHHhcCCC
Confidence 345778888888 999999999853 33321 111112221122222 2333 33343343 3
Q ss_pred Cch-----hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCC--eEEeeCCCCCCC-C
Q 005965 357 NFA-----YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDV--QVMNEGPGHIPM-H 428 (667)
Q Consensus 357 NpL-----Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gV--QVMIEGPGHVPl-~ 428 (667)
+++ .++|+++++++++|++.+-+-= | . | +..+-+|.++|.++|| +=+|=-||--|+ .
T Consensus 158 ~~lINsv~~~~~~~m~~laa~~g~~vVlmh---~---~---d------~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk 222 (323)
T 4djd_D 158 NLLLGNAEQENYKSLTAACMVHKHNIIARS---P---L---D------INICKQLNILINEMNLPLDHIVIDPSIGGLGY 222 (323)
T ss_dssp CCEEEEEBTTBCHHHHHHHHHHTCEEEEEC---S---S---C------HHHHHHHHHHHHTTTCCGGGEEEECCCCCTTT
T ss_pred CCeEEECCcccHHHHHHHHHHhCCeEEEEc---c---c---h------HHHHHHHHHHHHHcCCCHHHEEEeCCCccccC
Confidence 444 4678999999999998877631 1 1 2 2356688899999999 557777888776 4
Q ss_pred chHHHHHHHHHhcCCC--CccccC-ccccc----------------cCCCc------hhHHHhHHHHHhhhcccceeeec
Q 005965 429 KIPENMQKQLEWCNEA--PFYTLG-PLTTD----------------IAPGY------DHITSAIGAANIGALGTALLCYV 483 (667)
Q Consensus 429 ~I~~Nv~lqk~lC~~A--PfYvLG-PLvTD----------------IApGY------DHItsAIGaA~aa~~GadfLCYV 483 (667)
.++.|+.+.+++-.-| -|-.|| |+..- ..|.+ +-+-=++-|+.-...|+|.++.-
T Consensus 223 ~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~~~i~v~~ 302 (323)
T 4djd_D 223 GIEYSFSIMERIRLGALQGDKMLSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAGAHILLMR 302 (323)
T ss_dssp THHHHHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHHhhcccccCCCCEEEecchhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhcCCEEEEc
Confidence 6778877766653200 122344 43332 22222 22234556666667788888876
Q ss_pred Ccc
Q 005965 484 TPK 486 (667)
Q Consensus 484 TPa 486 (667)
-|.
T Consensus 303 ~p~ 305 (323)
T 4djd_D 303 HPE 305 (323)
T ss_dssp CHH
T ss_pred CHH
Confidence 553
No 63
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=66.11 E-value=1e+02 Score=31.69 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=84.4
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCC-ChH-------HHHHHHHhcCCCCcccchhhhHHHHhcC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGR-HIH-------ETREWILRNSAVPVGTVPIYQALEKVDG 292 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGg-di~-------~~R~~Il~nspvPVGTVPIYqAl~k~~g 292 (667)
+.+++++|. .+.++.+++++.+++.|-.++ -+-.|. +++ .+|+.+ ...++.| .+++
T Consensus 138 v~~~~t~~~----~~~~~~~~~a~~~~~~G~~~~-K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~v----------Dan~ 201 (385)
T 3i6e_A 138 IPLSCSIAN----PDFDADIALMERLRADGVGLI-KLKTGFRDHAFDIMRLELIARDF-PEFRVRV----------DYNQ 201 (385)
T ss_dssp EEBEEEECC----SSHHHHHHHHHHHHHHTCCEE-EEECSSSCHHHHHHHHHHHHHHC-TTSEEEE----------ECTT
T ss_pred eEEEEEcCC----CCHHHHHHHHHHHHHcCCCEE-EEecCCCCHHHHHHHHHHHHHhC-CCCeEEE----------ECCC
Confidence 455666652 367777888888888897765 454454 222 222222 2111111 1122
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh-hhHHHHHHHHh
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHWDEILDICN 371 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~FD~ileI~k 371 (667)
..|.++..+.+.+-.+.|++|+ |=|+- .+++.+-++.+
T Consensus 202 ---~~~~~~A~~~~~~L~~~~i~~i--------------------------------------EqP~~~~d~~~~~~l~~ 240 (385)
T 3i6e_A 202 ---GLEIDEAVPRVLDVAQFQPDFI--------------------------------------EQPVRAHHFELMARLRG 240 (385)
T ss_dssp ---CCCGGGHHHHHHHHHTTCCSCE--------------------------------------ECCSCTTCHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHHHhcCCCEE--------------------------------------ECCCCcccHHHHHHHHH
Confidence 2344444444444445566665 22432 35777777777
Q ss_pred HhceeEeccCCCCCCCccC--------C-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHH
Q 005965 372 QYDVALSIGDGLRPGSIYD--------A-----NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQL 438 (667)
Q Consensus 372 ~YDVtlSLGDGLRPG~iaD--------A-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk 438 (667)
+.++-+.+|..+.- ..| + -|..++.-|...-++++.|.++|++||+ ||+.-.-|-...-+|.
T Consensus 241 ~~~iPIa~dE~~~~--~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~---~~~~es~i~~aa~~hl 315 (385)
T 3i6e_A 241 LTDVPLLADESVYG--PEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYG---GDMFEAGLAHLAGTHM 315 (385)
T ss_dssp TCSSCEEESTTCCS--HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE---CCCSCCHHHHHHHHHH
T ss_pred hCCCCEEEeCCcCC--HHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEe---CCCCccHHHHHHHHHH
Confidence 77888887765421 100 0 0122222233334577789999999986 5655455555555554
Q ss_pred H
Q 005965 439 E 439 (667)
Q Consensus 439 ~ 439 (667)
-
T Consensus 316 a 316 (385)
T 3i6e_A 316 I 316 (385)
T ss_dssp H
T ss_pred H
Confidence 4
No 64
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=64.92 E-value=6.9 Score=39.37 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=64.0
Q ss_pred CceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCCCCCh-HHHHHH---HHhcC-CCCcccch
Q 005965 211 EPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLSTGRHI-HETREW---ILRNS-AVPVGTVP 282 (667)
Q Consensus 211 ~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLSTGgdi-~~~R~~---Il~ns-pvPVGTVP 282 (667)
+.+.||+| +.||=+.| ...++++-++.++.+...|||.| +|+...-+. +.+.+. |-+.. .+|
T Consensus 31 ~~~~~g~g-~p~i~v~l----~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~P----- 100 (276)
T 3o1n_A 31 RDLVVGEG-APKIIVSL----MGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKP----- 100 (276)
T ss_dssp TTEEETSS-SCEEEEEE----CCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSC-----
T ss_pred CCEEeCCC-CcEEEEEe----CCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCC-----
Confidence 44566665 45665555 34567777777777777999988 687765432 444432 22222 344
Q ss_pred hhhHHH--HhcCCCCCCCHHHHHHHHHHHHhcC-CCEEEEec
Q 005965 283 IYQALE--KVDGIAENLSWEVFRDTLIEQAEQG-VDYFTIHA 321 (667)
Q Consensus 283 IYqAl~--k~~g~~~~lt~e~~~d~ieeQAeqG-VDfmTIHa 321 (667)
|-=.+. +-||. -.++.+.+++.++.-++.| |||+.|=-
T Consensus 101 iI~T~Rt~~eGG~-~~~~~~~~~~ll~~~l~~g~~dyIDvEl 141 (276)
T 3o1n_A 101 LLFTFRSAKEGGE-QALTTGQYIDLNRAAVDSGLVDMIDLEL 141 (276)
T ss_dssp EEEECCBGGGTCS-BCCCHHHHHHHHHHHHHHTCCSEEEEEG
T ss_pred EEEEEEEhhhCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 222221 11555 4589999999999999999 99999854
No 65
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=64.18 E-value=38 Score=36.01 Aligned_cols=119 Identities=15% Similarity=0.203 Sum_probs=66.0
Q ss_pred CCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCChH---HHHHHHHhcC-CCCcc--cchhhhHHHHh
Q 005965 218 NFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRHIH---ETREWILRNS-AVPVG--TVPIYQALEKV 290 (667)
Q Consensus 218 gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgdi~---~~R~~Il~ns-pvPVG--TVPIYqAl~k~ 290 (667)
+-+..+-+++|.... ..+.++.++++|+|.|- |.+-| +.. ++=++|-+.. .+||. +|
T Consensus 241 ~~rl~vga~vG~~~~------~~~~a~~~~~aG~d~v~i~~~~G-~~~~~~~~i~~i~~~~~~~pvi~~~v--------- 304 (514)
T 1jcn_A 241 QKQLLCGAAVGTRED------DKYRLDLLTQAGVDVIVLDSSQG-NSVYQIAMVHYIKQKYPHLQVIGGNV--------- 304 (514)
T ss_dssp TSCBCCEEEECSSTT------HHHHHHHHHHTTCSEEEECCSCC-CSHHHHHHHHHHHHHCTTCEEEEEEE---------
T ss_pred CCceeeeeEecCchh------hHHHHHHHHHcCCCEEEeeccCC-cchhHHHHHHHHHHhCCCCceEeccc---------
Confidence 445556777776543 35677778899999764 44544 332 3345555555 45553 23
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEE--eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTI--HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILD 368 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTI--HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ile 368 (667)
.|.++ .++-.+.|||++.+ |.|-... .|.. .+---|.-..++.+-+
T Consensus 305 ------~t~~~----a~~l~~aGad~I~vg~~~G~~~~------t~~~----------------~~~g~~~~~~~~~~~~ 352 (514)
T 1jcn_A 305 ------VTAAQ----AKNLIDAGVDGLRVGMGCGSICI------TQEV----------------MACGRPQGTAVYKVAE 352 (514)
T ss_dssp ------CSHHH----HHHHHHHTCSEEEECSSCSCCBT------TBCC----------------CSCCCCHHHHHHHHHH
T ss_pred ------chHHH----HHHHHHcCCCEEEECCCCCcccc------cccc----------------cCCCccchhHHHHHHH
Confidence 34443 44445689999977 4442110 0110 0001123445677888
Q ss_pred HHhHhceeEeccCCCC
Q 005965 369 ICNQYDVALSIGDGLR 384 (667)
Q Consensus 369 I~k~YDVtlSLGDGLR 384 (667)
+++++++.+-.-=|+|
T Consensus 353 ~~~~~~ipVia~GGI~ 368 (514)
T 1jcn_A 353 YARRFGVPIIADGGIQ 368 (514)
T ss_dssp HHGGGTCCEEEESCCC
T ss_pred HHhhCCCCEEEECCCC
Confidence 8888888775544444
No 66
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=64.09 E-value=40 Score=34.94 Aligned_cols=210 Identities=16% Similarity=0.131 Sum_probs=123.0
Q ss_pred CChHHHHHHHHHHHHhCCcEeeec---CCCCC-------hHHHHHHHHhcCCCCcccchhhhHHHHhcC---CCCCCCHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDL---STGRH-------IHETREWILRNSAVPVGTVPIYQALEKVDG---IAENLSWE 300 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDL---STGgd-------i~~~R~~Il~nspvPVGTVPIYqAl~k~~g---~~~~lt~e 300 (667)
.+++.=+++++.-++.||| |.|+ ||... +.+ -+++-| .+|+-+++.+.-+ ++.-..++
T Consensus 46 ~~~~~al~~A~~~v~~GAd-IIDIGgeSTrPga~~~~~~V~~-~eE~~R-------v~pvI~~l~~~~~vpISIDT~~~~ 116 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGAD-ILDIGGEATNPFVDIKTDSPST-QIELDR-------LLPVIDAIKKRFPQLISVDTSRPR 116 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCS-EEEEECCCSCTTC-----CHHH-HHHHHH-------HHHHHHHHHHHCCSEEEEECSCHH
T ss_pred CCHHHHHHHHHHHHHCCCC-EEEECCCCCCCCcccccCCCCH-HHHHHH-------HHHHHHHHHhhCCCeEEEeCCCHH
Confidence 4677888999999999999 6686 44322 211 111111 1456666654322 33445566
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
.+...|+ .|+|++- =|| -++ +|++++++++|++.+=|=
T Consensus 117 Va~aAl~----aGa~iIN-------------------DVs--------------g~~-----~~~m~~v~a~~g~~vVlM 154 (314)
T 3tr9_A 117 VMREAVN----TGADMIN-------------------DQR--------------ALQ-----LDDALTTVSALKTPVCLM 154 (314)
T ss_dssp HHHHHHH----HTCCEEE-------------------ETT--------------TTC-----STTHHHHHHHHTCCEEEE
T ss_pred HHHHHHH----cCCCEEE-------------------ECC--------------CCC-----chHHHHHHHHhCCeEEEE
Confidence 6555555 3777541 111 112 468999999999887764
Q ss_pred CCC-CCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCC---eEEeeCCCCC---CCCchHHHHHHHHHh----cCCCCccc
Q 005965 381 DGL-RPGSIYDANDTAQFAE-LLTQGELTRRAWDKDV---QVMNEGPGHI---PMHKIPENMQKQLEW----CNEAPFYT 448 (667)
Q Consensus 381 DGL-RPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gV---QVMIEGPGHV---Pl~~I~~Nv~lqk~l----C~~APfYv 448 (667)
.-- .|....+..+-.-++| +..|.+.+++|.++|| ++++- ||.= --...+.|.++-+.+ .-+.|..+
T Consensus 155 h~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilD-PG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~ 233 (314)
T 3tr9_A 155 HFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIID-PGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLS 233 (314)
T ss_dssp CCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEE-CCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEE
T ss_pred CCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEe-CCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEE
Confidence 310 1333222222211233 4468889999999999 57764 5654 345678898887775 44677654
Q ss_pred cCc--------cccccCC-CchhHHHhHHHHHhhhcccceeeecCcccccCCCChhHHHHHHHHHHHHHHH
Q 005965 449 LGP--------LTTDIAP-GYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHA 510 (667)
Q Consensus 449 LGP--------LvTDIAp-GYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDVreGVIA~kIAAHa 510 (667)
|. ++ +.-+ .-+-.| +.-++++...||++| .+-||++=+-|.|++.-.
T Consensus 234 -G~SRKsfig~~~-~~~~~~R~~~t-~a~~~~a~~~Ga~Iv------------RvHDV~e~~~a~~~~~a~ 289 (314)
T 3tr9_A 234 -GWSRKSMIGDVL-NQPPENRLFGS-IAADVLAVYHGASII------------RTHDVKATREAIKIATYT 289 (314)
T ss_dssp -CCTTCHHHHHHH-TCCGGGCHHHH-HHHHHHHHHTTCSEE------------EESCHHHHHHHHHHHHHH
T ss_pred -Eechhhhhhhhc-CCChHHhHHHH-HHHHHHHHHcCCcEE------------EeCChHHHHHHHHHHHHH
Confidence 33 22 2212 233333 334678888999987 345688877777776544
No 67
>1ccw_B Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.1.19.2 PDB: 1cb7_B* 1i9c_B*
Probab=63.85 E-value=6.8 Score=42.98 Aligned_cols=303 Identities=16% Similarity=0.174 Sum_probs=164.6
Q ss_pred CCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCC-c---EeeecCCC
Q 005965 185 LDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGA-D---TVMDLSTG 260 (667)
Q Consensus 185 i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GA-D---tVMDLSTG 260 (667)
.-+++|++.++.|+.+|= | -....++++-.+.++.-.+.|. | +-.|+.|-
T Consensus 47 ~f~~~l~~~~~~~~~liq---------p-----------------~aGf~t~eet~~~~~~L~~~G~~~vLsva~D~~Tq 100 (483)
T 1ccw_B 47 NFAEKLVLAKKKGITMAQ---------P-----------------RAGVALLDEHIELLRYLQDEGGADFLPSTIDAYTR 100 (483)
T ss_dssp CHHHHHHHHHHHTCCEEE---------C-----------------CCCCSSHHHHHHHHHHHHHTTCCSSEEEEBCTTGG
T ss_pred chHHHHHHHHHcCCeeec---------C-----------------CCCCCCHHHHHHHHHHHHhCCCCCeeccccCccch
Confidence 347889999999985542 2 1223468888888888888884 3 23444443
Q ss_pred C-ChHHHHHHH---HhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCccc
Q 005965 261 R-HIHETREWI---LRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMT 336 (667)
Q Consensus 261 g-di~~~R~~I---l~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~Rvt 336 (667)
- +..+....| ++....-.+-+|+=.- +++..+..+ -++|++.=-.|-....+.+....-|-+
T Consensus 101 ~~e~g~~g~ai~~s~~d~~~llnGiPl~~~-----------~~s~t~amy---e~~~~P~~~r~GT~q~d~L~E~~~~~g 166 (483)
T 1ccw_B 101 QNRYDECENGIKESEKAGRSLLNGFPGVNF-----------GVKGCRKVL---EAVNLPLQARHGTPDSRLLAEIIHAGG 166 (483)
T ss_dssp GTCHHHHHHHHHHHHHHTSCCSSSBCHHHH-----------HHHHHHHHH---HHCSSCEEEECCCSCCHHHHHHHHHTT
T ss_pred hhhhhHHHHHHhhhHhhhHhhcCCCCcccc-----------CHHHHHHHH---HhcCCCHHhccCCCcHHHHHHHHHHhC
Confidence 2 222222222 2234444555555331 223333444 566788877774333333332222222
Q ss_pred CccccccHHHHHHHHHcCCcCchh---hhH---HHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHH
Q 005965 337 GIVSRGGSIHAKWCLAYHKENFAY---EHW---DEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRA 410 (667)
Q Consensus 337 gIVSRGGSi~a~Wml~h~~ENpLY---e~F---D~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA 410 (667)
--=.-||-| .|+.--.+.-||= .+| |++|-..++..++.-+ +-+=|......-+.-..+ +-.|-.| .|
T Consensus 167 ~~a~eggpi--sy~~P~~k~~sl~~~id~~qy~~~~~~~~~E~G~~~n~-E~fg~l~~qev~~tla~a-iaylea~--la 240 (483)
T 1ccw_B 167 WTSNEGGGI--SYNVPYAKNVTIEKSLLDWQYCDRLVGFYEEQGVHINR-EPFGPLTGTLVPPSMSNA-VGITEAL--LA 240 (483)
T ss_dssp CCEEECCTT--TTTTTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCEE-ECCTTTTSSSCCHHHHHH-HHHHHHH--HH
T ss_pred ccccccCce--eEecCCCCCCCHHHHHHHHHHHHHHhhHHHhCCCCccc-cccCCcccccCchHHHHH-HHHHHHH--HH
Confidence 111122222 2444444322321 123 4455555688888855 554455444444432222 1122222 45
Q ss_pred HhcCCeEEeeC--CCCCCCCchHHHHHHHHHhcC----C----CC-----cc-ccCccccccCCCchhHHHhHHHHHhhh
Q 005965 411 WDKDVQVMNEG--PGHIPMHKIPENMQKQLEWCN----E----AP-----FY-TLGPLTTDIAPGYDHITSAIGAANIGA 474 (667)
Q Consensus 411 ~e~gVQVMIEG--PGHVPl~~I~~Nv~lqk~lC~----~----AP-----fY-vLGPLvTDIApGYDHItsAIGaA~aa~ 474 (667)
++.||.-+.=+ ++-=+..+|. -++--+++|. + -| |+ -.|..+.|-+-.|-+ -+++|..|..
T Consensus 241 ~g~gV~~lS~~~~~~~n~~qDiA-k~rA~Rrl~a~~~~e~g~~d~~~~~~fht~~gg~plt~~qa~~n--ia~~A~aAvl 317 (483)
T 1ccw_B 241 AEQGVKNITVGYGECGNMIQDIA-ALRCLEEQTNEYLKAYGYNDVFVTTVFHQWMGGFPQDESKAFGV--IVTATTIAAL 317 (483)
T ss_dssp HHTTCCEEEEEEECCSCHHHHHH-HHHHHHHHHHHHHHHTTCCSCEEEEEEECCCSCCCSSHHHHHHH--HHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCCCHHHHHH-HHHHHHHHHHHHHHHcCCCCceEEEEEeeecCCCCCCHHHHhHH--HHHHHHHHHH
Confidence 67888866554 2222333332 2222222221 1 12 11 145666666777777 6789999999
Q ss_pred cccceeeecCcccccCCCChhHHHHHHHHHHHHHHHhhhhcCCcc----h-hhH-HHHHHHHHhhcCHHHH
Q 005965 475 LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPL----A-QTW-DDALSKARFEFRWMDQ 539 (667)
Q Consensus 475 ~GadfLCYVTPaEHLgLP~~eDVreGVIA~kIAAHaaDlaKg~p~----A-~~r-D~~mS~AR~~~dWe~Q 539 (667)
.||..|=-.|+.|=++||+.+++++++-+ |.++.|.-.|-+- + .++ |.--.+|+.-++--..
T Consensus 318 gGaqslhtkt~dEA~~iPT~ea~~~aLrt---~qqiidpl~Gs~~~~~e~lt~e~~~ie~Ea~~iid~I~~ 385 (483)
T 1ccw_B 318 AGATKVIVKTPHEAIGIPTKEANAAGIKA---TKMALNMLEGQRMPMSKELETEMAVIKAETKCILDKMFE 385 (483)
T ss_dssp HTCSEEECCCTTTTTSSCCHHHHHHHHHH---HHHHHHHTTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEECchhhhccCCCHHHHHHHHHH---HHHHHHhcCCCCCcccHhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876 3445598888433 1 122 6666777776654433
No 68
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=63.81 E-value=18 Score=37.11 Aligned_cols=114 Identities=16% Similarity=0.162 Sum_probs=0.0
Q ss_pred chhhhHHH----HhcCCCCCC-----------CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHH
Q 005965 281 VPIYQALE----KVDGIAENL-----------SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSI 345 (667)
Q Consensus 281 VPIYqAl~----k~~g~~~~l-----------t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi 345 (667)
+|+||-|. ........+ +.+.+.+.+++-.++|.+.+-||.|-
T Consensus 133 ~Pl~~llG~~~~g~~~~~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------------- 190 (392)
T 1tzz_A 133 KPLFRLLAERHGVKANPRVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGG---------------------- 190 (392)
T ss_dssp SBHHHHHHHHTTSCCCCEEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSS----------------------
T ss_pred CcHHHHcCCccCCCcCCCeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----------------------
Q ss_pred HHHHHHHcCCcCchhhhHHHHHHHHhH------hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 346 HAKWCLAYHKENFAYEHWDEILDICNQ------YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 346 ~a~Wml~h~~ENpLYe~FD~ileI~k~------YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
..+++.++++++ .|+.|.+ |+|..-...|.+.+.+..+. +|+. +|
T Consensus 191 ---------------~~~~~~~e~v~avr~a~g~~~~l~v----------Dan~~~~~~~a~~~~~~l~~---~~i~-~i 241 (392)
T 1tzz_A 191 ---------------APIEEDRMRIEAVLEEIGKDAQLAV----------DANGRFNLETGIAYAKMLRD---YPLF-WY 241 (392)
T ss_dssp ---------------SCHHHHHHHHHHHHHHHTTTCEEEE----------ECTTCCCHHHHHHHHHHHTT---SCCS-EE
T ss_pred ---------------CCHHHHHHHHHHHHHhcCCCCeEEE----------ECCCCCCHHHHHHHHHHHHH---cCCC-ee
Q ss_pred eCCCCCCCCchHHHHHHHHHhcCCCCccccCccccc
Q 005965 420 EGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTD 455 (667)
Q Consensus 420 EGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTD 455 (667)
|-| +| ..|+...++++...+. |+.+|
T Consensus 242 EqP--~~----~~d~~~~~~l~~~~~i----PIa~d 267 (392)
T 1tzz_A 242 EEV--GD----PLDYALQAALAEFYPG----PMATG 267 (392)
T ss_dssp ECC--SC----TTCHHHHHHHTTTCCS----CEEEC
T ss_pred cCC--CC----hhhHHHHHHHHhhCCC----CEEEC
No 69
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=63.80 E-value=20 Score=34.93 Aligned_cols=112 Identities=16% Similarity=0.215 Sum_probs=63.9
Q ss_pred HHhCCcEeeecCCCC---ChHHHHHHHHhcCCCCc---ccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC-CCEEEE
Q 005965 247 TMWGADTVMDLSTGR---HIHETREWILRNSAVPV---GTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG-VDYFTI 319 (667)
Q Consensus 247 ~~~GADtVMDLSTGg---di~~~R~~Il~nspvPV---GTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG-VDfmTI 319 (667)
.+.|-.+|.||+... +-..+.+.=++-..+|+ |++|--+.+. .|++.|++..+++ =.-+-|
T Consensus 79 ~~~~i~~VInL~~e~~~y~~~~~~~~gi~y~~~p~~D~~~~P~~~~l~------------~~~~~i~~~~~~~~~~~VlV 146 (241)
T 2c46_A 79 LKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTE------------TFIRLCERFNERNPPELIGV 146 (241)
T ss_dssp HTCEEEEEEECSSCSCSSCTHHHHTTTCEEEECCCCCTTCCCCHHHHH------------HHHHHHTTC-----CEEEEE
T ss_pred hCCCcceeeeccCCCCCCCHHHHHHCCCEEEEEecCCCCCCCChHHHH------------HHHHHHHHHHHhCCCCeEEE
Confidence 345999999998642 33333222222333443 4556444332 2333333322222 135789
Q ss_pred eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHH
Q 005965 320 HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE 399 (667)
Q Consensus 320 HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~E 399 (667)
||- + | +||-|.+++.|++....- .+++.++.+++. ||+.+. ...|+.+
T Consensus 147 HC~---------a----G-~gRTGt~ia~yLm~~~~~-----s~~eAi~~vr~~----------R~~~i~---~~~~l~~ 194 (241)
T 2c46_A 147 HCT---------H----G-FNRTGFLICAFLVEKMDW-----SIEAAVATFAQA----------RPPGIY---KGDYLKE 194 (241)
T ss_dssp ECS---------S----S-SHHHHHHHHHHHHHTTCC-----CHHHHHHHHHHH----------STTCCC---CHHHHHH
T ss_pred ECC---------C----C-CCHHHHHHHHHHHHHhCC-----CHHHHHHHHHHH----------CCCCCC---CHHHHHH
Confidence 993 2 4 599999999998875442 366777777653 888887 4567777
Q ss_pred HHH
Q 005965 400 LLT 402 (667)
Q Consensus 400 L~~ 402 (667)
|..
T Consensus 195 L~~ 197 (241)
T 2c46_A 195 LFR 197 (241)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 70
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=63.31 E-value=24 Score=30.14 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 237 EEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 237 eeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
+++++.| .++|..+|.||............=+ ...|++-.++|.-+ ..+.+++.|.+..++|
T Consensus 25 ~~~~~~L---~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~~~~~~~i~~~~~~~- 88 (150)
T 4erc_A 25 PAHYQFL---LDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPD------------QIDRFVQIVDEANARG- 88 (150)
T ss_dssp HHHHHHH---HHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHH------------HHHHHHHHHHHHHHTT-
T ss_pred HHHHHHH---HHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHH------------HHHHHHHHHHHHHHCC-
Confidence 4555544 4679999999998754321100000 11222222333211 1245566666665555
Q ss_pred CEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcH
Q 005965 315 DYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDT 394 (667)
Q Consensus 315 DfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~ 394 (667)
.-+-|||. .| +||-|.+.+.|++....- .++++++..++. ||+++-..
T Consensus 89 ~~vlVHC~---------~G-----~~Rsg~~~a~~l~~~~~~-----~~~~a~~~vr~~----------R~~~~~~~--- 136 (150)
T 4erc_A 89 EAVGVHCA---------LG-----FGRTGTMLACYLVKERGL-----AAGDAIAEIRRL----------RPGSIETY--- 136 (150)
T ss_dssp CEEEEECS---------SS-----SHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHH----------STTCCCSH---
T ss_pred CCEEEECC---------CC-----CCHHHHHHHHHHHHHcCC-----CHHHHHHHHHHH----------CCCCCCCH---
Confidence 45779994 22 689999999997764322 567788887764 89987644
Q ss_pred HHHHHHHHH
Q 005965 395 AQFAELLTQ 403 (667)
Q Consensus 395 AQ~~EL~~L 403 (667)
.|+.-|...
T Consensus 137 ~q~~~l~~~ 145 (150)
T 4erc_A 137 EQEKAVFQF 145 (150)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 354444433
No 71
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=63.25 E-value=64 Score=31.35 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee---E
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA---L 377 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt---l 377 (667)
.+++.|..-++.|.|++-+...-.... + .. .-.+..++|.+.+++|++. +
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~~~~~~~~-~-----------------~~---------~~~~~~~~l~~~l~~~gL~~~~i 84 (335)
T 2qw5_A 32 IVVAHIKKLQRFGYSGFEFPIAPGLPE-N-----------------YA---------QDLENYTNLRHYLDSEGLENVKI 84 (335)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCCCGG-G-----------------HH---------HHHHHHHHHHHHHHHTTCTTCEE
T ss_pred hHHHHHHHHHHhCCCEEEEecCCCccc-c-----------------cc---------cchHHHHHHHHHHHHCCCCccee
Confidence 455888888999999998876421110 0 00 1136789999999999999 7
Q ss_pred eccCCCCC-CCccCCCcHHHH-HHHHHHHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 378 SIGDGLRP-GSIYDANDTAQF-AELLTQGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 378 SLGDGLRP-G~iaDA~D~AQ~-~EL~~LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
+-.-++-+ ..+.. .|.... ..+..+-+..+.|.+.|+.+++ ||+|.|
T Consensus 85 ~~~~~~~~~~~l~~-~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~~~~ 133 (335)
T 2qw5_A 85 STNVGATRTFDPSS-NYPEQRQEALEYLKSRVDITAALGGEIMM-GPIVIP 133 (335)
T ss_dssp EEECCCCSSSCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCSEEE-ECCSSC
T ss_pred EEEeccCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEe-ccccCc
Confidence 75333322 23332 344333 3456678889999999999994 776544
No 72
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=63.17 E-value=69 Score=33.05 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=42.2
Q ss_pred EeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCChHHHH---HHHHhcC-CCCcccchhhhHHHHhcCCCCCC
Q 005965 223 VNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRHIHETR---EWILRNS-AVPVGTVPIYQALEKVDGIAENL 297 (667)
Q Consensus 223 VNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgdi~~~R---~~Il~ns-pvPVGTVPIYqAl~k~~g~~~~l 297 (667)
+.+|+|... +..++++.+++.|+|.|- +.+-| +-.... +++-+.. .+||.- +.+ .
T Consensus 144 ~~~~i~~~~------~~~~~a~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv-----------~~v--~ 203 (404)
T 1eep_A 144 VGAAVSIDI------DTIERVEELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIA-----------GNI--V 203 (404)
T ss_dssp CEEEECSCT------THHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEE-----------EEE--C
T ss_pred EEEEeCCCh------hHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEE-----------cCC--C
Confidence 567787532 246677888999999874 33433 433333 4555665 455531 111 2
Q ss_pred CHHHHHHHHHHHHhcCCCEEEE
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTI 319 (667)
+.++ .+.-.+.|+|++.+
T Consensus 204 ~~~~----a~~a~~~Gad~I~v 221 (404)
T 1eep_A 204 TKEA----ALDLISVGADCLKV 221 (404)
T ss_dssp SHHH----HHHHHTTTCSEEEE
T ss_pred cHHH----HHHHHhcCCCEEEE
Confidence 3443 33444689999999
No 73
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=62.94 E-value=8.3 Score=38.63 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=65.2
Q ss_pred CceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCCCCChHHHHHHHHhcCCCCcccchhhhHH
Q 005965 211 EPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLSTGRHIHETREWILRNSAVPVGTVPIYQAL 287 (667)
Q Consensus 211 ~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl 287 (667)
+-+-||+| ..||-+.|=- .+ .+|+.++..+...|||.| .|+....++..+-+.|++.. +.+||-=.+
T Consensus 26 ~~~~~g~g-~pkIcvpl~~----~t-~~e~~~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~~----~~~PiI~T~ 95 (259)
T 3l9c_A 26 GGQQMGRG-SMKIVVPVMP----QN-IEEANQLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKF----SGHEVIFTL 95 (259)
T ss_dssp ---------CCEEEEEECC----SS-HHHHHHCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHHT----TTSEEEEEC
T ss_pred CCcEECCC-CcEEEEEecC----CC-HHHHHHHHHhhccCCCEEEEEeccccchhHHHHHHHHHHhc----CCCcEEEEE
Confidence 34557776 6677776621 22 345555455556799998 68888778888777777653 244544333
Q ss_pred HHh--cCCCCCCCHHHHHHHHHHHHh-cCCCEEEEeccccccccc
Q 005965 288 EKV--DGIAENLSWEVFRDTLIEQAE-QGVDYFTIHAGVLLRYIP 329 (667)
Q Consensus 288 ~k~--~g~~~~lt~e~~~d~ieeQAe-qGVDfmTIHaGv~~~~l~ 329 (667)
... ||. -.++.+.+++.+++-++ .||||+.|=--...+.+.
T Consensus 96 Rt~~EGG~-~~~~~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~ 139 (259)
T 3l9c_A 96 RTEKEGGN-ISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLE 139 (259)
T ss_dssp CBGGGTCS-BCCCHHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGG
T ss_pred eehhhCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEECcCCHHHHH
Confidence 222 444 57899999998888777 799999987544333333
No 74
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=62.67 E-value=20 Score=36.48 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
-+.|.|.+..++-.++|.+.+-||.|-
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~ 170 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGG 170 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCS
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCC
Confidence 477999999999899999999999763
No 75
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=62.64 E-value=13 Score=37.21 Aligned_cols=97 Identities=19% Similarity=0.177 Sum_probs=65.9
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHHHHhcCCCCcc-cch-hhhHHHHhc
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREWILRNSAVPVG-TVP-IYQALEKVD 291 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~Il~nspvPVG-TVP-IYqAl~k~~ 291 (667)
-.|||-+-||-.......+.-+...++|++.|||-| +++.- .||.+.+++.|-.-...-=| .|+ ||+.
T Consensus 77 s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt----- 151 (239)
T 3ngj_A 77 TGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIEC----- 151 (239)
T ss_dssp SSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCG-----
T ss_pred CCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEec-----
Confidence 347888888777667777888889999999999875 45432 26777777766432211001 122 4443
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 292 GIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 292 g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
-.||.|++....+--.+.|+||+=.=.|.
T Consensus 152 ---~~Lt~eei~~a~~ia~~aGADfVKTSTGf 180 (239)
T 3ngj_A 152 ---CYLTNEEKVEVCKRCVAAGAEYVKTSTGF 180 (239)
T ss_dssp ---GGSCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred ---CCCCHHHHHHHHHHHHHHCcCEEECCCCC
Confidence 24799988888888889999999766553
No 76
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=62.52 E-value=39 Score=31.34 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCCChHH-----HHHHHH----h--cCCCCcccchhhhHHHHhcCCCCCCCHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGRHIHE-----TREWIL----R--NSAVPVGTVPIYQALEKVDGIAENLSWEVFR 303 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGgdi~~-----~R~~Il----~--nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~ 303 (667)
+.+..++.|+ ++|..+|.||.+-..+.. ..+.+. + ..|++-..+|--+ ....++
T Consensus 59 ~~~~d~~~L~---~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~~p~~~------------~~~~~~ 123 (212)
T 1fpz_A 59 NVQKDTEELK---SCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIA------------SCCEIM 123 (212)
T ss_dssp CHHHHHHHHH---HHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHH------------HHHHHH
T ss_pred hHHHHHHHHH---HCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCCCCCCHH------------HHHHHH
Confidence 5677777664 589999999987532221 111111 1 1122222222111 134566
Q ss_pred HHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHH-cCCcCchhhhHHHHHHHHhHhceeEeccCC
Q 005965 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLA-YHKENFAYEHWDEILDICNQYDVALSIGDG 382 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~-h~~ENpLYe~FD~ileI~k~YDVtlSLGDG 382 (667)
+.|.+....|-- +-|||. .| ++|-|.+.+.|++. +..- .++++++.+++.
T Consensus 124 ~~i~~~~~~~~~-VlVHC~-------------aG-~gRTg~~~a~~L~~~~~g~-----~~~~a~~~vr~~--------- 174 (212)
T 1fpz_A 124 EELTTCLKNYRK-TLIHSY-------------GG-LGRSCLVAACLLLYLSDTI-----SPEQAIDSLRDL--------- 174 (212)
T ss_dssp HHHHHHHHTTCC-EEEECS-------------SS-SSHHHHHHHHHHHHHCSSC-----CHHHHHHHHHHH---------
T ss_pred HHHHHHHhCCCC-EEEECC-------------CC-CCHHHHHHHHHHHHhccCC-----CHHHHHHHHHHh---------
Confidence 666665554433 569994 24 48999999999887 3332 356777777765
Q ss_pred CC-CCCccCCCcHHHHHHHHHHHHHH
Q 005965 383 LR-PGSIYDANDTAQFAELLTQGELT 407 (667)
Q Consensus 383 LR-PG~iaDA~D~AQ~~EL~~LGEL~ 407 (667)
| ||++-. ..|+.=|..+.++.
T Consensus 175 -R~~~~~~~---~~Q~~~l~~~~~~l 196 (212)
T 1fpz_A 175 -RGSGAIQT---IKQYNYLHEFRDKL 196 (212)
T ss_dssp -HCTTSSCS---HHHHHHHTTHHHHH
T ss_pred -CCCCCCCC---HHHHHHHHHHHHHH
Confidence 8 788763 55665555544443
No 77
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=61.28 E-value=18 Score=36.67 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.+++.+..++-.++|.+.+-||.|
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g 170 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS 170 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHhChheEEeecC
Confidence 7899999999999999999999987
No 78
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=61.21 E-value=13 Score=38.60 Aligned_cols=81 Identities=20% Similarity=0.295 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCcEeeecCC---CCChHHHHHHHHhcCCCCc--c--------cchhhhHHHHhcCCCCCCCHHHHHHH
Q 005965 239 EVYKVQWATMWGADTVMDLST---GRHIHETREWILRNSAVPV--G--------TVPIYQALEKVDGIAENLSWEVFRDT 305 (667)
Q Consensus 239 EveKl~~A~~~GADtVMDLST---Ggdi~~~R~~Il~nspvPV--G--------TVPIYqAl~k~~g~~~~lt~e~~~d~ 305 (667)
-++.++..-++|..||.|.++ |.|+..+++ |-+.+.|.| | +.|.|-.... +..++.|+|-+.
T Consensus 85 ~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~-is~~tGv~IV~~TG~y~~~~~~p~~~~~~~----~~~~~~e~l~~~ 159 (360)
T 3tn4_A 85 AVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRR-VAEETGLNIICATGYYYEGEGAPPYFQFRR----LLGTAEDDIYDM 159 (360)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHH-HHHHHCCEEEEEECCCCGGGSCTHHHHHHH----HHTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHH-HHHHcCCCEEEeCccccCcccCCcccchhh----hcccCHHHHHHH
Confidence 456677778899999999886 678988875 667777765 1 1233322222 356788999999
Q ss_pred HHHHHhcCCCEEEEecccc
Q 005965 306 LIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 306 ieeQAeqGVDfmTIHaGv~ 324 (667)
+.+..++|+|--.|-||+-
T Consensus 160 ~i~Ei~~Gi~~tgikaG~I 178 (360)
T 3tn4_A 160 FMAELTEGIADTGIKAGVI 178 (360)
T ss_dssp HHHHHHTCSTTSCCCCSEE
T ss_pred HHHHHHhccccCCCcceEE
Confidence 9999999998666666653
No 79
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=61.11 E-value=10 Score=37.38 Aligned_cols=94 Identities=18% Similarity=0.072 Sum_probs=67.8
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecC--CCCChHHHHHHHHhcCCCC-cccch-hhhHHHHhcCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLS--TGRHIHETREWILRNSAVP-VGTVP-IYQALEKVDGI 293 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLS--TGgdi~~~R~~Il~nspvP-VGTVP-IYqAl~k~~g~ 293 (667)
+||.+-||=.......+.-+.-.+. ++.|||-| +++. -.+|.+.+++.|-+-...- =..+| |.+
T Consensus 51 v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlE-------- 121 (226)
T 1vcv_A 51 VKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITE-------- 121 (226)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECC--------
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEe--------
Confidence 8998888886667788877777888 99999988 6665 1458888888776533211 01344 333
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 294 AENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 294 ~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
...||.|.+....+--++.|.||+=-=.|.
T Consensus 122 t~~Lt~eei~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 122 EPYLRDEERYTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp GGGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 245688999999999999999999665443
No 80
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=60.86 E-value=33 Score=31.69 Aligned_cols=63 Identities=14% Similarity=0.016 Sum_probs=41.2
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
...+++.+.+++|++.++.--. .+.+. +.|....+ -+..+-+..+.|.+.|+.+++=.||..|
T Consensus 45 ~~~~~~~~~l~~~gl~~~~~~~--~~~~~-~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~ 108 (275)
T 3qc0_A 45 IGLGEAGRIVRANGLKLTGLCR--GGFFP-APDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLP 108 (275)
T ss_dssp HCHHHHHHHHHHHTCEESCEEE--EECCC-CSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCC
T ss_pred cCHHHHHHHHHHcCCceEEeec--CCCcC-CCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCC
Confidence 4578889999999988763221 01122 23443333 3455677888888899988888888776
No 81
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=60.77 E-value=1.5e+02 Score=31.32 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA 376 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt 376 (667)
++++++.+.++.-.+.|+.+..||+=+--..... ..|.. ..+.|.+++++++++.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~l~l~Glh~H~gs~~~~~----------------~~~~~-------a~~~~~~~~~~~~~~G~~ 238 (471)
T 2oo0_A 182 ATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP----------------ETFVQ-------AISDARCVFDMGAEVGFS 238 (471)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEECCCBSCCCT----------------HHHHH-------HHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEEeCCCCCCCH----------------HHHHH-------HHHHHHHHHHHHHHcCCC
Confidence 5677777776655556999988887543221110 01111 145578889999998764
Q ss_pred ---EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHH--hcCCeEEeeCCCC
Q 005965 377 ---LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAW--DKDVQVMNEGPGH 424 (667)
Q Consensus 377 ---lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~--e~gVQVMIEGPGH 424 (667)
|.+|-|+ |+.-.+..|...+.+.+.-+ .+... ..++++++| ||-
T Consensus 239 ~~~ldiGGG~-~~~~~~~~~~~~~~~~i~~~--l~~~~p~~~~~~li~E-pGR 287 (471)
T 2oo0_A 239 MYLLDIGGGF-PGSEDVKLKFEEITGVINPA--LDKYFPSDSGVRIIAE-PGR 287 (471)
T ss_dssp CCEEECCCCC-CSSSSSSSCHHHHHHHHHHH--HHHHSCGGGTCEEEEC-CSH
T ss_pred CCEEEECCCc-CCCCCCCCCHHHHHHHHHHH--HHHHhcccCCcEEEec-Ccc
Confidence 7899999 44212223444444433221 11111 246888888 663
No 82
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=60.66 E-value=9.4 Score=37.06 Aligned_cols=85 Identities=20% Similarity=0.160 Sum_probs=48.2
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcE----eeecCCCCCh---HHHHHHHHhc--CCCCcccchhhhHHHH
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADT----VMDLSTGRHI---HETREWILRN--SAVPVGTVPIYQALEK 289 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADt----VMDLSTGgdi---~~~R~~Il~n--spvPVGTVPIYqAl~k 289 (667)
.++||..+| -|.+..++++|++.+. ++|+|. |||-..-.|| ..+-+.|-+. +.+|+.-
T Consensus 3 ~~~~i~psi-l~~D~~~l~~~i~~l~---~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dv--------- 69 (228)
T 3ovp_A 3 SGCKIGPSI-LNSDLANLGAECLRML---DSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDM--------- 69 (228)
T ss_dssp -CCEEEEBC-TTSCGGGHHHHHHHHH---HTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEE---------
T ss_pred CCcEeeeeh-eeCCchhHHHHHHHHH---HcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEE---------
Confidence 346777777 5778888999998875 679984 6874321122 1222333223 3444421
Q ss_pred hcCCCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 290 VDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 290 ~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+=-+ .+++.+ ++.-++.|+|++|+|+-
T Consensus 70 -hLmv--~~p~~~---i~~~~~aGad~itvH~E 96 (228)
T 3ovp_A 70 -HMMV--SKPEQW---VKPMAVAGANQYTFHLE 96 (228)
T ss_dssp -EEEC--SCGGGG---HHHHHHHTCSEEEEEGG
T ss_pred -EEEe--CCHHHH---HHHHHHcCCCEEEEccC
Confidence 0001 122333 44556789999999974
No 83
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=60.48 E-value=1.6e+02 Score=30.33 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=41.7
Q ss_pred EeeccccCCCCCChHHHHHHHHHHHHh--CCcEe-eecCCCCC--hHHHHHHHHhcC-CCCcccchhhhHHHHhcCCCCC
Q 005965 223 VNANIGNSAVASSIEEEVYKVQWATMW--GADTV-MDLSTGRH--IHETREWILRNS-AVPVGTVPIYQALEKVDGIAEN 296 (667)
Q Consensus 223 VNANIGtS~~~~~ieeEveKl~~A~~~--GADtV-MDLSTGgd--i~~~R~~Il~ns-pvPVGTVPIYqAl~k~~g~~~~ 296 (667)
+-+++|.+ .++.++++..++. |+|.| +|++.|.. +-+.=+||-+.. .+||+ ++ .+
T Consensus 109 v~~~~g~~------~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi----------~g-~v-- 169 (351)
T 2c6q_A 109 LAASSGTG------SSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIM----------AG-NV-- 169 (351)
T ss_dssp EEEEECSS------HHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEE----------EE-EE--
T ss_pred eEeecCCC------hHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEE----------EE-eC--
Confidence 44455554 2356788888887 99976 67765522 122334555555 45543 11 11
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEE
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
+|.++ .++-.+.|||++.+
T Consensus 170 ~t~e~----A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 170 VTGEM----VEELILSGADIIKV 188 (351)
T ss_dssp CSHHH----HHHHHHTTCSEEEE
T ss_pred CCHHH----HHHHHHhCCCEEEE
Confidence 24443 34456789999966
No 84
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=60.34 E-value=14 Score=38.05 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=64.5
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHHHHh---cCCCCcccch-hhhHHHHh
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREWILR---NSAVPVGTVP-IYQALEKV 290 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~Il~---nspvPVGTVP-IYqAl~k~ 290 (667)
.|||-+-||=..-....+.-+.-.++|++.|||-| +++.- .+|.+.+++.|-+ .+.-|+ +. ||+.
T Consensus 109 ~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~--lKVIlEt---- 182 (288)
T 3oa3_A 109 QVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAI--LKVILET---- 182 (288)
T ss_dssp SCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSE--EEEECCG----
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCC--ceEEEEC----
Confidence 47777778866666777888889999999999876 45533 3577888777643 232221 11 2222
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
-.||.|++....+--++.|.||+--=.|
T Consensus 183 ----~~Lt~eei~~A~~ia~eaGADfVKTSTG 210 (288)
T 3oa3_A 183 ----SQLTADEIIAGCVLSSLAGADYVKTSTG 210 (288)
T ss_dssp ----GGCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEcCCC
Confidence 2478899988888889999999854444
No 85
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=60.00 E-value=11 Score=39.15 Aligned_cols=59 Identities=34% Similarity=0.444 Sum_probs=38.9
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
++.|+++|||.|| |-+. ++..+|+.+=..- +.|+|- +-|. +| .++|.+-++.||||+.+
T Consensus 244 a~eAl~aGaD~I~-LDn~-~~~~l~~av~~l~----~~v~ie-----aSGG---It----~~~I~~~a~tGVD~isv 302 (320)
T 3paj_A 244 LEEAISAGADIIM-LDNF-SLEMMREAVKINA----GRAALE-----NSGN---IT----LDNLKECAETGVDYISV 302 (320)
T ss_dssp HHHHHHTTCSEEE-EESC-CHHHHHHHHHHHT----TSSEEE-----EESS---CC----HHHHHHHHTTTCSEEEC
T ss_pred HHHHHHcCCCEEE-ECCC-CHHHHHHHHHHhC----CCCeEE-----EECC---CC----HHHHHHHHHcCCCEEEE
Confidence 4567889999999 5554 7788877663211 344442 2233 33 46778888999999976
No 86
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=59.73 E-value=1.2e+02 Score=28.68 Aligned_cols=123 Identities=14% Similarity=0.044 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA 376 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt 376 (667)
++.+.+.+.-+.-.+.|+.+..+|......+ ++.|.....-. -..+.|.+.+++|++.++.
T Consensus 63 ~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~---------~l~~~d~~~r~----------~~~~~~~~~i~~A~~lG~~ 123 (295)
T 3cqj_A 63 WSREQRLALVNAIVETGVRVPSMCLSAHRRF---------PLGSEDDAVRA----------QGLEIMRKAIQFAQDVGIR 123 (295)
T ss_dssp CCHHHHHHHHHHHHHHCCEEEEEEEGGGGTS---------CTTCSSHHHHH----------HHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEecCcccCC---------CCCCCCHHHHH----------HHHHHHHHHHHHHHHcCCC
Confidence 3445544444455567999998886432111 12222111111 1357899999999998865
Q ss_pred EeccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHh
Q 005965 377 LSIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEW 440 (667)
Q Consensus 377 lSLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~l 440 (667)
.=.--|..+. .+...+.++..+ ..|.+|.+.|.++||.+.+|--..-.++.+++-.++-+++
T Consensus 124 ~v~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l~~~v 186 (295)
T 3cqj_A 124 VIQLAGYDVY--YQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYL 186 (295)
T ss_dssp EEEECCCSCS--SSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHHHH
T ss_pred EEEECCCCCC--cCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHHHHHHhc
Confidence 4221122110 122233344443 4678999999999999999985443456666666665554
No 87
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=59.55 E-value=1.5e+02 Score=30.25 Aligned_cols=181 Identities=12% Similarity=0.048 Sum_probs=106.0
Q ss_pred HHHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHH
Q 005965 165 YYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244 (667)
Q Consensus 165 ~~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~ 244 (667)
..|+.|+-.--..-.|+..|++.-.+. -|. .-++.+++.+|-+- ..++++=++.++
T Consensus 116 ~~A~~aid~AlwDl~gk~~g~Pl~~ll----Gg~-------------------~~~vp~y~~~g~~~-~~~~e~~~~~a~ 171 (393)
T 2og9_A 116 TQAIGAFDVALWDLKAKRAGLSLAKLL----GSY-------------------RDSVRCYNTSGGFL-HTPIDQLMVNAS 171 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBHHHHH----CCS-------------------CSEEEEEBCTTCCT-TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHh----CCC-------------------CCceEEEEECCCcC-CCCHHHHHHHHH
Confidence 356666655555566777777664443 221 12345555554221 136777788889
Q ss_pred HHHHhCCcEeeecCCCC-ChHHHHHHH---Hhc--CCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEE
Q 005965 245 WATMWGADTVMDLSTGR-HIHETREWI---LRN--SAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFT 318 (667)
Q Consensus 245 ~A~~~GADtVMDLSTGg-di~~~R~~I---l~n--spvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmT 318 (667)
.+.+.|-|+|= +-.|. ++....+.| -+. ..+++. | .++ ..+|.++..+.+++-.+.||+|+-
T Consensus 172 ~~~~~Gf~~vK-ik~g~~~~~~~~e~v~avR~avg~d~~l~-v-------Dan---~~~~~~~a~~~~~~l~~~~i~~iE 239 (393)
T 2og9_A 172 ASIERGIGGIK-LKVGQPDGALDIARVTAVRKHLGDAVPLM-V-------DAN---QQWDRPTAQRMCRIFEPFNLVWIE 239 (393)
T ss_dssp HHHHTTCCCEE-EECCCSCHHHHHHHHHHHHHHHCTTSCEE-E-------ECT---TCCCHHHHHHHHHHHGGGCCSCEE
T ss_pred HHHHcCCCEEE-EecCCCCHHHHHHHHHHHHHHcCCCCEEE-E-------ECC---CCCCHHHHHHHHHHHHhhCCCEEE
Confidence 99999998874 54553 433222211 111 112221 0 223 346788888888777777999862
Q ss_pred EeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCC---------Cc
Q 005965 319 IHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPG---------SI 388 (667)
Q Consensus 319 IHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG---------~i 388 (667)
-|+ ..+++.+-++.++.++-+.++..+.-- ..
T Consensus 240 --------------------------------------~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 281 (393)
T 2og9_A 240 --------------------------------------EPLDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRA 281 (393)
T ss_dssp --------------------------------------CCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred --------------------------------------CCCCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCC
Confidence 121 135777888888888988888776510 00
Q ss_pred cC--CCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 389 YD--ANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 389 aD--A~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
+| .-|..++.-|-..-++++.|.++|++||+
T Consensus 282 ~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~ 314 (393)
T 2og9_A 282 ADYLMPDAPRVGGITPFLKIASLAEHAGLMLAP 314 (393)
T ss_dssp CSEECCCHHHHTSHHHHHHHHHHHHHTTCEECC
T ss_pred CCEEeeCccccCCHHHHHHHHHHHHHcCCEEec
Confidence 11 12344444455556788889999999995
No 88
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=59.29 E-value=6.7 Score=39.52 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=65.8
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecC--CCCChHHHHHHHHhcCCCCcc-cch---hhhHHHHh
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLS--TGRHIHETREWILRNSAVPVG-TVP---IYQALEKV 290 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLS--TGgdi~~~R~~Il~nspvPVG-TVP---IYqAl~k~ 290 (667)
.|||.+-||=..-....+.-+.-.+.|++.|||-| +++. -.+|.+.+++.|-+-...--+ -+| |.+.
T Consensus 68 ~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt---- 143 (260)
T 1p1x_A 68 EIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIET---- 143 (260)
T ss_dssp TSEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCH----
T ss_pred CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEec----
Confidence 68898888887777788888888999999999987 6665 145788888877543321110 123 2332
Q ss_pred cCCCCCCCHHH-HHHHHHHHHhcCCCEEEEeccc
Q 005965 291 DGIAENLSWEV-FRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 291 ~g~~~~lt~e~-~~d~ieeQAeqGVDfmTIHaGv 323 (667)
..|+.++ +....+--++.|.||+=-=.|.
T Consensus 144 ----~~L~d~e~i~~a~~ia~eaGADfVKTSTGf 173 (260)
T 1p1x_A 144 ----GELKDEALIRKASEISIKAGADFIKTSTGK 173 (260)
T ss_dssp ----HHHCSHHHHHHHHHHHHHTTCSEEECCCSC
T ss_pred ----ccCCcHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 1235455 6788888889999999665443
No 89
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=59.07 E-value=55 Score=33.85 Aligned_cols=80 Identities=15% Similarity=0.302 Sum_probs=50.9
Q ss_pred CCChHHHHHHHHHHHHhCCcEeeecC----CCCChHHHHHHHHhcCCCCc-ccchhhhHHHHhcCCCCCCCHHHHHHHHH
Q 005965 233 ASSIEEEVYKVQWATMWGADTVMDLS----TGRHIHETREWILRNSAVPV-GTVPIYQALEKVDGIAENLSWEVFRDTLI 307 (667)
Q Consensus 233 ~~~ieeEveKl~~A~~~GADtVMDLS----TGgdi~~~R~~Il~nspvPV-GTVPIYqAl~k~~g~~~~lt~e~~~d~ie 307 (667)
..++++=+++|..+.++|..||+|++ .|.|+..+++.. +.++|.| -++=+|+.--- -..+.. +.++|.+.++
T Consensus 71 l~~~~~~~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la-~~~gi~i~~~tG~y~~~~~-P~~~~~-~~~~L~~~~~ 147 (365)
T 3rhg_A 71 KKPIEDVIFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVA-ELTGINVVASSGLYIEKFE-GKRLAD-DIDAMAKMID 147 (365)
T ss_dssp CCCHHHHHHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHH-HHHCCEEECEECCCCHHHH-GGGGGS-CHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHH-HHHCCcEEEEeCccCCCCC-chhhcC-CHHHHHHHHH
Confidence 35778888999999999999999999 577888776644 4555421 11212321000 001122 6677777787
Q ss_pred HHHhcCCC
Q 005965 308 EQAEQGVD 315 (667)
Q Consensus 308 eQAeqGVD 315 (667)
+..+.|++
T Consensus 148 ~ei~~gi~ 155 (365)
T 3rhg_A 148 DELNIGID 155 (365)
T ss_dssp HHHHTCST
T ss_pred HHHHhccc
Confidence 77777775
No 90
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=58.70 E-value=58 Score=30.55 Aligned_cols=78 Identities=12% Similarity=-0.042 Sum_probs=52.3
Q ss_pred hhhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCCC-----CCCCchH
Q 005965 359 AYEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEGPGH-----IPMHKIP 431 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPGH-----VPl~~I~ 431 (667)
..++|.+.+++|++.++. +.+.-| .|. +...+.+++.+ ..|.+|++.|.++||.+.+|--.| -.++..+
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g-~~~---~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~~~ 166 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG-ITE---GLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVHQL 166 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC-BCT---TSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCCHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC-CCC---CCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcCHH
Confidence 467899999999999874 444333 332 22334455544 358899999999999999995222 2356666
Q ss_pred HHHHHHHHh
Q 005965 432 ENMQKQLEW 440 (667)
Q Consensus 432 ~Nv~lqk~l 440 (667)
+-.++-+++
T Consensus 167 ~~~~l~~~v 175 (269)
T 3ngf_A 167 EAVGLVKRV 175 (269)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666664
No 91
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=58.69 E-value=81 Score=28.71 Aligned_cols=120 Identities=13% Similarity=0.154 Sum_probs=69.0
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecCCCCC-hHHHHHHHHhcCCCC--cccchhhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLSTGRH-IHETREWILRNSAVP--VGTVPIYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLSTGgd-i~~~R~~Il~nspvP--VGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
.+++..++.++ +.|..+|.+|..... -......=+.-..+| -+..|.-+.+ +.|++.|.+..
T Consensus 48 ~t~~~~~~~L~---~~gi~~Iv~l~~~~~~~~~~~~~~i~~~~~pi~d~~~~~~~~~------------~~~~~~i~~~~ 112 (189)
T 3rz2_A 48 ATLNKFIEELK---KYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIV------------DDWLSLVKIKF 112 (189)
T ss_dssp TTHHHHHHHHH---TTTEEEEEECSCCCSCCHHHHHSSCEEEECCCCSSSCCCSHHH------------HHHHHHHHHHH
T ss_pred ccHHHHHHHHH---HcCCcEEEEeCCCcCCHHHHHHcCcEEEEecCCCCCCCCHHHH------------HHHHHHHHHHH
Confidence 56666665553 789999999987532 111111111111222 2223322221 34555555542
Q ss_pred -hcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCcc
Q 005965 311 -EQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIY 389 (667)
Q Consensus 311 -eqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~ia 389 (667)
++.=.-+-|||- .| +||-|.+++.|++..+- .++++++..++ .|||++-
T Consensus 113 ~~~~~~~VlVHC~---------aG-----~gRSg~~va~~L~~~g~------~~~~a~~~vr~----------~R~~~v~ 162 (189)
T 3rz2_A 113 REEPGCCIAVHCV---------AG-----LGRAPVLVALALIEGGM------KYEDAVQFIRQ----------KRRGAFN 162 (189)
T ss_dssp HHSTTCEEEEECS---------SS-----STTHHHHHHHHHHTTTC------CHHHHHHHHHT----------TSSSCCC
T ss_pred HhCCCCcEEEECC---------CC-----CCHHHHHHHHHHHHcCC------CHHHHHHHHHH----------HCcCCCC
Confidence 122236789993 22 68999999999985321 46788888876 4899882
Q ss_pred CCCcHHHHHHHHH
Q 005965 390 DANDTAQFAELLT 402 (667)
Q Consensus 390 DA~D~AQ~~EL~~ 402 (667)
..|+.-|..
T Consensus 163 ----~~Q~~~l~~ 171 (189)
T 3rz2_A 163 ----SKQLLYLEK 171 (189)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHHH
Confidence 367766643
No 92
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=58.61 E-value=23 Score=34.80 Aligned_cols=79 Identities=13% Similarity=0.073 Sum_probs=48.6
Q ss_pred CChHHHHHHHHHHHHhCCcEeeec--CC---------CCChHHH---HHHHHhcCCCCcccchhhhHHHHhcCCCCCCCH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDL--ST---------GRHIHET---REWILRNSAVPVGTVPIYQALEKVDGIAENLSW 299 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDL--ST---------Ggdi~~~---R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~ 299 (667)
.++++=.+-++.+.++|+|..++| |. |+|.+.+ =++|-+.+.+||. .|.. .+++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~--------vKi~---~~~~~ 171 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLG--------VKLP---PYFDL 171 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEE--------EEEC---CCCSH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEE--------EEEC---CCCCH
Confidence 356666777788889999943444 31 3355543 3333334444432 1221 23577
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccc
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
+++.+..+.-.+.|||++++|...
T Consensus 172 ~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 172 VHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp HHHHHHHHHHTTSCCCEEEECCCE
T ss_pred HHHHHHHHHHHHcCCcEEEecCCC
Confidence 777777777778899999999764
No 93
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=58.51 E-value=35 Score=28.96 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHHhCCcEeeecCCCCChHH--HHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 236 IEEEVYKVQWATMWGADTVMDLSTGRHIHE--TREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 236 ieeEveKl~~A~~~GADtVMDLSTGgdi~~--~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
.+..++.+ .+.|..+|.||......+. ....-....|++-+.+|-.+ ..+.+++.|++..++|
T Consensus 25 ~~~~~~~l---~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~------------~~~~~~~~i~~~~~~~ 89 (151)
T 2img_A 25 LPAHYQFL---LDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPD------------QIDRFVQIVDEANARG 89 (151)
T ss_dssp SHHHHHHH---HHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHH------------HHHHHHHHHHHHHHTT
T ss_pred cHHHHHHH---HHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHH------------HHHHHHHHHHHHHhCC
Confidence 34455444 3589999999988744221 00000111222222222111 1235666666655554
Q ss_pred CCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCC
Q 005965 314 VDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDA 391 (667)
Q Consensus 314 VDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA 391 (667)
.-+-|||. +| +||-|.+.+.|++....- .++++++..++. ||+.+-..
T Consensus 90 -~~vlVHC~---------aG-----~~Rsg~~~~~~l~~~~~~-----~~~~a~~~~r~~----------R~~~~~~~ 137 (151)
T 2img_A 90 -EAVGVHCA---------LG-----FGRTGTMLACYLVKERGL-----AAGDAIAEIRRL----------RPGSIETY 137 (151)
T ss_dssp -CEEEEECS---------SS-----SSHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH----------STTCSCSH
T ss_pred -CcEEEECC---------CC-----CChHHHHHHHHHHHHhCc-----CHHHHHHHHHHH----------CCCCCCCH
Confidence 35779994 22 589999999998776222 567778877774 99988543
No 94
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=58.50 E-value=28 Score=35.21 Aligned_cols=131 Identities=17% Similarity=0.064 Sum_probs=78.3
Q ss_pred HHHHHHHhHhceeEecc--CCCCCCCccCC-Cc-HHHHHH-HHHHHHHHHHHHhcCCe--EEeeCCCCCCCCchHHHHHH
Q 005965 364 DEILDICNQYDVALSIG--DGLRPGSIYDA-ND-TAQFAE-LLTQGELTRRAWDKDVQ--VMNEGPGHIPMHKIPENMQK 436 (667)
Q Consensus 364 D~ileI~k~YDVtlSLG--DGLRPG~iaDA-~D-~AQ~~E-L~~LGEL~krA~e~gVQ--VMIEGPGHVPl~~I~~Nv~l 436 (667)
+++++++++|++.+-|= .|. |....+. .+ ..-+.| +..|.+++++|.++||. =+|==||.-.-...+.|+++
T Consensus 114 ~~m~~~~a~~~~~vVlmh~~G~-p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~l 192 (280)
T 1eye_A 114 PAMGPLLAEADVPWVLMHWRAV-SADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAI 192 (280)
T ss_dssp TTHHHHHHHHTCCEEEECCCCS-CTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEEcCCCC-CcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHH
Confidence 47899999999877653 221 4433222 11 113445 77888999999999997 34445777677888899888
Q ss_pred HHHhc----CCCCccccCc--------ccc-cc---CCCch-hHHHhHHHHHhhhcccceeeecCcccccCCCChhHHHH
Q 005965 437 QLEWC----NEAPFYTLGP--------LTT-DI---APGYD-HITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKA 499 (667)
Q Consensus 437 qk~lC----~~APfYvLGP--------LvT-DI---ApGYD-HItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDVre 499 (667)
-+.+- -+.|..+ |+ |.. |. -|--| ...++.-.+++...|++++ .+-||++
T Consensus 193 l~~l~~~~~~g~Pvl~-G~Srksfi~~~~~~~~g~~~~~~~R~~~t~a~~~~a~~~Ga~Iv------------rvhdV~~ 259 (280)
T 1eye_A 193 LHALPELVATGIPVLV-GASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGV------------RVHDVRA 259 (280)
T ss_dssp HHTHHHHHTTSSCBEE-CCTTCHHHHHHTCCSSSCCCCGGGGHHHHHHHHHHHHHTTCSEE------------EESCHHH
T ss_pred HHHHHHhhcCCCCEEE-EecchHHHHhhhccccCCCCCcccchHHHHHHHHHHHHcCCCEE------------EeCCHHH
Confidence 76653 3455432 43 110 00 12112 2234444678888898776 3456666
Q ss_pred HHHHHHHHH
Q 005965 500 GVIAYKIAA 508 (667)
Q Consensus 500 GVIA~kIAA 508 (667)
=+-|-+++.
T Consensus 260 ~~~a~~~~~ 268 (280)
T 1eye_A 260 SVDAIKVVE 268 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655555543
No 95
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=58.29 E-value=78 Score=32.67 Aligned_cols=79 Identities=22% Similarity=0.270 Sum_probs=47.3
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecCC---CCChHHHHHHHHhcCCCCc-ccchhhhHHHHhc-CCCCCCCHHHHHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLST---GRHIHETREWILRNSAVPV-GTVPIYQALEKVD-GIAENLSWEVFRDTLIE 308 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLST---Ggdi~~~R~~Il~nspvPV-GTVPIYqAl~k~~-g~~~~lt~e~~~d~iee 308 (667)
.+++.=++.++.+.++|..||.|.+| |.|+..+++.. +.+++.| -++=+|.. ... -.+...+.++|.+.+.+
T Consensus 83 ~~~~~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la-~~~gv~i~~~tG~y~~--~~~P~~~~~~~~~~L~~~~~~ 159 (364)
T 3k2g_A 83 DDLDLAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRIS-AETGVQVVMGAGYYLA--SSMPETAARLSADDIADEIVA 159 (364)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHH-HHHCCEEEECCSBCCG--GGCCGGGGTCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHH-HHhCCcEEEEeCccCC--CCCchhhccCCHHHHHHHHHH
Confidence 46788889999999999999999987 67877665544 3444321 11111210 000 01123355667777777
Q ss_pred HHhcCCC
Q 005965 309 QAEQGVD 315 (667)
Q Consensus 309 QAeqGVD 315 (667)
..++|++
T Consensus 160 ei~~Gi~ 166 (364)
T 3k2g_A 160 EALEGTD 166 (364)
T ss_dssp HHHTCBT
T ss_pred HHHhccc
Confidence 6677765
No 96
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=57.39 E-value=14 Score=36.73 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=49.4
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcE----eeecCCCCCh---HHHHHHHHhcC-CCCcccchhhhHHHHhcC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADT----VMDLSTGRHI---HETREWILRNS-AVPVGTVPIYQALEKVDG 292 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADt----VMDLSTGgdi---~~~R~~Il~ns-pvPVGTVPIYqAl~k~~g 292 (667)
.||..+| -|.+..++++|++.+. ++|||. |||-..-.|| ..+-+.|-+.+ .+|+.. +=
T Consensus 28 ~~i~pSi-lsaD~~~L~~~i~~l~---~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldv----------HL 93 (246)
T 3inp_A 28 IQINPSI-LSADLARLGDDVKAVL---AAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDV----------HL 93 (246)
T ss_dssp CEEEEBG-GGSCGGGHHHHHHHHH---HTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEE----------EE
T ss_pred Ceeehhh-hcCChhhHHHHHHHHH---HcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEE----------EE
Confidence 4677777 4677788899998775 579984 6884322222 13334443444 343321 00
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+. +++. .++.-++.|.|++|+|+--+
T Consensus 94 mv~--~p~~---~i~~~~~aGAd~itvH~Ea~ 120 (246)
T 3inp_A 94 MVK--PVDA---LIESFAKAGATSIVFHPEAS 120 (246)
T ss_dssp ECS--SCHH---HHHHHHHHTCSEEEECGGGC
T ss_pred eeC--CHHH---HHHHHHHcCCCEEEEccccc
Confidence 011 2233 35566789999999998654
No 97
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=57.32 E-value=19 Score=38.66 Aligned_cols=77 Identities=26% Similarity=0.346 Sum_probs=46.1
Q ss_pred CCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCC--hHHHHHHHHhcC-CCCc--ccchhhhHHHHhc
Q 005965 218 NFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRH--IHETREWILRNS-AVPV--GTVPIYQALEKVD 291 (667)
Q Consensus 218 gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgd--i~~~R~~Il~ns-pvPV--GTVPIYqAl~k~~ 291 (667)
.-+.-||+.+|+..+ -++.++..+++|+|.|- |.+.|.. ..++=++|-+.. .+|| |+|
T Consensus 215 ~grl~v~aavG~~~~------~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v---------- 278 (490)
T 4avf_A 215 QGRLRVGAAVGTGAD------TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNI---------- 278 (490)
T ss_dssp TSCBCCEEEECSSTT------HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEE----------
T ss_pred cCcceeeeeeccccc------hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeee----------
Confidence 345678888888642 36667778888999874 6666532 123334444444 2333 322
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 292 GIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 292 g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
.|.+. .+.-.+.|+|++.+
T Consensus 279 -----~t~e~----a~~l~~aGaD~I~v 297 (490)
T 4avf_A 279 -----ATAEA----AKALAEAGADAVKV 297 (490)
T ss_dssp -----CSHHH----HHHHHHTTCSEEEE
T ss_pred -----CcHHH----HHHHHHcCCCEEEE
Confidence 23333 34456789999987
No 98
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=57.22 E-value=13 Score=37.10 Aligned_cols=109 Identities=19% Similarity=0.170 Sum_probs=64.2
Q ss_pred HHHHHHHhCCcEeeecCC---CCChHHHHHHHHhcCCC----CcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 242 KVQWATMWGADTVMDLST---GRHIHETREWILRNSAV----PVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLST---Ggdi~~~R~~Il~nspv----PVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
.+..|.++|..||+|++| +.++..+++ +-+..++ .+|-=| |.-. .....+.+++.+.+++++++|+
T Consensus 52 ~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~-la~~~~~~i~~~~G~hp-~~p~-----~~~~~~~~~l~~~l~~~~~~gi 124 (330)
T 2ob3_A 52 GLRRARAAGVRTIVDVSTFDIGRDVSLLAE-VSRAADVHIVAATGLWF-DPPL-----SMRLRSVEELTQFFLREIQYGI 124 (330)
T ss_dssp HHHHHHHTTCCEEEECCCGGGTCCHHHHHH-HHHHHTCEEECEEECCS-CCCH-----HHHTCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEeCCCCCcCCCHHHHHH-HHHHhCCcEEEEecCCc-CCCc-----hhccCCHHHHHHHHHHHHHhhc
Confidence 367789999999999998 467877776 5555553 344443 1100 1123456788888888888877
Q ss_pred CEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 315 DYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 315 DfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
+- .+ .|+..| .=|=+ | ....--.+-|...++++++++..+.+=
T Consensus 125 ~~----~~----------~k~~ai-EiGld----~----~~~~~q~~~f~~q~~lA~~~glPv~iH 167 (330)
T 2ob3_A 125 ED----TG----------IRAGII-KVATT----G----KATPFQELVLKAAARASLATGVPVTTH 167 (330)
T ss_dssp TT----SC----------CCCSEE-EEECS----S----SCCHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred cc----cc----------cceeEE-EEeCC----C----CCCHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 42 00 022111 22211 2 000112345899999999999777643
No 99
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=56.55 E-value=11 Score=38.23 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=67.7
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHHHHhcCCCCcccchhhhHHHHhcCC
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREWILRNSAVPVGTVPIYQALEKVDGI 293 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~ 293 (667)
-.|||.+-||-.......+.-+.-.++|++.|||-| +++.- .||.+.+++.|-.-.... +.+|+ ..+-+
T Consensus 93 s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~-~~~~l-KVIlE---- 166 (260)
T 3r12_A 93 TDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESV-KGKVV-KVIIE---- 166 (260)
T ss_dssp SCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHT-TTSEE-EEECC----
T ss_pred CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhc-CCCcE-EEEEe----
Confidence 347888888877777788888889999999999875 55432 357888877765433221 22343 11111
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 294 AENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 294 ~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.-.||.|++....+--++.|.||+=-=.|
T Consensus 167 t~~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 167 TCYLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred CCCCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 13679999999999999999999854443
No 100
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=56.40 E-value=41 Score=31.40 Aligned_cols=90 Identities=17% Similarity=0.124 Sum_probs=58.4
Q ss_pred HHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccC
Q 005965 302 FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGD 381 (667)
Q Consensus 302 ~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGD 381 (667)
+.+.++.-++.|+|++-+...-.... .-...+++.+++++|+++++..-
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~-------------------------------~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNL-------------------------------SDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGS-------------------------------CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCcccc-------------------------------chhhHHHHHHHHHHcCCceEEec
Confidence 45566666778999999875421000 01568899999999999988743
Q ss_pred CCC-CCCccCCCcHHHH-HHHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 382 GLR-PGSIYDANDTAQF-AELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 382 GLR-PG~iaDA~D~AQ~-~EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
++- ...+.+. |.... .-+..+-+..+.|.+.|+.+++ +|.|
T Consensus 68 ~~~~~~~l~~~-d~~~r~~~~~~~~~~i~~a~~lG~~~v~-~~~~ 110 (290)
T 2qul_A 68 GLKSEYDFASP-DKSVRDAGTEYVKRLLDDCHLLGAPVFA-GLTF 110 (290)
T ss_dssp EECGGGCTTCS-CHHHHHHHHHHHHHHHHHHHHHTCSEEE-EEEE
T ss_pred CCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCEEE-eecc
Confidence 321 1233333 33322 3355677888999999999998 6544
No 101
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=55.65 E-value=58 Score=32.60 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH--hce
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ--YDV 375 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~--YDV 375 (667)
+.+.|.+..++-.++|.+.+-||.|- |+ -+.. ++++-.|+ .|+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~---------------------------------~~-~~d~-~~v~avr~~g~~~ 183 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE---------------------------------NL-KEDI-EAVEEIAKVTRGA 183 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS---------------------------------CH-HHHH-HHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC---------------------------------CH-HHHH-HHHHHHHhhCCCC
Confidence 67889999999999999999999873 11 0011 22222232 466
Q ss_pred eEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeE-EeeCCCCCCCCchHHHHHHHHH
Q 005965 376 ALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQV-MNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 376 tlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQV-MIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
.|.+ |+|..-...|.+. +.++..++|+.+ +||-| +|-++++.--++.++
T Consensus 184 ~l~v----------Dan~~~~~~~a~~---~~~~l~~~~i~~~~iE~P--~~~~~~~~~~~l~~~ 233 (345)
T 2zad_A 184 KYIV----------DANMGYTQKEAVE---FARAVYQKGIDIAVYEQP--VRREDIEGLKFVRFH 233 (345)
T ss_dssp EEEE----------ECTTCSCHHHHHH---HHHHHHHTTCCCSEEECC--SCTTCHHHHHHHHHH
T ss_pred eEEE----------ECCCCCCHHHHHH---HHHHHHhcCCCeeeeeCC--CCcccHHHHHHHHHh
Confidence 6654 4454333444444 344455678862 69988 455777666555554
No 102
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=55.60 E-value=10 Score=37.09 Aligned_cols=85 Identities=16% Similarity=0.221 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHhCCcEe---eecCCCCChHHHHHHH--HhcCCCCcccchhhhHHH--HhcCCCCCCCHHHHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTV---MDLSTGRHIHETREWI--LRNSAVPVGTVPIYQALE--KVDGIAENLSWEVFRDTLI 307 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtV---MDLSTGgdi~~~R~~I--l~nspvPVGTVPIYqAl~--k~~g~~~~lt~e~~~d~ie 307 (667)
+.++=++++..+...|||.| +|+...-+...+.+.+ ||... |.+||-=.+. .-||. -+++.+.+++.++
T Consensus 15 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~---~~~PiI~T~R~~~eGG~-~~~~~~~~~~ll~ 90 (238)
T 1sfl_A 15 SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQ---DSFKLLVTYRTKLQGGY-GQFTNDSYLNLIS 90 (238)
T ss_dssp ---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC------CCSEEEEECCBGGGTSC-BCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhc---cCCCEEEEeeccccCCC-CCCCHHHHHHHHH
Confidence 44444666777888899997 7887665666555543 44432 4566643332 11454 5889999999999
Q ss_pred HHHhc-CCCEEEEeccc
Q 005965 308 EQAEQ-GVDYFTIHAGV 323 (667)
Q Consensus 308 eQAeq-GVDfmTIHaGv 323 (667)
.-++. |+||+.|-.-.
T Consensus 91 ~~~~~~~~d~iDvEl~~ 107 (238)
T 1sfl_A 91 DLANINGIDMIDIEWQA 107 (238)
T ss_dssp HGGGCTTCCEEEEECCT
T ss_pred HHHHhCCCCEEEEEccC
Confidence 88887 69999986643
No 103
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=55.55 E-value=2e+02 Score=30.00 Aligned_cols=41 Identities=5% Similarity=-0.089 Sum_probs=26.4
Q ss_pred ceeEeeccccCC-----CCCChHHHHHHHHHHHHhCCcEeeecCCCC
Q 005965 220 LVKVNANIGNSA-----VASSIEEEVYKVQWATMWGADTVMDLSTGR 261 (667)
Q Consensus 220 ~tKVNANIGtS~-----~~~~ieeEveKl~~A~~~GADtVMDLSTGg 261 (667)
++.+.+++++.. ...+.++=+++++.+++.|-.+| -+-.|+
T Consensus 124 ~v~~yas~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~i-KlK~g~ 169 (412)
T 4e4u_A 124 RLRSYTYLYPKNAKGEYDYDDPDLAAECAAENVKLGFTAV-KFDPAG 169 (412)
T ss_dssp SEEEEEECCCBCTTSCBCSSCHHHHHHHHHHHHHHTCSEE-EECCSC
T ss_pred eeEEEEeccCCcccccccCCCHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 455556555321 23467777888888999998776 565554
No 104
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=55.55 E-value=29 Score=34.51 Aligned_cols=77 Identities=13% Similarity=-0.062 Sum_probs=44.9
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCC---cccchhhhHHH-----------------------HhcCCCCC
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVP---VGTVPIYQALE-----------------------KVDGIAEN 296 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvP---VGTVPIYqAl~-----------------------k~~g~~~~ 296 (667)
+..+++.|.-||.|+.. ....+|+.+-.....- +-+-|...... ...-....
T Consensus 94 ~~~~l~~GvTtv~d~~~--~~~~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (426)
T 2r8c_A 94 MRAMLRRGFTTVRDAGG--AGYPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVA 171 (426)
T ss_dssp HHHHHHTTEEEEEECSS--CCHHHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEEC
T ss_pred HHHHHhCCeEEEEeCCC--chHHHHHHHHcCCCCCCeEEecCCcccCCCCCccccccccccccccccccccccccccccc
Confidence 45669999999999864 3457887765421110 00001000000 00000112
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
-+.+++++.++++.+.|+|++-+.+
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~ 196 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMA 196 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 3568899999999999999988876
No 105
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=55.51 E-value=41 Score=34.19 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=49.5
Q ss_pred cCchhhhHHHHHHHHhHhceeEeccCCCCCCCcc-----------CC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 356 ENFAYEHWDEILDICNQYDVALSIGDGLRPGSIY-----------DA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 356 ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~ia-----------DA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
|-|+. +++.+-++.++.++-+.+|+.+.- .. |. -|..++.-+...-++++.|.++|++||+-+-
T Consensus 220 EqP~~-d~~~~~~l~~~~~iPI~~dE~~~~--~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~ 296 (378)
T 2qdd_A 220 EQPCQ-TLDQCAHVARRVANPIMLDECLHE--FSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDV 296 (378)
T ss_dssp ECCSS-SHHHHHHHHTTCCSCEEECTTCCS--HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCS
T ss_pred EcCCC-CHHHHHHHHHhCCCCEEECCCcCC--HHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 66776 888888888888888888876641 11 11 1334433444455778889999999999643
Q ss_pred CCCCCCchHHHHHHHHH
Q 005965 423 GHIPMHKIPENMQKQLE 439 (667)
Q Consensus 423 GHVPl~~I~~Nv~lqk~ 439 (667)
. -.-|-...-+|.-
T Consensus 297 ~---es~i~~aa~~hla 310 (378)
T 2qdd_A 297 G---GTALADTAALHLA 310 (378)
T ss_dssp S---CCHHHHHHHHHHH
T ss_pred C---CcHHHHHHHHHHH
Confidence 2 3334444444443
No 106
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.38 E-value=36 Score=34.87 Aligned_cols=126 Identities=13% Similarity=0.024 Sum_probs=70.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccc--------------cccHHHHHHHHH--cCCc---
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVS--------------RGGSIHAKWCLA--YHKE--- 356 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVS--------------RGGSi~a~Wml~--h~~E--- 356 (667)
.-++|..++..++|.++|.|++-|-+|......+..-.|+..+|. .=-..+ .-.+. .++-
T Consensus 33 ~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~-eaaL~~~~Ga~iIN 111 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVI-EAGLKCLQGKSIVN 111 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHH-HHHHHHCSSCCEEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHH-HHHHHhcCCCCEEE
Confidence 456799999999999999999999987543221112245554443 111222 22333 2331
Q ss_pred --Cch--hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHH-HHHHHHHHH-HhcCC--eEEeeCCCCCCCC
Q 005965 357 --NFA--YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELL-TQGELTRRA-WDKDV--QVMNEGPGHIPMH 428 (667)
Q Consensus 357 --NpL--Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~-~LGEL~krA-~e~gV--QVMIEGPGHVPl~ 428 (667)
|-+ =+.|+++++++++|++.+-+-=--.-|- .+ + .++-. ..-++.+.| .++|| .=+|==||--|+.
T Consensus 112 dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~-p~--t---~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~g 185 (300)
T 3k13_A 112 SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQ-AD--T---AARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVA 185 (300)
T ss_dssp EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEE-CC--S---HHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCS
T ss_pred eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCC-CC--C---HHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccC
Confidence 222 2478899999999998765421000121 11 1 12222 233455554 88999 3344467776553
No 107
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=55.20 E-value=9.9 Score=39.21 Aligned_cols=61 Identities=30% Similarity=0.349 Sum_probs=39.9
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
++.|+++|||.|| |-+. ++..+|+.+=.. -+.|+|- +-|.+ |. ++|.+-++.||||+.+=+
T Consensus 222 ~~eAl~aGaD~I~-LDn~-~~~~l~~av~~i----~~~v~ie-----aSGGI---~~----~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 222 LRTALAHGARSVL-LDNF-TLDMMRDAVRVT----EGRAVLE-----VSGGV---NF----DTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHTTCEEEE-EESC-CHHHHHHHHHHH----TTSEEEE-----EESSC---ST----TTHHHHHHTTCSEEECGG
T ss_pred HHHHHHcCCCEEE-ECCC-CHHHHHHHHHHh----CCCCeEE-----EEcCC---CH----HHHHHHHHcCCCEEEECC
Confidence 5668889999998 6554 788888776432 1334432 22332 33 567777899999997644
No 108
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=54.83 E-value=1.8e+02 Score=29.24 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCC-ChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGR-HIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGg-di~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
+.++-++.+..+.+.|-++| .+-.|. ++..-.+.|- |.. +| .+|| ...++ ...|.++..+.+++-.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~d~~~v~avr~a---~g~~~~l---~vDan---~~~~~~~a~~~~~~l~ 209 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTL-KIKVGKDDIATDIARIQEIRKR---VGSAVKL---RLDAN---QGWRPKEAVTAIRKME 209 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEE-EEECCSSCHHHHHHHHHHHHHH---HCSSSEE---EEECT---TCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeE-EEEeCCCCHHHHHHHHHHHHHH---hCCCCeE---EEECC---CCCCHHHHHHHHHHHh
Confidence 56776788888889998776 455564 5543332221 111 11 1222 11122 2357788777777655
Q ss_pred h--cCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCCC
Q 005965 311 E--QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPGS 387 (667)
Q Consensus 311 e--qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~ 387 (667)
+ .||+|+ |-|+ ..+++.+-++.++.++-+.+|..+.--.
T Consensus 210 ~~~~~i~~i--------------------------------------EqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~ 251 (366)
T 1tkk_A 210 DAGLGIELV--------------------------------------EQPVHKDDLAGLKKVTDATDTPIMADESVFTPR 251 (366)
T ss_dssp HTTCCEEEE--------------------------------------ECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHH
T ss_pred hcCCCceEE--------------------------------------ECCCCcccHHHHHHHHhhCCCCEEEcCCCCCHH
Confidence 5 678776 1222 1357777777777778777776652100
Q ss_pred ---------ccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 388 ---------IYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 388 ---------iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
-+|. -|..++.-+-..-++++.|.++|++||+-+.+.
T Consensus 252 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 252 QAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred HHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 0000 133333334444567788999999999966543
No 109
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=54.81 E-value=1.8e+02 Score=29.18 Aligned_cols=149 Identities=10% Similarity=0.083 Sum_probs=87.9
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCC-ChHHHHHHH---HhcCCCCcc-cchhhhHHHHhcCCCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGR-HIHETREWI---LRNSAVPVG-TVPIYQALEKVDGIAE 295 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGg-di~~~R~~I---l~nspvPVG-TVPIYqAl~k~~g~~~ 295 (667)
+.+++.+| ..++++=++.++.+.+.|-++| .+-.|. ++....+.| .+.. | .+||. .+++ .
T Consensus 134 vp~~~~~g----~~~~~~~~~~a~~~~~~Gf~~i-Kik~g~~~~~~~~e~v~avr~a~----g~~~~l~---vDan---~ 198 (359)
T 1mdl_A 134 VQAYDSHS----LDGVKLATERAVTAAELGFRAV-KTRIGYPALDQDLAVVRSIRQAV----GDDFGIM---VDYN---Q 198 (359)
T ss_dssp EEEEEECC----SCHHHHHHHHHHHHHHTTCSEE-EEECCCSSHHHHHHHHHHHHHHH----CSSSEEE---EECT---T
T ss_pred eeeeeecC----CCCHHHHHHHHHHHHHcCCCEE-EEecCCCCHHHHHHHHHHHHHHh----CCCCEEE---EECC---C
Confidence 45555544 2356666778888889998887 465564 543332222 1111 1 23321 1222 2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYD 374 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YD 374 (667)
..|.++..+.+.+-.+.||+|+- -|+ ..+++.+-++.++.+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE--------------------------------------~P~~~~~~~~~~~l~~~~~ 240 (359)
T 1mdl_A 199 SLDVPAAIKRSQALQQEGVTWIE--------------------------------------EPTLQHDYEGHQRIQSKLN 240 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCEE--------------------------------------CCSCTTCHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHhCCCeEE--------------------------------------CCCChhhHHHHHHHHHhCC
Confidence 35778887777776677999761 222 135777777777888
Q ss_pred eeEeccCCCCCC---------CccC--CCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 375 VALSIGDGLRPG---------SIYD--ANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 375 VtlSLGDGLRPG---------~iaD--A~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
+-+.++..++-- .-+| .-|..++.-+-..-++++.|+++|++||+-+.
T Consensus 241 iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~ 299 (359)
T 1mdl_A 241 VPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLF 299 (359)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBSC
T ss_pred CCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeeccH
Confidence 888887766420 0011 12344444455556778889999999998643
No 110
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=54.80 E-value=69 Score=29.53 Aligned_cols=79 Identities=13% Similarity=0.055 Sum_probs=49.5
Q ss_pred hhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeC-CC-----CCCCCchH
Q 005965 360 YEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEG-PG-----HIPMHKIP 431 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEG-PG-----HVPl~~I~ 431 (667)
.++|.+.+++|++.++. +.+.-|-.|.. +...+.+++.+ ..|.+|++.|.++||++.+|- ++ .-.++..+
T Consensus 82 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~--~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~ 159 (275)
T 3qc0_A 82 IDDNRRAVDEAAELGADCLVLVAGGLPGG--SKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLG 159 (275)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECBCCCTT--CCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCCCCCC--CcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHH
Confidence 57899999999999863 22222223211 12233444443 458899999999999999995 21 12455666
Q ss_pred HHHHHHHHh
Q 005965 432 ENMQKQLEW 440 (667)
Q Consensus 432 ~Nv~lqk~l 440 (667)
+-.++-+++
T Consensus 160 ~~~~l~~~~ 168 (275)
T 3qc0_A 160 QALDICETL 168 (275)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 655555553
No 111
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=54.75 E-value=39 Score=32.38 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=49.6
Q ss_pred HHHHHH-HHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCE
Q 005965 238 EEVYKV-QWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDY 316 (667)
Q Consensus 238 eEveKl-~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDf 316 (667)
.+++.+ +.|.+.|||-|- ++.+.+++.+++. .+.++ +|++- .|.+..-+.+++++.+.+-.+.|+|.
T Consensus 166 ~~~~~~a~~a~~~Gad~i~-~~~~~~~~~l~~i-~~~~~-----ipvva-----~GGi~~~~~~~~~~~~~~~~~~Ga~g 233 (273)
T 2qjg_A 166 ELVAHAARLGAELGADIVK-TSYTGDIDSFRDV-VKGCP-----APVVV-----AGGPKTNTDEEFLQMIKDAMEAGAAG 233 (273)
T ss_dssp HHHHHHHHHHHHTTCSEEE-ECCCSSHHHHHHH-HHHCS-----SCEEE-----ECCSCCSSHHHHHHHHHHHHHHTCSE
T ss_pred hHHHHHHHHHHHcCCCEEE-ECCCCCHHHHHHH-HHhCC-----CCEEE-----EeCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 467777 889999999775 6666788888764 44444 44432 24434336899999998888899997
Q ss_pred EEE
Q 005965 317 FTI 319 (667)
Q Consensus 317 mTI 319 (667)
+.+
T Consensus 234 v~v 236 (273)
T 2qjg_A 234 VAV 236 (273)
T ss_dssp EEC
T ss_pred EEe
Confidence 755
No 112
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=54.70 E-value=48 Score=32.67 Aligned_cols=180 Identities=12% Similarity=0.116 Sum_probs=104.3
Q ss_pred cchhhhHHHHhcCCCCCC----CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccC---ccccccHH-------
Q 005965 280 TVPIYQALEKVDGIAENL----SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTG---IVSRGGSI------- 345 (667)
Q Consensus 280 TVPIYqAl~k~~g~~~~l----t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~Rvtg---IVSRGGSi------- 345 (667)
-|||=|.++. | +..| +++++...+++-.+.|++-+.+|.|...... ... ++ =++.+++|
T Consensus 20 i~aiDh~~~~--g-p~~~~~~~~~~di~~~~~~a~~~~~~av~v~~~~v~~~~-~~~---~~liv~~~~~~~~~g~~~~~ 92 (263)
T 1w8s_A 20 ILAYDHGIEH--G-PADFMDNPDSADPEYILRLARDAGFDGVVFQRGIAEKYY-DGS---VPLILKLNGKTTLYNGEPVS 92 (263)
T ss_dssp EEECCHHHHT--C-GGGGSSSGGGGCHHHHHHHHHHHTCSEEEECHHHHHHHC-CSS---SCEEEECEECCTTCCSSCCC
T ss_pred EEECCCCcCc--C-ccccccCcchhhHHHHHHHHHhhCCCEEEECHHHHHHhh-cCC---CcEEEEEeCCCCcCCCCccc
Confidence 4677777642 2 2223 8999999999999999999999999855443 111 11 11222222
Q ss_pred ----HHHHHHHc-------------CCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHH
Q 005965 346 ----HAKWCLAY-------------HKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTR 408 (667)
Q Consensus 346 ----~a~Wml~h-------------~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~k 408 (667)
-+...+.. ..+.-.|+..-++.+.|++|++.+-+=+-+|-..+.+..+. ..+.+.++
T Consensus 93 ~~~~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~------~~i~~a~~ 166 (263)
T 1w8s_A 93 VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAP------EIVAYAAR 166 (263)
T ss_dssp EESSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCH------HHHHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCH------HHHHHHHH
Confidence 13333322 33444677778888889999987654333432222222121 23445577
Q ss_pred HHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhhcccceeee
Q 005965 409 RAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCY 482 (667)
Q Consensus 409 rA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~~GadfLCY 482 (667)
.|.+.|+-..-=|- |- . .+.++..++.|...|....|=+..+ .++..-.-|-.++. +||+-++.
T Consensus 167 ~a~~~GAD~vkt~~---~~-~-~e~~~~~~~~~~~~pV~asGGi~~~---~~~~~l~~i~~~~~--aGA~Gvsv 230 (263)
T 1w8s_A 167 IALELGADAMKIKY---TG-D-PKTFSWAVKVAGKVPVLMSGGPKTK---TEEDFLKQVEGVLE--AGALGIAV 230 (263)
T ss_dssp HHHHHTCSEEEEEC---CS-S-HHHHHHHHHHTTTSCEEEECCSCCS---SHHHHHHHHHHHHH--TTCCEEEE
T ss_pred HHHHcCCCEEEEcC---CC-C-HHHHHHHHHhCCCCeEEEEeCCCCC---CHHHHHHHHHHHHH--cCCeEEEE
Confidence 88888887765552 32 2 2578888888854499888854311 24444444444443 46664443
No 113
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=54.60 E-value=1.8e+02 Score=29.23 Aligned_cols=148 Identities=13% Similarity=0.144 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHHHhCCcEe-eecCCCCChHHH---HHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTV-MDLSTGRHIHET---REWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtV-MDLSTGgdi~~~---R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
++++-++.++.+.+.|-++| +.++-..|+..+ |+.+ ...++.+ .+++ ..|.++ .+.+++-.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a~-~~~~l~v----------Dan~---~~~~~~-~~~~~~l~ 205 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVLKAVREAF-PEATLTA----------DANS---AYSLAN-LAQLKRLD 205 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC-TTSCEEE----------ECTT---CCCGGG-HHHHHGGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHHHHHHHHc-CCCeEEE----------ecCC---CCCHHH-HHHHHHHH
Confidence 67777788888889998776 223323344433 3322 1111111 1122 234455 55555544
Q ss_pred hcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCC----
Q 005965 311 EQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRP---- 385 (667)
Q Consensus 311 eqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRP---- 385 (667)
+.|++|+- -|+ -.+++.+-++.++.++-+.+|+.+.-
T Consensus 206 ~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~ 247 (369)
T 2zc8_A 206 ELRLDYIE--------------------------------------QPLAYDDLLDHAKLQRELSTPICLDESLTGAEKA 247 (369)
T ss_dssp GGCCSCEE--------------------------------------CCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHH
T ss_pred hCCCcEEE--------------------------------------CCCCcccHHHHHHHHhhCCCCEEEcCccCCHHHH
Confidence 55677665 111 23456666666667777776665521
Q ss_pred ------CCccC--CCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 386 ------GSIYD--ANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 386 ------G~iaD--A~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
|+ .| .-|..++.-|-..-++++.|+++|+++|+ ||+.-.-|-...-+|.-
T Consensus 248 ~~~i~~~~-~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~---~~~~es~i~~aa~~hla 305 (369)
T 2zc8_A 248 RKAIELGA-GRVFNVKPARLGGHGESLRVHALAESAGIPLWM---GGMLEAGVGRAHNLHLA 305 (369)
T ss_dssp HHHHHHTC-CSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE---CCCCCCHHHHHHHHHHT
T ss_pred HHHHHhCC-CCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEe---cCccccHHHHHHHHHHH
Confidence 00 01 01333333344445778889999999988 77765556554444443
No 114
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=54.58 E-value=1.2e+02 Score=28.50 Aligned_cols=65 Identities=15% Similarity=0.023 Sum_probs=42.0
Q ss_pred hHHHHHHHHhHhceeEec-c---CCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCCCC
Q 005965 362 HWDEILDICNQYDVALSI-G---DGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGHIPM 427 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSL-G---DGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHVPl 427 (667)
..+++.+.+++|++.++. . ..+-+|.-.=+.|....++ +..+-+..+.|.+.|+.+++=.|| .|-
T Consensus 49 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~ 118 (269)
T 3ngf_A 49 DADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG-ITE 118 (269)
T ss_dssp CHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCT
T ss_pred CHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCC
Confidence 368999999999998874 2 1222321111223332222 345677899999999999988888 653
No 115
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=54.33 E-value=20 Score=32.99 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=42.4
Q ss_pred CChHHHHHHHHHHHHhCCcEe----eecCCCCC----hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTV----MDLSTGRH----IHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDT 305 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtV----MDLSTGgd----i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ 305 (667)
.|...=.+-++.+.+.|+|.| ||.+.-.+ +..++ +|.+.+++|+. ++..+.+. +. .
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~-~i~~~~~~~~~----------v~l~v~d~--~~---~ 76 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVA-SMRKHSKLVFD----------CHLMVVDP--ER---Y 76 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHH-HHHTTCCSEEE----------EEEESSSG--GG---G
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHH-HHHHhCCCCEE----------EEEeecCH--HH---H
Confidence 344333445667778899985 78664445 34443 45555444431 12222221 11 3
Q ss_pred HHHHHhcCCCEEEEecccc
Q 005965 306 LIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 306 ieeQAeqGVDfmTIHaGv~ 324 (667)
++.-++.|+|++++|.+-.
T Consensus 77 i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHcCCCEEEEccCcc
Confidence 4555667999999999765
No 116
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=54.30 E-value=39 Score=34.26 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCC
Q 005965 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGL 383 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGL 383 (667)
..+++-.+.|+|.+++|+-+..+. .|.-.++..-++.+.|++|++-|=+==..
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~---------------------------~~~~~~~~i~~v~~~~~~~G~p~lv~~~~ 164 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDE---------------------------DAQQRLNMVKEFNELCHSNGLLSIIEPVV 164 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTS---------------------------CHHHHHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCc---------------------------cHHHHHHHHHHHHHHHHHcCCcEEEEEEC
Confidence 455666788999999887544221 12345788889999999999976442222
Q ss_pred CCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEE-eeCC----CCCCCCchHHHHHHHHHhcCCCC-ccccCcc
Q 005965 384 RPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVM-NEGP----GHIPMHKIPENMQKQLEWCNEAP-FYTLGPL 452 (667)
Q Consensus 384 RPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVM-IEGP----GHVPl~~I~~Nv~lqk~lC~~AP-fYvLGPL 452 (667)
|...+.|..|. . ..+.+-+++|-+.|+.+. ++-| | ..+.+.+-++.|...|. .| .+++|=.
T Consensus 165 ~g~~v~~~~~~---~--~~v~~aa~~a~~lGaD~iKv~~~~~~~g--~~~~~~~vv~~~~~~~~-~P~Vv~aGG~ 231 (304)
T 1to3_A 165 RPPRCGDKFDR---E--QAIIDAAKELGDSGADLYKVEMPLYGKG--ARSDLLTASQRLNGHIN-MPWVILSSGV 231 (304)
T ss_dssp CCCSSCSCCCH---H--HHHHHHHHHHTTSSCSEEEECCGGGGCS--CHHHHHHHHHHHHHTCC-SCEEECCTTS
T ss_pred CCCccccCCCh---h--HHHHHHHHHHHHcCCCEEEeCCCcCCCC--CHHHHHHHHHhccccCC-CCeEEEecCC
Confidence 33345554454 1 456677899999999987 5554 5 44566666777777785 69 8888765
No 117
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=53.76 E-value=23 Score=32.89 Aligned_cols=78 Identities=12% Similarity=0.054 Sum_probs=51.0
Q ss_pred hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCC--C------CCCCch
Q 005965 360 YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEGPG--H------IPMHKI 430 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPG--H------VPl~~I 430 (667)
.++|.+.+++|++.++..=.. ++-||. +.....+++.+ ..|.+|++.|.++||++.+|-=+ | --++..
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~-~~~p~~--~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ 159 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVTA-FLWPSM--DEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSL 159 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEEE-ECCSEE--SSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSH
T ss_pred HHHHHHHHHHHHHcCCCEEEE-eecCCC--CCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCH
Confidence 468999999999998753221 234543 22223455544 46889999999999999999532 2 125666
Q ss_pred HHHHHHHHHh
Q 005965 431 PENMQKQLEW 440 (667)
Q Consensus 431 ~~Nv~lqk~l 440 (667)
++-.++-+++
T Consensus 160 ~~~~~l~~~v 169 (281)
T 3u0h_A 160 ADLKTFWEAI 169 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 6666665554
No 118
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=53.63 E-value=38 Score=32.85 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhcCCCEEEEecccccc
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLR 326 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~ 326 (667)
+.....++.-++.|+|++|+|+-...+
T Consensus 79 ~t~~~~i~~~~~~Gad~vTvH~~~g~~ 105 (245)
T 1eix_A 79 NTAAHAVAAAADLGVWMVNVHASGGAR 105 (245)
T ss_dssp HHHHHHHHHHHHHTCSEEEEBGGGCHH
T ss_pred HHHHHHHHHHHhCCCCEEEEeccCCHH
Confidence 334446777788999999999865444
No 119
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=53.05 E-value=53 Score=33.38 Aligned_cols=124 Identities=13% Similarity=0.048 Sum_probs=70.4
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecC----CC---------CChHHHHHHHHhcCCCCcc--cchhhhHHHHhcCCCCCCCH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLS----TG---------RHIHETREWILRNSAVPVG--TVPIYQALEKVDGIAENLSW 299 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLS----TG---------gdi~~~R~~Il~nspvPVG--TVPIYqAl~k~~g~~~~lt~ 299 (667)
++++ +++.+.+.|.|.| +|. .. .++.++|+++ +...+.+. +.+.++--.-..|.+..-+.
T Consensus 34 ~~~e---~l~~aa~~G~~~V-El~~~~l~p~~~~~~~~~~~~~~l~~~l-~~~GL~i~~~~~~~f~~p~~~~g~l~spd~ 108 (393)
T 1xim_A 34 DPVE---AVHKLAEIGAYGI-TFHDDDLVPFGSDAQTRDGIIAGFKKAL-DETGLIVPMVTTNLFTHPVFKDGGFTSNDR 108 (393)
T ss_dssp CHHH---HHHHHHHHTCSEE-ECBHHHHSCTTCCHHHHHHHHHHHHHHH-HHHTCBCCEEECCCSSSGGGTTCSTTCSSH
T ss_pred CHHH---HHHHHHHhCCCEE-EeecccCCCccccccccHHHHHHHHHHH-HHhCCEEEEEecCCcCCcccccCCCCCCCH
Confidence 5554 5666677899988 455 21 2466677655 44455543 32222100001233333333
Q ss_pred -------HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH
Q 005965 300 -------EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ 372 (667)
Q Consensus 300 -------e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~ 372 (667)
+.+.+.|+--++-|+.++.+|.|-.-...+ + ....-..| .-+-+.|++|++++++
T Consensus 109 ~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~-------~----~~~~~~~~-------~~~~e~L~~l~~~A~~ 170 (393)
T 1xim_A 109 SVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYD-------S----AKDVSAAL-------DRYREALNLLAQYSED 170 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSG-------G----GCCHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCC-------c----cCCHHHHH-------HHHHHHHHHHHHHHHh
Confidence 567778888888999999999983100000 0 01112222 1246788999999998
Q ss_pred h--ceeEeccC
Q 005965 373 Y--DVALSIGD 381 (667)
Q Consensus 373 Y--DVtlSLGD 381 (667)
+ +|+|.|=.
T Consensus 171 ~g~gv~l~lE~ 181 (393)
T 1xim_A 171 RGYGLRFAIEP 181 (393)
T ss_dssp HTCCCEEEEEC
T ss_pred cCCCcEEEEec
Confidence 8 89998865
No 120
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=52.99 E-value=1.2e+02 Score=30.93 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.+.+.|.+..++-.++|.|.+=||.|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g 171 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVG 171 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcC
Confidence 47889999999999999999999987
No 121
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=52.92 E-value=2.1e+02 Score=29.37 Aligned_cols=153 Identities=15% Similarity=0.122 Sum_probs=87.0
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecC---CCCCh-HHHHHHH--HhcCCCCcc-cchhhhHHHHhcCCCCCC--CHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLS---TGRHI-HETREWI--LRNSAVPVG-TVPIYQALEKVDGIAENL--SWEVFRD 304 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLS---TGgdi-~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g~~~~l--t~e~~~d 304 (667)
.++++=.+.++.+.+.|-++|= +- .|+++ ....+.| +|.. +| .+||. ..++ ... |.++..+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iK-ik~spvG~~~~~~~~e~v~avr~a---~G~d~~l~---vDan---~~~~~~~~~a~~ 213 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVK-FGWGPIGRGTVAADADQIMAAREG---LGPDGDLM---VDVG---QIFGEDVEAAAA 213 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEE-EESTTTTSSCHHHHHHHHHHHHHH---HCSSSEEE---EECT---TTTTTCHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCeEE-EcCCCCCCCHHHHHHHHHHHHHHH---hCCCCeEE---EECC---CCCCCCHHHHHH
Confidence 3677778888899999998873 43 46665 3322221 1111 11 12221 0122 234 6677777
Q ss_pred HHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHh-HhceeEeccCC
Q 005965 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICN-QYDVALSIGDG 382 (667)
Q Consensus 305 ~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k-~YDVtlSLGDG 382 (667)
.+.+-.+.||+|+- -|+ ..+++.+-++.+ +.++-+.+++.
T Consensus 214 ~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~~iPI~~dE~ 255 (401)
T 2hzg_A 214 RLPTLDAAGVLWLE--------------------------------------EPFDAGALAAHAALAGRGARVRIAGGEA 255 (401)
T ss_dssp THHHHHHTTCSEEE--------------------------------------CCSCTTCHHHHHHHHTTCCSSEEEECTT
T ss_pred HHHHHHhcCCCEEE--------------------------------------CCCCccCHHHHHHHHhhCCCCCEEecCC
Confidence 77666667888761 222 135777777777 77888888877
Q ss_pred CCC----------CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 383 LRP----------GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 383 LRP----------G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
++- |+ +|. -|..++.-+...-++++.|.++|+++|+ |..-.-|-...-+|.-
T Consensus 256 ~~~~~~~~~~i~~~~-~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~----h~~es~i~~~a~~hla 319 (401)
T 2hzg_A 256 AHNFHMAQHLMDYGR-IGFIQIDCGRIGGLGPAKRVADAAQARGITYVN----HTFTSHLALSASLQPF 319 (401)
T ss_dssp CSSHHHHHHHHHHSC-CSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEE----CCCSCHHHHHHHHGGG
T ss_pred cCCHHHHHHHHHCCC-CCEEEeCcchhCCHHHHHHHHHHHHHcCCEEec----CCCCcHHHHHHHHHHH
Confidence 643 11 111 1444544455555788889999999994 3443444444444443
No 122
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=52.75 E-value=54 Score=28.29 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=55.0
Q ss_pred HHHhCCcEeeecCCCCC---hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCC--CHHHHHHHHHHHHh-cCCCEEEE
Q 005965 246 ATMWGADTVMDLSTGRH---IHETREWILRNSAVPVGTVPIYQALEKVDGIAENL--SWEVFRDTLIEQAE-QGVDYFTI 319 (667)
Q Consensus 246 A~~~GADtVMDLSTGgd---i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l--t~e~~~d~ieeQAe-qGVDfmTI 319 (667)
-.++|-.+|.||.+... -+..+..=++...+|+--.| ..++ .++.+++.|.+..+ .|- =+-|
T Consensus 23 L~~~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~~-----------~~~l~~~~~~~~~~i~~~~~~~~~-~vlV 90 (151)
T 2e0t_A 23 LRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSP-----------AFDMSIHFQTAADFIHRALSQPGG-KILV 90 (151)
T ss_dssp HHHHTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSST-----------TSCTHHHHHHHHHHHHHHHHSTTC-CEEE
T ss_pred HHHcCCCEEEEccCCcccCCccccCCCCeEEEEEecccCC-----------CccHHHHHHHHHHHHHHHHhcCCC-cEEE
Confidence 34799999999987631 01111111112222322112 1222 13456666666655 343 3569
Q ss_pred eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH
Q 005965 320 HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ 372 (667)
Q Consensus 320 HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~ 372 (667)
||. . | +||-|+++++|++....- .+++.++..++
T Consensus 91 HC~---------a----G-~~RSg~~~~ayl~~~~~~-----~~~~a~~~v~~ 124 (151)
T 2e0t_A 91 HCA---------V----G-VSRSATLVLAYLMLYHHL-----TLVEAIKKVKD 124 (151)
T ss_dssp ECS---------S----S-SHHHHHHHHHHHHHHSCC-----CHHHHHHHHHH
T ss_pred ECC---------C----C-CChHHHHHHHHHHHHcCC-----CHHHHHHHHHH
Confidence 994 2 3 599999999998876543 56778887776
No 123
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=52.64 E-value=43 Score=29.76 Aligned_cols=122 Identities=19% Similarity=0.131 Sum_probs=66.3
Q ss_pred eEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCC---ChHHHHHHHHhcC--CCCcccchhhhHHHHhcCCCCC
Q 005965 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGR---HIHETREWILRNS--AVPVGTVPIYQALEKVDGIAEN 296 (667)
Q Consensus 222 KVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGg---di~~~R~~Il~ns--pvPVGTVPIYqAl~k~~g~~~~ 296 (667)
+++..+|+.....++++=+++ +.|-.+|.||+... +-..+.+.=++.. |++-+.+|--+.+
T Consensus 32 ~~~~~~~~~~~~~~~~~ll~~-----~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~d~~~p~~~~~--------- 97 (169)
T 1yn9_A 32 ELFAYVTSEEDVWTAEQIVKQ-----NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPPESIV--------- 97 (169)
T ss_dssp GGGTTBCCGGGCCCHHHHHHH-----CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCCSSSCCCHHHH---------
T ss_pred hHhhcCCCcccCCCHHHHHhh-----CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCCCCCCCCHHHH---------
Confidence 344456654445555443332 78999999997643 2222222111222 2222444433222
Q ss_pred CCHHHHHHHHHHHHh-cCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce
Q 005965 297 LSWEVFRDTLIEQAE-QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV 375 (667)
Q Consensus 297 lt~e~~~d~ieeQAe-qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV 375 (667)
..|++.+.+..+ +.=.-+-|||- + | +||-|.+++.|++....- .+++.++..++.
T Consensus 98 ---~~~~~~~~~~~~~~~~~~vlVHC~---------a----G-~~RTg~~va~~L~~~~~~-----~~~~a~~~~r~~-- 153 (169)
T 1yn9_A 98 ---QEFIDTVKEFTEKCPGMLVGVHCT---------H----G-INRTGYMVCRYLMHTLGI-----APQEAIDRFEKA-- 153 (169)
T ss_dssp ---HHHHHHHHHHHHHSTTSEEEEECS---------S----S-SHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH--
T ss_pred ---HHHHHHHHHHHHhCCCCcEEEECC---------C----C-CChHHHHHHHHHHHHhCC-----CHHHHHHHHHHH--
Confidence 224444433222 12236789994 2 4 589999999999874332 466777776653
Q ss_pred eEeccCCCCCCCcc
Q 005965 376 ALSIGDGLRPGSIY 389 (667)
Q Consensus 376 tlSLGDGLRPG~ia 389 (667)
||+++-
T Consensus 154 --------R~~~~~ 159 (169)
T 1yn9_A 154 --------RGHKIE 159 (169)
T ss_dssp --------HTSCCC
T ss_pred --------CCCCCC
Confidence 677665
No 124
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=57.88 E-value=2.9 Score=38.51 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=27.9
Q ss_pred HHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCC
Q 005965 349 WCLAYHKENFAYEHWDEILDICNQYDVALSIGDGL 383 (667)
Q Consensus 349 Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGL 383 (667)
=|..|+.|||-|..||.+-+--+-..+++.|...|
T Consensus 81 ~MQ~nGYENPTYKffE~~~~~~~~~~~~~~~~~~~ 115 (122)
T 2lp1_A 81 KMQQNGYENPTYKFFEQMQNQGRILQISITLAAAL 115 (122)
Confidence 48999999999999998877766666676665544
No 125
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=52.41 E-value=48 Score=34.05 Aligned_cols=152 Identities=18% Similarity=0.186 Sum_probs=84.2
Q ss_pred ChHHHHHHHHHHHHhCCcEeeec---CCCCCh------HHHHHHHHhcCCCCcccchhhhHHHHhcC---CCCCCCHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDL---STGRHI------HETREWILRNSAVPVGTVPIYQALEKVDG---IAENLSWEVF 302 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDL---STGgdi------~~~R~~Il~nspvPVGTVPIYqAl~k~~g---~~~~lt~e~~ 302 (667)
+++.=++++..-++.|||-| |+ ||.... .|+++ .+|+-+++.+.-+ ++.-..++.+
T Consensus 31 ~~~~a~~~a~~~v~~GAdII-DIGgeSTrPGa~~v~~~eE~~R-----------v~pvI~~l~~~~~vpiSIDT~~~~Va 98 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASML-DIGGESTRPGSSYVEIEEEIQR-----------VVPVIKAIRKESDVLISIDTWKSQVA 98 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEE-EEECCC-----CHHHHHHHHHH-----------HHHHHHHHHHHCCCEEEEECSCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEE-EECCCcCCCCCCCCCHHHHHHH-----------HHHHHHHHHhhCCceEEEeCCCHHHH
Confidence 67788888999999999854 76 443322 33333 1355555544312 3334455544
Q ss_pred HHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc--
Q 005965 303 RDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG-- 380 (667)
Q Consensus 303 ~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG-- 380 (667)
...|+ .|.|++- =|| |+ + + -+++++++++|++.+-|=
T Consensus 99 ~aAl~----aGa~iIN-------------------DVs-g~-------------~--~--d~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 99 EAALA----AGADLVN-------------------DIT-GL-------------M--G--DEKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp HHHHH----TTCCEEE-------------------ETT-TT-------------C--S--CTTHHHHHHHHTCEEEEECC
T ss_pred HHHHH----cCCCEEE-------------------ECC-CC-------------C--C--ChHHHHHHHHcCCCEEEEec
Confidence 44443 4776541 111 10 1 1 137899999999776652
Q ss_pred CCC-CCCCccC----------C---CcHHH-----HHH--HHHHHHHHHHHHhcCC---eEEeeCCCCCCCCchHHHHHH
Q 005965 381 DGL-RPGSIYD----------A---NDTAQ-----FAE--LLTQGELTRRAWDKDV---QVMNEGPGHIPMHKIPENMQK 436 (667)
Q Consensus 381 DGL-RPG~iaD----------A---~D~AQ-----~~E--L~~LGEL~krA~e~gV---QVMIEGPGHVPl~~I~~Nv~l 436 (667)
+|. +|..-.+ + .+... +.| +..|.+++++|.++|| ++++- ||.-.-...+.|+++
T Consensus 138 ~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilD-PGiGF~kt~~~nl~l 216 (314)
T 2vef_A 138 PVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLD-PGIGFGLTKKENLLL 216 (314)
T ss_dssp HHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEE-CCTTSSCCHHHHHHH
T ss_pred CCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEe-CCCCcccchHHHHHH
Confidence 221 3332100 0 01011 566 4668899999999999 56665 776333345788887
Q ss_pred HHHh
Q 005965 437 QLEW 440 (667)
Q Consensus 437 qk~l 440 (667)
-+++
T Consensus 217 l~~l 220 (314)
T 2vef_A 217 LRDL 220 (314)
T ss_dssp HHTH
T ss_pred HHHH
Confidence 7655
No 126
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=52.37 E-value=87 Score=29.35 Aligned_cols=81 Identities=10% Similarity=0.035 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHhHhceeE---eccC----CCCCCCcc--CCC-cHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCCCC
Q 005965 359 AYEHWDEILDICNQYDVAL---SIGD----GLRPGSIY--DAN-DTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGHIPM 427 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVtl---SLGD----GLRPG~ia--DA~-D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHVPl 427 (667)
..++|.+.+++|++.++.. ..+. |.++.... +.. ...++.. ...|.+|++.|.++||.+.+|--..-.+
T Consensus 88 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~ 167 (301)
T 3cny_A 88 ASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGI 167 (301)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSS
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCccc
Confidence 3678999999999998642 2221 33322111 111 3334433 4568899999999999999997322234
Q ss_pred CchHHHHHHHHH
Q 005965 428 HKIPENMQKQLE 439 (667)
Q Consensus 428 ~~I~~Nv~lqk~ 439 (667)
+...+-.++-++
T Consensus 168 ~~~~~~~~l~~~ 179 (301)
T 3cny_A 168 QTKEETDRLMAN 179 (301)
T ss_dssp CSHHHHHHHHHT
T ss_pred CCHHHHHHHHHh
Confidence 555554444444
No 127
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=52.18 E-value=82 Score=32.41 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH--h
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ--Y 373 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~--Y 373 (667)
+.+.++|++..++-.++|.+.+-||.|- +.+-...+.|-.|-+. .
T Consensus 173 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------------------------~~~~~d~e~v~avR~avG~ 219 (398)
T 2pp0_A 173 HTPLDQVLKNVVISRENGIGGIKLKVGQ---------------------------------PNCAEDIRRLTAVREALGD 219 (398)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEECCC---------------------------------SCHHHHHHHHHHHHHHHCS
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEecCC---------------------------------CCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999761 1111112222222222 3
Q ss_pred ceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 374 DVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 374 DVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
|+.|.+ |+|..-.+.|.+. +.++..++||. +||-| +|-++++.--++.++
T Consensus 220 d~~l~v----------Dan~~~~~~~ai~---~~~~l~~~~i~-~iEqP--~~~~d~~~~~~l~~~ 269 (398)
T 2pp0_A 220 EFPLMV----------DANQQWDRETAIR---MGRKMEQFNLI-WIEEP--LDAYDIEGHAQLAAA 269 (398)
T ss_dssp SSCEEE----------ECTTCSCHHHHHH---HHHHHGGGTCS-CEECC--SCTTCHHHHHHHHHH
T ss_pred CCeEEE----------ECCCCCCHHHHHH---HHHHHHHcCCc-eeeCC--CChhhHHHHHHHHhh
Confidence 555544 5554333445443 34445567886 68988 455677766566554
No 128
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=51.99 E-value=2.1e+02 Score=29.24 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=87.1
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcc-cchhhhHHHHhcCCCCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVG-TVPIYQALEKVDGIAENLS 298 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVG-TVPIYqAl~k~~g~~~~lt 298 (667)
++.++..+|. .++++=++.++.+.+.|-++|= +-.|+++....+.| +...=-+| .+|| ...++ ...|
T Consensus 134 ~vp~~~~~g~----~~~e~~~~~a~~~~~~Gf~~vK-ik~g~~~~~~~e~v-~avR~a~g~d~~l---~vDan---~~~~ 201 (397)
T 2qde_A 134 RIPLGLVLGA----GEPEAVAEEALAVLREGFHFVK-LKAGGPLKADIAMV-AEVRRAVGDDVDL---FIDIN---GAWT 201 (397)
T ss_dssp SEEBCEECCC----SCHHHHHHHHHHHHHHTCSCEE-EECCSCHHHHHHHH-HHHHHHHCTTSCE---EEECT---TCCC
T ss_pred CcceEEECCC----CCHHHHHHHHHHHHHhhhhhee-ecccCCHHHHHHHH-HHHHHhhCCCCEE---EEECC---CCCC
Confidence 3455555553 3567667888888999988874 66676654433222 11000011 2222 11122 3457
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeE
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVAL 377 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtl 377 (667)
.++..+.+..-.+.||+|+- -|+ ..+++.+-++.++.++-+
T Consensus 202 ~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~~~~~~~~l~~~~~iPI 243 (397)
T 2qde_A 202 YDQALTTIRALEKYNLSKIE--------------------------------------QPLPAWDLDGMARLRGKVATPI 243 (397)
T ss_dssp HHHHHHHHHHHGGGCCSCEE--------------------------------------CCSCTTCHHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHHHHhCCCCEEE--------------------------------------CCCChhhHHHHHHHHhhCCCCE
Confidence 78888887776677888752 111 135677777777777878
Q ss_pred eccCCCCCCCccCC-------------CcHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 378 SIGDGLRPGSIYDA-------------NDTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 378 SLGDGLRPG~iaDA-------------~D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
.+|..+.- ..|+ -|..++.-+...-++++.|.++|++||+-+
T Consensus 244 a~dE~~~~--~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 244 YADESAQE--LHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp EESTTCCS--HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEeCCcCC--HHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 77776642 1110 133343334444567788999999999864
No 129
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=51.59 E-value=23 Score=33.30 Aligned_cols=118 Identities=13% Similarity=0.046 Sum_probs=66.5
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCC----------CCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLST----------GRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRD 304 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLST----------Ggdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d 304 (667)
++++ .++.+.++|.|.|= |.. ..++.++|+. ++...+.+-.+=.|-... ..+. .+-..+.+.+
T Consensus 16 ~~~~---~l~~~~~~G~~~vE-l~~~~~~~~~~~~~~~~~~~~~~-l~~~gl~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 88 (286)
T 3dx5_A 16 SFTD---IVQFAYENGFEGIE-LWGTHAQNLYMQEYETTERELNC-LKDKTLEITMISDYLDIS-LSAD-FEKTIEKCEQ 88 (286)
T ss_dssp CHHH---HHHHHHHTTCCEEE-EEHHHHHHHHHHCHHHHHHHHHH-TGGGTCCEEEEECCCCCS-TTSC-HHHHHHHHHH
T ss_pred CHHH---HHHHHHHhCCCEEE-EcccccccccccCHHHHHHHHHH-HHHcCCeEEEEecCCCCC-Cchh-HHHHHHHHHH
Confidence 5554 45667789999884 422 2345566554 456667665542121000 0000 0112356777
Q ss_pred HHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccC
Q 005965 305 TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGD 381 (667)
Q Consensus 305 ~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGD 381 (667)
.|+--++-|+.++.+|+|...... .+ -..| .-+.+.+.++++++++|+|+|.|=.
T Consensus 89 ~i~~A~~lG~~~v~~~~g~~~~~~----------~~-----~~~~-------~~~~~~l~~l~~~a~~~Gv~l~lE~ 143 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSAD----------FS-----QQER-------QEYVNRIRMICELFAQHNMYVLLET 143 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGG----------SC-----HHHH-------HHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHhCCCEEEEcCCCCCccc----------Cc-----HHHH-------HHHHHHHHHHHHHHHHhCCEEEEec
Confidence 888888999999999998642110 00 0112 1245667777777777777777765
No 130
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=50.97 E-value=1.7e+02 Score=29.49 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=0.0
Q ss_pred chhhhHHHHhcCCCCC----------CCHHHHHHHHHHHHh-cCCCEEEEeccccccccccccCcccCccccccHHHHHH
Q 005965 281 VPIYQALEKVDGIAEN----------LSWEVFRDTLIEQAE-QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKW 349 (667)
Q Consensus 281 VPIYqAl~k~~g~~~~----------lt~e~~~d~ieeQAe-qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~W 349 (667)
+|+||-| +|...+ -+.+.+.+..++-.+ +|.+.+-||.|-.
T Consensus 118 ~Pl~~ll---Gg~~~~~v~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~------------------------- 169 (370)
T 1nu5_A 118 LSIADLI---GGTMRTSIPIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR------------------------- 169 (370)
T ss_dssp CBHHHHH---TCCSCSEEEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS-------------------------
T ss_pred CcHHHHh---CCCcCCceEeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC-------------------------
Q ss_pred HHHcCCcCchhhhHHHHHHHHhH------hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 350 CLAYHKENFAYEHWDEILDICNQ------YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 350 ml~h~~ENpLYe~FD~ileI~k~------YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
.+++.+++++. .|+.|.+ |+|-.-...|.+.+.+..+.. |+. +||-|
T Consensus 170 ------------~~~~~~e~v~avr~a~g~~~~l~v----------Dan~~~~~~~a~~~~~~l~~~---~i~-~iEqP- 222 (370)
T 1nu5_A 170 ------------TPAQDLEHIRSIVKAVGDRASVRV----------DVNQGWDEQTASIWIPRLEEA---GVE-LVEQP- 222 (370)
T ss_dssp ------------CHHHHHHHHHHHHHHHGGGCEEEE----------ECTTCCCHHHHHHHHHHHHHH---TCC-EEECC-
T ss_pred ------------ChHHHHHHHHHHHHhcCCCCEEEE----------ECCCCCCHHHHHHHHHHHHhc---Ccc-eEeCC-
Q ss_pred CCCCCchHHHHHHHHHh
Q 005965 424 HIPMHKIPENMQKQLEW 440 (667)
Q Consensus 424 HVPl~~I~~Nv~lqk~l 440 (667)
+|-++++.--++.++.
T Consensus 223 -~~~~~~~~~~~l~~~~ 238 (370)
T 1nu5_A 223 -VPRANFGALRRLTEQN 238 (370)
T ss_dssp -SCTTCHHHHHHHHHHC
T ss_pred -CCcccHHHHHHHHHhC
No 131
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=50.76 E-value=1e+02 Score=30.91 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.+.++|.+..++-.++|.+.+-||.|-
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~ 169 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGY 169 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 467889999998889999999999873
No 132
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=50.49 E-value=1.5e+02 Score=27.21 Aligned_cols=75 Identities=11% Similarity=-0.063 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHhHhceeE-eccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC--CCCCchHHHHHH
Q 005965 360 YEHWDEILDICNQYDVAL-SIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH--IPMHKIPENMQK 436 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtl-SLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH--VPl~~I~~Nv~l 436 (667)
.+++.+.+++|++.++.. .+.-|.++ . ++ ..++ -...|.+|.+.|.++||++-+|--++ -.++..++-.++
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~-~--~~--~~~~-~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l 157 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALVLCPLNDG-T--IV--PPEV-TVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQL 157 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSS-B--CC--CHHH-HHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCc-h--hH--HHHH-HHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHH
Confidence 467888888888887642 22222211 1 11 1122 13456777888888888888886432 345666666666
Q ss_pred HHHh
Q 005965 437 QLEW 440 (667)
Q Consensus 437 qk~l 440 (667)
-+++
T Consensus 158 ~~~v 161 (272)
T 2q02_A 158 IREA 161 (272)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5553
No 133
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=50.46 E-value=21 Score=36.38 Aligned_cols=61 Identities=33% Similarity=0.444 Sum_probs=40.0
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
++.|+++|||-|| |++ .++..+|+.+ +... +.+||. +-|. +|. +++.+-++.|||++.+=+
T Consensus 221 ~~eA~~aGaD~I~-ld~-~~~e~l~~~v-~~~~---~~~~I~-----ASGG---It~----~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 221 LDDALKAGADIIM-LDN-FNTDQMREAV-KRVN---GQARLE-----VSGN---VTA----ETLREFAETGVDFISVGA 281 (296)
T ss_dssp HHHHHHTTCSEEE-ESS-CCHHHHHHHH-HTTC---TTCCEE-----ECCC---SCH----HHHHHHHHTTCSEEECSH
T ss_pred HHHHHHcCCCEEE-ECC-CCHHHHHHHH-HHhC---CCCeEE-----EECC---CCH----HHHHHHHHcCCCEEEEeH
Confidence 4456789999998 777 4888888765 3322 345542 2233 354 556677889999997644
No 134
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=50.19 E-value=46 Score=31.87 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=64.3
Q ss_pred HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.++|..+|.+|.....- . . ...+-.=.+|+.+ ....++. .+..++.|++..++|-- +-|||.
T Consensus 28 ~~~GIt~VInl~~e~~~-----~-~-~~gi~y~~ipi~D------~~~~~l~~~~~~~~~fI~~~~~~~~~-VLVHC~-- 91 (211)
T 2g6z_A 28 ANLHITALLNVSRRTSE-----A-C-MTHLHYKWIPVED------SHTADISSHFQEAIDFIDCVREKGGK-VLVHSE-- 91 (211)
T ss_dssp HHHTCCEEEECSSCCCC-----T-T-CTTSEEEECCCCS------STTSCCGGGHHHHHHHHHHHHHTTCC-EEEEES--
T ss_pred HHCCCCEEEEcCCCCcc-----c-c-ccCCEEEEeeCCC------CCCCCHHHHHHHHHHHHHHHHhcCCe-EEEECC--
Confidence 47899999999875320 0 0 0111111223321 1122332 45667777776665543 348993
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHH
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQG 404 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LG 404 (667)
.| +||-|+++++|++....- .+++.++.+++. ||+..- +..++..|...-
T Consensus 92 -----------aG-~sRSgtvv~AYLm~~~g~-----s~~eAl~~vr~~----------Rp~i~p---N~~f~~qL~~~e 141 (211)
T 2g6z_A 92 -----------AG-ISRSPTICMAYLMKTKQF-----RLKEAFDYIKQR----------RSMVSP---NFGFMGQLLQYE 141 (211)
T ss_dssp -----------SS-SSHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH----------CTTCCC---CHHHHHHHHHHH
T ss_pred -----------CC-CCcHHHHHHHHHHHHcCC-----CHHHHHHHHHHH----------CCCcCC---CHHHHHHHHHHH
Confidence 25 499999999998876442 567777777765 776443 333555554443
No 135
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=50.13 E-value=2.2e+02 Score=28.97 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=44.2
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcH----------------HHHHHHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDT----------------AQFAELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~----------------AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
.+++.+-++.++.++-+.+|..+. +..|. ..+.-|...-+++..|.++|++||+ ||
T Consensus 229 ~d~~~~~~l~~~~~ipIa~dE~~~-----~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~---~~ 300 (377)
T 3my9_A 229 RHLDAMAGFAAALDTPILADESCF-----DAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYG---GT 300 (377)
T ss_dssp TCHHHHHHHHHHCSSCEEESTTCS-----SHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEEC---CE
T ss_pred cCHHHHHHHHHhCCCCEEECCccC-----CHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEec---CC
Confidence 357788888888888888876542 22221 2222233334567789999999986 66
Q ss_pred CCCCchHHHHHHHHHh
Q 005965 425 IPMHKIPENMQKQLEW 440 (667)
Q Consensus 425 VPl~~I~~Nv~lqk~l 440 (667)
+.-.-|-...-+|.-.
T Consensus 301 ~~es~i~~aa~~hlaa 316 (377)
T 3my9_A 301 LWEGGIALAAGTQLIA 316 (377)
T ss_dssp ECCSHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH
Confidence 6555565555555543
No 136
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=50.11 E-value=17 Score=34.15 Aligned_cols=73 Identities=15% Similarity=0.133 Sum_probs=48.4
Q ss_pred HHHHHHHHhCCcEeeecC------CCCChHHHHHHHHhcCCCCcccc-hhhhHHHHhcCCCCCCCH-HHHHHHHHHHHhc
Q 005965 241 YKVQWATMWGADTVMDLS------TGRHIHETREWILRNSAVPVGTV-PIYQALEKVDGIAENLSW-EVFRDTLIEQAEQ 312 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLS------TGgdi~~~R~~Il~nspvPVGTV-PIYqAl~k~~g~~~~lt~-e~~~d~ieeQAeq 312 (667)
+.++.|.++|.|.|- |. +. ++.++|+.+ +...+.+-.. | |.-+ .... +. +.+.+.|+.-++-
T Consensus 27 ~~l~~a~~~G~~~vE-l~~~~~~~~~-~~~~~~~~l-~~~gl~i~~~~~-~~~~----~~~~--~~~~~~~~~i~~A~~l 96 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVE-LREELFAGPP-DTEALTAAI-QLQGLECVFSSP-LELW----REDG--QLNPELEPTLRRAEAC 96 (264)
T ss_dssp GGHHHHHHHTCSEEE-EEGGGCSSCC-CHHHHHHHH-HHTTCEEEEEEE-EEEE----CTTS--SBCTTHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEE-EEHHhcCCCH-HHHHHHHHH-HHcCCEEEEecc-hhhc----CCch--hHHHHHHHHHHHHHHc
Confidence 457888999999983 32 23 788888765 5556654322 2 1110 1001 23 6788999999999
Q ss_pred CCCEEEEeccc
Q 005965 313 GVDYFTIHAGV 323 (667)
Q Consensus 313 GVDfmTIHaGv 323 (667)
|+.++.+|.|-
T Consensus 97 Ga~~v~~~~g~ 107 (264)
T 1yx1_A 97 GAGWLKVSLGL 107 (264)
T ss_dssp TCSEEEEEEEC
T ss_pred CCCEEEEecCC
Confidence 99999999874
No 137
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=49.68 E-value=7.4 Score=38.34 Aligned_cols=87 Identities=16% Similarity=0.092 Sum_probs=47.3
Q ss_pred eEeeccccCCCCCChHHHHHHHHHHHHhCCcEe-eecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhc-CCCCCCCH
Q 005965 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTV-MDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVD-GIAENLSW 299 (667)
Q Consensus 222 KVNANIGtS~~~~~ieeEveKl~~A~~~GADtV-MDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~-g~~~~lt~ 299 (667)
||..+| .|.+..++++|++. +.+.|||.+ .|.-.|.-. ..+..|- |+.+++.+.- .++.=|..
T Consensus 15 ~i~psi-la~D~~~l~~~i~~---~~~~gad~lhvDvmDG~fv----------pn~t~G~-~~v~~lr~~~~~DvhLMv~ 79 (237)
T 3cu2_A 15 KLSVGI-LSANWLQLNEEVTT---LLENQINVLHFDIADGQFS----------SLFTVGA-IGIKYFPTHCFKDVHLMVR 79 (237)
T ss_dssp CEEEEG-GGSCGGGHHHHHHH---HHHTTCCEEEEEEEBSSSS----------SCBCBCT-HHHHTSCTTSEEEEEEECS
T ss_pred eEEEee-eeCCcccHHHHHHH---HHHcCCCEEEEEEecCccc----------cchhhhH-HHHHHHhhhCCCCeEEEEE
Confidence 466666 35666688887654 557899975 554334211 0122332 3434433220 01111111
Q ss_pred HHHHHHHHHHHhcCCCEEEEecccc
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
+=...++.-++.|.|++|+|++-.
T Consensus 80 -~p~~~i~~~~~aGAd~itvH~ea~ 103 (237)
T 3cu2_A 80 -NQLEVAKAVVANGANLVTLQLEQY 103 (237)
T ss_dssp -CHHHHHHHHHHTTCSEEEEETTCT
T ss_pred -CHHHHHHHHHHcCCCEEEEecCCc
Confidence 113456666789999999999876
No 138
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=49.51 E-value=1e+02 Score=28.25 Aligned_cols=79 Identities=13% Similarity=0.048 Sum_probs=51.5
Q ss_pred hhhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCC-----CCCCCchH
Q 005965 359 AYEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPG-----HIPMHKIP 431 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPG-----HVPl~~I~ 431 (667)
..++|.+.+++|++.++. +.+.-|..|+.. ..+.++.. ...|.+|.+.|.++||.+.+|-=. .-.++.++
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~---~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~ 159 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVPAGE---DAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQY 159 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCCTTS---CHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHH
Confidence 357899999999999875 344334444321 22333333 346789999999999999999732 12356666
Q ss_pred HHHHHHHHh
Q 005965 432 ENMQKQLEW 440 (667)
Q Consensus 432 ~Nv~lqk~l 440 (667)
+-.++-+++
T Consensus 160 ~~~~l~~~~ 168 (260)
T 1k77_A 160 QALAIVEEV 168 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666665554
No 139
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=49.35 E-value=1e+02 Score=32.49 Aligned_cols=64 Identities=23% Similarity=0.243 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCcEee-ecCCCCC--hHHHHHHHHhcC-CCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 239 EVYKVQWATMWGADTVM-DLSTGRH--IHETREWILRNS-AVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 239 EveKl~~A~~~GADtVM-DLSTGgd--i~~~R~~Il~ns-pvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
-.+.+.+++++|+|.|. +..-|.. .-++=++|-+.. .+||.- |. -+|.++. +.-.+.|+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~-----------g~--~~t~e~a----~~l~~~G~ 300 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVA-----------GN--VATPEGT----EALIKAGA 300 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEE-----------EE--ECSHHHH----HHHHHTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEe-----------CC--cCCHHHH----HHHHHcCC
Confidence 35688999999999875 3433321 334445565665 355421 11 2455655 23346899
Q ss_pred CEEEE
Q 005965 315 DYFTI 319 (667)
Q Consensus 315 DfmTI 319 (667)
|++.+
T Consensus 301 d~I~v 305 (494)
T 1vrd_A 301 DAVKV 305 (494)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99988
No 140
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=49.32 E-value=76 Score=32.07 Aligned_cols=113 Identities=21% Similarity=0.219 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhC--CcEe-eecCCCCChH---HHHHHHHhcCC-CCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHH
Q 005965 237 EEEVYKVQWATMWG--ADTV-MDLSTGRHIH---ETREWILRNSA-VPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQ 309 (667)
Q Consensus 237 eeEveKl~~A~~~G--ADtV-MDLSTGgdi~---~~R~~Il~nsp-vPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQ 309 (667)
+++++.++.+++.| +|.| +|++.| +.. ++=+||.+..+ +||. .|.+ +|.++ .++-
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G-~~~~~~~~i~~lr~~~~~~~vi-----------~G~v--~s~e~----A~~a 166 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHG-HSNAVINMIQHIKKHLPESFVI-----------AGNV--GTPEA----VREL 166 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSC-CSHHHHHHHHHHHHHCTTSEEE-----------EEEE--CSHHH----HHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCC-CcHHHHHHHHHHHHhCCCCEEE-----------ECCc--CCHHH----HHHH
Confidence 45778888999999 8885 677654 322 34455666664 3333 1222 34443 3445
Q ss_pred HhcCCCEEEE--eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCC
Q 005965 310 AEQGVDYFTI--HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGS 387 (667)
Q Consensus 310 AeqGVDfmTI--HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~ 387 (667)
.+.|||++.+ |.|-.....+.. | ++++| | .++-|.++++..++.+-.-=|
T Consensus 167 ~~aGad~Ivvs~hgG~~~~~~~~~-----~-~g~~g-----~------------~~~~l~~v~~~~~ipVIa~GG----- 218 (336)
T 1ypf_A 167 ENAGADATKVGIGPGKVCITKIKT-----G-FGTGG-----W------------QLAALRWCAKAASKPIIADGG----- 218 (336)
T ss_dssp HHHTCSEEEECSSCSTTCHHHHHH-----S-CSSTT-----C------------HHHHHHHHHHTCSSCEEEESC-----
T ss_pred HHcCCCEEEEecCCCceeeccccc-----C-cCCch-----h------------HHHHHHHHHHHcCCcEEEeCC-----
Confidence 5789999999 765422111100 0 01111 2 366888888888877654333
Q ss_pred ccCCCcHH
Q 005965 388 IYDANDTA 395 (667)
Q Consensus 388 iaDA~D~A 395 (667)
|.+..|.+
T Consensus 219 I~~g~Dv~ 226 (336)
T 1ypf_A 219 IRTNGDVA 226 (336)
T ss_dssp CCSTHHHH
T ss_pred CCCHHHHH
Confidence 44555543
No 141
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=49.29 E-value=1.3e+02 Score=28.69 Aligned_cols=184 Identities=21% Similarity=0.195 Sum_probs=99.5
Q ss_pred HHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcC-CCCcccchhhhHHHHhcCCC--CCCCHHHHHHHHHHHHhcCCCEE
Q 005965 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNS-AVPVGTVPIYQALEKVDGIA--ENLSWEVFRDTLIEQAEQGVDYF 317 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~ns-pvPVGTVPIYqAl~k~~g~~--~~lt~e~~~d~ieeQAeqGVDfm 317 (667)
+=++++.++|++.|+= +. .+++.. ..--|.+|+.-.+. .+.. .+.+.+.+.+.+++-.+.|+|++
T Consensus 49 ~~~~~~~~~g~~~i~~--~~--------~~~~~~~~~~~~~~~~~v~~~--~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v 116 (273)
T 2qjg_A 49 KTVNDVAEGGANAVLL--HK--------GIVRHGHRGYGKDVGLIIHLS--GGTAISPNPLKKVIVTTVEEAIRMGADAV 116 (273)
T ss_dssp HHHHHHHHHTCSEEEE--CH--------HHHHSCCCSSSCCCEEEEECE--ECCTTSSSTTCCEECSCHHHHHHTTCSEE
T ss_pred HHHHHHHhcCCCEEEe--CH--------HHHHHHHHhhcCCCCEEEEEc--CCCcCCCCcccchHHHHHHHHHHcCCCEE
Confidence 3457888999999972 21 122211 11114455432111 1210 11111223566777788999999
Q ss_pred EEe--ccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCC-ccCCCcH
Q 005965 318 TIH--AGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGS-IYDANDT 394 (667)
Q Consensus 318 TIH--aGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~-iaDA~D~ 394 (667)
.++ .|-. ...-+++...++.++|++|++.+-+.-+.+ |. +.+..+.
T Consensus 117 ~~~l~~~~~------------------------------~~~~~~~~~~~v~~~~~~~g~~viv~~~~~-G~~l~~~~~~ 165 (273)
T 2qjg_A 117 SIHVNVGSD------------------------------EDWEAYRDLGMIAETCEYWGMPLIAMMYPR-GKHIQNERDP 165 (273)
T ss_dssp EEEEEETST------------------------------THHHHHHHHHHHHHHHHHHTCCEEEEEEEC-STTCSCTTCH
T ss_pred EEEEecCCC------------------------------CHHHHHHHHHHHHHHHHHcCCCEEEEeCCC-CcccCCCCCH
Confidence 554 3310 122346789999999999998776642211 11 1011121
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhh
Q 005965 395 AQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA 474 (667)
Q Consensus 395 AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~ 474 (667)
..+.+++++|.+.|+-...=+| |.+ + +.++.-++.+ +.|++..|=+-++ .+++.-..+-.++.
T Consensus 166 ------~~~~~~a~~a~~~Gad~i~~~~---~~~-~-~~l~~i~~~~-~ipvva~GGi~~~---~~~~~~~~~~~~~~-- 228 (273)
T 2qjg_A 166 ------ELVAHAARLGAELGADIVKTSY---TGD-I-DSFRDVVKGC-PAPVVVAGGPKTN---TDEEFLQMIKDAME-- 228 (273)
T ss_dssp ------HHHHHHHHHHHHTTCSEEEECC---CSS-H-HHHHHHHHHC-SSCEEEECCSCCS---SHHHHHHHHHHHHH--
T ss_pred ------hHHHHHHHHHHHcCCCEEEECC---CCC-H-HHHHHHHHhC-CCCEEEEeCCCCC---CHHHHHHHHHHHHH--
Confidence 2456778999999999776665 322 1 2333333344 5799988854321 26675555554442
Q ss_pred cccceeeecC
Q 005965 475 LGTALLCYVT 484 (667)
Q Consensus 475 ~GadfLCYVT 484 (667)
+||+-++..+
T Consensus 229 ~Ga~gv~vg~ 238 (273)
T 2qjg_A 229 AGAAGVAVGR 238 (273)
T ss_dssp HTCSEEECCH
T ss_pred cCCcEEEeeH
Confidence 5666666544
No 142
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=49.15 E-value=15 Score=38.00 Aligned_cols=62 Identities=23% Similarity=0.290 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEe
Q 005965 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIH 320 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIH 320 (667)
+-+..|+++|||-|| |-+ -+...+|+.+=... |.|.| ++-|.+ |. ++|.+-|+-||||+.+=
T Consensus 218 ~e~~eAl~aGaDiIm-LDn-~s~~~l~~av~~~~----~~v~l-----eaSGGI---t~----~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 218 SQVEESLSNNVDMIL-LDN-MSISEIKKAVDIVN----GKSVL-----EVSGCV---NI----RNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHHTTCSEEE-EES-CCHHHHHHHHHHHT----TSSEE-----EEESSC---CT----TTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHcCCCEEE-ECC-CCHHHHHHHHHhhc----CceEE-----EEECCC---CH----HHHHHHHHcCCCEEEeC
Confidence 455678889999998 433 35677776653322 23322 222332 22 67888899999999863
No 143
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=49.08 E-value=9.3 Score=39.21 Aligned_cols=61 Identities=21% Similarity=0.264 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
+.++.|+++|||-|| |-+ -+...+|+.+=... +.|+|-- .||. |. ++|.+-++-||||+.+
T Consensus 209 ~ea~eAl~aGaD~I~-LDn-~~~~~l~~av~~~~----~~v~iea----SGGI----t~----~~i~~~a~tGVD~Isv 269 (287)
T 3tqv_A 209 DELNQAIAAKADIVM-LDN-FSGEDIDIAVSIAR----GKVALEV----SGNI----DR----NSIVAIAKTGVDFISV 269 (287)
T ss_dssp HHHHHHHHTTCSEEE-EES-CCHHHHHHHHHHHT----TTCEEEE----ESSC----CT----TTHHHHHTTTCSEEEC
T ss_pred HHHHHHHHcCCCEEE-EcC-CCHHHHHHHHHhhc----CCceEEE----ECCC----CH----HHHHHHHHcCCCEEEE
Confidence 345678889999999 433 35566665543211 3344321 1332 32 6678889999999987
No 144
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=49.07 E-value=40 Score=30.32 Aligned_cols=115 Identities=14% Similarity=0.184 Sum_probs=64.6
Q ss_pred HHhCC--cEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecc
Q 005965 247 TMWGA--DTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 247 ~~~GA--DtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.+.|. .+|.+|+....-. ....+-.=.+|+.. ....++. .+.+++.|++..+.|- -+-|||.
T Consensus 51 ~~~gI~~~~Ii~l~~~~~~~-------~~~~~~~~~~p~~d------~~~~~l~~~~~~~~~~i~~~~~~~~-~VlVHC~ 116 (176)
T 3cm3_A 51 PSSEVKFKYVLNLTMDKYTL-------PNSNINIIHIPLVD------DTTTDISKYFDDVTAFLSKCDQRNE-PVLVHSA 116 (176)
T ss_dssp GGSSSCCSEEEECSSSCCCC-------TTSCCEEEECCCCC------SSSCCCGGGHHHHHHHHHHHHHHTC-CEEEECS
T ss_pred HHcCCCCCEEEEecCCCCCc-------CCCCCEEEEEECCC------CCcccHHHHHHHHHHHHHHHHHCCC-cEEEECC
Confidence 67899 9999998764311 01112122233321 1122332 3566677766655543 3569993
Q ss_pred ccccccccccCcccCccccccHHHHHHHHHcC-CcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHH
Q 005965 323 VLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH-KENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAEL 400 (667)
Q Consensus 323 v~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~-~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL 400 (667)
+ | +||-|++.+.|++... ..+| .-.+++.++..++. ||+..-...=..|+.+.
T Consensus 117 ---------a----G-~~RSg~~v~aylm~~~~~~~~-~v~~~~A~~~vr~~----------R~~~~pn~~f~~qL~~~ 170 (176)
T 3cm3_A 117 ---------A----G-VNRSGAMILAYLMSKNKESLP-MLYFLYVYHSMRDL----------RGAFVENPSFKRQIIEK 170 (176)
T ss_dssp ---------S----S-SSHHHHHHHHHHHHHCCSSCH-HHHHHHHHHHHHHH----------HSCCCCCHHHHHHHHHH
T ss_pred ---------c----C-CCHHHHHHHHHHHHHhCCCCc-cccHHHHHHHHHHH----------CCCCCCCHHHHHHHHHH
Confidence 2 3 5999999999988764 3344 23356666666654 77766544333344433
No 145
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=49.05 E-value=22 Score=35.27 Aligned_cols=37 Identities=24% Similarity=0.279 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCcEeeecC--------CCC-----ChHHHHHHHHhcCCCCc
Q 005965 241 YKVQWATMWGADTVMDLS--------TGR-----HIHETREWILRNSAVPV 278 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLS--------TGg-----di~~~R~~Il~nspvPV 278 (667)
+-++.+.++|||.|+.|- .+| +.+.++ .|.+.+.+|+
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~-~I~~~~~iPv 81 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVE-EVMNAVSIPV 81 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHH-HHHHHCSSCE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHH-HHHHhCCCCE
Confidence 456778889999998773 233 565555 4556667775
No 146
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=48.90 E-value=65 Score=29.64 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=49.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 294 AENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 294 ~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+...+.+++.+.+++-.+.|+|++-+... . . ..++.|.+++++|
T Consensus 13 i~~~d~~~~~~~~~~~~~~G~~~i~l~~~---~---------------~------------------~~~~~i~~i~~~~ 56 (212)
T 2v82_A 13 LRGITPDEALAHVGAVIDAGFDAVEIPLN---S---------------P------------------QWEQSIPAIVDAY 56 (212)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETT---S---------------T------------------THHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHCCCCEEEEeCC---C---------------h------------------hHHHHHHHHHHhC
Confidence 44567889999999989999998755322 0 0 1136777889999
Q ss_pred ceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 374 DVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 374 DVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
++.|-+|+| .+.| . +-++.|.+.|+....
T Consensus 57 ~~~l~vg~g----~~~~---~----------~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 57 GDKALIGAG----TVLK---P----------EQVDALARMGCQLIV 85 (212)
T ss_dssp TTTSEEEEE----CCCS---H----------HHHHHHHHTTCCEEE
T ss_pred CCCeEEEec----cccC---H----------HHHHHHHHcCCCEEE
Confidence 987777764 2333 1 235677788888775
No 147
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=48.45 E-value=1.2e+02 Score=28.26 Aligned_cols=79 Identities=10% Similarity=0.044 Sum_probs=49.1
Q ss_pred hhhhHHHHHHHHhHhceeEe-ccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHH
Q 005965 359 AYEHWDEILDICNQYDVALS-IGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQK 436 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVtlS-LGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~l 436 (667)
..++|.+.+++|++.++..= +.-|..+. +..++.+++.+ ..|.+|.+.|.++||++-+|--..-.++..++-.++
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~---~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l 158 (286)
T 3dx5_A 82 TIEKCEQLAILANWFKTNKIRTFAGQKGS---ADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSCSSCG---GGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCCCCc---ccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHH
Confidence 36789999999999987433 33333322 12334445444 458899999999999999995211223444444444
Q ss_pred HHHh
Q 005965 437 QLEW 440 (667)
Q Consensus 437 qk~l 440 (667)
-+++
T Consensus 159 ~~~~ 162 (286)
T 3dx5_A 159 LGEV 162 (286)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 4443
No 148
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=48.28 E-value=13 Score=35.76 Aligned_cols=87 Identities=23% Similarity=0.197 Sum_probs=50.3
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHH---HHhcCCCCcccch-hhhHHHHhc
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREW---ILRNSAVPVGTVP-IYQALEKVD 291 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~---Il~nspvPVGTVP-IYqAl~k~~ 291 (667)
+|+.+-+|-.-.....+..+.-++.|++.|||.| +++|. .++-+.+.+. +.+.++ |+ +|= ||+.
T Consensus 54 v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv-~vKvi~e~----- 126 (225)
T 1mzh_A 54 VKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SA-VHKVIVET----- 126 (225)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TS-EEEEECCG-----
T ss_pred CceeeEecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-Cc-eEEEEEeC-----
Confidence 4555555422222345556666789999999998 24433 1244444433 333343 32 110 1221
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEE
Q 005965 292 GIAENLSWEVFRDTLIEQAEQGVDYF 317 (667)
Q Consensus 292 g~~~~lt~e~~~d~ieeQAeqGVDfm 317 (667)
.++|.+++.+..+.-.+.|+||+
T Consensus 127 ---~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 127 ---PYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp ---GGCCHHHHHHHHHHHHHHTCSEE
T ss_pred ---CCCCHHHHHHHHHHHHHhCCCEE
Confidence 24788888888888888899999
No 149
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=47.86 E-value=1.5e+02 Score=30.38 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.+.+.|.+..++-.++|.+.+=||.|
T Consensus 160 ~~~~e~~~~~a~~~~~~Gf~~vKik~g 186 (393)
T 2og9_A 160 HTPIDQLMVNASASIERGIGGIKLKVG 186 (393)
T ss_dssp TSCHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 458899999999999999999999977
No 150
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=47.76 E-value=1.2e+02 Score=30.38 Aligned_cols=175 Identities=15% Similarity=0.121 Sum_probs=89.7
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHH---hcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWIL---RNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il---~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
+..+.++|+--++-. ..-+.++++++|- +.+..|+| |.++-. +-+ +-+.++.-.+.|+|++.+
T Consensus 29 a~av~~aG~lG~i~~-~~~~~~~~~~~i~~i~~~~~~p~g-vnl~~~---------~~~---~~~~~~~a~~~g~d~V~~ 94 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGG-GNAPKEVVKANIDKIKSLTDKPFG-VNIMLL---------SPF---VEDIVDLVIEEGVKVVTT 94 (332)
T ss_dssp HHHHHHHTSBEEEEC-TTCCHHHHHHHHHHHHHHCCSCEE-EEECTT---------STT---HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCCCcEEeCC-CCCCHHHHHHHHHHHHHhcCCCEE-EEecCC---------CCC---HHHHHHHHHHCCCCEEEE
Confidence 455778898555533 2346677666543 22345555 222210 112 334555556789999999
Q ss_pred eccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHH
Q 005965 320 HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE 399 (667)
Q Consensus 320 HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~E 399 (667)
|+|.. .++++-++++++.+.+- + ++
T Consensus 95 ~~g~p---------------------------------------~~~i~~l~~~g~~v~~~-------v-~~-------- 119 (332)
T 2z6i_A 95 GAGNP---------------------------------------SKYMERFHEAGIIVIPV-------V-PS-------- 119 (332)
T ss_dssp CSSCG---------------------------------------GGTHHHHHHTTCEEEEE-------E-SS--------
T ss_pred CCCCh---------------------------------------HHHHHHHHHcCCeEEEE-------e-CC--------
Confidence 99841 12456667777655421 1 11
Q ss_pred HHHHHHHHHHHHhcCCe-EEeeCC---CCCC-CCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhh
Q 005965 400 LLTQGELTRRAWDKDVQ-VMNEGP---GHIP-MHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA 474 (667)
Q Consensus 400 L~~LGEL~krA~e~gVQ-VMIEGP---GHVP-l~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~ 474 (667)
-+.++++.+.|+. +.+.|+ ||.. ...+ .-+..-++.+ +-|+..-|=+.| .+.+..++-
T Consensus 120 ----~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~-~ll~~i~~~~-~iPViaaGGI~~-----~~~~~~al~------ 182 (332)
T 2z6i_A 120 ----VALAKRMEKIGADAVIAEGMEAGGHIGKLTTM-TLVRQVATAI-SIPVIAAGGIAD-----GEGAAAGFM------ 182 (332)
T ss_dssp ----HHHHHHHHHTTCSCEEEECTTSSEECCSSCHH-HHHHHHHHHC-SSCEEEESSCCS-----HHHHHHHHH------
T ss_pred ----HHHHHHHHHcCCCEEEEECCCCCCCCCCccHH-HHHHHHHHhc-CCCEEEECCCCC-----HHHHHHHHH------
Confidence 2345667788886 455674 6642 1111 1222222223 467776665432 144555443
Q ss_pred cccceeeecCcccc-cCCCChhHHHHHHHH
Q 005965 475 LGTALLCYVTPKEH-LGLPNRDDVKAGVIA 503 (667)
Q Consensus 475 ~GadfLCYVTPaEH-LgLP~~eDVreGVIA 503 (667)
.|||++..-|+--- ...|..+.+|+-++.
T Consensus 183 ~GAdgV~vGs~~l~~~e~~~~~~~k~~~~~ 212 (332)
T 2z6i_A 183 LGAEAVQVGTRFVVAKESNAHPNYKEKILK 212 (332)
T ss_dssp TTCSEEEECHHHHTBTTCCSCHHHHHHHHH
T ss_pred cCCCEEEecHHHhcCccccccHHHHHHHHh
Confidence 46666655443211 123556666665543
No 151
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=47.76 E-value=2.4e+02 Score=28.55 Aligned_cols=182 Identities=11% Similarity=0.034 Sum_probs=102.1
Q ss_pred HHHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHH
Q 005965 165 YYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244 (667)
Q Consensus 165 ~~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~ 244 (667)
..|+.|+-.--..-.|+..|++.-.+. -|. .-++.+++.+|.. ..++++=.+.++
T Consensus 101 ~~a~~aid~AlwDl~~k~~g~Pl~~ll----Gg~-------------------~~~v~~y~~~~~~--~~~~e~~~~~a~ 155 (371)
T 2ovl_A 101 TSAISAVDIALWDLKGIRARTPLWKLF----GGY-------------------DPVVPVYAGGIDL--ELPVADLKTQAD 155 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSBHHHHT----TCC-------------------CSEEEEEEECCBT--TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHh----CCC-------------------CCCeeEEEeCCCc--CCCHHHHHHHHH
Confidence 345555544444556677776654332 222 1234455543321 236777778888
Q ss_pred HHHHhCCcEeeecCCCC-ChHHHHHHH---HhcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 245 WATMWGADTVMDLSTGR-HIHETREWI---LRNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 245 ~A~~~GADtVMDLSTGg-di~~~R~~I---l~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
.+.+.|-++|= +-.|. ++....+.| -+.. | .+||. .+++ ...|.++..+.+++-.+.||+|+-
T Consensus 156 ~~~~~Gf~~iK-ik~g~~~~~~~~e~v~avr~a~----G~d~~l~---vDan---~~~~~~~a~~~~~~l~~~~i~~iE- 223 (371)
T 2ovl_A 156 RFLAGGFRAIK-MKVGRPDLKEDVDRVSALREHL----GDSFPLM---VDAN---MKWTVDGAIRAARALAPFDLHWIE- 223 (371)
T ss_dssp HHHHTTCSCEE-EECCCSSHHHHHHHHHHHHHHH----CTTSCEE---EECT---TCSCHHHHHHHHHHHGGGCCSEEE-
T ss_pred HHHHcCCCEEE-ECCCCCCHHHHHHHHHHHHHHh----CCCCeEE---EECC---CCCCHHHHHHHHHHHHhcCCCEEE-
Confidence 89999988874 65564 544322221 1111 1 12221 1222 235778888888777778999862
Q ss_pred eccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCCC---------cc
Q 005965 320 HAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPGS---------IY 389 (667)
Q Consensus 320 HaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~---------ia 389 (667)
-|+ ..+++.+-++.++.++-+.+|..++--. -+
T Consensus 224 -------------------------------------qP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 266 (371)
T 2ovl_A 224 -------------------------------------EPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL 266 (371)
T ss_dssp -------------------------------------CCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred -------------------------------------CCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 222 1357777788888888888887654100 00
Q ss_pred CC--CcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 390 DA--NDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 390 DA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
|. -|..++.-+-..-++++.|.++|++||+-
T Consensus 267 d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 267 TLPEPDVSNIGGYTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp SEECCCTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEeeCccccCCHHHHHHHHHHHHHcCCeEccc
Confidence 10 12223233344457788899999999994
No 152
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=47.64 E-value=2.3e+02 Score=28.31 Aligned_cols=149 Identities=10% Similarity=0.109 Sum_probs=86.2
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcccchhhhHHHHhcCCCCCCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVGTVPIYQALEKVDGIAENLS 298 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVGTVPIYqAl~k~~g~~~~lt 298 (667)
+.+++.+|. .++++-++.++.+.+.|-++|= +-.|.++..-.+.|- |..+ ..++|. + .++ ...|
T Consensus 129 v~~~~~~~~----~~~~~~~~~a~~~~~~Gf~~iK-ik~g~~~~~d~~~v~avr~~g---~~~~l~--v-Dan---~~~~ 194 (345)
T 2zad_A 129 IETDKTVGI----DTVENRVKEAKKIFEEGFRVIK-IKVGENLKEDIEAVEEIAKVT---RGAKYI--V-DAN---MGYT 194 (345)
T ss_dssp EEBCEEECS----CCHHHHHHHHHHHHHTTCSEEE-EECCSCHHHHHHHHHHHHHHS---TTCEEE--E-ECT---TCSC
T ss_pred eeeeEEecC----CCHHHHHHHHHHHHHcCcCEEE-EeecCCHHHHHHHHHHHHhhC---CCCeEE--E-ECC---CCCC
Confidence 444444442 2567767888888999998885 666665443322221 1111 122220 1 112 2357
Q ss_pred HHHHHHHHHHHHhcCCC--EEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhce
Q 005965 299 WEVFRDTLIEQAEQGVD--YFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDV 375 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVD--fmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDV 375 (667)
.++..+.+++-.+.||+ |+- -|+ ..+++.+-++.++.++
T Consensus 195 ~~~a~~~~~~l~~~~i~~~~iE--------------------------------------~P~~~~~~~~~~~l~~~~~i 236 (345)
T 2zad_A 195 QKEAVEFARAVYQKGIDIAVYE--------------------------------------QPVRREDIEGLKFVRFHSPF 236 (345)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEE--------------------------------------CCSCTTCHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhcCCCeeeee--------------------------------------CCCCcccHHHHHHHHHhCCC
Confidence 77777777766667888 642 222 2456777777777778
Q ss_pred eEeccCCCCC----------CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 376 ALSIGDGLRP----------GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 376 tlSLGDGLRP----------G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
-+.+|..+.- |+ +|. -|..+ .-|...-++++.|.++|++||+-+.+
T Consensus 237 pia~dE~~~~~~~~~~~i~~~~-~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~~ 294 (345)
T 2zad_A 237 PVAADESARTKFDVMRLVKEEA-VDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCMG 294 (345)
T ss_dssp CEEESTTCCSHHHHHHHHHHTC-CSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CEEEeCCcCCHHHHHHHHHhCC-CCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecCc
Confidence 7777766541 00 111 13344 45555567788899999999985543
No 153
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=47.57 E-value=22 Score=34.65 Aligned_cols=110 Identities=8% Similarity=0.024 Sum_probs=68.0
Q ss_pred HHHHHHHHhCCcEeeecCCC---------C--------ChHHHHHHHHhcCCCCcc--cchhhhHHHHhcCCCCCCCHHH
Q 005965 241 YKVQWATMWGADTVMDLSTG---------R--------HIHETREWILRNSAVPVG--TVPIYQALEKVDGIAENLSWEV 301 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTG---------g--------di~~~R~~Il~nspvPVG--TVPIYqAl~k~~g~~~~lt~e~ 301 (667)
+.++.|.++|.|.|= |... . ++.++|+.+ +...+.+- .+|.+ +........+-..+.
T Consensus 40 ~~l~~aa~~G~~~VE-l~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l-~~~GL~i~~~~~~~~--~~~~~~~~~~~~~~~ 115 (305)
T 3obe_A 40 NGLNRLAKAGYTDLE-IFGYREDTGKFGDYNPKNTTFIASKDYKKMV-DDAGLRISSSHLTPS--LREYTKENMPKFDEF 115 (305)
T ss_dssp HHHHHHHHHTCCEEE-ECCBCTTTCCBCCC----CCCBCHHHHHHHH-HHTTCEEEEEBCCCS--CCCCCGGGHHHHHHH
T ss_pred HHHHHHHHcCCCEEE-ecccccccccccCcCcccccccCHHHHHHHH-HHCCCeEEEeecccc--ccccchhhHHHHHHH
Confidence 467889999999983 4432 2 778888766 55566543 22321 000000000112456
Q ss_pred HHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 302 FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 302 ~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
+.+.|+--++-|+.++.+| |.. .+ . --..| .-+.+.|.++++++++|+|+|.|
T Consensus 116 ~~~~i~~A~~lG~~~v~~~-~~~--------~~--------~-~~~~~-------~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 116 WKKATDIHAELGVSCMVQP-SLP--------RI--------E-NEDDA-------KVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp HHHHHHHHHHHTCSEEEEC-CCC--------CC--------S-SHHHH-------HHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeC-CCC--------CC--------C-CHHHH-------HHHHHHHHHHHHHHHHcCCEEEE
Confidence 7788888888999999986 321 01 0 11234 12468899999999999999987
No 154
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=47.32 E-value=1.3e+02 Score=28.50 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=67.7
Q ss_pred HHHhCCcEeeecCCCC-ChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCC--CHHHHHHHHHHHH-hcCCCEEEEec
Q 005965 246 ATMWGADTVMDLSTGR-HIHETREWILRNSAVPVGTVPIYQALEKVDGIAENL--SWEVFRDTLIEQA-EQGVDYFTIHA 321 (667)
Q Consensus 246 A~~~GADtVMDLSTGg-di~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l--t~e~~~d~ieeQA-eqGVDfmTIHa 321 (667)
-.+.|..+|.+|.... ++..--+ ..+...+-.=.+|+.. ....++ .++..++.|++.. ..|- -+-|||
T Consensus 75 L~~~gIt~VInl~~~~~~~~~~~~-~~~~~~i~y~~ipi~D------~~~~~l~~~~~~~~~fI~~~l~~~~~-~VLVHC 146 (219)
T 2y96_A 75 LQKAGFTHVLNAAHGRWNVDTGPD-YYRDMDIQYHGVEADD------LPTFDLSVFFYPAAAFIDRALSDDHS-KILVHC 146 (219)
T ss_dssp HHHTTCCEEEETTBSTTSBCCHHH-HTTTSCCEEEECCCCS------STTSCGGGGHHHHHHHHHHHHTSTTC-CEEEEC
T ss_pred HHHCCCeEEEECCCCccccccchh-hhcccCcEEEEEECCC------CCchhHHHHHHHHHHHHHHHHHccCC-eEEEEC
Confidence 3479999999998653 1111111 1112222222233321 111222 2345556666655 3332 356899
Q ss_pred cccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHH
Q 005965 322 GVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELL 401 (667)
Q Consensus 322 Gv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~ 401 (667)
.- | +||-|+++++|++....- .+++.++..++ .|| | . -...++..|.
T Consensus 147 ~a-------------G-~sRS~tvv~aYLm~~~~~-----s~~eAl~~vr~----------~R~--i-~-pn~~f~~qL~ 193 (219)
T 2y96_A 147 VM-------------G-RSRSATLVLAYLMIHKDM-----TLVDAIQQVAK----------NRC--V-L-PNRGFLKQLR 193 (219)
T ss_dssp SS-------------S-SSHHHHHHHHHHHHHSCC-----CHHHHHHHHHT----------TSC--C-C-CCHHHHHHHH
T ss_pred CC-------------C-CCHHHHHHHHHHHHHcCC-----CHHHHHHHHHH----------hCC--C-C-CCHHHHHHHH
Confidence 52 5 599999999998876542 56788888776 375 3 2 3344666666
Q ss_pred HHHHHHHH
Q 005965 402 TQGELTRR 409 (667)
Q Consensus 402 ~LGEL~kr 409 (667)
.+-+....
T Consensus 194 ~~e~~L~~ 201 (219)
T 2y96_A 194 ELDKQLVQ 201 (219)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66554443
No 155
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=46.85 E-value=14 Score=42.46 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=61.5
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc----cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEI 366 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~i 366 (667)
||+.--|+. .++.+++.-...|...+.||-|. .-+.++++..-+-+|.++||++| -..+.+| .+.++++
T Consensus 409 GGdapGmNa-aIravv~~~~~~g~~v~Gi~~G~~GL~~~~~~~l~~~~v~~i~~~GGt~L-----GTsR~~~-~~~~~~~ 481 (762)
T 3o8l_A 409 GAPAAGMNA-AVRSTVRIGLIQGNRVLVVHDGFEGPAKGQIEEAGWSYVGGWTGQGGSKL-----GSKRTLP-KKSFEQI 481 (762)
T ss_dssp SSCCTTHHH-HHHHHHHHHHHHTCEEEEESSTTHHHHHTCEEECCTTTTSSCTTCCSCSS-----CEECCCS-GGGHHHH
T ss_pred CCCcHHHHH-HHHHHHHHHHHCCCEEEEEeccccccccCCEEECCHHHhhhHHhCCCcee-----ecCCCCc-HHHHHHH
Confidence 566666654 45666666667899999999987 44566777788999999999976 4556677 5899999
Q ss_pred HHHHhHhcee
Q 005965 367 LDICNQYDVA 376 (667)
Q Consensus 367 leI~k~YDVt 376 (667)
.+.+++|++.
T Consensus 482 ~~~l~~~~Id 491 (762)
T 3o8l_A 482 SANITKFNIQ 491 (762)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHcCCC
Confidence 9999999864
No 156
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=46.57 E-value=18 Score=35.59 Aligned_cols=79 Identities=18% Similarity=0.190 Sum_probs=47.7
Q ss_pred CChHHHHHHHHHHHHhCCcE--eeecCC-----------CCChHHH---HHHHHhcCCCCcccchhhhHHHHhcCCCCCC
Q 005965 234 SSIEEEVYKVQWATMWGADT--VMDLST-----------GRHIHET---REWILRNSAVPVGTVPIYQALEKVDGIAENL 297 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADt--VMDLST-----------Ggdi~~~---R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l 297 (667)
.++++=.+-++.+.++|+|. .++|.- |+|.+.+ =++|-+.+++||. .|.. .++
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~--------vK~~---~~~ 171 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFG--------VKMP---PYF 171 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEE--------EEEC---CCC
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEE--------EEEC---CCC
Confidence 35666666677788899994 555532 2344432 2233333334432 1221 235
Q ss_pred CHHHHHHHHHHHHhcC-CCEEEEeccc
Q 005965 298 SWEVFRDTLIEQAEQG-VDYFTIHAGV 323 (667)
Q Consensus 298 t~e~~~d~ieeQAeqG-VDfmTIHaGv 323 (667)
+.+++.+..+.-.+.| ||++++|...
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 7778777777778899 9999999865
No 157
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=46.55 E-value=16 Score=38.69 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=36.2
Q ss_pred EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 377 LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 377 lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
.|.-...||-||.-..+.+|+++.+ +.|+++|++|-|.|-||
T Consensus 45 w~~~~~~~P~~vv~p~~~~~v~~~v------~~a~~~~~~~~~r~gGh 86 (500)
T 3tsh_A 45 WSSPDNVKPLYIITPTQVSHIQSAV------VCGRRHSVRIRVRSGGH 86 (500)
T ss_dssp TTSTTSCCCSEEECCSSHHHHHHHH------HHHHHTTCEEEEESSCC
T ss_pred ccCCCCCCceEEEEcCCHHHHHHHH------HHHHHCCCcEEEEcCCc
Confidence 3444568999999999999998764 67899999999999999
No 158
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=46.28 E-value=2.5e+02 Score=28.37 Aligned_cols=150 Identities=12% Similarity=0.128 Sum_probs=77.9
Q ss_pred ChHHHHHHHHHHHHhCCcEee-ecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 235 SIEEEVYKVQWATMWGADTVM-DLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVM-DLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
+.++-++.++.+.+.|-++|= .++...|+..+| .|-+.. | .++| ...+++ ..|.++ .+.+++-.+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~-avr~a~--~--~~~l---~vDan~---~~~~~~-~~~~~~l~~~~ 215 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVR-ATREAF--P--DIRL---TVDANS---AYTLAD-AGRLRQLDEYD 215 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHH-HHHHHC--T--TSCE---EEECTT---CCCGGG-HHHHHTTGGGC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHHH-HHHHHc--C--CCeE---EEeCCC---CCCHHH-HHHHHHHHhCC
Confidence 677777888888899988762 233334554432 111111 1 2222 011122 235555 66666655567
Q ss_pred CCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCCCccCC-
Q 005965 314 VDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPGSIYDA- 391 (667)
Q Consensus 314 VDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA- 391 (667)
++|+- -|+ -.+++.+-++.++.++-+.+|+.+.- ..|.
T Consensus 216 i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~--~~~~~ 255 (375)
T 1r0m_A 216 LTYIE--------------------------------------QPLAWDDLVDHAELARRIRTPLCLDESVAS--ASDAR 255 (375)
T ss_dssp CSCEE--------------------------------------CCSCTTCSHHHHHHHHHCSSCEEESTTCCS--HHHHH
T ss_pred CcEEE--------------------------------------CCCCcccHHHHHHHHHhCCCCEEecCccCC--HHHHH
Confidence 77763 222 13455555666666666666555421 0000
Q ss_pred ------------CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 392 ------------NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 392 ------------~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
-|..++.-+...-++++.|+++|+++|+ ||+.-.-|-...-+|.-
T Consensus 256 ~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~---~~~~es~i~~aa~~hla 312 (375)
T 1r0m_A 256 KALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC---GGMLESGIGRAHNIHLS 312 (375)
T ss_dssp HHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE---CCCCCCHHHHHHHHHHT
T ss_pred HHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe---cCccccHHHHHHHHHHH
Confidence 0111212223334677789999999988 77766666554444443
No 159
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=45.86 E-value=2.9e+02 Score=29.36 Aligned_cols=165 Identities=14% Similarity=0.140 Sum_probs=92.8
Q ss_pred HHHHHhCCcEee----ec-CCCCCh-----------HHHHHHHHhcCCCCc--ccchhhhHHHHhcCCCCCCCH------
Q 005965 244 QWATMWGADTVM----DL-STGRHI-----------HETREWILRNSAVPV--GTVPIYQALEKVDGIAENLSW------ 299 (667)
Q Consensus 244 ~~A~~~GADtVM----DL-STGgdi-----------~~~R~~Il~nspvPV--GTVPIYqAl~k~~g~~~~lt~------ 299 (667)
..+.++|.|.|= |+ .-+.++ .++|+. ++.+.+.+ +|..++.--.-..|.+..-+.
T Consensus 87 e~~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~-l~~~GL~~~~~t~nl~~h~~y~~G~~~spd~evR~~a 165 (438)
T 1a0c_A 87 EFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDY-LKTSKTKVLWGTANLFSNPRFVHGASTSCNADVFAYS 165 (438)
T ss_dssp HHHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHH-HTTCSCEEEEEECCCSSSGGGTTCSTTCSCHHHHHHH
T ss_pred HHHHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHH-HHHhCCceEeccccccCCCccccCCCCCCCHHHHHHH
Confidence 448899999992 12 222222 456665 77887766 553332200001233322333
Q ss_pred -HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce--e
Q 005965 300 -EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV--A 376 (667)
Q Consensus 300 -e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV--t 376 (667)
+.+.+.|+.-++-|+..+++|+|..-...+ .+...-..| .=+-+.+.++++.+++++| +
T Consensus 166 i~~lk~aId~A~~LGa~~vv~~~G~~G~~~~-----------~~~~~~~~~-------~~~~e~L~~~~~~A~~~Gv~v~ 227 (438)
T 1a0c_A 166 AAQVKKALEITKELGGENYVFWGGREGYETL-----------LNTDMEFEL-------DNFARFLHMAVDYAKEIGFEGQ 227 (438)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCTTSEESCG-----------GGCCHHHHH-------HHHHHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCccccC-----------CCCCHHHHH-------HHHHHHHHHHHHHHHhcCCCcE
Confidence 577788888899999999999995100000 011121233 1356788999999999965 9
Q ss_pred EeccCC---CCCCCccCCCcHHHHHHHHHHHHHHHHHHhcC-CeEEeeCCCCCCCC--chHHHHHH
Q 005965 377 LSIGDG---LRPGSIYDANDTAQFAELLTQGELTRRAWDKD-VQVMNEGPGHIPMH--KIPENMQK 436 (667)
Q Consensus 377 lSLGDG---LRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~g-VQVMIEGPGHVPl~--~I~~Nv~l 436 (667)
|.|=.= =|++ .--++.+|..+|+ ++--..+ |.|++. .||+-+. .+...++.
T Consensus 228 l~IEp~p~~~~~~--~~~~t~~~al~li------~~vg~pn~vgv~lD-t~H~~~~g~di~~~i~~ 284 (438)
T 1a0c_A 228 FLIEPKPKEPTKH--QYDFDVANVLAFL------RKYDLDKYFKVNIE-ANHATLAFHDFQHELRY 284 (438)
T ss_dssp EEECCCSCSSSSE--ESSCSHHHHHHHH------HHTTCTTTEEEEEE-HHHHHHTTCCHHHHHHH
T ss_pred EEEeeCCCCCCCC--cccCCHHHHHHHH------HHcCCCCeEEEEEE-hhhhhhcCCCHHHHHHH
Confidence 999873 1223 2345555555442 2222233 888886 5888554 35554544
No 160
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=45.73 E-value=2.3e+02 Score=28.90 Aligned_cols=148 Identities=11% Similarity=0.047 Sum_probs=80.3
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCC-ChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGR-HIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAE 295 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGg-di~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~ 295 (667)
++.+++.+|.. ..++++=.+.++.+.+.|-++|- +-.|. ++....+.|- |.. +| .+||. ..++ .
T Consensus 132 ~vp~y~~~~~~--~~~~~~~~~~a~~~~~~Gf~~vK-ik~g~~~~~~~~e~v~avR~a---~G~~~~l~---vDan---~ 199 (389)
T 2oz8_A 132 RVKAYASGLDF--HLDDDAFVSLFSHAASIGYSAFK-IKVGHRDFDRDLRRLELLKTC---VPAGSKVM---IDPN---E 199 (389)
T ss_dssp EEEEEEECCBT--TCCHHHHHHHHHHHHHTTCCEEE-EECCCSSHHHHHHHHHHHHTT---SCTTCEEE---EECT---T
T ss_pred ceEEEEeCCCc--CCCHHHHHHHHHHHHHhCCCEEE-EccCCCCHHHHHHHHHHHHHh---hCCCCeEE---EECC---C
Confidence 34555554432 23677778888889999998874 65564 5554433321 221 12 23332 1223 2
Q ss_pred CCCHHHHHHHHHHHHh--cCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhH
Q 005965 296 NLSWEVFRDTLIEQAE--QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQ 372 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAe--qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~ 372 (667)
..|.++..+.+.+-.+ .|++|+- -|+ ..+++.+-++.++
T Consensus 200 ~~~~~~a~~~~~~l~~~g~~i~~iE--------------------------------------qP~~~~~~~~~~~l~~~ 241 (389)
T 2oz8_A 200 AWTSKEALTKLVAIREAGHDLLWVE--------------------------------------DPILRHDHDGLRTLRHA 241 (389)
T ss_dssp CBCHHHHHHHHHHHHHTTCCCSEEE--------------------------------------SCBCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCceEEe--------------------------------------CCCCCcCHHHHHHHHhh
Confidence 3577888777766555 5676651 121 1245566666666
Q ss_pred h-ceeEeccCCCCCCCccCC--------CcHHHH-HHHHHHHHHHHHHHhcCCeEEee
Q 005965 373 Y-DVALSIGDGLRPGSIYDA--------NDTAQF-AELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 373 Y-DVtlSLGDGLRPG~iaDA--------~D~AQ~-~EL~~LGEL~krA~e~gVQVMIE 420 (667)
. ++-+.+|..+ ...|+ -|--|+ .-|...-++++.|.++|++||+-
T Consensus 242 ~~~iPIa~dE~~---~~~~~~~~i~~~~~d~v~ikGGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 242 VTWTQINSGEYL---DLQGKRLLLEAHAADILNVHGQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp CCSSEEEECTTC---CHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCCCEEeCCCC---CHHHHHHHHHcCCCCEEEECcCHHHHHHHHHHHHHcCCeEeec
Confidence 6 6666666554 11111 111111 12333346677789999999986
No 161
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=45.41 E-value=26 Score=33.92 Aligned_cols=145 Identities=13% Similarity=0.122 Sum_probs=87.2
Q ss_pred CcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHh
Q 005965 333 KRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWD 412 (667)
Q Consensus 333 ~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e 412 (667)
-++++|++|--.-..++-..++-. .|+.++++++ +.|+++--- . ...- .++++.|-+
T Consensus 32 ~~l~av~d~~~~~~~~~a~~~~~~--~~~~~~~ll~---~~D~V~i~t---p---------~~~h------~~~~~~al~ 88 (308)
T 3uuw_A 32 FEFVGAFTPNKVKREKICSDYRIM--PFDSIESLAK---KCDCIFLHS---S---------TETH------YEIIKILLN 88 (308)
T ss_dssp SEEEEEECSCHHHHHHHHHHHTCC--BCSCHHHHHT---TCSEEEECC---C---------GGGH------HHHHHHHHH
T ss_pred eEEEEEECCCHHHHHHHHHHcCCC--CcCCHHHHHh---cCCEEEEeC---C---------cHhH------HHHHHHHHH
Confidence 378899999887777776666544 3999999988 788877421 1 1111 355667889
Q ss_pred cCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhhcccceeeecCcccccCCC
Q 005965 413 KDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLP 492 (667)
Q Consensus 413 ~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP 492 (667)
+|.-|++|-|-=.-+.+.++=+++.++ ++.+|++-=. .=-.|.|-.+-..||. -.+.+++-. ....|
T Consensus 89 ~gk~vl~EKP~~~~~~~~~~l~~~a~~--~g~~~~v~~~--~r~~p~~~~~~~~ig~--------~~~~~~~~~-r~~~~ 155 (308)
T 3uuw_A 89 LGVHVYVDKPLASTVSQGEELIELSTK--KNLNLMVGFN--RRFCPMYKEIKNNATE--------IVSINICKH-GLNSL 155 (308)
T ss_dssp TTCEEEECSSSSSSHHHHHHHHHHHHH--HTCCEEECCG--GGGCHHHHHHHHHCCS--------EEEEEEEEE-CSSCC
T ss_pred CCCcEEEcCCCCCCHHHHHHHHHHHHH--cCCEEEEeec--cccCHHHHHHHHHcCC--------CcEEEEEec-cCCCC
Confidence 999999999988888888877777666 3555544211 1123444444444432 122222211 11222
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhc
Q 005965 493 NRDDVKAGVIAYKIAAHAADLAK 515 (667)
Q Consensus 493 ~~eDVreGVIA~kIAAHaaDlaK 515 (667)
.+.+-|-.-.-++.|.-|++.
T Consensus 156 --~~~~~~g~l~d~g~H~id~~~ 176 (308)
T 3uuw_A 156 --RNVRFDSTLIDDYIHVIDTAL 176 (308)
T ss_dssp --CSSCHHHHHHHTHHHHHHHHH
T ss_pred --CccccCceeeecchHHHHHHH
Confidence 122222355667888888876
No 162
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=45.21 E-value=44 Score=33.14 Aligned_cols=89 Identities=10% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCHHHHHHHHHHHHh-cC---CCEEEEeccc--------------------------ccccccc--ccC--cccCcccc
Q 005965 296 NLSWEVFRDTLIEQAE-QG---VDYFTIHAGV--------------------------LLRYIPL--TAK--RMTGIVSR 341 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAe-qG---VDfmTIHaGv--------------------------~~~~l~~--~~~--RvtgIVSR 341 (667)
..+.+.+++.+++..+ -| ||.+-||.-. +.+.++. .+| |-.||=.-
T Consensus 83 ~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 162 (316)
T 3o3r_A 83 FFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVSNF 162 (316)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred cCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEEEEecC
Confidence 3566777777777665 34 4556678632 1122221 233 45665555
Q ss_pred ccHHHHHHHHHcC----------CcCchhhhHHHHHHHHhHhceeEe----ccCCCCC
Q 005965 342 GGSIHAKWCLAYH----------KENFAYEHWDEILDICNQYDVALS----IGDGLRP 385 (667)
Q Consensus 342 GGSi~a~Wml~h~----------~ENpLYe~FD~ileI~k~YDVtlS----LGDGLRP 385 (667)
.-.-+...+.... .=||+..+ +++++.|++++|.+- ||-|.||
T Consensus 163 ~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~~~ 219 (316)
T 3o3r_A 163 NHFQIERLLNKPGLKHKPVTNQVECHPYLTQ-EKLIQYCHSKGIAVIAYSPLGSPDRP 219 (316)
T ss_dssp CHHHHHHHHTCTTCCSCCCEEEEECBTTBCC-HHHHHHHHTTTCEEEEECTTCCTTCT
T ss_pred CHHHHHHHHHhCCCCCCceEeeccCCcccch-HHHHHHHHHcCCEEEEecccCCCCCc
Confidence 5555555443221 12555544 789999999999884 6777554
No 163
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=44.92 E-value=1.2e+02 Score=29.75 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhc-CCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 301 VFRDTLIEQAEQ-GVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 301 ~~~d~ieeQAeq-GVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
.+.+.|+.-++. |.|.+-+|. + | +.-...++|-+.+++|++.++.
T Consensus 34 ~~~e~l~~aa~~~G~~~VEl~~-------~-------------------~--------~~~~~~~~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 34 STIDQINAAKEVGELSYVDLPY-------P-------------------F--------TPGVTLSEVKDALKDAGLKAIG 79 (333)
T ss_dssp CHHHHHHHHHHHSSEEEEEEEE-------S-------------------C--------STTCCHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHhCCCCEEEecC-------C-------------------C--------cchhHHHHHHHHHHHcCCeEEE
Confidence 345666667777 999988861 1 0 0035789999999999999873
Q ss_pred c------CCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 380 G------DGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 380 G------DGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
- ..+..|++... |++..+ -+..+-+..+.|.+.|+.+++=-||+
T Consensus 80 ~~~~~~~~~~~~g~l~~~-d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~g~ 130 (333)
T 3ktc_A 80 ITPEIYLQKWSRGAFTNP-DPAARAAAFELMHESAGIVRELGANYVKVWPGQ 130 (333)
T ss_dssp EEECTTSGGGTTCSTTCS-SHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTT
T ss_pred EecCcCcccccCCCCCCc-CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 2 23455566543 444443 34557778899999999999877774
No 164
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=44.68 E-value=83 Score=30.11 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=51.3
Q ss_pred hhhHHHHHHHHhHhceeEeccCCCCC-CCccCC--CcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCC---CCCCchHH
Q 005965 360 YEHWDEILDICNQYDVALSIGDGLRP-GSIYDA--NDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGH---IPMHKIPE 432 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGDGLRP-G~iaDA--~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGH---VPl~~I~~ 432 (667)
.+.|.+.+++|++.++..=.+-..-| |...+. ..+.+++. ...|.+|++.|.++||++.+|--++ -.++..++
T Consensus 106 ~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~ 185 (309)
T 2hk0_A 106 KAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAE 185 (309)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHH
Confidence 47899999999999876544321000 322111 22333333 3467899999999999999997432 24566666
Q ss_pred HHHHHHHh
Q 005965 433 NMQKQLEW 440 (667)
Q Consensus 433 Nv~lqk~l 440 (667)
-.++-+++
T Consensus 186 ~~~l~~~v 193 (309)
T 2hk0_A 186 GVAFVKDV 193 (309)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66665554
No 165
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=44.38 E-value=1.6e+02 Score=30.67 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=102.3
Q ss_pred HHHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHH
Q 005965 165 YYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ 244 (667)
Q Consensus 165 ~~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~ 244 (667)
..|+.++-+.----.++..|++.-.+.- |+ ..-++.+++.+| ..+.++=+++++
T Consensus 81 ~~A~said~ALwDl~gK~~g~Pv~~LLG----G~------------------~r~~v~~y~~~~----~~~~e~~~~~a~ 134 (405)
T 3rr1_A 81 MSAIAGIDQALWDIKGKVLGVPVYELLG----GL------------------VRDKMRTYSWVG----GDRPADVIAGMK 134 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSBHHHHTT----CC------------------SCSCEEEEEECC----CSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHhC----cc------------------ccCceeeeEeCC----CCCHHHHHHHHH
Confidence 3466666555555667777777655442 11 023466677765 346777788888
Q ss_pred HHHHhCCcEeeecCCCCC----------hHHHHHHH--HhcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHHh
Q 005965 245 WATMWGADTVMDLSTGRH----------IHETREWI--LRNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQAE 311 (667)
Q Consensus 245 ~A~~~GADtVMDLSTGgd----------i~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAe 311 (667)
.+.+.|-.+| -| .|.+ +++-.+.| +|.. +| .+||. ..++ ...|.++..+.+.+-.+
T Consensus 135 ~~~~~G~~~i-Kl-~G~~~~~~~~~~~~~~~d~e~v~avR~a---vG~d~~L~---vDaN---~~~~~~~A~~~~~~L~~ 203 (405)
T 3rr1_A 135 ALQAGGFDHF-KL-NGCEEMGIIDTSRAVDAAVARVAEIRSA---FGNTVEFG---LDFH---GRVSAPMAKVLIKELEP 203 (405)
T ss_dssp HHHHTTCCEE-EE-ESCCSSSCBCSHHHHHHHHHHHHHHHHT---TGGGSEEE---EECC---SCBCHHHHHHHHHHHGG
T ss_pred HHHHcCCCEE-EE-ecCCcccccccchhHHHHHHHHHHHHHH---hCCCceEE---EECC---CCCCHHHHHHHHHHHHh
Confidence 8899998776 45 5543 22211111 1111 11 11221 1223 23567777777777677
Q ss_pred cCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccC-
Q 005965 312 QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYD- 390 (667)
Q Consensus 312 qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaD- 390 (667)
.||+|+- --+. ..+++.+-+|.++.++-+.+|..+.- ..|
T Consensus 204 ~~i~~iE--eP~~-----------------------------------~~d~~~~~~l~~~~~iPIa~dE~i~~--~~~~ 244 (405)
T 3rr1_A 204 YRPLFIE--EPVL-----------------------------------AEQAETYARLAAHTHLPIAAGERMFS--RFDF 244 (405)
T ss_dssp GCCSCEE--CSSC-----------------------------------CSSTHHHHHHHTTCSSCEEECTTCCS--HHHH
T ss_pred cCCCEEE--CCCC-----------------------------------cccHHHHHHHHhcCCCCEEecCCcCC--HHHH
Confidence 7888872 1111 12345555555555555555544320 000
Q ss_pred -------C-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHh
Q 005965 391 -------A-----NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEW 440 (667)
Q Consensus 391 -------A-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~l 440 (667)
+ -|.....-|-..-+++..|.++||+||+-+ +..-|....-+|.-.
T Consensus 245 ~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~----~~s~i~~aa~~hlaa 302 (405)
T 3rr1_A 245 KRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHC----PLGPIALAACLHVDF 302 (405)
T ss_dssp HHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBC----CSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCC----CCcHHHHHHHHHHHH
Confidence 0 111222223333466777889999999743 334455555555543
No 166
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=44.31 E-value=92 Score=31.32 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.+.+.+..++-.++|.+.+-||.|
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g 164 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVG 164 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 6788999999888999999999977
No 167
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=44.23 E-value=1.4e+02 Score=30.50 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
..+.+.+.+..++-.++|.+.+-||.|-
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~ 170 (389)
T 2oz8_A 143 HLDDDAFVSLFSHAASIGYSAFKIKVGH 170 (389)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEccCC
Confidence 4588999999999999999999999763
No 168
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=44.18 E-value=1.4e+02 Score=30.43 Aligned_cols=131 Identities=18% Similarity=0.106 Sum_probs=74.8
Q ss_pred HHHHHHHHhHhceeEeccC---CCCCCCccCCCcH-HHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHH
Q 005965 363 WDEILDICNQYDVALSIGD---GLRPGSIYDANDT-AQFAE-LLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQ 437 (667)
Q Consensus 363 FD~ileI~k~YDVtlSLGD---GLRPG~iaDA~D~-AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lq 437 (667)
.+++++++++|++.+=|=- | .|....+..+- .-++| +..|.+++++|.++||.=+|==||.-.-...+.|+++-
T Consensus 135 d~~m~~v~a~~~~~vVlmh~~eG-~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll 213 (294)
T 2dqw_A 135 DERMVALAARHGVAAVVMHMPVP-DPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALL 213 (294)
T ss_dssp CHHHHHHHHHHTCEEEEECCSSS-CTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHH
T ss_pred ChHHHHHHHHhCCCEEEEcCCCC-CCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHH
Confidence 3589999999998876632 2 14332211110 01233 45788999999999995444448876656688898887
Q ss_pred HHhc----CCCCccccCcc-------ccccC-C-CchhHHHhHHHHHhhhcccceeeecCcccccCCCChhHHHHHHHHH
Q 005965 438 LEWC----NEAPFYTLGPL-------TTDIA-P-GYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAY 504 (667)
Q Consensus 438 k~lC----~~APfYvLGPL-------vTDIA-p-GYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~eDVreGVIA~ 504 (667)
+++- -+.|..+ |.= +++.. | .=+..|+ .-.+++...|++++ .+.||++=+-|.
T Consensus 214 ~~l~~~~~~g~Pvl~-G~Srksfig~l~g~p~~~~R~~~t~-a~~~~a~~~Ga~Iv------------RvHDV~~~~~a~ 279 (294)
T 2dqw_A 214 RRLDEIVALGHPVLV-GLSRKRTIGELSGVEDPAQRVHGSV-AAHLFAVMKGVRLL------------RVHDVRAHREAL 279 (294)
T ss_dssp HTHHHHHTTSSCBEE-CCTTCHHHHHHHTCCSGGGCHHHHH-HHHHHHHHTTCCEE------------EESCHHHHHHHH
T ss_pred HHHHHHhcCCCCEEE-EeccchhhhhhcCCCchhhhHHHHH-HHHHHHHHcCCcEE------------EcCCHHHHHHHH
Confidence 7662 2445422 330 11211 1 2223333 34667778888765 344566655555
Q ss_pred HHHH
Q 005965 505 KIAA 508 (667)
Q Consensus 505 kIAA 508 (667)
+++.
T Consensus 280 ~~~~ 283 (294)
T 2dqw_A 280 GVWE 283 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 169
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=44.01 E-value=70 Score=29.88 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=53.1
Q ss_pred hCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEecccccccc
Q 005965 249 WGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYI 328 (667)
Q Consensus 249 ~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l 328 (667)
.|-.+|.+++....- ....+ ..+-.=.+|+-. ... ..-.++...+.|++...+|-- +-|||--
T Consensus 64 ~gIt~Vlnv~~e~~~--~~~~~---~~i~y~~ip~~d-----~~~-i~~~~~~~~~fI~~~~~~g~~-VLVHC~~----- 126 (182)
T 2j16_A 64 LPFDVVINVAEEAND--LRMQV---PAVEYHHYRWEH-----DSQ-IALDLPSLTSIIHAATTKREK-ILIHAQC----- 126 (182)
T ss_dssp TTCSEEEECCSCC-------------CCEEEECCCSS-----GGG-GGGGHHHHHHHHHHHHHTTCC-EEEEESS-----
T ss_pred hCCCEEEEecCCCCC--chhcc---CCceEEEEecCC-----Cch-HHHHHHHHHHHHHHHHhcCCe-EEEECCC-----
Confidence 689999999875432 11111 012222233311 001 111356667777777666643 4589942
Q ss_pred ccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH
Q 005965 329 PLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ 372 (667)
Q Consensus 329 ~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~ 372 (667)
| +||-|+++++|++....- .+++-++..++
T Consensus 127 --------G-~sRS~tvv~ayLm~~~~~-----s~~~A~~~v~~ 156 (182)
T 2j16_A 127 --------G-LSRSATLIIAYIMKYHNL-----SLRHSYDLLKS 156 (182)
T ss_dssp --------C-CSHHHHHHHHHHHHHTTC-----CHHHHHHHHHH
T ss_pred --------C-CChHHHHHHHHHHHHcCC-----CHHHHHHHHHH
Confidence 5 599999999999887443 46666777766
No 170
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=43.97 E-value=52 Score=33.60 Aligned_cols=128 Identities=16% Similarity=0.109 Sum_probs=78.8
Q ss_pred HHHHHHHhHhceeEeccCCCC--CCCcc-C---CCcHHHHHH-HHHHHHHHHHHHhcCCe---EEeeCCCCCCCCch-HH
Q 005965 364 DEILDICNQYDVALSIGDGLR--PGSIY-D---ANDTAQFAE-LLTQGELTRRAWDKDVQ---VMNEGPGHIPMHKI-PE 432 (667)
Q Consensus 364 D~ileI~k~YDVtlSLGDGLR--PG~ia-D---A~D~AQ~~E-L~~LGEL~krA~e~gVQ---VMIEGPGHVPl~~I-~~ 432 (667)
+++++++++|++.+=|=- +| |.... + -.| -++| +..|.+++++|.++||. +++- ||.-..... +.
T Consensus 130 ~~m~~~~a~~~~~vVlmh-~~G~p~tm~~~~~~y~d--v~~ev~~~l~~~i~~a~~~Gi~~~~IilD-PG~Gf~kt~~~~ 205 (294)
T 2y5s_A 130 PGAIDAVRDGNSGLCAMH-MLGEPQTMQVGEPDYGD--VVTDVRDFLAARAQALRDAGVAAERICVD-PGFGFGKAVVDD 205 (294)
T ss_dssp TTHHHHHSSSSCEEEEEC-CCEETTTTEECCCCCSS--HHHHHHHHHHHHHHHHHHTTCCGGGEEEE-CCTTSSSCTTHH
T ss_pred hHHHHHHHHhCCCEEEEC-CCCCCccccccCCcccc--HHHHHHHHHHHHHHHHHHcCCChhhEEEe-CCCcccccchHH
Confidence 378999999998776532 12 33321 1 112 1233 55688899999999996 7777 998888888 99
Q ss_pred HHHHHHHhcC---------CCCccccCc--c-----ccccCC--CchhHHHhHHHHHhhhcccceeeecCcccccCCCCh
Q 005965 433 NMQKQLEWCN---------EAPFYTLGP--L-----TTDIAP--GYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNR 494 (667)
Q Consensus 433 Nv~lqk~lC~---------~APfYvLGP--L-----vTDIAp--GYDHItsAIGaA~aa~~GadfLCYVTPaEHLgLP~~ 494 (667)
|+++-+.+-. +.|.. +|+ . +++..| .=+..|+| =.+++...||+++ .+
T Consensus 206 n~~ll~~l~~l~~~~~~~~g~Pvl-~G~Srksfig~l~g~~~~~~R~~~t~a-~~~~a~~~Ga~Iv------------rv 271 (294)
T 2y5s_A 206 NYALLAALPDTAPARPDGRAYPIL-AGMSRKSMLGAVIGGKPPLERVAASVA-AALCAVERGAAIV------------RV 271 (294)
T ss_dssp HHHHHHTGGGGSCBCTTSSBCCBE-EECTTCHHHHTTTTSCCGGGCHHHHHH-HHHHHHHTTCSEE------------EE
T ss_pred HHHHHHHHHHHHhccccCCCCCEE-EEecccHHhhhhcCCCchhhhhHHHHH-HHHHHHHcCCcEE------------Ec
Confidence 9998877642 33432 233 0 122212 12234444 4667788898876 34
Q ss_pred hHHHHHHHHHHHHHH
Q 005965 495 DDVKAGVIAYKIAAH 509 (667)
Q Consensus 495 eDVreGVIA~kIAAH 509 (667)
-||++=+-|.+++.-
T Consensus 272 HDV~e~~~a~~~~~a 286 (294)
T 2y5s_A 272 HDVAATVDALSVWNA 286 (294)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 467766666666543
No 171
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=43.87 E-value=20 Score=33.74 Aligned_cols=29 Identities=14% Similarity=0.096 Sum_probs=21.5
Q ss_pred cccCCCCCChHHHHHHHHHHHHhCCcEeeec
Q 005965 227 IGNSAVASSIEEEVYKVQWATMWGADTVMDL 257 (667)
Q Consensus 227 IGtS~~~~~ieeEveKl~~A~~~GADtVMDL 257 (667)
|=-+.|..+++++++-++. ..-|+| +|++
T Consensus 9 lilalD~~~~~~~~~~~~~-~~~~vd-~ie~ 37 (218)
T 3jr2_A 9 IQIALDQTNLTDAVAVASN-VASYVD-VIEV 37 (218)
T ss_dssp EEEEECCSSHHHHHHHHHH-HGGGCS-EEEE
T ss_pred eEEEeCCCCHHHHHHHHHH-hcCCce-EEEe
Confidence 3447788999999999987 466776 4564
No 172
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=43.74 E-value=49 Score=30.93 Aligned_cols=76 Identities=14% Similarity=0.256 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
++.+..+.-.+.|+|++.|+. |-.+...|+ .. +.|-+|++.+++.|-.+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~----------------------------~d~~~~~~~--~~-~~i~~i~~~~~ipv~v~ 80 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVD----------------------------LDAAFGRGS--NH-ELLAEVVGKLDVQVELS 80 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEE----------------------------HHHHTTSCC--CH-HHHHHHHHHCSSEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEc----------------------------CcccccCCC--hH-HHHHHHHHhcCCcEEEE
Confidence 456666666778999998875 111112333 23 88888999999999999
Q ss_pred CCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 381 DGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 381 DGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
+|+|- ..| ++.+.+.|+...+=|....
T Consensus 81 ggi~~--------~~~----------~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 81 GGIRD--------DES----------LAAALATGCARVNVGTAAL 107 (244)
T ss_dssp SSCCS--------HHH----------HHHHHHTTCSEEEECHHHH
T ss_pred CCCCC--------HHH----------HHHHHHcCCCEEEECchHh
Confidence 99862 333 3444567887776666554
No 173
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=43.61 E-value=1.4e+02 Score=28.10 Aligned_cols=61 Identities=16% Similarity=0.089 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHhHhceeEe-cc-CCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeC
Q 005965 360 YEHWDEILDICNQYDVALS-IG-DGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlS-LG-DGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEG 421 (667)
.+..+++-+.+++|++.++ +. .+.++-.+.. .|....+ -+..+-+..+.|.+.|+.+++=.
T Consensus 65 ~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~-~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 65 REQRLALVNAIVETGVRVPSMCLSAHRRFPLGS-EDDAVRAQGLEIMRKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCcccCCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 4678899999999999986 32 1221111222 3443333 34567788899999999988743
No 174
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=43.52 E-value=44 Score=31.39 Aligned_cols=53 Identities=9% Similarity=0.278 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
++.+..+.-.+.|+|++.++. . -|+ ...|+ .. +.|-+|++++++.|-.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~-~------------------d~~---------~~~~~--~~-~~i~~i~~~~~ipv~v~ 81 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVD-L------------------DAA---------FGTGD--NR-ALIAEVAQAMDIKVELS 81 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEE-H------------------HHH---------HTSCC--CH-HHHHHHHHHCSSEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEec-C------------------chh---------hcCCC--hH-HHHHHHHHhcCCcEEEE
Confidence 556666666779999998875 0 011 12333 33 78889999999999999
Q ss_pred CCCC
Q 005965 381 DGLR 384 (667)
Q Consensus 381 DGLR 384 (667)
.|+|
T Consensus 82 ggI~ 85 (244)
T 1vzw_A 82 GGIR 85 (244)
T ss_dssp SSCC
T ss_pred CCcC
Confidence 9997
No 175
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=43.48 E-value=1.8e+02 Score=29.21 Aligned_cols=102 Identities=15% Similarity=0.062 Sum_probs=65.3
Q ss_pred HHHHHHHHhCCcEeeec----CCCCChHHHHHHHHhcCCCCc----ccchhhhHHH--HhcC-----CCCCCCHHHHHHH
Q 005965 241 YKVQWATMWGADTVMDL----STGRHIHETREWILRNSAVPV----GTVPIYQALE--KVDG-----IAENLSWEVFRDT 305 (667)
Q Consensus 241 eKl~~A~~~GADtVMDL----STGgdi~~~R~~Il~nspvPV----GTVPIYqAl~--k~~g-----~~~~lt~e~~~d~ 305 (667)
+=++...+.||+.|==| ..+|++..+ +.|-+.+.+|| +.++.||..+ .+|- ....|+.+.+.+.
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L-~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l 161 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQGAPEFL-TAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKEL 161 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCCCHHHH-HHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeccccccCCCHHHH-HHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHH
Confidence 34567788999987432 234566655 33446778999 7899999643 2222 2357888888888
Q ss_pred HHHHHhcCCCEEE-EeccccccccccccCcccCcccccc
Q 005965 306 LIEQAEQGVDYFT-IHAGVLLRYIPLTAKRMTGIVSRGG 343 (667)
Q Consensus 306 ieeQAeqGVDfmT-IHaGv~~~~l~~~~~RvtgIVSRGG 343 (667)
+..--+-|++.|. +|.--.++......-++.||-.|..
T Consensus 162 ~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l 200 (272)
T 3tsm_A 162 EDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNL 200 (272)
T ss_dssp HHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCT
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC
Confidence 8777778998764 6643222222223458889988753
No 176
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=43.22 E-value=29 Score=34.42 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=71.8
Q ss_pred CCceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCCCC-ChHHHHHHHH--hcCCCCcccchh
Q 005965 210 LEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLSTGR-HIHETREWIL--RNSAVPVGTVPI 283 (667)
Q Consensus 210 ~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLSTGg-di~~~R~~Il--~nspvPVGTVPI 283 (667)
++-+-||+| +.||=+.|- ..+.++=++.++.+...|||.| +|+...- |+..+.+.+- +.. ++.+|+
T Consensus 10 v~~~~ig~g-~PkIcvpl~----~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~---~~~lPi 81 (258)
T 4h3d_A 10 VKNITIGEG-RPKICVPII----GKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSY---IHDIPL 81 (258)
T ss_dssp ETTEEETSS-SCEEEEEEC----CSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHH---CTTSCE
T ss_pred EcCEEeCCC-CCEEEEEeC----CCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHh---cCCCCE
Confidence 455788888 578877762 3466666788888899999998 7887663 6666665542 221 123444
Q ss_pred hhHHHH-h-cCCCCCCCHHHHHHHHHHHHhcC-CCEEEEecccc
Q 005965 284 YQALEK-V-DGIAENLSWEVFRDTLIEQAEQG-VDYFTIHAGVL 324 (667)
Q Consensus 284 YqAl~k-~-~g~~~~lt~e~~~d~ieeQAeqG-VDfmTIHaGv~ 324 (667)
-=.+.. . ||. -.++.+.+++.+++-++.| |||+-|-.-..
T Consensus 82 I~T~Rt~~EGG~-~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~ 124 (258)
T 4h3d_A 82 LFTFRSVVEGGE-KLISRDYYTTLNKEISNTGLVDLIDVELFMG 124 (258)
T ss_dssp EEECCCGGGTCS-CCCCHHHHHHHHHHHHHTTCCSEEEEEGGGC
T ss_pred EEEEechhhCCC-CCCCHHHHHHHHHHHHhcCCchhhHHhhhcc
Confidence 333321 1 454 6689999999999888887 99998776443
No 177
>4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B*
Probab=42.75 E-value=8.2 Score=34.99 Aligned_cols=31 Identities=23% Similarity=0.437 Sum_probs=28.6
Q ss_pred eEEeeCCCC-CCCCchHHHHHHHHHhcCCCCc
Q 005965 416 QVMNEGPGH-IPMHKIPENMQKQLEWCNEAPF 446 (667)
Q Consensus 416 QVMIEGPGH-VPl~~I~~Nv~lqk~lC~~APf 446 (667)
-|.|.|.|| ||.+|=++-.++-+++-++.||
T Consensus 123 f~~V~~AGHmVP~dqP~~al~m~~~fl~g~pF 154 (155)
T 4az3_B 123 FLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 154 (155)
T ss_dssp EEEETTCCSCHHHHCHHHHHHHHHHHHTTCCC
T ss_pred EEEECCCcCcChhhCHHHHHHHHHHHHcCCCC
Confidence 588999999 7999999999999999999998
No 178
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=42.34 E-value=39 Score=32.07 Aligned_cols=109 Identities=13% Similarity=-0.003 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecccccccccc-ccCcccCccccccHHHHHHHHHcCCcCchh-hhH-HHHHHHHhHh
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPL-TAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHW-DEILDICNQY 373 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~-~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~F-D~ileI~k~Y 373 (667)
.+.+++.+.+.++- .|+..+|.+ +.+.... ... ...|++ |..|+-| -.| .++.+.|+++
T Consensus 62 ~~~~~l~~~~~~~r---~di~~v~~~-~~~~n~~a~~~-~vDII~-------------Hp~~~~~~~~~~~~~a~~A~e~ 123 (212)
T 1v77_A 62 PKPSLVRDTVQKFK---SYLIYVESN-DLRVIRYSIEK-GVDAII-------------SPWVNRKDPGIDHVLAKLMVKK 123 (212)
T ss_dssp CCHHHHHHHHHHCS---SSEEEEECS-CHHHHHHHHHT-TCSEEE-------------CTTTTSSSCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC---cEEEEEEeC-CHHHHHHHHhC-CCCEEe-------------cccccccCCCCCHHHHHHHHHC
Confidence 45566666665432 788888876 2222221 123 455665 3333311 112 3788888999
Q ss_pred ceeEec--cCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCc
Q 005965 374 DVALSI--GDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHK 429 (667)
Q Consensus 374 DVtlSL--GDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~ 429 (667)
+|.|=+ +.++|- ....+.+. +...-++.+.++++||.++|=.=-|.|.+-
T Consensus 124 gv~lEIn~s~~~~~----~~~~R~~~--~~~~~~il~l~k~~g~~ivisSDAh~~~~v 175 (212)
T 1v77_A 124 NVALGFSLRPLLYS----NPYERANL--LRFMMKAWKLVEKYKVRRFLTSSAQEKWDV 175 (212)
T ss_dssp TCEEEEESHHHHHS----CHHHHHHH--HHHHHHHHHHHHHHTCCEEEECCCSSGGGC
T ss_pred CeEEEEECcHHhcC----CcchHHHH--HHHHHHHHHHHHhcCCCEEEeCCCCChhhc
Confidence 987644 334431 01122222 344557778888889998888888888765
No 179
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=42.15 E-value=55 Score=34.52 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=39.6
Q ss_pred HHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHHhhhcccceeee
Q 005965 405 ELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCY 482 (667)
Q Consensus 405 EL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~aa~~GadfLCY 482 (667)
+.++++.++|+.+++=.-.|--.....+.++.-++.+.+.|+.+ |- --...- +-.+..+|+|++..
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~-g~--------~~t~e~---a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVA-GN--------VATPEG---TEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEE-EE--------ECSHHH---HHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEe-CC--------cCCHHH---HHHHHHcCCCEEEE
Confidence 56777888999987754444323345566777777776666533 21 111222 24455689999976
No 180
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=41.99 E-value=27 Score=34.36 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=53.9
Q ss_pred hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCC---------ch
Q 005965 360 YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMH---------KI 430 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~---------~I 430 (667)
...+++||+|+++|+|..++== +|.. +...-+++++..+.|..+-.-|=.|..+. +|
T Consensus 61 ~~~~~rll~ll~~~~v~aTfFv---~g~~-----------~~~~p~~v~~~~~~GhEIg~H~~~H~~~~~~s~~~~~~ei 126 (300)
T 3rxz_A 61 LVGVPRLLGILDEFNVPGTFFV---PGYT-----------AHRHPEPIRSIARAGHEIAHHGYLHESLVGADEDTERKIL 126 (300)
T ss_dssp HTHHHHHHHHHHHTTCCEEEEE---CHHH-----------HHHSHHHHHHHHHTTCEEEECCSSCCCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEE---EHHH-----------HhhCHHHHHHHHHcCCEEEecCCCCcccccCCHHHHHHHH
Confidence 4678999999999998655410 1211 11234889999999999999999998875 56
Q ss_pred HHHHHHHHHhcCCCCccc
Q 005965 431 PENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 431 ~~Nv~lqk~lC~~APfYv 448 (667)
....++-+++++..|-+.
T Consensus 127 ~~~~~~l~~~~G~~p~~f 144 (300)
T 3rxz_A 127 TRGIEALEEVAGVHPVGY 144 (300)
T ss_dssp HHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHHhCCCCcEE
Confidence 666777777777766443
No 181
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=41.82 E-value=2.9e+02 Score=27.89 Aligned_cols=139 Identities=9% Similarity=-0.035 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecCCCC-------ChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLSTGR-------HIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENLSWEVFR 303 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLSTGg-------di~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~ 303 (667)
.++++=.+.++.+.+.|-++|= +-.|. ++....+.|- |.. +| .+||. ..++ ...|.++..
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iK-ik~g~~~~~~~~~~~~~~e~v~avr~a---~g~d~~l~---vDan---~~~~~~~a~ 217 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIK-LHTWMPPVSWAPDVKMDLKACAAVREA---VGPDIRLM---IDAF---HWYSRTDAL 217 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEE-EECCCTTSTTCCCHHHHHHHHHHHHHH---HCTTSEEE---EECC---TTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEE-EcCCcCccccccchHHHHHHHHHHHHH---hCCCCeEE---EECC---CCCCHHHHH
Confidence 4677777888889999998874 55554 4433222221 110 11 12221 1222 235778877
Q ss_pred HHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCC
Q 005965 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDG 382 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDG 382 (667)
+.+..-.+.||+|+- -|+ ..+++.+-++.++.++-+.+|..
T Consensus 218 ~~~~~l~~~~i~~iE--------------------------------------~P~~~~~~~~~~~l~~~~~iPIa~dE~ 259 (382)
T 1rvk_A 218 ALGRGLEKLGFDWIE--------------------------------------EPMDEQSLSSYKWLSDNLDIPVVGPES 259 (382)
T ss_dssp HHHHHHHTTTCSEEE--------------------------------------CCSCTTCHHHHHHHHHHCSSCEEECSS
T ss_pred HHHHHHHhcCCCEEe--------------------------------------CCCChhhHHHHHHHHhhCCCCEEEeCC
Confidence 777766667888762 122 13577777888888888888877
Q ss_pred CCC--CC--------ccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 383 LRP--GS--------IYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 383 LRP--G~--------iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
++- -. -+|. -|..++.-+-..-++++.|.++|++||+-
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 260 AAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp CSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred ccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 654 00 0111 13444444555567888899999999986
No 182
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=41.76 E-value=17 Score=36.12 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=69.0
Q ss_pred cCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--CCChHHHHHHHHhcCCCCcccch---hhhHHH
Q 005965 217 RNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--GRHIHETREWILRNSAVPVGTVP---IYQALE 288 (667)
Q Consensus 217 ~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--Ggdi~~~R~~Il~nspvPVGTVP---IYqAl~ 288 (667)
++-.+||-.-||-..-....+.-+.-.++|++.|||-| +++.- .+|.+.+++.|-.-...- +.+| ||+.
T Consensus 60 ~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~-~~~~lKvIiEt-- 136 (231)
T 3ndo_A 60 APSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAV-RAATLKVIVES-- 136 (231)
T ss_dssp CCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHT-TTSEEEEECCH--
T ss_pred cCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHc-cCCceEEEEEC--
Confidence 44568888888888877788888889999999999875 55543 368888887764432211 1233 3332
Q ss_pred HhcCCCCCC----CHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 289 KVDGIAENL----SWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 289 k~~g~~~~l----t~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
-.| |.|++....+--.+.|.||+--=.|.
T Consensus 137 ------~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf 169 (231)
T 3ndo_A 137 ------AALLEFSGEPLLADVCRVARDAGADFVKTSTGF 169 (231)
T ss_dssp ------HHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSC
T ss_pred ------cccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCC
Confidence 123 88999999998899999999654443
No 183
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=41.69 E-value=2.4e+02 Score=29.10 Aligned_cols=173 Identities=16% Similarity=0.128 Sum_probs=96.0
Q ss_pred CCCCCCCCceEeecCCceeEeeccccCCCC----CChHHHHHHHHHHHHhCCcEeeecCCCC--ChHHHHHHHHhcCCCC
Q 005965 204 NKKHLELEPMIVGRNFLVKVNANIGNSAVA----SSIEEEVYKVQWATMWGADTVMDLSTGR--HIHETREWILRNSAVP 277 (667)
Q Consensus 204 N~nh~~~~p~~IG~gl~tKVNANIGtS~~~----~~ieeEveKl~~A~~~GADtVMDLSTGg--di~~~R~~Il~nspvP 277 (667)
|.....+.-.+.|+ ++...|.-++.. .+.+.|+.=++.|.++|+- |=+|+.. .|.++++.- ..-|
T Consensus 64 ~~~~~d~st~i~G~----~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~--~~~s~~~s~~le~v~~~~---~~~~ 134 (368)
T 2nli_A 64 DVEAPDTSTEILGH----KIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTI--MSISAYSGATFEEISEGL---NGGP 134 (368)
T ss_dssp CCSCCCCCEEETTE----EESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCC--EEECTTCSSCHHHHHHHH---TTCC
T ss_pred CCccCCcceEECCE----ecCCceeecchhhccCCCcHHHHHHHHHHHHcCCC--EEeechHhHHHHHHHHhC---CCCC
Confidence 33344445555553 455667777554 5777888889999999985 4467766 466554421 1111
Q ss_pred cccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccc---cccccccC---ccc-Cc-------ccccc
Q 005965 278 VGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLL---RYIPLTAK---RMT-GI-------VSRGG 343 (667)
Q Consensus 278 VGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~---~~l~~~~~---Rvt-gI-------VSRGG 343 (667)
..+|-. + .=+++...+.+++-.+.|++.+-||.+... +..+...+ -++ .. ...|.
T Consensus 135 ----~~~QLy----~---~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~ 203 (368)
T 2nli_A 135 ----RWFQIY----M---AKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGM 203 (368)
T ss_dssp ----EEEEEC----C---BSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC
T ss_pred ----EEEEEe----c---cCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCc
Confidence 133321 1 114577778888777889999999988532 11111000 011 01 22344
Q ss_pred HHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 344 SIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 344 Si~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
++ .|+.... +|-. .++.|-.|.+..++.+.+..- + -.|.+++|.++||..++=
T Consensus 204 ~l--~~~~~~~--d~~~-~~~~i~~lr~~~~~PvivK~v---------~----------~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 204 SL--NNIYGAS--KQKI-SPRDIEEIAGHSGLPVFVKGI---------Q----------HPEDADMAIKRGASGIWV 256 (368)
T ss_dssp -------CTTB--CSBC-CHHHHHHHHHHSSSCEEEEEE---------C----------SHHHHHHHHHTTCSEEEE
T ss_pred hH--Hhhhhcc--Cchh-hHHHHHHHHHHcCCCEEEEcC---------C----------CHHHHHHHHHcCCCEEEE
Confidence 54 6765432 2222 266677777778888887621 1 125678999999997654
No 184
>3dxe_B Amyloid beta A4 protein; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} PDB: 3dxc_B 3dxd_B 2roz_A
Probab=41.67 E-value=8.2 Score=28.90 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=15.8
Q ss_pred HHHHHcCCcCchhhhHHH
Q 005965 348 KWCLAYHKENFAYEHWDE 365 (667)
Q Consensus 348 ~Wml~h~~ENpLYe~FD~ 365 (667)
.=|..|+=|||-|..|++
T Consensus 15 ~~mQ~~GYENPTYkyfE~ 32 (35)
T 3dxe_B 15 SKMQQNGYENPTYKFFEQ 32 (35)
T ss_dssp HHHHHTCEECHHHHHHHH
T ss_pred HHHHhccCcCcHHHHHHh
Confidence 348899999999999986
No 185
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=41.61 E-value=71 Score=27.41 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=67.4
Q ss_pred HHhCCcEeeecCCCCChHHH--HHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHET--REWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~--R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+.|..+|.||......... -....+...+-.=.+|+-.. .+....-..+.+++.|.+..++|- =+-|||.
T Consensus 25 ~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~----~~~~~~~~~~~~~~~i~~~~~~~~-~vlVHC~-- 97 (157)
T 3rgo_A 25 LDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDM----TGVPTLANLHKGVQFALKYQALGQ-CVYVHCK-- 97 (157)
T ss_dssp HHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTT----TSSCCHHHHHHHHHHHHHHHHTTC-EEEEESS--
T ss_pred HHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCC----CCCChHHHHHHHHHHHHHHHHCCC-EEEEECC--
Confidence 37899999999987543210 01111122222222232210 000000013455666777666653 5679994
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHH
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQG 404 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LG 404 (667)
.| +||-|.+++.|++....- .+++.++.+++ .||+.+-. ..|+.-|...-
T Consensus 98 -------~G-----~~Rsg~~~~a~l~~~~~~-----~~~~a~~~v~~----------~R~~~~~~---~~~~~~L~~~~ 147 (157)
T 3rgo_A 98 -------AG-----RSRSATMVAAYLIQVHNW-----SPEEAIEAIAK----------IRSHISIR---PSQLEVLKEFH 147 (157)
T ss_dssp -------SS-----SSHHHHHHHHHHHHHHTC-----CHHHHHHHHHH----------HSTTCCCC---HHHHHHHHHHH
T ss_pred -------CC-----CChHHHHHHHHHHHHcCC-----CHHHHHHHHHH----------HCCCCCCC---HHHHHHHHHHH
Confidence 22 689999999998876432 46778888877 48887753 44555555443
No 186
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=41.29 E-value=52 Score=30.10 Aligned_cols=66 Identities=20% Similarity=0.136 Sum_probs=38.6
Q ss_pred HHHHHHhCCcEeeecCCC--CChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEe
Q 005965 243 VQWATMWGADTVMDLSTG--RHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIH 320 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTG--gdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIH 320 (667)
++.|.++|||.|+=-... .++.++.+++-+. .++++- + =++.+...+.+++-.+.|+||+.+|
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~v----~----------~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVVV----D----------MICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEE----E----------CTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEEE----E----------ecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 678899999987633222 3456666665433 333320 0 0111223456677778899999887
Q ss_pred ccc
Q 005965 321 AGV 323 (667)
Q Consensus 321 aGv 323 (667)
.|.
T Consensus 135 ~g~ 137 (211)
T 3f4w_A 135 TGT 137 (211)
T ss_dssp CCH
T ss_pred CCC
Confidence 654
No 187
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=41.15 E-value=75 Score=32.61 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
..+.|.+.+.+++-.++|.+.+=|+.|
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G 169 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIG 169 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccC
Confidence 457899999999999999999998876
No 188
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=41.01 E-value=3.2e+02 Score=28.23 Aligned_cols=148 Identities=10% Similarity=0.122 Sum_probs=81.0
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe-eecCCCCChHHHH---HHHHhcCCCCcccchhhhHHHHhcCCC
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV-MDLSTGRHIHETR---EWILRNSAVPVGTVPIYQALEKVDGIA 294 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV-MDLSTGgdi~~~R---~~Il~nspvPVGTVPIYqAl~k~~g~~ 294 (667)
-++.+++++|.... .+.++=+++++.+++.|..+| +.+....|+..+| +.+=...++.| .+++.
T Consensus 148 ~~v~~~~s~g~~~~-~~~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v~avR~a~G~~~~L~v----------DaN~~- 215 (400)
T 3mwc_A 148 NYIESGAALGIPED-GRIETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAVGDHFPLWT----------DANSS- 215 (400)
T ss_dssp SEEEBCEEECCCTT-CCHHHHHHHHHHHHHHTCSCEEEECBTTBSHHHHHHHHHHHCTTSCEEE----------ECTTC-
T ss_pred CeEEeeEEeccCCC-CCHHHHHHHHHHHHHcCCCEEEEEeCcchHHHHHHHHHHhcCCCCEEEE----------eCCCC-
Confidence 34556777763321 137777788888888897775 3333344544333 22111111111 12222
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh-hhHHHHHHHHhHh
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHWDEILDICNQY 373 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~FD~ileI~k~Y 373 (667)
.|.++ .+.+.+-.+.||+|+ |-|+- .+++.+-++.++.
T Consensus 216 --w~~~~-~~~~~~l~~~~i~~i--------------------------------------EqP~~~~d~~~~~~l~~~~ 254 (400)
T 3mwc_A 216 --FELDQ-WETFKAMDAAKCLFH--------------------------------------EQPLHYEALLDLKELGERI 254 (400)
T ss_dssp --CCGGG-HHHHHHHGGGCCSCE--------------------------------------ESCSCTTCHHHHHHHHHHS
T ss_pred --CCHHH-HHHHHHHHhcCCCEE--------------------------------------eCCCChhhHHHHHHHHhhC
Confidence 34444 455544445577766 22443 3577788888888
Q ss_pred ceeEeccCCCCCCCcc--------CC-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 374 DVALSIGDGLRPGSIY--------DA-----NDTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 374 DVtlSLGDGLRPG~ia--------DA-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
++-+.+|..+.- .. .+ -|..++.-|-..-++++.|.++|++||+-+
T Consensus 255 ~iPIa~dE~~~~--~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 255 ETPICLDESLIS--SRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp SSCEEESTTCCS--HHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEeCCcCC--HHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 888888876542 11 11 122233334444567788999999998744
No 189
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=40.62 E-value=29 Score=32.14 Aligned_cols=62 Identities=16% Similarity=0.127 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCC
Q 005965 360 YEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGP 422 (667)
.+.|.+.+++|++.++. +.+.-|..++.... ..+.++.. ...|.+|++.|.++||++.||--
T Consensus 75 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~-~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 138 (254)
T 3ayv_A 75 LRRLLFGLDRAAELGADRAVFHSGIPHGRTPE-EALERALPLAEALGLVVRRARTLGVRLLLENS 138 (254)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCTTCCHH-HHHHTHHHHHHHTHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCcccccc-cHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCC
Confidence 57899999999999864 22322222321100 11222322 34578899999999999999963
No 190
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=40.54 E-value=20 Score=37.08 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCEEEEeccc----cccccccccCcccCccccccHHHHHHHHHcCCcCchh--hhHHHHHHHHhHhc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGV----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY--EHWDEILDICNQYD 374 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY--e~FD~ileI~k~YD 374 (667)
.++-+++.-...|+..+.||-|. .-+.++++..-+-+|..+||++| -..+-+|+- +.++++.+.+++|+
T Consensus 19 air~vv~~a~~~g~~v~Gi~~G~~GL~~~~~~~l~~~~v~~i~~~GGt~L-----GssR~~~~~~~~~~~~~~~~l~~~~ 93 (319)
T 1zxx_A 19 AVRAVTRVAIANGLEVFGIRYGFAGLVAGDIFPLESEDVAHLINVSGTFL-----YSARYPEFAEEEGQLAGIEQLKKHG 93 (319)
T ss_dssp HHHHHHHHHHTTTCEEEEECTHHHHHHHTCEEECCGGGGTTCTTCCSCTT-----CCCCCGGGTSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCEEEEEccChHHHcCCCEEECCHHHHHhHHhCCCccc-----ccCCCCccCCHHHHHHHHHHHHHhC
Confidence 35566666667899999999886 34566677778999999999975 455666643 47999999999998
Q ss_pred ee--Eec-cCC
Q 005965 375 VA--LSI-GDG 382 (667)
Q Consensus 375 Vt--lSL-GDG 382 (667)
+. +-+ |||
T Consensus 94 Id~LvvIGGdg 104 (319)
T 1zxx_A 94 IDAVVVIGGDG 104 (319)
T ss_dssp CCEEEEEECHH
T ss_pred CCEEEEECCch
Confidence 64 344 554
No 191
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=40.48 E-value=3.3e+02 Score=28.17 Aligned_cols=198 Identities=13% Similarity=0.046 Sum_probs=105.1
Q ss_pred HHHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHH-
Q 005965 165 YYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKV- 243 (667)
Q Consensus 165 ~~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl- 243 (667)
..|+.++-..----.++..|++.-.+.- |+ ..-++.++++||.+- ..+.++=++++
T Consensus 92 ~~A~said~ALwDl~gK~~g~Pv~~LLG----g~------------------~r~~v~~y~s~~g~~-~~~~e~~~~~a~ 148 (393)
T 4dwd_A 92 TAALAACDIALWDLKGKLLGQPIYKLLG----GA------------------WRTRLPCYSSIGGNA-ARSVDEVVREVA 148 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSBHHHHTT----CC------------------SCSEEEEEEEECCCS-SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHcC----CC------------------CCCceeeEEecCccC-CCCHHHHHHHHH
Confidence 3566666555555567777776544432 21 033567778774321 23466666777
Q ss_pred HHHHHhCCcEeeecCCCC-------ChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 244 QWATMWGADTVMDLSTGR-------HIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 244 ~~A~~~GADtVMDLSTGg-------di~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
+.+++.|-.+| -|-.|. ++++-.+.|- |.. +| .+||. ..++ ...|.++....+.+-.+.|
T Consensus 149 ~~~~~~G~~~~-KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~---vDaN---~~~~~~~A~~~~~~L~~~~ 218 (393)
T 4dwd_A 149 RRVEAEQPAAV-KIRWDGDRTRCDVDIPGDIAKARAVREL---LGPDAVIG---FDAN---NGYSVGGAIRVGRALEDLG 218 (393)
T ss_dssp HHHHHHCCSEE-EEECCCCTTCCSCCHHHHHHHHHHHHHH---HCTTCCEE---EECT---TCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCEE-EEccCCCCcccccCHHHHHHHHHHHHHH---hCCCCeEE---EECC---CCCCHHHHHHHHHHHHhhC
Confidence 78888898776 455565 4443322221 110 00 11110 0122 2356677777776666778
Q ss_pred CCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh-hhHHHHHHHHhHhceeEeccCCCCC-------
Q 005965 314 VDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHWDEILDICNQYDVALSIGDGLRP------- 385 (667)
Q Consensus 314 VDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~FD~ileI~k~YDVtlSLGDGLRP------- 385 (667)
|+|+- -|+- .+++.+-++.++.++-+.+|..+.-
T Consensus 219 i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 260 (393)
T 4dwd_A 219 YSWFE--------------------------------------EPVQHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDL 260 (393)
T ss_dssp CSEEE--------------------------------------CCSCTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHH
T ss_pred CCEEE--------------------------------------CCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 88873 1332 3456666666777777766655431
Q ss_pred ---CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 386 ---GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 386 ---G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
| .|. -|...+.-|-..-+++..|.++|++||+-+.+ .-|-...-+|.-
T Consensus 261 i~~~--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~----~~i~~aa~~hla 313 (393)
T 4dwd_A 261 ILSG--VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQTQ----PGVGHFANIHVL 313 (393)
T ss_dssp HHHT--CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCCC----SSHHHHHHHHHH
T ss_pred HHcC--CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCCC----cHHHHHHHHHHH
Confidence 1 111 12222223333446777888999999976652 334444445544
No 192
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.22 E-value=1.8e+02 Score=27.20 Aligned_cols=87 Identities=16% Similarity=0.256 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
.+.+.|+.-++.|.|++-+...- + .++-.+..+++.+++++|++.++..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~----~---------------------------~~~~~~~~~~~~~~l~~~gl~i~~~ 66 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASP----L---------------------------PFYSDIQINELKACAHGNGITLTVG 66 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTT----G---------------------------GGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCcc----c---------------------------CCcCHHHHHHHHHHHHHcCCeEEEe
Confidence 35566777788899999887641 0 0123467899999999999999874
Q ss_pred CCCCCC-CccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEe
Q 005965 381 DGLRPG-SIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 381 DGLRPG-~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMI 419 (667)
-+.-++ .+. +.|....+ -+..+-+..+.|.+.|+.+++
T Consensus 67 ~~~~~~~~l~-~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 106 (294)
T 3vni_A 67 HGPSAEQNLS-SPDPDIRKNAKAFYTDLLKRLYKLDVHLIG 106 (294)
T ss_dssp ECCCGGGCTT-CSCHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred ecCCCCcCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 333221 232 23444443 345677888999999999985
No 193
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=39.82 E-value=1.1e+02 Score=29.64 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=14.4
Q ss_pred HHHHHHHHhHhceeEeccCCCC
Q 005965 363 WDEILDICNQYDVALSIGDGLR 384 (667)
Q Consensus 363 FD~ileI~k~YDVtlSLGDGLR 384 (667)
++.+-++.+..++.+-..=|+|
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~ 251 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVA 251 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCC
T ss_pred HHHHHHHHHhcCCCEEEECCcC
Confidence 4555667777788777665555
No 194
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=39.70 E-value=19 Score=41.39 Aligned_cols=80 Identities=20% Similarity=0.127 Sum_probs=61.9
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc---c--ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV---L--LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDE 365 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv---~--~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ 365 (667)
||+.--|+. .++.+++.-...|...+.||-|. . -...+++..-+-+|.++||++| -..+-+|+.+.+++
T Consensus 402 GGdapGmNa-aIravv~~a~~~g~~v~Gi~~G~~GL~~~~~~~~l~~~~v~~i~~~GGt~L-----GTsR~~~~~~~~~~ 475 (766)
T 3o8o_B 402 GAPAGGINS-AVYSMATYCMSQGHRPYAIYNGWSGLARHESVRSLNWKDMLGWQSRGGSEI-----GTNRVTPEEADLGM 475 (766)
T ss_dssp SSCCTTHHH-HHHHHHHHHHHHTCEEEEETTHHHHHHHHCCEEECCGGGGTTGGGCCSCTT-----CCCCCCGGGGCHHH
T ss_pred CCCcHHHHH-HHHHHHHHHHHCCCEEEEEecChHhhCCCCceEECCHHHHhhHhhCCCceE-----ccCCCCCccchHHH
Confidence 666666654 45666666667899999999876 2 2455677788999999999975 45677888788999
Q ss_pred HHHHHhHhcee
Q 005965 366 ILDICNQYDVA 376 (667)
Q Consensus 366 ileI~k~YDVt 376 (667)
+.+.+++|++.
T Consensus 476 ~~~~l~~~~Id 486 (766)
T 3o8o_B 476 IAYYFQKYEFD 486 (766)
T ss_dssp HHHHHHHHTCS
T ss_pred HHHHHHHhCCC
Confidence 99999999864
No 195
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=39.68 E-value=2.8e+02 Score=27.98 Aligned_cols=63 Identities=22% Similarity=0.102 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV 375 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV 375 (667)
.++.+++.+.+..-.+.||||+.+|.|... + ... . .-|-| ..+.+-+|.+.+++
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~---~--~~~-----~---------------~~~~~-~~~~~~~ir~~~~i 278 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALV---H--ADI-----N---------------VFPGY-QVSFAEKIREQADM 278 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSS---C--CCC-----C---------------CCTTT-THHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccc---c--CCC-----C---------------CCccc-hHHHHHHHHHHCCC
Confidence 467888888888888899999999987321 0 000 0 01111 35667778888899
Q ss_pred eEeccCCCC
Q 005965 376 ALSIGDGLR 384 (667)
Q Consensus 376 tlSLGDGLR 384 (667)
.+-.+-|++
T Consensus 279 PVi~~Ggi~ 287 (338)
T 1z41_A 279 ATGAVGMIT 287 (338)
T ss_dssp EEEECSSCC
T ss_pred CEEEECCCC
Confidence 998876665
No 196
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=39.53 E-value=1.6e+02 Score=29.79 Aligned_cols=164 Identities=9% Similarity=0.036 Sum_probs=84.9
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENL 297 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~l 297 (667)
+.+++.+|- .+.++-+++++.+++.|-.+| .+-.|.++++-.+.+- |.. +| .++|. ..++ ...
T Consensus 130 v~~~~~~~~----~~~~~~~~~a~~~~~~G~~~~-K~K~G~~~~~d~~~v~avR~~---~g~~~~l~---vDan---~~~ 195 (356)
T 3ro6_B 130 LPTSVTIGI----KPVEETLAEAREHLALGFRVL-KVKLCGDEEQDFERLRRLHET---LAGRAVVR---VDPN---QSY 195 (356)
T ss_dssp EEBCEEECS----CCHHHHHHHHHHHHHTTCCEE-EEECCSCHHHHHHHHHHHHHH---HTTSSEEE---EECT---TCC
T ss_pred eeeeEEEcC----CCHHHHHHHHHHHHHcCCCEE-EEEeCCCHHHHHHHHHHHHHH---hCCCCEEE---EeCC---CCC
Confidence 445555553 367777888888899997664 6777776544332221 110 00 11110 0112 234
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh-hhHHHHHHHHhHhcee
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHWDEILDICNQYDVA 376 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~FD~ileI~k~YDVt 376 (667)
|.++..+.+.+-.+.|++|+- =|+. .+++.+-++.++.++-
T Consensus 196 ~~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~iP 237 (356)
T 3ro6_B 196 DRDGLLRLDRLVQELGIEFIE--------------------------------------QPFPAGRTDWLRALPKAIRRR 237 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCCEE--------------------------------------CCSCTTCHHHHHTSCHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCEEE--------------------------------------CCCCCCcHHHHHHHHhcCCCC
Confidence 566666666666667888873 2332 2455555555556666
Q ss_pred EeccCCCCC----------CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 377 LSIGDGLRP----------GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 377 lSLGDGLRP----------G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
+.+|..+.- |.-.|. -|..++.-|...-++++.|.++|++||+-+. .-.-|-...-+|.-
T Consensus 238 Ia~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~---~es~i~~aa~~hla 309 (356)
T 3ro6_B 238 IAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCM---DESRISIAAALHAA 309 (356)
T ss_dssp EEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECCC---SCCHHHHHHHHHHH
T ss_pred EEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecCC---cccHHHHHHHHHHH
Confidence 666544321 000000 1222322334444778889999999998332 22334444444444
No 197
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=39.45 E-value=3.2e+02 Score=27.66 Aligned_cols=65 Identities=9% Similarity=0.073 Sum_probs=43.7
Q ss_pred hhhHHHHHHHHhHhceeEe-ccCCC------CCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 360 YEHWDEILDICNQYDVALS-IGDGL------RPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlS-LGDGL------RPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
.+..+++.+.++++++.++ +.=.+ ..|.+.+....-.=.-+..+-+..+.|.+.|+.+++=.||+
T Consensus 68 ~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~ 139 (387)
T 1bxb_A 68 DQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGR 139 (387)
T ss_dssp HHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 3678999999999999984 44333 23455543332112234456678888889999999877764
No 198
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=39.04 E-value=25 Score=36.36 Aligned_cols=85 Identities=16% Similarity=0.241 Sum_probs=60.0
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc----cccccccccCcccCccccccHHHHHHHHHcCCcCchh--hhHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY--EHWD 364 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY--e~FD 364 (667)
||+.--|+. .++-+++.-...|...+.||-|. .-+.++++..-+-+|..+||++| -..+-+|+- +.++
T Consensus 11 GGdapGmNa-air~vv~~a~~~g~~v~Gi~~G~~GL~~~~~~~l~~~~v~~i~~~GGt~L-----GssR~~~~~~~~~~~ 84 (320)
T 1pfk_A 11 GGDAPGMNA-AIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFL-----GSARFPEFRDENIRA 84 (320)
T ss_dssp SSCCTTHHH-HHHHHHHHHHHTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSCTT-----CCCCCGGGGSHHHHH
T ss_pred CCCchhHHH-HHHHHHHHHHHCCCEEEEEecChHHhcCCCEEECCHHHHhhHHhCCCCee-----ccCCCCCCCCHHHHH
Confidence 343333332 34556666557899999999886 44566677778999999999975 456666643 4689
Q ss_pred HHHHHHhHhcee--Eec-cC
Q 005965 365 EILDICNQYDVA--LSI-GD 381 (667)
Q Consensus 365 ~ileI~k~YDVt--lSL-GD 381 (667)
++.+.+++|++. +-+ ||
T Consensus 85 ~~~~~l~~~~Id~LvvIGGd 104 (320)
T 1pfk_A 85 VAIENLKKRGIDALVVIGGD 104 (320)
T ss_dssp HHHHHHHHTTCCEEEEEECH
T ss_pred HHHHHHHHcCCCEEEEECCC
Confidence 999999999853 444 45
No 199
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=38.87 E-value=20 Score=34.94 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=24.1
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV 254 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV 254 (667)
++.||..+| -|.+..++++|++.+ .+.|+|.+
T Consensus 4 ~~~~i~pSi-la~D~~~l~~~i~~~---~~~g~d~i 35 (227)
T 1tqx_A 4 LKAIIAPSV-LASNISKLAEETQRM---ESLGAEWI 35 (227)
T ss_dssp CCCEEEEBG-GGSCGGGHHHHHHHH---HHTTCSEE
T ss_pred CCCeEEeeh-hcCChhhHHHHHHHH---HHcCCCEE
Confidence 456777777 467778899988776 56799974
No 200
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=38.54 E-value=88 Score=30.77 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=50.5
Q ss_pred HHHHHH-HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCC
Q 005965 237 EEEVYK-VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVD 315 (667)
Q Consensus 237 eeEveK-l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVD 315 (667)
.+++.+ .+.|.+.|||-|= .|+.++++.+|+.. +.+++ +|+.-+ ||. ..=|.+++++.+....+.|++
T Consensus 158 ~~~i~~a~~~a~~~GAD~vk-t~~~~~~e~~~~~~-~~~~~----~pV~as----GGi-~~~~~~~~l~~i~~~~~aGA~ 226 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMK-IKYTGDPKTFSWAV-KVAGK----VPVLMS----GGP-KTKTEEDFLKQVEGVLEAGAL 226 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEE-EECCSSHHHHHHHH-HHTTT----SCEEEE----CCS-CCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEE-EcCCCCHHHHHHHH-HhCCC----CeEEEE----eCC-CCCCHHHHHHHHHHHHHcCCe
Confidence 457777 4899999999864 66666787777644 44443 454332 443 323799999999999999999
Q ss_pred EEEE
Q 005965 316 YFTI 319 (667)
Q Consensus 316 fmTI 319 (667)
.+.+
T Consensus 227 Gvsv 230 (263)
T 1w8s_A 227 GIAV 230 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 201
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=38.24 E-value=67 Score=33.41 Aligned_cols=29 Identities=17% Similarity=0.143 Sum_probs=24.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
-+++++++.+..+.-.+.|+|++++|...
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt 257 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTT 257 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCB
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 46788888888888788999999999764
No 202
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=37.94 E-value=1e+02 Score=27.11 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+..++.|++..+.|- =+-|||. . | +||-|++.++|++....- .+++.++.+++.
T Consensus 72 ~~~~~fi~~~~~~~~-~VlVHC~---------~----G-~~RS~~vv~ayLm~~~~~-----~~~~A~~~v~~~ 125 (155)
T 2hxp_A 72 PEAIEFIDEALSQNC-GVLVHSL---------A----G-VSRSVTVTVAYLMQKLHL-----SLNDAYDLVKRK 125 (155)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECS---------S----S-SSHHHHHHHHHHHHHHTC-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-cEEEECC---------C----C-CchhHHHHHHHHHHHcCC-----CHHHHHHHHHHH
Confidence 445556666555553 3669993 1 3 499999999998875432 567788877765
No 203
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=37.79 E-value=97 Score=28.55 Aligned_cols=174 Identities=16% Similarity=0.092 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCc-ccchh-hhHHHHhcCCCCCCCHHHHHHHHHHHHhc
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPV-GTVPI-YQALEKVDGIAENLSWEVFRDTLIEQAEQ 312 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPV-GTVPI-YqAl~k~~g~~~~lt~e~~~d~ieeQAeq 312 (667)
+.+.-.+-++.+.+.|++.|.-. ..+.++ .|.+.+.+|+ |.+.. |. . .+-...-+ .+.+++-.+.
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~----~~~~i~-~i~~~~~~pv~~~~~~~~~---~-~~~~i~~~----~~~i~~~~~~ 87 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRAN----TKEDIL-AIKETVDLPVIGIVKRDYD---H-SDVFITAT----SKEVDELIES 87 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE----SHHHHH-HHHHHCCSCEEEECBCCCT---T-CCCCBSCS----HHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeeeccC----CHHHHH-HHHHhcCCCEEeeeccCCC---c-cccccCCc----HHHHHHHHhC
Confidence 44555556677789999988532 233322 3444556665 21110 00 0 01111112 2445556788
Q ss_pred CCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh--ceeEeccCCCCCCCccC
Q 005965 313 GVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY--DVALSIGDGLRPGSIYD 390 (667)
Q Consensus 313 GVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y--DVtlSLGDGLRPG~iaD 390 (667)
|+|++++|... .++|- +.+.++++-++++ +..+.+ |
T Consensus 88 Gad~v~l~~~~-------------------------------~~~p~-~~~~~~i~~~~~~~~~~~v~~----------~ 125 (223)
T 1y0e_A 88 QCEVIALDATL-------------------------------QQRPK-ETLDELVSYIRTHAPNVEIMA----------D 125 (223)
T ss_dssp TCSEEEEECSC-------------------------------SCCSS-SCHHHHHHHHHHHCTTSEEEE----------E
T ss_pred CCCEEEEeeec-------------------------------ccCcc-cCHHHHHHHHHHhCCCceEEe----------c
Confidence 99999999832 12232 3446788888877 766532 1
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhcCCeEEeeC-CCCCC----CCchHHHHHHHHHhcC--CCCccccCccccccCCCchhH
Q 005965 391 ANDTAQFAELLTQGELTRRAWDKDVQVMNEG-PGHIP----MHKIPENMQKQLEWCN--EAPFYTLGPLTTDIAPGYDHI 463 (667)
Q Consensus 391 A~D~AQ~~EL~~LGEL~krA~e~gVQVMIEG-PGHVP----l~~I~~Nv~lqk~lC~--~APfYvLGPLvTDIApGYDHI 463 (667)
..+ .-| ++++++.|+....=+ +|+-. ...-..++++-++++. +.|+..-|=+. ..+++
T Consensus 126 ~~t---------~~e-~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~-----~~~~~ 190 (223)
T 1y0e_A 126 IAT---------VEE-AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVI-----TPDMY 190 (223)
T ss_dssp CSS---------HHH-HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCC-----SHHHH
T ss_pred CCC---------HHH-HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCC-----CHHHH
Confidence 122 112 345888898755433 34422 1113445555555543 45666555432 23555
Q ss_pred HHhHHHHHhhhcccceeeecC
Q 005965 464 TSAIGAANIGALGTALLCYVT 484 (667)
Q Consensus 464 tsAIGaA~aa~~GadfLCYVT 484 (667)
..++- +|||.+.--|
T Consensus 191 ~~~~~------~Gad~v~vG~ 205 (223)
T 1y0e_A 191 KRVMD------LGVHCSVVGG 205 (223)
T ss_dssp HHHHH------TTCSEEEECH
T ss_pred HHHHH------cCCCEEEECh
Confidence 54432 3777666544
No 204
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=37.62 E-value=3.6e+02 Score=27.72 Aligned_cols=156 Identities=15% Similarity=0.111 Sum_probs=89.4
Q ss_pred eeEeecc-ccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCC
Q 005965 221 VKVNANI-GNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAEN 296 (667)
Q Consensus 221 tKVNANI-GtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~ 296 (667)
+.+++.+ |- ..+.++=.++++.+.+.|.++| .|-.|.++++-.+.|- |.. +| .+||. ..++ ..
T Consensus 139 v~~y~~~~~~---~~~~e~~~~~a~~~~~~G~~~i-KiKvG~~~~~d~~~v~avR~a---~g~d~~l~---vDan---~~ 205 (389)
T 3ozy_A 139 VRAYASSIYW---DLTPDQAADELAGWVEQGFTAA-KLKVGRAPRKDAANLRAMRQR---VGADVEIL---VDAN---QS 205 (389)
T ss_dssp EEEEEEEECS---SCCHHHHHHHHHHHHHTTCSEE-EEECCSCHHHHHHHHHHHHHH---HCTTSEEE---EECT---TC
T ss_pred eeeEEecCCC---CCCHHHHHHHHHHHHHCCCCEE-eeccCCCHHHHHHHHHHHHHH---cCCCceEE---EECC---CC
Confidence 5566665 42 3456666778888889997765 6777766554433221 110 11 12221 1223 24
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHH-hHhc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDIC-NQYD 374 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~-k~YD 374 (667)
.|.++..+.+..-.+.||+|+- -|+ ..+++.+-++. ++.+
T Consensus 206 ~~~~~A~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~~ 247 (389)
T 3ozy_A 206 LGRHDALAMLRILDEAGCYWFE--------------------------------------EPLSIDDIEGHRILRAQGTP 247 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE--------------------------------------SCSCTTCHHHHHHHHTTCCS
T ss_pred cCHHHHHHHHHHHHhcCCCEEE--------------------------------------CCCCcccHHHHHHHHhcCCC
Confidence 5677777777766677999872 122 13566667777 6777
Q ss_pred eeEeccCCCCCCCccCCCcHHHHHHHH-------------------HHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHH
Q 005965 375 VALSIGDGLRPGSIYDANDTAQFAELL-------------------TQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQ 435 (667)
Q Consensus 375 VtlSLGDGLRPG~iaDA~D~AQ~~EL~-------------------~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~ 435 (667)
+-+.+|..+. +..++.+++ ..-+++..|.++|++||+ |....-|-...-
T Consensus 248 iPIa~dE~i~--------~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~----h~~~~~i~~aa~ 315 (389)
T 3ozy_A 248 VRIATGENLY--------TRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNP----HTFNDIITVAAN 315 (389)
T ss_dssp SEEEECTTCC--------HHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECC----CCTTSHHHHHHH
T ss_pred CCEEeCCCCC--------CHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe----cCCCcHHHHHHH
Confidence 7777765542 233333333 233677788999999996 343344544444
Q ss_pred HHHH
Q 005965 436 KQLE 439 (667)
Q Consensus 436 lqk~ 439 (667)
+|.-
T Consensus 316 ~hla 319 (389)
T 3ozy_A 316 LHLV 319 (389)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 205
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=37.32 E-value=48 Score=30.26 Aligned_cols=66 Identities=18% Similarity=0.078 Sum_probs=38.2
Q ss_pred HHHHHHhCCcEee-ecCCC-CChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCC-CHHHHHHHHHHHHhcCCCEEEE
Q 005965 243 VQWATMWGADTVM-DLSTG-RHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENL-SWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 243 l~~A~~~GADtVM-DLSTG-gdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l-t~e~~~d~ieeQAeqGVDfmTI 319 (667)
++.|.++|||-|. .+..+ ..+.++|+.+-+. .+++|- . +..+ |++.-.+.+. +.|+||+.+
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~-g~~~gv-~-----------~~s~~~p~~~~~~~~---~~g~d~v~~ 133 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAH-NKGVVV-D-----------LIGIEDKATRAQEVR---ALGAKFVEM 133 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEE-E-----------CTTCSSHHHHHHHHH---HTTCSEEEE
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHc-CCceEE-E-----------EecCCChHHHHHHHH---HhCCCEEEE
Confidence 3678899999774 34444 5677777766543 222321 1 1122 4444333332 458999988
Q ss_pred ecccc
Q 005965 320 HAGVL 324 (667)
Q Consensus 320 HaGv~ 324 (667)
|.+++
T Consensus 134 ~~~~~ 138 (207)
T 3ajx_A 134 HAGLD 138 (207)
T ss_dssp ECCHH
T ss_pred Eeccc
Confidence 88775
No 206
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=37.27 E-value=18 Score=42.72 Aligned_cols=80 Identities=15% Similarity=0.075 Sum_probs=61.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc---c--ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV---L--LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDE 365 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv---~--~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ 365 (667)
||+.--|+. .++.+++.-...|...+.||-|. . -+.++++..-+-||..+||++| -..+-+|+-+.+++
T Consensus 580 GGdapGmNa-aIravv~~a~~~g~~V~Gi~~G~~GL~~~~~~~~L~~~~V~~i~~~GGTiL-----GTsR~~~~~~~~~~ 653 (941)
T 3opy_B 580 GAPAGGMNS-AVYSMATYCMSRGHVPYAIHNGFSGLARHESVRSINWLDIEGWGSLGGSEI-----GTNRTLPNDADIGM 653 (941)
T ss_dssp SSCCTTHHH-HHHHHHHHHHHHTCEEEEETTHHHHHHHHCCEEECCTTTTTTGGGCCSCSS-----CEECCCTTTSCHHH
T ss_pred CCCcHHHHH-HHHHHHHHHHHCCCEEEEEccchHhhCcCCcEEECCHHHHhChhhCCCcEe-----ccCCCCcccchHHH
Confidence 444444443 46667776677899999999876 2 4566777888999999999976 44566777678999
Q ss_pred HHHHHhHhcee
Q 005965 366 ILDICNQYDVA 376 (667)
Q Consensus 366 ileI~k~YDVt 376 (667)
+.+.+++|++.
T Consensus 654 i~~~l~~~~Id 664 (941)
T 3opy_B 654 IAYFFEKYGFD 664 (941)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCC
Confidence 99999999864
No 207
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=37.24 E-value=1.9e+02 Score=29.60 Aligned_cols=27 Identities=4% Similarity=-0.156 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
..+.+.|.+..++-.++|.+.+-||.|
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g 173 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPM 173 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccC
Confidence 468899999999999999999999988
No 208
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=37.13 E-value=1.3e+02 Score=30.76 Aligned_cols=111 Identities=9% Similarity=0.030 Sum_probs=60.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH---
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ--- 372 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~--- 372 (667)
..+.++|.+..++-.++|.+.+-||.|-- ++....+|. ..|||.. |.+=... ++++-+|+
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~--~~g~~~~~~----~~gg~~~----------~~~~~~~-e~v~avr~a~G 197 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQ--RVGSALQHV----TRRSMSA----------EAIELAY-RRVKAVRDAAG 197 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCE--EETTEEECC----BTTBCCH----------HHHHHHH-HHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccc--ccccccccc----ccCCcch----------hhHHHHH-HHHHHHHHhcC
Confidence 35889999999999999999999997621 110000111 3344421 1111111 22333333
Q ss_pred hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 373 YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 373 YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
.|+.|.+ |+|..-...|.+.+ .++..++|+. +||-| +|-+.++.--++.++
T Consensus 198 ~d~~l~v----------D~n~~~~~~~a~~~---~~~l~~~~i~-~iE~P--~~~~~~~~~~~l~~~ 248 (392)
T 2poz_A 198 PEIELMV----------DLSGGLTTDETIRF---CRKIGELDIC-FVEEP--CDPFDNGALKVISEQ 248 (392)
T ss_dssp TTSEEEE----------ECTTCSCHHHHHHH---HHHHGGGCEE-EEECC--SCTTCHHHHHHHHHH
T ss_pred CCCEEEE----------ECCCCCCHHHHHHH---HHHHHhcCCC-EEECC--CCcccHHHHHHHHhh
Confidence 3666665 55543334454433 4445567875 78988 566677665555554
No 209
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=36.84 E-value=78 Score=32.90 Aligned_cols=166 Identities=16% Similarity=0.136 Sum_probs=87.4
Q ss_pred HHHHHHHHH-HhCCcEeeecCCCCChHHH-----HHHHHhcCCCCcccchhhhH-----HH-HhcCCCCCCCHHHHHHHH
Q 005965 239 EVYKVQWAT-MWGADTVMDLSTGRHIHET-----REWILRNSAVPVGTVPIYQA-----LE-KVDGIAENLSWEVFRDTL 306 (667)
Q Consensus 239 EveKl~~A~-~~GADtVMDLSTGgdi~~~-----R~~Il~nspvPVGTVPIYqA-----l~-k~~g~~~~lt~e~~~d~i 306 (667)
-++|+..|+ +.|+-.++-|.-+|-.... -...+.-|++|....++|-. .. .....+..||.+++-+++
T Consensus 86 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i 165 (377)
T 2r14_A 86 GWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIV 165 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHH
T ss_pred HHHHHHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHH
Confidence 466766554 5788889999866521100 00112223333210011100 00 001346788888887777
Q ss_pred HHH-------HhcCCCEEEEeccc---ccccc-ccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce
Q 005965 307 IEQ-------AEQGVDYFTIHAGV---LLRYI-PLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV 375 (667)
Q Consensus 307 eeQ-------AeqGVDfmTIHaGv---~~~~l-~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV 375 (667)
+.- .+.|.|.+-||+|- .-+.+ |.+..|.- .-|||+.- +-.++.+-.+.+.+-+-.-.|
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D---~yGGslen-------R~r~~~eiv~aVr~avg~~~v 235 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTD---QYGGSIEN-------RARFPLEVVDAVAEVFGPERV 235 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCS---TTSSSHHH-------HHHHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCC---ccCcchhh-------chHHHHHHHHHHHHHcCCCcE
Confidence 654 35799999999862 22333 23334432 46899643 334567777777776642245
Q ss_pred eE--eccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 376 AL--SIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 376 tl--SLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
.+ |.+|.+ .| +.|..+.. ...+|++++.++||..+--..
T Consensus 236 ~vrls~~~~~-~~-~~~~~~~~------~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 236 GIRLTPFLEL-FG-LTDDEPEA------MAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp EEEECTTCCC-TT-CCCSCHHH------HHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEecccccc-CC-CCCCCCHH------HHHHHHHHHHHcCCCEEEEeC
Confidence 44 444333 12 23333332 345677888889998665443
No 210
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=36.73 E-value=50 Score=33.72 Aligned_cols=37 Identities=27% Similarity=0.169 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCcEeeec--------CCCC-----ChHHHHHHHHhcCCCCc
Q 005965 241 YKVQWATMWGADTVMDL--------STGR-----HIHETREWILRNSAVPV 278 (667)
Q Consensus 241 eKl~~A~~~GADtVMDL--------STGg-----di~~~R~~Il~nspvPV 278 (667)
+-++.+.+.|||.||=| ..|| +++-+|+ |-+.+.+||
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~-i~~~v~iPv 81 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEE-IRKCISINV 81 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHH-HHTTCCSEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHH-HHHhcCCCE
Confidence 44789999999999999 4666 7777765 555565555
No 211
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=36.69 E-value=2.1e+02 Score=26.53 Aligned_cols=117 Identities=18% Similarity=0.203 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCE--EEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 296 NLSWEVFRDTLIEQAEQGVDY--FTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDf--mTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+++.+.+.+.-+.-.+.|+.+ +++|+.... .+.|.-...-. -..++|.+.+++|++.
T Consensus 43 ~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~-----------~~~~~~~~~r~----------~~~~~~~~~i~~A~~l 101 (287)
T 2x7v_A 43 LPSDEAATKFKREMKKHGIDWENAFCHSGYLI-----------NLASPKDDIWQ----------KSVELLKKEVEICRKL 101 (287)
T ss_dssp CCCHHHHHHHHHHHHHHTCCGGGEEEECCTTC-----------CTTCSSHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcceeEEeccccc-----------ccCCCCHHHHH----------HHHHHHHHHHHHHHHc
Confidence 344444444444445579986 888986321 12221111111 1357899999999999
Q ss_pred cee-EeccCCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCC---CCCchHHHHHHHHH
Q 005965 374 DVA-LSIGDGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGHI---PMHKIPENMQKQLE 439 (667)
Q Consensus 374 DVt-lSLGDGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHV---Pl~~I~~Nv~lqk~ 439 (667)
++. +.+.-|..++ ...+..+.. ...|.+|.+++ +||.+.+|--... -.+..++-.++-.+
T Consensus 102 G~~~v~~~~g~~~~----~~~~~~~~~~~~~l~~l~~~~--~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 166 (287)
T 2x7v_A 102 GIRYLNIHPGSHLG----TGEEEGIDRIVRGLNEVLNNT--EGVVILLENVSQKGGNIGYKLEQLKKIRDL 166 (287)
T ss_dssp TCCEEEECCEECTT----SCHHHHHHHHHHHHHHHHTTC--CSCEEEEECCCCCTTEECSSHHHHHHHHHH
T ss_pred CCCEEEEecCCCCC----CCHHHHHHHHHHHHHHHHccc--CCCEEEEeCCCCCCCccCCCHHHHHHHHHh
Confidence 874 2222222222 222333332 23455666443 8999999974221 12445544444444
No 212
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=36.69 E-value=1.3e+02 Score=30.29 Aligned_cols=80 Identities=14% Similarity=0.011 Sum_probs=44.5
Q ss_pred HHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCC-cccchhhhHHHHhcCC------CCCCCHHHHHHHHHHHHhcCC
Q 005965 242 KVQWATMWGADTVMDLSTGRHIHETREWILRNSAVP-VGTVPIYQALEKVDGI------AENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvP-VGTVPIYqAl~k~~g~------~~~lt~e~~~d~ieeQAeqGV 314 (667)
-+..+++.|.-||+|..+.......-+..++...++ ..-++....+.-.++. ...-+.+++.+.++++.+.|+
T Consensus 120 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 199 (458)
T 2p9b_A 120 NATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGV 199 (458)
T ss_dssp HHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEecccccccCCCCCccccCccCCCHHHHHHHHHHHHHcCC
Confidence 467789999999999865444444334444443321 1111100000000111 012356788888899899999
Q ss_pred CEEEEec
Q 005965 315 DYFTIHA 321 (667)
Q Consensus 315 DfmTIHa 321 (667)
+++-+.+
T Consensus 200 ~~ik~~~ 206 (458)
T 2p9b_A 200 NAIKIAA 206 (458)
T ss_dssp SCEEEEC
T ss_pred CEEEEEe
Confidence 9876654
No 213
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=36.67 E-value=91 Score=31.55 Aligned_cols=110 Identities=8% Similarity=-0.023 Sum_probs=60.0
Q ss_pred cCCCCCCC---HHHHHHHHHHHHhcCCCEEEEecccccc--c-cccccCcccCcc-ccccHHHHHHHHHcCCcCchh---
Q 005965 291 DGIAENLS---WEVFRDTLIEQAEQGVDYFTIHAGVLLR--Y-IPLTAKRMTGIV-SRGGSIHAKWCLAYHKENFAY--- 360 (667)
Q Consensus 291 ~g~~~~lt---~e~~~d~ieeQAeqGVDfmTIHaGv~~~--~-l~~~~~RvtgIV-SRGGSi~a~Wml~h~~ENpLY--- 360 (667)
.|....++ -++|...+.+-++.|+|-+.+|.|+.+. + .+...+. +|++ .--| ..|++
T Consensus 36 ~g~~~~~~~~~l~~~k~lv~~~~~~~~~avl~~~g~~~~a~~~~~~~~~~-~glil~l~~------------~~~l~~~~ 102 (304)
T 1to3_A 36 AGAKTPVADSVLTDFKVNAAKILSPYASAVLLDQQFCYRQAVEQNAVAKS-CAMIVAADD------------FIPGNGIP 102 (304)
T ss_dssp TTCCSSCCHHHHHHHHHHHHHHHGGGCSEEEECTTTTHHHHHHTTCSCTT-SEEEEECEE------------EEEETTEE
T ss_pred cCCCCCcccchhhhHHHHHHHHHhcCCCEEEeCHHHHHHHhhcccccCCC-CcEEEEECC------------CCCCCCCc
Confidence 35434444 3778888888899999999999999877 3 1212222 2222 2111 12221
Q ss_pred --h-hH--HHHHHHHhHhceeE-eccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 361 --E-HW--DEILDICNQYDVAL-SIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 361 --e-~F--D~ileI~k~YDVtl-SLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
. -+ +.-.|-+.+-.++. ++ -+..| .|.. + -+.+.++.++.+.|+++|+.+|||
T Consensus 103 ~~~~l~~~~~~ve~a~~~GAdaV~v--lv~~~--~d~~-~--~~~~~~i~~v~~~~~~~G~p~lv~ 161 (304)
T 1to3_A 103 VDNVVLDKKINAQAVKRDGAKALKL--LVLWR--SDED-A--QQRLNMVKEFNELCHSNGLLSIIE 161 (304)
T ss_dssp EEEEEECSSCCHHHHHHTTCCEEEE--EEEEC--TTSC-H--HHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cchhhccCchhHHHHHHcCCCEEEE--EEEcC--CCcc-H--HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 0 11 23334444444211 10 00011 1111 2 455667889999999999999999
No 214
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=36.34 E-value=83 Score=30.52 Aligned_cols=104 Identities=10% Similarity=-0.005 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
+.+.+++.++ +.|+...++|++..-..+..-..+..+-.++ ....-..++|++.+++|++.++..
T Consensus 60 ~~~~~~~~l~---~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~------------~~~~~~~~~~~~~i~~A~~lG~~~ 124 (303)
T 3l23_A 60 PMMDFKKMAE---DAGLKIISSHVNPVDTSISDPFKAMIFKYSK------------EVTPKIMEYWKATAADHAKLGCKY 124 (303)
T ss_dssp EHHHHHHHHH---HTTCEEEEEECCCBCTTCSSTTTTBCCSCCT------------TTHHHHHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHH---HcCCeEEEEecccccccccCcccccccccch------------hhHHHHHHHHHHHHHHHHHcCCCE
Confidence 4566666554 4799999999875211100000000000000 001234678999999999998743
Q ss_pred eccCCCCCCCccCCCcHHHHHHH-HHHHHHHHHHHhcCCe--EEeeC
Q 005965 378 SIGDGLRPGSIYDANDTAQFAEL-LTQGELTRRAWDKDVQ--VMNEG 421 (667)
Q Consensus 378 SLGDGLRPG~iaDA~D~AQ~~EL-~~LGEL~krA~e~gVQ--VMIEG 421 (667)
=..-+.-+ . .++.+++.+ ..|.+|++.|.++||+ +.+|-
T Consensus 125 v~~~~~~~----~-~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En 166 (303)
T 3l23_A 125 LIQPMMPT----I-TTHDEAKLVCDIFNQASDVIKAEGIATGFGYHN 166 (303)
T ss_dssp EEECSCCC----C-CSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred EEECCCCC----C-CCHHHHHHHHHHHHHHHHHHHHCCCcceEEEcc
Confidence 22212211 1 344555544 4689999999999999 99984
No 215
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=36.26 E-value=2e+02 Score=29.38 Aligned_cols=152 Identities=13% Similarity=0.144 Sum_probs=79.5
Q ss_pred HHHHHHhCCcEeeecCCC---CChH-HHHHHHHh---cCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHh-cCC
Q 005965 243 VQWATMWGADTVMDLSTG---RHIH-ETREWILR---NSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAE-QGV 314 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTG---gdi~-~~R~~Il~---nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAe-qGV 314 (667)
.+.|.+.|.-|++|.... .++. .++.+.-. .+.+.++. | +.+.+.+ +..++.+++.++ .|+
T Consensus 78 ~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~-------~~~~~~~-~~~~~~~~~l~~~~G~ 146 (461)
T 3sfw_A 78 TKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGF---H-------LMVSDAN-DHVLEELESVVNNEGI 146 (461)
T ss_dssp HHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEE---E-------EECSCCC-HHHHHHHHHHHHTSCC
T ss_pred HHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEE---E-------EEEeCCC-HHHHHHHHHHHHhCCC
Confidence 466789999999996442 2222 23322222 22222221 1 1122333 445677888888 899
Q ss_pred CEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCc------
Q 005965 315 DYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSI------ 388 (667)
Q Consensus 315 DfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~i------ 388 (667)
+.+.+...- . | . -..-.+.+.++++.+++|++.+.+= .+-..+
T Consensus 147 ~~ik~~~~~--------~----~------~-----------~~~~~~~l~~~~~~a~~~g~~v~~H--ae~~~~~~~~~~ 195 (461)
T 3sfw_A 147 TSLKVFMAY--------K----N------V-----------LMADDETLFKTLIRAKELGALVQVH--AENGDVLDYLTK 195 (461)
T ss_dssp CEEEEESSS--------T----T------T-----------TBCCHHHHHHHHHHHHHHTCEEEEE--CSCHHHHHHHHH
T ss_pred CEEEEEEec--------C----C------C-----------cccCHHHHHHHHHHHHhcCCEEEEE--cCCHHHHHHHHH
Confidence 887654321 0 0 0 0111345667888888888777652 110000
Q ss_pred ---cC--------CCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 389 ---YD--------ANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 389 ---aD--------A~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
++ ..-+...+|...+.++...|.+.|+.+.|- |+--.+--+-++..|+
T Consensus 196 ~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~---H~s~~~~l~~i~~ak~ 254 (461)
T 3sfw_A 196 QALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVV---HVSCADAVRRIAEARE 254 (461)
T ss_dssp HHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEEC---SCCSHHHHHHHHHHHH
T ss_pred HHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEE---ecCcHHHHHHHHHHHh
Confidence 00 001123367777778888888888888773 5554333334444444
No 216
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=36.22 E-value=1.5e+02 Score=29.53 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.+++.|++.+..+.-.+.|||++++|.+.
T Consensus 220 ~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 220 PDLSEEELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCc
Confidence 35788888888888888999999999764
No 217
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=36.19 E-value=51 Score=30.93 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
++..+.++.-.+.|+|++.++- ... +| .....+++.+-+|++++++.+-+
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d-~~~----------------~~-------------~~~~~~~~~i~~i~~~~~iPvi~ 80 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLD-ISA----------------TH-------------EERAILLDVVARVAERVFIPLTV 80 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEE-CCS----------------ST-------------TCHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEEc-CCc----------------cc-------------cCccccHHHHHHHHHhCCCCEEE
Confidence 4567777777889999988772 110 11 02345788899999999999999
Q ss_pred cCCCCC
Q 005965 380 GDGLRP 385 (667)
Q Consensus 380 GDGLRP 385 (667)
+.|+|.
T Consensus 81 ~Ggi~~ 86 (252)
T 1ka9_F 81 GGGVRS 86 (252)
T ss_dssp ESSCCS
T ss_pred ECCcCC
Confidence 999985
No 218
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=36.04 E-value=1.4e+02 Score=25.71 Aligned_cols=71 Identities=21% Similarity=0.206 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
+.+++.|++..++|- =+-|||. . | +||-|++.++|++....- .+++.++.+++.
T Consensus 70 ~~~~~~i~~~~~~~~-~VlVHC~---------~----G-~~RSg~~~~ayl~~~~~~-----~~~~a~~~v~~~------ 123 (149)
T 1zzw_A 70 EEAFEFIEEAHQCGK-GLLIHCQ---------A----G-VSRSATIVIAYLMKHTRM-----TMTDAYKFVKGK------ 123 (149)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECS---------S----S-SSHHHHHHHHHHHHHSCC-----CHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHcCC-eEEEECC---------C----C-CCHHHHHHHHHHHHHcCC-----CHHHHHHHHHHH------
Confidence 344555655555443 4669993 2 4 599999999998875432 577888877764
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHH
Q 005965 380 GDGLRPGSIYDANDTAQFAELLTQ 403 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~EL~~L 403 (667)
||+..- ...++..|...
T Consensus 124 ----R~~~~p---n~~f~~qL~~~ 140 (149)
T 1zzw_A 124 ----RPIISP---NLNFMGQLLEF 140 (149)
T ss_dssp ----CTTCCC---CHHHHHHHHHH
T ss_pred ----CCccCC---CHHHHHHHHHH
Confidence 676543 23355555444
No 219
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=36.03 E-value=1.4e+02 Score=27.13 Aligned_cols=90 Identities=10% Similarity=0.023 Sum_probs=52.0
Q ss_pred hhhHHHHHHHHhHhc-eeEecc--CCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhc-------CCeEEeeCCCCCC---
Q 005965 360 YEHWDEILDICNQYD-VALSIG--DGLRPGSIYDANDTAQFAELLTQGELTRRAWDK-------DVQVMNEGPGHIP--- 426 (667)
Q Consensus 360 Ye~FD~ileI~k~YD-VtlSLG--DGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~-------gVQVMIEGPGHVP--- 426 (667)
...|++++.-.+-.| |+|.|| |..+... .+..++.+ .|.+|+++++++ +.+|.+=+|=.+.
T Consensus 89 ~~~l~~~l~~~~p~d~VvI~~GtND~~~~~~----~~~~~~~~--~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~~~~ 162 (232)
T 3dci_A 89 ARALEVALSCHMPLDLVIIMLGTNDIKPVHG----GRAEAAVS--GMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGP 162 (232)
T ss_dssp HHHHHHHHHHHCSCSEEEEECCTTTTSGGGT----SSHHHHHH--HHHHHHHHHHHCCCSSTTCCCEEEEEECCCCCCCT
T ss_pred HHHHHHHHhhCCCCCEEEEEeccCCCccccC----CCHHHHHH--HHHHHHHHHHHhcccccCCCCeEEEEeCCCcCccc
Confidence 455666655444435 678888 6555421 24555543 577889999985 6888888775442
Q ss_pred ---C------CchHHHHHHHHHhcC--CCCccccCccccc
Q 005965 427 ---M------HKIPENMQKQLEWCN--EAPFYTLGPLTTD 455 (667)
Q Consensus 427 ---l------~~I~~Nv~lqk~lC~--~APfYvLGPLvTD 455 (667)
+ ..+...-+..+++|. +.||.=+..+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~iD~~~~~~~ 202 (232)
T 3dci_A 163 GGEPAGGRDIEQSMRLAPLYRKLAAELGHHFFDAGSVASA 202 (232)
T ss_dssp TSSCGGGCCHHHHTTHHHHHHHHHHHHTCEEEEGGGTCCC
T ss_pred CcccccccHHHHHHHHHHHHHHHHHHhCCeEEcchHhcCc
Confidence 1 123333344445553 5677655555443
No 220
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=35.97 E-value=19 Score=38.89 Aligned_cols=49 Identities=22% Similarity=0.210 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 360 YEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
.++.++|.+.+++++|.|++++|=+|+.+ -||++.|+..|.+++.=|=|
T Consensus 144 ~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~---------------~eLv~~a~~~G~~~v~~Gkg 192 (446)
T 3upl_A 144 VTIGPYLKAQADKQGVIYSLGAGDEPSSC---------------MELIEFVSALGYEVVSAGKG 192 (446)
T ss_dssp HHHHHHHHHHHHHHTCCEEECTTSHHHHH---------------HHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCeeeecCCcchHHH---------------HHHHHHHHhCCCeEEEeccC
Confidence 35789999999999999999997766543 37889999999999999855
No 221
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=35.90 E-value=1.4e+02 Score=29.43 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=43.3
Q ss_pred HHHHHHHhCCcEeeecCCCCChH-HHHHHHHhcCCCC----------c---c---c-chhhhHHHHhcCC-----CCCCC
Q 005965 242 KVQWATMWGADTVMDLSTGRHIH-ETREWILRNSAVP----------V---G---T-VPIYQALEKVDGI-----AENLS 298 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGgdi~-~~R~~Il~nspvP----------V---G---T-VPIYqAl~k~~g~-----~~~lt 298 (667)
-+..+++.|.-||.|..+..... .+|+ .++...++ + | . .|.|.- +. .+. ....+
T Consensus 98 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~-~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 174 (418)
T 2qs8_A 98 HAYVTFKSGFTTVRQVGDSGLVAISLRD-AINSGKLAGPRIFAAGKTIATTGGHADPTNGKAV-DD-YDYPVPEQGVVNG 174 (418)
T ss_dssp HHHHHHHTTEEEEEECCCSSSHHHHHHH-HHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCG-GG-CCCCCGGGTEECS
T ss_pred HHHHHHHcCCCEEEeCCCCccccHHHHH-HHHCCCCCCCeEEecCccccccCCCccccccccc-cc-cccccccccccCC
Confidence 46778999999999987644444 3444 33332110 0 0 0 111100 00 010 11345
Q ss_pred HHHHHHHHHHHHhcCCCEEEEec
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
.+++.+.++++.+.|+|++-+.+
T Consensus 175 ~~~~~~~~~~~~~~g~~~ik~~~ 197 (418)
T 2qs8_A 175 PYEVYAAVRQRYKDGADGIKITV 197 (418)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe
Confidence 67888888888889999877664
No 222
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.52 E-value=40 Score=34.46 Aligned_cols=154 Identities=15% Similarity=0.178 Sum_probs=88.4
Q ss_pred ChHHHHHHHHHHH-HhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHH---
Q 005965 235 SIEEEVYKVQWAT-MWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQA--- 310 (667)
Q Consensus 235 ~ieeEveKl~~A~-~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA--- 310 (667)
+.-+-++|+..|+ +.|+-.++-|.-.| |...- ..-|++--++.-. .....+..||.+++-++|+.-+
T Consensus 80 ~~i~~~~~~~~~vh~~G~~i~~QL~H~G-----r~~~~--~~~~~~pS~~~~~--~~~~~p~~mt~~eI~~ii~~f~~aA 150 (340)
T 3gr7_A 80 DHIAGLRELVGLVKEHGAAIGIQLAHAG-----RKSQV--PGEIIAPSAVPFD--DSSPTPKEMTKADIEETVQAFQNGA 150 (340)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECCG-----GGCCS--SSCCEESSSCCSS--TTSCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeccCC-----CccCC--CCCccCCCCcccc--CCCCCCccCCHHHHHHHHHHHHHHH
Confidence 4556788887777 57999999998776 21100 1122332222100 0123567899999988887643
Q ss_pred ----hcCCCEEEEeccc---cccccc-cccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce--eEecc
Q 005965 311 ----EQGVDYFTIHAGV---LLRYIP-LTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV--ALSIG 380 (667)
Q Consensus 311 ----eqGVDfmTIHaGv---~~~~l~-~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV--tlSLG 380 (667)
+.|.|.+-||+|- .-+.+. .+..|. . .-|||+.-. -.++.+-.+.+-+-+ .+-| -||..
T Consensus 151 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~-D--~yGGslenR-------~r~~~eiv~avr~~v-~~pv~vRls~~ 219 (340)
T 3gr7_A 151 RRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQ-D--EYGGSPENR-------YRFLGEVIDAVREVW-DGPLFVRISAS 219 (340)
T ss_dssp HHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCC-S--TTSSSHHHH-------HHHHHHHHHHHHHHC-CSCEEEEEESC
T ss_pred HHHHHcCCCEEEEccccchHHHHcCCCccCcCC-C--cccCCHHHH-------HHHHHHHHHHHHHhc-CCceEEEeccc
Confidence 4699999999872 223332 233343 3 569996532 235566666666555 3333 34555
Q ss_pred CCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 381 DGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 381 DGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
|-.. | ..+.. ...+|+++..++||...-
T Consensus 220 ~~~~-~----g~~~~------~~~~la~~L~~~Gvd~i~ 247 (340)
T 3gr7_A 220 DYHP-D----GLTAK------DYVPYAKRMKEQGVDLVD 247 (340)
T ss_dssp CCST-T----SCCGG------GHHHHHHHHHHTTCCEEE
T ss_pred cccC-C----CCCHH------HHHHHHHHHHHcCCCEEE
Confidence 4332 2 22222 234577778888988653
No 223
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=35.27 E-value=1.3e+02 Score=28.86 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=42.5
Q ss_pred hhHHHHHHHHhHhceeEeccCCCC-CCCccCCCcHHHH-HHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 361 EHWDEILDICNQYDVALSIGDGLR-PGSIYDANDTAQF-AELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLR-PG~iaDA~D~AQ~-~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
...+++.+++++|++.++..-++- ...+.+ .|.... .-+..+-+..+.|.+.|+.+++ +|
T Consensus 66 ~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~-~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~ 127 (309)
T 2hk0_A 66 AELATIRKSAKDNGIILTAGIGPSKTKNLSS-EDAAVRAAGKAFFERTLSNVAKLDIHTIG-GA 127 (309)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCSSSCSSC-SCHHHHHHHHHHHHHHHHHHHHTTCCEEE-EC
T ss_pred hhHHHHHHHHHHcCCeEEEecCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ee
Confidence 678999999999999998754432 223433 343333 2345677889999999999998 65
No 224
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=35.26 E-value=88 Score=33.59 Aligned_cols=30 Identities=17% Similarity=0.088 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+++.+++.+....-.+.|||++++|.+..
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 467888888888887889999999999864
No 225
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=35.08 E-value=93 Score=27.67 Aligned_cols=59 Identities=17% Similarity=0.248 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhHhc-eeEecc--CCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 361 EHWDEILDICNQYD-VALSIG--DGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 361 e~FD~ileI~k~YD-VtlSLG--DGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
.+|+++++--.+.| |+|++| |...++ ....+..++.+ .+.+++++++++|.+|++=+|-
T Consensus 61 ~~~~~~~~~~~~pd~vvi~~G~ND~~~~~--~~~~~~~~~~~--~l~~~i~~~~~~~~~vil~~~~ 122 (240)
T 3mil_A 61 KILPEILKHESNIVMATIFLGANDACSAG--PQSVPLPEFID--NIRQMVSLMKSYHIRPIIIGPG 122 (240)
T ss_dssp HHHHHHHHHCCCEEEEEEECCTTTTSSSS--TTCCCHHHHHH--HHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHhcccCCCCEEEEEeecCcCCccC--CCCCCHHHHHH--HHHHHHHHHHHcCCeEEEEcCC
Confidence 35555443223566 577888 554432 12233444543 4667788888888888887763
No 226
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=34.83 E-value=69 Score=32.84 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=51.1
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
.+++=++.++...++|||.|+=-+- .+.+++|+ +.+..++|+=-.++ . +|....+| .++-++.||
T Consensus 169 gldeai~Ra~ay~~AGAD~if~~~~-~~~ee~~~-~~~~~~~Pl~~n~~-----~-~g~tp~~~-------~~eL~~lGv 233 (298)
T 3eoo_A 169 GIDAAIERAIAYVEAGADMIFPEAM-KTLDDYRR-FKEAVKVPILANLT-----E-FGSTPLFT-------LDELKGANV 233 (298)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCC-CSHHHHHH-HHHHHCSCBEEECC-----T-TSSSCCCC-------HHHHHHTTC
T ss_pred CHHHHHHHHHhhHhcCCCEEEeCCC-CCHHHHHH-HHHHcCCCeEEEec-----c-CCCCCCCC-------HHHHHHcCC
Confidence 5889999999999999999985433 47888775 44555565521121 1 23333455 445567899
Q ss_pred CEEEEeccccccc
Q 005965 315 DYFTIHAGVLLRY 327 (667)
Q Consensus 315 DfmTIHaGv~~~~ 327 (667)
.++.+-....+..
T Consensus 234 ~~v~~~~~~~raa 246 (298)
T 3eoo_A 234 DIALYCCGAYRAM 246 (298)
T ss_dssp CEEEECSHHHHHH
T ss_pred eEEEEchHHHHHH
Confidence 9988766554433
No 227
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=34.79 E-value=1.4e+02 Score=26.89 Aligned_cols=54 Identities=20% Similarity=0.220 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+.+++.|++..++|- -+-|||. . | +||-|++.++|++....- .+++.++.+++.
T Consensus 74 ~~~~~~i~~~~~~~~-~VlVHC~---------a----G-~~RSg~~v~ayLm~~~~~-----~~~~A~~~v~~~ 127 (177)
T 2oud_A 74 EEAFEFIEEAHQCGK-GLLIHCQ---------A----G-VSRSATIVIAYLMKHTRM-----TMTDAYKFVKGK 127 (177)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECS---------S----S-SSHHHHHHHHHHHHTSCC-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cEEEEcC---------C----C-CCchHHHHHHHHHHHcCC-----CHHHHHHHHHHH
Confidence 344566666555553 4669993 2 4 599999999999875432 567777777764
No 228
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=34.67 E-value=1.2e+02 Score=31.02 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=58.6
Q ss_pred HHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 242 KVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 242 Kl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
-.+.|.+.|||-|===.|+..+ +++.+.+++||- -.||... +.+++++.+++..+.|++.+.+=-
T Consensus 194 aariA~elGAD~VKt~~t~e~~----~~vv~~~~vPVv---------~~GG~~~--~~~~~l~~v~~ai~aGA~Gv~vGR 258 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYVEKGF----ERIVAGCPVPIV---------IAGGKKL--PEREALEMCWQAIDQGASGVDMGR 258 (295)
T ss_dssp HHHHHHHTTCSEEEEECCTTTH----HHHHHTCSSCEE---------EECCSCC--CHHHHHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHhCCCEEEeCCCHHHH----HHHHHhCCCcEE---------EEECCCC--CHHHHHHHHHHHHHhCCeEEEeHH
Confidence 4678999999987544565444 445566765542 1255433 789999999999999999887655
Q ss_pred cccccccc-cccCcccCccccccHHHHHH
Q 005965 322 GVLLRYIP-LTAKRMTGIVSRGGSIHAKW 349 (667)
Q Consensus 322 Gv~~~~l~-~~~~RvtgIVSRGGSi~a~W 349 (667)
.|....=| .....+..||-.|-|.=.+|
T Consensus 259 nI~q~~dp~~~~~al~~ivh~~~s~~eA~ 287 (295)
T 3glc_A 259 NIFQSDHPVAMMKAVQAVVHHNETADRAY 287 (295)
T ss_dssp HHHTSSSHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHhcCcCHHHHHHHHHHHHhCCCCHHHHH
Confidence 55443222 12344555555555444443
No 229
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=34.62 E-value=84 Score=30.11 Aligned_cols=26 Identities=27% Similarity=0.201 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+.+.+.|+.-++-|+.++.+|.|..
T Consensus 110 ~~~~~~~i~~A~~lGa~~v~~~~g~~ 135 (340)
T 2zds_A 110 AAEIKDTARAAARLGVDTVIGFTGSA 135 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCc
Confidence 36778888888899999999999853
No 230
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=34.51 E-value=1.6e+02 Score=25.25 Aligned_cols=94 Identities=14% Similarity=0.245 Sum_probs=55.7
Q ss_pred HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.++|..+|.+|....+- + . ...+-.=.+|+.. ....++. ++..++.|++..++|= =+-|||.
T Consensus 26 ~~~gi~~Vi~l~~~~~~-----~-~-~~~~~~~~ipi~D------~~~~~l~~~~~~~~~fi~~~~~~~~-~VlVHC~-- 89 (145)
T 2nt2_A 26 QNRGVRYILNVTREIDN-----F-F-PGVFEYHNIRVYD------EEATDLLAYWNDTYKFISKAKKHGS-KCLVHSK-- 89 (145)
T ss_dssp HHTTEEEEEECCSSSCC-----S-C-BTTBEEEECCCCS------STTCCCGGGHHHHHHHHHHHHHTTC-EEEEECS--
T ss_pred HHCCCCEEEEeCCCCcc-----C-C-CCCcEEEEEEEeC------CCCCcHHHHHHHHHHHHHHHHHcCC-eEEEECC--
Confidence 57899999999875421 0 0 0001111234332 1123332 3566677777666653 3569994
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
.|+ ||-|+++++|++....- .+++.++..++.
T Consensus 90 -----------~G~-~RS~~~v~ayLm~~~~~-----~~~~A~~~v~~~ 121 (145)
T 2nt2_A 90 -----------MGV-SRSASTVIAYAMKEYGW-----NLDRAYDYVKER 121 (145)
T ss_dssp -----------SSS-SHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH
T ss_pred -----------CCC-chHHHHHHHHHHHHhCC-----CHHHHHHHHHHH
Confidence 244 99999999998875432 567777777764
No 231
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=34.40 E-value=2.9e+02 Score=25.79 Aligned_cols=122 Identities=13% Similarity=0.048 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
+.+.+.+.-+.-.+.|+.+..+|.... -.++.|.-...-.+ ..++|.+.+++|++.++..
T Consensus 45 ~~~~~~~~~~~l~~~gl~i~~~~~~~~----------~~~l~~~d~~~r~~----------~~~~~~~~i~~a~~lG~~~ 104 (294)
T 3vni_A 45 SDIQINELKACAHGNGITLTVGHGPSA----------EQNLSSPDPDIRKN----------AKAFYTDLLKRLYKLDVHL 104 (294)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCCG----------GGCTTCSCHHHHHH----------HHHHHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCC----------CcCCCCCCHHHHHH----------HHHHHHHHHHHHHHhCCCe
Confidence 444555555555678998877665311 12233322222211 2578999999999998755
Q ss_pred e---ccCCCCCCCcc-CCCcHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCCC---CCCCchHHHHHHHHHh
Q 005965 378 S---IGDGLRPGSIY-DANDTAQFAEL-LTQGELTRRAWDKDVQVMNEGPGH---IPMHKIPENMQKQLEW 440 (667)
Q Consensus 378 S---LGDGLRPG~ia-DA~D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPGH---VPl~~I~~Nv~lqk~l 440 (667)
= ++.|. |.... +...+.+++.+ ..|.+|.+.|.++||++.+|--++ -.++..++-.++-+++
T Consensus 105 v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 105 IGGALYSYW-PIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp EEESTTSCS-SCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred eeccccCCC-CCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHc
Confidence 4 44443 11111 12223344443 458899999999999999996432 2356667666666665
No 232
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=34.26 E-value=4e+02 Score=27.26 Aligned_cols=164 Identities=13% Similarity=0.094 Sum_probs=88.8
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcc-cchhhhHHHHhcCCCCCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVG-TVPIYQALEKVDGIAENLS 298 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVG-TVPIYqAl~k~~g~~~~lt 298 (667)
++.+++.+| ..+.++=+++++.+.+.|.++| .|-.|.++++-.+.|- ...=-+| .+||. .++++ ..|
T Consensus 134 ~v~~~~~~~----~~~~e~~~~~a~~~~~~G~~~i-KiK~G~~~~~d~~~v~-avR~a~g~~~~l~---vDan~---~~~ 201 (378)
T 3eez_A 134 PRPIASSVG----AKSVEETRAVIDRYRQRGYVAH-SVKIGGDVERDIARIR-DVEDIREPGEIVL---YDVNR---GWT 201 (378)
T ss_dssp CEEBBCCBC----SCCHHHHHHHHHHHHHTTCCEE-EEECCSCHHHHHHHHH-HHTTSCCTTCEEE---EECTT---CCC
T ss_pred eEEEEEEec----CCCHHHHHHHHHHHHhCCCCEE-EeccCCCHHHHHHHHH-HHHHHcCCCceEE---EECCC---CCC
Confidence 355566665 3467777778888889997665 7777877555433321 1111122 22321 12222 245
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
.++..+.+.+-.+.|+ |+ |-|+- +++.+-++.++.++-+.
T Consensus 202 ~~~a~~~~~~l~~~~i-~i--------------------------------------EqP~~-~~~~~~~l~~~~~iPIa 241 (378)
T 3eez_A 202 RQQALRVMRATEDLHV-MF--------------------------------------EQPGE-TLDDIAAIRPLHSAPVS 241 (378)
T ss_dssp HHHHHHHHHHTGGGTC-CE--------------------------------------ECCSS-SHHHHHHTGGGCCCCEE
T ss_pred HHHHHHHHHHhccCCe-EE--------------------------------------ecCCC-CHHHHHHHHhhCCCCEE
Confidence 5555555544444555 54 33554 67777777777777777
Q ss_pred ccCCCCCCCccC--------C-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHh
Q 005965 379 IGDGLRPGSIYD--------A-----NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEW 440 (667)
Q Consensus 379 LGDGLRPG~iaD--------A-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~l 440 (667)
+|..+.- ..| + -|...+.-+-..-+++..|.++|++||+-+ +.-.-|-...-+|.-.
T Consensus 242 ~dE~~~~--~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~---~~es~i~~aa~~hlaa 311 (378)
T 3eez_A 242 VDECLVT--LQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMA---TGGSVLADAEALHLAA 311 (378)
T ss_dssp ECTTCCS--HHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC---SSCSHHHHHHHHHHHH
T ss_pred ECCCCCC--HHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCC---CCCCHHHHHHHHHHHH
Confidence 7655431 000 0 122222233344467788999999999854 3323444444444443
No 233
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=34.05 E-value=2.2e+02 Score=25.16 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=54.5
Q ss_pred HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+.|..+|.||.+..+- ....+-.=.+|+.. ....++. .+..++.|++..++|- =+-|||.
T Consensus 29 ~~~gI~~Vi~l~~~~~~--------~~~~i~~~~ip~~D------~~~~~l~~~~~~~~~fi~~~~~~~~-~VlVHC~-- 91 (165)
T 1wrm_A 29 SKNKVTHILSVHDSARP--------MLEGVKYLCIPAAD------SPSQNLTRHFKESIKFIHECRLRGE-SCLVHCL-- 91 (165)
T ss_dssp HHTTEEEEEECSTTCCC--------CSTTCEEEECCCCS------STTSCCGGGHHHHHHHHHHHHHTTC-EEEEECS--
T ss_pred HHCCCcEEEEecCCCCC--------CCCCCeEEEEECCC------CCCccHHHHHHHHHHHHHHHHHCCC-eEEEECC--
Confidence 46899999999875421 00111111233322 1112332 3455666666555554 3459994
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
. | +||-|++.++|++....- .+++.++..++.
T Consensus 92 -------a----G-~~RSg~~~~ayLm~~~~~-----~~~~A~~~v~~~ 123 (165)
T 1wrm_A 92 -------A----G-VSRSVTLVIAYIMTVTDF-----GWEDALHTVRAG 123 (165)
T ss_dssp -------S----S-SSHHHHHHHHHHHHTSSC-----CHHHHHHHHHHH
T ss_pred -------C----C-CChhHHHHHHHHHHHcCC-----CHHHHHHHHHHH
Confidence 2 4 499999999999887543 467777777764
No 234
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=34.03 E-value=28 Score=40.32 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=61.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc-----cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV-----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDE 365 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv-----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ 365 (667)
||+.--|+. .++.+++.-...|...+.||-|. .-+.++++..-+-+|..+||++| -..+.+|+ +.|++
T Consensus 402 GGdapGmNa-aIravv~~a~~~g~~v~Gi~~G~~GL~~~~~~~~L~~~~v~~i~~~GGt~L-----GTsR~~~~-~~~~~ 474 (787)
T 3o8o_A 402 GAPSAALNA-ATRAATLYCLSHGHKPYAIMNGFSGLIQTGEVKELSWIDVENWHNLGGSEI-----GTNRSVAS-EDLGT 474 (787)
T ss_dssp SSCCSSHHH-HHHHHHHHHHHHTCEEEEETTHHHHHHHHCCEEECCTTTTTTGGGCCSCTT-----CCBCCCGG-GCHHH
T ss_pred CCCCHHHHH-HHHHHHHHHHHCCCEEEEEccChhhhCCCCCEEECCHHHHhhhhcCCCcee-----ccCCCCch-hhHHH
Confidence 666666654 45666666667899999999876 24567778889999999999975 45666775 68999
Q ss_pred HHHHHhHhcee
Q 005965 366 ILDICNQYDVA 376 (667)
Q Consensus 366 ileI~k~YDVt 376 (667)
+.+.+++|++.
T Consensus 475 ~~~~l~~~~Id 485 (787)
T 3o8o_A 475 IAYYFQKNKLD 485 (787)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHhCCC
Confidence 99999999864
No 235
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.01 E-value=3.4e+02 Score=26.40 Aligned_cols=37 Identities=14% Similarity=0.053 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee
Q 005965 304 DTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA 376 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt 376 (667)
+.+++-++.|+|.+++|.-. +++..++++.+++|++.
T Consensus 113 ~~~~~~~~aGadgii~~d~~------------------------------------~e~~~~~~~~~~~~g~~ 149 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVP------------------------------------VEESAPFRQAALRHNIA 149 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCC------------------------------------GGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEEcCCC------------------------------------HHHHHHHHHHHHHcCCc
Confidence 44556677899999998311 16778888999999864
No 236
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=33.73 E-value=3.9e+02 Score=26.97 Aligned_cols=134 Identities=11% Similarity=0.128 Sum_probs=76.1
Q ss_pred CChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHH--HhcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWI--LRNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
.+.++-+++++.+++.|-.++ .|-.|.+..+-.+.+ +|.. +| .+||. ..++ ...|.++..+.+.+-.
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~-K~K~g~~~~~d~~~v~avR~a---~g~~~~l~---vDan---~~~~~~~a~~~~~~L~ 207 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTL-KIKVGTGIEADIARVKAIREA---VGFDIKLR---LDAN---QAWTPKDAVKAIQALA 207 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEE-EEECCSCHHHHHHHHHHHHHH---HCTTSEEE---EECT---TCSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCeE-EEEeCCCHHHHHHHHHHHHHH---cCCCCeEE---EECC---CCCCHHHHHHHHHHHH
Confidence 367777888888889997765 566676532211111 0100 00 11110 0112 2346666666666555
Q ss_pred hcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCCCcc
Q 005965 311 EQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPGSIY 389 (667)
Q Consensus 311 eqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~ia 389 (667)
+.||+|+- -|+ ..+++.+-++.++.++-+.+|..+.
T Consensus 208 ~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~----- 244 (354)
T 3jva_A 208 DYQIELVE--------------------------------------QPVKRRDLEGLKYVTSQVNTTIMADESCF----- 244 (354)
T ss_dssp TSCEEEEE--------------------------------------CCSCTTCHHHHHHHHHHCSSEEEESTTCC-----
T ss_pred hcCCCEEE--------------------------------------CCCChhhHHHHHHHHHhCCCCEEEcCCcC-----
Confidence 56777763 233 2357778888888888888876542
Q ss_pred CCCc----------------HHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 390 DAND----------------TAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 390 DA~D----------------~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
+..| ..++.-+...-++++.|.++|+++|+-
T Consensus 245 ~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 291 (354)
T 3jva_A 245 DAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIG 291 (354)
T ss_dssp SHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEec
Confidence 2222 222222333457788899999999973
No 237
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=33.47 E-value=42 Score=32.73 Aligned_cols=121 Identities=16% Similarity=0.042 Sum_probs=73.3
Q ss_pred CChHHHHHHHHHHHHhCCcEe---eecCCCCChHHHHHHHHhcCCCCcccchhhhHHH--HhcCCCCCCCHHHHHHHHHH
Q 005965 234 SSIEEEVYKVQWATMWGADTV---MDLSTGRHIHETREWILRNSAVPVGTVPIYQALE--KVDGIAENLSWEVFRDTLIE 308 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtV---MDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~--k~~g~~~~lt~e~~~d~iee 308 (667)
.+.++-++++..+.. |+|.| +|+....+...+.+.+-...+ .+||-=.+. .-||. -..+.+.+++.++.
T Consensus 13 ~t~~e~~~~~~~~~~-~~D~vElRvD~l~~~~~~~v~~~l~~~~~----~~PiI~T~R~~~eGG~-~~~~~~~~~~ll~~ 86 (231)
T 2ocz_A 13 RHFDEAQAIDISKYE-DVNLIEWRADFLPKDEIVAVAPAIFEKFA----GKEIIFTLRTVQEGGN-ITLSSQEYVDIIKE 86 (231)
T ss_dssp SSHHHHHTCCGGGGT-TCSEEEEEGGGSCGGGHHHHHHHHHHHTT----TSEEEEECCBGGGTCS-BCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcc-CCCEEEEEeccccccCHHHHHHHHHHHcC----CCcEEEEEeecccCCC-CCCCHHHHHHHHHH
Confidence 355555666665444 88986 787765556666655432121 145543332 12555 45899999999999
Q ss_pred HHhcC-CCEEEEeccccccccccccCcccC-ccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 309 QAEQG-VDYFTIHAGVLLRYIPLTAKRMTG-IVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 309 QAeqG-VDfmTIHaGv~~~~l~~~~~Rvtg-IVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
-++.| |||+.|-.-...+.+....++ +. |+|. |+-.+-| +...++++=+.++
T Consensus 87 ~~~~g~~d~iDvEl~~~~~~i~~~~~~-~kvI~S~----------Hdf~~tp--~el~~~~~~~~~~ 140 (231)
T 2ocz_A 87 INAIYNPDYIDFEYFTHKSVFQEMLDF-PNLILSY----------HNFEETP--ENLMEAFSEMTKL 140 (231)
T ss_dssp HHHHHCCSEEEEETTTTGGGGGGGTTC-SSEEEEE----------EESSCCC--TTHHHHHHHHHHT
T ss_pred HHHcCCCCEEEEECCCCHHHHHHhhcC-CeEEEEe----------cCCCCCH--HHHHHHHHHHHHc
Confidence 99999 999999876655555544444 43 3331 2234556 5555555555554
No 238
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=33.43 E-value=4.1e+02 Score=27.19 Aligned_cols=77 Identities=8% Similarity=-0.017 Sum_probs=45.6
Q ss_pred Cchh-hhHHHHHHHHhHhceeEeccCCCCCCCccC--------C-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 357 NFAY-EHWDEILDICNQYDVALSIGDGLRPGSIYD--------A-----NDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 357 NpLY-e~FD~ileI~k~YDVtlSLGDGLRPG~iaD--------A-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
=|+- .+++.+-++.++.++-|.+|..+.- ..| + -|..++.-|...-++++.|.++|++||+
T Consensus 227 qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~--~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~--- 301 (382)
T 3dgb_A 227 QPISRNNRAGMVRLNASSPAPIMADESIEC--VEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYG--- 301 (382)
T ss_dssp CCBCTTCHHHHHHHHHHCSSCEEESTTCSS--HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEE---
T ss_pred CCCCccCHHHHHHHHHhCCCCEEeCCCcCC--HHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEee---
Confidence 4553 4688888888888888888876542 111 1 1222222333444667789999999996
Q ss_pred CCCCCCchHHHHHHHH
Q 005965 423 GHIPMHKIPENMQKQL 438 (667)
Q Consensus 423 GHVPl~~I~~Nv~lqk 438 (667)
||+.-.-|-...-+|.
T Consensus 302 ~~~~es~ig~aa~~hl 317 (382)
T 3dgb_A 302 GTMLEGGIGTLASAHA 317 (382)
T ss_dssp CCSCCCHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHHH
Confidence 4433233444444444
No 239
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=33.27 E-value=1.4e+02 Score=30.66 Aligned_cols=111 Identities=8% Similarity=0.030 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEec------cccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHH
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHA------GVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDI 369 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHa------Gv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI 369 (667)
.++.++|.+..++-.++|.+.+-||. |.. ... .++.- ..||++- +|.+=... ++++-
T Consensus 148 ~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~--~~~----~~~~~-~~GG~~~---------~~~~~~~~-e~v~a 210 (410)
T 2gl5_A 148 LVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDD--CVF----QNRNR-NYSGLLL---------ADQLKMGE-ARIAA 210 (410)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB--TTT----SSCCG-GGGSCCC---------HHHHHHHH-HHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccc--ccc----ccccc-cccCccc---------hhHHHHHH-HHHHH
Confidence 35889999999999999999999996 432 110 11111 4666531 11111111 23333
Q ss_pred HhH---hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 370 CNQ---YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 370 ~k~---YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
+|+ .|+.|.+ |+|..-...|.+.+ .++..++|+. +||-| +|-+.++.--++.++
T Consensus 211 vR~a~G~d~~l~v----------Dan~~~~~~~ai~~---~~~l~~~~i~-~iE~P--~~~~~~~~~~~l~~~ 267 (410)
T 2gl5_A 211 MREAMGDDADIIV----------EIHSLLGTNSAIQF---AKAIEKYRIF-LYEEP--IHPLNSDNMQKVSRS 267 (410)
T ss_dssp HHHHHCSSSEEEE----------ECTTCSCHHHHHHH---HHHHGGGCEE-EEECS--SCSSCHHHHHHHHHH
T ss_pred HHHhcCCCCEEEE----------ECCCCCCHHHHHHH---HHHHHhcCCC-eEECC--CChhhHHHHHHHHhh
Confidence 333 4666665 45543334554443 3445567875 78988 566677766555554
No 240
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=33.14 E-value=36 Score=32.87 Aligned_cols=90 Identities=10% Similarity=-0.010 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
..++..+....++|-..+-+-+.+.-++ . .+||||-|--+.++.. + ..+++.+..+.+||.+
T Consensus 35 t~Ll~~i~n~~~~~~kvl~~kp~~D~R~-----~--~~i~S~~g~~~~A~~~-----~----~~~d~~~~~~~~DvIl-- 96 (195)
T 1w4r_A 35 TELMRRVRRFQIAQYKCLVIKYAKDTRY-----S--SSFCTHDRNTMEALPA-----C----LLRDVAQEALGVAVIG-- 96 (195)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCCG-----G--GSCCHHHHHHSEEEEE-----S----SGGGGHHHHHTCSEEE--
T ss_pred HHHHHHHHHHHHcCCeEEEEccccCccc-----h--hhhhhccCCcccceec-----C----CHHHHHHhccCCCEEE--
Confidence 5788888888888866665555433222 1 3599998754332211 1 1222333356688876
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 380 GDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
-|++||- ..+-|+....-+.|+|||+=|
T Consensus 97 ------------IDEaQFf--k~~ve~~~~L~~~gk~VI~~G 124 (195)
T 1w4r_A 97 ------------IDEGQFF--PDIVEFCEAMANAGKTVIVAA 124 (195)
T ss_dssp ------------ESSGGGC--TTHHHHHHHHHHTTCEEEEEE
T ss_pred ------------EEchhhh--HHHHHHHHHHHHCCCeEEEEe
Confidence 4899997 446666666669999999987
No 241
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=33.13 E-value=1.4e+02 Score=26.24 Aligned_cols=114 Identities=17% Similarity=0.187 Sum_probs=63.4
Q ss_pred HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.+.|..+|.||.....-. ....+-.=.+|+.. ....++. .+.+++.|++..++|- =+-|||.-
T Consensus 34 ~~~gI~~Vi~l~~~~~~~-------~~~~~~~~~ip~~D------~~~~~~~~~~~~~~~~i~~~~~~~~-~VlVHC~a- 98 (164)
T 2hcm_A 34 VRAGITLCVNVSRQQPGP-------RAPGVAELRVPVFD------DPAEDLLTHLEPTCAAMEAAVRDGG-SCLVYCKN- 98 (164)
T ss_dssp HHTTEEEEEECSSSCCCC-------CCTTCEEEECCCCS------CTTSCCHHHHHHHHHHHHHHHHTTC-EEEEEESS-
T ss_pred HHCCCeEEEEcCCCCCCC-------CCCCCEEEEEeCcC------CCCchHHHHHHHHHHHHHHHHHcCC-EEEEECCC-
Confidence 468999999998764210 00111111223221 1112221 2445566666555553 35699942
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHH
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQG 404 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LG 404 (667)
| +||-|++.++|++....- .+++.++.+++. ||...-. ..|+..|...-
T Consensus 99 ------------G-~~RSg~~~~ayLm~~~~~-----~~~~A~~~v~~~----------R~~~~pn---~~f~~qL~~~e 147 (164)
T 2hcm_A 99 ------------G-RSRSAAVCTAYLMRHRGH-----SLDRAFQMVKSA----------RPVAEPN---LGFWAQLQKYE 147 (164)
T ss_dssp ------------S-SHHHHHHHHHHHHHHSCC-----CHHHHHHHHHHH----------CTTCCCC---HHHHHHHHHHH
T ss_pred ------------C-CchHHHHHHHHHHHHhCC-----CHHHHHHHHHHH----------CCCcCCC---HHHHHHHHHHH
Confidence 4 499999999998876532 467777777764 6764432 34555555544
Q ss_pred HH
Q 005965 405 EL 406 (667)
Q Consensus 405 EL 406 (667)
+.
T Consensus 148 ~~ 149 (164)
T 2hcm_A 148 QT 149 (164)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 242
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=32.92 E-value=4.5e+02 Score=27.47 Aligned_cols=66 Identities=18% Similarity=0.237 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce-
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV- 375 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV- 375 (667)
++++++.+.++.-.+.|+.+..||+=+--..... .. |.. ..+.|.+++++++++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~Gl~~H~gs~~~d~------------~~----~~~-------~~~~~~~~~~~~~~~G~~ 228 (448)
T 3btn_A 172 TTLKNCRHLLECAKELDVQIIGVKFHVSSACKEY------------QV----YVH-------ALSDARCVFDMAGEFGFT 228 (448)
T ss_dssp BCHHHHHHHHHHHHHHTCEEEEEECCCCTTCCCT------------TH----HHH-------HHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEEECCCCCCCH------------HH----HHH-------HHHHHHHHHHHHHHcCCC
Confidence 4567777666654445999988888543221100 01 111 14456788888888875
Q ss_pred --eEeccCCCCCC
Q 005965 376 --ALSIGDGLRPG 386 (667)
Q Consensus 376 --tlSLGDGLRPG 386 (667)
.|++|-|+ ||
T Consensus 229 ~~~ldiGGG~-~~ 240 (448)
T 3btn_A 229 MNMLDIGGGF-TG 240 (448)
T ss_dssp CCEEECCSCC-CS
T ss_pred CCEEEeCCCc-CC
Confidence 37899888 44
No 243
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=32.85 E-value=2.2e+02 Score=30.08 Aligned_cols=160 Identities=11% Similarity=0.181 Sum_probs=92.0
Q ss_pred ChHHHHHHHHHHH-HhCCcEeeecCCCCChHHHH--H--HHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHH
Q 005965 235 SIEEEVYKVQWAT-MWGADTVMDLSTGRHIHETR--E--WILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQ 309 (667)
Q Consensus 235 ~ieeEveKl~~A~-~~GADtVMDLSTGgdi~~~R--~--~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQ 309 (667)
+.-+-++|+..|+ +.|+-.++-|.-+|-..... . ..+.-|++|... | ....+..||.+++-++|+.-
T Consensus 101 ~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~-~-------~~~~pr~mt~~eI~~ii~~F 172 (419)
T 3l5a_A 101 ACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHS-P-------IEHVVIAMSHEKINSIIQQY 172 (419)
T ss_dssp GGHHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECS-S-------SSEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCcccc-C-------CCCCCccCCHHHHHHHHHHH
Confidence 3456788888777 56999999999887321110 0 011223332211 0 01246789999998888764
Q ss_pred H-------hcCCCEEEEeccc---cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh---ce-
Q 005965 310 A-------EQGVDYFTIHAGV---LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY---DV- 375 (667)
Q Consensus 310 A-------eqGVDfmTIHaGv---~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y---DV- 375 (667)
+ +.|.|.+-||+|= .-+.+.-..++-+. ..|||+|..-| .|+.|-.+.+-+-+.++ |+
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD--~yGGs~lenR~------Rf~~evv~aVr~~v~~~~~~~f~ 244 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTD--HYGADSLKNRA------RLCLEVMRAVQEVIDKEAPDNFI 244 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCS--TTSTTCHHHHH------HHHHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCccccccc--CCCCchhhhhh------HHHHHHHHHHHHHHhhhcCCCee
Confidence 4 5799999999973 22333322343343 47999965433 47788888888877544 33
Q ss_pred ---eEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHh-cCCeEEe
Q 005965 376 ---ALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWD-KDVQVMN 419 (667)
Q Consensus 376 ---tlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e-~gVQVMI 419 (667)
-||..|... |.+ ..+ +.| .-+|+++..+ +||....
T Consensus 245 v~vRis~~~~~~-~~~--G~~---~ed---~~~la~~L~~~~Gvd~I~ 283 (419)
T 3l5a_A 245 LGFRATPEETRG-SDL--GYT---IDE---FNQLIDWVMDVSNIQYLA 283 (419)
T ss_dssp EEEEECSCEEET-TEE--EEC---HHH---HHHHHHHHHHHSCCCCEE
T ss_pred EEEecccccccC-CCC--CCC---HHH---HHHHHHHHHhhcCCcEEE
Confidence 344433222 100 112 222 3456777777 8888654
No 244
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=32.80 E-value=1.6e+02 Score=30.05 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
-+.|.|.+..++-.++|.+.+-||.|
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g 169 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAG 169 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred CCHHHHHHHHHHHHHhhhhheeeccc
Confidence 36899999999989999999999987
No 245
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=32.49 E-value=81 Score=32.39 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=67.6
Q ss_pred ccc-CccccccHHHHHHHHHcCCcC-chhhhHHHHHHHHh----HhceeEec-cCCCCCCCccCCCcHHHHHHHHHHHHH
Q 005965 334 RMT-GIVSRGGSIHAKWCLAYHKEN-FAYEHWDEILDICN----QYDVALSI-GDGLRPGSIYDANDTAQFAELLTQGEL 406 (667)
Q Consensus 334 Rvt-gIVSRGGSi~a~Wml~h~~EN-pLYe~FD~ileI~k----~YDVtlSL-GDGLRPG~iaDA~D~AQ~~EL~~LGEL 406 (667)
+++ ||++|--.-..++....+-+. ..|+.|+++|+--+ +.|+++-. -+.+. .++
T Consensus 66 ~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H-------------------~~~ 126 (417)
T 3v5n_A 66 ELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVH-------------------YAA 126 (417)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSH-------------------HHH
T ss_pred EEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEECCCcHHH-------------------HHH
Confidence 455 577887776666766665443 58999999988532 47876642 22111 468
Q ss_pred HHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccc
Q 005965 407 TRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 407 ~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYv 448 (667)
++.|-++|.-|++|-|--.-+.+.++=+++.++ .+.+|++
T Consensus 127 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~--~g~~~~v 166 (417)
T 3v5n_A 127 AKEFLKRGIHVICDKPLTSTLADAKKLKKAADE--SDALFVL 166 (417)
T ss_dssp HHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHH--CSSCEEE
T ss_pred HHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHH--cCCEEEE
Confidence 889999999999999988888888888888777 5666654
No 246
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=32.46 E-value=1.5e+02 Score=28.35 Aligned_cols=79 Identities=5% Similarity=-0.153 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHhHhceeE---eccCCCCCCC----ccC---CCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCCCCCC
Q 005965 360 YEHWDEILDICNQYDVAL---SIGDGLRPGS----IYD---ANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGHIPMH 428 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtl---SLGDGLRPG~----iaD---A~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGHVPl~ 428 (667)
.+.|.+.+++|++.++.. ..|.. ++. ..+ .....++.. ...|.+|++.|.++||++.||--..-.++
T Consensus 110 ~~~~~~~i~~A~~lGa~~v~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~ 187 (340)
T 2zds_A 110 AAEIKDTARAAARLGVDTVIGFTGSA--IWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAY 187 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCS--SGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTTSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCc--CcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCCcccC
Confidence 578999999999988642 22321 110 011 012333433 34678999999999999999974333456
Q ss_pred chHHHHHHHHHh
Q 005965 429 KIPENMQKQLEW 440 (667)
Q Consensus 429 ~I~~Nv~lqk~l 440 (667)
...+-.++-+++
T Consensus 188 ~~~~~~~ll~~v 199 (340)
T 2zds_A 188 DYWTTHRALEAV 199 (340)
T ss_dssp SHHHHHHHHHHT
T ss_pred CHHHHHHHHHhc
Confidence 666655555554
No 247
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=32.37 E-value=1e+02 Score=32.09 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=59.4
Q ss_pred CCCCHHHHHHHHHHHHh-cCCCEEEEecc---cccc-ccc----ccc--C--cccCccccccHHHHHHHHHcCCcCchhh
Q 005965 295 ENLSWEVFRDTLIEQAE-QGVDYFTIHAG---VLLR-YIP----LTA--K--RMTGIVSRGGSIHAKWCLAYHKENFAYE 361 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAe-qGVDfmTIHaG---v~~~-~l~----~~~--~--RvtgIVSRGGSi~a~Wml~h~~ENpLYe 361 (667)
..|+.+++.+.|..-.+ .||..+.+.-| +..+ .+. ... + +.+.|.|+|=.. ||..-
T Consensus 143 ~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~-----------~p~~i 211 (416)
T 2a5h_A 143 DSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVV-----------LPQRI 211 (416)
T ss_dssp SBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHH-----------CGGGC
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEeccccc-----------ccccC
Confidence 46899999888776666 68988888877 3333 122 111 1 123345554100 12111
Q ss_pred hHHHHHHHHhHhc-eeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 362 HWDEILDICNQYD-VALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 362 ~FD~ileI~k~YD-VtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
=+++++.+++++ |.+|| |+.-|-.|. ...-+-.+++.++|+.|.+...
T Consensus 212 -t~e~l~~L~~~~~v~Isl-~~~~~~ei~-----------~~v~~ai~~L~~aGi~v~i~~v 260 (416)
T 2a5h_A 212 -TPELVNMLKKYHPVWLNT-HFNHPNEIT-----------EESTRACQLLADAGVPLGNQSV 260 (416)
T ss_dssp -CHHHHHHHGGGCSEEEEE-CCCSGGGCC-----------HHHHHHHHHHHHTTCCEEEEEE
T ss_pred -CHHHHHHHHhcCcEEEEE-ecCCHHHHh-----------HHHHHHHHHHHHcCCEEEEEEE
Confidence 178889998885 67777 443332221 2333445667788998877654
No 248
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=32.28 E-value=21 Score=36.80 Aligned_cols=77 Identities=19% Similarity=0.190 Sum_probs=50.5
Q ss_pred HHHHHHHHHhCCcEee---ecCCCCCh--HHHHHHHHhcCCCCcccchhhhHHHHhcCCCC--CCCHHHHHHHHHHHHhc
Q 005965 240 VYKVQWATMWGADTVM---DLSTGRHI--HETREWILRNSAVPVGTVPIYQALEKVDGIAE--NLSWEVFRDTLIEQAEQ 312 (667)
Q Consensus 240 veKl~~A~~~GADtVM---DLSTGgdi--~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~--~lt~e~~~d~ieeQAeq 312 (667)
++-+..|++.|||-|= .|+.||-. -.+-+.+.+.+ ++|+|-.+.-.+|+.. +..-+.|.+-|+.-.+.
T Consensus 49 ~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-----~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~ 123 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLY 123 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-----CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHc
Confidence 5678899999999883 23333311 12333444433 4777776665566543 22346678888889999
Q ss_pred CCCEEEEec
Q 005965 313 GVDYFTIHA 321 (667)
Q Consensus 313 GVDfmTIHa 321 (667)
|+|-+.+||
T Consensus 124 GAdGvVfG~ 132 (287)
T 3iwp_A 124 GADGLVFGA 132 (287)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEee
Confidence 999999997
No 249
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=32.15 E-value=3.7e+02 Score=28.54 Aligned_cols=126 Identities=11% Similarity=0.069 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHHHh-cCCCEEEEecccc--cccccc---ccCccc---------CccccccHHHHHHHHHcCC-----c
Q 005965 297 LSWEVFRDTLIEQAE-QGVDYFTIHAGVL--LRYIPL---TAKRMT---------GIVSRGGSIHAKWCLAYHK-----E 356 (667)
Q Consensus 297 lt~e~~~d~ieeQAe-qGVDfmTIHaGv~--~~~l~~---~~~Rvt---------gIVSRGGSi~a~Wml~h~~-----E 356 (667)
.+.|.+.+..++..+ +|..-|=|..|.. .+-+++ ....+- +--|.--++ +|+..-.. |
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai--~~~~~L~~~l~~iE 267 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSK--WVAKELEGIVEYLE 267 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHH--HHHHHTTTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHH--HHHHHHhhhcCeEe
Confidence 678888888888766 5999999998862 111111 001110 111222222 23333222 5
Q ss_pred CchhhhHHHHHHHHhHhceeEeccCCCCCCCccC--------CCc-----HHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 357 NFAYEHWDEILDICNQYDVALSIGDGLRPGSIYD--------AND-----TAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 357 NpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaD--------A~D-----~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
=|+ ..++.+-++.++.++-|.+|..+. +..| +-| .....-|-..-+++..|.++||+|++-+.+
T Consensus 268 eP~-~d~~~~~~l~~~~~iPIa~dE~~~--~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~ 344 (445)
T 3va8_A 268 DPA-GEIEGMAAVAKEASMPLATNMAVV--AFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLSMHSNS 344 (445)
T ss_dssp SCB-SHHHHHHHHHTTCSSCEEESSSCC--SGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCS
T ss_pred ecC-cCHHHHHHHHHcCCCCEEeCCccC--CHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 565 489999999999999998886443 1111 222 122222333446777889999999998887
Q ss_pred CCCC
Q 005965 424 HIPM 427 (667)
Q Consensus 424 HVPl 427 (667)
+.++
T Consensus 345 e~~I 348 (445)
T 3va8_A 345 HLGI 348 (445)
T ss_dssp CCHH
T ss_pred ccHH
Confidence 7763
No 250
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=31.79 E-value=40 Score=33.63 Aligned_cols=114 Identities=11% Similarity=0.023 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
..++..+.+...+|-..+-+-..+..++ + ..|+||-|--+.+. .....+++++.+.+|||.+
T Consensus 34 T~lL~~~~r~~~~g~kvli~kp~~D~Ry-----g--~~i~sr~G~~~~a~---------~i~~~~di~~~~~~~dvVi-- 95 (234)
T 2orv_A 34 TELMRRVRRFQIAQYKCLVIKYAKDTRY-----S--SSFCTHDRNTMEAL---------PACLLRDVAQEALGVAVIG-- 95 (234)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEETTCCCC------------------CEEE---------EESSGGGGHHHHTTCSEEE--
T ss_pred HHHHHHHHHHHHCCCeEEEEeecCCccc-----h--HHHHhhcCCeeEEE---------ecCCHHHHHHHhccCCEEE--
Confidence 4677788888889977776665443221 1 23666654221110 0112244666667888876
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC----------CCCCCchHHHHHHHHHhcC--CCC
Q 005965 380 GDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPG----------HIPMHKIPENMQKQLEWCN--EAP 445 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG----------HVPl~~I~~Nv~lqk~lC~--~AP 445 (667)
-|++||.. .+-+|++...+.|+.||+=|=- .--|=.+...|...+.+|+ |+|
T Consensus 96 ------------IDEaQF~~--~v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~VtelkaIC~~Cg~~ 159 (234)
T 2orv_A 96 ------------IDEGQFFP--DIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFRE 159 (234)
T ss_dssp ------------ESSGGGCT--THHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEEECCEECTTTCSE
T ss_pred ------------EEchhhhh--hHHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEEeeeeEecCcCCc
Confidence 59999985 3888888888999999997732 2224445566666777777 555
No 251
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=31.69 E-value=3e+02 Score=27.97 Aligned_cols=117 Identities=11% Similarity=0.095 Sum_probs=71.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecccc-----ccccccccCcccC---------ccccccHH-HHHHHHHcCC-----
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVL-----LRYIPLTAKRMTG---------IVSRGGSI-HAKWCLAYHK----- 355 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~-----~~~l~~~~~Rvtg---------IVSRGGSi-~a~Wml~h~~----- 355 (667)
-.+.|.+.+.+++-.++|...+=++.|.. .+.+......+-+ =-+..-++ +++.+.. ..
T Consensus 141 ~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~L~~-~~~~i~~ 219 (365)
T 3ik4_A 141 AGDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAACKA-ESIPMVL 219 (365)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTTCCCHHHHHHHHHHHHH-TTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhh-CCCCceE
Confidence 35789999999998899999999998864 1111100011100 01222222 2333311 22
Q ss_pred -cCchh-hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHH------------------HHHHHHHHHHHHhcCC
Q 005965 356 -ENFAY-EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE------------------LLTQGELTRRAWDKDV 415 (667)
Q Consensus 356 -ENpLY-e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~E------------------L~~LGEL~krA~e~gV 415 (667)
|=|+- .+++.+-++.++.++-|.+|..+. +..++.+ |...-++++.|.++|+
T Consensus 220 iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~--------~~~~~~~~i~~~a~d~v~ik~~~GGit~~~~i~~~A~~~gi 291 (365)
T 3ik4_A 220 FEQPLPREDWAGMAQVTAQSGFAVAADESAR--------SAHDVLRIAREGTASVINIKLMKAGVAEGLKMIAIAQAAGL 291 (365)
T ss_dssp EECCSCTTCHHHHHHHHHHSSSCEEESTTCS--------SHHHHHHHHHHTCCSEEEECHHHHCHHHHHHHHHHHHHHTC
T ss_pred EECCCCcccHHHHHHHHhhCCCCEEECCCCC--------CHHHHHHHHHhCCCCEEEEcCCccCHHHHHHHHHHHHHcCC
Confidence 44553 479999999999999999997743 2333333 3334466788899999
Q ss_pred eEEeeC
Q 005965 416 QVMNEG 421 (667)
Q Consensus 416 QVMIEG 421 (667)
+||+-+
T Consensus 292 ~~~~~~ 297 (365)
T 3ik4_A 292 GLMIGG 297 (365)
T ss_dssp EEEECC
T ss_pred eEEecC
Confidence 999854
No 252
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=31.59 E-value=2.4e+02 Score=26.20 Aligned_cols=78 Identities=12% Similarity=-0.010 Sum_probs=50.5
Q ss_pred hhhHHHHHHHHhHhceeEecc-----CCC--CCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeEEeeCCCC---CCCC
Q 005965 360 YEHWDEILDICNQYDVALSIG-----DGL--RPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQVMNEGPGH---IPMH 428 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLG-----DGL--RPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQVMIEGPGH---VPl~ 428 (667)
.++|.+.+++|++.++..=.+ .|. .++ +...+.+++. ...|.+|.+.|.++||.+.+|--.+ -.++
T Consensus 87 ~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~ 163 (290)
T 2qul_A 87 TEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLD---MKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCN 163 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTT---CCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccCCcccCCC---cccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccC
Confidence 478999999999998653322 232 111 1222333433 3467899999999999999995332 2456
Q ss_pred chHHHHHHHHHh
Q 005965 429 KIPENMQKQLEW 440 (667)
Q Consensus 429 ~I~~Nv~lqk~l 440 (667)
..++-.++-+++
T Consensus 164 ~~~~~~~l~~~~ 175 (290)
T 2qul_A 164 DAKEAIAFADAV 175 (290)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc
Confidence 677777766654
No 253
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=31.37 E-value=2.2e+02 Score=26.35 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=60.7
Q ss_pred HHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee---Ee
Q 005965 302 FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA---LS 378 (667)
Q Consensus 302 ~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt---lS 378 (667)
+.+.++.-++.|.|++-+..+- + + .| .....-.+..+++.+.+++|++. +|
T Consensus 14 ~~~~l~~~~~~G~~~iEl~~~~-----~----~-------------~~----~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 67 (287)
T 2x7v_A 14 FDRVPQDTVNIGGNSFQIFPHN-----A----R-------------SW----SAKLPSDEAATKFKREMKKHGIDWENAF 67 (287)
T ss_dssp GGGHHHHHHHTTCSEEEECSCC-----C----S-------------SS----CCCCCCHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCC-----c----c-------------cc----cccCCCHHHHHHHHHHHHHcCCCcceeE
Confidence 4456667788899998884320 0 0 01 00112236789999999999998 66
Q ss_pred ccCCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 379 IGDGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 379 LGDGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
.-.... ..+.+ .|....+ -+..+-+..+.|.+.|+.+++=.||..+
T Consensus 68 ~h~~~~-~~~~~-~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~ 114 (287)
T 2x7v_A 68 CHSGYL-INLAS-PKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHL 114 (287)
T ss_dssp EECCTT-CCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECT
T ss_pred Eecccc-cccCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 643321 22332 3443333 3456778889999999999987777554
No 254
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=31.22 E-value=78 Score=31.61 Aligned_cols=89 Identities=13% Similarity=0.028 Sum_probs=62.5
Q ss_pred CccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE-eccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCC
Q 005965 337 GIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL-SIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDV 415 (667)
Q Consensus 337 gIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl-SLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gV 415 (667)
.|++|--.-..++-..++-. ..|+.|+++|+= .+-|+++ ...+.+. .++++.|-++|.
T Consensus 50 av~~~~~~~a~~~a~~~~~~-~~~~~~~~ll~~-~~iD~V~i~tp~~~h-------------------~~~~~~al~~Gk 108 (383)
T 3oqb_A 50 ILVGRSAEKVEALAKRFNIA-RWTTDLDAALAD-KNDTMFFDAATTQAR-------------------PGLLTQAINAGK 108 (383)
T ss_dssp EEECSSSHHHHHHHHHTTCC-CEESCHHHHHHC-SSCCEEEECSCSSSS-------------------HHHHHHHHTTTC
T ss_pred EEEcCCHHHHHHHHHHhCCC-cccCCHHHHhcC-CCCCEEEECCCchHH-------------------HHHHHHHHHCCC
Confidence 47777766666666655543 479999999872 3467655 2222222 467899999999
Q ss_pred eEEeeCCCCCCCCchHHHHHHHHHhcCCCCccc
Q 005965 416 QVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 416 QVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYv 448 (667)
-|++|-|--.-+.+.++=+++.++ ++.++++
T Consensus 109 ~V~~EKP~a~~~~~~~~l~~~a~~--~~~~~~v 139 (383)
T 3oqb_A 109 HVYCEKPIATNFEEALEVVKLANS--KGVKHGT 139 (383)
T ss_dssp EEEECSCSCSSHHHHHHHHHHHHH--TTCCEEE
T ss_pred eEEEcCCCCCCHHHHHHHHHHHHH--cCCeEEE
Confidence 999999988888888887777777 4555543
No 255
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=31.08 E-value=2.6e+02 Score=28.89 Aligned_cols=122 Identities=12% Similarity=0.100 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecccc--cccccc---ccCcccC---------ccccccHHHHHHHHHc--CC-----
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVL--LRYIPL---TAKRMTG---------IVSRGGSIHAKWCLAY--HK----- 355 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~--~~~l~~---~~~Rvtg---------IVSRGGSi~a~Wml~h--~~----- 355 (667)
.+.|.+.+.+++-.++|..-+=|+.|.. .+-+++ ...++-+ =-|.--+ .+|+..- ..
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~~~~L~vDaN~~w~~~~A--~~~~~~L~~~~~~i~~ 220 (389)
T 3s5s_A 143 GSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAAPGASLILDGNGGLTAGEA--LALVAHARRLGADVAL 220 (389)
T ss_dssp SCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHCTTCEEEEECTTCSCHHHH--HHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHH--HHHHHHHhhCCCCeEE
Confidence 4778899999998899999999998864 111111 0011100 0122222 1233333 22
Q ss_pred -cCchh-hhHHHHHHHHhHhceeEeccCCCCCCC------ccCCC-----cHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 356 -ENFAY-EHWDEILDICNQYDVALSIGDGLRPGS------IYDAN-----DTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 356 -ENpLY-e~FD~ileI~k~YDVtlSLGDGLRPG~------iaDA~-----D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
|=|+- ++++.+-++.++..+-|.+|..+.-=. -..+- |... .-|...-++++.|.++|++||+-+
T Consensus 221 iEeP~~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~ 298 (389)
T 3s5s_A 221 LEQPVPRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGG 298 (389)
T ss_dssp EECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecC
Confidence 44553 579999999999999999998753100 00111 2233 344445567788999999999844
No 256
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=30.68 E-value=99 Score=30.03 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=49.6
Q ss_pred hhhHHHHHHHHhHhceeEeccC-----CCCCCCccCC---C------cHHHHHHH-HHHHHHHHHHHhcCCeEEeeCCC-
Q 005965 360 YEHWDEILDICNQYDVALSIGD-----GLRPGSIYDA---N------DTAQFAEL-LTQGELTRRAWDKDVQVMNEGPG- 423 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlSLGD-----GLRPG~iaDA---~------D~AQ~~EL-~~LGEL~krA~e~gVQVMIEGPG- 423 (667)
.++|.+.+++|++.++..=+|- |..++...+. . .+.+++.+ ..|.+|++.|.++||.+-+|--+
T Consensus 108 ~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 187 (335)
T 2qw5_A 108 LEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAIEPITH 187 (335)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEECCCCT
T ss_pred HHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCc
Confidence 5789999999999998654542 2222221100 0 23344433 45789999999999999999733
Q ss_pred C--CCCCchHHHHHHHHH
Q 005965 424 H--IPMHKIPENMQKQLE 439 (667)
Q Consensus 424 H--VPl~~I~~Nv~lqk~ 439 (667)
| -.++..++-.++-++
T Consensus 188 ~~~~~~~t~~~~~~ll~~ 205 (335)
T 2qw5_A 188 WETPGPNKLSQLIEFLKG 205 (335)
T ss_dssp TTCSSCCSHHHHHHHHTT
T ss_pred ccccccCCHHHHHHHHHh
Confidence 3 235556655555443
No 257
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=30.65 E-value=1.6e+02 Score=28.11 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=14.6
Q ss_pred HHHHHHHHHhcCCCEEEEec
Q 005965 302 FRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 302 ~~d~ieeQAeqGVDfmTIHa 321 (667)
+.+.|+.-++.|.|.+-+..
T Consensus 38 ~~~~l~~a~~~G~~~vEl~~ 57 (296)
T 2g0w_A 38 FPKRVKVAAENGFDGIGLRA 57 (296)
T ss_dssp HHHHHHHHHHTTCSEEEEEH
T ss_pred HHHHHHHHHHcCCCEEEeCH
Confidence 44556666788999988875
No 258
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=30.63 E-value=1.4e+02 Score=27.34 Aligned_cols=62 Identities=11% Similarity=0.047 Sum_probs=42.0
Q ss_pred HHHHHHHHhHhceeEe-ccCC---CCC---CCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 363 WDEILDICNQYDVALS-IGDG---LRP---GSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 363 FD~ileI~k~YDVtlS-LGDG---LRP---G~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
.+++.+.+++|++.++ +.-. +.. +...|...+. .-+..+-+..+.|.+.|+.+++=.||..|
T Consensus 42 ~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~i~~a~~lG~~~v~~~~g~~~ 110 (260)
T 1k77_A 42 TLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREH--EAHADIDLALEYALALNCEQVHVMAGVVP 110 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHH--HHHHHHHHHHHHHHHTTCSEEECCCCBCC
T ss_pred HHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHH--HHHHHHHHHHHHHHHcCCCEEEECcCCCC
Confidence 6889999999999987 3221 111 1222333322 23445778888999999999998888765
No 259
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=30.60 E-value=4.7e+02 Score=27.04 Aligned_cols=21 Identities=5% Similarity=-0.035 Sum_probs=16.6
Q ss_pred CChHHHHHHHHHHHHhCCcEe
Q 005965 234 SSIEEEVYKVQWATMWGADTV 254 (667)
Q Consensus 234 ~~ieeEveKl~~A~~~GADtV 254 (667)
.++++=.+.++.+++.|-.+|
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~i 162 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAI 162 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcCCCEE
Confidence 467777778888889998877
No 260
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=30.55 E-value=2.6e+02 Score=26.67 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHhHhcee-EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHH
Q 005965 360 YEHWDEILDICNQYDVA-LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQL 438 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVt-lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk 438 (667)
.+.+.+.+++|++.++. +.+|-+ + ..+..++.| .|.+|++.| +||++-+|--.+-.++..++-.++-+
T Consensus 104 ~~~~~~~i~~A~~lGa~~v~~g~~---~----~~~~~~~~~--~l~~l~~~a--~Gv~l~lE~~~~~~~~~~~~~~~l~~ 172 (296)
T 2g0w_A 104 QKKEQTTFHMARLFGVKHINCGLL---E----KIPEEQIIV--ALGELCDRA--EELIIGLEFMPYSGVADLQAAWRVAE 172 (296)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCC---S----CCCHHHHHH--HHHHHHHHH--TTSEEEEECCTTSSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCC---C----CCCHHHHHH--HHHHHHHHh--cCCEEEEEecCCCCCCCHHHHHHHHH
Confidence 46789999999999875 334432 1 113444433 467788888 99999999744445787887777776
Q ss_pred Hhc
Q 005965 439 EWC 441 (667)
Q Consensus 439 ~lC 441 (667)
++-
T Consensus 173 ~v~ 175 (296)
T 2g0w_A 173 ACG 175 (296)
T ss_dssp HHT
T ss_pred HhC
Confidence 653
No 261
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=30.50 E-value=38 Score=34.09 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=21.9
Q ss_pred CchhhhHHHHHHHHhHhceeE----eccCCCCCCC
Q 005965 357 NFAYEHWDEILDICNQYDVAL----SIGDGLRPGS 387 (667)
Q Consensus 357 NpLYe~FD~ileI~k~YDVtl----SLGDGLRPG~ 387 (667)
||+..+ +++++.|++++|.+ +||-|+..|.
T Consensus 202 ~~~~~~-~~l~~~c~~~gI~v~ayspL~~G~L~~~ 235 (334)
T 3krb_A 202 HPWHPN-DATVKFCLDNGIGVTAYSPMGGSYADPR 235 (334)
T ss_dssp BTTBCC-HHHHHHHHHTTCEEEEESTTCCSBC---
T ss_pred Cccccc-HHHHHHHHHcCCEEEEEecCCCCcccCC
Confidence 565554 78999999999998 5888876553
No 262
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=30.46 E-value=4.6e+02 Score=26.86 Aligned_cols=182 Identities=12% Similarity=0.083 Sum_probs=102.7
Q ss_pred HHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHHH
Q 005965 166 YAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 245 (667)
Q Consensus 166 ~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~ 245 (667)
.|+.|+-.--..-.|+..|++.-.+. -|. ..++.+.+.+|-+- ..++++=++.++.
T Consensus 130 ~A~~aid~AlwDl~ak~~g~Pl~~lL----Gg~-------------------~~~vp~y~~~g~~~-~~~~e~~~~~a~~ 185 (398)
T 2pp0_A 130 QAISPIDIALWDMKAKRAGLPLAKLL----GAH-------------------RDSVQCYNTSGGFL-HTPLDQVLKNVVI 185 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTTSBHHHHH----CCS-------------------CSEEEEEECTTSCT-TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHh----CCC-------------------CCCeeEEEecCCcC-CCCHHHHHHHHHH
Confidence 45555544444556677776654433 221 12344455443221 1367777888899
Q ss_pred HHHhCCcEeeecCCCC-ChHHHHHHH--HhcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 246 ATMWGADTVMDLSTGR-HIHETREWI--LRNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 246 A~~~GADtVMDLSTGg-di~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
+.+.|-++|= +-.|. ++..-.+.| +|.. +| .+|| ...++ ...|.++..+.+++-.+.||+|+-
T Consensus 186 ~~~~Gf~~vK-ik~g~~~~~~d~e~v~avR~a---vG~d~~l---~vDan---~~~~~~~ai~~~~~l~~~~i~~iE--- 252 (398)
T 2pp0_A 186 SRENGIGGIK-LKVGQPNCAEDIRRLTAVREA---LGDEFPL---MVDAN---QQWDRETAIRMGRKMEQFNLIWIE--- 252 (398)
T ss_dssp HHHTTCSCEE-EECCCSCHHHHHHHHHHHHHH---HCSSSCE---EEECT---TCSCHHHHHHHHHHHGGGTCSCEE---
T ss_pred HHHhCCCeEE-EecCCCCHHHHHHHHHHHHHH---cCCCCeE---EEECC---CCCCHHHHHHHHHHHHHcCCceee---
Confidence 9999988874 54553 432222111 0110 01 1222 00222 245778888888776677888752
Q ss_pred cccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHhceeEeccCCCCCC---------CccC-
Q 005965 322 GVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQYDVALSIGDGLRPG---------SIYD- 390 (667)
Q Consensus 322 Gv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG---------~iaD- 390 (667)
-|+ ..+++.+-++.++.++-+.+|+.+.-- ..+|
T Consensus 253 -----------------------------------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 297 (398)
T 2pp0_A 253 -----------------------------------EPLDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDF 297 (398)
T ss_dssp -----------------------------------CCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred -----------------------------------CCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 121 135777888888888888888876510 0011
Q ss_pred -CCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 391 -ANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 391 -A~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
.-|..++.-|-..-++++.|.++|++||+
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~ 327 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAP 327 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEee
Confidence 12444444455556788899999999994
No 263
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=30.38 E-value=34 Score=40.55 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=59.0
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccc-----cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHH
Q 005965 291 DGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGV-----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDE 365 (667)
Q Consensus 291 ~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv-----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ 365 (667)
||+.--|+. .++.+++.-...|...+.||-|. .-+.++++..-+-+|..+||++| -..+-+| ++.+++
T Consensus 607 GGdaPGmNA-aIravV~~a~~~g~~V~Gi~~G~~GLl~~~~~~~L~~~~V~~i~~~GGTiL-----GTsR~~~-~~~~~~ 679 (989)
T 3opy_A 607 GAPTSALNP-ATRVATLNSLAKGHRVFAIRNGFAGLIRHGAVRELNWIDVEDWHNTGGSEI-----GTNRSLP-SDDMGT 679 (989)
T ss_dssp SSCCTTHHH-HHHHHHHHHHHTTCEEEEETTHHHHHHHHCCEEEECTTTTTTTTTCCSCSS-----CCBCCCG-GGGHHH
T ss_pred CCCCHHHHH-HHHHHHHHHHHCCCEEEEEccChhhhcCCCcEEECCHHHhhCHhhCCCcEe-----ccCCCCc-hhhHHH
Confidence 344444442 45666766667899999999886 23566777788999999999976 4455666 478999
Q ss_pred HHHHHhHhcee
Q 005965 366 ILDICNQYDVA 376 (667)
Q Consensus 366 ileI~k~YDVt 376 (667)
+.+.+++|++.
T Consensus 680 i~~~l~~~~Id 690 (989)
T 3opy_A 680 VAYYFQQYKFD 690 (989)
T ss_dssp HHHHHHHHTCS
T ss_pred HHHHHHHcCCC
Confidence 99999999864
No 264
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=30.29 E-value=72 Score=31.37 Aligned_cols=84 Identities=11% Similarity=0.041 Sum_probs=50.9
Q ss_pred hHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHH----------------HHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 362 HWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAEL----------------LTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL----------------~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
.+++|-.|++.+++-+-.+|+++.- .|+.|+ ..+-+|.+.|++.|+.++||=-+
T Consensus 94 ~~~~l~~i~~~v~lPvl~kdfI~d~--------~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~-- 163 (254)
T 1vc4_A 94 SLLDLKRVREAVDLPLLRKDFVVDP--------FMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHT-- 163 (254)
T ss_dssp CHHHHHHHHHHCCSCEEEESCCCSH--------HHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECS--
T ss_pred CHHHHHHHHHhcCCCEEECCcCCCH--------HHHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECC--
Confidence 6778888888999988888877543 333332 35667788888889998866432
Q ss_pred CCCchHHHHHHHHHhcCCCCccccCcc-ccccCCCchh
Q 005965 426 PMHKIPENMQKQLEWCNEAPFYTLGPL-TTDIAPGYDH 462 (667)
Q Consensus 426 Pl~~I~~Nv~lqk~lC~~APfYvLGPL-vTDIApGYDH 462 (667)
.++ ++ .-+--++.+.-++|. .||+.++.+.
T Consensus 164 ----~~E-~~--~a~~~gad~IGvn~~~l~~~~~dl~~ 194 (254)
T 1vc4_A 164 ----ERE-LE--IALEAGAEVLGINNRDLATLHINLET 194 (254)
T ss_dssp ----HHH-HH--HHHHHTCSEEEEESBCTTTCCBCTTH
T ss_pred ----HHH-HH--HHHHcCCCEEEEccccCcCCCCCHHH
Confidence 232 22 222224555555552 2445555554
No 265
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=30.21 E-value=4.7e+02 Score=26.87 Aligned_cols=146 Identities=10% Similarity=0.129 Sum_probs=79.4
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHh-CCcEeeecCCCC-ChHHHHHHH--HhcCCCCcc-cchhhhHHHHhcCCC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMW-GADTVMDLSTGR-HIHETREWI--LRNSAVPVG-TVPIYQALEKVDGIA 294 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~-GADtVMDLSTGg-di~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g~~ 294 (667)
++.+.+++|- .+.++-+++++.+++. |-.++ -|-.|. ++.+-.+.| +|.. +| .++| ...++
T Consensus 156 ~v~~y~s~g~----~~~e~~~~~a~~~~~~~G~~~~-KlKvG~~~~~~d~~~v~avR~a---~G~~~~l---~vDaN--- 221 (383)
T 3toy_A 156 PIPAYDSYGV----LDARDDERTLRTACDEHGFRAI-KSKGGHGDLATDEAMIKGLRAL---LGPDIAL---MLDFN--- 221 (383)
T ss_dssp CEEEEEECSS----CCHHHHHHHHHHHHHTSCCCEE-EEECCSSCHHHHHHHHHHHHHH---HCTTSEE---EEECT---
T ss_pred ceEEeEecCC----CCHHHHHHHHHHHHHccCCcEE-EEecCCCCHHHHHHHHHHHHHH---hCCCCeE---EEeCC---
Confidence 3455666554 5778888888888888 97665 455554 333322211 1110 00 0111 00112
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHHhHh
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDICNQY 373 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~k~Y 373 (667)
...|.++-++.+.+-.+.||+|+- -|+ ..+++.+-++.++.
T Consensus 222 ~~~~~~~A~~~~~~l~~~~i~~iE--------------------------------------eP~~~~d~~~~~~l~~~~ 263 (383)
T 3toy_A 222 QSLDPAEATRRIARLADYDLTWIE--------------------------------------EPVPQENLSGHAAVRERS 263 (383)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE--------------------------------------CCSCTTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEE--------------------------------------CCCCcchHHHHHHHHhhc
Confidence 235667777777666677888872 232 23566677777777
Q ss_pred ceeEeccCCCCCCCcc--------CC-----CcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 374 DVALSIGDGLRPGSIY--------DA-----NDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 374 DVtlSLGDGLRPG~ia--------DA-----~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
++-+.+|..+.- .. .+ -|.....-|...-++++.|.++|++||+
T Consensus 264 ~iPIa~dE~~~~--~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~ 320 (383)
T 3toy_A 264 EIPIQAGENWWF--PRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSS 320 (383)
T ss_dssp SSCEEECTTCCH--HHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCC
T ss_pred CCCEEeCCCcCC--HHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 777777765431 00 00 1112222233344677788899999986
No 266
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=30.18 E-value=3.1e+02 Score=25.32 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee---E
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA---L 377 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt---l 377 (667)
.+.+.|+.-++.|.|++-+... . .+. | .....-.+..+++.+.+++|++. +
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~-~--------~~~-------------~----~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTK-N--------QRQ-------------W----RAAPLTTQTIDEFKAACEKYHYTSAQI 66 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSS-C--------SSC-------------S----SCCCCCHHHHHHHHHHHHHTTCCGGGB
T ss_pred CHHHHHHHHHHcCCCEEEeeCC-C--------CCc-------------C----cCCCCCHHHHHHHHHHHHHcCCCceeE
Confidence 4667777788899999877321 0 000 0 00012246789999999999998 5
Q ss_pred eccCCCCCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 378 SIGDGLRPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 378 SLGDGLRPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
|..-... ..+.. .|....+ -+..+-+..+.|.+.|+.+++=.||..+
T Consensus 67 ~~~~~~~-~~l~~-~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~ 114 (285)
T 1qtw_A 67 LPHDSYL-INLGH-PVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 (285)
T ss_dssp CCBCCTT-CCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCT
T ss_pred EecCCcc-cccCC-CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCC
Confidence 5433221 22322 3444333 3456778889999999999988887654
No 267
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=30.10 E-value=2e+02 Score=29.36 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=48.3
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCC---CCChHHHHHHHHhcCCC----Ccccchh------hhHHHHhcCCCCCCCHHH
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLST---GRHIHETREWILRNSAV----PVGTVPI------YQALEKVDGIAENLSWEV 301 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLST---Ggdi~~~R~~Il~nspv----PVGTVPI------YqAl~k~~g~~~~lt~e~ 301 (667)
+++.=++++..|.++|..||+|.+| +.|+..+++.-- ..++ ..|.=|. |-.... . ...+.++
T Consensus 61 ~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~-~~g~~i~~~tG~hp~~~~~~~~~~~~~---~-~~~~~~~ 135 (339)
T 3gtx_A 61 ALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSE-ATGLQILCATGFYYEGGGATTYFKFRA---S-LGDAESE 135 (339)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHH-HHCCEEECEECCCCTTTSSCHHHHHHH---H-HSCHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHH-HcCCcEEEEcCCCccCccCCcCCcccc---c-ccCCHHH
Confidence 3444578889999999999999997 678888876554 3333 4565553 211110 0 0224467
Q ss_pred HHHHHHHHHhcCCC
Q 005965 302 FRDTLIEQAEQGVD 315 (667)
Q Consensus 302 ~~d~ieeQAeqGVD 315 (667)
|.+.+.+....|++
T Consensus 136 L~~~~~~e~~~gIg 149 (339)
T 3gtx_A 136 IYEMMRTEVTEGIA 149 (339)
T ss_dssp HHHHHHHHHHTCST
T ss_pred HHHHHHHHHHhccc
Confidence 77777777777765
No 268
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=30.07 E-value=4.3e+02 Score=27.93 Aligned_cols=126 Identities=9% Similarity=0.034 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHHHh-cCCCEEEEecccc--cccccc---ccCcc-----c----CccccccHHHHHHHHHcCC-----c
Q 005965 297 LSWEVFRDTLIEQAE-QGVDYFTIHAGVL--LRYIPL---TAKRM-----T----GIVSRGGSIHAKWCLAYHK-----E 356 (667)
Q Consensus 297 lt~e~~~d~ieeQAe-qGVDfmTIHaGv~--~~~l~~---~~~Rv-----t----gIVSRGGSi~a~Wml~h~~-----E 356 (667)
.+.|.+.+..++..+ +|..-|=|..|.. .+-+++ ....+ + +--|.--+ .+|+..-.. |
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~A--i~~~~~L~~~l~~iE 264 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETS--IRVGRALDGVLEYLE 264 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHH--HHHHHHTTTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHH--HHHHHHHHHHHHHhh
Confidence 678899888888766 5999999998862 111111 00111 0 11122222 233333332 5
Q ss_pred CchhhhHHHHHHHHhHhceeEeccCCCCCCCccC--------CCcHHH-----HHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 357 NFAYEHWDEILDICNQYDVALSIGDGLRPGSIYD--------ANDTAQ-----FAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 357 NpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaD--------A~D~AQ-----~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
=|+ ..++.+-++.++..+-|.+|..+. +..| +-|-.| ..-|-..-+++..|.++||+||+-+.+
T Consensus 265 eP~-~~~~~~~~l~~~~~iPIa~dE~~~--~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~ 341 (441)
T 3vc5_A 265 DPT-PGIDGMARVAAEVPMPLATNMCVV--TPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIELSMHSNS 341 (441)
T ss_dssp CCS-SSHHHHHHHHTTSSSCEEESSSCC--SGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred ccC-CCHHHHHHHHhcCCCCEEeCCCCC--CHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 565 489999999999999999887542 1111 112111 112333346778899999999997777
Q ss_pred CCCC
Q 005965 424 HIPM 427 (667)
Q Consensus 424 HVPl 427 (667)
+.++
T Consensus 342 e~~i 345 (441)
T 3vc5_A 342 HLGI 345 (441)
T ss_dssp CCHH
T ss_pred ccHH
Confidence 7663
No 269
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=29.69 E-value=4.9e+02 Score=26.98 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV 375 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV 375 (667)
-++++++.+.++.-.+.|+.+..||+=+--.... ...|... .+.+.++++.++++++
T Consensus 171 G~~~~~~~~~~~~~~~~~l~l~Glh~H~gsq~~d----------------~~~~~~a-------~~~~~~~~~~~~~~G~ 227 (424)
T 7odc_A 171 GATLKTSRLLLERAKELNIDVIGVSFHVGSGCTD----------------PDTFVQA-------VSDARCVFDMATEVGF 227 (424)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEEECCCCSSCCC----------------THHHHHH-------HHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEEEECCCCCCC----------------HHHHHHH-------HHHHHHHHHHHHhcCC
Confidence 3567788777776556799999998754322111 0112211 4556777888888876
Q ss_pred ---eEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHH--hcCCeEEee
Q 005965 376 ---ALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAW--DKDVQVMNE 420 (667)
Q Consensus 376 ---tlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~--e~gVQVMIE 420 (667)
.|+||=|| |+.-.+..|-.++++.+ .+..++.. +.++++++|
T Consensus 228 ~~~~ldiGGG~-~~~~~~~~~~~~~a~~i--~~~~~~~~~~~~~~~ii~E 274 (424)
T 7odc_A 228 SMHLLDIGGGF-PGSEDTKLKFEEITSVI--NPALDKYFPSDSGVRIIAE 274 (424)
T ss_dssp CCCEEECCCCC-CCSSSSSSCHHHHHHHH--HHHHHHHSCGGGTCEEEEC
T ss_pred CCCEEEeCCCc-CCCCCCCCCHHHHHHHH--HHHHHHHhcccCCcEEEEC
Confidence 47899999 44321223555555432 22222221 347888888
No 270
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=29.52 E-value=3.1e+02 Score=27.48 Aligned_cols=97 Identities=10% Similarity=0.033 Sum_probs=54.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCC--cCchhhhH----HHHHH
Q 005965 295 ENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHK--ENFAYEHW----DEILD 368 (667)
Q Consensus 295 ~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~--ENpLYe~F----D~ile 368 (667)
..++.+.|...++.-.+.|+.+. +|+.=+.+.+..... +.|.-...++...+- ......|. ++.++
T Consensus 222 ~~~~~~~l~~~~~~A~~~g~~v~-~H~~e~~~~~~~~~~-------~~g~~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~ 293 (468)
T 3lnp_A 222 YTVSDEPLKEITMLSDQLDMPVQ-IHLHETDFEVSESLE-------TFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIK 293 (468)
T ss_dssp TTSCHHHHHHHHHHHHHHTCCEE-EEESCSHHHHHHHHH-------HHSSCHHHHHHHTTCCSTTEEEEECCSCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEE-EEeCCCHHHHHHHHH-------HhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHH
Confidence 46788888888888888899865 599654433332110 111111122222111 00111111 45688
Q ss_pred HHhHhceeEec--------cCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 369 ICNQYDVALSI--------GDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 369 I~k~YDVtlSL--------GDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
.+++.++.+++ |.|+-| ++++.++||.|.+-
T Consensus 294 ~l~~~g~~v~~~p~s~~~~~~~~~~---------------------~~~~~~~Gv~v~lg 332 (468)
T 3lnp_A 294 ILQKTGASIIHCPESNLKLASGFCP---------------------IAKLSAANIPLAIG 332 (468)
T ss_dssp HHHHHCCEEEECHHHHHHTTCCCCC---------------------HHHHHHTTCCEEEC
T ss_pred HHHhcCCEEEEChhhhhhcCCCCCC---------------------HHHHHHCCCeEEEE
Confidence 89999999874 333332 45677899998885
No 271
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=29.38 E-value=1.1e+02 Score=30.41 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.|+.|++.+.+++..+.|+.-+.+-.|-
T Consensus 90 ~ls~eei~~~~~~~~~~G~~~i~l~gGe 117 (350)
T 3t7v_A 90 RLTMEEIKETCKTLKGAGFHMVDLTMGE 117 (350)
T ss_dssp BCCHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEeeCC
Confidence 4899999999999888999887774453
No 272
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=29.32 E-value=1.2e+02 Score=30.74 Aligned_cols=154 Identities=21% Similarity=0.254 Sum_probs=82.4
Q ss_pred HHHHHHHHH-HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHH-------
Q 005965 238 EEVYKVQWA-TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQ------- 309 (667)
Q Consensus 238 eEveKl~~A-~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQ------- 309 (667)
+-++|+..+ -+.|+-.++-|.-+|-........+.-|++|... ....+..||.+++-++++.-
T Consensus 83 ~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~---------~~~~p~~mt~~eI~~~i~~~~~aA~~a 153 (338)
T 1z41_A 83 EGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDE---------QSATPVEMSAEKVKETVQEFKQAAARA 153 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSST---------TSCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCC---------CCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 345666544 4568888899976551100000122223333211 12356789988877766554
Q ss_pred HhcCCCEEEEeccc---ccccc-ccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhcee--EeccCCC
Q 005965 310 AEQGVDYFTIHAGV---LLRYI-PLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVA--LSIGDGL 383 (667)
Q Consensus 310 AeqGVDfmTIHaGv---~~~~l-~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVt--lSLGDGL 383 (667)
.+.|.|.+-||+|- .-+.+ |.+..|- . ..|||+.-. -.++.+-.+.|.+-+ .+.|. ||..|.+
T Consensus 154 ~~aGfDgVeih~~~gyLl~qFlsp~~n~R~-d--~yGGslenr-------~r~~~eiv~avr~~v-~~pv~vris~~~~~ 222 (338)
T 1z41_A 154 KEAGFDVIEIHAAHGYLIHEFLSPLSNHRT-D--EYGGSPENR-------YRFLREIIDEVKQVW-DGPLFVRVSASDYT 222 (338)
T ss_dssp HHTTCSEEEEEECTTSHHHHHHCTTTCCCC-S--TTSSSHHHH-------HHHHHHHHHHHHHHC-CSCEEEEEECCCCS
T ss_pred HHcCCCEEEeccccchHHHHccCCCcCCcC-c--ccCcchhhh-------HHHHHHHHHHHHHHc-CCcEEEEecCcccC
Confidence 36899999999862 22222 2333343 2 378986422 234555555555544 34443 4554433
Q ss_pred CCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 384 RPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 384 RPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
- +..+.. ...+|+++..++||..+.-..
T Consensus 223 ~-----~g~~~~------~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 223 D-----KGLDIA------DHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp T-----TSCCHH------HHHHHHHHHHHTTCCEEEEEC
T ss_pred C-----CCCCHH------HHHHHHHHHHHcCCCEEEEec
Confidence 2 223332 245677888889998765433
No 273
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=29.06 E-value=3.5e+02 Score=27.29 Aligned_cols=93 Identities=15% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHH-HHHHHHhH--
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD-EILDICNQ-- 372 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD-~ileI~k~-- 372 (667)
..+.+.|.+..++-.++|.+.+-||.|- | ++ .+| ++++-+|+
T Consensus 144 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~-------------------~-------------~~---~~~~e~v~avr~a~ 188 (371)
T 2ovl_A 144 ELPVADLKTQADRFLAGGFRAIKMKVGR-------------------P-------------DL---KEDVDRVSALREHL 188 (371)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEECCC-------------------S-------------SH---HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC-------------------C-------------CH---HHHHHHHHHHHHHh
Confidence 4588999999999999999999999873 0 11 122 33333333
Q ss_pred -hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 373 -YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 373 -YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
.|+.|.+ |+|..-...|.+. +.++..++|+. +||-| +|-++++.--++.++
T Consensus 189 G~d~~l~v----------Dan~~~~~~~a~~---~~~~l~~~~i~-~iEqP--~~~~d~~~~~~l~~~ 240 (371)
T 2ovl_A 189 GDSFPLMV----------DANMKWTVDGAIR---AARALAPFDLH-WIEEP--TIPDDLVGNARIVRE 240 (371)
T ss_dssp CTTSCEEE----------ECTTCSCHHHHHH---HHHHHGGGCCS-EEECC--SCTTCHHHHHHHHHH
T ss_pred CCCCeEEE----------ECCCCCCHHHHHH---HHHHHHhcCCC-EEECC--CCcccHHHHHHHHhh
Confidence 2555543 4553333344433 34455578887 68988 455666665555554
No 274
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=29.05 E-value=96 Score=33.57 Aligned_cols=61 Identities=10% Similarity=0.095 Sum_probs=42.5
Q ss_pred hhHHHHHHHHhHhcee----EeccCCCCCCC---ccCCCcHHHHHHHHH-HHHHHHHHHhcCCeEEeeCCCCCC
Q 005965 361 EHWDEILDICNQYDVA----LSIGDGLRPGS---IYDANDTAQFAELLT-QGELTRRAWDKDVQVMNEGPGHIP 426 (667)
Q Consensus 361 e~FD~ileI~k~YDVt----lSLGDGLRPG~---iaDA~D~AQ~~EL~~-LGEL~krA~e~gVQVMIEGPGHVP 426 (667)
+-++++-+|+++|++. .-.|||-===. +.|.+|..+++.+.. ..+|.+++.|||| |..+.|
T Consensus 438 ~~~~~~~~~~~~~g~~~~~~gH~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~eHGi-----G~~k~~ 506 (560)
T 1e8g_A 438 MQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDDCAANGW-----GEYRTH 506 (560)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEECSSCEEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHHTTC-----CBSCCC
T ss_pred HHHHHHHHHHHHcCCceEEEEEecCCeEEEEecccCCCCCHHHHHHHHHHHHHHHHHHHHcCC-----cccccc
Confidence 3456667788999865 45678632222 267778877766654 4589999999998 777777
No 275
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.03 E-value=43 Score=28.38 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=36.5
Q ss_pred hHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEE
Q 005965 362 HWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVM 418 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVM 418 (667)
+-++||||+-++ + ..||-----.|++|.-.+.|... ..-..|.+-|||+-
T Consensus 11 nkeelleialkf---i--sqgldlevefdstddkeieefer--dmedlakktgvqiq 60 (83)
T 2ln3_A 11 NKEELLEIALKF---I--SQGLDLEVEFDSTDDKEIEEFER--DMEDLAKKTGVQIQ 60 (83)
T ss_dssp CHHHHHHHHHHH---H--HHTCEEEEEECCCCHHHHHHHHH--HHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHH---H--hcCCceEEEecCCChHHHHHHHh--HHHHHHHhhchhHH
Confidence 347899999887 2 23444445679999999999864 44566788999974
No 276
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=29.01 E-value=1.2e+02 Score=30.22 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=45.8
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHH-HHHHHHHHHHHHhcCCeE--EeeCCCCCC-CCchHHHHHH
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE-LLTQGELTRRAWDKDVQV--MNEGPGHIP-MHKIPENMQK 436 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~E-L~~LGEL~krA~e~gVQV--MIEGPGHVP-l~~I~~Nv~l 436 (667)
+.|+++++++++|++.+-+=---..|--.| ++| +..+-+++++|.++||.- +|==||.-| -...+.|+.+
T Consensus 112 d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t------~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~ 185 (271)
T 2yci_X 112 WKMDIFFPMAKKYEAAIIGLTMNEKGVPKD------ANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEV 185 (271)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCBTTBCCCS------HHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHH
T ss_pred cccHHHHHHHHHcCCCEEEEecCCCCCCCC------HHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHH
Confidence 458999999999998775521000121112 222 345788999999999983 555688888 3456666444
Q ss_pred HH
Q 005965 437 QL 438 (667)
Q Consensus 437 qk 438 (667)
-+
T Consensus 186 l~ 187 (271)
T 2yci_X 186 LE 187 (271)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 277
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=28.68 E-value=4.2e+02 Score=27.58 Aligned_cols=71 Identities=20% Similarity=0.166 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHH--hcCCCCcc-cchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 237 EEEVYKVQWATMWGADTVMDLSTGRHIHETREWIL--RNSAVPVG-TVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 237 eeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il--~nspvPVG-TVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
++=++.++.+.+.|-++|= +-.|.++....+.|- |.. +| .+||. ..++ ...|.++..+.+++-.+.|
T Consensus 187 e~~~~~a~~~~~~Gf~~vK-ik~g~~~~~d~e~v~avR~a---vG~d~~l~---vDan---~~~~~~eai~~~~~L~~~~ 256 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALK-LRIGDAARVDIERVRHVRKV---LGDEVDIL---TDAN---TAYTMADARRVLPVLAEIQ 256 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEE-EECCSCHHHHHHHHHHHHHH---HCTTSEEE---EECT---TCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEE-ECCCCCHHHHHHHHHHHHHh---cCCCCEEE---EECC---CCCCHHHHHHHHHHHHhcC
Confidence 6667788888999998874 555655443322221 111 11 22221 1222 3467888888887777789
Q ss_pred CCEE
Q 005965 314 VDYF 317 (667)
Q Consensus 314 VDfm 317 (667)
|+|+
T Consensus 257 i~~i 260 (428)
T 3bjs_A 257 AGWL 260 (428)
T ss_dssp CSCE
T ss_pred CCEE
Confidence 9876
No 278
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=28.65 E-value=4.6e+02 Score=26.25 Aligned_cols=123 Identities=16% Similarity=0.239 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhCCcEeeecCCCC----ChHHHHHH--HHhcCCCCcccchhhhHHHHhcCCCC-CCCHHHHHHHHHHHHh
Q 005965 239 EVYKVQWATMWGADTVMDLSTGR----HIHETREW--ILRNSAVPVGTVPIYQALEKVDGIAE-NLSWEVFRDTLIEQAE 311 (667)
Q Consensus 239 EveKl~~A~~~GADtVMDLSTGg----di~~~R~~--Il~nspvPVGTVPIYqAl~k~~g~~~-~lt~e~~~d~ieeQAe 311 (667)
|..-++.|.++|+- |-+|+.. +... .+| +++... ..+|+. +.+. ..+.+.+...+++
T Consensus 75 ~~~~a~aa~~~G~~--~~~~~~~~~l~~~~~-~~~~~~~~~~~---~~~pv~-------~~i~~~~~~~~~~~~~~~--- 138 (349)
T 1p0k_A 75 NKSLARAASQAGIP--LAVGSQMSALKDPSE-RLSYEIVRKEN---PNGLIF-------ANLGSEATAAQAKEAVEM--- 138 (349)
T ss_dssp HHHHHHHHHHHTCC--EECCCCTTTTTCHHH-HHHHHHHHHHC---SSSCEE-------EEEETTCCHHHHHHHHHH---
T ss_pred HHHHHHHHHHcCCc--EEeccchhcccCccc-ccceehhhhhC---CCceeE-------EeecCCCCHHHHHHHHHh---
Confidence 45556778999965 5677763 2211 111 222111 022322 1222 4566666654443
Q ss_pred cCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhh-hHHHHHHHHhHhceeEec---cCCCCCCC
Q 005965 312 QGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYE-HWDEILDICNQYDVALSI---GDGLRPGS 387 (667)
Q Consensus 312 qGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe-~FD~ileI~k~YDVtlSL---GDGLRPG~ 387 (667)
.|+|++.||.+...+ .++..| ++.++ -+|.|-+|.+.+++-+.+ |.++
T Consensus 139 ~gad~i~i~~~~~~~-----------~~~~~~-------------~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~---- 190 (349)
T 1p0k_A 139 IGANALQIHLNVIQE-----------IVMPEG-------------DRSFSGALKRIEQICSRVSVPVIVKEVGFGM---- 190 (349)
T ss_dssp TTCSEEEEEECTTTT-----------C---------------------CTTHHHHHHHHHHHCSSCEEEEEESSCC----
T ss_pred cCCCeEEecccchhh-----------hcCCCC-------------CcchHHHHHHHHHHHHHcCCCEEEEecCCCC----
Confidence 589999999874211 223222 34443 345555566667776665 4433
Q ss_pred ccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 388 IYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 388 iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
+ -+.+++|.++||..++=
T Consensus 191 -----~----------~~~a~~a~~~Gad~I~v 208 (349)
T 1p0k_A 191 -----S----------KASAGKLYEAGAAAVDI 208 (349)
T ss_dssp -----C----------HHHHHHHHHHTCSEEEE
T ss_pred -----C----------HHHHHHHHHcCCCEEEE
Confidence 1 14468888999985543
No 279
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=28.65 E-value=81 Score=33.57 Aligned_cols=130 Identities=19% Similarity=0.282 Sum_probs=76.3
Q ss_pred HHHHHHHHHHH-HhCCcEeeecCCCCChHHHHHHHHhc-CCCCcccchhhh------HHHHhcCCCCCCCHHHHHHHHHH
Q 005965 237 EEEVYKVQWAT-MWGADTVMDLSTGRHIHETREWILRN-SAVPVGTVPIYQ------ALEKVDGIAENLSWEVFRDTLIE 308 (667)
Q Consensus 237 eeEveKl~~A~-~~GADtVMDLSTGgdi~~~R~~Il~n-spvPVGTVPIYq------Al~k~~g~~~~lt~e~~~d~iee 308 (667)
-+-++|+..|+ +.|+-.++-|.-.|-... ..++.. -.-|++--++.- ........+..||.+++-++|+.
T Consensus 91 i~~~k~l~~avH~~G~~i~~QL~H~Gr~~~--~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~ 168 (407)
T 3tjl_A 91 AKAWKVITDKVHANGSFVSTQLIFLGRVAD--PAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYE 168 (407)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGSC--HHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCCCccc--hhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHH
Confidence 34567777676 579999999987763211 111211 112233222211 11122346789999999988877
Q ss_pred --------HHhcCCCEEEEeccc---cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 309 --------QAEQGVDYFTIHAGV---LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 309 --------QAeqGVDfmTIHaGv---~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
-.+.|.|.+-||+|- .-+.+.-..++.+. ..|||+.- +-.|+.+-.+.|.+-+-..-|++
T Consensus 169 ~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D--~YGGs~en-------r~r~~~ei~~av~~~~~~~~v~~ 239 (407)
T 3tjl_A 169 AYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTD--EYGGSIEN-------RARLILELIDHLSTIVGADKIGI 239 (407)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCS--TTSSSHHH-------HHHHHHHHHHHHHHHHCGGGEEE
T ss_pred HHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCC--cCCCChhh-------ChHHHHHHHHHHHHHhCCCeEEE
Confidence 235799999999974 22333333344454 67999642 33577788888777775432443
No 280
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=28.52 E-value=2.8e+02 Score=28.26 Aligned_cols=25 Identities=8% Similarity=0.104 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.++|.+..++-.++|.+.+-||.|
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g 188 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATP 188 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 7899999999999999999999976
No 281
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=28.49 E-value=4.4e+02 Score=26.57 Aligned_cols=96 Identities=15% Similarity=0.051 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHH---hH-
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDIC---NQ- 372 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~---k~- 372 (667)
.+.+++.+..++-.++|.+.+-||.|-.. +| ..| ..+..++++ |+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~----------------~~----------~~~-----~~~~~~e~v~avr~a 196 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP----------------VS----------WAP-----DVKMDLKACAAVREA 196 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT----------------ST----------TCC-----CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc----------------cc----------ccc-----chHHHHHHHHHHHHH
Confidence 47899999999999999999999987421 11 122 333333333 33
Q ss_pred --hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 373 --YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 373 --YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
.|+.|.+ |+|..-...|.+.+ .++..++||. +||-| +|-+.++.--++.++
T Consensus 197 ~g~d~~l~v----------Dan~~~~~~~a~~~---~~~l~~~~i~-~iE~P--~~~~~~~~~~~l~~~ 249 (382)
T 1rvk_A 197 VGPDIRLMI----------DAFHWYSRTDALAL---GRGLEKLGFD-WIEEP--MDEQSLSSYKWLSDN 249 (382)
T ss_dssp HCTTSEEEE----------ECCTTCCHHHHHHH---HHHHHTTTCS-EEECC--SCTTCHHHHHHHHHH
T ss_pred hCCCCeEEE----------ECCCCCCHHHHHHH---HHHHHhcCCC-EEeCC--CChhhHHHHHHHHhh
Confidence 3666665 55544334454444 4455578887 68988 455666665555544
No 282
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=28.35 E-value=1.1e+02 Score=31.50 Aligned_cols=79 Identities=16% Similarity=0.082 Sum_probs=52.8
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCC
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGV 314 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGV 314 (667)
++++=++.++...++|||.|+= =.-.+.+++|+ |-+..++|+=-.++ . +|....+| ..+-++.||
T Consensus 173 g~~~ai~Ra~ay~eAGAD~i~~-e~~~~~~~~~~-i~~~~~~P~~~n~~-----~-~g~tp~~~-------~~eL~~lGv 237 (305)
T 3ih1_A 173 GLDEAIERANAYVKAGADAIFP-EALQSEEEFRL-FNSKVNAPLLANMT-----E-FGKTPYYS-------AEEFANMGF 237 (305)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE-TTCCSHHHHHH-HHHHSCSCBEEECC-----T-TSSSCCCC-------HHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-cCCCCHHHHHH-HHHHcCCCEEEeec-----C-CCCCCCCC-------HHHHHHcCC
Confidence 5889999999999999999984 33356677764 66677777621121 1 23334455 445567899
Q ss_pred CEEEEecccccccc
Q 005965 315 DYFTIHAGVLLRYI 328 (667)
Q Consensus 315 DfmTIHaGv~~~~l 328 (667)
.++.+.....+...
T Consensus 238 ~~v~~~~~~~raa~ 251 (305)
T 3ih1_A 238 QMVIYPVTSLRVAA 251 (305)
T ss_dssp SEEEECSHHHHHHH
T ss_pred CEEEEchHHHHHHH
Confidence 99988776654443
No 283
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=28.08 E-value=2.8e+02 Score=28.57 Aligned_cols=63 Identities=14% Similarity=-0.011 Sum_probs=36.7
Q ss_pred HHHcCCCCHHHHHHHHHcCCCHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHHH
Q 005965 166 YAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW 245 (667)
Q Consensus 166 ~Ar~GiIT~EMe~VA~~E~i~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~ 245 (667)
.|+.++-+.=---.++..|++.-.+.- |+ .+ -++.+++.++ ..++++=+++++.
T Consensus 90 ~A~saiD~ALwDl~gK~~g~Pv~~LLG----G~-------~r-----------~~v~~y~~~~----~~~~e~~~~~a~~ 143 (401)
T 3sbf_A 90 NAISGVDMALWDIKAKLAGMPLHQLFG----GK-------SR-----------DAIPVYTHAT----SDTMEGIYDLVEG 143 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHTSBHHHHHT----CC-------SS-----------SSEEEEEEEE----ESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHhHhCCcHHHHhC----CC-------cC-----------CeeeEEEeCC----CCCHHHHHHHHHH
Confidence 466665555555567777777654442 21 01 1233444433 2357777788888
Q ss_pred HHHhCCcEe
Q 005965 246 ATMWGADTV 254 (667)
Q Consensus 246 A~~~GADtV 254 (667)
+++.|-.+|
T Consensus 144 ~~~~G~~~~ 152 (401)
T 3sbf_A 144 FLEKGYKHI 152 (401)
T ss_dssp HHHTTCCEE
T ss_pred HHHcCCCEE
Confidence 888998776
No 284
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=28.02 E-value=1.9e+02 Score=29.01 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.+.|.+..++-.++|.+.+-||.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g 165 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVG 165 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeC
Confidence 6788999999989999999999988
No 285
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=27.99 E-value=3.4e+02 Score=24.58 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=24.9
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.+...+.+++.+.++.-.+.|+|++.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~G~~~iev~~~ 44 (205)
T 1wa3_A 15 VLRANSVEEAKEKALAVFEGGVHLIEITFT 44 (205)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred EEecCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 445678899999888888889999999863
No 286
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=27.95 E-value=70 Score=32.25 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhcCCeEEeeC
Q 005965 402 TQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 402 ~LGEL~krA~e~gVQVMIEG 421 (667)
.|.+|.+.|++.|..+|+|-
T Consensus 157 ~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 157 LAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEe
Confidence 45677888999999999986
No 287
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=27.93 E-value=1e+02 Score=31.68 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHh---H---h
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICN---Q---Y 373 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k---~---Y 373 (667)
|.|.+..++-.++|.+.+-||.|-. |.++ . + .+..++.+++++ + .
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~------------------~~~~-------~--~--~~~~~~~~e~v~avR~~~g~ 200 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRG------------------GRHM-------P--L--WEGTKRDIAIVRGISEVAGP 200 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHH------------------HHTS-------C--H--HHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcC------------------cccC-------C--c--cccHHHHHHHHHHHHHHhCC
Confidence 7788888888899999999997632 1111 1 1 223333333333 2 3
Q ss_pred ceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHH
Q 005965 374 DVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLE 439 (667)
Q Consensus 374 DVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~ 439 (667)
|+.|.+ |+|..-.+.|.+.+ .++..++|+. +||-| +| ++++.--++.++
T Consensus 201 d~~l~v----------Dan~~~~~~~ai~~---~~~l~~~~i~-~iE~P--~~-~d~~~~~~l~~~ 249 (392)
T 3p3b_A 201 AGKIMI----------DANNAYNLNLTKEV---LAALSDVNLY-WLEEA--FH-EDEALYEDLKEW 249 (392)
T ss_dssp TCCEEE----------ECTTCCCHHHHHHH---HHHTTTSCEE-EEECS--SS-CCHHHHHHHHHH
T ss_pred CCeEEE----------ECCCCCCHHHHHHH---HHHHHhcCCC-EEecC--Cc-ccHHHHHHHHHh
Confidence 555554 55544344454433 3444467775 78988 45 777766666555
No 288
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=27.87 E-value=5.4e+02 Score=29.80 Aligned_cols=26 Identities=8% Similarity=0.127 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
+.++|.+.++.-.+.|+|++.||++-
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~ 671 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSC 671 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 56888888777778999999999974
No 289
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=27.57 E-value=1.6e+02 Score=29.25 Aligned_cols=87 Identities=9% Similarity=0.013 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh----
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY---- 373 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y---- 373 (667)
.+++|.+.+++- +.|+|++.||++-- .+. |.+ ++ ....++.+-.+.|-+.+.++
T Consensus 151 ~~~~~~~aa~~~-~~g~d~iein~~sP-----~~~---------g~~----~~---~~~~~~~~il~~vr~~~~~~~~~~ 208 (336)
T 1f76_A 151 GKDDYLICMEKI-YAYAGYIAINISSP-----NTP---------GLR----TL---QYGEALDDLLTAIKNKQNDLQAMH 208 (336)
T ss_dssp THHHHHHHHHHH-GGGCSEEEEECCCS-----SST---------TGG----GG---GSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH-hccCCEEEEEccCC-----CCC---------Ccc----cc---cCHHHHHHHHHHHHHHHHhhhhcc
Confidence 468888887754 45999999998621 111 211 11 11334444455555554433
Q ss_pred --ceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 374 --DVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 374 --DVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
|+-+.+= ++|+ .+.. .+-++++++.++||..++
T Consensus 209 g~~~Pv~vK--i~~~-----~~~~------~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 209 HKYVPIAVK--IAPD-----LSEE------ELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp TSCCCEEEE--CCSC-----CCHH------HHHHHHHHHHHTTCSEEE
T ss_pred cccCceEEE--ecCC-----CCHH------HHHHHHHHHHHcCCcEEE
Confidence 6665553 6665 1221 245678888999998665
No 290
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=27.39 E-value=89 Score=33.71 Aligned_cols=129 Identities=13% Similarity=0.163 Sum_probs=73.8
Q ss_pred hhHHHHHHHHhH-hceeEeccCCCCCC--------------CccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 361 EHWDEILDICNQ-YDVALSIGDGLRPG--------------SIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 361 e~FD~ileI~k~-YDVtlSLGDGLRPG--------------~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
+.|-.+++..++ .|+-|||. ..|. -|.|++.. .+ -++...|.++|+.|.+.++
T Consensus 141 e~~~~~Vk~V~e~~dvPlsID--~dp~vleaale~~~d~~pLIns~t~e-n~------~~~~~la~~y~~~vV~~~~--- 208 (445)
T 2h9a_A 141 ATFAKAVATAREVTDLPFILI--GTPEQLAAALETEGANNPLLYAATAD-NY------EQMVELAKKYNVPLTVSAK--- 208 (445)
T ss_dssp HHHHHHHHHHHHHCCSCEEEE--SCHHHHHHHHHHHGGGCCEEEEECTT-TH------HHHHHHHHHHTCCEEEECS---
T ss_pred HHHHHHHHHHHHhcCCCEEEE--CCHHHHHHHHHhcCCCCCEEEECCHH-HH------HHHHHHHHHhCCeEEEEcC---
Confidence 555667777766 49889886 5553 33344433 33 3456667899999999987
Q ss_pred CCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHHHHH----hh------hcccceeeecCcccccCCCChh
Q 005965 426 PMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAAN----IG------ALGTALLCYVTPKEHLGLPNRD 495 (667)
Q Consensus 426 Pl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~----aa------~~GadfLCYVTPaEHLgLP~~e 495 (667)
-++..+..+++-++ .|-+=.+|=|++ .++.-.+=... ++ ..|--+||-||-+ +
T Consensus 209 ~l~~l~~lv~~a~~--~Gi~~IiLDP~~-------~~~~~sl~~~~~IR~~al~~~d~~lg~P~i~~vs~~--------d 271 (445)
T 2h9a_A 209 GLDALAELVQKITA--LGYKNLILDPQP-------ENISEGLFYQTQIRRLAIKKLFRPFGYPTIAFALDE--------N 271 (445)
T ss_dssp SHHHHHHHHHHHHH--TTCCCEEEECCC-------SSHHHHHHHHHHHHHHHHHSCCGGGCSCBEEECCCS--------S
T ss_pred CHHHHHHHHHHHHH--CCCCcEEEcCCc-------hhHHHHHHHHHHHHHhhhcCCCcccCCCeeecCCch--------h
Confidence 45555555555554 233444566664 11222222111 01 2444566667655 6
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCc
Q 005965 496 DVKAGVIAYKIAAHAADLAKGHP 518 (667)
Q Consensus 496 DVreGVIA~kIAAHaaDlaKg~p 518 (667)
+..|++.|.=....=|||..-|.
T Consensus 272 ~~~ea~lA~~~~~~GasIl~~~~ 294 (445)
T 2h9a_A 272 PYQAVMEASVYIAKYAGIIVLNT 294 (445)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCeEEEecC
Confidence 66788877766666666665443
No 291
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=27.38 E-value=5.3e+02 Score=26.61 Aligned_cols=29 Identities=10% Similarity=-0.005 Sum_probs=20.7
Q ss_pred CCChHHHHHHHHHHHHhCCcEeeecCCCCC
Q 005965 233 ASSIEEEVYKVQWATMWGADTVMDLSTGRH 262 (667)
Q Consensus 233 ~~~ieeEveKl~~A~~~GADtVMDLSTGgd 262 (667)
..+.++=+++++.+++.|-.++ -+-.|++
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~-KlK~g~~ 177 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAV-KFDPAGA 177 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEE-EECCSCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEE-eeCCCCC
Confidence 3467777788888999998776 5655543
No 292
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=27.22 E-value=1.2e+02 Score=29.47 Aligned_cols=108 Identities=10% Similarity=0.162 Sum_probs=65.1
Q ss_pred cccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhc
Q 005965 334 RMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDK 413 (667)
Q Consensus 334 RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~ 413 (667)
++++|++|--.-...+....+- +.|+.+++| ..+.|+++-. .-+. .-.++++.|-++
T Consensus 32 ~lvav~d~~~~~~~~~~~~~g~--~~~~~~~~l---~~~~D~V~i~---tp~~---------------~h~~~~~~al~~ 88 (319)
T 1tlt_A 32 TLQGAWSPTRAKALPICESWRI--PYADSLSSL---AASCDAVFVH---SSTA---------------SHFDVVSTLLNA 88 (319)
T ss_dssp EEEEEECSSCTTHHHHHHHHTC--CBCSSHHHH---HTTCSEEEEC---SCTT---------------HHHHHHHHHHHT
T ss_pred EEEEEECCCHHHHHHHHHHcCC--CccCcHHHh---hcCCCEEEEe---CCch---------------hHHHHHHHHHHc
Confidence 5677777765544444444333 378888866 5678877632 1111 124666778899
Q ss_pred CCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhHH
Q 005965 414 DVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIG 468 (667)
Q Consensus 414 gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAIG 468 (667)
|.-|++|-|--.-+.+.++=+++.++ .+..+++ | ...=-.|.|..+-..||
T Consensus 89 G~~v~~eKP~~~~~~~~~~l~~~a~~--~g~~~~~-~-~~~r~~p~~~~~k~~i~ 139 (319)
T 1tlt_A 89 GVHVCVDKPLAENLRDAERLVELAAR--KKLTLMV-G-FNRRFAPLYGELKTQLA 139 (319)
T ss_dssp TCEEEEESSSCSSHHHHHHHHHHHHH--TTCCEEE-E-CGGGGCHHHHHHTTTGG
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHH--cCCeEEE-e-eecccCHHHHHHHHHhC
Confidence 99999999977766666655555554 4555544 2 23334455666555554
No 293
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=27.20 E-value=74 Score=31.86 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=51.0
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCC---------chH
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMH---------KIP 431 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~---------~I~ 431 (667)
..+++||+|+++|+|..++= =+|.. +...-+++++..+.|-.+-.-|=.|..+. +|.
T Consensus 74 ~~~~rlL~lL~~~~v~aTfF---v~g~~-----------~~~~p~~v~~i~~~GhEIg~H~~~H~~~~~~s~~~~~~ei~ 139 (326)
T 3qbu_A 74 VGIPRLLKLFKKYHLPATWF---VPGHS-----------IETFPEQMKMIVDAGHEVGAHGYSHENPIAMSTKQEEDVLL 139 (326)
T ss_dssp THHHHHHHHHHHTTCCCEEE---CCHHH-----------HHHCHHHHHHHHTTTCEEEBCCSSCCCGGGSCHHHHHHHHH
T ss_pred HhHHHHHHHHHHcCCCEEEE---EEhHH-----------hhhCHHHHHHHHHcCCEEEeCCCCCcChhhCCHHHHHHHHH
Confidence 56899999999999854431 02211 11235788999999999999999998763 455
Q ss_pred HHHHHHHHhcCCCCccc
Q 005965 432 ENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 432 ~Nv~lqk~lC~~APfYv 448 (667)
...++-+++++..|-+.
T Consensus 140 ~~~~~l~~~~G~~p~~f 156 (326)
T 3qbu_A 140 KSVELIKDLTGKAPTGY 156 (326)
T ss_dssp HHHHHHHHHHSSCCCEE
T ss_pred HHHHHHHHHHCCCCcEE
Confidence 55556667777666443
No 294
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=27.14 E-value=1.8e+02 Score=27.75 Aligned_cols=65 Identities=26% Similarity=0.301 Sum_probs=38.5
Q ss_pred HHHH-HHHHHHhCCcEeeecCCCC-----ChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhc
Q 005965 239 EVYK-VQWATMWGADTVMDLSTGR-----HIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQ 312 (667)
Q Consensus 239 EveK-l~~A~~~GADtVMDLSTGg-----di~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeq 312 (667)
|+.+ ++.+.++|||.| ..|||. +++.+++ +-+... +.+||-- .|.+. |+++.++.|+ .
T Consensus 133 ~~~~~a~~a~eaGad~I-~tstg~~~gga~~~~i~~-v~~~v~---~~ipVia-----~GGI~--t~~da~~~l~----a 196 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFI-KTSTGFAPRGTTLEEVRL-IKSSAK---GRIKVKA-----SGGIR--DLETAISMIE----A 196 (225)
T ss_dssp HHHHHHHHHHHHTCSEE-ECCCSCSSSCCCHHHHHH-HHHHHT---TSSEEEE-----ESSCC--SHHHHHHHHH----T
T ss_pred HHHHHHHHHHHhCCCEE-EECCCCCCCCCCHHHHHH-HHHHhC---CCCcEEE-----ECCCC--CHHHHHHHHH----h
Confidence 4444 678899999999 788853 3333332 111110 2445432 34444 6888888884 6
Q ss_pred CCCEEEE
Q 005965 313 GVDYFTI 319 (667)
Q Consensus 313 GVDfmTI 319 (667)
|.|.+.+
T Consensus 197 GA~~iG~ 203 (225)
T 1mzh_A 197 GADRIGT 203 (225)
T ss_dssp TCSEEEE
T ss_pred CchHHHH
Confidence 8996543
No 295
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=27.02 E-value=2.8e+02 Score=28.11 Aligned_cols=64 Identities=6% Similarity=-0.009 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHhHhceeEe-ccCCC------CCCCccCCCcHHHHH-HHHHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 360 YEHWDEILDICNQYDVALS-IGDGL------RPGSIYDANDTAQFA-ELLTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 360 Ye~FD~ileI~k~YDVtlS-LGDGL------RPG~iaDA~D~AQ~~-EL~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
.+..++|-+.++++++.++ +.-.+ ..|.+.+. |+...+ -+..+-+..+.|.+.|+.+++=-||.
T Consensus 68 ~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~sp-d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~ 139 (393)
T 1xim_A 68 DGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSN-DRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGR 139 (393)
T ss_dssp HHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCS-SHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCC-CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 3678999999999999994 44333 23455443 433222 24456678888889999998876664
No 296
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=27.00 E-value=1.7e+02 Score=28.16 Aligned_cols=77 Identities=18% Similarity=0.126 Sum_probs=0.0
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCC--ccCCCcHHHHHH-----HHHHHHHHHHHHhcCCe-EEeeC--CCCCCCCch
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGS--IYDANDTAQFAE-----LLTQGELTRRAWDKDVQ-VMNEG--PGHIPMHKI 430 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~--iaDA~D~AQ~~E-----L~~LGEL~krA~e~gVQ-VMIEG--PGHVPl~~I 430 (667)
+.|.+.+++|++.++..= .+-+|+ ..+..+....+| ...|.+|++.|.++||. +-||- .++--++.+
T Consensus 114 ~~~~~~i~~A~~lGa~~v---~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~ 190 (316)
T 3qxb_A 114 QHLKRAIDMTAAMEVPAT---GMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSA 190 (316)
T ss_dssp HHHHHHHHHHHHTTCCEE---EECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSH
T ss_pred HHHHHHHHHHHHcCCCEE---EecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCH
Q ss_pred HHHHHHHHHh
Q 005965 431 PENMQKQLEW 440 (667)
Q Consensus 431 ~~Nv~lqk~l 440 (667)
++-.++.+.+
T Consensus 191 ~~~~~l~~~v 200 (316)
T 3qxb_A 191 ADAARLMADL 200 (316)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
No 297
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=26.84 E-value=91 Score=32.20 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=40.8
Q ss_pred CCCCCChHHHHHHHHHHHHhCCcEeeecCCCCC-----hHHHHHHHHhcCCCCccc-ch
Q 005965 230 SAVASSIEEEVYKVQWATMWGADTVMDLSTGRH-----IHETREWILRNSAVPVGT-VP 282 (667)
Q Consensus 230 S~~~~~ieeEveKl~~A~~~GADtVMDLSTGgd-----i~~~R~~Il~nspvPVGT-VP 282 (667)
-++....++..+.+..+++.|+|.||==|||-. ++++-+.|=+++++|+=- -|
T Consensus 46 DPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 46 DPFKVPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp CTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEEECC
Confidence 345556777788899999999999997788766 777777777778777765 44
No 298
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=26.73 E-value=5.8e+02 Score=26.80 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred chhhhHHHHhcCCCCC--------------------CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccc
Q 005965 281 VPIYQALEKVDGIAEN--------------------LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVS 340 (667)
Q Consensus 281 VPIYqAl~k~~g~~~~--------------------lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVS 340 (667)
+|+||-| ||...+ .+.|.+.+.+++..++|..-+=++.|.......
T Consensus 112 ~Pv~~LL---GG~~r~~v~~y~~~~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~----------- 177 (433)
T 3rcy_A 112 RPVWALL---GGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRG----------- 177 (433)
T ss_dssp SBGGGGT---TCCSCSSEEEEEECCCCTTSCHHHHTTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTC-----------
T ss_pred CcHHHHc---CCCCCCeEEEEEEEcccCCcccccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCccccc-----------
Q ss_pred cccHHHHHHHHHcCCcCchhhhHHHHHHHHhH------hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcC
Q 005965 341 RGGSIHAKWCLAYHKENFAYEHWDEILDICNQ------YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKD 414 (667)
Q Consensus 341 RGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~------YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~g 414 (667)
-..|..+..++.++++++ .|+.|.+ |+|-.-...|.+.+++..+. +|
T Consensus 178 --------------G~~~~~~~~~~d~e~v~avR~avG~d~~L~v----------Dan~~~t~~~A~~~~~~Le~---~~ 230 (433)
T 3rcy_A 178 --------------GHMPAMTDISLSVEFCRKIRAAVGDKADLLF----------GTHGQFTTAGAIRLGQAIEP---YS 230 (433)
T ss_dssp --------------CBCCCHHHHHHHHHHHHHHHHHHTTSSEEEE----------CCCSCBCHHHHHHHHHHHGG---GC
T ss_pred --------------CCCcchhhHHHHHHHHHHHHHHhCCCCeEEE----------eCCCCCCHHHHHHHHHHhhh---cC
Q ss_pred CeEEeeCCCCCCCCchHHHHHHHHHh
Q 005965 415 VQVMNEGPGHIPMHKIPENMQKQLEW 440 (667)
Q Consensus 415 VQVMIEGPGHVPl~~I~~Nv~lqk~l 440 (667)
+. +||=| +|-+.++..-++.++.
T Consensus 231 i~-~iEeP--~~~~~~~~~~~l~~~~ 253 (433)
T 3rcy_A 231 PL-WYEEP--VPPDNVGAMAQVARAV 253 (433)
T ss_dssp CS-EEECC--SCTTCHHHHHHHHHHS
T ss_pred CC-EEECC--CChhhHHHHHHHHhcc
No 299
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=26.68 E-value=2.5e+02 Score=28.24 Aligned_cols=105 Identities=7% Similarity=0.028 Sum_probs=0.0
Q ss_pred chhhhHHHHhcCCCCCC----------CHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHH
Q 005965 281 VPIYQALEKVDGIAENL----------SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWC 350 (667)
Q Consensus 281 VPIYqAl~k~~g~~~~l----------t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wm 350 (667)
+|+||.| ||....+ +.+.|.+..++-.++|.+.+-||.|.
T Consensus 117 ~Pl~~ll---Gg~~~~~~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~~--------------------------- 166 (368)
T 1sjd_A 117 RSFAAEL---GSVRDSVPCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIEP--------------------------- 166 (368)
T ss_dssp CBHHHHH---TCCCSEEEBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECBT---------------------------
T ss_pred CcHHHHh---CCCCCCccceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecCc---------------------------
Q ss_pred HHcCCcCchhhhHHHHHHHH-hHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCc
Q 005965 351 LAYHKENFAYEHWDEILDIC-NQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHK 429 (667)
Q Consensus 351 l~h~~ENpLYe~FD~ileI~-k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~ 429 (667)
....+.+..|.+-+ ...++.+..--|+-+ .. -++.++..++||. +||-| +|-++
T Consensus 167 ------~~~~e~v~avr~~~g~~~~l~vDan~~~~~---------------~~-~~~~~~l~~~~i~-~iE~P--~~~~~ 221 (368)
T 1sjd_A 167 ------GWDVEPVRAVRERFGDDVLLQVDANTAYTL---------------GD-APQLARLDPFGLL-LIEQP--LEEED 221 (368)
T ss_dssp ------TBSHHHHHHHHHHHCTTSEEEEECTTCCCG---------------GG-HHHHHTTGGGCCS-EEECC--SCTTC
T ss_pred ------hhHHHHHHHHHHhcCCCceEEEeccCCCCH---------------HH-HHHHHHHHhcCCC-eEeCC--CChhh
Q ss_pred hHHHHHHHHHh
Q 005965 430 IPENMQKQLEW 440 (667)
Q Consensus 430 I~~Nv~lqk~l 440 (667)
++..-++.++.
T Consensus 222 ~~~~~~l~~~~ 232 (368)
T 1sjd_A 222 VLGHAELARRI 232 (368)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhC
No 300
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=26.67 E-value=2.3e+02 Score=29.54 Aligned_cols=92 Identities=17% Similarity=0.180 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHH-HHHHHHhH---
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD-EILDICNQ--- 372 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD-~ileI~k~--- 372 (667)
.+.+.|.+..++-.++|.+.+-||.| | + -.+| ++++-.|+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g--------------------~-------------~---~~~d~e~v~avR~a~G 240 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVG--------------------A-------------N---VQDDIRRCRLARAAIG 240 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC--------------------S-------------C---HHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC--------------------C-------------C---HHHHHHHHHHHHHhcC
Confidence 58899999999999999999999987 1 1 1233 33444444
Q ss_pred hceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHh
Q 005965 373 YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEW 440 (667)
Q Consensus 373 YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~l 440 (667)
.|+.|.+ |+|-.-.+.|.+. +.++..++||. +||-| +|-++++..-++.+++
T Consensus 241 ~d~~l~v----------Dan~~~~~~~a~~---~~~~l~~~~i~-~iEqP--~~~~d~~~~~~l~~~~ 292 (441)
T 2hxt_A 241 PDIAMAV----------DANQRWDVGPAID---WMRQLAEFDIA-WIEEP--TSPDDVLGHAAIRQGI 292 (441)
T ss_dssp SSSEEEE----------ECTTCCCHHHHHH---HHHTTGGGCCS-CEECC--SCTTCHHHHHHHHHHH
T ss_pred CCCeEEE----------ECCCCCCHHHHHH---HHHHHHhcCCC-eeeCC--CCHHHHHHHHHHHhhC
Confidence 3566644 5554434444443 34444567887 68988 5667777666665553
No 301
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=26.65 E-value=2.2e+02 Score=29.73 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=55.3
Q ss_pred HHHHHHHHHhCCcEeeecCCCCChHHHH---HHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCE
Q 005965 240 VYKVQWATMWGADTVMDLSTGRHIHETR---EWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDY 316 (667)
Q Consensus 240 veKl~~A~~~GADtVMDLSTGgdi~~~R---~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDf 316 (667)
++.+.|++++|+|.|.==+++++...+. +++.+..| .+|+. . |.+. |.+. ...-.+.|+|+
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p----~~pvi-----~-G~v~--t~~~----a~~~~~~Gad~ 298 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFP----NRTLI-----A-GNIA--TAEG----ARALYDAGVDV 298 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCS----SSCEE-----E-EEEC--SHHH----HHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCC----CCcEe-----C-CCcc--CHHH----HHHHHHcCCCE
Confidence 4567888899999986223455554332 33344441 34443 2 3222 3333 33444799999
Q ss_pred EEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCC
Q 005965 317 FTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLR 384 (667)
Q Consensus 317 mTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLR 384 (667)
+.+=.| .+.+.+ +.++. +-+.|-.+..-++.+.++++|+.+-..=|+|
T Consensus 299 I~vg~g---------~g~~~~-----tr~~~------~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~ 346 (491)
T 1zfj_A 299 VKVGIG---------PGSICT-----TRVVA------GVGVPQVTAIYDAAAVAREYGKTIIADGGIK 346 (491)
T ss_dssp EEECSS---------CCTTBC-----HHHHT------CCCCCHHHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred EEECcc---------CCcceE-----Eeeec------CCCCCcHHHHHHHHHHHhhcCCCEEeeCCCC
Confidence 976222 011110 01111 2256655555566666666777665544444
No 302
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=26.55 E-value=1.9e+02 Score=29.76 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.+.+++...+..-.+.||||+++|.+.
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~ 273 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVD 273 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 466778877777778999999999863
No 303
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=26.42 E-value=99 Score=30.21 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=60.8
Q ss_pred CcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHh
Q 005965 333 KRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWD 412 (667)
Q Consensus 333 ~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e 412 (667)
-++++|++|--.-..++...++-. |+.++++++= .+.|+++-. +-...- .++++.|-+
T Consensus 28 ~~l~av~d~~~~~~~~~~~~~~~~---~~~~~~~l~~-~~~D~V~i~------------tp~~~h------~~~~~~al~ 85 (331)
T 4hkt_A 28 ARLVAVADAFPAAAEAIAGAYGCE---VRTIDAIEAA-ADIDAVVIC------------TPTDTH------ADLIERFAR 85 (331)
T ss_dssp EEEEEEECSSHHHHHHHHHHTTCE---ECCHHHHHHC-TTCCEEEEC------------SCGGGH------HHHHHHHHH
T ss_pred cEEEEEECCCHHHHHHHHHHhCCC---cCCHHHHhcC-CCCCEEEEe------------CCchhH------HHHHHHHHH
Confidence 367788888777666666655543 8888888752 256776642 111111 356677889
Q ss_pred cCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccc
Q 005965 413 KDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 413 ~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYv 448 (667)
+|.-|++|-|--+-+.+.++=+++.++ .+..|++
T Consensus 86 ~gk~v~~EKP~~~~~~~~~~l~~~a~~--~g~~~~v 119 (331)
T 4hkt_A 86 AGKAIFCEKPIDLDAERVRACLKVVSD--TKAKLMV 119 (331)
T ss_dssp TTCEEEECSCSCSSHHHHHHHHHHHHH--TTCCEEE
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHH--cCCeEEE
Confidence 999999999977777777766666666 4555543
No 304
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=26.03 E-value=92 Score=32.31 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecccccc---------------------ccccccCccc-----------------Cc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLR---------------------YIPLTAKRMT-----------------GI 338 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~---------------------~l~~~~~Rvt-----------------gI 338 (667)
-+.+++.+.+++..++|...+-++.|..-. .++....|+- +-
T Consensus 152 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~~ 231 (421)
T 4hnl_A 152 DNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHER 231 (421)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEecccccc
Confidence 478999999999999999999999885210 0110000000 00
Q ss_pred cccccHH-HHHHHHHcC---CcCch-hhhHHHHHHHHhHhceeEeccCCCCCCCccC--------CC-----cHHHHHHH
Q 005965 339 VSRGGSI-HAKWCLAYH---KENFA-YEHWDEILDICNQYDVALSIGDGLRPGSIYD--------AN-----DTAQFAEL 400 (667)
Q Consensus 339 VSRGGSi-~a~Wml~h~---~ENpL-Ye~FD~ileI~k~YDVtlSLGDGLRPG~iaD--------A~-----D~AQ~~EL 400 (667)
-+.--++ +++++...+ =|-|+ .++++.+-++.++.++-|.+|.-+.- ..| |- |-.++.-|
T Consensus 232 ~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~--~~~~~~~i~~~a~d~v~~d~~~~GGi 309 (421)
T 4hnl_A 232 LHPNQAIQFAKAAEPYQLFFLEDILPPDQSHWLTQLRSQSATPIATGELFNN--PMEWQELVKNRQIDFMRAHVSQIGGI 309 (421)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHTTCCCCEEECTTCCS--GGGTHHHHHTTCCSEECCCGGGGTSH
T ss_pred CCHHHHHHHHHHhhhhhhcccccCCcccchHHHHHHHhcCCCCeecCcceeh--hHHHHHHHhcCCceEEEeCCCCCCCH
Confidence 0111111 233332221 12232 35788889999999999999876631 111 11 22223334
Q ss_pred HHHHHHHHHHHhcCCeEEeeCCCC
Q 005965 401 LTQGELTRRAWDKDVQVMNEGPGH 424 (667)
Q Consensus 401 ~~LGEL~krA~e~gVQVMIEGPGH 424 (667)
-..-++++.|.++|++||+-+++.
T Consensus 310 te~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 310 TPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp HHHHHHHHHHHHTTCEECCCCCSS
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcc
Confidence 445566777888999998765543
No 305
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=25.94 E-value=5.6e+02 Score=26.41 Aligned_cols=170 Identities=14% Similarity=0.119 Sum_probs=94.1
Q ss_pred CCCceEeecCCceeEeeccccCCCCC----ChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhh
Q 005965 209 ELEPMIVGRNFLVKVNANIGNSAVAS----SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIY 284 (667)
Q Consensus 209 ~~~p~~IG~gl~tKVNANIGtS~~~~----~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIY 284 (667)
.+.-...| .|+...+.-++... ..+-|+.-++.|.++|+-.++.-.....+.++... ..-| ..+.+|
T Consensus 61 d~st~i~G----~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~----~~~~-~~fQly 131 (380)
T 1p4c_A 61 SLQAEVLG----KRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQ----CDGD-LWFQLY 131 (380)
T ss_dssp BCCEEETT----EEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHH----CCSC-EEEEEC
T ss_pred cceeEECC----eecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhc----cCCC-eEEEEE
Confidence 34444555 34555666666522 55778888999999998766553222346665442 1111 111222
Q ss_pred hHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCE--EEEeccccccc---------ccc--ccCc-----ccCccccccHHH
Q 005965 285 QALEKVDGIAENLSWEVFRDTLIEQAEQGVDY--FTIHAGVLLRY---------IPL--TAKR-----MTGIVSRGGSIH 346 (667)
Q Consensus 285 qAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDf--mTIHaGv~~~~---------l~~--~~~R-----vtgIVSRGGSi~ 346 (667)
- .. ++...+.+++-.+.|+.. +|+-.-+.-.. ++. .... +..+...|++-+
T Consensus 132 ~---------~~--~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~al 200 (380)
T 1p4c_A 132 V---------IH--REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQ 200 (380)
T ss_dssp C---------SS--HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTH
T ss_pred e---------ch--HHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHH
Confidence 0 01 355566666667778744 44443221110 110 0111 112333566777
Q ss_pred HHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 347 AKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 347 a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
+.|+...- +|-. .+|.|-+|.+.+++-+.++ |. . -.|.+++|.++||..++=
T Consensus 201 a~~~~~~~--~p~~-~~~~i~~i~~~~~~Pv~vk-gv--------~----------t~e~a~~a~~aGad~I~v 252 (380)
T 1p4c_A 201 AALMSRQM--DASF-NWEALRWLRDLWPHKLLVK-GL--------L----------SAEDADRCIAEGADGVIL 252 (380)
T ss_dssp HHHTSSCC--CTTC-CHHHHHHHHHHCCSEEEEE-EE--------C----------CHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhhc--Cccc-cHHHHHHHHHhcCCCEEEE-ec--------C----------cHHHHHHHHHcCCCEEEE
Confidence 88864211 3322 4688888999999999987 22 1 125688999999997765
No 306
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=25.93 E-value=5.7e+02 Score=26.48 Aligned_cols=77 Identities=9% Similarity=0.033 Sum_probs=50.8
Q ss_pred cCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHH----------------HHHHHHHHHHHHHHhcCCeEEe
Q 005965 356 ENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQF----------------AELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 356 ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~----------------~EL~~LGEL~krA~e~gVQVMI 419 (667)
|=|+- +++.+-++.++.++-+.+|..+. +..|..++ .-|-..-+++..|.++|++||+
T Consensus 244 EqP~~-d~~~~~~l~~~~~iPIa~dE~~~-----~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 317 (398)
T 4dye_A 244 EDPCV-GIEGMAQVKAKVRIPLCTNMCVV-----RFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNL 317 (398)
T ss_dssp ECCSS-HHHHHHHHHHHCCSCEEESSSCC-----SGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCC-CHHHHHHHHhhCCCCEEeCCcCC-----CHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 45666 88999999999999999987653 22222222 2233344577889999999999
Q ss_pred eCCCCCCCCchHHHHHHHHHhc
Q 005965 420 EGPGHIPMHKIPENMQKQLEWC 441 (667)
Q Consensus 420 EGPGHVPl~~I~~Nv~lqk~lC 441 (667)
-+.+.+. |..+..+|.-.+
T Consensus 318 h~~~e~~---i~~aa~l~laaa 336 (398)
T 4dye_A 318 HSGGELG---IATAAHLAVVSS 336 (398)
T ss_dssp CCSCCCH---HHHHHHHHHHHT
T ss_pred cCCcchH---HHHHHHHHHHhc
Confidence 7655543 455555555543
No 307
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=25.83 E-value=1.8e+02 Score=30.31 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=22.6
Q ss_pred CCH-HHHHHHHHHHHhcCCCEEEEecc
Q 005965 297 LSW-EVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 297 lt~-e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.+. |.|.+..++-.++|.+.+-||.|
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g 209 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIG 209 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCC
Confidence 355 88999999989999999999977
No 308
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=25.81 E-value=21 Score=35.01 Aligned_cols=19 Identities=21% Similarity=0.118 Sum_probs=13.8
Q ss_pred HHHHHHHHhCCcEeeecCCC
Q 005965 241 YKVQWATMWGADTVMDLSTG 260 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTG 260 (667)
+.++.+.++|||.| |.+..
T Consensus 91 ~~~~~~~~aGad~v-~~~~~ 109 (297)
T 2zbt_A 91 VEAMILEAIGVDFI-DESEV 109 (297)
T ss_dssp HHHHHHHHTTCSEE-EEETT
T ss_pred HHHHHHHHCCCCEE-eeeCC
Confidence 44666778999999 66543
No 309
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=25.66 E-value=5.2e+02 Score=25.87 Aligned_cols=66 Identities=23% Similarity=0.168 Sum_probs=32.0
Q ss_pred HHHHhCCcEe-eecCCC-------CC-----hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHh
Q 005965 245 WATMWGADTV-MDLSTG-------RH-----IHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAE 311 (667)
Q Consensus 245 ~A~~~GADtV-MDLSTG-------gd-----i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAe 311 (667)
.+.+.|+|.| +++++. +| +-++=++|-+..++||.- | +..-.++.++ +.+-.+
T Consensus 135 ~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~v--------K--~~~~~~~~~~----a~~a~~ 200 (349)
T 1p0k_A 135 AVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIV--------K--EVGFGMSKAS----AGKLYE 200 (349)
T ss_dssp HHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEE--------E--EESSCCCHHH----HHHHHH
T ss_pred HHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEE--------E--ecCCCCCHHH----HHHHHH
Confidence 3556899987 555532 11 233444555555555431 1 1011245444 344456
Q ss_pred cCCCEEEE--ecccc
Q 005965 312 QGVDYFTI--HAGVL 324 (667)
Q Consensus 312 qGVDfmTI--HaGv~ 324 (667)
.|||++++ |-|.+
T Consensus 201 ~Gad~I~v~~~ggt~ 215 (349)
T 1p0k_A 201 AGAAAVDIGGYGGTN 215 (349)
T ss_dssp HTCSEEEEEC-----
T ss_pred cCCCEEEEcCCCCcc
Confidence 79999999 86643
No 310
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=25.58 E-value=4e+02 Score=24.62 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhcCCCEEEEec
Q 005965 301 VFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHa 321 (667)
.+.+.++.-++.|.|++-|..
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~ 35 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFA 35 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEES
T ss_pred cHHHHHHHHHHcCCCEEEEeC
Confidence 456667777788999888843
No 311
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=25.57 E-value=4.2e+02 Score=24.76 Aligned_cols=18 Identities=28% Similarity=0.327 Sum_probs=14.1
Q ss_pred HHHHHHHhcCCCEEEEec
Q 005965 304 DTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHa 321 (667)
+.++.-.+.|+|++++|.
T Consensus 99 ~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 99 NFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHCCCCEEEECC
Confidence 456666778999999994
No 312
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=25.47 E-value=1.6e+02 Score=26.85 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
+..++.|++..++|=- +-|||. . | +||-|++.++|++....- .+++.++..++
T Consensus 84 ~~~~~fI~~~~~~~~~-VLVHC~---------a----G-~sRS~~vv~ayLm~~~~~-----s~~~A~~~v~~------- 136 (188)
T 2esb_A 84 DPIADHIHSVEMKQGR-TLLHCA---------A----G-VSRSAALCLAYLMKYHAM-----SLLDAHTWTKS------- 136 (188)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECS---------S----S-SSHHHHHHHHHHHHHSCC-----CHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHcCCE-EEEECC---------C----C-CchHHHHHHHHHHHHcCC-----CHHHHHHHHHH-------
Confidence 4556666665555533 458993 2 3 499999999999886543 46777777776
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCch
Q 005965 380 GDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKI 430 (667)
Q Consensus 380 GDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I 430 (667)
.||...- ...++..|...-+... .+..|+ |++.| +-|+..+
T Consensus 137 ---~Rp~~~p---n~~f~~qL~~~e~~l~--~~~~~~-~~~~~-~~~~p~~ 177 (188)
T 2esb_A 137 ---CRPIIRP---NSGFWEQLIHYEFQLF--GKNTVH-MVSSP-VGMIPDI 177 (188)
T ss_dssp ---HCTTCCC---CHHHHHHHHHHHHHHH--SSCSCC-EECCT-TSCEEGG
T ss_pred ---HCCccCC---CHHHHHHHHHHHHHHc--cCCCee-eecCC-CCCCChh
Confidence 3665332 2345555554433221 233444 66666 4344443
No 313
>2kv9_B Integrin beta-3; platelet glycoprotein IIIA, GPIIIA, C adhesion; NMR {Homo sapiens}
Probab=25.45 E-value=21 Score=30.55 Aligned_cols=14 Identities=29% Similarity=0.681 Sum_probs=1.5
Q ss_pred ccCccccccHHHHH
Q 005965 335 MTGIVSRGGSIHAK 348 (667)
Q Consensus 335 vtgIVSRGGSi~a~ 348 (667)
-.|+|-||..++..
T Consensus 11 ~~~~~~~~~~~~~~ 24 (75)
T 2kv9_B 11 SSGLVPRGSHMSPE 24 (75)
T ss_dssp -----------CHH
T ss_pred cCCcccCchhHHHH
Confidence 45899999876544
No 314
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=25.42 E-value=2.3e+02 Score=26.08 Aligned_cols=114 Identities=14% Similarity=0.190 Sum_probs=68.3
Q ss_pred HHhCC--cEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHhcCCCEEEEecc
Q 005965 247 TMWGA--DTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 247 ~~~GA--DtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
.++|- .+|.||.....- .....+-.=.+|+... ...++. .+.+.+.|++..+.|-- +-|||.
T Consensus 68 ~~~gI~~~~Vi~l~~~~~~-------~~~~~~~~~~~p~~d~------~~~~l~~~~~~~~~~i~~~~~~~~~-VlVHC~ 133 (195)
T 2q05_A 68 PSSEVKFKYVLNLTMDKYT-------LPNSNINIIHIPLVDD------TTTDISKYFDDVTAFLSKCDQRNEP-VLVHCA 133 (195)
T ss_dssp TTSSSCCSEEEECSSSCCC-------CTTCCCEEEECCCCCS------SSCCCGGGHHHHHHHHHHHHHTTCC-EEEECS
T ss_pred HhCCCCCCEEEEECCCCCC-------cccCCcEEEEEEcCCC------CcccHHHHHHHHHHHHHHHHHcCCc-EEEEcC
Confidence 57899 999999876531 0111222223343321 112222 35677777776665533 669993
Q ss_pred ccccccccccCcccCccccccHHHHHHHHHcC-CcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHH
Q 005965 323 VLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH-KENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAE 399 (667)
Q Consensus 323 v~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~-~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~E 399 (667)
+| +||-|.+.+.|++... ..++ .-.+++.++.+++. ||+.+-...=..|+.+
T Consensus 134 ---------aG-----~~RSg~~v~~yL~~~~~~~~~-~v~~~~A~~~vr~~----------R~~~~~n~~f~~qL~~ 186 (195)
T 2q05_A 134 ---------AG-----VNRSGAMILAYLMSKNKESLP-MLYFLYVYHSMRDL----------RGAFVENPSFKRQIIE 186 (195)
T ss_dssp ---------SS-----SSHHHHHHHHHHHHHCCSSCH-HHHHHHHHHHHHHH----------HSCCCCCHHHHHHHHH
T ss_pred ---------CC-----CChHHHHHHHHHHHHhCCCcc-ccCHHHHHHHHHHH----------CCCCCCCHHHHHHHHH
Confidence 22 6899999999987754 4444 55688888888874 8987765433333333
No 315
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=25.34 E-value=1.1e+02 Score=28.67 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=41.5
Q ss_pred eEeeccccCCCCCChHHHHHHHHHHHHhCCcEe----eec-----CCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcC
Q 005965 222 KVNANIGNSAVASSIEEEVYKVQWATMWGADTV----MDL-----STGRHIHETREWILRNSAVPVGTVPIYQALEKVDG 292 (667)
Q Consensus 222 KVNANIGtS~~~~~ieeEveKl~~A~~~GADtV----MDL-----STGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g 292 (667)
|+...|= +.+..+. .+-++.+.+.|+|.| ||- ++. .++.+| +|-+.++.|+. |.+|
T Consensus 12 ~i~p~i~-a~d~~~~---~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~-~~~~i~-~l~~~~~~~~~-v~l~-------- 76 (230)
T 1rpx_A 12 IVSPSIL-SANFSKL---GEQVKAIEQAGCDWIHVDVMDGRFVPNITI-GPLVVD-SLRPITDLPLD-VHLM-------- 76 (230)
T ss_dssp EEEEBGG-GSCGGGH---HHHHHHHHHTTCCCEEEEEEBSSSSSCBCC-CHHHHH-HHGGGCCSCEE-EEEE--------
T ss_pred EEEEEee-cCCHHHH---HHHHHHHHHCCCCEEEEeeccCCccccccc-CHHHHH-HHHhccCCcEE-EEEE--------
Confidence 4555542 2333333 344567788899965 331 221 244444 34444444432 2221
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaG 322 (667)
+.+ .+ +.++.-++.|+|++++|..
T Consensus 77 -vnd--~~---~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 77 -IVE--PD---QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp -SSS--HH---HHHHHHHHTTCSEEEEECS
T ss_pred -ecC--HH---HHHHHHHHcCCCEEEEEec
Confidence 122 33 3444446789999999987
No 316
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=25.29 E-value=32 Score=31.81 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecccccccccc-----ccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHh
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPL-----TAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICN 371 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~-----~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k 371 (667)
.+.+++.+.|..-++.|+..+=++..-.-..-+. ........| .. ..+..|.....-.-..|+.+|++++.|+
T Consensus 34 ~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~d~~~~~a~ 111 (387)
T 4awe_A 34 NDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGD-PT-NTVFQWFEADGTQTIDVSPFDKVVDSAT 111 (387)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCC-TT-CCCSEEECTTSCEEECCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhcccccc-cc-chhhhhcccCccchhhhhhHHHHHHHHH
Confidence 4678888999999999999999875211111110 011110000 00 0000111111112245889999999999
Q ss_pred HhceeEec
Q 005965 372 QYDVALSI 379 (667)
Q Consensus 372 ~YDVtlSL 379 (667)
+|++.+.|
T Consensus 112 ~~gi~v~~ 119 (387)
T 4awe_A 112 KTGIKLIV 119 (387)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 99987654
No 317
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=25.08 E-value=56 Score=32.10 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=35.6
Q ss_pred cccCccccccHHHHHHHHHcCC--------cCchhhhHHHHHHHHhHhceeE----eccCCCCCCCccCCCc
Q 005965 334 RMTGIVSRGGSIHAKWCLAYHK--------ENFAYEHWDEILDICNQYDVAL----SIGDGLRPGSIYDAND 393 (667)
Q Consensus 334 RvtgIVSRGGSi~a~Wml~h~~--------ENpLYe~FD~ileI~k~YDVtl----SLGDGLRPG~iaDA~D 393 (667)
|-.|+=.-...-+...+....- -||+..+ +++++.|+++++.+ +||-|.+.|.-.+...
T Consensus 156 r~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~~ 226 (324)
T 4gac_A 156 KALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ-NELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPV 226 (324)
T ss_dssp SCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC-HHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSCC
T ss_pred eEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH-HHHHHHHHHhceeeeecCCcccCccccCCCCCcc
Confidence 5566544444444444333221 2444443 68999999999987 4888887776554433
No 318
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=24.80 E-value=49 Score=33.98 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCEEEEeccc----cccccccccCcccCccccccHHHHHHHHHcCCcCch--hhhHHHHHHHHhHhc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGV----LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA--YEHWDEILDICNQYD 374 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv----~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL--Ye~FD~ileI~k~YD 374 (667)
.++.+++.-...|...+.|+-|. .-+.++++...+-+|..+||++| ...+-+++ -+.++++++.+++|+
T Consensus 19 ~ir~vv~~a~~~g~~v~Gi~~G~~Gl~~~~~~~l~~~~v~~i~~~GGt~l-----gtsR~~~~~~~e~~~~~~~~l~~~~ 93 (319)
T 4a3s_A 19 AVRAVVRKAIYHDVEVYGIYNGYAGLISGKIEKLELGSVGDIIHRGGTKL-----YTARCPEFKTVEGREKGIANLKKLG 93 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEECSTTHHHHHCCEEEECGGGGTTCTTCCSCTT-----CCCCCHHHHSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEecchHHHcCCCeecCCHHHHHhHHhcCCCcc-----ccCCCCccccHHHHHHHHHHHHHcC
Confidence 35566666667899999999987 44566677788999999999986 23333332 257889999999998
Q ss_pred e--eEecc
Q 005965 375 V--ALSIG 380 (667)
Q Consensus 375 V--tlSLG 380 (667)
+ -+-+|
T Consensus 94 Id~L~~IG 101 (319)
T 4a3s_A 94 IEGLVVIG 101 (319)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEeC
Confidence 6 34444
No 319
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=24.77 E-value=2.4e+02 Score=29.29 Aligned_cols=163 Identities=18% Similarity=0.168 Sum_probs=89.5
Q ss_pred HHHHHHHHHHH-HhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhH---HH----HhcCCCCCCCHHHHHHHHHH
Q 005965 237 EEEVYKVQWAT-MWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQA---LE----KVDGIAENLSWEVFRDTLIE 308 (667)
Q Consensus 237 eeEveKl~~A~-~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqA---l~----k~~g~~~~lt~e~~~d~iee 308 (667)
-+-++|+..|+ +.|+-.++-|.-.|-.... .+. ...-|++--++.-. +. .....+..||.+++-++|+.
T Consensus 78 i~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~--~~~-~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~ 154 (362)
T 4ab4_A 78 VRGWNNVTKAVHAAGGRIFLQLWHVGRISHP--SYL-NGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEA 154 (362)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCTTSCCG--GGT-TTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCcccccc--ccc-CCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHH
Confidence 35567777776 5799999999877621100 000 11122222221100 00 00134678999999888876
Q ss_pred HH-------hcCCCEEEEeccc---cccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce--e
Q 005965 309 QA-------EQGVDYFTIHAGV---LLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV--A 376 (667)
Q Consensus 309 QA-------eqGVDfmTIHaGv---~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV--t 376 (667)
-+ +.|.|.+-||++- .-+.+.-..++.+. .-|||+.-+ -.|+.+-.+.+-+-+-...| -
T Consensus 155 f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD--~yGGslenR-------~rf~~eiv~aVr~~vg~~~v~vR 225 (362)
T 4ab4_A 155 YRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTD--RYGGSLENR-------ARLLLEVTDAAIEVWGAQRVGVH 225 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCS--TTSSSHHHH-------HHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccC--CCCCchhhH-------HHHHHHHHHHHHHhcCCCceEEE
Confidence 43 5799999999973 22333322333333 579997643 34677777777777643334 4
Q ss_pred EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 377 LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 377 lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
||..|.+ +.+.+.++ +....+|++...++||...-
T Consensus 226 ls~~~~~--~g~~~~~~------~~~~~~la~~l~~~Gvd~i~ 260 (362)
T 4ab4_A 226 LAPRADA--HDMGDADR------AETFTYVARELGKRGIAFIC 260 (362)
T ss_dssp ECTTCCS--SSCCCTTH------HHHHHHHHHHHHHTTCSEEE
T ss_pred eeccccc--cccCCCCc------HHHHHHHHHHHHHhCCCEEE
Confidence 4544321 11112222 22344667777788998653
No 320
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=24.70 E-value=1.5e+02 Score=31.92 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=42.1
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHhCCcEee-ecCCCCChH---HHHHHHHhcCC-CCcccchhhhHHHHhcCCCC
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMWGADTVM-DLSTGRHIH---ETREWILRNSA-VPVGTVPIYQALEKVDGIAE 295 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVM-DLSTGgdi~---~~R~~Il~nsp-vPVGTVPIYqAl~k~~g~~~ 295 (667)
.-|.+.+|++.+ .++.+.+.+++|+|.|. |.+.| +.. ++=+||-+..| +||.- |.+
T Consensus 245 l~V~aavg~~~d------~~era~aLveaGvd~I~Id~a~g-~~~~v~~~i~~i~~~~~~~~vi~-----------g~v- 305 (511)
T 3usb_A 245 LLVGAAVGVTAD------AMTRIDALVKASVDAIVLDTAHG-HSQGVIDKVKEVRAKYPSLNIIA-----------GNV- 305 (511)
T ss_dssp BCCEEEECSSTT------HHHHHHHHHHTTCSEEEEECSCT-TSHHHHHHHHHHHHHCTTSEEEE-----------EEE-
T ss_pred eeeeeeeeeccc------hHHHHHHHHhhccceEEeccccc-chhhhhhHHHHHHHhCCCceEEe-----------eee-
Confidence 445566666643 36678888999999875 55544 222 33344444443 44431 111
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
.|.+.. +.-.+.|+|++.+
T Consensus 306 -~t~e~a----~~~~~aGad~i~v 324 (511)
T 3usb_A 306 -ATAEAT----KALIEAGANVVKV 324 (511)
T ss_dssp -CSHHHH----HHHHHHTCSEEEE
T ss_pred -ccHHHH----HHHHHhCCCEEEE
Confidence 144443 3344679999985
No 321
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=24.54 E-value=64 Score=32.19 Aligned_cols=20 Identities=30% Similarity=0.340 Sum_probs=15.5
Q ss_pred HHHHHHHhcCCCEEEEeccc
Q 005965 304 DTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 304 d~ieeQAeqGVDfmTIHaGv 323 (667)
+.+..-.+.|||+++||.+.
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~ 163 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRT 163 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHhCCCEEEEcCCC
Confidence 55556667899999999763
No 322
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=24.41 E-value=1.8e+02 Score=29.69 Aligned_cols=63 Identities=19% Similarity=0.173 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV 375 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV 375 (667)
.++.+++.+.+..-.+.||||+.||.|-+.. .++ .. .|-| +++.+-+|.+..++
T Consensus 225 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~------~~~----~~---------------~~~~-~~~~~~~ik~~~~i 278 (340)
T 3gr7_A 225 GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP------ARM----NV---------------YPGY-QVPFAELIRREADI 278 (340)
T ss_dssp SCCGGGHHHHHHHHHHTTCCEEEEECCCSSC------CCC----CC---------------CTTT-THHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccC------CCC----CC---------------Cccc-cHHHHHHHHHHcCC
Confidence 3577888888888889999999999875332 000 00 0111 34556677778899
Q ss_pred eEeccCCCC
Q 005965 376 ALSIGDGLR 384 (667)
Q Consensus 376 tlSLGDGLR 384 (667)
.+-.+-|++
T Consensus 279 PVi~~GgI~ 287 (340)
T 3gr7_A 279 PTGAVGLIT 287 (340)
T ss_dssp CEEEESSCC
T ss_pred cEEeeCCCC
Confidence 888776665
No 323
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=24.22 E-value=15 Score=36.85 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=0.0
Q ss_pred HHHHHHHHHhC-------CcEeeecCCC------------CChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHH
Q 005965 240 VYKVQWATMWG-------ADTVMDLSTG------------RHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWE 300 (667)
Q Consensus 240 veKl~~A~~~G-------ADtVMDLSTG------------gdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e 300 (667)
.+-+.|+.+.| +++++ +.|. .++.++++.+-++----+---|-|=-+.-.+..+.+-+-+
T Consensus 64 ~~~l~~~~~~gi~~~ri~s~~f~-~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py~iNL~S~~~e~re~Si~ 142 (301)
T 2j6v_A 64 ERILRFNADHGFALFRIGQHLIP-FASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQYVNPGSPDPEVVERSLA 142 (301)
T ss_dssp HHHHHHHHHHTCCEEECCGGGST-TTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCTTCCTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccCccc-ccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCchhhcCCCCCHHHHHHHHH
Q ss_pred HHHHHHHHHHhcCCC--EEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEe
Q 005965 301 VFRDTLIEQAEQGVD--YFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALS 378 (667)
Q Consensus 301 ~~~d~ieeQAeqGVD--fmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlS 378 (667)
.|.+.++.-.+-|++ ++.+|.|-....-+..-.|+.-.+.+ ......++.--+-.. ...|++|++||++.+|-+-
T Consensus 143 ~l~~~l~~a~~lG~~~a~~v~HpG~~~~~~e~~~~r~~e~l~~-~~~a~~~l~lEn~~~--~~t~~el~~l~~~~~vgvc 219 (301)
T 2j6v_A 143 ELRYSARLLSLLGAEDGVLVLHLGGAYGEKGKALRRFVENLRG-EEEVLRYLALENDER--LWNVEEVLKAAEALGVPVV 219 (301)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEECCCCTTCHHHHHHHHHHHHTT-CHHHHHHEEEECCSS--SCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCcCCCCHHHHHHHHHHHHhH-HHhhcceEEEEeCCC--CCCHHHHHHHHhcCCCEEE
Q ss_pred c
Q 005965 379 I 379 (667)
Q Consensus 379 L 379 (667)
|
T Consensus 220 l 220 (301)
T 2j6v_A 220 V 220 (301)
T ss_dssp E
T ss_pred E
No 324
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.18 E-value=2.6e+02 Score=28.34 Aligned_cols=28 Identities=25% Similarity=0.140 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.++.+++...+.+-.+.||||+.+|.|-
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 262 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGG 262 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4678888888888888999999999863
No 325
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=24.03 E-value=2.9e+02 Score=27.96 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEecc
Q 005965 301 VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIG 380 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLG 380 (667)
.+.+.|+.-++.|.|.+-||.. +..+... . +. . +....+++.+.+++|++.++.-
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~---~~~~~~~-----------~-~~-~---------~~~~~~~l~~~l~~~GL~i~~~ 88 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDN---DLIPFDA-----------T-EA-E---------REKILGDFNQALKDTGLKVPMV 88 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHH---HHSCTTC-----------C-HH-H---------HHHHHHHHHHHHHHHCCBCCEE
T ss_pred CHHHHHHHHHHcCCCEEEecCC---ccCcccC-----------C-ch-h---------hHHHHHHHHHHHHHcCCeEEEE
Confidence 3677788888899999999862 1111100 0 00 0 0356789999999999988643
Q ss_pred CC-C------CCCCccCCCcHHHH-HHHHHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 381 DG-L------RPGSIYDANDTAQF-AELLTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 381 DG-L------RPG~iaDA~D~AQ~-~EL~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
.. + +.|.+.+ .|+... .-+..+-+..+.|.+.|+.+++=-||..
T Consensus 89 ~~~~f~~p~~~~g~l~~-~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~ 140 (394)
T 1xla_A 89 TTNLFSHPVFKDGGFTS-NDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGRE 140 (394)
T ss_dssp ECCCSSSGGGTTCSTTC-SSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTC
T ss_pred ecCccCCccccCCccCC-CCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 22 1 3455554 344333 3345677889999999999998767643
No 326
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=23.81 E-value=89 Score=31.10 Aligned_cols=73 Identities=12% Similarity=-0.009 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCcEeee-cCCCCChH------HHHHHHHhcCCCCcccchhhhHHHHhcCCC-------------CCCCHH
Q 005965 241 YKVQWATMWGADTVMD-LSTGRHIH------ETREWILRNSAVPVGTVPIYQALEKVDGIA-------------ENLSWE 300 (667)
Q Consensus 241 eKl~~A~~~GADtVMD-LSTGgdi~------~~R~~Il~nspvPVGTVPIYqAl~k~~g~~-------------~~lt~e 300 (667)
+-++.|++.|+|.||= .++. ++| ..+++.|+.. ..+-+.+.+.|-.+ ..-++|
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s-~~~~~~~~~~s~ee~l~~~------~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~ 159 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAAS-EAFSQRNINCSIKDSLERF------VPVLEAARQHQVRVRGYISCVLGCPYDGDVDPR 159 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESC-HHHHHHHHSSCHHHHHHHH------HHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHH
T ss_pred HHHHHHHhCCcCEEEEEEecC-HHHHHHHhCCCHHHHHHHH------HHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHH
Confidence 5677889999999993 4443 333 2233333321 11111122222111 136789
Q ss_pred HHHHHHHHHHhcCCCEEEEe
Q 005965 301 VFRDTLIEQAEQGVDYFTIH 320 (667)
Q Consensus 301 ~~~d~ieeQAeqGVDfmTIH 320 (667)
.+.+.+++-.+.|+|.+.|-
T Consensus 160 ~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 160 QVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 99999999999999988775
No 327
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=23.73 E-value=3.7e+02 Score=27.73 Aligned_cols=122 Identities=13% Similarity=0.136 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccccc--cccccCccc---------CccccccHHHHHHHHHcC---CcCchh-hh
Q 005965 298 SWEVFRDTLIEQAEQGVDYFTIHAGVLLRY--IPLTAKRMT---------GIVSRGGSIHAKWCLAYH---KENFAY-EH 362 (667)
Q Consensus 298 t~e~~~d~ieeQAeqGVDfmTIHaGv~~~~--l~~~~~Rvt---------gIVSRGGSi~a~Wml~h~---~ENpLY-e~ 362 (667)
+.|.+.+.+++..++|...+-++.|...+. +......+- +=-|.--.+..+++...+ =|=|+- .+
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~~~~~~l~vDaN~~~~~~~A~~~~~l~~~~i~~iEeP~~~~d 228 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLRYPDLAIAADANGSYRPEDAPVLRQLDAYDLQFIEQPLPEDD 228 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHGGGGCCSCEECCSCTTC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHCCCCeEEEECCCCCChHHHHHHHHHhhCCCcEEECCCCccc
Confidence 589999999999999999999998753211 110000110 111334444444444332 144553 46
Q ss_pred HHHHHHHHhHhceeEeccCCCCCCCccC--------CC-----cHHHHHHHHHHHHHHHHHHhcCCeEEeeC
Q 005965 363 WDEILDICNQYDVALSIGDGLRPGSIYD--------AN-----DTAQFAELLTQGELTRRAWDKDVQVMNEG 421 (667)
Q Consensus 363 FD~ileI~k~YDVtlSLGDGLRPG~iaD--------A~-----D~AQ~~EL~~LGEL~krA~e~gVQVMIEG 421 (667)
++.+-++.++.++-|.+|..+.- ..| +- |..++.-|-..-+++..|.++|++||+-+
T Consensus 229 ~~~~~~l~~~~~ipIa~dE~~~~--~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 298 (388)
T 3qld_A 229 WFDLAKLQASLRTPVCLDESVRS--VRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG 298 (388)
T ss_dssp HHHHHHHHHHCSSCEEESTTCCS--HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHhCCCCEEeCCCCCC--HHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC
Confidence 89999999999999999987641 111 11 12222223333467788999999998643
No 328
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=23.60 E-value=4e+02 Score=28.05 Aligned_cols=89 Identities=17% Similarity=0.102 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHHHHhCCcEeeecC------------CC-CChHHHHHHHHhcCCCCccc--------------chhhh--
Q 005965 235 SIEEEVYKVQWATMWGADTVMDLS------------TG-RHIHETREWILRNSAVPVGT--------------VPIYQ-- 285 (667)
Q Consensus 235 ~ieeEveKl~~A~~~GADtVMDLS------------TG-gdi~~~R~~Il~nspvPVGT--------------VPIYq-- 285 (667)
|++.=++-++.+.++|||.|--=+ .| ..+..++ .+.+...+|+-| ||+||
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~-~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkIg 232 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILK-RVSDEYGLGVISEIVTPADIEVALDYVDVIQIG 232 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHH-HHHHHHTCEEEEECCSGGGHHHHTTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHH-HHHHHcCCEEEEecCCHHHHHHHHhhCCEEEEC
Confidence 666667778888899999884211 01 1122222 334556677766 44444
Q ss_pred -----------HHHHhcC-----CCCCCCHHHHHHHHHHHHhcCC-CEEEEecccc
Q 005965 286 -----------ALEKVDG-----IAENLSWEVFRDTLIEQAEQGV-DYFTIHAGVL 324 (667)
Q Consensus 286 -----------Al~k~~g-----~~~~lt~e~~~d~ieeQAeqGV-DfmTIHaGv~ 324 (667)
++.+.+. .-...|.+++...++.=.+.|- +++-.|||++
T Consensus 233 s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s 288 (385)
T 3nvt_A 233 ARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIR 288 (385)
T ss_dssp GGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred cccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 2222221 1124799999999999989997 7999999975
No 329
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=23.54 E-value=1.4e+02 Score=27.32 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEec
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSI 379 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSL 379 (667)
++..+.++.-.+.|+|++.+|.- ... + .+ ....++.|-+|++++++-+-.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~-~~~----------------~------------~~-~~~~~~~i~~i~~~~~ipvi~ 82 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDI-TAA----------------P------------EG-RATFIDSVKRVAEAVSIPVLV 82 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEEC-CCC----------------T------------TT-HHHHHHHHHHHHHHCSSCEEE
T ss_pred ccHHHHHHHHHHcCCCEEEEEeC-Ccc----------------c------------cC-CcccHHHHHHHHHhcCCCEEE
Confidence 35667777777899999998731 110 0 01 123567788899999999998
Q ss_pred cCCCC
Q 005965 380 GDGLR 384 (667)
Q Consensus 380 GDGLR 384 (667)
++|++
T Consensus 83 ~g~i~ 87 (253)
T 1h5y_A 83 GGGVR 87 (253)
T ss_dssp ESSCC
T ss_pred ECCCC
Confidence 88876
No 330
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=23.52 E-value=82 Score=34.03 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhcCCeEEee
Q 005965 402 TQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 402 ~LGEL~krA~e~gVQVMIE 420 (667)
.|.+|.++|++.|..+|+|
T Consensus 145 ~l~~l~~~a~~lgm~~LvE 163 (452)
T 1pii_A 145 QYRQLAAVAHSLEMGVLTE 163 (452)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEE
Confidence 5778899999999999999
No 331
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=23.50 E-value=5.9e+02 Score=25.81 Aligned_cols=61 Identities=13% Similarity=0.159 Sum_probs=38.1
Q ss_pred hHHHHHHHHhHhceeEeccCCCCC----------CCccCC--CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCC
Q 005965 362 HWDEILDICNQYDVALSIGDGLRP----------GSIYDA--NDTAQFAELLTQGELTRRAWDKDVQVMNEGPG 423 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSLGDGLRP----------G~iaDA--~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPG 423 (667)
+++.+-++.++.++-+.+|+.+.- |+ +|. -|..|+.-|-..-++++.|.++|++||+-+.+
T Consensus 238 ~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~-~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 238 DNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQA-CGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTC-CSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC-CCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 577777777788888888776642 11 111 12333333444456778889999999984443
No 332
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=23.46 E-value=3.5e+02 Score=23.11 Aligned_cols=121 Identities=12% Similarity=0.116 Sum_probs=67.1
Q ss_pred CCChHHHHHHHHHHHHhCCcEeeecCCCCC-hHHHHHHHHh--cCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHH
Q 005965 233 ASSIEEEVYKVQWATMWGADTVMDLSTGRH-IHETREWILR--NSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQ 309 (667)
Q Consensus 233 ~~~ieeEveKl~~A~~~GADtVMDLSTGgd-i~~~R~~Il~--nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQ 309 (667)
..+++..++.+ .++|..+|.+|..... -......-++ ..|++-+.+|--+.+ +.|++.|++.
T Consensus 33 ~~t~~~~~~~l---~~~gi~~Iv~l~~~~~~~~~~~~~~i~~~~~p~~d~~~p~~~~~------------~~~~~~i~~~ 97 (167)
T 3s4o_A 33 PSNLPTYIKEL---QHRGVRHLVRVCGPTYDATLVKSRGIDVHSWPFDDGAPPTRAVL------------DSWLKLLDTE 97 (167)
T ss_dssp GGGHHHHHHHH---HTTTEEEEEECSCCCSCTHHHHTTTCEEEECCCCTTCCCCHHHH------------HHHHHHHHHH
T ss_pred hhhHHHHHHHH---HHCCCCEEEECCCCCCCHHHHHHCCCeEEEeccCCCCCCCHHHH------------HHHHHHHHHH
Confidence 34455555544 3689999999987621 1111111111 223333333332211 3334444333
Q ss_pred Hhc-------CCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCC
Q 005965 310 AEQ-------GVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDG 382 (667)
Q Consensus 310 Aeq-------GVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDG 382 (667)
.+. .=.=+-|||. +| +||-|.+++.|++....- .++++++.+++.
T Consensus 98 ~~~~~~~~~~~~~~vlVHC~---------aG-----~~RTg~~~a~~L~~~~~~-----~~~~a~~~vr~~--------- 149 (167)
T 3s4o_A 98 LARQQEDPSVPPPTIGVHCV---------AG-----LGRAPILVALALVEYGNV-----SALDAIALIREK--------- 149 (167)
T ss_dssp HHHHHHCTTCCCCEEEEECS---------SS-----SSHHHHHHHHHHHHTTCC-----CHHHHHHHHHHH---------
T ss_pred HHHHhhccccCCCcEEEECC---------CC-----CCHHHHHHHHHHHHhCCC-----CHHHHHHHHHHH---------
Confidence 221 1125679994 22 689999999999875332 467788888764
Q ss_pred CCCCCccCCCcHHHHHHHH
Q 005965 383 LRPGSIYDANDTAQFAELL 401 (667)
Q Consensus 383 LRPG~iaDA~D~AQ~~EL~ 401 (667)
|||++. ..|+.=|.
T Consensus 150 -R~~~v~----~~Q~~fl~ 163 (167)
T 3s4o_A 150 -RKGAIN----QTQMHWIT 163 (167)
T ss_dssp -STTCSC----HHHHHHHH
T ss_pred -CCCCCC----HHHHHHHH
Confidence 999983 56766554
No 333
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=23.45 E-value=1.1e+02 Score=30.85 Aligned_cols=33 Identities=9% Similarity=0.225 Sum_probs=23.9
Q ss_pred cCchhhhH-H-HHHHHHhHhceeE----eccCCCCCCCc
Q 005965 356 ENFAYEHW-D-EILDICNQYDVAL----SIGDGLRPGSI 388 (667)
Q Consensus 356 ENpLYe~F-D-~ileI~k~YDVtl----SLGDGLRPG~i 388 (667)
=||+.... + +|++.|++++|.+ +||-|+-.|..
T Consensus 217 ~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~ 255 (367)
T 3lut_A 217 YHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKY 255 (367)
T ss_dssp CBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTT
T ss_pred ccceecchhHhHHHHHHHHcCCeEEEecccccccccCCc
Confidence 46665543 4 8999999999998 57877755543
No 334
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=23.26 E-value=1.4e+02 Score=29.37 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=72.6
Q ss_pred cccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhc
Q 005965 334 RMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDK 413 (667)
Q Consensus 334 RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~ 413 (667)
++++|++|--.-..++...++-. ..|+.|+++|+= .+.|+++--- |-.. -.++++.|-++
T Consensus 30 ~l~av~d~~~~~a~~~a~~~~~~-~~~~~~~~ll~~-~~vD~V~i~t----p~~~--------------H~~~~~~al~~ 89 (334)
T 3ohs_X 30 QVVAVAARDLSRAKEFAQKHDIP-KAYGSYEELAKD-PNVEVAYVGT----QHPQ--------------HKAAVMLCLAA 89 (334)
T ss_dssp EEEEEECSSHHHHHHHHHHHTCS-CEESSHHHHHHC-TTCCEEEECC----CGGG--------------HHHHHHHHHHT
T ss_pred EEEEEEcCCHHHHHHHHHHcCCC-cccCCHHHHhcC-CCCCEEEECC----CcHH--------------HHHHHHHHHhc
Confidence 68899998877767776666543 358999988762 3567765321 1111 14677889999
Q ss_pred CCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhH
Q 005965 414 DVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAI 467 (667)
Q Consensus 414 gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAI 467 (667)
|.-|++|-|-=.-+.+.++=+++.++ ++..+++ | ...=-.|.|..+-..|
T Consensus 90 GkhVl~EKP~a~~~~e~~~l~~~a~~--~~~~~~v-~-~~~r~~p~~~~~k~~i 139 (334)
T 3ohs_X 90 GKAVLCEKPMGVNAAEVREMVTEARS--RGLFLME-A-IWTRFFPASEALRSVL 139 (334)
T ss_dssp TCEEEEESSSSSSHHHHHHHHHHHHH--TTCCEEE-E-CGGGGSHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH--hCCEEEE-E-EhHhcCHHHHHHHHHH
Confidence 99999999988888888887777776 4566654 2 1222335555555544
No 335
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=23.05 E-value=3.9e+02 Score=27.54 Aligned_cols=55 Identities=15% Similarity=0.064 Sum_probs=29.7
Q ss_pred hhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 359 AYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 359 LYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
..+.++++++|+++.++.+.+.---- .....+.-....-+++++|++.|+.|..|
T Consensus 226 ~~~a~~e~i~la~~~g~~v~i~H~s~-------~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e 280 (480)
T 3gip_A 226 VEAAVEEVLAIGRGTGCATVVSHHKC-------MMPQNWGRSRATLANIDRAREQGVEVALD 280 (480)
T ss_dssp HHHHHHHHHHHHHHHCCEEEETTCCC-------CSGGGTTTHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEec-------cCccchhhHHHHHHHHHHHHHcCCceEEE
Confidence 36777778888887776665432110 01111111112235667777778777755
No 336
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=23.02 E-value=5.7e+02 Score=26.65 Aligned_cols=113 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred chhhhHHHHhcCC-----------CCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHH
Q 005965 281 VPIYQALEKVDGI-----------AENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKW 349 (667)
Q Consensus 281 VPIYqAl~k~~g~-----------~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~W 349 (667)
+|+||-| ||. ...-+.|.+.+..++-.++|.+.+=||.|.... .||
T Consensus 154 ~Pv~~LL---GG~~r~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~--------------dg~------ 210 (412)
T 3stp_A 154 KPVFKLL---GGRTKDRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK--------------DGM------ 210 (412)
T ss_dssp CBHHHHH---TCCSSSSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG--------------GHH------
T ss_pred CCHHHhc---CCCCCceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc--------------ccc------
Q ss_pred HHHcCCcCchhhhHHHHHHHHhHh--ceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCC
Q 005965 350 CLAYHKENFAYEHWDEILDICNQY--DVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPM 427 (667)
Q Consensus 350 ml~h~~ENpLYe~FD~ileI~k~Y--DVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl 427 (667)
|.+=...+.|-.|-+.. |+.|.+ |+|-.-...|.+ ++.++..+.|+. +||-| +|-
T Consensus 211 -------~~~~~die~v~avReavG~d~~L~v----------DaN~~~~~~~Ai---~~~~~Le~~~i~-~iEeP--~~~ 267 (412)
T 3stp_A 211 -------PGMRENLKRVEAVREVIGYDNDLML----------ECYMGWNLDYAK---RMLPKLAPYEPR-WLEEP--VIA 267 (412)
T ss_dssp -------HHHHHHHHHHHHHHHHHCSSSEEEE----------ECTTCSCHHHHH---HHHHHHGGGCCS-EEECC--SCT
T ss_pred -------chHHHHHHHHHHHHHHcCCCCeEEE----------ECCCCCCHHHHH---HHHHHHHhcCCC-EEECC--CCc
Q ss_pred CchHHHHHHHHH
Q 005965 428 HKIPENMQKQLE 439 (667)
Q Consensus 428 ~~I~~Nv~lqk~ 439 (667)
++++..-++.++
T Consensus 268 ~d~~~~~~l~~~ 279 (412)
T 3stp_A 268 DDVAGYAELNAM 279 (412)
T ss_dssp TCHHHHHHHHHT
T ss_pred ccHHHHHHHHhC
No 337
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=22.80 E-value=80 Score=29.49 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=35.1
Q ss_pred hhHHHHHHHHhHhcee---EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCC
Q 005965 361 EHWDEILDICNQYDVA---LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGP 422 (667)
Q Consensus 361 e~FD~ileI~k~YDVt---lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGP 422 (667)
+.|.+.+++|++.++. +..|+- .+. + .|.+|++.|.++||.+.||--
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~-~~~------~--------~l~~l~~~a~~~Gv~l~lEn~ 133 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLL-PEQ------P--------DLAALGRRLARHGLQLLVEND 133 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECC-CSS------C--------CHHHHHHHHTTSSCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-CcH------H--------HHHHHHHHHHhcCCEEEEecC
Confidence 8899999999998753 444431 111 1 677888999999999999954
No 338
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=22.76 E-value=3.8e+02 Score=23.33 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=52.5
Q ss_pred HHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCC--CHHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 247 TMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENL--SWEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l--t~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.++|..+|.||....+- . ...+-.=.+|+.+ ....++ ..+..++.|++..++|-- +-|||.-
T Consensus 30 ~~~gI~~Vi~l~~~~~~------~--~~~i~~~~ipi~D------~~~~~~~~~~~~~~~~i~~~~~~~~~-VlVHC~a- 93 (160)
T 1yz4_A 30 GRNKITHIISIHESPQP------L--LQDITYLRIPVAD------TPEVPIKKHFKECINFIHCCRLNGGN-CLVHSFA- 93 (160)
T ss_dssp HHTTCCEEEEECSSCCC------C--CTTCEEEEECCCS------CTTSCGGGGHHHHHHHHHHHHHTTCC-EEEEETT-
T ss_pred HHCCCeEEEEccCCCCC------c--cCCCeEEEEECCC------CCCccHHHHHHHHHHHHHHHHHcCCe-EEEECCC-
Confidence 46899999999875321 0 0111111233321 111222 124555666665555533 5689942
Q ss_pred ccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH
Q 005965 325 LRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ 372 (667)
Q Consensus 325 ~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~ 372 (667)
|+ ||-|++.++|++....- .+++.++.+++
T Consensus 94 ------------G~-~RSg~~~~aylm~~~~~-----~~~~a~~~v~~ 123 (160)
T 1yz4_A 94 ------------GI-SRSTTIVTAYVMTVTGL-----GWRDVLEAIKA 123 (160)
T ss_dssp ------------SS-SHHHHHHHHHHHHHHCC-----CHHHHHHHHHH
T ss_pred ------------CC-chHHHHHHHHHHHHcCC-----CHHHHHHHHHH
Confidence 44 99999999998765332 46777777775
No 339
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=22.72 E-value=6.4e+02 Score=25.89 Aligned_cols=167 Identities=11% Similarity=0.055 Sum_probs=108.2
Q ss_pred ChHHHHHHH-HHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcC
Q 005965 235 SIEEEVYKV-QWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQG 313 (667)
Q Consensus 235 ~ieeEveKl-~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqG 313 (667)
.-.++++++ ..|.++|+++|+= . -..+...++. |+.++|+|+||= +=..-..+.+.-...+++-.++|
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV-~-P~~V~~a~~~-L~~s~V~V~tVi--------gFP~G~~~~~~Kv~Ea~~Ai~~G 139 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCV-R-PDYVSRAVQY-LQGTQVGVTCVI--------GFHEGTYSTDQKVSEAKRAMQNG 139 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEE-C-GGGHHHHHHH-TTTSSCEEEEEE--------STTTSCSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCcEEEE-C-HHHHHHHHHH-cCCCCCeEEEEe--------CCCCCCCcHHHHHHHHHHHHHcC
Confidence 446778885 7788999999983 3 3467777765 588999999992 11223345566677888899999
Q ss_pred CCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCc
Q 005965 314 VDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDAND 393 (667)
Q Consensus 314 VDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D 393 (667)
.|=+-+|--+. . +..+.+.-+++..-.+.+.|..+-+.+-|=-++ + +|
T Consensus 140 AdEIDmVINig--~-----------------------lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~----L---t~ 187 (288)
T 3oa3_A 140 ASELDMVMNYP--W-----------------------LSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ----L---TA 187 (288)
T ss_dssp CSEEEEECCHH--H-----------------------HHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG----C---CH
T ss_pred CCEEEEEeehh--h-----------------------hcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC----C---CH
Confidence 99988874321 1 122344566777777777777655555554433 1 22
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhc----CCCCccccCc
Q 005965 394 TAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWC----NEAPFYTLGP 451 (667)
Q Consensus 394 ~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC----~~APfYvLGP 451 (667)
.|++ ..++.|-++|.-..=-..|-.+-.-=.+.+++.++.+ ...|+-.-|=
T Consensus 188 ----eei~---~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGG 242 (288)
T 3oa3_A 188 ----DEII---AGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGG 242 (288)
T ss_dssp ----HHHH---HHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESS
T ss_pred ----HHHH---HHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCC
Confidence 2443 3566677888887766666655454455788888876 3355555554
No 340
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=22.53 E-value=1.3e+02 Score=27.94 Aligned_cols=99 Identities=13% Similarity=0.168 Sum_probs=53.0
Q ss_pred HHhCCcEeeecCCCCC-hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC--HHHHHHHHHHHHh-cCCCEEEEecc
Q 005965 247 TMWGADTVMDLSTGRH-IHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS--WEVFRDTLIEQAE-QGVDYFTIHAG 322 (667)
Q Consensus 247 ~~~GADtVMDLSTGgd-i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt--~e~~~d~ieeQAe-qGVDfmTIHaG 322 (667)
.++|..+|.||..... .+. -....+...+-.=.+|+-. ....++. ++..++.|++..+ +|= -+-|||.
T Consensus 68 ~~~gIt~Vinl~~~~~~~~~-~~~~~~~~~i~y~~ipi~D------~p~~dl~~~f~~~~~fI~~~l~~~~~-~VLVHC~ 139 (205)
T 2pq5_A 68 IQLGITHVVNAAAGKFQVDT-GAKFYRGMSLEYYGIEADD------NPFFDLSVYFLPVARYIRAALSVPQG-RVLVHCA 139 (205)
T ss_dssp HHHTCCEEEETBCSTTSCCC-HHHHTTTSSCEEEECBCCC------CTTSCGGGGHHHHHHHHHHHHTSTTC-CEEEECS
T ss_pred HHcCCeEEEEeCCCcccCCc-chhhhccCCceEEeeecCC------CCcchHHHHHHHHHHHHHHHHhcCCC-eEEEECC
Confidence 4689999999987531 110 0111121111111222211 0112222 2344555555543 332 3568994
Q ss_pred ccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhH
Q 005965 323 VLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQ 372 (667)
Q Consensus 323 v~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~ 372 (667)
.| +||-|+++++|++....- .+++.++..++
T Consensus 140 -------------aG-~sRS~tvv~aYLm~~~~~-----s~~~A~~~vr~ 170 (205)
T 2pq5_A 140 -------------MG-VSRSATLVLAFLMIYENM-----TLVEAIQTVQA 170 (205)
T ss_dssp -------------SS-SSHHHHHHHHHHHHHSCC-----CHHHHHHHHTT
T ss_pred -------------CC-CcHHHHHHHHHHHHHcCC-----CHHHHHHHHHH
Confidence 25 599999999999876542 56777777775
No 341
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=22.51 E-value=5.7e+02 Score=26.30 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=83.2
Q ss_pred ceeEeeccccCCCCCChHHHHHHHHHHHHh---CCcEeeecCCCC-ChHHHHHHH--HhcCCCCcc-cchhhhHHHHhcC
Q 005965 220 LVKVNANIGNSAVASSIEEEVYKVQWATMW---GADTVMDLSTGR-HIHETREWI--LRNSAVPVG-TVPIYQALEKVDG 292 (667)
Q Consensus 220 ~tKVNANIGtS~~~~~ieeEveKl~~A~~~---GADtVMDLSTGg-di~~~R~~I--l~nspvPVG-TVPIYqAl~k~~g 292 (667)
++.+++++|.-. ..+.++-+++++.+++. |-.+| -+-.|. ++++-.+.| +|.. +| .++|. ..++
T Consensus 157 ~v~~y~s~g~~~-~~~~e~~~~~a~~~~~~~~~G~~~i-KlKvG~~~~~~d~~~v~avR~a---~G~~~~l~---vDaN- 227 (390)
T 3ugv_A 157 SVKAYNSNGLWL-KSPAEVAAEAVELKAEGQGTGFKGL-KLRMGRDDPAVDIETAEAVWDA---VGRDTALM---VDFN- 227 (390)
T ss_dssp EEEEEECSCCCS-SCHHHHHHHHHHHHHTTCTTCCSEE-EEECCCSSHHHHHHHHHHHHHH---HCTTSEEE---EECT-
T ss_pred ceEEEEeccccc-CCCHHHHHHHHHHHHHhhhCCCcEE-EEecCCCCHHHHHHHHHHHHHH---hCCCCEEE---EECC-
Confidence 455666665421 24667777888888888 87665 455554 333322211 1110 00 11110 0112
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchh-hhHHHHHHHHh
Q 005965 293 IAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY-EHWDEILDICN 371 (667)
Q Consensus 293 ~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLY-e~FD~ileI~k 371 (667)
...|.++.++.+.+-.+.|++|+- -|+- .+++.+-++.+
T Consensus 228 --~~~~~~~A~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~~ 267 (390)
T 3ugv_A 228 --QGLDMAEAMHRTRQIDDLGLEWIE--------------------------------------EPVVYDNFDGYAQLRH 267 (390)
T ss_dssp --TCCCHHHHHHHHHHHTTSCCSEEE--------------------------------------CCSCTTCHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHhhCCCEEE--------------------------------------CCCCcccHHHHHHHHH
Confidence 235667766666666666787772 2332 36778888888
Q ss_pred HhceeEeccCCCCCC-C----c-cCC-----CcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 372 QYDVALSIGDGLRPG-S----I-YDA-----NDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 372 ~YDVtlSLGDGLRPG-~----i-aDA-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
+.++-+.+|..+.-= . + ..+ -|...+.-|...-+++..|.++|++||+=
T Consensus 268 ~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h 327 (390)
T 3ugv_A 268 DLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTH 327 (390)
T ss_dssp HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCB
T ss_pred hcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 888888888765310 0 0 011 12223333444447788899999999863
No 342
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=22.50 E-value=93 Score=32.43 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccccc---cccCcccCccccccHHHHHHHHHcCCcCchhh-hHHHHHHHHhHhc
Q 005965 299 WEVFRDTLIEQAEQGVDYFTIHAGVLLRYIP---LTAKRMTGIVSRGGSIHAKWCLAYHKENFAYE-HWDEILDICNQYD 374 (667)
Q Consensus 299 ~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~---~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe-~FD~ileI~k~YD 374 (667)
.+++..++..-++-|||-+-.|.|+..+..- +..+=+.|=.+|||-=-+.+ .+++ .+-. .-++.+++= -|
T Consensus 70 ~~~l~~~~~~~~~~Gvdavl~~~gi~~d~~Li~~L~~~tv~gs~~~ggl~g~~~--~~d~--~~~~~sVe~AvrlG--AD 143 (307)
T 3fok_A 70 YELLERMAIALSRPGVDGVLGTPDIIDDLAALGLLDDKIVVGSMNRGGLRGASF--EMDD--RYTGYNVSSMVDRG--VD 143 (307)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECHHHHHHHHHTTCCTTCEEEEECCCCSCTTCTT--TTSC--CCCSCCHHHHHHHT--CC
T ss_pred HHHHHHHHHHHhccCCCEEEECcchhhcccceEEecCcccccccCccccccCCC--Cccc--cccccCHHHHHHCC--CC
Confidence 3667777777889999999999999744321 22233455567875311111 1221 1222 444444330 11
Q ss_pred eeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEee
Q 005965 375 VALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE 420 (667)
Q Consensus 375 VtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIE 420 (667)
.+|+.=-+.|| |+.+.+-|..++++++.|.++|+-+|+|
T Consensus 144 -aV~~l~~i~~G------s~~e~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 144 -FAKTLVRINLS------DAGTAPTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp -EEEEEEEECTT------CTTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred -EEEEEEEECCC------ChhHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 11110011222 3445778889999999999999999998
No 343
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=22.30 E-value=41 Score=33.50 Aligned_cols=29 Identities=21% Similarity=0.510 Sum_probs=22.0
Q ss_pred CchhhhHHHHHHHHhHhceeE----eccCCCCCC
Q 005965 357 NFAYEHWDEILDICNQYDVAL----SIGDGLRPG 386 (667)
Q Consensus 357 NpLYe~FD~ileI~k~YDVtl----SLGDGLRPG 386 (667)
||++.+ +++++.|++++|.+ +||-|+.+|
T Consensus 194 ~~~~~~-~~l~~~~~~~gI~v~a~spL~~G~l~~ 226 (323)
T 1afs_A 194 HLYLNQ-SKMLDYCKSKDIILVSYCTLGSSRDKT 226 (323)
T ss_dssp BTTBCC-HHHHHHHHHHTCEEEEESTTSCCCCTT
T ss_pred ccccch-HHHHHHHHHcCCEEEEecCccCCcccc
Confidence 565544 68999999999987 477776654
No 344
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=22.14 E-value=1.5e+02 Score=30.12 Aligned_cols=130 Identities=12% Similarity=0.122 Sum_probs=78.5
Q ss_pred CCCCChHHHHHHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHH
Q 005965 231 AVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQA 310 (667)
Q Consensus 231 ~~~~~ieeEveKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQA 310 (667)
+...+.+.|+++|+.=+++|||-++ |=|.|++ |.|++.+++-.
T Consensus 157 p~a~~~~~d~~~Lk~KvdAGAdf~i------------------------TQ~ffD~-------------~~~~~f~~~~r 199 (304)
T 3fst_A 157 PEAKSAQADLLNLKRKVDAGANRAI------------------------TQFFFDV-------------ESYLRFRDRCV 199 (304)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCCEEE------------------------ECCCSCH-------------HHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEE------------------------eCccCCH-------------HHHHHHHHHHH
Confidence 4457889999999999999999977 5566654 66667776666
Q ss_pred hcCCCEEEEeccccccccccccCcccCccccccH-HHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCcc
Q 005965 311 EQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGS-IHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIY 389 (667)
Q Consensus 311 eqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGS-i~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~ia 389 (667)
+.|++ +-|.+|| ++|.|..-. .|++|| +-+=| ++|++.+.+++
T Consensus 200 ~~Gi~-vPIi~GI------------mPi~s~~~~~~~~~~~---Gv~iP-----~~l~~~l~~~~--------------- 243 (304)
T 3fst_A 200 SAGID-VEIIPGI------------LPVSNFKQAKKLADMT---NVRIP-----AWMAQMFDGLD--------------- 243 (304)
T ss_dssp HTTCC-SCEECEE------------CCCSCHHHHHHHHHHH---TCCCC-----HHHHHHHTTCT---------------
T ss_pred hcCCC-CcEEEEe------------cccCCHHHHHHHHHcC---CCcCC-----HHHHHHHHhcC---------------
Confidence 78876 4566664 344433221 233444 33333 35555555542
Q ss_pred CCCcHH-HHHHHHHHHHHHHHHHhcCCeEEeeCCCCC-CCCchHHHHHHHHH
Q 005965 390 DANDTA-QFAELLTQGELTRRAWDKDVQVMNEGPGHI-PMHKIPENMQKQLE 439 (667)
Q Consensus 390 DA~D~A-Q~~EL~~LGEL~krA~e~gVQVMIEGPGHV-Pl~~I~~Nv~lqk~ 439 (667)
| ++++ +-.-+....|++++..+.||+-. |+ .||+-+...++-+.
T Consensus 244 d-d~~~~~~~Gi~~a~e~~~~L~~~gv~Gi-----H~yt~n~~~~~~~I~~~ 289 (304)
T 3fst_A 244 D-DAETRKLVGANIAMDMVKILSREGVKDF-----HFYTLNRAEMSYAICHT 289 (304)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHTTCCEE-----EEECTTCCHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHCCCCEE-----EECCCCCHHHHHHHHHH
Confidence 1 1232 33445666788888887776532 32 57766655554443
No 345
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=22.12 E-value=1.1e+02 Score=30.43 Aligned_cols=26 Identities=23% Similarity=0.563 Sum_probs=20.4
Q ss_pred CchhhhHHHHHHHHhHhceeEe----ccCCC
Q 005965 357 NFAYEHWDEILDICNQYDVALS----IGDGL 383 (667)
Q Consensus 357 NpLYe~FD~ileI~k~YDVtlS----LGDGL 383 (667)
||++.+ +++++.|++++|.+- ||-|+
T Consensus 195 ~~~~~~-~~l~~~~~~~gi~v~a~spL~~g~ 224 (324)
T 3ln3_A 195 HLYLNQ-RXLLDYCESXDIVLVAYGALGTQR 224 (324)
T ss_dssp BTTBCC-HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred Ccccch-HHHHHHHHHcCCEEEEecCCCCCC
Confidence 565544 789999999999984 77775
No 346
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=22.01 E-value=3e+02 Score=26.25 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=72.6
Q ss_pred CHHHHHHHHhcceEEEecCCCCCCCCceEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHh--CCc-EeeecCCCCC
Q 005965 186 DPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMW--GAD-TVMDLSTGRH 262 (667)
Q Consensus 186 ~pE~vR~~VA~Gr~VIPaN~nh~~~~p~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~--GAD-tVMDLSTGgd 262 (667)
.|+.+|+.+++|.-|--.-.+|+.+. + -....+.+|+++.+.+++. |.. ...--.-+|.
T Consensus 84 ~p~~~~~~~~~GheIg~Ht~~H~~l~--------------~----ls~~~~~~ei~~~~~~l~~~~G~~~~~~fr~P~G~ 145 (240)
T 1ny1_A 84 QPQLIKRMSDEGHIIGNHSFHHPDLT--------------T----KTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGV 145 (240)
T ss_dssp CHHHHHHHHHTTCEEEECCSSCCCGG--------------G----SCHHHHHHHHHHHHHHHHHHHSCCCCCEECCGGGE
T ss_pred CHHHHHHHHHCcCChhcCCccccccc--------------c----CCHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCC
Confidence 58999999999998888888886431 0 1123567788887777653 543 2221222222
Q ss_pred hHHHHHHHHhcCCCCcccchhhhHHHHhcCCCC--------CCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCc
Q 005965 263 IHETREWILRNSAVPVGTVPIYQALEKVDGIAE--------NLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKR 334 (667)
Q Consensus 263 i~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~--------~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~R 334 (667)
.+..=..+++.....+ +..++. .-+++.+.+.+.+++..| +.+.+|.+-
T Consensus 146 ~~~~~~~~l~~~G~~~-----------v~w~~d~~Dw~~~~~~~~~~~~~~v~~~~~~g-~Iil~Hd~~----------- 202 (240)
T 1ny1_A 146 FSEYVLKETKRLGYQT-----------VFWSVAFVDWKINNQKGKKYAYDHMIKQAHPG-AIYLLHTVS----------- 202 (240)
T ss_dssp ECHHHHHHHHHTTCEE-----------BCCSBCCSCCCGGGCCCHHHHHHHHHHTCCTT-EEEEECSCS-----------
T ss_pred CCHHHHHHHHHcCCEE-----------EECcccccccCCcCCCCHHHHHHHHHhCCCCC-eEEEEcCCC-----------
Confidence 2221112222221110 001111 234567788888887777 577777631
Q ss_pred ccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeE
Q 005965 335 MTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVAL 377 (667)
Q Consensus 335 vtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtl 377 (667)
+ --.+.+++|++.+++....|
T Consensus 203 --------------------~--~t~~aL~~ii~~l~~~Gy~f 223 (240)
T 1ny1_A 203 --------------------R--DNAEALDDAITDLKKQGYTF 223 (240)
T ss_dssp --------------------T--THHHHHHHHHHHHHHHTCEE
T ss_pred --------------------h--hHHHHHHHHHHHHHHCCCEE
Confidence 0 11467888888888876554
No 347
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=21.99 E-value=1.8e+02 Score=25.07 Aligned_cols=54 Identities=9% Similarity=0.234 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 300 EVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 300 e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
+..++.|++..+.|-- +-|||.- | +||-|++.++|++.... -.+++.++..++.
T Consensus 77 ~~~~~~i~~~~~~~~~-vlvHC~a-------------G-~~RS~~~~~ayl~~~~~-----~~~~~a~~~v~~~ 130 (154)
T 2r0b_A 77 PMTKEFIDGSLQMGGK-VLVHGNA-------------G-ISRSAAFVIAYIMETFG-----MKYRDAFAYVQER 130 (154)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECSS-------------S-SSHHHHHHHHHHHHHHT-----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-EEEEcCC-------------C-CChHHHHHHHHHHHHcC-----CCHHHHHHHHHHH
Confidence 4556667666665543 4599942 4 49999999999876433 2567777877764
No 348
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=21.98 E-value=85 Score=32.18 Aligned_cols=134 Identities=21% Similarity=0.235 Sum_probs=74.5
Q ss_pred cHHHHHHHHHcCCcCchhhhHHHHHH----HHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCe-E
Q 005965 343 GSIHAKWCLAYHKENFAYEHWDEILD----ICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQ-V 417 (667)
Q Consensus 343 GSi~a~Wml~h~~ENpLYe~FD~ile----I~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQ-V 417 (667)
|.=++.|++ +...-..--+|+++. |++.-++ | -|+|.-.. +.......+.+++..+.|++ |
T Consensus 50 ~~s~a~~~~--G~pD~~~vt~~em~~~~~~I~r~~~~---------P-viaD~d~G--yg~~~~v~~~v~~l~~aGaagv 115 (298)
T 3eoo_A 50 GGGVAANSL--GIPDLGISTMDDVLVDANRITNATNL---------P-LLVDIDTG--WGGAFNIARTIRSFIKAGVGAV 115 (298)
T ss_dssp HHHHHHHTT--CCCSSSCCCHHHHHHHHHHHHHHCCS---------C-EEEECTTC--SSSHHHHHHHHHHHHHTTCSEE
T ss_pred cHHHHHHhc--CCCCCCCCCHHHHHHHHHHHHhhcCC---------e-EEEECCCC--CCCHHHHHHHHHHHHHhCCeEE
Confidence 434444543 333333344566555 4444332 3 45555443 23344555667777788998 7
Q ss_pred EeeC------CCCCC---CCchHHHHHHH---HHhcCCCCccccCccccccCCCchhHHHhHHHHHh-hhcccceeeecC
Q 005965 418 MNEG------PGHIP---MHKIPENMQKQ---LEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANI-GALGTALLCYVT 484 (667)
Q Consensus 418 MIEG------PGHVP---l~~I~~Nv~lq---k~lC~~APfYvLGPLvTDIApGYDHItsAIGaA~a-a~~GadfLCYVT 484 (667)
.||| .||.+ |--+++-+.+- +.-..+.+|++.+= ||.-... -+..||==+.+ .-+|||+|..-.
T Consensus 116 ~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~AR--TDa~~~~-gldeai~Ra~ay~~AGAD~if~~~ 192 (298)
T 3eoo_A 116 HLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMAR--TDAAAAE-GIDAAIERAIAYVEAGADMIFPEA 192 (298)
T ss_dssp EEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEE--ECTHHHH-HHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEe--ehhhhhc-CHHHHHHHHHhhHhcCCCEEEeCC
Confidence 7998 47865 44444434333 34445667877764 6654221 24556654444 457999887643
Q ss_pred cccccCCCChhHHHH
Q 005965 485 PKEHLGLPNRDDVKA 499 (667)
Q Consensus 485 PaEHLgLP~~eDVre 499 (667)
+++.|++++
T Consensus 193 ------~~~~ee~~~ 201 (298)
T 3eoo_A 193 ------MKTLDDYRR 201 (298)
T ss_dssp ------CCSHHHHHH
T ss_pred ------CCCHHHHHH
Confidence 567887764
No 349
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=21.81 E-value=2.2e+02 Score=30.54 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=53.9
Q ss_pred EeeccccCCCCCChHHHHHHHHHHHHhCCcEe-eecCCC--------CC---hHHHHHHHHhcCC-C-------------
Q 005965 223 VNANIGNSAVASSIEEEVYKVQWATMWGADTV-MDLSTG--------RH---IHETREWILRNSA-V------------- 276 (667)
Q Consensus 223 VNANIGtS~~~~~ieeEveKl~~A~~~GADtV-MDLSTG--------gd---i~~~R~~Il~nsp-v------------- 276 (667)
|-+|||-+.++.+..++..+....+.--||.| ..+|.- .| +.++=+++.+... +
T Consensus 184 vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~ 263 (415)
T 3i65_A 184 VGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWF 263 (415)
T ss_dssp EEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCC
T ss_pred EEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccccccccccc
Confidence 34588888877666666655554444347765 234421 22 2222233332210 0
Q ss_pred -Ccccch-hhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEecccc
Q 005965 277 -PVGTVP-IYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVL 324 (667)
Q Consensus 277 -PVGTVP-IYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~ 324 (667)
.-.++| |+ .|. .-+++.+++.+..+.-.+.|+|.+++|-...
T Consensus 264 ~~~~~~P~V~---VKi---~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 264 NTTKKKPLVF---VKL---APDLNQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SSSSSCCEEE---EEE---CSCCCHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred ccCCCCCeEE---EEe---cCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 001345 32 222 3577888888888877889999999998654
No 350
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=21.57 E-value=6.4e+02 Score=25.49 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=83.9
Q ss_pred eeEeeccccCCCCCChHHHHHHHHHHHHh-CCcEeeecCCCCChH--------HHHHHHHhcCCCCcccchhhhHHHHhc
Q 005965 221 VKVNANIGNSAVASSIEEEVYKVQWATMW-GADTVMDLSTGRHIH--------ETREWILRNSAVPVGTVPIYQALEKVD 291 (667)
Q Consensus 221 tKVNANIGtS~~~~~ieeEveKl~~A~~~-GADtVMDLSTGgdi~--------~~R~~Il~nspvPVGTVPIYqAl~k~~ 291 (667)
+.+++.+|- .+.++-+++++.+++. |-.++ -+-.|.+.. ++|+.+=.. ++| ...++
T Consensus 129 v~~~~~~~~----~~~~~~~~~a~~~~~~~G~~~~-K~K~g~~~~~~d~~~v~avR~a~g~~-------~~l---~vDan 193 (367)
T 3dg3_A 129 MRVSHMLGF----DDPVKMVAEAERIRETYGINTF-KVKVGRRPVQLDTAVVRALRERFGDA-------IEL---YVDGN 193 (367)
T ss_dssp EEEEEEEES----SCHHHHHHHHHHHHHHHCCCEE-EEECCCSSTHHHHHHHHHHHHHHGGG-------SEE---EEECT
T ss_pred EEEEEEecC----CCHHHHHHHHHHHHHhcCccEE-EEeeCCChhhhHHHHHHHHHHHhCCC-------CEE---EEECC
Confidence 445555553 3567777888888887 87765 354454321 222222111 111 00112
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCch-hhhHHHHHHHH
Q 005965 292 GIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFA-YEHWDEILDIC 370 (667)
Q Consensus 292 g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpL-Ye~FD~ileI~ 370 (667)
...|.++-.+.+.+-.+.|++|+- -|+ ..+++.+-++.
T Consensus 194 ---~~~~~~~a~~~~~~l~~~~i~~iE--------------------------------------qP~~~~d~~~~~~l~ 232 (367)
T 3dg3_A 194 ---RGWSAAESLRAMREMADLDLLFAE--------------------------------------ELCPADDVLSRRRLV 232 (367)
T ss_dssp ---TCSCHHHHHHHHHHTTTSCCSCEE--------------------------------------SCSCTTSHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHhCCCEEE--------------------------------------CCCCcccHHHHHHHH
Confidence 234566666655555556777763 132 23567777777
Q ss_pred hHhceeEeccCCCCCCCccC--------C-----CcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHH
Q 005965 371 NQYDVALSIGDGLRPGSIYD--------A-----NDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQ 437 (667)
Q Consensus 371 k~YDVtlSLGDGLRPG~iaD--------A-----~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lq 437 (667)
++.++-+.+|..+.- ..| + -|.... -|...-+++..|.++|++||+ ||+.-.-|-...-+|
T Consensus 233 ~~~~iPIa~dE~~~~--~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~---~~~~es~i~~aa~~h 306 (367)
T 3dg3_A 233 GQLDMPFIADESVPT--PADVTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLGLDMVM---GNQIDGQIGTACTVS 306 (367)
T ss_dssp HHCSSCEEECTTCSS--HHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEE---CCSSCCHHHHHHHHH
T ss_pred HhCCCCEEecCCcCC--HHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEE---CCcCCcHHHHHHHHH
Confidence 888888887765531 000 0 122222 333344677889999999997 455444455444444
Q ss_pred H
Q 005965 438 L 438 (667)
Q Consensus 438 k 438 (667)
.
T Consensus 307 l 307 (367)
T 3dg3_A 307 F 307 (367)
T ss_dssp H
T ss_pred H
Confidence 4
No 351
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=21.46 E-value=52 Score=32.60 Aligned_cols=109 Identities=9% Similarity=0.020 Sum_probs=65.7
Q ss_pred cccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHH--------hHhceeEe-ccCCCCCCCccCCCcHHHHHHHHHHH
Q 005965 334 RMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDIC--------NQYDVALS-IGDGLRPGSIYDANDTAQFAELLTQG 404 (667)
Q Consensus 334 RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~--------k~YDVtlS-LGDGLRPG~iaDA~D~AQ~~EL~~LG 404 (667)
+++++++|--+- +++......-+.|+.|+++++.+ .+.|+++- .-+.+ =.
T Consensus 29 ~lvav~d~~~~~--~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~-------------------H~ 87 (318)
T 3oa2_A 29 CLVSAYDINDSV--GIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYL-------------------HY 87 (318)
T ss_dssp EEEEEECSSCCC--GGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGG-------------------HH
T ss_pred EEEEEEcCCHHH--HHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHH-------------------HH
Confidence 445555443321 12223333457899999999754 34565442 21111 15
Q ss_pred HHHHHHHhcCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCchhHHHhH
Q 005965 405 ELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAI 467 (667)
Q Consensus 405 EL~krA~e~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYDHItsAI 467 (667)
++++.|-++|.-|++|-|-=.-+.+.++=+++.++ ++..+++-= ..=-.|.|-.+-..|
T Consensus 88 ~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~--~g~~~~v~~--~~R~~p~~~~~k~~i 146 (318)
T 3oa2_A 88 PHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERE--TDKRLYNIL--QLRHHQAIIALKDKV 146 (318)
T ss_dssp HHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH--HTCCEEECC--GGGGCHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH--hCCEEEEEE--hhhcCHHHHHHHHHH
Confidence 78899999999999999988888888888887777 355654421 122334444444444
No 352
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=21.19 E-value=84 Score=32.38 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=0.0
Q ss_pred ccCCCcHHHHHHHHHHHHHHHHHHhcCCe-EEeeC------CCCCC---CCchHHHHHHHHHhcC-----CCCccccCcc
Q 005965 388 IYDANDTAQFAELLTQGELTRRAWDKDVQ-VMNEG------PGHIP---MHKIPENMQKQLEWCN-----EAPFYTLGPL 452 (667)
Q Consensus 388 iaDA~D~AQ~~EL~~LGEL~krA~e~gVQ-VMIEG------PGHVP---l~~I~~Nv~lqk~lC~-----~APfYvLGPL 452 (667)
|+|.-.. |.......+.+++..+.|++ |.||+ .||.+ |--+++-+.+-+..+. +.+|++.+=
T Consensus 92 iaD~d~G--yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~AR- 168 (307)
T 3lye_A 92 IADMDTG--YGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIAR- 168 (307)
T ss_dssp EEECTTC--SSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEE-
T ss_pred EEECCCC--CCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEe-
Q ss_pred ccccCCCchhHHHhHHHHHh-hhcccceeeecCcccccCCCChhHHHH
Q 005965 453 TTDIAPGYDHITSAIGAANI-GALGTALLCYVTPKEHLGLPNRDDVKA 499 (667)
Q Consensus 453 vTDIApGYDHItsAIGaA~a-a~~GadfLCYVTPaEHLgLP~~eDVre 499 (667)
||.-...+ +..||==+.+ .-+|||+|.. -++++.+++++
T Consensus 169 -TDa~~~~g-ldeAi~Ra~ay~eAGAD~ifi------~~~~~~~~~~~ 208 (307)
T 3lye_A 169 -TDALQSLG-YEECIERLRAARDEGADVGLL------EGFRSKEQAAA 208 (307)
T ss_dssp -ECCHHHHC-HHHHHHHHHHHHHTTCSEEEE------CCCSCHHHHHH
T ss_pred -chhhhccC-HHHHHHHHHHHHHCCCCEEEe------cCCCCHHHHHH
No 353
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=21.12 E-value=1.5e+02 Score=31.96 Aligned_cols=216 Identities=19% Similarity=0.265 Sum_probs=124.0
Q ss_pred eEeecCCceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEeeecCCC-----CChHHHHHHHHhc-CCCCcccchhhhH
Q 005965 213 MIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTG-----RHIHETREWILRN-SAVPVGTVPIYQA 286 (667)
Q Consensus 213 ~~IG~gl~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtVMDLSTG-----gdi~~~R~~Il~n-spvPVGTVPIYqA 286 (667)
+.||-+--+-|-.= |..++.|++.=++....-.++|+|-|= ++.- ..|.+||+++.+. ++||+=
T Consensus 16 v~IGG~~PI~VQSM--tnT~T~Dv~aTv~QI~~L~~aG~eiVR-vaVp~~~~A~al~~I~~~l~~~~~~vPLV------- 85 (406)
T 4g9p_A 16 VPIGGAHPIAVQSM--TNTPTRDVEATTAQVLELHRAGSEIVR-LTVNDEEAAKAVPEIKRRLLAEGVEVPLV------- 85 (406)
T ss_dssp EEESTTSCCEEEEE--CCSCTTCHHHHHHHHHHHHHHTCSEEE-EECCSHHHHHHHHHHHHHHHHTTCCCCEE-------
T ss_pred EeeCCCCceeeeec--CCCCcccHHHHHHHHHHHHHcCCCEEE-EecCCHHHHHhHHHHHHHHHhcCCCCceE-------
Confidence 34444444444321 345778999999999999999999663 3333 3467788887765 566641
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHH
Q 005965 287 LEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEI 366 (667)
Q Consensus 287 l~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~i 366 (667)
++ ..++....+..+ +.+++|||-+-|-.|= ... | | ..=++|.++
T Consensus 86 -----AD-iHF~~~~al~a~-~~~a~~~dkiRINPGN-ig~--------------~------~--------k~~e~~~~v 129 (406)
T 4g9p_A 86 -----GD-FHFNGHLLLRKY-PKMAEALDKFRINPGT-LGR--------------G------R--------HKDEHFAEM 129 (406)
T ss_dssp -----EE-CCSSHHHHHHHC-HHHHHHCSEEEECTTS-SCS--------------T------H--------HHHHHHHHH
T ss_pred -----ee-ecccHHHHHHHH-HHHHhHHhhcccCccc-cCc--------------c------c--------cHHHHHHHH
Confidence 11 123333333322 3466799999888882 100 0 0 002679999
Q ss_pred HHHHhHhceeEeccCCCCCCCccCCCcHHHHH--------------------HHHHHHH--HHHHHHhcCC---eEEeeC
Q 005965 367 LDICNQYDVALSIGDGLRPGSIYDANDTAQFA--------------------ELLTQGE--LTRRAWDKDV---QVMNEG 421 (667)
Q Consensus 367 leI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~--------------------EL~~LGE--L~krA~e~gV---QVMIEG 421 (667)
++.|++|++.+=+| .=-||+ |...++ |-++-.- -++++.+.|. +++|-=
T Consensus 130 v~~ak~~~~pIRIG--VN~GSL----~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~ 203 (406)
T 4g9p_A 130 IRIAMDLGKPVRIG--ANWGSL----DPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSA 203 (406)
T ss_dssp HHHHHHHTCCEEEE--EEGGGC----CHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHccCCceec--cccccc----cHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEe
Confidence 99999999986554 223444 433322 3222222 2566666664 444432
Q ss_pred CCCCCCCchHHHHHHHHHhcCCCCccccCccccccCCCch-hHHHhH--HHHHhhhcccceeeecCc
Q 005965 422 PGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYD-HITSAI--GAANIGALGTALLCYVTP 485 (667)
Q Consensus 422 PGHVPl~~I~~Nv~lqk~lC~~APfYvLGPLvTDIApGYD-HItsAI--GaA~aa~~GadfLCYVTP 485 (667)
=-+=+...|+++-.|.++ |+ .|+.+ | +|--+++++ -|-||| |..+.---|=-+-.-+|+
T Consensus 204 KaSdv~~~i~aYr~la~~-~d-yPLHL-G--vTEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~ 265 (406)
T 4g9p_A 204 KVSKARDLVWVYRELARR-TQ-APLHL-G--LTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTP 265 (406)
T ss_dssp ECSSHHHHHHHHHHHHHH-CC-SCBEE-C--CTTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCC
T ss_pred ecCCHHHHHHHHHHHHHh-CC-CCcee-e--eecCCCcccceechHHHHHHHHhccCchhEEeeccC
Confidence 223355678888888776 64 56543 3 577777777 444554 444555555555455553
No 354
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=20.90 E-value=3.5e+02 Score=27.99 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccc
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGV 323 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv 323 (667)
.+.|.+.+.+++..++|...+=+..|.
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~ 189 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGG 189 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 478999999999999999999888773
No 355
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=20.89 E-value=3.2e+02 Score=26.52 Aligned_cols=30 Identities=7% Similarity=0.040 Sum_probs=21.8
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcC
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNS 274 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~ns 274 (667)
++.+++.|+|.|| |.-=.+..++| ++.+..
T Consensus 84 i~~~l~~g~~gI~-~P~V~s~~ev~-~~~~~~ 113 (256)
T 1dxe_A 84 IKRLLDIGFYNFL-IPFVETKEEAE-LAVAST 113 (256)
T ss_dssp HHHHHHTTCCEEE-ESCCCSHHHHH-HHHHTT
T ss_pred HHHHHhcCCceee-ecCcCCHHHHH-HHHHHh
Confidence 7788899999999 66666777774 344444
No 356
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=20.87 E-value=98 Score=31.59 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=30.1
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchh
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 283 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPI 283 (667)
++.|+++|||-|-|.|-+. ..++-+ +++...+|+--.++
T Consensus 110 a~aAl~aGa~iINdVsg~~-d~~m~~-~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 110 MRAALAAGADLINDIWGFR-QPGAID-AVRDGNSGLCAMHM 148 (294)
T ss_dssp HHHHHHHTCSEEEETTTTC-STTHHH-HHSSSSCEEEEECC
T ss_pred HHHHHHcCCCEEEECCCCC-chHHHH-HHHHhCCCEEEECC
Confidence 6678888999999998775 555544 56778888877765
No 357
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=20.73 E-value=63 Score=32.82 Aligned_cols=61 Identities=28% Similarity=0.411 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 005965 241 YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTI 319 (667)
Q Consensus 241 eKl~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt~e~~~d~ieeQAeqGVDfmTI 319 (667)
+.++.|.++|||-|| |-. -+...+|+.+=... |.+|+.- .|| +|. +.+.+-++.||||+.+
T Consensus 207 eea~eA~~aGaD~I~-ld~-~~~~~~k~av~~v~----~~ipi~A----sGG----It~----eni~~~a~tGvD~IsV 267 (286)
T 1x1o_A 207 EELEEALEAGADLIL-LDN-FPLEALREAVRRVG----GRVPLEA----SGN----MTL----ERAKAAAEAGVDYVSV 267 (286)
T ss_dssp HHHHHHHHHTCSEEE-EES-CCHHHHHHHHHHHT----TSSCEEE----ESS----CCH----HHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHcCCCEEE-ECC-CCHHHHHHHHHHhC----CCCeEEE----EcC----CCH----HHHHHHHHcCCCEEEE
Confidence 345567789999997 322 24455554432211 2445422 133 343 5667778999999988
No 358
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=20.72 E-value=7e+02 Score=25.62 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEeccccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhce-
Q 005965 297 LSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDV- 375 (667)
Q Consensus 297 lt~e~~~d~ieeQAeqGVDfmTIHaGv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDV- 375 (667)
++++++.+.++.-.+.|+.+..||+=+--..... ..|.. ..++|.+++++++++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~Gl~~H~gs~~~~~----------------~~~~~-------~~~~~~~~~~~~~~~G~~ 228 (425)
T 1f3t_A 172 AKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDA----------------STFAQ-------AISDSRFVFDMGTELGFN 228 (425)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCCCSCCSCT----------------HHHHH-------HHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhCCCeEEEEEEeCCCCCCCH----------------HHHHH-------HHHHHHHHHHHHHHcCCC
Confidence 4567777766665556899888877432111000 01211 14557888899998876
Q ss_pred --eEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHH--hcCCeEEeeCCCC
Q 005965 376 --ALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAW--DKDVQVMNEGPGH 424 (667)
Q Consensus 376 --tlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~--e~gVQVMIEGPGH 424 (667)
.+++|-|+ ||.-.+..|...+.+++.-+ .+... +.|+++++| ||.
T Consensus 229 ~~~l~iGGG~-~~~~~~~~~~~~~~~~vr~~--i~~~~~~~~~~~l~~E-pGR 277 (425)
T 1f3t_A 229 MHILDIGGGF-PGTRDAPLKFEEIAGVINNA--LEKHFPPDLKLTIVAE-PGR 277 (425)
T ss_dssp CCEEECCCCC-CSSTTSSSCHHHHHHHHHHH--HHHHSCCCTTCEEEEC-CSH
T ss_pred CCEEEeCCCc-CCCCCCCCCHHHHHHHHHHH--HHHhcCcCCCcEEEEe-CCc
Confidence 47889999 44211122333343333221 11111 125777777 664
No 359
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=20.69 E-value=1.4e+02 Score=26.58 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=56.9
Q ss_pred HHhCCcEeeecCCCCChHHH--HHHHHhcCCCCcccchhhhHHHHhcCCCCCC--CHHHHHHHHHHHHhc-CCCEEEEec
Q 005965 247 TMWGADTVMDLSTGRHIHET--REWILRNSAVPVGTVPIYQALEKVDGIAENL--SWEVFRDTLIEQAEQ-GVDYFTIHA 321 (667)
Q Consensus 247 ~~~GADtVMDLSTGgdi~~~--R~~Il~nspvPVGTVPIYqAl~k~~g~~~~l--t~e~~~d~ieeQAeq-GVDfmTIHa 321 (667)
.++|..+|.+|......... -....+...+-.=.+|+-+ ....++ ..+.+.+.|++..++ |-- +-|||
T Consensus 50 ~~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D------~~~~~~~~~~~~~~~~i~~~~~~~~~~-VlVHC 122 (183)
T 3f81_A 50 QKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND------TQEFNLSAYFERAADFIDQALAQKNGR-VLVHC 122 (183)
T ss_dssp HHHTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCC------STTSCGGGGHHHHHHHHHHHHHSTTCC-EEEEC
T ss_pred HHCCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCC------CCcccHHHHHHHHHHHHHHHHHcCCCe-EEEEC
Confidence 47999999999876541100 0000111111111222211 112222 246677788877776 433 46999
Q ss_pred cccccccccccCcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHh
Q 005965 322 GVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQY 373 (667)
Q Consensus 322 Gv~~~~l~~~~~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~Y 373 (667)
. .| +||-|+++++|++....- .+++.++..++.
T Consensus 123 ~---------~G-----~~RSg~~v~ayLm~~~~~-----~~~~A~~~v~~~ 155 (183)
T 3f81_A 123 R---------EG-----YSRSPTLVIAYLMMRQKM-----DVKSALSIVRQN 155 (183)
T ss_dssp S---------SS-----SSHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH
T ss_pred C---------CC-----cchHHHHHHHHHHHHhCC-----CHHHHHHHHHHc
Confidence 4 22 699999999998875433 567777777753
No 360
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=20.64 E-value=1.1e+02 Score=30.30 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=52.2
Q ss_pred hhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCCCCC---------chH
Q 005965 361 EHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMH---------KIP 431 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHVPl~---------~I~ 431 (667)
..+++||+|+++|+|..++== +|.. +...-+++++..+.|..+-.-|=-|..+. +|.
T Consensus 81 ~~~~~ll~iL~~~~v~aTfFv---~g~~-----------~~~~p~~v~~i~~~GheIg~Ht~~H~~~~~~s~~~~~~ei~ 146 (308)
T 3cl6_A 81 AGVWRILKLFKAFDIPLTIFA---VAMA-----------AQRHPDVIRAMVAAGHEICSHGYRWIDYQYMDEAQEREHML 146 (308)
T ss_dssp THHHHHHHHHHHTTCCCEEEE---CHHH-----------HHHCHHHHHHHHHTTCEEEECCSSSSCCTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEe---EHHH-----------HHHCHHHHHHHHHcCCEEEeCCCCCcccccCCHHHHHHHHH
Confidence 358899999999998544310 1111 12345789999999999999998898764 566
Q ss_pred HHHHHHHHhcCCCCc
Q 005965 432 ENMQKQLEWCNEAPF 446 (667)
Q Consensus 432 ~Nv~lqk~lC~~APf 446 (667)
.+.+.-+++++..|.
T Consensus 147 ~~~~~l~~~~G~~p~ 161 (308)
T 3cl6_A 147 EAIRILTELTGERPL 161 (308)
T ss_dssp HHHHHHHHHHSSCCS
T ss_pred HHHHHHHHHhCCCcc
Confidence 677777788888885
No 361
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.61 E-value=1.3e+02 Score=29.62 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=61.5
Q ss_pred CcccCccccccHHHHHHHHHcCCcCchhhhHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHh
Q 005965 333 KRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWD 412 (667)
Q Consensus 333 ~RvtgIVSRGGSi~a~Wml~h~~ENpLYe~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e 412 (667)
-++++|++|--.-..++...++-.-..|+.++++++= .+.|+++-. +-...- .++++.|-+
T Consensus 28 ~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~-~~~D~V~i~------------tp~~~h------~~~~~~al~ 88 (344)
T 3mz0_A 28 AEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLAD-ENVDAVLVT------------SWGPAH------ESSVLKAIK 88 (344)
T ss_dssp EEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHC-TTCCEEEEC------------SCGGGH------HHHHHHHHH
T ss_pred cEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcC-CCCCEEEEC------------CCchhH------HHHHHHHHH
Confidence 3677888887666666655555334678899988762 246766642 111111 355667889
Q ss_pred cCCeEEeeCCCCCCCCchHHHHHHHHHhcCCCCc
Q 005965 413 KDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPF 446 (667)
Q Consensus 413 ~gVQVMIEGPGHVPl~~I~~Nv~lqk~lC~~APf 446 (667)
+|.-|++|-|--.-+.+.++=+++.++ ++.+|
T Consensus 89 ~Gk~vl~EKP~a~~~~e~~~l~~~a~~--~g~~~ 120 (344)
T 3mz0_A 89 AQKYVFCEKPLATTAEGCMRIVEEEIK--VGKRL 120 (344)
T ss_dssp TTCEEEECSCSCSSHHHHHHHHHHHHH--HSSCC
T ss_pred CCCcEEEcCCCCCCHHHHHHHHHHHHH--HCCEE
Confidence 999999999977777777777776665 44555
No 362
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=20.42 E-value=75 Score=34.20 Aligned_cols=44 Identities=11% Similarity=0.078 Sum_probs=36.0
Q ss_pred eEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 376 ALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 376 tlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
.++.--..||-+|.-..+..|++++ ++.|+++|+.|.|.|-||-
T Consensus 37 r~~~~~~~~P~~vv~P~s~~dV~~~------v~~a~~~~~~v~vrGgGh~ 80 (495)
T 3fw9_A 37 LFQNSLISKPSAIILPGSKEELSNT------IRCIRKGSWTIRLRSGGHS 80 (495)
T ss_dssp GGCSTTSCCCSEEECCCSHHHHHHH------HHHHHTSSCEEEEESSCCC
T ss_pred ccccccCCCCCEEEecCCHHHHHHH------HHHHHHcCCeEEEECCCcC
Confidence 3333345799999999999998875 5678999999999999994
No 363
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=20.36 E-value=1.7e+02 Score=28.28 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=48.4
Q ss_pred hHHHHHHHHhHhceeEeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCC--CCCC---------ch
Q 005965 362 HWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGH--IPMH---------KI 430 (667)
Q Consensus 362 ~FD~ileI~k~YDVtlSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGH--VPl~---------~I 430 (667)
..++|++|+++|+|..++ ++=.|.-.+.+ .. +++++..+.|..+..-+=-| ..+. +|
T Consensus 40 ~t~~il~iL~~~~v~ATF--~Fv~g~~~~~~-p~---------~~~~~i~~~GheIg~Ht~~H~~~~l~~ls~~~~~~ei 107 (254)
T 2vyo_A 40 VTDRILNTLDELGVKATF--SFTVNQKAVGN-VG---------QLYRRAVEEGHNVALRVDPSMDEGYQCLSQDALENNV 107 (254)
T ss_dssp HHHHHHHHHHHHTCCCEE--EECCSSCCCGG-GT---------HHHHHHHHTTCEEEEECCGGGTTCGGGSCHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEE--EEccChHHhHC-HH---------HHHHHHHhCCCEEEecCCCCCCcCcccCCHHHHHHHH
Confidence 457899999999997666 11122222211 10 38888899999999999999 6664 34
Q ss_pred HHHHHHHHHhcCCCCccc
Q 005965 431 PENMQKQLEWCNEAPFYT 448 (667)
Q Consensus 431 ~~Nv~lqk~lC~~APfYv 448 (667)
..+.+.-+++++..|-|.
T Consensus 108 ~~~~~~l~~~~G~~~~~f 125 (254)
T 2vyo_A 108 DREIDTIDGLSGTEIRYA 125 (254)
T ss_dssp HHHHHHHHHHHTSCCCEE
T ss_pred HHHHHHHHHHHCCCCeEE
Confidence 445555566666666544
No 364
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=20.31 E-value=1.2e+02 Score=31.46 Aligned_cols=98 Identities=18% Similarity=0.125 Sum_probs=64.0
Q ss_pred CceeEeeccccCCCCCChHHHHHHHHHHHHhCCcEe---eecCC--C---CChHHHHHHHHhcCCCCcccchhhhHHHHh
Q 005965 219 FLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTV---MDLST--G---RHIHETREWILRNSAVPVGTVPIYQALEKV 290 (667)
Q Consensus 219 l~tKVNANIGtS~~~~~ieeEveKl~~A~~~GADtV---MDLST--G---gdi~~~R~~Il~nspvPVGTVPIYqAl~k~ 290 (667)
-.|||-+=||=.......+.-+...+.|++.|||-| |++.- . ||.+.+++.|-.-..+- |.++ -|+
T Consensus 82 s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~-~~~~-----lKV 155 (297)
T 4eiv_A 82 AGIKVCAAVNFPEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVV-GPKT-----LKV 155 (297)
T ss_dssp GGSEEEEEESTTTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHH-TTSE-----EEE
T ss_pred CCCeEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHh-cCCc-----eEE
Confidence 357888888877778889999999999999999764 55421 1 56777777654322111 2111 122
Q ss_pred cCCCCCCCHHH-HHHHHHHHHhcCCCEEEEecc
Q 005965 291 DGIAENLSWEV-FRDTLIEQAEQGVDYFTIHAG 322 (667)
Q Consensus 291 ~g~~~~lt~e~-~~d~ieeQAeqGVDfmTIHaG 322 (667)
-=..-.|+.++ +...-+--.+.|.||+=-=.|
T Consensus 156 IlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTG 188 (297)
T 4eiv_A 156 VLSGGELQGGDIISRAAVAALEGGADFLQTSSG 188 (297)
T ss_dssp ECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred EEecccCCcHHHHHHHHHHHHHhCCCEEEcCCC
Confidence 11224677666 677777778899999855444
No 365
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=20.19 E-value=1.4e+02 Score=30.14 Aligned_cols=72 Identities=14% Similarity=0.254 Sum_probs=44.5
Q ss_pred HHHHHHhCCcEeeecCCCCChHHHHHHHHhcCCCCcccchhhhHHHHhcCCCCCCC------------HHHHHHHHHHHH
Q 005965 243 VQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLS------------WEVFRDTLIEQA 310 (667)
Q Consensus 243 l~~A~~~GADtVMDLSTGgdi~~~R~~Il~nspvPVGTVPIYqAl~k~~g~~~~lt------------~e~~~d~ieeQA 310 (667)
++.|+++|||-|-|.|-+ +.+++-+ +++...+|+--.+. .|.+.+|. -+.|.+.+++-.
T Consensus 103 a~aAl~aGa~iINdvsg~-~d~~~~~-~~a~~~~~vVlmh~-------~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~ 173 (282)
T 1aj0_A 103 IRESAKVGAHIINDIRSL-SEPGALE-AAAETGLPVCLMHM-------QGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE 173 (282)
T ss_dssp HHHHHHTTCCEEEETTTT-CSTTHHH-HHHHHTCCEEEECC-------SSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC-CCHHHHH-HHHHhCCeEEEEcc-------CCCCccccccCccchHHHHHHHHHHHHHHHHH
Confidence 567888999999999877 6666655 44566777765554 12222221 344555555555
Q ss_pred hcCCC--EEEEeccc
Q 005965 311 EQGVD--YFTIHAGV 323 (667)
Q Consensus 311 eqGVD--fmTIHaGv 323 (667)
+.||+ =+-+=.|+
T Consensus 174 ~~Gi~~~~IilDPg~ 188 (282)
T 1aj0_A 174 QAGIAKEKLLLDPGF 188 (282)
T ss_dssp HTTCCGGGEEEECCT
T ss_pred HcCCChhhEEEeCCC
Confidence 67887 33444544
No 366
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=20.14 E-value=1.1e+02 Score=29.39 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=36.8
Q ss_pred hhHHHHHHHHhHhceeEeccC-CCCCCCc---cCCCcHHHHHHHHHHHHHHHHHHhcCCeEEe
Q 005965 361 EHWDEILDICNQYDVALSIGD-GLRPGSI---YDANDTAQFAELLTQGELTRRAWDKDVQVMN 419 (667)
Q Consensus 361 e~FD~ileI~k~YDVtlSLGD-GLRPG~i---aDA~D~AQ~~EL~~LGEL~krA~e~gVQVMI 419 (667)
...++|.+.+++ +..+-+|. |+|+|.+ -|-.. ..-.+...+-+..+.|.+.|.-|+|
T Consensus 109 ~~~~~l~~~~~~-~~~~gige~G~~~g~i~~~ld~~~-~~~~q~~~~~~~~~lA~~~~~pv~i 169 (314)
T 2vc7_A 109 RSIDEIADLFIH-DIKEGIQGTLNKAGFVKIAADEPG-ITKDVEKVIRAAAIANKETKVPIIT 169 (314)
T ss_dssp CCHHHHHHHHHH-HHHTCSSSSSCCCCSEEEECCTTC-SCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred cCHHHHHHHHHH-HHHhhcccCCCCCCeEEEeecCCC-CCHHHHHHHHHHHHHHHHHCCEEEE
Confidence 346788887764 44556775 7899875 23221 1123445566677788889999998
No 367
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=20.10 E-value=73 Score=34.63 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=35.8
Q ss_pred EeccCCCCCCCccCCCcHHHHHHHHHHHHHHHHHHhcCCeEEeeCCCCC
Q 005965 377 LSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHI 425 (667)
Q Consensus 377 lSLGDGLRPG~iaDA~D~AQ~~EL~~LGEL~krA~e~gVQVMIEGPGHV 425 (667)
+|.---.||-+|.-..+..++++++ +.|+++|+++.|.|-||-
T Consensus 46 w~~~~~~~P~~vv~P~s~~dV~~~v------~~a~~~~~~v~vrggGh~ 88 (518)
T 3vte_A 46 FISDTTPKPLVIVTPSNNSHIQATI------LCSKKVGLQIRTRSGGHD 88 (518)
T ss_dssp GCSSSSCCCSEEECCCSHHHHHHHH------HHHHHHTCEEEEESSCCC
T ss_pred cccccCCCCCEEEEeCCHHHHHHHH------HHHHHcCCcEEEECCCcC
Confidence 3334457999999999999988764 668899999999999994
No 368
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=20.01 E-value=62 Score=34.24 Aligned_cols=26 Identities=12% Similarity=0.135 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEec
Q 005965 296 NLSWEVFRDTLIEQAEQGVDYFTIHA 321 (667)
Q Consensus 296 ~lt~e~~~d~ieeQAeqGVDfmTIHa 321 (667)
-++.+.+.+.|..-|.-....|-+|-
T Consensus 18 f~~~~~ik~~ID~mA~~KlN~lH~HL 43 (434)
T 2yl6_A 18 YFSPEQLKEIIDKAKHYGYTDLHLLV 43 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 36889999999999999999998885
Done!